RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NAA60 (Homo sapiens)

Ensembl gene IDs: ENSG00000122390

Ensembl transcript IDs: ENST00000360862.9, ENST00000407558.9, ENST00000414063.6, ENST00000421765.7, ENST00000424546.6, ENST00000570372.5, ENST00000570551.5, ENST00000570819.5, ENST00000571107.5, ENST00000571696.6, ENST00000571798.1, ENST00000572131.5, ENST00000572169.6, ENST00000572584.2, ENST00000572739.5, ENST00000572757.5, ENST00000572942.5, ENST00000573201.6, ENST00000573345.5, ENST00000573580.5, ENST00000573593.5, ENST00000573617.1, ENST00000574256.1, ENST00000574328.5, ENST00000574380.5, ENST00000574762.1, ENST00000574950.5, ENST00000575076.5, ENST00000575733.5, ENST00000575754.1, ENST00000575936.5, ENST00000576787.5, ENST00000576819.1, ENST00000576916.5, ENST00000577013.6, ENST00000648681.1, ENST00000649205.1, ENST00000649360.1

Found 1390 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCATGGCGCGGCCCTCCTGCCAGCACCGTCAAGGAGGGGGATGCTaGTCCTGCCTGGTGCCTGCCTTCATTCTGAGGGCCCCTGGCCCC +
Preference number: 1 (lower is better)
Translates to: SMARPSCQHRQGGGC*SCLVPAFILRAPGP
Trigger: GGGGCCAGGGGCCCTCAGAATGAAGGCAGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCATGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 90 bp GTCAGCATGGCGCGGCCCTCCTGCCAGCACCGTCAAGGAGGGGGATaGTGCTCCTGCCTGGTGCCTGCCTTCATTCTGAGGGCCCCTGGC +
Preference number: 1 (lower is better)
Translates to: VSMARPSCQHRQGGG*CSCLVPAFILRAPG
Trigger: GCCAGGGGCCCTCAGAATGAAGGCAGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCATGCTGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 90 bp TGCCCACCCCACACCCTGCCTATGGGCCACACAGCTGGGCCTGGGTaGTCCAGGAGCATGAGCCCTTCTCCAGGCCATGGTGTCTGCCTG +
Preference number: 1 (lower is better)
Translates to: CPPHTLPMGHTAGPG*SRSMSPSPGHGVCL
Trigger: CAGGCAGACACCATGGCCTGGAGAAGGGCTCATGCTCCTGGAGCACCCAGGCCCAGCTGTGTGGCCCATAGGCAGGGTGTGGGGTGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR CCA 90 bp CCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTaGGAGAGGCCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCC +
Preference number: 1 (lower is better)
Translates to: PLQLSRKELQEQAAE*ERPSEGRPLPVNAA
Trigger: GGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR CCA 90 bp AGCTGGGCCTGGGTGCTCCAGGAGCATGAGCCCTTCTCCAGGCCATaGTGTCTGCCTGCAGCCACTAGGCGCCTCTCGGTCCCCACACAA +
Preference number: 1 (lower is better)
Translates to: SWAWVLQEHEPFSRP*CLPAATRRLSVPTQ
Trigger: TTGTGTGGGGACCGAGAGGCGCCTAGTGGCTGCAGGCAGACACCATGGCCTGGAGAAGGGCTCATGCTCCTGGAGCACCCAGGCCCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR CCA 90 bp AGCTGCAGAGCAGGCTGTGGGCCTGGCGGTAGACTCTGTGCGGAATaGAGCAGGGGCTCAGGCTGGCTAGTGCAGAGCCCAGGTGCTGGA +
Preference number: 1 (lower is better)
Translates to: SCRAGCGPGGRLCAE*SRGSGWLVQSPGAG
Trigger: TCCAGCACCTGGGCTCTGCACTAGCCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCTACCGCCAGGCCCACAGCCTGCTCTGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
3UTR CCA 90 bp ACCCAAGGAGTCTCGGCGATGCCTGTCCTCAGCAGGTCAGCTGAATaGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCAC +
Preference number: 1 (lower is better)
Translates to: TQGVSAMPVLSRSAE*SMPRSDGQCDLPGH
Trigger: GTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCGCCGAGACTCCTTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 90 bp GAGTCTCGGCGATGCCTGTCCTCAGCAGGTCAGCTGAATGGAGCATaGCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAAC +
Preference number: 1 (lower is better)
Translates to: ESRRCLSSAGQLNGA*QGPTGSVTSQGTGN
Trigger: GTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCGCCGAGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR CCA 90 bp GGAGCTGAAGAGCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCG +
Preference number: 1 (lower is better)
Translates to: GAEEPLCLLWRTCHG*ACSAHAHDVLFPSP
Trigger: CGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTTCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
3UTR CCA 90 bp CTTGGCACAAGTCACCAAACCTCTGGGCTGTGCTGGTGCATAAGGTaGTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTC +
Preference number: 1 (lower is better)
Translates to: LGTSHQTSGLCWCIR*WTLQSPRPLPALPF
Trigger: GAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCACCTTATGCACCAGCACAGCCCAGAGGTTTGGTGACTTGTGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 90 bp GAAGAGCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATaGTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGC +
Preference number: 1 (lower is better)
Translates to: EEPLCLLWRTCHGWA*SAHAHDVLFPSPCS
Trigger: GCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
3UTR GCA 90 bp CCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATaGTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGC +
Preference number: 1 (lower is better)
Translates to: PIPLCLLWRTCHGWA*SAHAHDVLFPSPCS
Trigger: GCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR CCA 90 bp CAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCG +
Preference number: 1 (lower is better)
Translates to: QAPIPLCLLWRTCHG*ACSAHAHDVLFPSP
Trigger: CGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR CCA 90 bp CCGGCTCTGCCGTTCTCTGTGCCCATCCAGGGCCTTCCACTTTTGTaGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCG +
Preference number: 1 (lower is better)
Translates to: PALPFSVPIQGLPLL*LEAPSSHTFVSAVA
Trigger: CGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR GCA 90 bp TCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTaGTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCC +
Preference number: 1 (lower is better)
Translates to: STFVAGGTKLPYLCV*CGVPATDGHALRMP
Trigger: GGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR CCA 90 bp TGCCCAGCCGACATCACATGGTCCGGCTGTACTCGATGCCACTCTTaGAAGAGATGCCCGACCATGGCAGGAAGCTGCAGAGCAGGCTGT +
Preference number: 1 (lower is better)
Translates to: CPADITWSGCTRCHS*KRCPTMAGSCRAGC
Trigger: ACAGCCTGCTCTGCAGCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGACCATGTGATGTCGGCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572739.5
3UTR GCA 90 bp TGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTC +
Preference number: 1 (lower is better)
Translates to: WRHQAPIPLCLLWRT*HGWACSAHAHDVLF
Trigger: GAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR CCA 90 bp TTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTaGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGAT +
Preference number: 1 (lower is better)
Translates to: FCGWRHQAPIPLCLL*RTCHGWACSAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR CCA 90 bp CTCTGCCGTTCTCTGTGCCCATCCAGGGCCTTCCACTTTTGTGGCTaGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACC +
Preference number: 1 (lower is better)
Translates to: LCRSLCPSRAFHFCG*RHQAPIPLCLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR CCA 90 bp GCCATGGAGCCTGCTGTGTTAGCTTGGCACAAGTCACCAAACCTCTaGGCTGTGCTGGTGCATAAGGTGGTGGACTCTGCAGTCCCCACG +
Preference number: 1 (lower is better)
Translates to: AMEPAVLAWHKSPNL*AVLVHKVVDSAVPT
Trigger: CGTGGGGACTGCAGAGTCCACCACCTTATGCACCAGCACAGCCCAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGCTCCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR TCA 90 bp CAGAAGACTCGTCCCTTACCCTGTGGGGCAGAAATAGAAATCACATaGTCGCCACTGATTCGCAGTGGAGAGGGCGCTGAGCTGGGCCCG +
Preference number: 1 (lower is better)
Translates to: QKTRPLPCGAEIEIT*SPLIRSGEGAELGP
Trigger: CGGGCCCAGCTCAGCGCCCTCTCCACTGCGAATCAGTGGCGATCATGTGATTTCTATTTCTGCCCCACAGGGTAAGGGACGAGTCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 90 bp GCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTaGGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGT +
Preference number: 1 (lower is better)
Translates to: ASLGWFWKGTGHSLY*APLFRGSCAFTVKC
Trigger: ACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR CCA 90 bp AGTCGGGTGCACAGCCCAGTTGCCATGGAGCCTGCTGTGTTAGCTTaGCACAAGTCACCAAACCTCTGGGCTGTGCTGGTGCATAAGGTG +
Preference number: 1 (lower is better)
Translates to: SRVHSPVAMEPAVLA*HKSPNLWAVLVHKV
Trigger: CACCTTATGCACCAGCACAGCCCAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGCTCCATGGCAACTGGGCTGTGCACCCGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 90 bp TTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTaGGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGA +
Preference number: 1 (lower is better)
Translates to: FRGSCAFTVKCVHNT*VPPLQEKVPSSFPG
Trigger: TCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 90 bp GTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTaGAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGA +
Preference number: 1 (lower is better)
Translates to: VPLRSSVSIILAFLP*RRKSPPAFQEGAAR
Trigger: TCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR CCA 90 bp AAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTaGGGCAGAAATAGAAATCACATGATCGCCACTGATTCGCAGTGG +
Preference number: 1 (lower is better)
Translates to: KCPWQSLPEDSSLTL*GRNRNHMIATDSQW
Trigger: CCACTGCGAATCAGTGGCGATCATGTGATTTCTATTTCTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 90 bp GAGATAGTGGTGCTGCTTGAAGTCTCTGTTTTCATAGAAGTTTATTaGTGTGTTGTTGGTGGTGAGGACATGCAGGTAAATGGCTTTGCA +
Preference number: 1 (lower is better)
Translates to: EIVVLLEVSVFIEVY*CVVGGEDMQVNGFA
Trigger: TGCAAAGCCATTTACCTGCATGTCCTCACCACCAACAACACAGCAATAAACTTCTATGAAAACAGAGACTTCAAGCAGCACCACTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
3UTR-3UTR CCA 90 bp GGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 2 (lower is better)
Translates to: GQAPPSECSHTGSALGTVHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...CACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 2 (lower is better)
Translates to: APPSECSHTGSALGTVHAPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...CGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp TGGGAGAGGCCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 2 (lower is better)
Translates to: WERPSEGRPLPVNAATLGHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...ACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGGCCTCTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 2 (lower is better)
Translates to: PRMGMLCACPRCSVPEPVHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...CACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR TCA 90 bp GCAGCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTCCGACGGGCAGTGTaGCCTCCCAGGGCACTGGTA +
Preference number: 2 (lower is better)
Translates to: AALEAEGHRSLRPRLPRVVRRAV*PPRALV
Trigger: TACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGAC...AACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR TCA 90 bp TCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTGCCTGGTGCCTGCCTTCAAGGACACAGGTCCCTaGGGCCCCGTCTGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: SCQHRQGGGCCSCLVPAFKDTGP*GPVCPG
Trigger: CCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTT...GAAGGCAGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GGGGCTGAGCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCATGCGTGACCGCCTGTaGCAGGGGGCTGAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: GAEPQSSVLARKASPRLPMRDRL*QGAEPQ
Trigger: CTGAGGCTCAGCCCCCTGGCACAGGCGGTCACGCAT...GGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGCTCAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CATGGCGCGGCCCTCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTGCCTTGGAGCAGCAGCTTGTaGCAGCATGAGGGAGGGCGG +
Preference number: 2 (lower is better)
Translates to: HGAALLPAPSRRGMLLLPWSSSL*QHEGGR
Trigger: CCGCCCTCCCTCATGCTGCCACAAGCTGCTGCTCCA...AGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGGGCCTTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 2 (lower is better)
Translates to: AVPTAPSGSAVLCAHPGPCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...AGGCCCTGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GCAGCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTCGTCAAGGAGGGGGATaGTGCTCCTGCCTGGTGCCT +
Preference number: 2 (lower is better)
Translates to: AALEAEGHRSLRPRLPRVRQGGG*CSCLVP
Trigger: AGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACG...AACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp AGCTTTCCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 2 (lower is better)
Translates to: SFPGRSCKNRQRSGRGPVPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...CACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GCTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 2 (lower is better)
Translates to: AEEPATDGHALRMPTMFCPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...ACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000575076.5
3UTR-3UTR CCA 90 bp GTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGACCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 2 (lower is better)
Translates to: VPATDGHALRMPTMFCSRPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...TCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp TGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 2 (lower is better)
Translates to: WFWKGTGHSLYCAPLFRGHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGAGGGCACCCCTCATGGAGGAGTaGGGGCCACTCCTCACCCCC +
Preference number: 2 (lower is better)
Translates to: PGRSCKNRQRSGRGPVRAPLMEE*GPLLTP
Trigger: GGGGGTGAGGAGTGGCCCCCACTCCTCCATGAGGGG...TGCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GCAGCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTTGGAGCAGCAGCTTGTaGCAGCATGAGGGAGGGCGG +
Preference number: 2 (lower is better)
Translates to: AALEAEGHRSLRPRLPRVWSSSL*QHEGGR
Trigger: CCGCCCTCCCTCATGCTGCCACAAGCTGCTGCTCCA...AACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GCAGCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTGGCTGGGCAGCTCTaGAGGCGGAAGGACACAGGT +
Preference number: 2 (lower is better)
Translates to: AALEAEGHRSLRPRLPRVVAGQL*RRKDTG
Trigger: ACCTGTGTCCTTCCGCCTCCAGAGCTGCCCAGCCAC...AACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR TCA 90 bp CATGGCGCGGCCCTCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTGCCTAGCAGGGAGGGGAGCTaGAGAGCCTTTGTGTCTGCT +
Preference number: 2 (lower is better)
Translates to: HGAALLPAPSRRGMLLLPSREGS*RAFVSA
Trigger: AGCAGACACAAAGGCTCTTCAGCTCCCCTCCCTGCT...AGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360862.9
ENST00000414063.6
3UTR-3UTR GCA 90 bp CATGGCGCGGCCCTCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTGCCTCGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 2 (lower is better)
Translates to: HGAALLPAPSRRGMLLLPRMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...AGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GGGCAGGGTGGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTACACAGGACTGCCCCCTaGCCACAAGGCCAGGCCCTA +
Preference number: 2 (lower is better)
Translates to: GQGGAARTLCHGFVTLQLHRTAP*PQGQAL
Trigger: TAGGGCCTGGCCTTGTGGGCAGGGGGCAGTCCTGTG...TAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCCACCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CAGCATGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCAGGTGACACTGCAGCTATaGTGGGCGGGACTCCGCCCC +
Preference number: 2 (lower is better)
Translates to: QHGAALPPALSGQQRFKQVTLQL*WAGLRP
Trigger: GGGGCGGAGTCCCGCCCAGCATAGCTGCAGTGTCAC...CTGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCATGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTTCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCC +
Preference number: 2 (lower is better)
Translates to: ALEAEGHRSLRPRLPRVVRTCHG*ACSAHA
Trigger: GGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG...AACAACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGAGGGCAACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 2 (lower is better)
Translates to: PGRSCKNRQRSGRGPVRATLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...TGCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GGGGCTGAGCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCCAGGCTTCTTTGGGCTaGTTCTGGAAGGGGACGGGC +
Preference number: 2 (lower is better)
Translates to: GAEPQSSVLARKASPRLPQASLG*FWKGTG
Trigger: GCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTG...GGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGCTCAGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp AGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCATCAGCCCCTCATCAGCCCCTCATaGAGGAGTGGGGGCCACTCC +
Preference number: 2 (lower is better)
Translates to: SSVLARKASPRLPTPHQPLISPS*RSGGHS
Trigger: GGAGTGGCCCCCACTCCTCCATGAGGGGCTGATGAG...GGGCTGATGAGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 2 (lower is better)
Translates to: PSECSHTGSALGTVHAQGGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...CCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp AGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCATCAGCCCTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 2 (lower is better)
Translates to: SSVLARKASPRLPTPHQPCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...GGGCTGATGAGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CTGGTGCATAAGGTGGTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCCTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCT +
Preference number: 2 (lower is better)
Translates to: LVHKVVDSAVPTAPSGSALLWRT*HGWACS
Trigger: AGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG...GGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCACCTTATGCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACTGCGCCCCTCCCAGTGAATaGAGCCACACTGGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: GACQGPTGSVTSQGTGNCAPPSE*SHTGSA
Trigger: GGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC...GCAGTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTCCAGGCCATGGTGTCTaGCTGCAGCCACTAGGCGCC +
Preference number: 2 (lower is better)
Translates to: QLNGACQGPTGSVTSQGTPGHGV*LQPLGA
Trigger: GGCGCCTAGTGGCTGCAGGCAGACACCATGGCCTGG...AGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CGATGCCTGTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCCCAGGCCATGGTGTCTaGCTGCAGCCACTAGGCGCC +
Preference number: 2 (lower is better)
Translates to: RCLSSAGQLNGACQGPTGPGHGV*LQPLGA
Trigger: GGCGCCTAGTGGCTGCAGGCAGACACCATGGCCTGG...GCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp ACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 2 (lower is better)
Translates to: TCVPPLQEKVPSSFPGRSHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...GCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp TCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTGCCTGGTGCCTGCCTTCCAGGCTTCTTTGGGCTaGTTCTGGAAGGGGACGGGC +
Preference number: 2 (lower is better)
Translates to: SCQHRQGGGCCSCLVPAFQASLG*FWKGTG
Trigger: GCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTG...GAAGGCAGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp TGGGAGAGGCCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 2 (lower is better)
Translates to: WERPSEGRPLPVNAATLGRMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...ACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGGCCTCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CAGCATGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCAGCTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCT +
Preference number: 2 (lower is better)
Translates to: QHGAALPPALSGQQRFKQLLWRT*HGWACS
Trigger: AGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG...CTGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCATGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp AGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCATCAGCCCCAGGGCACTGGTAACTaGACGGAAGGTGCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: SSVLARKASPRLPTPHQPQGTGN*TEGAEE
Trigger: CTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTG...GGGCTGATGAGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp TCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGGGCCTTCCACCATACCTTTGTGTCTaGTGTGGCGTACCTGCCACG +
Preference number: 2 (lower is better)
Translates to: SPRPLPALPFSVPIQGLPPYLCV*CGVPAT
Trigger: CGTGGCAGGTACGCCACAGCAGACACAAAGGTATGG...TGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCGGCGGAGACACTCTaGCCACCCCACACCCTGCCT +
Preference number: 2 (lower is better)
Translates to: PRLLWAGSGRGRAIPFIAPAETL*PPHTLP
Trigger: AGGCAGGGTGTGGGGTGGGCAGAGTGTCTCCGCCGG...CGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 2 (lower is better)
Translates to: LYCAPLFRGSCAFTVKCVHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...GACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACACACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 2 (lower is better)
Translates to: LPCRRKSPPAFQEGAARTHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...TGTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp AATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 2 (lower is better)
Translates to: NGACQGPTGSVTSQGTGNTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...GTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CCTCCCAGGGCACTGGTAACTGCACGGAAGGTGCTGAGGAGTAGGAACCGTCCTACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 2 (lower is better)
Translates to: PPRALVTARKVLRSRNRPTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...AGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTGGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp TGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 2 (lower is better)
Translates to: WAGSGRGRAIPFIAPPCSTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...GGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACGAACAGGCAGCGGAGTaGGAGAGGCCCAGTGAGGGC +
Preference number: 2 (lower is better)
Translates to: VLSRSAEWSMPRSDGQCDEQAAE*ERPSEG
Trigger: GCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTC...GTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCGAACAGGCAGCGGAGTaGGAGAGGCCCAGTGAGGGC +
Preference number: 2 (lower is better)
Translates to: ASLGWFWKGTGHSLYCAPEQAAE*ERPSEG
Trigger: GCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTC...GGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR TCA 90 bp GCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTTGACAGATGGCAGCCTTaGGGCCTAATGTCGAGCTCA +
Preference number: 2 (lower is better)
Translates to: ALEAEGHRSLRPRLPRVVDRWQP*GLMSSS
Trigger: TGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTC...AACAACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GGGGCTGAGCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCTTTCCAGGAAGGAGCTaGAAGAACAGGCAGCGGAGT +
Preference number: 2 (lower is better)
Translates to: GAEPQSSVLARKASPRLPFPGRS*KNRQRS
Trigger: ACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAA...GGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGCTCAGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCTGGGCGCAGGGCACTGGTAACTaGACGGAAGGTGCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: GAARTLCHGFVTLQLCWAQGTGN*TEGAEE
Trigger: CTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTG...CGCCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGATGGCGCGGCCCTCCTaGCAGCACCGTCAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: QMSMAEPSRRLVPYPVGQMARPS*QHRQGG
Trigger: CCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCAT...CTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTCTCTGCCGTTCTCTGTaGCCATCCAGGGCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: QLNGACQGPTGSVTSQGTLCRSL*PSRAFH
Trigger: GTGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAG...AGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCACAAACCTCTGGGCTGTaGTGGTGCATAAGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: ASELCACEESLPQAAHPSQTSGL*WCIRWW
Trigger: CCACCACCTTATGCACCAGCACAGCCCAGAGGTTTG...TGAGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGGCCCACCCCACACCCTaGCTATGGGCCACACAGCTG +
Preference number: 2 (lower is better)
Translates to: PRLLWAGSGRGRAIPFIAAHPTP*LWATQL
Trigger: CAGCTGTGTGGCCCATAGGCAGGGTGTGGGGTGGGC...CGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp TTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCCGGCGGAGACACTCTaGCCACCCCACACCCTGCCT +
Preference number: 2 (lower is better)
Translates to: LRSSLAGESPLQLSRKELPAETL*PPHTLP
Trigger: AGGCAGGGTGTGGGGTGGGCAGAGTGTCTCCGCCGG...CAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp TTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCC +
Preference number: 2 (lower is better)
Translates to: FWKGTGHSLYCAPLFRGSRTCHG*ACSAHA
Trigger: GGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG...GGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCTGGGCGCCTTTGTGTCTGCTGTaGCGTACCTGCCACGGATGG +
Preference number: 2 (lower is better)
Translates to: GAARTLCHGFVTLQLCWAPLCLL*RTCHGW
Trigger: CCATCCGTGGCAGGTACGCCACAGCAGACACAAAGG...CGCCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp TGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 2 (lower is better)
Translates to: CVPPLQEKVPSSFPGRSCTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...GCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGGAACAGGCAGCGGAGTaGGAGAGGCCCAGTGAGGGC +
Preference number: 2 (lower is better)
Translates to: PRLLWAGSGRGRAIPFIAEQAAE*ERPSEG
Trigger: GCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTC...CGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp AGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCAGGCTTCTTTGGGCTaGTTCTGGAAGGGGACGGGC +
Preference number: 2 (lower is better)
Translates to: RSAEWSMPRSDGQCDLPGQASLG*FWKGTG
Trigger: GCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTG...CCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CCTGTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTCTCATCAGCCCCTCATaGAGGAGTGGGGGCCACTCC +
Preference number: 2 (lower is better)
Translates to: PVLSRSAEWSMPRSDGQCLISPS*RSGGHS
Trigger: GGAGTGGCCCCCACTCCTCCATGAGGGGCTGATGAG...ACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp AGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCATGTGGCCAGGCCTTaGAGCAGCAGCTTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: RSAEWSMPRSDGQCDLPGHVARP*SSSLWQ
Trigger: CTGCCACAAGCTGCTGCTCCAAGGCCTGGCCACATG...CCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GGCTGTGGGCCTGGCGGTAGACTCTGTGCGGAATGGAGCAGGGGCTCAGGCTGGGGACATGCAGGTAAATaGCTTTGCAGTGGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: GCGPGGRLCAEWSRGSGWGHAGK*LCSGPG
Trigger: CCCAGGACCACTGCAAAGCCATTTACCTGCATGTCC...CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCTACCGCCAGGCCCACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572739.5
3UTR-3UTR TCA 90 bp CCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGAAATAGACAGCTTGTGGCAGCATaGGGGAGGGCGGGGAGGACC +
Preference number: 2 (lower is better)
Translates to: PWQSLPEDSSLTLWGRNRQLVAA*GRAGRT
Trigger: GGTCCTCCCCGCCCTCCCTCATGCTGCCACAAGCTG...TCTATTTCTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR TCA 90 bp GGCTGTGGGCCTGGCGGTAGACTCTGTGCGGAATGGAGCAGGGGCTCAGGCTGGCTGTGTTGTTGGTGGTaGGGACATGCAGGTAAATGG +
Preference number: 2 (lower is better)
Translates to: GCGPGGRLCAEWSRGSGWLCCWW*GHAGKW
Trigger: CCATTTACCTGCATGTCCTCACCACCAACAACACAG...CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCTACCGCCAGGCCCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
3UTR-3UTR GCA 90 bp TCAGCATGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCACGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 2 (lower is better)
Translates to: SAWCGPPASTVRSAEVQARMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...TGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCATGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp AAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCCGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 2 (lower is better)
Translates to: KGTGHSLYCAPLFRGSCARMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CCTGTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 2 (lower is better)
Translates to: PVLSRSAEWSMPRSDGQCCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...ACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 2 (lower is better)
Translates to: RAIPFIAPPCSEAPVPLRCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...CCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 2 (lower is better)
Translates to: ASLGWFWKGTGHSLYCAPCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...GGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp AATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACCTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCT +
Preference number: 2 (lower is better)
Translates to: NGACQGPTGSVTSQGTGNLLWRT*HGWACS
Trigger: AGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG...GTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp AGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCATCAGCCCTTTCCAGGAAGGAGCTaGAAGAACAGGCAGCGGAGT +
Preference number: 2 (lower is better)
Translates to: SSVLARKASPRLPTPHQPFPGRS*KNRQRS
Trigger: ACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAA...GGGCTGATGAGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp ACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCATGCGTGACCGCCTGTaGCAGGGGGCTGAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: TCVPPLQEKVPSSFPGRSMRDRL*QGAEPQ
Trigger: CTGAGGCTCAGCCCCCTGGCACAGGCGGTCACGCAT...GCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 2 (lower is better)
Translates to: PCSEAPVPLRSSVSIILAHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...CGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp TTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 2 (lower is better)
Translates to: LRSSLAGESPLQLSRKELTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...CAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CGATGCCTGTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCTCTTTGGGCTGGTTCTaGAAGGGGACGGGCCATTCC +
Preference number: 2 (lower is better)
Translates to: RCLSSAGQLNGACQGPTGSLGWF*KGTGHS
Trigger: GGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGA...GCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp AGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCTGTCTGCACCCCTCATGGAGGAGTaGGGGCCACTCCTCACCCCC +
Preference number: 2 (lower is better)
Translates to: RQMAALRPNVELSFLLSAPLMEE*GPLLTP
Trigger: GGGGGTGAGGAGTGGCCCCCACTCCTCCATGAGGGG...TGCAGACAGGAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GGCTGCCCAGCCGACATCACATGGTCCGGCTGTACTCGATGCCACTCTTGGAAGAGACTCTGTGCGGAATaGAGCAGGGGCTCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: GCPADITWSGCTRCHSWKRLCAE*SRGSGW
Trigger: CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCT...CTTCCAAGAGTGGCATCGAGTACAGCCGGACCATGTGATGTCGGCTGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
3UTR CAA 90 bp AGGGCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTaGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCG +
Preference number: 2 (lower is better)
Translates to: RAFHFCGWRHQAPIP*CLLWRTCHGWACSA
Trigger: CGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR TCA 90 bp GTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCAGCAGGGAGGGGAGCTaGAGAGCCTTTGTGTCTGCT +
Preference number: 2 (lower is better)
Translates to: VLEGDGPFPLLRPLVPRLSREGS*RAFVSA
Trigger: AGCAGACACAAAGGCTCTTCAGCTCCCCTCCCTGCT...GAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572942.5
3UTR-3UTR TCA 90 bp ACAAGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCTGTCTAACCGTCCTGATGCGTaGCCGCCTGTGCCAGGGGGC +
Preference number: 2 (lower is better)
Translates to: TRQMAALRPNVELSFLLSNRPDA*PPVPGG
Trigger: GCCCCCTGGCACAGGCGGTCACGCATCAGGACGGTT...AGACAGGAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR TCA 90 bp TCAGCATGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCATCTGCCATGGCTTTGTaGCACTGCAGCTATGCTGGG +
Preference number: 2 (lower is better)
Translates to: SAWCGPPASTVRSAEVQASAMAL*HCSYAG
Trigger: CCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGA...TGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCATGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR TCA 90 bp TCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAAAGCAGGGAGGGGAGCTaGAGAGCCTGCCACGGATGG +
Preference number: 2 (lower is better)
Translates to: SSLAGESPLQLSRKELQESREGS*RACHGW
Trigger: CCATCCGTGGCAGGCTCTTCAGCTCCCCTCCCTGCT...TTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407558.9
ENST00000575076.5
3UTR-3UTR GCA 90 bp GCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 2 (lower is better)
Translates to: AGSGRGRAIPFIAPPCSEGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...CTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp AGCTTTCCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGCGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 2 (lower is better)
Translates to: SFPGRSCKNRQRSGRGPVRMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...CACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCTGGGCGGTTCCGAGGCTCCTGTaGCTTTACGGTCAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: GAARTLCHGFVTLQLCWAVPRLL*LYGQVC
Trigger: ACACACTTGACCGTAAAGGCACAGGAGCCTCGGAAC...CGCCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp TCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAAATGCGTGACCGCCTGTaGCAGGGGGCTGAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: SSLAGESPLQLSRKELQEMRDRL*QGAEPQ
Trigger: CTGAGGCTCAGCCCCCTGGCACAGGCGGTCACGCAT...TTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGAAATAGACACAGGACTGCCCCCTaGCCACAAGGCCAGGCCCTA +
Preference number: 2 (lower is better)
Translates to: PWQSLPEDSSLTLWGRNRHRTAP*PQGQAL
Trigger: TAGGGCCTGGCCTTGTGGGCAGGGGGCAGTCCTGTG...TCTATTTCTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTCAAACCTCTGGGCTGTaGTGGTGCATAAGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: QLNGACQGPTGSVTSQGTQTSGL*WCIRWW
Trigger: CCACCACCTTATGCACCAGCACAGCCCAGAGGTTTG...AGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGGGTGCACAGCCCAGTTaGCATGGAGCCTGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: RAIPFIAPPCSEAPVPLRGAQPS*HGACCV
Trigger: AACACAGCAGGCTCCATGGCAACTGGGCTGTGCACC...CCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GGCTGCCCAGCCGACATCACATGGTCCGGCTGTACTCGATGCCACTCTTGGAAGGCAGGTAAATGGCTTTaGAGTGGTCCTGGGCGGTGG +
Preference number: 2 (lower is better)
Translates to: GCPADITWSGCTRCHSWKAGKWL*SGPGRW
Trigger: CCACCGCCCAGGACCACTGCAAAGCCATTTACCTGC...CTTCCAAGAGTGGCATCGAGTACAGCCGGACCATGTGATGTCGGCTGGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572739.5
3UTR-3UTR CCA 90 bp CAGCATGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCAGGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: QHGAALPPALSGQQRFKQAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...CTGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: GRGRAIPFIAPPCSEAPVTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...CACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: EPATDGHALRMPTMFCSRTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...TCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000575076.5
3UTR-3UTR CCA 90 bp TGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACTGCACGGAAACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: CQGPTGSVTSQGTGNCTETSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...TTCCGTGCAGTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp TTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCC +
Preference number: 2 (lower is better)
Translates to: LRSSLAGESPLQLSRKELRTCHG*ACSAHA
Trigger: GGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG...CAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCTCCTGTCTGCATGTaGCCAGGCCTTGGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: PRLLWAGSGRGRAIPFIAPPVCM*PGLGAA
Trigger: TGCTGCTCCAAGGCCTGGCCACATGCAGACAGGAGG...CGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCATTCCACTTTTGTGGCTaGAGGCACCAAGCTCCCATA +
Preference number: 2 (lower is better)
Translates to: DSAVPTAPSGSAVLCAHPFHFCG*RHQAPI
Trigger: TATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAA...TGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR CAA 90 bp GGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATaGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTG +
Preference number: 2 (lower is better)
Translates to: GFFGLVLEGDGPFPL*RPLVPRLLCLYGQV
Trigger: CACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR CAA 90 bp CTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGGGCCTTCCACTTTaGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: LPALPFSVPIQGLPL*WLEAPSSHTFVSAV
Trigger: CACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAGCCGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR TCA 90 bp ACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCCTGCACGGAAGGTGCTaGGGAGTAGGAACCGTCCTG +
Preference number: 2 (lower is better)
Translates to: TCVPPLQEKVPSSFPGRSLHGRC*GVGTVL
Trigger: CAGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAG...GCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR TCA 90 bp TCAGCATGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCAGATGCTAGAAGTATGTaGTGCACCTGCGGCACTGAC +
Preference number: 2 (lower is better)
Translates to: SAWCGPPASTVRSAEVQADARSM*CTCGTD
Trigger: GTCAGTGCCGCAGGTGCATCACATACTTCTAGCATC...TGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCATGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCAAGAGCCTTTGTGTCTaGTGTGGCGTACCTGCCACG +
Preference number: 2 (lower is better)
Translates to: VLEGDGPFPLLRPLVPRLKSLCV*CGVPAT
Trigger: CGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTT...GAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572942.5
3UTR-3UTR GCA 90 bp CCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGAAATAGAGCCCCTCCCAGTGAATaGAGCCACACTGGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: PWQSLPEDSSLTLWGRNRAPPSE*SHTGSA
Trigger: GGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC...TCTATTTCTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GGACCCAAGGAGTCTCGGCGATGCCTGTCCTCAGCAGGTCAGCTGAATGGAGCACCATACCTTTGTGTCTaGTGTGGCGTACCTGCCACG +
Preference number: 2 (lower is better)
Translates to: GPKESRRCLSSAGQLNGAPYLCV*CGVPAT
Trigger: CGTGGCAGGTACGCCACAGCAGACACAAAGGTATGG...TGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCGCCGAGACTCCTTGGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp TGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCCAAACCTCTGGGCTGTaGTGGTGCATAAGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: WFWKGTGHSLYCAPLFRGQTSGL*WCIRWW
Trigger: CCACCACCTTATGCACCAGCACAGCCCAGAGGTTTG...GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp AGCAAGCAGCATTTGGAATGCAGGGTGGAGAGGATGCTAGAAGTATGTGATGCACCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 2 (lower is better)
Translates to: SKQHLECRVERMLEVCDAPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...TGCATCACATACTTCTAGCATCCTCTCCACCCTGCATTCCAAATGCTGCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GCTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: AEEPATDGHALRMPTMFCTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...ACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000575076.5
3UTR-3UTR CCA 90 bp GGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: GFFGLVLEGDGPFPLLRPTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...GGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: ASLGWFWKGTGHSLYCAPTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...GGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACACGTACCTGCCACGGATaGGCATGCTCTGCGCATGCC +
Preference number: 2 (lower is better)
Translates to: LPCRRKSPPAFQEGAARTRTCHG*ACSAHA
Trigger: GGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG...TGTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAACAGGCTTCTTTGGGCTaGTTCTGGAAGGGGACGGGC +
Preference number: 2 (lower is better)
Translates to: RSSLAGESPLQLSRKELQQASLG*FWKGTG
Trigger: GCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTG...TTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR TCA 90 bp TCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGTCCGACGGGCAGTGTaGCCTCCCAGGGCACTGGTA +
Preference number: 2 (lower is better)
Translates to: SIILAFLPCRRKSPPAFQVRRAV*PPRALV
Trigger: TACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGAC...CTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CTCGGTCCCCACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCT +
Preference number: 2 (lower is better)
Translates to: LGPHTNKGTDGSKVGCTALLWRT*HGWACS
Trigger: AGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG...GGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGTGGGGACCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCTTTCCAGGAAGGAGCTaGAAGAACAGGCAGCGGAGT +
Preference number: 2 (lower is better)
Translates to: VLEGDGPFPLLRPLVPRLFPGRS*KNRQRS
Trigger: ACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAA...GAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GGACAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGAAGGAGTCTCGGCGATaGCTGTCCTCAGCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: GQMSMAEPSRRLVPYPVGKESRR*LSSAGQ
Trigger: CTGACCTGCTGAGGACAGGCATCGCCGAGACTCCTT...CCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCATACCTTTGTGTCTaGTGTGGCGTACCTGCCACG +
Preference number: 2 (lower is better)
Translates to: PRLLWAGSGRGRAIPFIAPYLCV*CGVPAT
Trigger: CGTGGCAGGTACGCCACAGCAGACACAAAGGTATGG...CGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp TGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: WRTCHGWACSAHAHDVLFAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...GAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR CAA 90 bp GGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTaGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAAT +
Preference number: 2 (lower is better)
Translates to: GWFWKGTGHSLYCAP*FRGSCAFTVKCVHN
Trigger: ATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR TCA 90 bp AGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGAAATAGAAATCACATGGTCCGACGGGCAGTGTaGCCTCCCAGGGCACTGGTA +
Preference number: 2 (lower is better)
Translates to: SLPEDSSLTLWGRNRNHMVRRAV*PPRALV
Trigger: TACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGAC...CATGTGATTTCTATTTCTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR TCA 90 bp GGACAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGTCTGCCATGGCTTTGTaGCACTGCAGCTATGCTGGG +
Preference number: 2 (lower is better)
Translates to: GQMSMAEPSRRLVPYPVGSAMAL*HCSYAG
Trigger: CCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGA...CCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR TCA 90 bp CAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGCCCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCA +
Preference number: 2 (lower is better)
Translates to: QNRPGRVAAVDVEDIGEALCRAS*TLSRRP
Trigger: TGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAG...GGCTTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573345.5
3UTR-3UTR GCA 90 bp AGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCTGTCTGCAGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 2 (lower is better)
Translates to: RQMAALRPNVELSFLLSAGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...TGCAGACAGGAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 2 (lower is better)
Translates to: LLWLEAPSSHTFVSAVAYRMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...GTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp AGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCTGTCTGCACGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 2 (lower is better)
Translates to: RQMAALRPNVELSFLLSARMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...TGCAGACAGGAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp ATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 2 (lower is better)
Translates to: IPFIAPPCSEAPVPLRSSCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...ACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 2 (lower is better)
Translates to: APLFRGSCAFTVKCVHNTCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...AGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp TGTCTGCCTGCAGCCACTAGGCGCCTCTCGGTCCCCACACAAATAAAGGCACTGTTTCCAGGAAGGAGCTaGAAGAACAGGCAGCGGAGT +
Preference number: 2 (lower is better)
Translates to: CLPAATRRLSVPTQIKALFPGRS*KNRQRS
Trigger: ACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAA...CAGTGCCTTTATTTGTGTGGGGACCGAGAGGCGCCTAGTGGCTGCAGGCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp ACAAGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCTGTCTCTCTGCCGTTCTCTGTaGCCATCCAGGGCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: TRQMAALRPNVELSFLLSLCRSL*PSRAFH
Trigger: GTGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAG...AGACAGGAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GTCCAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGCAGGTAAATGGCTTTaGAGTGGTCCTGGGCGGTGG +
Preference number: 2 (lower is better)
Translates to: VQNRPGRVAAVDVEDIGEAGKWL*SGPGRW
Trigger: CCACCGCCCAGGACCACTGCAAAGCCATTTACCTGC...TTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
3UTR-3UTR CCA 90 bp CTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: LKSLPRMGMLCACPRCSVAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...AACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000575076.5
3UTR-3UTR CCA 90 bp GGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: GHSLYCAPLFRGSCAFTVAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...GACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp TGTCTGCCTGCAGCCACTAGGCGCCTCTCGGTCCCCACACAAATAAAGGCACTGGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: CLPAATRRLSVPTQIKALAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...CAGTGCCTTTATTTGTGTGGGGACCGAGAGGCGCCTAGTGGCTGCAGGCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGCCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCC +
Preference number: 2 (lower is better)
Translates to: APVPLRSSVSIILAFLPCRTCHG*ACSAHA
Trigger: GGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG...GCAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTTATGGGCCACACAGCTaGGCCTGGGTGCTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: PPCSEAPVPLRSSVSIILYGPHS*AWVLQE
Trigger: CTCCTGGAGCACCCAGGCCCAGCTGTGTGGCCCATA...AAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp ATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 2 (lower is better)
Translates to: IPFIAPPCSEAPVPLRSSGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...ACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGCTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 2 (lower is better)
Translates to: APVPLRSSVSIILAFLPCCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...GCAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GTGTCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCT +
Preference number: 2 (lower is better)
Translates to: VSIILAFLPCRRKSPPAFLLWRT*HGWACS
Trigger: AGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG...GAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp TTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGTTTCCAGGAAGGAGCTaGAAGAACAGGCAGCGGAGT +
Preference number: 2 (lower is better)
Translates to: LRSSLAGESPLQLSRKELFPGRS*KNRQRS
Trigger: ACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAA...CAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp GGCTGTGGGCCTGGCGGTAGACTCTGTGCGGAATGGAGCAGGGGCTCAGGCTGGTTCATAGAAGTTTATTaGTGTGTTGTTGGTGGTGAG +
Preference number: 2 (lower is better)
Translates to: GCGPGGRLCAEWSRGSGWFIEVY*CVVGGE
Trigger: CTCACCACCAACAACACAGCAATAAACTTCTATGAA...CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCTACCGCCAGGCCCACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
3UTR-3UTR CCA 90 bp GTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: VPPLQEKVPSSFPGRSCKAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...CTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: LLWLEAPSSHTFVSAVAYTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...GTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGCCATCTTTGGACATGCAGGTAAATaGCTTTGCAGTGGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: RPGRVAAVDVEDIGEAIFGHAGK*LCSGPG
Trigger: CCCAGGACCACTGCAAAGCCATTTACCTGCATGTCC...AAAGATGGCTTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
3UTR-3UTR TCA 90 bp TGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTGCACGGAAGGTGCTaGGGAGTAGGAACCGTCCTG +
Preference number: 2 (lower is better)
Translates to: CSEAPVPLRSSVSIILAFLHGRC*GVGTVL
Trigger: CAGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAG...GAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR TCA 90 bp CGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGCCATCTTTCTGTGTTGTTGGTGGTaGGGACATGCAGGTAAATGG +
Preference number: 2 (lower is better)
Translates to: RPGRVAAVDVEDIGEAIFLCCWW*GHAGKW
Trigger: CCATTTACCTGCATGTCCTCACCACCAACAACACAG...AAAGATGGCTTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
3UTR-3UTR GCA 90 bp TCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 2 (lower is better)
Translates to: SIILAFLPCRRKSPPAFQGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...CTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp CCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGCAGCTGAATGGAGCATaGCAAGGTCCGACGGGCAGT +
Preference number: 2 (lower is better)
Translates to: PCSEAPVPLRSSVSIILAQLNGA*QGPTGS
Trigger: ACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTG...CGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp TTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: FCGWRHQAPIPLCLLWRTAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...GGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGCCTTTGTGTCTGCTGTaGCGTACCTGCCACGGATGG +
Preference number: 2 (lower is better)
Translates to: PCSEAPVPLRSSVSIILAPLCLL*RTCHGW
Trigger: CCATCCGTGGCAGGTACGCCACAGCAGACACAAAGG...CGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGCCTTTGTGTCTGCTGTaGCGTACCTGCCACGGATGG +
Preference number: 2 (lower is better)
Translates to: GSCAFTVKCVHNTCVPPLPLCLL*RTCHGW
Trigger: CCATCCGTGGCAGGTACGCCACAGCAGACACAAAGG...CAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp TCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGTCTTTGGGCTGGTTCTaGAAGGGGACGGGCCATTCC +
Preference number: 2 (lower is better)
Translates to: SIILAFLPCRRKSPPAFQSLGWF*KGTGHS
Trigger: GGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGA...CTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp GTGTCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCTCTTTGGGCTGGTTCTaGAAGGGGACGGGCCATTCC +
Preference number: 2 (lower is better)
Translates to: VSIILAFLPCRRKSPPAFSLGWF*KGTGHS
Trigger: GGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGA...GAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CTGAGCCCGAGGACAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTATTCCACTTTTGTGGCTaGAGGCACCAAGCTCCCATA +
Preference number: 2 (lower is better)
Translates to: LSPRTNVHGRAFQKTRPLFHFCG*RHQAPI
Trigger: TATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAA...TAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTGTCCTCGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
3UTR CAA 90 bp TGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTaGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: CAFTVKCVHNTCVPP*QEKVPSSFPGRSCK
Trigger: CTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp TCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGTTCCGAGGCTCCTGTaGCTTTACGGTCAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: SIILAFLPCRRKSPPAFQVPRLL*LYGQVC
Trigger: ACACACTTGACCGTAAAGGCACAGGAGCCTCGGAAC...CTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CCA 90 bp CACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGCCAGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: HTNKGTDGSKVGCTAQLPAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...TGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp TGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCGTTCCGAGGCTCCTGTaGCTTTACGGTCAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: CSEAPVPLRSSVSIILAFVPRLL*LYGQVC
Trigger: ACACACTTGACCGTAAAGGCACAGGAGCCTCGGAAC...GAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR GCA 90 bp TCAGGCTGGCTAGTGCAGAGCCCAGGTGCTGGATGTAGTCCAAAATCGTCCAGGTTCATAGAAGTTTATTaGTGTGTTGTTGGTGGTGAG +
Preference number: 2 (lower is better)
Translates to: SGWLVQSPGAGCSPKSSRFIEVY*CVVGGE
Trigger: CTCACCACCAACAACACAGCAATAAACTTCTATGAA...CCTGGACGATTTTGGACTACATCCAGCACCTGGGCTCTGCACTAGCCAGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
3UTR GCA 72 bp AAGGCCCGGCGGAGACACTCTGCCCACCCCACACCCTaGCTATGGGCCACACAGCTGGGCCTGGGTGCTCCA +
Preference number: 3 (lower is better)
Translates to: KARRRHSAHPTP*LWATQLGLGAP
Trigger: TGGAGCACCCAGGCCCAGCTGTGTGGCCCATAGGCAGGGTGTGGGGTGGGCAGAGTGTCTCCGCCGGGCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR TCA 72 bp AGGGTGGCGCCGCTAGGACCCTCTGCCATGGCTTTGTaGCACTGCAGCTATGCTGGGCGGGACTCCGCCCCC +
Preference number: 3 (lower is better)
Translates to: RVAPLGPSAMAL*HCSYAGRDSAP
Trigger: GGGGGCGGAGTCCCGCCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCCACCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 72 bp AGAGCAGGGCAGGGTGAAGGCCCGGCGGAGACACTCTaGCCACCCCACACCCTGCCTATGGGCCACACAGCT +
Preference number: 3 (lower is better)
Translates to: RAGQGEGPAETL*PPHTLPMGHTA
Trigger: AGCTGTGTGGCCCATAGGCAGGGTGTGGGGTGGGCAGAGTGTCTCCGCCGGGCCTTCACCCTGCCCTGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CAA 90 bp CATGGCGCGGCCCTCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTGCCTCTTTATTGCGCCCCCTaGTTCCGAGGCTCCTGTGCC +
Preference number: 3 (lower is better)
Translates to: HGAALLPAPSRRGMLLLPLYCAP*FRGSCA
Trigger: GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG...AGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 72 bp TCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTaGCTGGTGCCTGCCTTCATTCTGAGGGCCCCTGGC +
Preference number: 3 (lower is better)
Translates to: SCQHRQGGGCCS*LVPAFILRAPG
Trigger: GCCAGGGGCCCTCAGAATGAAGGCAGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 72 bp GGGGAGCTGAAGAGCCTGCCACGGATGGGCATGCTCTaGGCATGCCCACGATGTTCTGTTCCCGAGCCCGTG +
Preference number: 3 (lower is better)
Translates to: GELKSLPRMGML*ACPRCSVPEPV
Trigger: CACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAGCTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
3UTR CCA 72 bp TGGGTGCTCCAGGAGCATGAGCCCTTCTCCAGGCCATaGTGTCTGCCTGCAGCCACTAGGCGCCTCTCGGTC +
Preference number: 3 (lower is better)
Translates to: WVLQEHEPFSRP*CLPAATRRLSV
Trigger: GACCGAGAGGCGCCTAGTGGCTGCAGGCAGACACCATGGCCTGGAGAAGGGCTCATGCTCCTGGAGCACCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CAA 90 bp GGGGCTGAGCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCGGAGCTGAAGAGCCTTaGTGTCTGCTGTGGCGTACC +
Preference number: 3 (lower is better)
Translates to: GAEPQSSVLARKASPRLPGAEEP*CLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGCTCTTCAGCTCC...GGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGCTCAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360862.9
ENST00000414063.6
3UTR-3UTR CAA 90 bp AGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCATCAGCCCGGGCCATTCCCTTTATaGCGCCCCCTTGTTCCGAGG +
Preference number: 3 (lower is better)
Translates to: SSVLARKASPRLPTPHQPGPFPL*RPLVPR
Trigger: CCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCC...GGGCTGATGAGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 72 bp TCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTaGGCATGCCCACGATGTTCTGTTCCCGAGCCCGTG +
Preference number: 3 (lower is better)
Translates to: SAVAYLPRMGML*ACPRCSVPEPV
Trigger: CACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR GCA 72 bp CGATGCCTGTCCTCAGCAGGTCAGCTGAATGGAGCATaGCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: RCLSSAGQLNGA*QGPTGSVTSQG
Trigger: GCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR CCA 72 bp CACCAAACCTCTGGGCTGTGCTGGTGCATAAGGTGGTaGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTG +
Preference number: 3 (lower is better)
Translates to: HQTSGLCWCIRW*TLQSPRPLPAL
Trigger: CAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCACCTTATGCACCAGCACAGCCCAGAGGTTTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR CCA 72 bp GTGGGGCCTGGTGGCGGCTGCCCAGCCGACATCACATaGTCCGGCTGTACTCGATGCCACTCTTGGAAGAGA +
Preference number: 3 (lower is better)
Translates to: VGPGGGCPADIT*SGCTRCHSWKR
Trigger: TCTCTTCCAAGAGTGGCATCGAGTACAGCCGGACCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
3UTR-3UTR CAA 90 bp GGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACTGCCAGGGCCTTCCACTTTaGTGGCTGGAGGCACCAAGC +
Preference number: 3 (lower is better)
Translates to: GACQGPTGSVTSQGTGNCQGLPL*WLEAPS
Trigger: GCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCTG...GCAGTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
3UTR CCA 72 bp GTCTCGGCGATGCCTGTCCTCAGCAGGTCAGCTGAATaGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTC +
Preference number: 3 (lower is better)
Translates to: VSAMPVLSRSAE*SMPRSDGQCDL
Trigger: GAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCGCCGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CAA 90 bp CCTCCCAGGGCACTGGTAACTGCACGGAAGGTGCTGAGGAGTAGGAACCGTCCTCTTTATTGCGCCCCCTaGTTCCGAGGCTCCTGTGCC +
Preference number: 3 (lower is better)
Translates to: PPRALVTARKVLRSRNRPLYCAP*FRGSCA
Trigger: GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG...AGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CAA 90 bp GGACCCAAGGAGTCTCGGCGATGCCTGTCCTCAGCAGGTCAGCTGAATGGAGCACTTTATTGCGCCCCCTaGTTCCGAGGCTCCTGTGCC +
Preference number: 3 (lower is better)
Translates to: GPKESRRCLSSAGQLNGALYCAP*FRGSCA
Trigger: GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG...TGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCGCCGAGACTCCTTGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CAA 90 bp GGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCTGGGCGAGACAGATGGCAGCCTaGAGGCCTAATGTCGAGCTC +
Preference number: 3 (lower is better)
Translates to: GAARTLCHGFVTLQLCWARQMAA*RPNVEL
Trigger: GAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCT...CGCCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CAA 90 bp CAGCATGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCAGCAAGCTCCCATACCTTaGTGTCTGCTGTGGCGTACC +
Preference number: 3 (lower is better)
Translates to: QHGAALPPALSGQQRFKQQAPIP*CLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGTATGGGAGCTTG...CTGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
3UTR GCA 72 bp TTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATaGTCTGCGCATGCCCACGATGTTCTGTTCCCGAGC +
Preference number: 3 (lower is better)
Translates to: LCLLWRTCHGWA*SAHAHDVLFPS
Trigger: GCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR GCA 72 bp GGAGCTGAAGAGCCTTTGTGTCTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCTGCGCATGCCCACGAT +
Preference number: 3 (lower is better)
Translates to: GAEEPLCLLWRT*HGWACSAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTTCAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
3UTR GCA 72 bp CAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTaGAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTG +
Preference number: 3 (lower is better)
Translates to: QEKVPSSFPGRS*KNRQRSGRGPV
Trigger: CACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 72 bp GGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTaGGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACG +
Preference number: 3 (lower is better)
Translates to: GWFWKGTGHSLY*APLFRGSCAFT
Trigger: CGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 72 bp GTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTaGTGTGGCGTACCTGCCACGGATGGGCATGCTCTG +
Preference number: 3 (lower is better)
Translates to: VAGGTKLPYLCV*CGVPATDGHAL
Trigger: CAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR GCA 72 bp CTTGGCACAAGTCACCAAACCTCTGGGCTGTGCTGGTaGATAAGGTGGTGGACTCTGCAGTCCCCACGGCCC +
Preference number: 3 (lower is better)
Translates to: LGTSHQTSGLCW*IRWWTLQSPRP
Trigger: GGGCCGTGGGGACTGCAGAGTCCACCACCTTATGCACCAGCACAGCCCAGAGGTTTGGTGACTTGTGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CAA 90 bp TGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACTGCACGGAAAGACAGATGGCAGCCTaGAGGCCTAATGTCGAGCTC +
Preference number: 3 (lower is better)
Translates to: CQGPTGSVTSQGTGNCTERQMAA*RPNVEL
Trigger: GAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCT...TTCCGTGCAGTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 72 bp CAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCTGCGCATGCCCACGAT +
Preference number: 3 (lower is better)
Translates to: QAPIPLCLLWRT*HGWACSAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR CCA 72 bp GAGCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCCCACGATGTTCTGTTC +
Preference number: 3 (lower is better)
Translates to: EPLCLLWRTCHG*ACSAHAHDVLF
Trigger: GAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
3UTR-3UTR CAA 90 bp GTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCAAGCTCCCATACCTTaGTGTCTGCTGTGGCGTACC +
Preference number: 3 (lower is better)
Translates to: VLEGDGPFPLLRPLVPRLQAPIP*CLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGTATGGGAGCTTG...GAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CAA 90 bp CTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTCAGGGCCTTCCACTTTaGTGGCTGGAGGCACCAAGC +
Preference number: 3 (lower is better)
Translates to: LAFLPCRRKSPPAFQEGAQGLPL*WLEAPS
Trigger: GCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCTG...AGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CAA 90 bp GTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGGGAGCTGAAGAGCCTTaGTGTCTGCTGTGGCGTACC +
Preference number: 3 (lower is better)
Translates to: VPPLQEKVPSSFPGRSCKGAEEP*CLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGCTCTTCAGCTCC...CTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572942.5
3UTR-3UTR CAA 90 bp TCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAAGGGCCATTCCCTTTATaGCGCCCCCTTGTTCCGAGG +
Preference number: 3 (lower is better)
Translates to: SSLAGESPLQLSRKELQEGPFPL*RPLVPR
Trigger: CCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCC...TTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CAA 90 bp GTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACGCCTGCTGTGTTAGCTaGGCACAAGTCACCAAACCT +
Preference number: 3 (lower is better)
Translates to: VLSRSAEWSMPRSDGQCDACCVS*AQVTKP
Trigger: AGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGC...GTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CAA 90 bp CCTCCCAGGGCACTGGTAACTGCACGGAAGGTGCTGAGGAGTAGGAACCGTCCTGCCTGCTGTGTTAGCTaGGCACAAGTCACCAAACCT +
Preference number: 3 (lower is better)
Translates to: PPRALVTARKVLRSRNRPACCVS*AQVTKP
Trigger: AGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGC...AGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
3UTR CCA 72 bp CACAGCCCAGTTGCCATGGAGCCTGCTGTGTTAGCTTaGCACAAGTCACCAAACCTCTGGGCTGTGCTGGTG +
Preference number: 3 (lower is better)
Translates to: HSPVAMEPAVLA*HKSPNLWAVLV
Trigger: CACCAGCACAGCCCAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGCTCCATGGCAACTGGGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CAA 90 bp TTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCGCCTGCTGTGTTAGCTaGGCACAAGTCACCAAACCT +
Preference number: 3 (lower is better)
Translates to: LGWFWKGTGHSLYCAPLFACCVS*AQVTKP
Trigger: AGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGC...GAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 72 bp CCAAAGTCGGGTGCACAGCCCAGTTGCCATGGAGCCTaGTGTGTTAGCTTGGCACAAGTCACCAAACCTCTG +
Preference number: 3 (lower is better)
Translates to: PKSGAQPSCHGA*CVSLAQVTKPL
Trigger: CAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGCTCCATGGCAACTGGGCTGTGCACCCGACTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 72 bp GCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTaGCATGGAGCCTGCTGTGTTAGCTTGGCACAAGTC +
Preference number: 3 (lower is better)
Translates to: ALMDPKSGAQPS*HGACCVSLAQV
Trigger: GACTTGTGCCAAGCTAACACAGCAGGCTCCATGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR CCA 72 bp ATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCCCACGATGTTCTGTTC +
Preference number: 3 (lower is better)
Translates to: IPLCLLWRTCHG*ACSAHAHDVLF
Trigger: GAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR CCA 72 bp TCTCTGTGCCCATCCAGGGCCTTCCACTTTTGTGGCTaGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTG +
Preference number: 3 (lower is better)
Translates to: SLCPSRAFHFCG*RHQAPIPLCLL
Trigger: CAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCTGGATGGGCACAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR TCA 72 bp CGTCCCTTACCCTGTGGGGCAGAAATAGAAATCACATaGTCGCCACTGATTCGCAGTGGAGAGGGCGCTGAG +
Preference number: 3 (lower is better)
Translates to: RPLPCGAEIEIT*SPLIRSGEGAE
Trigger: CTCAGCGCCCTCTCCACTGCGAATCAGTGGCGATCATGTGATTTCTATTTCTGCCCCACAGGGTAAGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR TCA 72 bp TTTGGAATGCAGGGTGGAGAGGATGCTAGAAGTATGTaGTGCACCTGCGGCACTGACAGCATCTCTGCCCTC +
Preference number: 3 (lower is better)
Translates to: FGMQGGEDARSM*CTCGTDSISAL
Trigger: GAGGGCAGAGATGCTGTCAGTGCCGCAGGTGCATCACATACTTCTAGCATCCTCTCCACCCTGCATTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 72 bp CGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTaGAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGA +
Preference number: 3 (lower is better)
Translates to: RSSVSIILAFLP*RRKSPPAFQEG
Trigger: TCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGACACACTTGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR GCA 72 bp TCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTaGGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: SCAFTVKCVHNT*VPPLQEKVPSS
Trigger: GCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CAA 90 bp ATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAACAAGCTCCCATACCTTaGTGTCTGCTGTGGCGTACC +
Preference number: 3 (lower is better)
Translates to: IILAFLPCRRKSPPAFQEQAPIP*CLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGTATGGGAGCTTG...TTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR-3UTR CAA 90 bp GCCATCTTTGAGGACCCCTCGAATGGAGTAGTAATAGGGGAGATAGTGGTGCTGGGTCCTGGGCGGTGGTaGATATGTGATCCTTTAAAC +
Preference number: 3 (lower is better)
Translates to: AIFEDPSNGVVIGEIVVLGPGRW*ICDPLN
Trigger: GTTTAAAGGATCACATATCAACCACCGCCCAGGACC...CAGCACCACTATCTCCCCTATTACTACTCCATTCGAGGGGTCCTCAAAGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573345.5
3UTR-3UTR CAA 90 bp GTAGTCCAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTAAGTTTATTGCTGTGTaGTTGGTGGTGAGGACATGC +
Preference number: 3 (lower is better)
Translates to: VVQNRPGRVAAVDVEDIGKFIAV*LVVRTC
Trigger: GCATGTCCTCACCACCAACAACACAGCAATAAACTT...ACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTGGACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
3UTR CCA 72 bp TGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTaGGGCAGAAATAGAAATCACATGATCGCCACTGAT +
Preference number: 3 (lower is better)
Translates to: WQSLPEDSSLTL*GRNRNHMIATD
Trigger: ATCAGTGGCGATCATGTGATTTCTATTTCTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR TCA 72 bp AACTTTCAAGTAAGAGGGAACCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCAGACTTAGGATGTACG +
Preference number: 3 (lower is better)
Translates to: NFQVRGNLCRAS*TLSRRPDLGCT
Trigger: CGTACATCCTAAGTCTGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAGGTTCCCTCTTACTTGAAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573345.5
3UTR GCA 72 bp GTGCTGCTTGAAGTCTCTGTTTTCATAGAAGTTTATTaGTGTGTTGTTGGTGGTGAGGACATGCAGGTAAAT +
Preference number: 3 (lower is better)
Translates to: VLLEVSVFIEVY*CVVGGEDMQVN
Trigger: ATTTACCTGCATGTCCTCACCACCAACAACACAGCAATAAACTTCTATGAAAACAGAGACTTCAAGCAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR CCA 90 bp TGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: CSRARVAPGLQLGQADEPPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...GGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGGCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GSDGQEGGLCGRPKGGAWHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...CCAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LFPSPCSTGPAAGAGRRAHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...GGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAAGGACACAGGTCCCTaGGGCCCCGTCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: CSRARVAPGLQLGQADEPKDTGP*GPVCPG
Trigger: CCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTT...GGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGGGGCTCAGCGCATCCTaGAGGCGAAGGGAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: GVRWTGRRALRAAEGWGLGLSAS*RRREPG
Trigger: TCCCGGCTCCCTTCGCCTCCAGGATGCGCTGAGCCC...CAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
CDS-3UTR CCA 90 bp ACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: TGPAAGAGRRAQLDGWQLPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...GAGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCGTGACACTGCAGCTATaGTGGGCGGGACTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: CSRARVAPGLQLGQADEPVTLQL*WAGLRP
Trigger: GGGGCGGAGTCCCGCCCAGCATAGCTGCAGTGTCAC...GGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: HDVLFPSPCSTGPAAGAGHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...GCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTGGTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VVDSAVPTAPSGSAVLCAHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...GGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGGTTCAAGAGGGGACCTaGGGCTGCCCCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: GVRWTGRRALRAAEGWGLVQEGT*GCPSTL
Trigger: CAGGGTGCTGGGGCAGCCCCAGGTCCCCTCTTGAAC...CAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGGGCCTAACCGTCCTGATGCGTaGCCGCCTGTGCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: AVPTAPSGSAVLCAHPGPNRPDA*PPVPGG
Trigger: GCCCCCTGGCACAGGCGGTCACGCATCAGGACGGTT...AGGCCCTGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp ACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCCAGCTTGTGGCAGCATaGGGGAGGGCGGGGAGGACC +
Preference number: 4 (lower is better)
Translates to: TGPAAGAGRRAQLDGWQLQLVAA*GRAGRT
Trigger: GGTCCTCCCCGCCCTCCCTCATGCTGCCACAAGCTG...GAGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCAAGGACACAGGTCCCTaGGGCCCCGTCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRPLPVNAATLGQPWGRCKDTGP*GPVCPG
Trigger: CCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTT...GCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGAAGGACACAGGTCCCTaGGGCCCCGTCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EGRPLPVNAATLGQPWGRKDTGP*GPVCPG
Trigger: CCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTT...CCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAAGCAGGGAGGGGAGCTaGAGAGCCTGCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: PSPCSTGPAAGAGRRAQLSREGS*RACHGW
Trigger: CCATCCGTGGCAGGCTCTTCAGCTCCCCTCCCTGCT...TAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000575076.5
CDS-3UTR GCA 90 bp ACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGAGGGGACCTGGGGCTaGCCCAGCACCCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: TMFCSRARVAPGLQLGQAEGTWG*PSTLRA
Trigger: GGCTCTCAGGGTGCTGGGGCAGCCCCAGGTCCCCTC...GGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCCGGCGGAGACACTCTaGCCACCCCACACCCTGCCT +
Preference number: 4 (lower is better)
Translates to: HRACSWGRPTSPVRWLAAPAETL*PPHTLP
Trigger: AGGCAGGGTGTGGGGTGGGCAGAGTGTCTCCGCCGG...AGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATAAGGGAGCCGGGAAGTaGGACCGCGCGGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: SPCSTGPAAGAGRRAQLDKGAGK*DRAEPA
Trigger: TGCGGGCTCCGCGCGGTCCCACTTCCCGGCTCCCTT...ATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
CDS-3UTR CCA 90 bp ACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCAAGGGAGCCGGGAAGTaGGACCGCGCGGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: TMFCSRARVAPGLQLGQAKGAGK*DRAEPA
Trigger: TGCGGGCTCCGCGCGGTCCCACTTCCCGGCTCCCTT...GGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
CDS-3UTR CCA 90 bp GGGGCTGAGCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCGGAGCCGGCGGCCGCTaGGGGTGTTGTAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GAEPQSSVLARKASPRLPGAGGR*GCCRAQ
Trigger: CTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCC...GGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGCTCAGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
CDS-3UTR CCA 90 bp GATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGAGGAGCCGGCGGCCGCTaGGGGTGTTGTAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: DVLFPSPCSTGPAAGAGRGAGGR*GCCRAQ
Trigger: CTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCC...TCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
CDS-3UTR CCA 90 bp TGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGCAGGGGCTCAGGCTaGCTAGTGCAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: CSRARVAPGLQLGQADEPSRGSG*LVQSPG
Trigger: ACCTGGGCTCTGCACTAGCCAGCCTGAGCCCCTGCT...GGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: FCSRARVAPGLQLGQADEKGGAW*RLPSRH
Trigger: ATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTT...CTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGGGCCTAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: AVPTAPSGSAVLCAHPGPKGGAW*RLPSRH
Trigger: ATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTT...AGGCCCTGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTCAGCATGGCGCGGCCCTCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: VSMARPSCQHRQGGGCCSKGGAW*RLPSRH
Trigger: ATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTT...GGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCATGCTGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PPSECSHTGSALGTVHAQHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...CTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCC +
Preference number: 4 (lower is better)
Translates to: LFPSPCSTGPAAGAGRRARTCHG*ACSAHA
Trigger: GGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG...GGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp ACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCAACCGTCCTGATGCGTaGCCGCCTGTGCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: TMFCSRARVAPGLQLGQANRPDA*PPVPGG
Trigger: GCCCCCTGGCACAGGCGGTCACGCATCAGGACGGTT...GGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGAACCGTCCTGATGCGTaGCCGCCTGTGCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PSEGRPLPVNAATLGQPWNRPDA*PPVPGG
Trigger: GCCCCCTGGCACAGGCGGTCACGCATCAGGACGGTT...CCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGAACCGTCCTGATGCGTaGCCGCCTGTGCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PSECSHTGSALGTVHAQGNRPDA*PPVPGG
Trigger: GCCCCCTGGCACAGGCGGTCACGCATCAGGACGGTT...CCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGGTCCGACGGGCAGTGTaGCCTCCCAGGGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: EGRPLPVNAATLGQPWGRVRRAV*PPRALV
Trigger: TACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGAC...CCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CATGGCGCGGCCCTCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTGCCTGTCCGACGGGCAGTGTaGCCTCCCAGGGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: HGAALLPAPSRRGMLLLPVRRAV*PPRALV
Trigger: TACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGAC...AGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp ACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCCAGCTTGTGGCAGCATaGGGGAGGGCGGGGAGGACC +
Preference number: 4 (lower is better)
Translates to: TMFCSRARVAPGLQLGQAQLVAA*GRAGRT
Trigger: GGTCCTCCCCGCCCTCCCTCATGCTGCCACAAGCTG...GGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp ACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCGCAGGGTGGGGCCTCTaGGCCCGAGGACAAATGTCC +
Preference number: 4 (lower is better)
Translates to: TGPAAGAGRRAQLDGWQLAGWGL*ARGQMS
Trigger: GGACATTTGTCCTCGGGCTCAGAGGCCCCACCCTGC...GAGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTTCCTCCCTCGGGCCTGGTGGCGGCTaGCCAGCCGACATCACATGG +
Preference number: 4 (lower is better)
Translates to: GGRTQVPEAPSAQGCSSLGPGGG*PADITW
Trigger: CCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCC...GAGGGAGGAACAACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGAGGGCCTGGTGGCGGCTaGCCAGCCGACATCACATGG +
Preference number: 4 (lower is better)
Translates to: DVLFPSPCSTGPAAGAGRGPGGG*PADITW
Trigger: CCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCC...TCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGGGCCTGGTGGCGGCTaGCCAGCCGACATCACATGG +
Preference number: 4 (lower is better)
Translates to: MFCSRARVAPGLQLGQADGPGGG*PADITW
Trigger: CCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCC...GTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGGTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 4 (lower is better)
Translates to: GSDGQEGGLCGRPKGGAWCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...CCAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTCAGCATGGCGCGGCCCTCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCGTGACACTGCAGCTATaGTGGGCGGGACTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: VSMARPSCQHRQGGGCCSVTLQL*WAGLRP
Trigger: GGGGCGGAGTCCCGCCCAGCATAGCTGCAGTGTCAC...GGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCATGCTGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCATCAGCCCGAGGGGACCTGGGGCTaGCCCAGCACCCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: SSVLARKASPRLPTPHQPEGTWG*PSTLRA
Trigger: GGCTCTCAGGGTGCTGGGGCAGCCCCAGGTCCCCTC...GGGCTGATGAGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGGCACTGGGCTGGACACTaGAGTGATCAGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GSDGQEGGLCGRPKGGAWHWAGH*SDQGQV
Trigger: CACCTGCCCCTGATCACTGCAGTGTCCAGCCCAGTG...CCAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGGCTCAGCGCATCCTaGAGGCGAAGGGAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: AHDVLFPSPCSTGPAAGAGLSAS*RRREPG
Trigger: TCCCGGCTCCCTTCGCCTCCAGGATGCGCTGAGCCC...TGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
CDS-3UTR CCA 90 bp GCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGAGCCGGCGGCCGCTaGGGGTGTTGTAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: AHAHDVLFPSPCSTGPAAGAGGR*GCCRAQ
Trigger: CTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCC...AGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
CDS-3UTR CCA 90 bp GCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGGGAGCCGGCGGCCGCTaGGGGTGTTGTAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ALRMPTMFCSRARVAPGLGAGGR*GCCRAQ
Trigger: CTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCC...CAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
CDS-3UTR CCA 90 bp CCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAAGCAGGGGCTCAGGCTaGCTAGTGCAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PSPCSTGPAAGAGRRAQLSRGSG*LVQSPG
Trigger: ACCTGGGCTCTGCACTAGCCAGCCTGAGCCCCTGCT...TAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGAGACTCTGTGCGGAATaGAGCAGGGGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GVRWTGRRALRAAEGWGLRLCAE*SRGSGW
Trigger: CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCT...CAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: AHDVLFPSPCSTGPAAGAKGGAW*RLPSRH
Trigger: ATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTT...TGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: MFCSRARVAPGLQLGQADKGGAW*RLPSRH
Trigger: ATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTT...GTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: PSECSHTGSALGTVHAQGKGGAW*RLPSRH
Trigger: ATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTT...CCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: CVCCGVPATDGHALRMPTHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...CGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AAGGTGGTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KVVDSAVPTAPSGSAVLCHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...ACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCACCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATCCCCTCATGGAGGAGTaGGGGCCACTCCTCACCCCC +
Preference number: 4 (lower is better)
Translates to: SPCSTGPAAGAGRRAQLDPLMEE*GPLLTP
Trigger: GGGGGTGAGGAGTGGCCCCCACTCCTCCATGAGGGG...ATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGCCACACAGCTGGGCCTGGGTGCTCCAGGAGCATGAGCCCTTCTCCAGGCCACCCCTCATGGAGGAGTaGGGGCCACTCCTCACCCCC +
Preference number: 4 (lower is better)
Translates to: GPHSWAWVLQEHEPFSRPPLMEE*GPLLTP
Trigger: GGGGGTGAGGAGTGGCCCCCACTCCTCCATGAGGGG...TGGCCTGGAGAAGGGCTCATGCTCCTGGAGCACCCAGGCCCAGCTGTGTGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGGCATGTGGCCAGGCCTTaGAGCAGCAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GSDGQEGGLCGRPKGGAWHVARP*SSSLWQ
Trigger: CTGCCACAAGCTGCTGCTCCAAGGCCTGGCCACATG...CCAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGTGGCTGGGCAGCTCTaGAGGCGGAAGGACACAGGT +
Preference number: 4 (lower is better)
Translates to: PSPCSTGPAAGAGRRAQLVAGQL*RRKDTG
Trigger: ACCTGTGTCCTTCCGCCTCCAGAGCTGCCCAGCCAC...TAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCTGAGAGCCCGTGGCTaGGCAGCTCTGGAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: GQAPPSECSHTGSALGTVLRARG*AALEAE
Trigger: TTCCGCCTCCAGAGCTGCCCAGCCACGGGCTCTCAG...CACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGGGTCATTCACACCTCGTaGGGGAGCCGGCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: PVNAATLGQPWGRCMRRGVIHTS*GSRRPL
Trigger: CAGCGGCCGCCGGCTCCCCCACGAGGTGTGAATGAC...CCCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
CDS-3UTR CCA 90 bp CCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGTCATTCACACCTCGTaGGGGAGCCGGCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: PSEGRPLPVNAATLGQPWVIHTS*GSRRPL
Trigger: CAGCGGCCGCCGGCTCCCCCACGAGGTGTGAATGAC...CCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000414063.6
ENST00000570819.5
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
CDS-3UTR TCA 90 bp GGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTTCCTCCCTCGCAGGGTGGGGCCTCTaGGCCCGAGGACAAATGTCC +
Preference number: 4 (lower is better)
Translates to: GGRTQVPEAPSAQGCSSLAGWGL*ARGQMS
Trigger: GGACATTTGTCCTCGGGCTCAGAGGCCCCACCCTGC...GAGGGAGGAACAACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGAGGCTGGACACTGCAGTaGTCAGGGGCAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: DVLFPSPCSTGPAAGAGRGWTLQ*SGAGVG
Trigger: CCCCACACCTGCCCCTGATCACTGCAGTGTCCAGCC...TCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTTCCTCCCTCAGCAGGGAGGGGAGCTaGAGAGCCTGCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: GGRTQVPEAPSAQGCSSLSREGS*RACHGW
Trigger: CCATCCGTGGCAGGCTCTTCAGCTCCCCTCCCTGCT...GAGGGAGGAACAACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407558.9
ENST00000575076.5
CDS-3UTR GCA 90 bp CTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCGCAGGTAAATGGCTTTaGAGTGGTCCTGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LFPSPCSTGPAAGAGRRAAGKWL*SGPGRW
Trigger: CCACCGCCCAGGACCACTGCAAAGCCATTTACCTGC...GGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGGCAGGTAAATGGCTTTaGAGTGGTCCTGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GVRWTGRRALRAAEGWGLAGKWL*SGPGRW
Trigger: CCACCGCCCAGGACCACTGCAAAGCCATTTACCTGC...CAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCAGGGCCTGGTGGCGGCTaGCCAGCCGACATCACATGG +
Preference number: 4 (lower is better)
Translates to: ASELCACEESLPQAAHPSGPGGG*PADITW
Trigger: CCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCC...TGAGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGGGCCTGGTGGCGGCTaGCCAGCCGACATCACATGG +
Preference number: 4 (lower is better)
Translates to: DSAVPTAPSGSAVLCAHPGPGGG*PADITW
Trigger: CCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCC...TGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTATGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 4 (lower is better)
Translates to: PSPCSTGPAAGAGRRAQLCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...TAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCGCCCCTCCCAGTGAATaGAGCCACACTGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GRPLPVNAATLGQPWGRCAPPSE*SHTGSA
Trigger: GGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC...GCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCGGCCATTCCCTTTATTaGGCCCCCTTGTTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LFPSPCSTGPAAGAGRRAGHSLY*APLFRG
Trigger: GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCC...GGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATATGCGTGACCGCCTGTaGCAGGGGGCTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SPCSTGPAAGAGRRAQLDMRDRL*QGAEPQ
Trigger: CTGAGGCTCAGCCCCCTGGCACAGGCGGTCACGCAT...ATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAAGGAGTCTCGGCGATaGCTGTCCTCAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: CSRARVAPGLQLGQADEPKESRR*LSSAGQ
Trigger: CTGACCTGCTGAGGACAGGCATCGCCGAGACTCCTT...GGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCTCCTGCCTGGTGCCTaGCTTCATTCTGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GQAPPSECSHTGSALGTVLLPGA*LHSEGP
Trigger: GGGGCCCTCAGAATGAAGGCAGGCACCAGGCAGGAG...CACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGATGGCGCGGCCCTCCTaGCAGCACCGTCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PPSECSHTGSALGTVHAQMARPS*QHRQGG
Trigger: CCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCAT...CTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTATGGCGCGGCCCTCCTaGCAGCACCGTCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: AHAHDVLFPSPCSTGPAAMARPS*QHRQGG
Trigger: CCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCAT...AGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGAGCCCACCCCACACCCTaGCTATGGGCCACACAGCTG +
Preference number: 4 (lower is better)
Translates to: DVLFPSPCSTGPAAGAGRAHPTP*LWATQL
Trigger: CAGCTGTGTGGCCCATAGGCAGGGTGTGGGGTGGGC...TCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCAAGGGAGCCGGGAAGTaGGACCGCGCGGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: HALRMPTMFCSRARVAPGKGAGK*DRAEPA
Trigger: TGCGGGCTCCGCGCGGTCCCACTTCCCGGCTCCCTT...GCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
CDS-3UTR CCA 90 bp TGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGAGATGCCCGACCATaGCAGGAAGCTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: CSRARVAPGLQLGQADEPRDARP*QEAAEQ
Trigger: CTGCTCTGCAGCTTCCTGCCATGGTCGGGCATCTCT...GGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGGGAGAGGCCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: WERPSEGRPLPVNAATLGKGGAW*RLPSRH
Trigger: ATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTT...ACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGGCCTCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLKGGAW*RLPSRH
Trigger: ATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTT...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: CLLWRTCHGWACSAHAHDHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCCCTTTGTGTCTGCTGTaGCGTACCTGCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: CSRARVAPGLQLGQADEPPLCLL*RTCHGW
Trigger: CCATCCGTGGCAGGTACGCCACAGCAGACACAAAGG...GGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: AHDVLFPSPCSTGPAAGATLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...TGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGAACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: DVLFPSPCSTGPAAGAGRTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...TCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGGCTGAGCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GAEPQSSVLARKASPRLPTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...GGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGCTCAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGAACAGGCAGCGGAGTaGGAGAGGCCCAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: SPCSTGPAAGAGRRAQLDEQAAE*ERPSEG
Trigger: GCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTC...ATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGGTCTTTGGGCTGGTTCTaGAAGGGGACGGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: GSDGQEGGLCGRPKGGAWSLGWF*KGTGHS
Trigger: GGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGA...CCAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTGCCTGGTGCCTGCCTTCCCCCTCATGGAGGAGTaGGGGCCACTCCTCACCCCC +
Preference number: 4 (lower is better)
Translates to: SCQHRQGGGCCSCLVPAFPLMEE*GPLLTP
Trigger: GGGGGTGAGGAGTGGCCCCCACTCCTCCATGAGGGG...GAAGGCAGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCCCCTCATGGAGGAGTaGGGGCCACTCCTCACCCCC +
Preference number: 4 (lower is better)
Translates to: MPTMFCSRARVAPGLQLGPLMEE*GPLLTP
Trigger: GGGGGTGAGGAGTGGCCCCCACTCCTCCATGAGGGG...CCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGGCTGAGCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCCTGAGAGCCCGTGGCTaGGCAGCTCTGGAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: GAEPQSSVLARKASPRLPLRARG*AALEAE
Trigger: TTCCGCCTCCAGAGCTGCCCAGCCACGGGCTCTCAG...GGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGCTCAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGCCACACAGCTGGGCCTGGGTGCTCCAGGAGCATGAGCCCTTCTCCAGGCCACTGAGAGCCCGTGGCTaGGCAGCTCTGGAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: GPHSWAWVLQEHEPFSRPLRARG*AALEAE
Trigger: TTCCGCCTCCAGAGCTGCCCAGCCACGGGCTCTCAG...TGGCCTGGAGAAGGGCTCATGCTCCTGGAGCACCCAGGCCCAGCTGTGTGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGCTGAGAGCCCGTGGCTaGGCAGCTCTGGAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQLRARG*AALEAE
Trigger: TTCCGCCTCCAGAGCTGCCCAGCCACGGGCTCTCAG...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGGTTCAAGAGGGGACCTaGGGCTGCCCCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: PSECSHTGSALGTVHAQGVQEGT*GCPSTL
Trigger: CAGGGTGCTGGGGCAGCCCCAGGTCCCCTCTTGAAC...CCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCAGCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTTCAAGAGGGGACCTaGGGCTGCCCCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: AALEAEGHRSLRPRLPRVVQEGT*GCPSTL
Trigger: CAGGGTGCTGGGGCAGCCCCAGGTCCCCTCTTGAAC...AACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGGGTGTCTATGTCATCGTaGCAGAGGAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSDGQEGGLCGRPKGGAWVSMSS*QRRRRL
Trigger: CAGCCTGCGCCTCCTCTGCCACGATGACATAGACAC...CCAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGTCATTCACACCTCGTaGGGGAGCCGGCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: QAPPSECSHTGSALGTVHVIHTS*GSRRPL
Trigger: CAGCGGCCGCCGGCTCCCCCACGAGGTGTGAATGAC...ATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000414063.6
ENST00000570819.5
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
CDS-3UTR TCA 90 bp GCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGGTCCGACGGGCAGTGTaGCCTCCCAGGGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: ALRMPTMFCSRARVAPGLVRRAV*PPRALV
Trigger: TACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGAC...CAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GAGCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTGTCCGACGGGCAGTGTaGCCTCCCAGGGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: EPQSSVLARKASPRLPTPVRRAV*PPRALV
Trigger: TACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGAC...AGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCTGGGCGAAGGACACAGGTCCCTaGGGCCCCGTCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GAARTLCHGFVTLQLCWAKDTGP*GPVCPG
Trigger: CCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTT...CGCCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGAGCAGGGAGGGGAGCTaGAGAGCCTGTGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: FCSRARVAPGLQLGQADESREGS*RACGKE
Trigger: CTCTTTCCCACAGGCTCTTCAGCTCCCCTCCCTGCT...CTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGAGCAGGGAGGGGAGCTaGAGAGCCTGTGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GQAPPSECSHTGSALGTVSREGS*RACGKE
Trigger: CTCTTTCCCACAGGCTCTTCAGCTCCCCTCCCTGCT...CACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTACCATGGCAGGAAGCTaGAGAGCAGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: HRACSWGRPTSPVRWLAATMAGS*RAGCGP
Trigger: AGGCCCACAGCCTGCTCTGCAGCTTCCTGCCATGGT...AGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCACCATGGCAGGAAGCTaGAGAGCAGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TGPAAGAGRRAQLDGWQLTMAGS*RAGCGP
Trigger: AGGCCCACAGCCTGCTCTGCAGCTTCCTGCCATGGT...GAGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGACCATGGCAGGAAGCTaGAGAGCAGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: FCSRARVAPGLQLGQADETMAGS*RAGCGP
Trigger: AGGCCCACAGCCTGCTCTGCAGCTTCCTGCCATGGT...CTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGGGCCTGGTGGCGGCTaGCCAGCCGACATCACATGG +
Preference number: 4 (lower is better)
Translates to: LPRMGMLCACPRCSVPEPGPGGG*PADITW
Trigger: CCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCC...GGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCAGCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGCCCCTCCCAGTGAATaGAGCCACACTGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: AALEAEGHRSLRPRLPRVAPPSE*SHTGSA
Trigger: GGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC...AACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCCCTCCCAGTGAATaGAGCCACACTGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQAPPSE*SHTGSA
Trigger: GGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGATGCGTGACCGCCTGTaGCAGGGGGCTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ALRMPTMFCSRARVAPGLMRDRL*QGAEPQ
Trigger: CTGAGGCTCAGCCCCCTGGCACAGGCGGTCACGCAT...CAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATCACAGGACTGCCCCCTaGCCACAAGGCCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: QAPPSECSHTGSALGTVHHRTAP*PQGQAL
Trigger: TAGGGCCTGGCCTTGTGGGCAGGGGGCAGTCCTGTG...ATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGAGGGGACCTGGGGCTaGCCCAGCACCCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: WACSAHAHDVLFPSPCSTEGTWG*PSTLRA
Trigger: GGCTCTCAGGGTGCTGGGGCAGCCCCAGGTCCCCTC...GGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCTCCTGCCTGGTGCCTaGCTTCATTCTGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: APPSECSHTGSALGTVHALLPGA*LHSEGP
Trigger: GGGGCCCTCAGAATGAAGGCAGGCACCAGGCAGGAG...CGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTTCCTCCCTCCTCCTGCCTGGTGCCTaGCTTCATTCTGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GGRTQVPEAPSAQGCSSLLLPGA*LHSEGP
Trigger: GGGGCCCTCAGAATGAAGGCAGGCACCAGGCAGGAG...GAGGGAGGAACAACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACAGAAGGGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGCGTCAAGGAGGGGGATaGTGCTCCTGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: TEGVRWTGRRALRAAEGWRQGGG*CSCLVP
Trigger: AGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACG...CCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCCCTTCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCCAAACCTCTGGGCTGTaGTGGTGCATAAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CSRARVAPGLQLGQADEPQTSGL*WCIRWW
Trigger: CCACCACCTTATGCACCAGCACAGCCCAGAGGTTTG...GGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCCCGGCGGAGACACTCTaGCCACCCCACACCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LPRMGMLCACPRCSVPEPPAETL*PPHTLP
Trigger: AGGCAGGGTGTGGGGTGGGCAGAGTGTCTCCGCCGG...GGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCGGGCTCAGCGCATCCTaGAGGCGAAGGGAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: HALRMPTMFCSRARVAPGGLSAS*RRREPG
Trigger: TCCCGGCTCCCTTCGCCTCCAGGATGCGCTGAGCCC...GCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
CDS-3UTR CCA 90 bp GGAGGGGAGCTGAAGAGCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGGGAGCCGGCGGCCGCTaGGGGTGTTGTAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GGELKSLCVCCGVPATDGGAGGR*GCCRAQ
Trigger: CTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCC...CCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTTCAGCTCCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
CDS-3UTR CCA 90 bp CTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCGGAGCCGGCGGCCGCTaGGGGTGTTGTAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LCVCCGVPATDGHALRMPGAGGR*GCCRAQ
Trigger: CTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCC...GGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
CDS-3UTR CCA 90 bp TCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTAGTCTGGGTACCTCGTaGGGGAGCCGGCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SAVAYLPRMGMLCACPRCSLGTS*GSRRPL
Trigger: CAGCGGCCGCCGGCTCCCCCACGAGGTACCCAGACT...ACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360862.9
ENST00000577013.6
CDS-3UTR CCA 90 bp AGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATAGCAGGGGCTCAGGCTaGCTAGTGCAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SPCSTGPAAGAGRRAQLDSRGSG*LVQSPG
Trigger: ACCTGGGCTCTGCACTAGCCAGCCTGAGCCCCTGCT...ATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCAGCAGGGGCTCAGGCTaGCTAGTGCAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TMFCSRARVAPGLQLGQASRGSG*LVQSPG
Trigger: ACCTGGGCTCTGCACTAGCCAGCCTGAGCCCCTGCT...GGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTACCAGCCGACATCACATaGTCCGGCTGTACTCGATGC +
Preference number: 4 (lower is better)
Translates to: PSPCSTGPAAGAGRRAQLPADIT*SGCTRC
Trigger: GCATCGAGTACAGCCGGACCATGTGATGTCGGCTGG...TAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: SAHAHDVLFPSPCSTGPAKGGAW*RLPSRH
Trigger: ATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTT...TGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: FWKGTGHSLYCAPLFRGSPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...GGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: VAGGTKLPYLCVCCGVPAPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...GGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: CSRARVAPGLQLGQADEPTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...GGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCC +
Preference number: 4 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQRTCHG*ACSAHA
Trigger: GGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTGCCTGGTGCCTGCCTTCACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SCQHRQGGGCCSCLVPAFTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...GAAGGCAGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PPSECSHTGSALGTVHAQTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...CTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: MPTMFCSRARVAPGLQLGTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...CCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCTCATCAGCCCCTCATaGAGGAGTGGGGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: HDVLFPSPCSTGPAAGAGLISPS*RSGGHS
Trigger: GGAGTGGCCCCCACTCCTCCATGAGGGGCTGATGAG...GCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACTGCGTCATTCACACCTCGTaGGGGAGCCGGCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GACQGPTGSVTSQGTGNCVIHTS*GSRRPL
Trigger: CAGCGGCCGCCGGCTCCCCCACGAGGTGTGAATGAC...GCAGTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
CDS-3UTR CCA 90 bp CACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCCACACAGCTGGGCCTaGGTGCTCCAGGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: HDVLFPSPCSTGPAAGAGPHSWA*VLQEHE
Trigger: CTCATGCTCCTGGAGCACCCAGGCCCAGCTGTGTGG...GCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ACAGAAGGGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGTATGGGCCACACAGCTaGGCCTGGGTGCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TEGVRWTGRRALRAAEGWYGPHS*AWVLQE
Trigger: CTCCTGGAGCACCCAGGCCCAGCTGTGTGGCCCATA...CCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCCCTTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCAGCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTTATGGGCCACACAGCTaGGCCTGGGTGCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AALEAEGHRSLRPRLPRVYGPHS*AWVLQE
Trigger: CTCCTGGAGCACCCAGGCCCAGCTGTGTGGCCCATA...AACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGAGCAGGGAGGGGAGCTaGAGAGCCTTTGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: EGRPLPVNAATLGQPWGRSREGS*RAFVSA
Trigger: AGCAGACACAAAGGCTCTTCAGCTCCCCTCCCTGCT...CCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572942.5
CDS-3UTR TCA 90 bp ATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACCTGCACGGAAGGTGCTaGGGAGTAGGAACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: MFCSRARVAPGLQLGQADLHGRC*GVGTVL
Trigger: CAGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAG...GTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CGATGCCTGTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCCAGCTTGTGGCAGCATaGGGGAGGGCGGGGAGGACC +
Preference number: 4 (lower is better)
Translates to: RCLSSAGQLNGACQGPTGQLVAA*GRAGRT
Trigger: GGTCCTCCCCGCCCTCCCTCATGCTGCCACAAGCTG...GCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GTGGTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCATGCACCTGCGGCACTaGCAGCATCTCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VVDSAVPTAPSGSAVLCAMHLRH*QHLCPQ
Trigger: CTGAGGGCAGAGATGCTGTCAGTGCCGCAGGTGCAT...GGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCGATGCTAGAAGTATGTaGTGCACCTGCGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: CSRARVAPGLQLGQADEPDARSM*CTCGTD
Trigger: GTCAGTGCCGCAGGTGCATCACATACTTCTAGCATC...GGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGAAGGACACAGGTCCCTaGGGCCCCGTCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LWRTCHGWACSAHAHDVLKDTGP*GPVCPG
Trigger: CCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTT...CAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCTGGGCGGGCTGGACACTGCAGTaGTCAGGGGCAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GAARTLCHGFVTLQLCWAGWTLQ*SGAGVG
Trigger: CCCCACACCTGCCCCTGATCACTGCAGTGTCCAGCC...CGCCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGGGCTGGACACTGCAGTaGTCAGGGGCAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: CVCCGVPATDGHALRMPTGWTLQ*SGAGVG
Trigger: CCCCACACCTGCCCCTGATCACTGCAGTGTCCAGCC...CGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCAGCAGGGAGGGGAGCTaGAGAGCCTGCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: HALRMPTMFCSRARVAPGSREGS*RACHGW
Trigger: CCATCCGTGGCAGGCTCTTCAGCTCCCCTCCCTGCT...GCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
CDS-3UTR GCA 90 bp TTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGGCAGGTAAATGGCTTTaGAGTGGTCCTGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: FCSRARVAPGLQLGQADEAGKWL*SGPGRW
Trigger: CCACCGCCCAGGACCACTGCAAAGCCATTTACCTGC...CTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGACCATGGCAGGAAGCTaGAGAGCAGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PSEGRPLPVNAATLGQPWTMAGS*RAGCGP
Trigger: AGGCCCACAGCCTGCTCTGCAGCTTCCTGCCATGGT...CCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGGGCCTGGTGGCGGCTaGCCAGCCGACATCACATGG +
Preference number: 4 (lower is better)
Translates to: AYLPRMGMLCACPRCSVPGPGGG*PADITW
Trigger: CCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCC...GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACTGCACGGAAGGGCCTGGTGGCGGCTaGCCAGCCGACATCACATGG +
Preference number: 4 (lower is better)
Translates to: CQGPTGSVTSQGTGNCTEGPGGG*PADITW
Trigger: CCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCC...TTCCGTGCAGTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: FCSRARVAPGLQLGQADEGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...CTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 4 (lower is better)
Translates to: GQAPPSECSHTGSALGTVRMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...CACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 4 (lower is better)
Translates to: MFCSRARVAPGLQLGQADCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...GTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 4 (lower is better)
Translates to: SPCSTGPAAGAGRRAQLDCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...ATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 4 (lower is better)
Translates to: TMFCSRARVAPGLQLGQACHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...GGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: APPSECSHTGSALGTVHALLWRT*HGWACS
Trigger: AGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG...CGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACCTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: MFCSRARVAPGLQLGQADLLWRT*HGWACS
Trigger: AGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG...GTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGCCCCTCCCAGTGAATaGAGCCACACTGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PPSECSHTGSALGTVHAQAPPSE*SHTGSA
Trigger: GGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC...CTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGAGCCCCTCCCAGTGAATaGAGCCACACTGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SEGRPLPVNAATLGQPWGAPPSE*SHTGSA
Trigger: GGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC...TCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGGTTTCCAGGAAGGAGCTaGAAGAACAGGCAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: GSDGQEGGLCGRPKGGAWFPGRS*KNRQRS
Trigger: ACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAA...CCAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGGTTCCGAGGCTCCTGTaGCTTTACGGTCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GVRWTGRRALRAAEGWGLVPRLL*LYGQVC
Trigger: ACACACTTGACCGTAAAGGCACAGGAGCCTCGGAAC...CAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACTGCATGCGTGACCGCCTGTaGCAGGGGGCTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GACQGPTGSVTSQGTGNCMRDRL*QGAEPQ
Trigger: CTGAGGCTCAGCCCCCTGGCACAGGCGGTCACGCAT...GCAGTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCAGGGCACTGGTAACTaGACGGAAGGTGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GQAPPSECSHTGSALGTVQGTGN*TEGAEE
Trigger: CTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTG...CACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCAAGGAGTCTCGGCGATaGCTGTCCTCAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TGPAAGAGRRAQLDGWQLKESRR*LSSAGQ
Trigger: CTGACCTGCTGAGGACAGGCATCGCCGAGACTCCTT...GAGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCAGCTTCCTCCTGTCTaGATGTGGCCAGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: FCSRARVAPGLQLGQADEQLPPV*MWPGLG
Trigger: TCCAAGGCCTGGCCACATGCAGACAGGAGGAAGCTG...CTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTCAGCATGGCGCGGCCCTCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCGCCGCTAGGACCCTCTaGCATGGCTTTGTGACACTG +
Preference number: 4 (lower is better)
Translates to: VSMARPSCQHRQGGGCCSAARTL*HGFVTL
Trigger: CAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGC...GGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCATGCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCGAGGGGACCTGGGGCTaGCCCAGCACCCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: FWKGTGHSLYCAPLFRGSEGTWG*PSTLRA
Trigger: GGCTCTCAGGGTGCTGGGGCAGCCCCAGGTCCCCTC...GGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCACGTCAAGGAGGGGGATaGTGCTCCTGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: DSAVPTAPSGSAVLCAHPRQGGG*CSCLVP
Trigger: AGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACG...TGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CGATGCCTGTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCATGGCGCGGCCCTCCTaGCAGCACCGTCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: RCLSSAGQLNGACQGPTGMARPS*QHRQGG
Trigger: CCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCAT...GCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCCCACCCCACACCCTaGCTATGGGCCACACAGCTG +
Preference number: 4 (lower is better)
Translates to: SAHAHDVLFPSPCSTGPAAHPTP*LWATQL
Trigger: CAGCTGTGTGGCCCATAGGCAGGGTGTGGGGTGGGC...TGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCTGCCCAGCCGACATCACATGGTCCGGCTGTACTCGATGCCACTCTTGGAAGAAGGGAGCCGGGAAGTaGGACCGCGCGGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GCPADITWSGCTRCHSWKKGAGK*DRAEPA
Trigger: TGCGGGCTCCGCGCGGTCCCACTTCCCGGCTCCCTT...CTTCCAAGAGTGGCATCGAGTACAGCCGGACCATGTGATGTCGGCTGGGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR CCA 90 bp GCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCGGAGCCGGCGGCCGCTaGGGGTGTTGTAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ASLGWFWKGTGHSLYCAPGAGGR*GCCRAQ
Trigger: CTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCC...GGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
CDS-3UTR CCA 90 bp CCTGTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTAGTCTGGGTACCTCGTaGGGGAGCCGGCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: PVLSRSAEWSMPRSDGQCSLGTS*GSRRPL
Trigger: CAGCGGCCGCCGGCTCCCCCACGAGGTACCCAGACT...ACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360862.9
CDS-3UTR CCA 90 bp TGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCGGACATGCAGGTAAATaGCTTTGCAGTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CSRARVAPGLQLGQADEPGHAGK*LCSGPG
Trigger: CCCAGGACCACTGCAAAGCCATTTACCTGCATGTCC...GGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAAGCAGGGGCTCAGGCTaGCTAGTGCAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: DSAVPTAPSGSAVLCAHPSRGSG*LVQSPG
Trigger: ACCTGGGCTCTGCACTAGCCAGCCTGAGCCCCTGCT...TGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCAGACTCTGTGCGGAATaGAGCAGGGGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TMFCSRARVAPGLQLGQARLCAE*SRGSGW
Trigger: CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCT...GGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGAGACTCTGTGCGGAATaGAGCAGGGGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: APPSECSHTGSALGTVHARLCAE*SRGSGW
Trigger: CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCT...CGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCACTCGATGCCACTCTTaGAAGAGATGCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: CSRARVAPGLQLGQADEPTRCHS*KRCPTM
Trigger: CATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGT...GGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CATGGCGCGGCCCTCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTGCCTCCAGCCGACATCACATaGTCCGGCTGTACTCGATGC +
Preference number: 4 (lower is better)
Translates to: HGAALLPAPSRRGMLLLPPADIT*SGCTRC
Trigger: GCATCGAGTACAGCCGGACCATGTGATGTCGGCTGG...AGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: GRGRAIPFIAPPCSEAPVKGGAW*RLPSRH
Trigger: ATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTT...CACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: AYLPRMGMLCACPRCSVPKGGAW*RLPSRH
Trigger: ATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTT...GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: PSPCSTGPAAGAGRRAQLTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...TAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LKSLPRMGMLCACPRCSVHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...AACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
CDS-3UTR CCA 90 bp TTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LGWFWKGTGHSLYCAPLFHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...GAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PRLLWAGSGRGRAIPFIAHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...CGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCCTTTGTGTCTGCTGTaGCGTACCTGCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: HRACSWGRPTSPVRWLAAPLCLL*RTCHGW
Trigger: CCATCCGTGGCAGGTACGCCACAGCAGACACAAAGG...AGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGGCAGGCTTCTTTGGGCTaGTTCTGGAAGGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: PVNAATLGQPWGRCMRRGQASLG*FWKGTG
Trigger: GCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTG...CCCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTTCCTCCCTCCAGGCTTCTTTGGGCTaGTTCTGGAAGGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: GGRTQVPEAPSAQGCSSLQASLG*FWKGTG
Trigger: GCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTG...GAGGGAGGAACAACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGGGAGAGGCCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCTCATCAGCCCCTCATaGAGGAGTGGGGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: WERPSEGRPLPVNAATLGLISPS*RSGGHS
Trigger: GGAGTGGCCCCCACTCCTCCATGAGGGGCTGATGAG...ACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGGCCTCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GAGCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTTGGAGCAGCAGCTTGTaGCAGCATGAGGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: EPQSSVLARKASPRLPTPWSSSL*QHEGGR
Trigger: CCGCCCTCCCTCATGCTGCCACAAGCTGCTGCTCCA...AGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCATGTGGCCAGGCCTTaGAGCAGCAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: HDVLFPSPCSTGPAAGAGHVARP*SSSLWQ
Trigger: CTGCCACAAGCTGCTGCTCCAAGGCCTGGCCACATG...GCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTGGTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATGTGGCCAGGCCTTaGAGCAGCAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VVDSAVPTAPSGSAVLCAHVARP*SSSLWQ
Trigger: CTGCCACAAGCTGCTGCTCCAAGGCCTGGCCACATG...GGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGGTGCATAAGGTGGTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTGGCTGGGCAGCTCTaGAGGCGGAAGGACACAGGT +
Preference number: 4 (lower is better)
Translates to: LVHKVVDSAVPTAPSGSAVAGQL*RRKDTG
Trigger: ACCTGTGTCCTTCCGCCTCCAGAGCTGCCCAGCCAC...GGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCACCTTATGCACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTCAGCATGGCGCGGCCCTCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCGTGTCTATGTCATCGTaGCAGAGGAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VSMARPSCQHRQGGGCCSVSMSS*QRRRRL
Trigger: CAGCCTGCGCCTCCTCTGCCACGATGACATAGACAC...GGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCATGCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTCATTCACACCTCGTaGGGGAGCCGGCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: CLLWRTCHGWACSAHAHDVIHTS*GSRRPL
Trigger: CAGCGGCCGCCGGCTCCCCCACGAGGTGTGAATGAC...ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414063.6
ENST00000421765.7
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
CDS-3UTR CCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGCCACACAGCTGGGCCTaGGTGCTCCAGGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLPHSWA*VLQEHE
Trigger: CTCATGCTCCTGGAGCACCCAGGCCCAGCTGTGTGG...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGTATGGGCCACACAGCTaGGCCTGGGTGCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TLQSPRPLPALPFSVPIQYGPHS*AWVLQE
Trigger: CTCCTGGAGCACCCAGGCCCAGCTGTGTGGCCCATA...CTGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCA +
Preference number: 4 (lower is better)
Translates to: HRACSWGRPTSPVRWLAALCRAS*TLSRRP
Trigger: TGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAG...AGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GGGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGCTGTGTTGTTGGTGGTaGGGACATGCAGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: GVRWTGRRALRAAEGWGLLCCWW*GHAGKW
Trigger: CCATTTACCTGCATGTCCTCACCACCAACAACACAG...CAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCAACCGTCCTGATGCGTaGCCGCCTGTGCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: APSSHTFVSAVAYLPRMGNRPDA*PPVPGG
Trigger: GCCCCCTGGCACAGGCGGTCACGCATCAGGACGGTT...GCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CTGGTGCATAAGGTGGTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCCTGCACGGAAGGTGCTaGGGAGTAGGAACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: LVHKVVDSAVPTAPSGSALHGRC*GVGTVL
Trigger: CAGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAG...GGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCACCTTATGCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCAGCTTGTGGCAGCATaGGGGAGGGCGGGGAGGACC +
Preference number: 4 (lower is better)
Translates to: VLEGDGPFPLLRPLVPRLQLVAA*GRAGRT
Trigger: GGTCCTCCCCGCCCTCCCTCATGCTGCCACAAGCTG...GAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp ACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCGACAGATGGCAGCCTTaGGGCCTAATGTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: TGPAAGAGRRAQLDGWQLDRWQP*GLMSSS
Trigger: TGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTC...GAGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTTATGCACCTGCGGCACTaGCAGCATCTCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ALEAEGHRSLRPRLPRVVMHLRH*QHLCPQ
Trigger: CTGAGGGCAGAGATGCTGTCAGTGCCGCAGGTGCAT...AACAACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTCTGCCATGGCTTTGTaGCACTGCAGCTATGCTGGG +
Preference number: 4 (lower is better)
Translates to: EGRPLPVNAATLGQPWGRSAMAL*HCSYAG
Trigger: CCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGA...CCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp AAGAGCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCAAGGACACAGGTCCCTaGGGCCCCGTCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: KSLCVCCGVPATDGHALRKDTGP*GPVCPG
Trigger: CCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTT...GCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360862.9
ENST00000414063.6
CDS-3UTR TCA 90 bp GCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCATCACATGATCGCCACTaGTTCGCAGTGGAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: AHDVLFPSPCSTGPAAGASHDRH*FAVERA
Trigger: CGCCCTCTCCACTGCGAATCAGTGGCGATCATGTGA...TGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGTCACATGATCGCCACTaGTTCGCAGTGGAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQSHDRH*FAVERA
Trigger: CGCCCTCTCCACTGCGAATCAGTGGCGATCATGTGA...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTGCAGGGTGGGGCCTCTaGGCCCGAGGACAAATGTCC +
Preference number: 4 (lower is better)
Translates to: LLWRTCHGWACSAHAHDVAGWGL*ARGQMS
Trigger: GGACATTTGTCCTCGGGCTCAGAGGCCCCACCCTGC...AACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CAGGGTGGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCGGCTGGACACTGCAGTaGTCAGGGGCAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: QGGAARTLCHGFVTLQLCGWTLQ*SGAGVG
Trigger: CCCCACACCTGCCCCTGATCACTGCAGTGTCCAGCC...GCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGGCAGGTAAATGGCTTTaGAGTGGTCCTGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: APPSECSHTGSALGTVHAAGKWL*SGPGRW
Trigger: CCACCGCCCAGGACCACTGCAAAGCCATTTACCTGC...CGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCAGGTAAATGGCTTTaGAGTGGTCCTGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQAGKWL*SGPGRW
Trigger: CCACCGCCCAGGACCACTGCAAAGCCATTTACCTGC...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCACTCTTGGAAGAGATaGCCGACCATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: FCSRARVAPGLQLGQADEHSWKR*PTMAGS
Trigger: GCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTG...CTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTATCCGGCTGTACTCGATaGCACTCTTGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: PSPCSTGPAAGAGRRAQLSGCTR*HSWKRC
Trigger: GCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGA...TAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: AHDVLFPSPCSTGPAAGAGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...TGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGCGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 4 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQRMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 4 (lower is better)
Translates to: ALRMPTMFCSRARVAPGLCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...CAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCATCAGCCCCTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: SSVLARKASPRLPTPHQPLLWRT*HGWACS
Trigger: AGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG...GGGCTGATGAGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGGCCCCTCCCAGTGAATaGAGCCACACTGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: CVCCGVPATDGHALRMPTAPPSE*SHTGSA
Trigger: GGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC...CGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCCCCTCCCAGTGAATaGAGCCACACTGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SAHAHDVLFPSPCSTGPAAPPSE*SHTGSA
Trigger: GGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC...TGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCATTCCCTTTATTaGGCCCCCTTGTTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: AHDVLFPSPCSTGPAAGAGHSLY*APLFRG
Trigger: GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCC...TGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCAGCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTTCAGAGCTCTGTGCTTaGGAGGAAAGCCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: AALEAEGHRSLRPRLPRVSELCA*EESLPQ
Trigger: CTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGA...AACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCCTTTCAGAGCTCTGTGCTTaGGAGGAAAGCCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GPAAGAGRRAQLDGWQLLSELCA*EESLPQ
Trigger: CTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGA...AAGGAGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGATGCGTGACCGCCTGTaGCAGGGGGCTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LWRTCHGWACSAHAHDVLMRDRL*QGAEPQ
Trigger: CTGAGGCTCAGCCCCCTGGCACAGGCGGTCACGCAT...CAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTGGTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCAGGGCACTGGTAACTaGACGGAAGGTGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VVDSAVPTAPSGSAVLCAQGTGN*TEGAEE
Trigger: CTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTG...GGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCCAGCTGAATGGAGCATaGCAAGGTCCGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TMFCSRARVAPGLQLGQAQLNGA*QGPTGS
Trigger: ACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTG...GGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGGCAGCTGAATGGAGCATaGCAAGGTCCGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PVNAATLGQPWGRCMRRGQLNGA*QGPTGS
Trigger: ACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTG...CCCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGAAGGAGTCTCGGCGATaGCTGTCCTCAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PSECSHTGSALGTVHAQGKESRR*LSSAGQ
Trigger: CTGACCTGCTGAGGACAGGCATCGCCGAGACTCCTT...CCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGCTTCCTCCTGTCTaGATGTGGCCAGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: APPSECSHTGSALGTVHAQLPPV*MWPGLG
Trigger: TCCAAGGCCTGGCCACATGCAGACAGGAGGAAGCTG...CGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCCACAGGACTGCCCCCTaGCCACAAGGCCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: WACSAHAHDVLFPSPCSTHRTAP*PQGQAL
Trigger: TAGGGCCTGGCCTTGTGGGCAGGGGGCAGTCCTGTG...GGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTGTGACACTGCAGCTATaGTGGGCGGGACTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LLWRTCHGWACSAHAHDVVTLQL*WAGLRP
Trigger: GGGGCGGAGTCCCGCCCAGCATAGCTGCAGTGTCAC...AACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACTGCACGGAAGTGACACTGCAGCTATaGTGGGCGGGACTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: CQGPTGSVTSQGTGNCTEVTLQL*WAGLRP
Trigger: GGGGCGGAGTCCCGCCCAGCATAGCTGCAGTGTCAC...TTCCGTGCAGTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGCCGCTAGGACCCTCTaGCATGGCTTTGTGACACTG +
Preference number: 4 (lower is better)
Translates to: TMFCSRARVAPGLQLGQAAARTL*HGFVTL
Trigger: CAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGC...GGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCTGTGCCCATCCAGGGCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATGAGGGGACCTGGGGCTaGCCCAGCACCCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: SVPIQGLPLLWLEAPSSHEGTWG*PSTLRA
Trigger: GGCTCTCAGGGTGCTGGGGCAGCCCCAGGTCCCCTC...ATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCTGGATGGGCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGGAGCTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTCGTCAAGGAGGGGGATaGTGCTCCTGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GELKSLPRMGMLCACPRCRQGGG*CSCLVP
Trigger: AGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACG...ACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAGCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407558.9
ENST00000575076.5
CDS-3UTR GCA 90 bp GCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGATGGCGCGGCCCTCCTaGCAGCACCGTCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: AGSGRGRAIPFIAPPCSEMARPS*QHRQGG
Trigger: CCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCAT...CTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCATGGCGCGGCCCTCCTaGCAGCACCGTCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VLEGDGPFPLLRPLVPRLMARPS*QHRQGG
Trigger: CCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCAT...GAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCATGGCGCGGCCCTCCTaGCAGCACCGTCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: WFWKGTGHSLYCAPLFRGMARPS*QHRQGG
Trigger: CCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCAT...GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGCACTGGGCTGGACACTaGAGTGATCAGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLHWAGH*SDQGQV
Trigger: CACCTGCCCCTGATCACTGCAGTGTCCAGCCCAGTG...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTTCACTGGGCTGGACACTaGAGTGATCAGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ALEAEGHRSLRPRLPRVVHWAGH*SDQGQV
Trigger: CACCTGCCCCTGATCACTGCAGTGTCCAGCCCAGTG...AACAACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCCATACCTTTGTGTCTaGTGTGGCGTACCTGCCACG +
Preference number: 4 (lower is better)
Translates to: GQAPPSECSHTGSALGTVPYLCV*CGVPAT
Trigger: CGTGGCAGGTACGCCACAGCAGACACAAAGGTATGG...CACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTCTGCCGTTCTCTGTaGCCATCCAGGGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LRMPTMFCSRARVAPGLQLCRSL*PSRAFH
Trigger: GTGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAG...CTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCACTCTGCCGTTCTCTGTaGCCATCCAGGGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: DSAVPTAPSGSAVLCAHPLCRSL*PSRAFH
Trigger: GTGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAG...TGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGGGCCTTCCAGGTGCACAGCCCAGTTaGCATGGAGCCTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SPRPLPALPFSVPIQGLPGAQPS*HGACCV
Trigger: AACACAGCAGGCTCCATGGCAACTGGGCTGTGCACC...TGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCCAGGCCATGGTGTCTaGCTGCAGCCACTAGGCGCC +
Preference number: 4 (lower is better)
Translates to: GVPATDGHALRMPTMFCSPGHGV*LQPLGA
Trigger: GGCGCCTAGTGGCTGCAGGCAGACACCATGGCCTGG...GGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CAGGGTGGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCCCAGGCCATGGTGTCTaGCTGCAGCCACTAGGCGCC +
Preference number: 4 (lower is better)
Translates to: QGGAARTLCHGFVTLQLCPGHGV*LQPLGA
Trigger: GGCGCCTAGTGGCTGCAGGCAGACACCATGGCCTGG...GCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCCACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGCCCACCCCACACCCTaGCTATGGGCCACACAGCTG +
Preference number: 4 (lower is better)
Translates to: AYLPRMGMLCACPRCSVPAHPTP*LWATQL
Trigger: CAGCTGTGTGGCCCATAGGCAGGGTGTGGGGTGGGC...GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCGGGCTCAGCGCATCCTaGAGGCGAAGGGAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: FWKGTGHSLYCAPLFRGSGLSAS*RRREPG
Trigger: TCCCGGCTCCCTTCGCCTCCAGGATGCGCTGAGCCC...GGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
CDS-3UTR CCA 90 bp GGCTGCCCAGCCGACATCACATGGTCCGGCTGTACTCGATGCCACTCTTGGAAGGGGCTCAGCGCATCCTaGAGGCGAAGGGAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: GCPADITWSGCTRCHSWKGLSAS*RRREPG
Trigger: TCCCGGCTCCCTTCGCCTCCAGGATGCGCTGAGCCC...CTTCCAAGAGTGGCATCGAGTACAGCCGGACCATGTGATGTCGGCTGGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR CCA 90 bp GCTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTGGGCTCAGCGCATCCTaGAGGCGAAGGGAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: AEEPATDGHALRMPTMFCGLSAS*RRREPG
Trigger: TCCCGGCTCCCTTCGCCTCCAGGATGCGCTGAGCCC...ACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575076.5
CDS-3UTR CCA 90 bp TTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCGGAGCCGGCGGCCGCTaGGGGTGTTGTAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LGWFWKGTGHSLYCAPLFGAGGR*GCCRAQ
Trigger: CTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCC...GAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
CDS-3UTR CCA 90 bp CATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCAGCAGGGGCTCAGGCTaGCTAGTGCAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: HALRMPTMFCSRARVAPGSRGSG*LVQSPG
Trigger: ACCTGGGCTCTGCACTAGCCAGCCTGAGCCCCTGCT...GCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGAGACTCTGTGCGGAATaGAGCAGGGGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TLQSPRPLPALPFSVPIQRLCAE*SRGSGW
Trigger: CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCT...CTGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGAGACTCTGTGCGGAATaGAGCAGGGGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLRLCAE*SRGSGW
Trigger: CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCT...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCAGCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTAGAGATGCCCGACCATaGCAGGAAGCTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: AALEAEGHRSLRPRLPRVRDARP*QEAAEQ
Trigger: CTGCTCTGCAGCTTCCTGCCATGGTCGGGCATCTCT...AACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGAGAGATGCCCGACCATaGCAGGAAGCTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PSECSHTGSALGTVHAQGRDARP*QEAAEQ
Trigger: CTGCTCTGCAGCTTCCTGCCATGGTCGGGCATCTCT...CCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGAGAGATGCCCGACCATaGCAGGAAGCTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQRDARP*QEAAEQ
Trigger: CTGCTCTGCAGCTTCCTGCCATGGTCGGGCATCTCT...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACCCAGCCGACATCACATaGTCCGGCTGTACTCGATGC +
Preference number: 4 (lower is better)
Translates to: MFCSRARVAPGLQLGQADPADIT*SGCTRC
Trigger: GCATCGAGTACAGCCGGACCATGTGATGTCGGCTGG...GTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: RAIPFIAPPCSEAPVPLRKGGAW*RLPSRH
Trigger: ATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTT...CCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: QMSMAEPSRRLVPYPVGQPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...CTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCCCTACAAGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: GPTRQMAALRPNVELSFLPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...GAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCTTGTAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: TKLPYLCVCCGVPATDGHPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...ATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGCCCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: QNRPGRVAAVDVEDIGEAPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...GGCTTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR CCA 90 bp GGACAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GQMSMAEPSRRLVPYPVGHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...CCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCC +
Preference number: 4 (lower is better)
Translates to: LPRMGMLCACPRCSVPEPRTCHG*ACSAHA
Trigger: GGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG...GGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCC +
Preference number: 4 (lower is better)
Translates to: CHGWACSAHAHDVLFPSPRTCHG*ACSAHA
Trigger: GGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG...CGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCC +
Preference number: 4 (lower is better)
Translates to: CVCCGVPATDGHALRMPTRTCHG*ACSAHA
Trigger: GGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG...CGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCC +
Preference number: 4 (lower is better)
Translates to: PRMGMLCACPRCSVPEPVRTCHG*ACSAHA
Trigger: GGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG...CACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTGGTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCCTTTGTGTCTGCTGTaGCGTACCTGCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: VVDSAVPTAPSGSAVLCAPLCLL*RTCHGW
Trigger: CCATCCGTGGCAGGTACGCCACAGCAGACACAAAGG...GGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGCCTTTGTGTCTGCTGTaGCGTACCTGCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQPLCLL*RTCHGW
Trigger: CCATCCGTGGCAGGTACGCCACAGCAGACACAAAGG...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CAGGGTGGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: QGGAARTLCHGFVTLQLCTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...GCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCCACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: EPATDGHALRMPTMFCSRTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...TCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
CDS-3UTR CCA 90 bp CGATGCCTGTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCGAACAGGCAGCGGAGTaGGAGAGGCCCAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: RCLSSAGQLNGACQGPTGEQAAE*ERPSEG
Trigger: GCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTC...GCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGGAACAGGCAGCGGAGTaGGAGAGGCCCAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GRGRAIPFIAPPCSEAPVEQAAE*ERPSEG
Trigger: GCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTC...CACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGGAACAGGCAGCGGAGTaGGAGAGGCCCAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LWRTCHGWACSAHAHDVLEQAAE*ERPSEG
Trigger: GCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTC...CAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCCCCTCATGGAGGAGTaGGGGCCACTCCTCACCCCC +
Preference number: 4 (lower is better)
Translates to: GFFGLVLEGDGPFPLLRPPLMEE*GPLLTP
Trigger: GGGGGTGAGGAGTGGCCCCCACTCCTCCATGAGGGG...GGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCC
64% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGAGGGCACTCATCAGCCCCTCATaGAGGAGTGGGGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: PGRSCKNRQRSGRGPVRALISPS*RSGGHS
Trigger: GGAGTGGCCCCCACTCCTCCATGAGGGGCTGATGAG...TGCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACTGCTGGAGCAGCAGCTTGTaGCAGCATGAGGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: GACQGPTGSVTSQGTGNCWSSSL*QHEGGR
Trigger: CCGCCCTCCCTCATGCTGCCACAAGCTGCTGCTCCA...GCAGTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCATGTGGCCAGGCCTTaGAGCAGCAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: MPTMFCSRARVAPGLQLGHVARP*SSSLWQ
Trigger: CTGCCACAAGCTGCTGCTCCAAGGCCTGGCCACATG...CCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCCTCCTGTCTGCATGTaGCCAGGCCTTGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: MPTMFCSRARVAPGLQLGPPVCM*PGLGAA
Trigger: TGCTGCTCCAAGGCCTGGCCACATGCAGACAGGAGG...CCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACTGCGTGGCTGGGCAGCTCTaGAGGCGGAAGGACACAGGT +
Preference number: 4 (lower is better)
Translates to: GACQGPTGSVTSQGTGNCVAGQL*RRKDTG
Trigger: ACCTGTGTCCTTCCGCCTCCAGAGCTGCCCAGCCAC...GCAGTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGGCTGAGCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCTCTCCCAACTCAGGCTaGCTCCGCACTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GAEPQSSVLARKASPRLPSPNSG*LRTSFL
Trigger: GAGGAAGGAAGTGCGGAGCCAGCCTGAGTTGGGAGA...GGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGCTCAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGTGTCTATGTCATCGTaGCAGAGGAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MFCSRARVAPGLQLGQADVSMSS*QRRRRL
Trigger: CAGCCTGCGCCTCCTCTGCCACGATGACATAGACAC...GTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGGTGTCTATGTCATCGTaGCAGAGGAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: APPSECSHTGSALGTVHAVSMSS*QRRRRL
Trigger: CAGCCTGCGCCTCCTCTGCCACGATGACATAGACAC...CGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGTCATTCACACCTCGTaGGGGAGCCGGCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: KSLPRMGMLCACPRCSVPVIHTS*GSRRPL
Trigger: CAGCGGCCGCCGGCTCCCCCACGAGGTGTGAATGAC...GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570819.5
ENST00000575076.5
CDS-3UTR TCA 90 bp CCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGGCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCA +
Preference number: 4 (lower is better)
Translates to: PVNAATLGQPWGRCMRRGLCRAS*TLSRRP
Trigger: TGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAG...CCCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp AGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCA +
Preference number: 4 (lower is better)
Translates to: SPCSTGPAAGAGRRAQLDLCRAS*TLSRRP
Trigger: TGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAG...ATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GTGGTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCA +
Preference number: 4 (lower is better)
Translates to: VVDSAVPTAPSGSAVLCALCRAS*TLSRRP
Trigger: TGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAG...GGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTACTGTGTTGTTGGTGGTaGGGACATGCAGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: PSPCSTGPAAGAGRRAQLLCCWW*GHAGKW
Trigger: CCATTTACCTGCATGTCCTCACCACCAACAACACAG...TAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TGGGAGAGGCCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTAGCAGGGAGGGGAGCTaGAGAGCCTTTGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: WERPSEGRPLPVNAATLGSREGS*RAFVSA
Trigger: AGCAGACACAAAGGCTCTTCAGCTCCCCTCCCTGCT...ACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGGCCTCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572942.5
CDS-3UTR TCA 90 bp CCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCAGCTTGTGGCAGCATaGGGGAGGGCGGGGAGGACC +
Preference number: 4 (lower is better)
Translates to: PRLLWAGSGRGRAIPFIAQLVAA*GRAGRT
Trigger: GGTCCTCCCCGCCCTCCCTCATGCTGCCACAAGCTG...CGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGGACAGATGGCAGCCTTaGGGCCTAATGTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: APPSECSHTGSALGTVHADRWQP*GLMSSS
Trigger: TGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTC...CGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp ATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGACAGATGGCAGCCTTaGGGCCTAATGTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: MFCSRARVAPGLQLGQADDRWQP*GLMSSS
Trigger: TGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTC...GTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCATGCACCTGCGGCACTaGCAGCATCTCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LPRMGMLCACPRCSVPEPMHLRH*QHLCPQ
Trigger: CTGAGGGCAGAGATGCTGTCAGTGCCGCAGGTGCAT...GGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGGATGCTAGAAGTATGTaGTGCACCTGCGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: FCSRARVAPGLQLGQADEDARSM*CTCGTD
Trigger: GTCAGTGCCGCAGGTGCATCACATACTTCTAGCATC...CTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp ACAGAAGGGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGTCTGCCATGGCTTTGTaGCACTGCAGCTATGCTGGG +
Preference number: 4 (lower is better)
Translates to: TEGVRWTGRRALRAAEGWSAMAL*HCSYAG
Trigger: CCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGA...CCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCCCTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGGTCTGCCATGGCTTTGTaGCACTGCAGCTATGCTGGG +
Preference number: 4 (lower is better)
Translates to: PVNAATLGQPWGRCMRRGSAMAL*HCSYAG
Trigger: CCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGA...CCCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp AGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCATCAGCCCTCACATGATCGCCACTaGTTCGCAGTGGAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: SSVLARKASPRLPTPHQPSHDRH*FAVERA
Trigger: CGCCCTCTCCACTGCGAATCAGTGGCGATCATGTGA...GGGCTGATGAGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GGACCCAAGGAGTCTCGGCGATGCCTGTCCTCAGCAGGTCAGCTGAATGGAGCAGCAGGGTGGGGCCTCTaGGCCCGAGGACAAATGTCC +
Preference number: 4 (lower is better)
Translates to: GPKESRRCLSSAGQLNGAAGWGL*ARGQMS
Trigger: GGACATTTGTCCTCGGGCTCAGAGGCCCCACCCTGC...TGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCGCCGAGACTCCTTGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCAGGGTGGGGCCTCTaGGCCCGAGGACAAATGTCC +
Preference number: 4 (lower is better)
Translates to: AGSGRGRAIPFIAPPCSEAGWGL*ARGQMS
Trigger: GGACATTTGTCCTCGGGCTCAGAGGCCCCACCCTGC...CTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCGGCTGGACACTGCAGTaGTCAGGGGCAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: FWKGTGHSLYCAPLFRGSGWTLQ*SGAGVG
Trigger: CCCCACACCTGCCCCTGATCACTGCAGTGTCCAGCC...GGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAAGGGAACCTATGCCGTaGTTCCTGAACTCTTTCACG +
Preference number: 4 (lower is better)
Translates to: PSPCSTGPAAGAGRRAQLREPMP*FLNSFT
Trigger: CGTGAAAGAGTTCAGGAAGCACGGCATAGGTTCCCT...TAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTTGCAGGTAAATGGCTTTaGAGTGGTCCTGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: ALEAEGHRSLRPRLPRVVAGKWL*SGPGRW
Trigger: CCACCGCCCAGGACCACTGCAAAGCCATTTACCTGC...AACAACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGCAGGTAAATGGCTTTaGAGTGGTCCTGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLAGKWL*SGPGRW
Trigger: CCACCGCCCAGGACCACTGCAAAGCCATTTACCTGC...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGAACCATGGCAGGAAGCTaGAGAGCAGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VSAVAYLPRMGMLCACPRTMAGS*RAGCGP
Trigger: AGGCCCACAGCCTGCTCTGCAGCTTCCTGCCATGGT...TCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGGGGAGCTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGACCATGGCAGGAAGCTaGAGAGCAGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RGAEEPATDGHALRMPTMTMAGS*RAGCGP
Trigger: AGGCCCACAGCCTGCTCTGCAGCTTCCTGCCATGGT...CATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAGCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
CDS-3UTR GCA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGCACTCTTGGAAGAGATaGCCGACCATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQHSWKR*PTMAGS
Trigger: GCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTG...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCACTCTTGGAAGAGATaGCCGACCATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HDVLFPSPCSTGPAAGAGHSWKR*PTMAGS
Trigger: GCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTG...GCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCCACTCTTGGAAGAGATaGCCGACCATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TMFCSRARVAPGLQLGQAHSWKR*PTMAGS
Trigger: GCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTG...GGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTGGGCCTGGTGGCGGCTaGCCAGCCGACATCACATGG +
Preference number: 4 (lower is better)
Translates to: LKSLPRMGMLCACPRCSVGPGGG*PADITW
Trigger: CCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCC...AACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
CDS-3UTR GCA 90 bp CTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LRMPTMFCSRARVAPGLQGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...CTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTGCCTGGTGCCTGCCTTCGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: SCQHRQGGGCCSCLVPAFGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...GAAGGCAGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTCGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 4 (lower is better)
Translates to: AHAHDVLFPSPCSTGPAARMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...AGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCACGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 4 (lower is better)
Translates to: ASELCACEESLPQAAHPSRMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...TGAGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATCGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 4 (lower is better)
Translates to: QAPPSECSHTGSALGTVHRMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...ATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCAGTCAGCTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 4 (lower is better)
Translates to: WCGPPASTVRSAEVQAVSCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...GCTGACTGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGCTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: CVCCGVPATDGHALRMPTLLWRT*HGWACS
Trigger: AGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG...CGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCAAGAGCCTTTGTGTCTaGTGTGGCGTACCTGCCACG +
Preference number: 4 (lower is better)
Translates to: TMFCSRARVAPGLQLGQAKSLCV*CGVPAT
Trigger: CGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTT...GGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
CDS-3UTR GCA 90 bp GGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGTTTCCAGGAAGGAGCTaGAAGAACAGGCAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: GQAPPSECSHTGSALGTVFPGRS*KNRQRS
Trigger: ACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAA...CACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCTTTCCAGGAAGGAGCTaGAAGAACAGGCAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: GRPLPVNAATLGQPWGRCFPGRS*KNRQRS
Trigger: ACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAA...GCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGGGCCATTCCCTTTATTaGGCCCCCTTGTTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: ALRMPTMFCSRARVAPGLGHSLY*APLFRG
Trigger: GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCC...CAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACATGCGTGACCGCCTGTaGCAGGGGGCTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: VLSRSAEWSMPRSDGQCDMRDRL*QGAEPQ
Trigger: CTGAGGCTCAGCCCCCTGGCACAGGCGGTCACGCAT...GTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCATGCGTGACCGCCTGTaGCAGGGGGCTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: WFWKGTGHSLYCAPLFRGMRDRL*QGAEPQ
Trigger: CTGAGGCTCAGCCCCCTGGCACAGGCGGTCACGCAT...GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCCACAGGACTGCCCCCTaGCCACAAGGCCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: WFWKGTGHSLYCAPLFRGHRTAP*PQGQAL
Trigger: TAGGGCCTGGCCTTGTGGGCAGGGGGCAGTCCTGTG...GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGGCCGCTAGGACCCTCTaGCATGGCTTTGTGACACTG +
Preference number: 4 (lower is better)
Translates to: ALRMPTMFCSRARVAPGLAARTL*HGFVTL
Trigger: CAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGC...CAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACGAGGGGACCTGGGGCTaGCCCAGCACCCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PPLQEKVPSSFPGRSCKNEGTWG*PSTLRA
Trigger: GGCTCTCAGGGTGCTGGGGCAGCCCCAGGTCCCCTC...GTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGCGTCAAGGAGGGGGATaGTGCTCCTGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LWRTCHGWACSAHAHDVLRQGGG*CSCLVP
Trigger: AGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACG...CAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCCGTCAAGGAGGGGGATaGTGCTCCTGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: WACSAHAHDVLFPSPCSTRQGGG*CSCLVP
Trigger: AGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACG...GGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCATGGCGCGGCCCTCCTaGCAGCACCGTCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LGWFWKGTGHSLYCAPLFMARPS*QHRQGG
Trigger: CCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCAT...GAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGCTCTGCCGTTCTCTGTaGCCATCCAGGGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CVCCGVPATDGHALRMPTLCRSL*PSRAFH
Trigger: GTGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAG...CGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGTCTGGGCTGTGCTGGTaGATAAGGTGGTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQSGLCW*IRWWTL
Trigger: CAGAGTCCACCACCTTATGCACCAGCACAGCCCAGA...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCAGGTGCACAGCCCAGTTaGCATGGAGCCTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: ASELCACEESLPQAAHPSGAQPS*HGACCV
Trigger: AACACAGCAGGCTCCATGGCAACTGGGCTGTGCACC...TGAGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCTGTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTCCAGGCCATGGTGTCTaGCTGCAGCCACTAGGCGCC +
Preference number: 4 (lower is better)
Translates to: PVLSRSAEWSMPRSDGQCPGHGV*LQPLGA
Trigger: GGCGCCTAGTGGCTGCAGGCAGACACCATGGCCTGG...ACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCGGGCTCAGCGCATCCTaGAGGCGAAGGGAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: CVPPLQEKVPSSFPGRSCGLSAS*RRREPG
Trigger: TCCCGGCTCCCTTCGCCTCCAGGATGCGCTGAGCCC...GCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
CDS-3UTR CCA 90 bp GGCTGGCTAGTGCAGAGCCCAGGTGCTGGATGTAGTCCAAAATCGTCCAGGGAGGGGCTCAGCGCATCCTaGAGGCGAAGGGAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: GWLVQSPGAGCSPKSSREGLSAS*RRREPG
Trigger: TCCCGGCTCCCTTCGCCTCCAGGATGCGCTGAGCCC...CTCCCTGGACGATTTTGGACTACATCCAGCACCTGGGCTCTGCACTAGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR CCA 90 bp CAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGCCGGAGCCGGCGGCCGCTaGGGGTGTTGTAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QNRPGRVAAVDVEDIGEAGAGGR*GCCRAQ
Trigger: CTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCC...GGCTTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR CCA 90 bp CGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGCCATCTTTGGAGCCGGCGGCCGCTaGGGGTGTTGTAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RPGRVAAVDVEDIGEAIFGAGGR*GCCRAQ
Trigger: CTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCC...AAAGATGGCTTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR CCA 90 bp GGGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGCTATCATTCCCACAATaGCACCTCTGTAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GVRWTGRRALRAAEGWGLLSFPQ*HLCRLQ
Trigger: CTGCAACCTACAGAGGTGCCATTGTGGGAATGATAG...CAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCAGTGGTCCTGGGCGGTaGTTGATATGTGATCCTTTA +
Preference number: 4 (lower is better)
Translates to: LFPSPCSTGPAAGAGRRASGPGR*LICDPL
Trigger: TAAAGGATCACATATCAACCACCGCCCAGGACCACT...GGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCAGGGGCTCAGGCTaGCTAGTGCAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RTCHGWACSAHAHDVLFPSRGSG*LVQSPG
Trigger: ACCTGGGCTCTGCACTAGCCAGCCTGAGCCCCTGCT...CGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTAGCAGGGGCTCAGGCTaGCTAGTGCAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QLNGACQGPTGSVTSQGTSRGSG*LVQSPG
Trigger: ACCTGGGCTCTGCACTAGCCAGCCTGAGCCCCTGCT...AGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCAGACTCTGTGCGGAATaGAGCAGGGGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPRMGMLCACPRCSVPEPRLCAE*SRGSGW
Trigger: CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCT...GGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGAGAGATGCCCGACCATaGCAGGAAGCTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLRDARP*QEAAEQ
Trigger: CTGCTCTGCAGCTTCCTGCCATGGTCGGGCATCTCT...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTTAGAGATGCCCGACCATaGCAGGAAGCTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ALEAEGHRSLRPRLPRVVRDARP*QEAAEQ
Trigger: CTGCTCTGCAGCTTCCTGCCATGGTCGGGCATCTCT...AACAACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTACTCGATGCCACTCTTaGAAGAGATGCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: HRACSWGRPTSPVRWLAATRCHS*KRCPTM
Trigger: CATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGT...AGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGACTCGATGCCACTCTTaGAAGAGATGCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: GQAPPSECSHTGSALGTVTRCHS*KRCPTM
Trigger: CATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGT...CACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCCAGCCGACATCACATaGTCCGGCTGTACTCGATGC +
Preference number: 4 (lower is better)
Translates to: MPTMFCSRARVAPGLQLGPADIT*SGCTRC
Trigger: GCATCGAGTACAGCCGGACCATGTGATGTCGGCTGG...CCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCCAGCCGACATCACATaGTCCGGCTGTACTCGATGC +
Preference number: 4 (lower is better)
Translates to: LRMPTMFCSRARVAPGLQPADIT*SGCTRC
Trigger: GCATCGAGTACAGCCGGACCATGTGATGTCGGCTGG...CTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCAGAGCAGGCTGTGGGCCTGGCGGTAGACTCTGTGCGGAATGGAGCAGGGGCTCCAGCCGACATCACATaGTCCGGCTGTACTCGATGC +
Preference number: 4 (lower is better)
Translates to: AEQAVGLAVDSVRNGAGAPADIT*SGCTRC
Trigger: GCATCGAGTACAGCCGGACCATGTGATGTCGGCTGG...AGCCCCTGCTCCATTCCGCACAGAGTCTACCGCCAGGCCCACAGCCTGCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR CCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGCCAGCCGACATCACATaGTCCGGCTGTACTCGATGC +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLPADIT*SGCTRC
Trigger: GCATCGAGTACAGCCGGACCATGTGATGTCGGCTGG...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: PSSHTFVSAVAYLPRMGMKGGAW*RLPSRH
Trigger: ATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTT...CATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: SSLAGESPLQLSRKELQEPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...TTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: HSLYCAPLFRGSCAFTVKPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...CTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: EGRPLPVNAATLGQPWGRAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...CCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGGGCCTGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: AVPTAPSGSAVLCAHPGPAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...AGGCCCTGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAACACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PFPLLRPLVPRLLCLYGQHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...TTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCC +
Preference number: 4 (lower is better)
Translates to: LLWRTCHGWACSAHAHDVRTCHG*ACSAHA
Trigger: GGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG...AACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCATCAGCCCCCTTTGTGTCTGCTGTaGCGTACCTGCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: SSVLARKASPRLPTPHQPPLCLL*RTCHGW
Trigger: CCATCCGTGGCAGGTACGCCACAGCAGACACAAAGG...GGGCTGATGAGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: VLEGDGPFPLLRPLVPRLTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...GAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: ASLGWFWKGTGHSLYCAPTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...GGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCGAACAGGCAGCGGAGTaGGAGAGGCCCAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: VLEGDGPFPLLRPLVPRLEQAAE*ERPSEG
Trigger: GCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTC...GAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGAACAGGCAGCGGAGTaGGAGAGGCCCAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: VPATDGHALRMPTMFCSREQAAE*ERPSEG
Trigger: GCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTC...TCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGGAACAGGCAGCGGAGTaGGAGAGGCCCAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: RAIPFIAPPCSEAPVPLREQAAE*ERPSEG
Trigger: GCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTC...CCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCGAACAGGCAGCGGAGTaGGAGAGGCCCAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: FWKGTGHSLYCAPLFRGSEQAAE*ERPSEG
Trigger: GCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTC...GGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGTCTTTGGGCTGGTTCTaGAAGGGGACGGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: MPTMFCSRARVAPGLQLGSLGWF*KGTGHS
Trigger: GGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGA...CCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCTGGGCGCAGGCTTCTTTGGGCTaGTTCTGGAAGGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: GAARTLCHGFVTLQLCWAQASLG*FWKGTG
Trigger: GCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTG...CGCCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACTGCACGGAACTCATCAGCCCCTCATaGAGGAGTGGGGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: CQGPTGSVTSQGTGNCTELISPS*RSGGHS
Trigger: GGAGTGGCCCCCACTCCTCCATGAGGGGCTGATGAG...TTCCGTGCAGTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGCTCATCAGCCCCTCATaGAGGAGTGGGGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: RACHGWACSAHAHDVLFPLISPS*RSGGHS
Trigger: GGAGTGGCCCCCACTCCTCCATGAGGGGCTGATGAG...CGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407558.9
ENST00000575076.5
CDS-3UTR CCA 90 bp GCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCCTCATCAGCCCCTCATaGAGGAGTGGGGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: AYLPRMGMLCACPRCSVPLISPS*RSGGHS
Trigger: GGAGTGGCCCCCACTCCTCCATGAGGGGCTGATGAG...GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGAGCAGGTCAGCTGAATaGAGCATGCCAAGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQSRSAE*SMPRSD
Trigger: GTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCT...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGTGGAGCAGCAGCTTGTaGCAGCATGAGGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: GRGRAIPFIAPPCSEAPVWSSSL*QHEGGR
Trigger: CCGCCCTCCCTCATGCTGCCACAAGCTGCTGCTCCA...CACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CAGCATGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCAGCATGTGGCCAGGCCTTaGAGCAGCAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QHGAALPPALSGQQRFKQHVARP*SSSLWQ
Trigger: CTGCCACAAGCTGCTGCTCCAAGGCCTGGCCACATG...CTGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCATGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CAGCATGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCAGCCTCCTGTCTGCATGTaGCCAGGCCTTGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QHGAALPPALSGQQRFKQPPVCM*PGLGAA
Trigger: TGCTGCTCCAAGGCCTGGCCACATGCAGACAGGAGG...CTGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCATGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CAGGGTGGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCGTGGCTGGGCAGCTCTaGAGGCGGAAGGACACAGGT +
Preference number: 4 (lower is better)
Translates to: QGGAARTLCHGFVTLQLCVAGQL*RRKDTG
Trigger: ACCTGTGTCCTTCCGCCTCCAGAGCTGCCCAGCCAC...GCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCCACCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGCTTTCCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGCTGAGAGCCCGTGGCTaGGCAGCTCTGGAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: SFPGRSCKNRQRSGRGPVLRARG*AALEAE
Trigger: TTCCGCCTCCAGAGCTGCCCAGCCACGGGCTCTCAG...CACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCCTGAGAGCCCGTGGCTaGGCAGCTCTGGAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: WAGSGRGRAIPFIAPPCSLRARG*AALEAE
Trigger: TTCCGCCTCCAGAGCTGCCCAGCCACGGGCTCTCAG...GGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGACTGAGAGCCCGTGGCTaGGCAGCTCTGGAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: VPATDGHALRMPTMFCSRLRARG*AALEAE
Trigger: TTCCGCCTCCAGAGCTGCCCAGCCACGGGCTCTCAG...TCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCATTCTGAGGGCCCCTaGCCCCAGCTGAGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: LRMPTMFCSRARVAPGLQHSEGP*PQLSSR
Trigger: TCTTGAACTCAGCTGGGGCCAGGGGCCCTCAGAATG...CTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GAGCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCATTCTGAGGGCCCCTaGCCCCAGCTGAGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: EPQSSVLARKASPRLPTPHSEGP*PQLSSR
Trigger: TCTTGAACTCAGCTGGGGCCAGGGGCCCTCAGAATG...AGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGCATTCTGAGGGCCCCTaGCCCCAGCTGAGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: PPSECSHTGSALGTVHAQHSEGP*PQLSSR
Trigger: TCTTGAACTCAGCTGGGGCCAGGGGCCCTCAGAATG...CTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGTGTCTATGTCATCGTaGCAGAGGAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLVSMSS*QRRRRL
Trigger: CAGCCTGCGCCTCCTCTGCCACGATGACATAGACAC...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GAGCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTGTGTCTATGTCATCGTaGCAGAGGAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EPQSSVLARKASPRLPTPVSMSS*QRRRRL
Trigger: CAGCCTGCGCCTCCTCTGCCACGATGACATAGACAC...AGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCATCAGCCCGTGTCTATGTCATCGTaGCAGAGGAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSVLARKASPRLPTPHQPVSMSS*QRRRRL
Trigger: CAGCCTGCGCCTCCTCTGCCACGATGACATAGACAC...GGGCTGATGAGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGAGTCTGGGTACTCGATaGGGAACCAGTCGCCACACA +
Preference number: 4 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQSLGTR*GTSRHT
Trigger: TGTGTGGCGACTGGTTCCCCATCGAGTACCCAGACT...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCAGCATGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCACCACACAGCTGGGCCTaGGTGCTCCAGGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: SAWCGPPASTVRSAEVQAPHSWA*VLQEHE
Trigger: CTCATGCTCCTGGAGCACCCAGGCCCAGCTGTGTGG...TGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCATGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCA +
Preference number: 4 (lower is better)
Translates to: QAPPSECSHTGSALGTVHLCRAS*TLSRRP
Trigger: TGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAG...ATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCCTGTGTTGTTGGTGGTaGGGACATGCAGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: GRPLPVNAATLGQPWGRCLCCWW*GHAGKW
Trigger: CCATTTACCTGCATGTCCTCACCACCAACAACACAG...GCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAAGCAGGGAGGGGAGCTaGAGAGCCTTTGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SAHAHDVLFPSPCSTGPASREGS*RAFVSA
Trigger: AGCAGACACAAAGGCTCTTCAGCTCCCCTCCCTGCT...TGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
CDS-3UTR TCA 90 bp TTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCGTCCGACGGGCAGTGTaGCCTCCCAGGGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: LGWFWKGTGHSLYCAPLFVRRAV*PPRALV
Trigger: TACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGAC...GAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCAGTCCGACGGGCAGTGTaGCCTCCCAGGGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: WLEAPSSHTFVSAVAYLPVRRAV*PPRALV
Trigger: TACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGAC...TGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAGCTTGTGGCAGCATaGGGGAGGGCGGGGAGGACC +
Preference number: 4 (lower is better)
Translates to: LRSSLAGESPLQLSRKELQLVAA*GRAGRT
Trigger: GGTCCTCCCCGCCCTCCCTCATGCTGCCACAAGCTG...CAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGCAGCTTGTGGCAGCATaGGGGAGGGCGGGGAGGACC +
Preference number: 4 (lower is better)
Translates to: VPPLQEKVPSSFPGRSCKQLVAA*GRAGRT
Trigger: GGTCCTCCCCGCCCTCCCTCATGCTGCCACAAGCTG...CTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCATGCACCTGCGGCACTaGCAGCATCTCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: WACSAHAHDVLFPSPCSTMHLRH*QHLCPQ
Trigger: CTGAGGGCAGAGATGCTGTCAGTGCCGCAGGTGCAT...GGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAATGCACCTGCGGCACTaGCAGCATCTCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: EPATDGHALRMPTMFCSRMHLRH*QHLCPQ
Trigger: CTGAGGGCAGAGATGCTGTCAGTGCCGCAGGTGCAT...TCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407558.9
ENST00000575076.5
CDS-3UTR TCA 90 bp CTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGTCTGCCATGGCTTTGTaGCACTGCAGCTATGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRMPTMFCSRARVAPGLQSAMAL*HCSYAG
Trigger: CCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGA...CTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCGATATCACGATACCATaGGTCTGGGTACTCGATGGG +
Preference number: 4 (lower is better)
Translates to: GRPLPVNAATLGQPWGRCDITIP*VWVLDG
Trigger: CCCATCGAGTACCCAGACTCATGGTATCGTGATATC...GCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGGATATCACGATACCATaGGTCTGGGTACTCGATGGG +
Preference number: 4 (lower is better)
Translates to: EGRPLPVNAATLGQPWGRDITIP*VWVLDG
Trigger: CCCATCGAGTACCCAGACTCATGGTATCGTGATATC...CCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TCAGCATGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCAAGCAGGGAGGGGAGCTaGAGAGCCTGTGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: SAWCGPPASTVRSAEVQASREGS*RACGKE
Trigger: CTCTTTCCCACAGGCTCTTCAGCTCCCCTCCCTGCT...TGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCATGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGAGGGCAGCAGGTAAATGGCTTTaGAGTGGTCCTGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PGRSCKNRQRSGRGPVRAAGKWL*SGPGRW
Trigger: CCACCGCCCAGGACCACTGCAAAGCCATTTACCTGC...TGCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGACCATGGCAGGAAGCTaGAGAGCAGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GRGRAIPFIAPPCSEAPVTMAGS*RAGCGP
Trigger: AGGCCCACAGCCTGCTCTGCAGCTTCCTGCCATGGT...CACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCACCATGGCAGGAAGCTaGAGAGCAGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GVPATDGHALRMPTMFCSTMAGS*RAGCGP
Trigger: AGGCCCACAGCCTGCTCTGCAGCTTCCTGCCATGGT...GGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTACCATGGCAGGAAGCTaGAGAGCAGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SAVAYLPRMGMLCACPRCTMAGS*RAGCGP
Trigger: AGGCCCACAGCCTGCTCTGCAGCTTCCTGCCATGGT...ACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTCACTCTTGGAAGAGATaGCCGACCATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: AHAHDVLFPSPCSTGPAAHSWKR*PTMAGS
Trigger: GCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTG...AGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCACACTCTTGGAAGAGATaGCCGACCATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: DSAVPTAPSGSAVLCAHPHSWKR*PTMAGS
Trigger: GCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTG...TGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGTCCGGCTGTACTCGATaGCACTCTTGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: PSECSHTGSALGTVHAQGSGCTR*HSWKRC
Trigger: GCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGA...CCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACAGAAGGGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGTCCGGCTGTACTCGATaGCACTCTTGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: TEGVRWTGRRALRAAEGWSGCTR*HSWKRC
Trigger: GCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGA...CCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCCCTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCGGGCCTGGTGGCGGCTaGCCAGCCGACATCACATGG +
Preference number: 4 (lower is better)
Translates to: GPSTFVAGGTKLPYLCVCGPGGG*PADITW
Trigger: CCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCC...GCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGGAGCTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GELKSLPRMGMLCACPRCGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...ACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
CDS-3UTR GCA 90 bp CATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 4 (lower is better)
Translates to: HALRMPTMFCSRARVAPGRMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...GCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGCGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 4 (lower is better)
Translates to: PRMGMLCACPRCSVPEPVRMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...CACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 4 (lower is better)
Translates to: QLNGACQGPTGSVTSQGTCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...AGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 4 (lower is better)
Translates to: RTCHGWACSAHAHDVLFPCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...CGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGAGGCCATTCCCTTTATTaGGCCCCCTTGTTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: VSAVAYLPRMGMLCACPRGHSLY*APLFRG
Trigger: GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCC...TCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGATGCGTGACCGCCTGTaGCAGGGGGCTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PRLLWAGSGRGRAIPFIAMRDRL*QGAEPQ
Trigger: CTGAGGCTCAGCCCCCTGGCACAGGCGGTCACGCAT...CGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGCAGCTGAATGGAGCATaGCAAGGTCCGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: CHGWACSAHAHDVLFPSPQLNGA*QGPTGS
Trigger: ACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTG...CGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CAGCATGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCAGCAGCTTCCTCCTGTCTaGATGTGGCCAGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: QHGAALPPALSGQQRFKQQLPPV*MWPGLG
Trigger: TCCAAGGCCTGGCCACATGCAGACAGGAGGAAGCTG...CTGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCATGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCTGGGCGGCCGCTAGGACCCTCTaGCATGGCTTTGTGACACTG +
Preference number: 4 (lower is better)
Translates to: GAARTLCHGFVTLQLCWAAARTL*HGFVTL
Trigger: CAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGC...CGCCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCCTCCTGCCTGGTGCCTaGCTTCATTCTGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VAGGTKLPYLCVCCGVPALLPGA*LHSEGP
Trigger: GGGGCCCTCAGAATGAAGGCAGGCACCAGGCAGGAG...GGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACCGTCAAGGAGGGGGATaGTGCTCCTGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: NGACQGPTGSVTSQGTGNRQGGG*CSCLVP
Trigger: AGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACG...GTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGGCTGGACACTaGAGTGATCAGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RSAEWSMPRSDGQCDLPGHWAGH*SDQGQV
Trigger: CACCTGCCCCTGATCACTGCAGTGTCCAGCCCAGTG...CCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCACCATACCTTTGTGTCTaGTGTGGCGTACCTGCCACG +
Preference number: 4 (lower is better)
Translates to: DSAVPTAPSGSAVLCAHPPYLCV*CGVPAT
Trigger: CGTGGCAGGTACGCCACAGCAGACACAAAGGTATGG...TGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCTCTGCCGTTCTCTGTaGCCATCCAGGGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GRGRAIPFIAPPCSEAPVLCRSL*PSRAFH
Trigger: GTGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAG...CACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATTCTGGGCTGTGCTGGTaGATAAGGTGGTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: VDSAVPTAPSGSAVLCAHSGLCW*IRWWTL
Trigger: CAGAGTCCACCACCTTATGCACCAGCACAGCCCAGA...ATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGTCTGGGCTGTGCTGGTaGATAAGGTGGTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: PPSECSHTGSALGTVHAQSGLCW*IRWWTL
Trigger: CAGAGTCCACCACCTTATGCACCAGCACAGCCCAGA...CTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGCAAACCTCTGGGCTGTaGTGGTGCATAAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TLQSPRPLPALPFSVPIQQTSGL*WCIRWW
Trigger: CCACCACCTTATGCACCAGCACAGCCCAGAGGTTTG...CTGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCACCAGGCCATGGTGTCTaGCTGCAGCCACTAGGCGCC +
Preference number: 4 (lower is better)
Translates to: HQAPIPLCLLWRTCHGWAPGHGV*LQPLGA
Trigger: GGCGCCTAGTGGCTGCAGGCAGACACCATGGCCTGG...TGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCAAAGGGAGCCGGGAAGTaGGACCGCGCGGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LLRPLVPRLLCLYGQVCPKGAGK*DRAEPA
Trigger: TGCGGGCTCCGCGCGGTCCCACTTCCCGGCTCCCTT...TGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
CDS-3UTR CCA 90 bp GATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGAGGACATGCAGGTAAATaGCTTTGCAGTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: DVLFPSPCSTGPAAGAGRGHAGK*LCSGPG
Trigger: CCCAGGACCACTGCAAAGCCATTTACCTGCATGTCC...TCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCAAGCAGGGGCTCAGGCTaGCTAGTGCAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: FVSAVAYLPRMGMLCACPSRGSG*LVQSPG
Trigger: ACCTGGGCTCTGCACTAGCCAGCCTGAGCCCCTGCT...TGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCAGACTCTGTGCGGAATaGAGCAGGGGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LCVCCGVPATDGHALRMPRLCAE*SRGSGW
Trigger: CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCT...GGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCAGAGATGCCCGACCATaGCAGGAAGCTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: HALRMPTMFCSRARVAPGRDARP*QEAAEQ
Trigger: CTGCTCTGCAGCTTCCTGCCATGGTCGGGCATCTCT...GCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCACTCGATGCCACTCTTaGAAGAGATGCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: HDVLFPSPCSTGPAAGAGTRCHS*KRCPTM
Trigger: CATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGT...GCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCACCAGCCGACATCACATaGTCCGGCTGTACTCGATGC +
Preference number: 4 (lower is better)
Translates to: SAHAHDVLFPSPCSTGPAPADIT*SGCTRC
Trigger: GCATCGAGTACAGCCGGACCATGTGATGTCGGCTGG...TGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGCCATCTTTGAGGACAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: GRVAAVDVEDIGEAIFEDKGGAW*RLPSRH
Trigger: ATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTT...GTCCTCAAAGATGGCTTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR CCA 90 bp GCTGTGTTAGCTTGGCACAAGTCACCAAACCTCTGGGCTGTGCTGGTGCATAAGCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: AVLAWHKSPNLWAVLVHKPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...CTTATGCACCAGCACAGCCCAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: PPSECSHTGSALGTVHAQTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...CTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCC +
Preference number: 4 (lower is better)
Translates to: RAIPFIAPPCSEAPVPLRRTCHG*ACSAHA
Trigger: GGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG...CCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCAGGCTTCTTTGGGCTaGTTCTGGAAGGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: AFVSAVAYLPRMGMLCACQASLG*FWKGTG
Trigger: GCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTG...GCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572942.5
CDS-3UTR CCA 90 bp GTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGCCCCTCATGGAGGAGTaGGGGCCACTCCTCACCCCC +
Preference number: 4 (lower is better)
Translates to: VPPLQEKVPSSFPGRSCKPLMEE*GPLLTP
Trigger: GGGGGTGAGGAGTGGCCCCCACTCCTCCATGAGGGG...CTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCCTCATCAGCCCCTCATaGAGGAGTGGGGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: WAGSGRGRAIPFIAPPCSLISPS*RSGGHS
Trigger: GGAGTGGCCCCCACTCCTCCATGAGGGGCTGATGAG...GGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGAAGCAGGTCAGCTGAATaGAGCATGCCAAGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: SEGRPLPVNAATLGQPWGSRSAE*SMPRSD
Trigger: GTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCT...TCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGGAGCAGCAGCTTGTaGCAGCATGAGGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: FWKGTGHSLYCAPLFRGSWSSSL*QHEGGR
Trigger: CCGCCCTCCCTCATGCTGCCACAAGCTGCTGCTCCA...GGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCTGGAGCAGCAGCTTGTaGCAGCATGAGGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: WAGSGRGRAIPFIAPPCSWSSSL*QHEGGR
Trigger: CCGCCCTCCCTCATGCTGCCACAAGCTGCTGCTCCA...GGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCTGGAGCAGCAGCTTGTaGCAGCATGAGGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: WRTCHGWACSAHAHDVLFWSSSL*QHEGGR
Trigger: CCGCCCTCCCTCATGCTGCCACAAGCTGCTGCTCCA...GAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCCATGTGGCCAGGCCTTaGAGCAGCAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WACSAHAHDVLFPSPCSTHVARP*SSSLWQ
Trigger: CTGCCACAAGCTGCTGCTCCAAGGCCTGGCCACATG...GGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCTCCTGTCTGCATGTaGCCAGGCCTTGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AFVSAVAYLPRMGMLCACPPVCM*PGLGAA
Trigger: TGCTGCTCCAAGGCCTGGCCACATGCAGACAGGAGG...GCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360862.9
ENST00000414063.6
CDS-3UTR CCA 90 bp CCTCCCAGGGCACTGGTAACTGCACGGAAGGTGCTGAGGAGTAGGAACCGTCCTGTGGCTGGGCAGCTCTaGAGGCGGAAGGACACAGGT +
Preference number: 4 (lower is better)
Translates to: PPRALVTARKVLRSRNRPVAGQL*RRKDTG
Trigger: ACCTGTGTCCTTCCGCCTCCAGAGCTGCCCAGCCAC...AGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGGTTCAAGAGGGGACCTaGGGCTGCCCCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: PRLLWAGSGRGRAIPFIAVQEGT*GCPSTL
Trigger: CAGGGTGCTGGGGCAGCCCCAGGTCCCCTCTTGAAC...CGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGAGTCTGGGTACTCGATaGGGAACCAGTCGCCACACA +
Preference number: 4 (lower is better)
Translates to: MPTMFCSRARVAPGLQLGSLGTR*GTSRHT
Trigger: TGTGTGGCGACTGGTTCCCCATCGAGTACCCAGACT...CCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGAAGTCTGGGTACTCGATaGGGAACCAGTCGCCACACA +
Preference number: 4 (lower is better)
Translates to: SEGRPLPVNAATLGQPWGSLGTR*GTSRHT
Trigger: TGTGTGGCGACTGGTTCCCCATCGAGTACCCAGACT...TCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp AGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATCTGTGTTGTTGGTGGTaGGGACATGCAGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: SPCSTGPAAGAGRRAQLDLCCWW*GHAGKW
Trigger: CCATTTACCTGCATGTCCTCACCACCAACAACACAG...ATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGACAGATGGCAGCCTTaGGGCCTAATGTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LPRMGMLCACPRCSVPEPDRWQP*GLMSSS
Trigger: TGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTC...GGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCTGGGCGGACAGATGGCAGCCTTaGGGCCTAATGTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GAARTLCHGFVTLQLCWADRWQP*GLMSSS
Trigger: TGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTC...CGCCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp AAGAGCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCACCTGCGGCACTaGCAGCATCTCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KSLCVCCGVPATDGHALRMHLRH*QHLCPQ
Trigger: CTGAGGGCAGAGATGCTGTCAGTGCCGCAGGTGCAT...GCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360862.9
ENST00000414063.6
CDS-3UTR TCA 90 bp GACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGATGCTAGAAGTATGTaGTGCACCTGCGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: DSAVPTAPSGSAVLCAHPDARSM*CTCGTD
Trigger: GTCAGTGCCGCAGGTGCATCACATACTTCTAGCATC...TGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CAGGGTGGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCTCACATGATCGCCACTaGTTCGCAGTGGAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: QGGAARTLCHGFVTLQLCSHDRH*FAVERA
Trigger: CGCCCTCTCCACTGCGAATCAGTGGCGATCATGTGA...GCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCCACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGGATATCACGATACCATaGGTCTGGGTACTCGATGGG +
Preference number: 4 (lower is better)
Translates to: PSECSHTGSALGTVHAQGDITIP*VWVLDG
Trigger: CCCATCGAGTACCCAGACTCATGGTATCGTGATATC...CCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCAGGGAACCTATGCCGTaGTTCCTGAACTCTTTCACG +
Preference number: 4 (lower is better)
Translates to: TMFCSRARVAPGLQLGQAREPMP*FLNSFT
Trigger: CGTGAAAGAGTTCAGGAAGCACGGCATAGGTTCCCT...GGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGGAGGGAACCTATGCCGTaGTTCCTGAACTCTTTCACG +
Preference number: 4 (lower is better)
Translates to: PVNAATLGQPWGRCMRRGREPMP*FLNSFT
Trigger: CGTGAAAGAGTTCAGGAAGCACGGCATAGGTTCCCT...CCCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGACCATGGCAGGAAGCTaGAGAGCAGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SLCVCCGVPATDGHALRMTMAGS*RAGCGP
Trigger: AGGCCCACAGCCTGCTCTGCAGCTTCCTGCCATGGT...CATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
CDS-3UTR GCA 90 bp GCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCACCATGGCAGGAAGCTaGAGAGCAGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: APSSHTFVSAVAYLPRMGTMAGS*RAGCGP
Trigger: AGGCCCACAGCCTGCTCTGCAGCTTCCTGCCATGGT...GCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGTCCGGCTGTACTCGATaGCACTCTTGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: ALRMPTMFCSRARVAPGLSGCTR*HSWKRC
Trigger: GCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGA...CAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATTCCGGCTGTACTCGATaGCACTCTTGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: QAPPSECSHTGSALGTVHSGCTR*HSWKRC
Trigger: GCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGA...ATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ATCACATGGTCCGGCTGTACTCGATGCCACTCTTGGAAGAGATGCCCGACCATGGGGCCTGGTGGCGGCTaGCCAGCCGACATCACATGG +
Preference number: 4 (lower is better)
Translates to: ITWSGCTRCHSWKRCPTMGPGGG*PADITW
Trigger: CCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCC...CATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGACCATGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR GCA 90 bp CGCCTCTCGGTCCCCACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCAGGGCCTGGTGGCGGCTaGCCAGCCGACATCACATGG +
Preference number: 4 (lower is better)
Translates to: RLSVPTQIKALMDPKSGAGPGGG*PADITW
Trigger: CCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCC...TGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGTGGGGACCGAGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GRGRAIPFIAPPCSEAPVGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...CACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: RTCHGWACSAHAHDVLFPGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...CGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: AYLPRMGMLCACPRCSVPGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCCGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 4 (lower is better)
Translates to: WACSAHAHDVLFPSPCSTRMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...GGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTTTCCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGAGTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 4 (lower is better)
Translates to: LSRKELQEQAAEWERPSECHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...CTCACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: VLEGDGPFPLLRPLVPRLLLWRT*HGWACS
Trigger: AGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG...GAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCAAGAGCCTTTGTGTCTaGTGTGGCGTACCTGCCACG +
Preference number: 4 (lower is better)
Translates to: HALRMPTMFCSRARVAPGKSLCV*CGVPAT
Trigger: CGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTT...GCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
CDS-3UTR GCA 90 bp CCCCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGGCCCCTCCCAGTGAATaGAGCCACACTGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PPGFFGLVLEGDGPFPLLAPPSE*SHTGSA
Trigger: GGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC...CAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTGGTGCATAAGGTGGTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCTTTCCAGGAAGGAGCTaGAAGAACAGGCAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: LVHKVVDSAVPTAPSGSAFPGRS*KNRQRS
Trigger: ACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAA...GGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCACCTTATGCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTTTTCCAGGAAGGAGCTaGAAGAACAGGCAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: AHAHDVLFPSPCSTGPAAFPGRS*KNRQRS
Trigger: ACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAA...AGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGTTCCGAGGCTCCTGTaGCTTTACGGTCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLVPRLL*LYGQVC
Trigger: ACACACTTGACCGTAAAGGCACAGGAGCCTCGGAAC...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGTTCCGAGGCTCCTGTaGCTTTACGGTCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: DSAVPTAPSGSAVLCAHPVPRLL*LYGQVC
Trigger: ACACACTTGACCGTAAAGGCACAGGAGCCTCGGAAC...TGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCAGGGCACTGGTAACTaGACGGAAGGTGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: RSAEWSMPRSDGQCDLPGQGTGN*TEGAEE
Trigger: CTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTG...CCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGCAGGGCACTGGTAACTaGACGGAAGGTGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LWRTCHGWACSAHAHDVLQGTGN*TEGAEE
Trigger: CTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTG...CAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGCAGGGCACTGGTAACTaGACGGAAGGTGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: RACHGWACSAHAHDVLFPQGTGN*TEGAEE
Trigger: CTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTG...CGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407558.9
ENST00000575076.5
CDS-3UTR GCA 90 bp TCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTCAGCTGAATGGAGCATaGCAAGGTCCGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SAVAYLPRMGMLCACPRCQLNGA*QGPTGS
Trigger: ACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTG...ACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCCAGCTTCCTCCTGTCTaGATGTGGCCAGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: AYLPRMGMLCACPRCSVPQLPPV*MWPGLG
Trigger: TCCAAGGCCTGGCCACATGCAGACAGGAGGAAGCTG...GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGTGACACTGCAGCTATaGTGGGCGGGACTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LAFLPCRRKSPPAFQEGAVTLQL*WAGLRP
Trigger: GGGGCGGAGTCCCGCCCAGCATAGCTGCAGTGTCAC...AGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCGTGACACTGCAGCTATaGTGGGCGGGACTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: GPSTFVAGGTKLPYLCVCVTLQL*WAGLRP
Trigger: GGGGCGGAGTCCCGCCCAGCATAGCTGCAGTGTCAC...GCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACAAGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCTGTCTGAGGGGACCTGGGGCTaGCCCAGCACCCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: TRQMAALRPNVELSFLLSEGTWG*PSTLRA
Trigger: GGCTCTCAGGGTGCTGGGGCAGCCCCAGGTCCCCTC...AGACAGGAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCCACTGGGCTGGACACTaGAGTGATCAGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FWKGTGHSLYCAPLFRGSHWAGH*SDQGQV
Trigger: CACCTGCCCCTGATCACTGCAGTGTCCAGCCCAGTG...GGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCACTGGGCTGGACACTaGAGTGATCAGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VLSRSAEWSMPRSDGQCDHWAGH*SDQGQV
Trigger: CACCTGCCCCTGATCACTGCAGTGTCCAGCCCAGTG...GTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGCTTTCCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGCACTGGGCTGGACACTaGAGTGATCAGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SFPGRSCKNRQRSGRGPVHWAGH*SDQGQV
Trigger: CACCTGCCCCTGATCACTGCAGTGTCCAGCCCAGTG...CACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGCAGTCGCCACACAGGTaGTTCACAGTGTCTATGTCA +
Preference number: 4 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQQSPHR*FTVSMS
Trigger: TGACATAGACACTGTGAAGCACCTGTGTGGCGACTG...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCATCTGGGCTGTGCTGGTaGATAAGGTGGTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: SAHAHDVLFPSPCSTGPASGLCW*IRWWTL
Trigger: CAGAGTCCACCACCTTATGCACCAGCACAGCCCAGA...TGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAACCAGGCCATGGTGTCTaGCTGCAGCCACTAGGCGCC +
Preference number: 4 (lower is better)
Translates to: RSSLAGESPLQLSRKELQPGHGV*LQPLGA
Trigger: GGCGCCTAGTGGCTGCAGGCAGACACCATGGCCTGG...TTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGGGCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCCGGCGGAGACACTCTaGCCACCCCACACCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RAFHFCGWRHQAPIPLCLPAETL*PPHTLP
Trigger: AGGCAGGGTGTGGGGTGGGCAGAGTGTCTCCGCCGG...CAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTTGCCATGGAGCCTGCTGTGTTAGCTTGGCACAAGTCACCAAACCTCTGGGCTCCGGCGGAGACACTCTaGCCACCCCACACCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VAMEPAVLAWHKSPNLWAPAETL*PPHTLP
Trigger: AGGCAGGGTGTGGGGTGGGCAGAGTGTCTCCGCCGG...AGCCCAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGCTCCATGGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CGCCTCTCGGTCCCCACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACCGGCGGAGACACTCTaGCCACCCCACACCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RLSVPTQIKALMDPKSGAPAETL*PPHTLP
Trigger: AGGCAGGGTGTGGGGTGGGCAGAGTGTCTCCGCCGG...TGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGTGGGGACCGAGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGGTAGACTCTATGCCGTaGTTCCTGAACTCTTTCACG +
Preference number: 4 (lower is better)
Translates to: EGRPLPVNAATLGQPWGRVDSMP*FLNSFT
Trigger: CGTGAAAGAGTTCAGGAAGCACGGCATAGAGTCTAC...CCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570819.5
ENST00000572942.5
CDS-3UTR CCA 90 bp CATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGGGGCTCAGCGCATCCTaGAGGCGAAGGGAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: HSLYCAPLFRGSCAFTVKGLSAS*RRREPG
Trigger: TCCCGGCTCCCTTCGCCTCCAGGATGCGCTGAGCCC...CTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
CDS-3UTR CCA 90 bp CACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCTATCATTCCCACAATaGCACCTCTGTAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: HRACSWGRPTSPVRWLAALSFPQ*HLCRLQ
Trigger: CTGCAACCTACAGAGGTGCCATTGTGGGAATGATAG...AGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGACATGCAGGTAAATaGCTTTGCAGTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLGHAGK*LCSGPG
Trigger: CCCAGGACCACTGCAAAGCCATTTACCTGCATGTCC...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGGGACATGCAGGTAAATaGCTTTGCAGTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: MPTMFCSRARVAPGLQLGGHAGK*LCSGPG
Trigger: CCCAGGACCACTGCAAAGCCATTTACCTGCATGTCC...CCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCAT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGCCCAGCCGACATCACATGGTCCGGCTGTACTCGATGCCACTCTTGGAAGAGAGCAGGGGCTCAGGCTaGCTAGTGCAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPSRHHMVRLYSMPLLEESRGSG*LVQSPG
Trigger: ACCTGGGCTCTGCACTAGCCAGCCTGAGCCCCTGCT...CTCTTCCAAGAGTGGCATCGAGTACAGCCGGACCATGTGATGTCGGCTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR CCA 90 bp GGGGAGCTGAAGAGCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATAGACTCTGTGCGGAATaGAGCAGGGGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GELKSLCVCCGVPATDGHRLCAE*SRGSGW
Trigger: CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCT...ATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTTCAGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
CDS-3UTR CCA 90 bp TTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCAAGACTCTGTGCGGAATaGAGCAGGGGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FVSAVAYLPRMGMLCACPRLCAE*SRGSGW
Trigger: CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCT...TGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGGGAGAGGCCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTACTCGATGCCACTCTTaGAAGAGATGCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: WERPSEGRPLPVNAATLGTRCHS*KRCPTM
Trigger: CATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGT...ACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGGCCTCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTCATCAGCCCACTCGATGCCACTCTTaGAAGAGATGCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: SSVLARKASPRLPTPHQPTRCHS*KRCPTM
Trigger: CATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGT...GGGCTGATGAGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGCCAGCCGACATCACATaGTCCGGCTGTACTCGATGC +
Preference number: 4 (lower is better)
Translates to: RACHGWACSAHAHDVLFPPADIT*SGCTRC
Trigger: GCATCGAGTACAGCCGGACCATGTGATGTCGGCTGG...CGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
CDS-3UTR CCA 90 bp CTCGGTCCCCACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACAT +
Preference number: 4 (lower is better)
Translates to: LGPHTNKGTDGSKVGCTAKGGAW*RLPSRH
Trigger: ATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTT...GGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGTGGGGACCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGCCGAAGGGTGGGGCCTaGTGGCGGCTGCCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: SIILAFLPCRRKSPPAFQPKGGA*WRLPSR
Trigger: TCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGG...CTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: MPTMFCSRARVAPGLQLGAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...CCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGGTGCATAAGGTGGTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: LVHKVVDSAVPTAPSGSAAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...GGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCACCTTATGCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CAGCATGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCAGACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: QHGAALPPALSGQQRFKQTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...CTGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGGAGCTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: GELKSLPRMGMLCACPRCTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...ACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
CDS-3UTR CCA 90 bp GCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGCCACCGGGCCTGCAGCTaGGGCAGGCCGACGAGCCCA +
Preference number: 4 (lower is better)
Translates to: APVPLRSSVSIILAFLPCHRACS*GRPTSP
Trigger: TGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG...GCAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCC +
Preference number: 4 (lower is better)
Translates to: PSSHTFVSAVAYLPRMGMRTCHG*ACSAHA
Trigger: GGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG...CATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCCCTACAAGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GPTRQMAALRPNVELSFLTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...GAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCTTGTAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CAGGGTGGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCTCTTTGGGCTGGTTCTaGAAGGGGACGGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: QGGAARTLCHGFVTLQLCSLGWF*KGTGHS
Trigger: GGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGA...GCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCCAGGCTTCTTTGGGCTaGTTCTGGAAGGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: APSSHTFVSAVAYLPRMGQASLG*FWKGTG
Trigger: GCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTG...GCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGCCCCTCATGGAGGAGTaGGGGCCACTCCTCACCCCC +
Preference number: 4 (lower is better)
Translates to: FPLLRPLVPRLLCLYGQVPLMEE*GPLLTP
Trigger: GGGGGTGAGGAGTGGCCCCCACTCCTCCATGAGGGG...CACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGCCCCTCATGGAGGAGTaGGGGCCACTCCTCACCCCC +
Preference number: 4 (lower is better)
Translates to: HSLYCAPLFRGSCAFTVKPLMEE*GPLLTP
Trigger: GGGGGTGAGGAGTGGCCCCCACTCCTCCATGAGGGG...CTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCACTCATCAGCCCCTCATaGAGGAGTGGGGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: HQAPIPLCLLWRTCHGWALISPS*RSGGHS
Trigger: GGAGTGGCCCCCACTCCTCCATGAGGGGCTGATGAG...TGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCAGTCAGCAGCAGGTCAGCTGAATaGAGCATGCCAAGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: WCGPPASTVRSAEVQAVSSRSAE*SMPRSD
Trigger: GTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCT...GCTGACTGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCTGTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTCCTCCTGTCTGCATGTaGCCAGGCCTTGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PVLSRSAEWSMPRSDGQCPPVCM*PGLGAA
Trigger: TGCTGCTCCAAGGCCTGGCCACATGCAGACAGGAGG...ACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCCATTCTGAGGGCCCCTaGCCCCAGCTGAGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: LCVCCGVPATDGHALRMPHSEGP*PQLSSR
Trigger: TCTTGAACTCAGCTGGGGCCAGGGGCCCTCAGAATG...GGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTCAGCATGGCGCGGCCCTCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTCGTCCCTTACCCTGTaGGGCAGAAATAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: VSMARPSCQHRQGGGCCSSSLTL*GRNRNH
Trigger: GTGATTTCTATTTCTGCCCCACAGGGTAAGGGACGA...GGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCATGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATAACATTACGTCCCCCTaGGGTCACCCTAAGACTCTA +
Preference number: 4 (lower is better)
Translates to: SPCSTGPAAGAGRRAQLDNITSP*GHPKTL
Trigger: TAGAGTCTTAGGGTGACCCCAGGGGGACGTAATGTT...ATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000572169.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGTCTCCCAACTCAGGCTaGCTCCGCACTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GRGRAIPFIAPPCSEAPVSPNSG*LRTSFL
Trigger: GAGGAAGGAAGTGCGGAGCCAGCCTGAGTTGGGAGA...CACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000572169.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTGTCTATGTCATCGTaGCAGAGGAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CLLWRTCHGWACSAHAHDVSMSS*QRRRRL
Trigger: CAGCCTGCGCCTCCTCTGCCACGATGACATAGACAC...ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTCCAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGTCATTCACACCTCGTaGGGGAGCCGGCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: VQNRPGRVAAVDVEDIGEVIHTS*GSRRPL
Trigger: CAGCGGCCGCCGGCTCCCCCACGAGGTGTGAATGAC...TTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR CCA 90 bp GGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCGCTGGATGTAGTCCGTaGGGCTCTATGCCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GVPATDGHALRMPTMFCSAGCSP*GSMPCF
Trigger: GAAGCACGGCATAGAGCCCCACGGACTACATCCAGC...GGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421765.7
3UTR CAA 72 bp GGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATaGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: GLVLEGDGPFPL*RPLVPRLLCLY
Trigger: GTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGAGATATCACGATACCATaGGTCTGGGTACCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: VSAVAYLPRMGMLCACPRDITIP*VWVPRG
Trigger: CCCACGAGGTACCCAGACTCATGGTATCGTGATATC...TCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360862.9
ENST00000577013.6
CDS-3UTR TCA 90 bp TGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCA +
Preference number: 4 (lower is better)
Translates to: WACSAHAHDVLFPSPCSTLCRAS*TLSRRP
Trigger: TGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAG...GGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp AGCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGAGCAGGGAGGGGAGCTaGAGAGCCTTTGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLCVCCGVPATDGHALRMSREGS*RAFVSA
Trigger: AGCAGACACAAAGGCTCTTCAGCTCCCCTCCCTGCT...CATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
CDS-3UTR TCA 90 bp TGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACTGCACGGAAGGTGCTaGGGAGTAGGAACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: WLEAPSSHTFVSAVAYLPLHGRC*GVGTVL
Trigger: CAGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAG...TGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCTGCACGGAAGGTGCTaGGGAGTAGGAACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: LGWFWKGTGHSLYCAPLFLHGRC*GVGTVL
Trigger: CAGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAG...GAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CGATGCCTGTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCGACAGATGGCAGCCTTaGGGCCTAATGTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RCLSSAGQLNGACQGPTGDRWQP*GLMSSS
Trigger: TGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTC...GCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCTCCCAGGGCACTGGTAACTGCACGGAAGGTGCTGAGGAGTAGGAACCGTCCTTCACATGATCGCCACTaGTTCGCAGTGGAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: PPRALVTARKVLRSRNRPSHDRH*FAVERA
Trigger: CGCCCTCTCCACTGCGAATCAGTGGCGATCATGTGA...AGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp AATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACTCACATGATCGCCACTaGTTCGCAGTGGAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: NGACQGPTGSVTSQGTGNSHDRH*FAVERA
Trigger: CGCCCTCTCCACTGCGAATCAGTGGCGATCATGTGA...GTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGGGCTGGACACTGCAGTaGTCAGGGGCAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: FPLLRPLVPRLLCLYGQVGWTLQ*SGAGVG
Trigger: CCCCACACCTGCCCCTGATCACTGCAGTGTCCAGCC...CACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp ATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGGATATCACGATACCATaGGTCTGGGTACTCGATGGG +
Preference number: 4 (lower is better)
Translates to: MPTMFCSRARVAPGLQLGDITIP*VWVLDG
Trigger: CCCATCGAGTACCCAGACTCATGGTATCGTGATATC...CCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACAAGCAGGGAGGGGAGCTaGAGAGCCTGCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: LPCRRKSPPAFQEGAARTSREGS*RACHGW
Trigger: CCATCCGTGGCAGGCTCTTCAGCTCCCCTCCCTGCT...TGTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407558.9
ENST00000575076.5
CDS-3UTR GCA 90 bp CCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGACCATGGCAGGAAGCTaGAGAGCAGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PRLLWAGSGRGRAIPFIATMAGS*RAGCGP
Trigger: AGGCCCACAGCCTGCTCTGCAGCTTCCTGCCATGGT...CGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCCACTCTTGGAAGAGATaGCCGACCATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: WACSAHAHDVLFPSPCSTHSWKR*PTMAGS
Trigger: GCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTG...GGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCCACTCTTGGAAGAGATaGCCGACCATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: KGTGHSLYCAPLFRGSCAHSWKR*PTMAGS
Trigger: GCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTG...GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCTCCGGCTGTACTCGATaGCACTCTTGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: HALRMPTMFCSRARVAPGSGCTR*HSWKRC
Trigger: GCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGA...GCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTGGGCCTGGTGGCGGCTaGCCAGCCGACATCACATGG +
Preference number: 4 (lower is better)
Translates to: APLFRGSCAFTVKCVHNTGPGGG*PADITW
Trigger: CCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCC...AGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GFFGLVLEGDGPFPLLRPGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...GGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: ASLGWFWKGTGHSLYCAPGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...GGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCAGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: FVSAVAYLPRMGMLCACPGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...TGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCCGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 4 (lower is better)
Translates to: WFWKGTGHSLYCAPLFRGRMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCACTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: HQAPIPLCLLWRTCHGWALLWRT*HGWACS
Trigger: AGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG...TGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCCTTTGTGTCCATAATACTTaGGTTCCTCCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GPAAGAGRRAQLDGWQLLCVHNT*VPPLQE
Trigger: CTCCTGCAAGGGAGGAACGCAAGTATTATGGACACA...AAGGAGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCATGTGTCCATAATACTTaGGTTCCTCCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: AHDVLFPSPCSTGPAAGACVHNT*VPPLQE
Trigger: CTCCTGCAAGGGAGGAACGCAAGTATTATGGACACA...TGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGTGTGTCCATAATACTTaGGTTCCTCCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSECSHTGSALGTVHAQGCVHNT*VPPLQE
Trigger: CTCCTGCAAGGGAGGAACGCAAGTATTATGGACACA...CCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCTGTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGGCCATTCCCTTTATTaGGCCCCCTTGTTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PVLSRSAEWSMPRSDGQCGHSLY*APLFRG
Trigger: GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCC...ACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGCTTTCCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGTCAGAGCTCTGTGCTTaGGAGGAAAGCCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SFPGRSCKNRQRSGRGPVSELCA*EESLPQ
Trigger: CTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGA...CACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCTCAGAGCTCTGTGCTTaGGAGGAAAGCCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: EEPATDGHALRMPTMFCSSELCA*EESLPQ
Trigger: CTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGA...GGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407558.9
ENST00000575076.5
CDS-3UTR GCA 90 bp CCTCCCAGGGCACTGGTAACTGCACGGAAGGTGCTGAGGAGTAGGAACCGTCCTTCAGAGCTCTGTGCTTaGGAGGAAAGCCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PPRALVTARKVLRSRNRPSELCA*EESLPQ
Trigger: CTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGA...AGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGACCCAAGGAGTCTCGGCGATGCCTGTCCTCAGCAGGTCAGCTGAATGGAGCATCAGAGCTCTGTGCTTaGGAGGAAAGCCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GPKESRRCLSSAGQLNGASELCA*EESLPQ
Trigger: CTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGA...TGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCGCCGAGACTCCTTGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCCAGGGCACTGGTAACTaGACGGAAGGTGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ASLGWFWKGTGHSLYCAPQGTGN*TEGAEE
Trigger: CTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTG...GGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCGCCGCTAGGACCCTCTaGCATGGCTTTGTGACACTG +
Preference number: 4 (lower is better)
Translates to: ASLGWFWKGTGHSLYCAPAARTL*HGFVTL
Trigger: CAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGC...GGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCGCCGCTAGGACCCTCTaGCATGGCTTTGTGACACTG +
Preference number: 4 (lower is better)
Translates to: VLEGDGPFPLLRPLVPRLAARTL*HGFVTL
Trigger: CAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGC...GAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCTCCCAGGGCACTGGTAACTGCACGGAAGGTGCTGAGGAGTAGGAACCGTCCTGCCGCTAGGACCCTCTaGCATGGCTTTGTGACACTG +
Preference number: 4 (lower is better)
Translates to: PPRALVTARKVLRSRNRPAARTL*HGFVTL
Trigger: CAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGC...AGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGCAGTCGCCACACAGGTaGTTCACAGTGTCTATGTCA +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLQSPHR*FTVSMS
Trigger: TGACATAGACACTGTGAAGCACCTGTGTGGCGACTG...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGGAGAGGCCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGTCGCCACACAGGTaGTTCACAGTGTCTATGTCA +
Preference number: 4 (lower is better)
Translates to: WERPSEGRPLPVNAATLGQSPHR*FTVSMS
Trigger: TGACATAGACACTGTGAAGCACCTGTGTGGCGACTG...ACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGGCCTCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATCAGTCGCCACACAGGTaGTTCACAGTGTCTATGTCA +
Preference number: 4 (lower is better)
Translates to: QAPPSECSHTGSALGTVHQSPHR*FTVSMS
Trigger: TGACATAGACACTGTGAAGCACCTGTGTGGCGACTG...ATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACAGTCGCCACACAGGTaGTTCACAGTGTCTATGTCA +
Preference number: 4 (lower is better)
Translates to: SEGRPLPVNAATLGQPWGQSPHR*FTVSMS
Trigger: TGACATAGACACTGTGAAGCACCTGTGTGGCGACTG...TCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGCCATACCTTTGTGTCTaGTGTGGCGTACCTGCCACG +
Preference number: 4 (lower is better)
Translates to: LWRTCHGWACSAHAHDVLPYLCV*CGVPAT
Trigger: CGTGGCAGGTACGCCACAGCAGACACAAAGGTATGG...CAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGTCTGCCTGCAGCCACTAGGCGCCTCTCGGTCCCCACACAAATAAAGGCACTGCTCTGCCGTTCTCTGTaGCCATCCAGGGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CLPAATRRLSVPTQIKALLCRSL*PSRAFH
Trigger: GTGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAG...CAGTGCCTTTATTTGTGTGGGGACCGAGAGGCGCCTAGTGGCTGCAGGCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCCAAACCTCTGGGCTGTaGTGGTGCATAAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LCVCCGVPATDGHALRMPQTSGL*WCIRWW
Trigger: CCACCACCTTATGCACCAGCACAGCCCAGAGGTTTG...GGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGGAGCCGGCGGCCGCTaGGGGTGTTGTAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SIILAFLPCRRKSPPAFQGAGGR*GCCRAQ
Trigger: CTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCC...CTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
CDS-3UTR CCA 90 bp CCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGCTATCATTCCCACAATaGCACCTCTGTAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: PSEGRPLPVNAATLGQPWLSFPQ*HLCRLQ
Trigger: CTGCAACCTACAGAGGTGCCATTGTGGGAATGATAG...CCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGGCTATCATTCCCACAATaGCACCTCTGTAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: PVNAATLGQPWGRCMRRGLSFPQ*HLCRLQ
Trigger: CTGCAACCTACAGAGGTGCCATTGTGGGAATGATAG...CCCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCAGTGGTCCTGGGCGGTaGTTGATATGTGATCCTTTA +
Preference number: 4 (lower is better)
Translates to: HDVLFPSPCSTGPAAGAGSGPGR*LICDPL
Trigger: TAAAGGATCACATATCAACCACCGCCCAGGACCACT...GCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCTGTGGGCCTGGCGGTAGACTCTGTGCGGAATGGAGCAGGGGCTCAGGCTGGAGTGGTCCTGGGCGGTaGTTGATATGTGATCCTTTA +
Preference number: 4 (lower is better)
Translates to: GCGPGGRLCAEWSRGSGWSGPGR*LICDPL
Trigger: TAAAGGATCACATATCAACCACCGCCCAGGACCACT...CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCTACCGCCAGGCCCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR CCA 90 bp GGACAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGAGCAGGGGCTCAGGCTaGCTAGTGCAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GQMSMAEPSRRLVPYPVGSRGSG*LVQSPG
Trigger: ACCTGGGCTCTGCACTAGCCAGCCTGAGCCCCTGCT...CCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCAGGCTGGCTAGTGCAGAGCCCAGGTGCTGGATGTAGTCCAAAATCGTCCAGGAGCAGGGGCTCAGGCTaGCTAGTGCAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SGWLVQSPGAGCSPKSSRSRGSG*LVQSPG
Trigger: ACCTGGGCTCTGCACTAGCCAGCCTGAGCCCCTGCT...CCTGGACGATTTTGGACTACATCCAGCACCTGGGCTCTGCACTAGCCAGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR CCA 90 bp CTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTAGACTCTGTGCGGAATaGAGCAGGGGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKSLPRMGMLCACPRCSVRLCAE*SRGSGW
Trigger: CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCT...AACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000575076.5
CDS-3UTR CCA 90 bp GGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCAGAGATGCCCGACCATaGCAGGAAGCTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GFFGLVLEGDGPFPLLRPRDARP*QEAAEQ
Trigger: CTGCTCTGCAGCTTCCTGCCATGGTCGGGCATCTCT...GGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTAGAGATGCCCGACCATaGCAGGAAGCTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: AEEPATDGHALRMPTMFCRDARP*QEAAEQ
Trigger: CTGCTCTGCAGCTTCCTGCCATGGTCGGGCATCTCT...ACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
CDS-3UTR CCA 90 bp GGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTAGAGATGCCCGACCATaGCAGGAAGCTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GSGRGRAIPFIAPPCSEARDARP*QEAAEQ
Trigger: CTGCTCTGCAGCTTCCTGCCATGGTCGGGCATCTCT...AGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGACTCGATGCCACTCTTaGAAGAGATGCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: CHGWACSAHAHDVLFPSPTRCHS*KRCPTM
Trigger: CATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGT...CGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCCCAGCCGACATCACATaGTCCGGCTGTACTCGATGC +
Preference number: 4 (lower is better)
Translates to: VAGGTKLPYLCVCCGVPAPADIT*SGCTRC
Trigger: GCATCGAGTACAGCCGGACCATGTGATGTCGGCTGG...GGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGCCAGCCGACATCACATaGTCCGGCTGTACTCGATGC +
Preference number: 4 (lower is better)
Translates to: RAIPFIAPPCSEAPVPLRPADIT*SGCTRC
Trigger: GCATCGAGTACAGCCGGACCATGTGATGTCGGCTGG...CCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGGGGAGCTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: RGAEEPATDGHALRMPTMAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...CATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAGCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
CDS-3UTR CCA 90 bp CCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGAGGGCAGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: PGRSCKNRQRSGRGPVRAAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...TGCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: AYLPRMGMLCACPRCSVPTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: SAVAYLPRMGMLCACPRCTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...ACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACAACACTGGGTCAGCCCTaGGGACGGTGCATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPCRRKSPPAFQEGAARTTLGQP*GRCMRR
Trigger: CCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGT...TGTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCTTTGGGCTGGTTCTaGAAGGGGACGGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: CGVPATDGHALRMPTMFCSLGWF*KGTGHS
Trigger: GGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGA...ACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCCAGGCTTCTTTGGGCTaGTTCTGGAAGGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: GHSLYCAPLFRGSCAFTVQASLG*FWKGTG
Trigger: GCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTG...GACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAAGTTCAAGAGGGGACCTaGGGCTGCCCCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: SSLAGESPLQLSRKELQEVQEGT*GCPSTL
Trigger: CAGGGTGCTGGGGCAGCCCCAGGTCCCCTCTTGAAC...TTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGCATTCTGAGGGCCCCTaGCCCCAGCTGAGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: RAIPFIAPPCSEAPVPLRHSEGP*PQLSSR
Trigger: TCTTGAACTCAGCTGGGGCCAGGGGCCCTCAGAATG...CCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGCATTCTGAGGGCCCCTaGCCCCAGCTGAGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: AGSGRGRAIPFIAPPCSEHSEGP*PQLSSR
Trigger: TCTTGAACTCAGCTGGGGCCAGGGGCCCTCAGAATG...CTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTGGTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCTCGTCCCTTACCCTGTaGGGCAGAAATAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: VVDSAVPTAPSGSAVLCASSLTL*GRNRNH
Trigger: GTGATTTCTATTTCTGCCCCACAGGGTAAGGGACGA...GGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGGGCCTTCCACAATCTGTTCAACACTaGGCTGGACACTGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: SPRPLPALPFSVPIQGLPQSVQH*AGHCSD
Trigger: ATCACTGCAGTGTCCAGCCCAGTGTTGAACAGATTG...TGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGGCAATCTGTTCAACACTaGGCTGGACACTGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: PVNAATLGQPWGRCMRRGQSVQH*AGHCSD
Trigger: ATCACTGCAGTGTCCAGCCCAGTGTTGAACAGATTG...CCCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGGCTGAGCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCCAATCTGTTCAACACTaGGCTGGACACTGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: GAEPQSSVLARKASPRLPQSVQH*AGHCSD
Trigger: ATCACTGCAGTGTCCAGCCCAGTGTTGAACAGATTG...GGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGCTCAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCTCCCAGGGCACTGGTAACTGCACGGAAGGTGCTGAGGAGTAGGAACCGTCCTTCTCCCAACTCAGGCTaGCTCCGCACTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PPRALVTARKVLRSRNRPSPNSG*LRTSFL
Trigger: GAGGAAGGAAGTGCGGAGCCAGCCTGAGTTGGGAGA...AGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCCTTGTCATTCACACTCTCTaGAGCTCTTCTCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: GPAAGAGRRAQLDGWQLLVIHTL*SSSPNS
Trigger: TGAGTTGGGAGAAGAGCTCCAGAGAGTGTGAATGAC...AAGGAGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000572169.6
ENST00000649205.1
CDS-3UTR CCA 90 bp CAGGGTGGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCAGTCTGGGTACTCGATaGGGAACCAGTCGCCACACA +
Preference number: 4 (lower is better)
Translates to: QGGAARTLCHGFVTLQLCSLGTR*GTSRHT
Trigger: TGTGTGGCGACTGGTTCCCCATCGAGTACCCAGACT...GCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCCACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATAGTCTGGGTACTCGATaGGGAACCAGTCGCCACACA +
Preference number: 4 (lower is better)
Translates to: CLLWRTCHGWACSAHAHDSLGTR*GTSRHT
Trigger: TGTGTGGCGACTGGTTCCCCATCGAGTACCCAGACT...ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGAGGGGAGCTGAAGAGCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGAGTCTGGGTACTCGATaGGGAACCAGTCGCCACACA +
Preference number: 4 (lower is better)
Translates to: GGELKSLCVCCGVPATDGSLGTR*GTSRHT
Trigger: TGTGTGGCGACTGGTTCCCCATCGAGTACCCAGACT...CCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTTCAGCTCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
CDS-3UTR TCA 90 bp GTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCA +
Preference number: 4 (lower is better)
Translates to: VLEGDGPFPLLRPLVPRLLCRAS*TLSRRP
Trigger: TGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAG...GAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCA +
Preference number: 4 (lower is better)
Translates to: WAGSGRGRAIPFIAPPCSLCRAS*TLSRRP
Trigger: TGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAG...GGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCAGTCAGCCTGTGTTGTTGGTGGTaGGGACATGCAGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: WCGPPASTVRSAEVQAVSLCCWW*GHAGKW
Trigger: CCATTTACCTGCATGTCCTCACCACCAACAACACAG...GCTGACTGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGGATAGTGGTGCTGCTTaGAGTCTCTGTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: EGRPLPVNAATLGQPWGRDSGAA*SLCFHR
Trigger: TCTATGAAAACAGAGACTTCAAGCAGCACCACTATC...CCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GTGTCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCAACCGTCCTGATGCGTaGCCGCCTGTGCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: VSIILAFLPCRRKSPPAFNRPDA*PPVPGG
Trigger: GCCCCCTGGCACAGGCGGTCACGCATCAGGACGGTT...GAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGCAACCGTCCTGATGCGTaGCCGCCTGTGCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: APVPLRSSVSIILAFLPCNRPDA*PPVPGG
Trigger: GCCCCCTGGCACAGGCGGTCACGCATCAGGACGGTT...GCAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGCTGCACGGAAGGTGCTaGGGAGTAGGAACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: VPPLQEKVPSSFPGRSCKLHGRC*GVGTVL
Trigger: CAGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAG...CTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGCTGCACGGAAGGTGCTaGGGAGTAGGAACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: QMSMAEPSRRLVPYPVGQLHGRC*GVGTVL
Trigger: CAGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAG...CTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTCTGCACGGAAGGTGCTaGGGAGTAGGAACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: LAFLPCRRKSPPAFQEGALHGRC*GVGTVL
Trigger: CAGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAG...AGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp ACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATATGCACCTGCGGCACTaGCAGCATCTCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: TKLPYLCVCCGVPATDGHMHLRH*QHLCPQ
Trigger: CTGAGGGCAGAGATGCTGTCAGTGCCGCAGGTGCAT...ATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CAGGGTGGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCGATGCTAGAAGTATGTaGTGCACCTGCGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: QGGAARTLCHGFVTLQLCDARSM*CTCGTD
Trigger: GTCAGTGCCGCAGGTGCATCACATACTTCTAGCATC...GCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCCACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGATGCTAGAAGTATGTaGTGCACCTGCGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: CLLWRTCHGWACSAHAHDDARSM*CTCGTD
Trigger: GTCAGTGCCGCAGGTGCATCACATACTTCTAGCATC...ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGAAGGACACAGGTCCCTaGGGCCCCGTCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SIILAFLPCRRKSPPAFQKDTGP*GPVCPG
Trigger: CCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTT...CTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp ACAAGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCTGTCTGCAGGGTGGGGCCTCTaGGCCCGAGGACAAATGTCC +
Preference number: 4 (lower is better)
Translates to: TRQMAALRPNVELSFLLSAGWGL*ARGQMS
Trigger: GGACATTTGTCCTCGGGCTCAGAGGCCCCACCCTGC...AGACAGGAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTGGCTGGACACTGCAGTaGTCAGGGGCAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: APLFRGSCAFTVKCVHNTGWTLQ*SGAGVG
Trigger: CCCCACACCTGCCCCTGATCACTGCAGTGTCCAGCC...AGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GGGCAGGGTGGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTAGATATCACGATACCATaGGTCTGGGTACTCGATGGG +
Preference number: 4 (lower is better)
Translates to: GQGGAARTLCHGFVTLQLDITIP*VWVLDG
Trigger: CCCATCGAGTACCCAGACTCATGGTATCGTGATATC...TAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCCACCCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGGATATCACGATACCATaGGTCTGGGTACTCGATGGG +
Preference number: 4 (lower is better)
Translates to: PRMGMLCACPRCSVPEPVDITIP*VWVLDG
Trigger: CCCATCGAGTACCCAGACTCATGGTATCGTGATATC...CACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCGATATCACGATACCATaGGTCTGGGTACTCGATGGG +
Preference number: 4 (lower is better)
Translates to: HALRMPTMFCSRARVAPGDITIP*VWVLDG
Trigger: CCCATCGAGTACCCAGACTCATGGTATCGTGATATC...GCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGATATCACGATACCATaGGTCTGGGTACTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLDITIP*VWVLSG
Trigger: TCCAGAGAGTACCCAGACTCATGGTATCGTGATATC...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424546.6
CDS-3UTR GCA 90 bp CTTTCCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGAGCACTCTTGGAAGAGATaGCCGACCATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LSRKELQEQAAEWERPSEHSWKR*PTMAGS
Trigger: GCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTG...CTCACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AAGAGCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCAAGAGCCTTTGTGTCTaGTGTGGCGTACCTGCCACG +
Preference number: 4 (lower is better)
Translates to: KSLCVCCGVPATDGHALRKSLCV*CGVPAT
Trigger: CGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTT...GCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
CDS-3UTR GCA 90 bp TGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACTGCACGGAATTTCCAGGAAGGAGCTaGAAGAACAGGCAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: CQGPTGSVTSQGTGNCTEFPGRS*KNRQRS
Trigger: ACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAA...TTCCGTGCAGTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTTTCCAGGAAGGAGCTaGAAGAACAGGCAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: SAVAYLPRMGMLCACPRCFPGRS*KNRQRS
Trigger: ACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAA...ACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGTGTGTCCATAATACTTaGGTTCCTCCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PPSECSHTGSALGTVHAQCVHNT*VPPLQE
Trigger: CTCCTGCAAGGGAGGAACGCAAGTATTATGGACACA...CTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTGTTCCGAGGCTCCTGTaGCTTTACGGTCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SAVAYLPRMGMLCACPRCVPRLL*LYGQVC
Trigger: ACACACTTGACCGTAAAGGCACAGGAGCCTCGGAAC...ACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGGGCCATTCCCTTTATTaGGCCCCCTTGTTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PRLLWAGSGRGRAIPFIAGHSLY*APLFRG
Trigger: GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCC...CGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCGGCCATTCCCTTTATTaGGCCCCCTTGTTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: CVPPLQEKVPSSFPGRSCGHSLY*APLFRG
Trigger: GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCC...GCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTATGCGTGACCGCCTGTaGCAGGGGGCTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: APLFRGSCAFTVKCVHNTMRDRL*QGAEPQ
Trigger: CTGAGGCTCAGCCCCCTGGCACAGGCGGTCACGCAT...AGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCCAGCTGAATGGAGCATaGCAAGGTCCGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GHSLYCAPLFRGSCAFTVQLNGA*QGPTGS
Trigger: ACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTG...GACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCACAGCTTCCTCCTGTCTaGATGTGGCCAGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: HQAPIPLCLLWRTCHGWAQLPPV*MWPGLG
Trigger: TCCAAGGCCTGGCCACATGCAGACAGGAGGAAGCTG...TGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGCCATGGAGCCCTCCTGCCTGGTGCCTaGCTTCATTCTGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: IKALMDPKSGAQPSCHGALLPGA*LHSEGP
Trigger: GGGGCCCTCAGAATGAAGGCAGGCACCAGGCAGGAG...GGCTCCATGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGGAGCTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTCAGTCGCCACACAGGTaGTTCACAGTGTCTATGTCA +
Preference number: 4 (lower is better)
Translates to: GELKSLPRMGMLCACPRCQSPHR*FTVSMS
Trigger: TGACATAGACACTGTGAAGCACCTGTGTGGCGACTG...ACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000570819.5
ENST00000575076.5
CDS-3UTR GCA 90 bp TCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCACAGTCGCCACACAGGTaGTTCACAGTGTCTATGTCA +
Preference number: 4 (lower is better)
Translates to: SAHAHDVLFPSPCSTGPAQSPHR*FTVSMS
Trigger: TGACATAGACACTGTGAAGCACCTGTGTGGCGACTG...TGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGCCCTACAAGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCTCTGCCGTTCTCTGTaGCCATCCAGGGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GPTRQMAALRPNVELSFLLCRSL*PSRAFH
Trigger: GTGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAG...GAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCTTGTAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCAAACCTCTGGGCTGTaGTGGTGCATAAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VLEGDGPFPLLRPLVPRLQTSGL*WCIRWW
Trigger: CCACCACCTTATGCACCAGCACAGCCCAGAGGTTTG...GAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCAGGTGCACAGCCCAGTTaGCATGGAGCCTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: WLEAPSSHTFVSAVAYLPGAQPS*HGACCV
Trigger: AACACAGCAGGCTCCATGGCAACTGGGCTGTGCACC...TGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCGGTGCACAGCCCAGTTaGCATGGAGCCTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: QAPIPLCLLWRTCHGWACGAQPS*HGACCV
Trigger: AACACAGCAGGCTCCATGGCAACTGGGCTGTGCACC...GCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGGGGCTCAGCGCATCCTaGAGGCGAAGGGAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: PCSEAPVPLRSSVSIILAGLSAS*RRREPG
Trigger: TCCCGGCTCCCTTCGCCTCCAGGATGCGCTGAGCCC...CGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
CDS-3UTR CCA 90 bp ATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCTATCATTCCCACAATaGCACCTCTGTAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: MPTMFCSRARVAPGLQLGLSFPQ*HLCRLQ
Trigger: CTGCAACCTACAGAGGTGCCATTGTGGGAATGATAG...CCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCTATCATTCCCACAATaGCACCTCTGTAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: VDSAVPTAPSGSAVLCAHLSFPQ*HLCRLQ
Trigger: CTGCAACCTACAGAGGTGCCATTGTGGGAATGATAG...ATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGAGTGGTCCTGGGCGGTaGTTGATATGTGATCCTTTA +
Preference number: 4 (lower is better)
Translates to: LRMPTMFCSRARVAPGLQSGPGR*LICDPL
Trigger: TAAAGGATCACATATCAACCACCGCCCAGGACCACT...CTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTGCCTGGTGCCTGCCTTCAGTGGTCCTGGGCGGTaGTTGATATGTGATCCTTTA +
Preference number: 4 (lower is better)
Translates to: SCQHRQGGGCCSCLVPAFSGPGR*LICDPL
Trigger: TAAAGGATCACATATCAACCACCGCCCAGGACCACT...GAAGGCAGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGGGACATGCAGGTAAATaGCTTTGCAGTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GRGRAIPFIAPPCSEAPVGHAGK*LCSGPG
Trigger: CCCAGGACCACTGCAAAGCCATTTACCTGCATGTCC...CACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGATGCCTGTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCGGACATGCAGGTAAATaGCTTTGCAGTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RCLSSAGQLNGACQGPTGGHAGK*LCSGPG
Trigger: CCCAGGACCACTGCAAAGCCATTTACCTGCATGTCC...GCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCAAGAGATGCCCGACCATaGCAGGAAGCTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: WLEAPSSHTFVSAVAYLPRDARP*QEAAEQ
Trigger: CTGCTCTGCAGCTTCCTGCCATGGTCGGGCATCTCT...TGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTACTCGATGCCACTCTTaGAAGAGATGCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: LLWRTCHGWACSAHAHDVTRCHS*KRCPTM
Trigger: CATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGT...AACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGACTCGATGCCACTCTTaGAAGAGATGCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: RTCHGWACSAHAHDVLFPTRCHS*KRCPTM
Trigger: CATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGT...CGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: WRTCHGWACSAHAHDVLFTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...GAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: VAYLPRMGMLCACPRCSVTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...AACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGCGTACCTGCCACGGATaGGCATGCTCTGCGCATGCC +
Preference number: 4 (lower is better)
Translates to: FPLLRPLVPRLLCLYGQVRTCHG*ACSAHA
Trigger: GGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG...CACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCTGTGCCCATCCAGGGCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATCCTTTGTGTCTGCTGTaGCGTACCTGCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: SVPIQGLPLLWLEAPSSHPLCLL*RTCHGW
Trigger: CCATCCGTGGCAGGTACGCCACAGCAGACACAAAGG...ATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCTGGATGGGCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACCTTTGTGTCTGCTGTaGCGTACCTGCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: WLEAPSSHTFVSAVAYLPPLCLL*RTCHGW
Trigger: CCATCCGTGGCAGGTACGCCACAGCAGACACAAAGG...TGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTAGAACAGGCAGCGGAGTaGGAGAGGCCCAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: TFVAGGTKLPYLCVCCGVEQAAE*ERPSEG
Trigger: GCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTC...TACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCATCTTTGGGCTGGTTCTaGAAGGGGACGGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: WLEAPSSHTFVSAVAYLPSLGWF*KGTGHS
Trigger: GGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGA...TGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGCAGGCTTCTTTGGGCTaGTTCTGGAAGGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: VPPLQEKVPSSFPGRSCKQASLG*FWKGTG
Trigger: GCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTG...CTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTTGCCATGGAGCCTGCTGTGTTAGCTTGGCACAAGTCACCAAACCTCTGGGCTCTCATCAGCCCCTCATaGAGGAGTGGGGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: VAMEPAVLAWHKSPNLWALISPS*RSGGHS
Trigger: GGAGTGGCCCCCACTCCTCCATGAGGGGCTGATGAG...AGCCCAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGCTCCATGGCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTAGCAGGTCAGCTGAATaGAGCATGCCAAGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: GSGRGRAIPFIAPPCSEASRSAE*SMPRSD
Trigger: GTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCT...AGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCTGTCTGCATGGAGCAGCAGCTTGTaGCAGCATGAGGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: RQMAALRPNVELSFLLSAWSSSL*QHEGGR
Trigger: CCGCCCTCCCTCATGCTGCCACAAGCTGCTGCTCCA...TGCAGACAGGAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATCCTCCTGTCTGCATGTaGCCAGGCCTTGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TKLPYLCVCCGVPATDGHPPVCM*PGLGAA
Trigger: TGCTGCTCCAAGGCCTGGCCACATGCAGACAGGAGG...ATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCGTGGCTGGGCAGCTCTaGAGGCGGAAGGACACAGGT +
Preference number: 4 (lower is better)
Translates to: LYCAPLFRGSCAFTVKCVVAGQL*RRKDTG
Trigger: ACCTGTGTCCTTCCGCCTCCAGAGCTGCCCAGCCAC...GACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATGGAGCCTGCTGTGTTAGCTTGGCACAAGTCACCAAACCTCTGGGCTGTGCTGGTGGCTGGGCAGCTCTaGAGGCGGAAGGACACAGGT +
Preference number: 4 (lower is better)
Translates to: MEPAVLAWHKSPNLWAVLVAGQL*RRKDTG
Trigger: ACCTGTGTCCTTCCGCCTCCAGAGCTGCCCAGCCAC...CAGCACAGCCCAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGCTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTCCCCACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTGTTCAAGAGGGGACCTaGGGCTGCCCCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: VPTQIKALMDPKSGAQPSVQEGT*GCPSTL
Trigger: CAGGGTGCTGGGGCAGCCCCAGGTCCCCTCTTGAAC...ACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGTGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGGGAGAGGCCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTTCGTCCCTTACCCTGTaGGGCAGAAATAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: WERPSEGRPLPVNAATLGSSLTL*GRNRNH
Trigger: GTGATTTCTATTTCTGCCCCACAGGGTAAGGGACGA...ACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGGCCTCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTTTCGTCCCTTACCCTGTaGGGCAGAAATAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: ALEAEGHRSLRPRLPRVVSSLTL*GRNRNH
Trigger: GTGATTTCTATTTCTGCCCCACAGGGTAAGGGACGA...AACAACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGCAATCTGTTCAACACTaGGCTGGACACTGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLQSVQH*AGHCSD
Trigger: ATCACTGCAGTGTCCAGCCCAGTGTTGAACAGATTG...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTTCTCCCAACTCAGGCTaGCTCCGCACTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LKSLPRMGMLCACPRCSVSPNSG*LRTSFL
Trigger: GAGGAAGGAAGTGCGGAGCCAGCCTGAGTTGGGAGA...AACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407558.9
ENST00000424546.6
CDS-3UTR CCA 90 bp CCTCCCAGGGCACTGGTAACTGCACGGAAGGTGCTGAGGAGTAGGAACCGTCCTAGTCTGGGTACTCGATaGGGAACCAGTCGCCACACA +
Preference number: 4 (lower is better)
Translates to: PPRALVTARKVLRSRNRPSLGTR*GTSRHT
Trigger: TGTGTGGCGACTGGTTCCCCATCGAGTACCCAGACT...AGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCAGTCTGGGTACTCGATaGGGAACCAGTCGCCACACA +
Preference number: 4 (lower is better)
Translates to: APSSHTFVSAVAYLPRMGSLGTR*GTSRHT
Trigger: TGTGTGGCGACTGGTTCCCCATCGAGTACCCAGACT...GCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGCGTCATTCACACCTCGTaGGGGAGCCGGCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: APVPLRSSVSIILAFLPCVIHTS*GSRRPL
Trigger: CAGCGGCCGCCGGCTCCCCCACGAGGTGTGAATGAC...GCAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414063.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
CDS-3UTR CCA 90 bp TCAAGTAAGAGGGAACCTATGCCGTGCTTCCTGAACTCTTTCACGACGCCCAGAGTCATTCACACCTCGTaGGGGAGCCGGCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SSKREPMPCFLNSFTTPRVIHTS*GSRRPL
Trigger: CAGCGGCCGCCGGCTCCCCCACGAGGTGTGAATGAC...TCTGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAGGTTCCCTCTTACTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573345.5
CDS-3UTR CCA 90 bp TCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAAGTCTGGGTACTCTCTaGAGCTCTTCTCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: SAHAHDVLFPSPCSTGPASLGTL*SSSPNS
Trigger: TGAGTTGGGAGAAGAGCTCCAGAGAGTACCCAGACT...TGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424546.6
CDS-3UTR CCA 90 bp CCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGAGGGCATTCCACTTTTGTGGCTaGAGGCACCAAGCTCCCATA +
Preference number: 4 (lower is better)
Translates to: PGRSCKNRQRSGRGPVRAFHFCG*RHQAPI
Trigger: TATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAA...TGCCCTCACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATGGAGCCTGCTGTGTTAGCTTGGCACAAGTCACCAAACCTCTGGGCTGTGCTGCCACACAGCTGGGCCTaGGTGCTCCAGGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: MEPAVLAWHKSPNLWAVLPHSWA*VLQEHE
Trigger: CTCATGCTCCTGGAGCACCCAGGCCCAGCTGTGTGG...CAGCACAGCCCAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGCTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CGCCTCTCGGTCCCCACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCATATGGGCCACACAGCTaGGCCTGGGTGCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RLSVPTQIKALMDPKSGAYGPHS*AWVLQE
Trigger: CTCCTGGAGCACCCAGGCCCAGCTGTGTGGCCCATA...TGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGTGGGGACCGAGAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGGGCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGTATGGGCCACACAGCTaGGCCTGGGTGCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RAFHFCGWRHQAPIPLCLYGPHS*AWVLQE
Trigger: CTCCTGGAGCACCCAGGCCCAGCTGTGTGGCCCATA...CAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGGGCCTTCAAAACTCCATTCTCTaGAGCTCTTCTCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: QSPRPLPALPFSVPIQGLQNSIL*SSSPNS
Trigger: TGAGTTGGGAGAAGAGCTCCAGAGAATGGAGTTTTG...AAGGCCCTGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649360.1
CDS-3UTR TCA 90 bp TGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGATATCACGATACCATaGGTCTGGGTACCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: WAGSGRGRAIPFIAPPCSDITIP*VWVPRG
Trigger: CCCACGAGGTACCCAGACTCATGGTATCGTGATATC...GGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360862.9
CDS-3UTR TCA 90 bp TGTCTGCCTGCAGCCACTAGGCGCCTCTCGGTCCCCACACAAATAAAGGCACTGCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCA +
Preference number: 4 (lower is better)
Translates to: CLPAATRRLSVPTQIKALLCRAS*TLSRRP
Trigger: TGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAG...CAGTGCCTTTATTTGTGTGGGGACCGAGAGGCGCCTAGTGGCTGCAGGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp AGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGCTGTGTTGTTGGTGGTaGGGACATGCAGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: RACHGWACSAHAHDVLFPLCCWW*GHAGKW
Trigger: CCATTTACCTGCATGTCCTCACCACCAACAACACAG...CGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000575076.5
CDS-3UTR TCA 90 bp AGCTTTCCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGGATGCTAGAAGTATGTaGTGCACCTGCGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: SFPGRSCKNRQRSGRGPVDARSM*CTCGTD
Trigger: GTCAGTGCCGCAGGTGCATCACATACTTCTAGCATC...CACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGGAAATAGAAATCACATaGTCGCCACTGATTCGCAGT +
Preference number: 4 (lower is better)
Translates to: PSECSHTGSALGTVHAQGEIEIT*SPLIRS
Trigger: ACTGCGAATCAGTGGCGATCATGTGATTTCTATTTC...CCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGCAGGGTGGGGCCTCTaGGCCCGAGGACAAATGTCC +
Preference number: 4 (lower is better)
Translates to: SIILAFLPCRRKSPPAFQAGWGL*ARGQMS
Trigger: GGACATTTGTCCTCGGGCTCAGAGGCCCCACCCTGC...CTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCAGGGAACCTATGCCGTaGTTCCTGAACTCTTTCACG +
Preference number: 4 (lower is better)
Translates to: AFVSAVAYLPRMGMLCACREPMP*FLNSFT
Trigger: CGTGAAAGAGTTCAGGAAGCACGGCATAGGTTCCCT...GCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360862.9
ENST00000414063.6
CDS-3UTR GCA 90 bp GTAGTCCAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTACCATGGCAGGAAGCTaGAGAGCAGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VVQNRPGRVAAVDVEDIGTMAGS*RAGCGP
Trigger: AGGCCCACAGCCTGCTCTGCAGCTTCCTGCCATGGT...ACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTGGACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR GCA 90 bp CCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCACTCTTGGAAGAGATaGCCGACCATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PRLLWAGSGRGRAIPFIAHSWKR*PTMAGS
Trigger: GCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTG...CGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGCTGGCTAGTGCAGAGCCCAGGTGCTGGATGTAGTCCAAAATCGTCCAGGGAGCACTCTTGGAAGAGATaGCCGACCATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GWLVQSPGAGCSPKSSREHSWKR*PTMAGS
Trigger: GCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTG...CTCCCTGGACGATTTTGGACTACATCCAGCACCTGGGCTCTGCACTAGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR GCA 90 bp TGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACACTCTTGGAAGAGATaGCCGACCATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: WLEAPSSHTFVSAVAYLPHSWKR*PTMAGS
Trigger: GCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTG...TGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCTCCCAGGGCACTGGTAACTGCACGGAAGGTGCTGAGGAGTAGGAACCGTCCTTCCGGCTGTACTCGATaGCACTCTTGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: PPRALVTARKVLRSRNRPSGCTR*HSWKRC
Trigger: GCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGA...AGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCGGGCCTGGTGGCGGCTaGCCAGCCGACATCACATGG +
Preference number: 4 (lower is better)
Translates to: CSEAPVPLRSSVSIILAFGPGGG*PADITW
Trigger: CCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCC...GAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGAAATAGAAATCACATGGGGCCTGGTGGCGGCTaGCCAGCCGACATCACATGG +
Preference number: 4 (lower is better)
Translates to: SLPEDSSLTLWGRNRNHMGPGGG*PADITW
Trigger: CCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCC...CATGTGATTTCTATTTCTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCACTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: LLRPLVPRLLCLYGQVCPLLWRT*HGWACS
Trigger: AGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG...TGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CGCCTCTCGGTCCCCACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: RLSVPTQIKALMDPKSGALLWRT*HGWACS
Trigger: AGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG...TGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGTGGGGACCGAGAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTGCCCCTCCCAGTGAATaGAGCCACACTGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: APLFRGSCAFTVKCVHNTAPPSE*SHTGSA
Trigger: GGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC...AGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGTTCCGAGGCTCCTGTaGCTTTACGGTCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: KSLPRMGMLCACPRCSVPVPRLL*LYGQVC
Trigger: ACACACTTGACCGTAAAGGCACAGGAGCCTCGGAAC...GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407558.9
ENST00000575076.5
CDS-3UTR GCA 90 bp TTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGTCAGAGCTCTGTGCTTaGGAGGAAAGCCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LRSSLAGESPLQLSRKELSELCA*EESLPQ
Trigger: CTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGA...CAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACTCAGAGCTCTGTGCTTaGGAGGAAAGCCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PPLQEKVPSSFPGRSCKNSELCA*EESLPQ
Trigger: CTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGA...GTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGAGCCTGCTGTGTTAGCTTGGCACAAGTCACCAAACCTCTGGGCTGTGCTGGTCAGCTGAATGGAGCATaGCAAGGTCCGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GACCVSLAQVTKPLGCAGQLNGA*QGPTGS
Trigger: ACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTG...ACCAGCACAGCCCAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTAAGGAGTCTCGGCGATaGCTGTCCTCAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LAFLPCRRKSPPAFQEGAKESRR*LSSAGQ
Trigger: CTGACCTGCTGAGGACAGGCATCGCCGAGACTCCTT...AGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTGTCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCACAGGACTGCCCCCTaGCCACAAGGCCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: VSIILAFLPCRRKSPPAFHRTAP*PQGQAL
Trigger: TAGGGCCTGGCCTTGTGGGCAGGGGGCAGTCCTGTG...GAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGATGGGGCTCTATGCCGTaGTTCCTGAACTCTTTCACG +
Preference number: 4 (lower is better)
Translates to: VPATDGHALRMPTMFCSRWGSMP*FLNSFT
Trigger: CGTGAAAGAGTTCAGGAAGCACGGCATAGAGCCCCA...TCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421765.7
CDS-3UTR GCA 90 bp TGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCCCATACCTTTGTGTCTaGTGTGGCGTACCTGCCACG +
Preference number: 4 (lower is better)
Translates to: CVPPLQEKVPSSFPGRSCPYLCV*CGVPAT
Trigger: CGTGGCAGGTACGCCACAGCAGACACAAAGGTATGG...GCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCCCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCAAACCTCTGGGCTGTaGTGGTGCATAAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PPGFFGLVLEGDGPFPLLQTSGL*WCIRWW
Trigger: CCACCACCTTATGCACCAGCACAGCCCAGAGGTTTG...CAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGCGCCCACCCCACACCCTaGCTATGGGCCACACAGCTG +
Preference number: 4 (lower is better)
Translates to: APVPLRSSVSIILAFLPCAHPTP*LWATQL
Trigger: CAGCTGTGTGGCCCATAGGCAGGGTGTGGGGTGGGC...GCAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGACTATCATTCCCACAATaGCACCTCTGTAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: VSAVAYLPRMGMLCACPRLSFPQ*HLCRLQ
Trigger: CTGCAACCTACAGAGGTGCCATTGTGGGAATGATAG...TCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTGGACATGCAGGTAAATaGCTTTGCAGTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VAYLPRMGMLCACPRCSVGHAGK*LCSGPG
Trigger: CCCAGGACCACTGCAAAGCCATTTACCTGCATGTCC...AACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCTGCCCAGCCGACATCACATGGTCCGGCTGTACTCGATGCCACTCTTGGAAGGGACATGCAGGTAAATaGCTTTGCAGTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GCPADITWSGCTRCHSWKGHAGK*LCSGPG
Trigger: CCCAGGACCACTGCAAAGCCATTTACCTGCATGTCC...CTTCCAAGAGTGGCATCGAGTACAGCCGGACCATGTGATGTCGGCTGGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR CCA 90 bp GCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCGGACATGCAGGTAAATaGCTTTGCAGTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: APSSHTFVSAVAYLPRMGGHAGK*LCSGPG
Trigger: CCCAGGACCACTGCAAAGCCATTTACCTGCATGTCC...GCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCTGTCCTCAGCAGGTCAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGGACATGCAGGTAAATaGCTTTGCAGTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PVLSRSAEWSMPRSDGQCGHAGK*LCSGPG
Trigger: CCCAGGACCACTGCAAAGCCATTTACCTGCATGTCC...ACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCTGAGGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTGAGCCCGAGGACAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTAAGACTCTGTGCGGAATaGAGCAGGGGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LSPRTNVHGRAFQKTRPLRLCAE*SRGSGW
Trigger: CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCT...TAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTGTCCTCGGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGCCATGGAGCCTGCTGTGTTAGCTTGGCACAAGTCACCAAACCTCTGGGCTGTAGACTCTGTGCGGAATaGAGCAGGGGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CHGACCVSLAQVTKPLGCRLCAE*SRGSGW
Trigger: CCAGCCTGAGCCCCTGCTCCATTCCGCACAGAGTCT...ACAGCCCAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGCTCCATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCAGGCTGGCTAGTGCAGAGCCCAGGTGCTGGATGTAGTCCAAAATCGTCCAGGAGAGATGCCCGACCATaGCAGGAAGCTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SGWLVQSPGAGCSPKSSRRDARP*QEAAEQ
Trigger: CTGCTCTGCAGCTTCCTGCCATGGTCGGGCATCTCT...CCTGGACGATTTTGGACTACATCCAGCACCTGGGCTCTGCACTAGCCAGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR CCA 90 bp GGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTACTCGATGCCACTCTTaGAAGAGATGCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: GSGRGRAIPFIAPPCSEATRCHS*KRCPTM
Trigger: CATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGT...AGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCAACTCGATGCCACTCTTaGAAGAGATGCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: FVSAVAYLPRMGMLCACPTRCHS*KRCPTM
Trigger: CATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGT...TGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCCAGCCGACATCACATaGTCCGGCTGTACTCGATGC +
Preference number: 4 (lower is better)
Translates to: LRSSLAGESPLQLSRKELPADIT*SGCTRC
Trigger: GCATCGAGTACAGCCGGACCATGTGATGTCGGCTGG...CAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: EEPATDGHALRMPTMFCSAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...GGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
CDS-3UTR CCA 90 bp GTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: VAGGTKLPYLCVCCGVPAAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...GGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTTTCCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGAGGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: LSRKELQEQAAEWERPSEAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...CTCACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: GHSLYCAPLFRGSCAFTVTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...GACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCCCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGACGAGCCCAGTTAGATaGCTGGCAGCTCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: PPGFFGLVLEGDGPFPLLTSPVR*LAAPCR
Trigger: TCTGCAAGGAGCTGCCAGCCATCTAACTGGGCTCGT...CAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATCCTTTGTGTCTGCTGTaGCGTACCTGCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: TKLPYLCVCCGVPATDGHPLCLL*RTCHGW
Trigger: CCATCCGTGGCAGGTACGCCACAGCAGACACAAAGG...ATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTCTTTGGGCTGGTTCTaGAAGGGGACGGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: TCVPPLQEKVPSSFPGRSSLGWF*KGTGHS
Trigger: GGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGA...GCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCAGGCTTCTTTGGGCTaGTTCTGGAAGGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: LYCAPLFRGSCAFTVKCVQASLG*FWKGTG
Trigger: GCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTG...GACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGCAGGCTTCTTTGGGCTaGTTCTGGAAGGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: HSLYCAPLFRGSCAFTVKQASLG*FWKGTG
Trigger: GCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTG...CTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGAGCAGGTCAGCTGAATaGAGCATGCCAAGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: PRLLWAGSGRGRAIPFIASRSAE*SMPRSD
Trigger: GTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCT...CGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGCGTTCAAGAGGGGACCTaGGGCTGCCCCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: APVPLRSSVSIILAFLPCVQEGT*GCPSTL
Trigger: CAGGGTGCTGGGGCAGCCCCAGGTCCCCTCTTGAAC...GCAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGACAATCTGTTCAACACTaGGCTGGACACTGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: VSAVAYLPRMGMLCACPRQSVQH*AGHCSD
Trigger: ATCACTGCAGTGTCCAGCCCAGTGTTGAACAGATTG...TCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGGTGTCTATGTCATCGTaGCAGAGGAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QMSMAEPSRRLVPYPVGQVSMSS*QRRRRL
Trigger: CAGCCTGCGCCTCCTCTGCCACGATGACATAGACAC...CTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGGTGTCTATGTCATCGTaGCAGAGGAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VPPLQEKVPSSFPGRSCKVSMSS*QRRRRL
Trigger: CAGCCTGCGCCTCCTCTGCCACGATGACATAGACAC...CTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATTTCCACTTTTGTGGCTaGAGGCACCAAGCTCCCATA +
Preference number: 4 (lower is better)
Translates to: CLLWRTCHGWACSAHAHDFHFCG*RHQAPI
Trigger: TATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAA...ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR CAA 72 bp TGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTaGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: WKGTGHSLYCAP*FRGSCAFTVKC
Trigger: ACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
3UTR CAA 72 bp CCCACAAGGCCAGGCCCTACAAGACAGATGGCAGCCTaGAGGCCTAATGTCGAGCTCAGCTTCCTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PTRPGPTRQMAA*RPNVELSFLLS
Trigger: AGACAGGAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCTTGTAGGGCCTGGCCTTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
3UTR CAA 72 bp CACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTaGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCA +
Preference number: 4 (lower is better)
Translates to: HFCGWRHQAPIP*CLLWRTCHGWA
Trigger: TGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
3UTR CAA 72 bp GCACAGCCCAGTTGCCATGGAGCCTGCTGTGTTAGCTaGGCACAAGTCACCAAACCTCTGGGCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: AQPSCHGACCVS*AQVTKPLGCAG
Trigger: ACCAGCACAGCCCAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGCTCCATGGCAACTGGGCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGGGACTTCTTGTTGGATGTaGTATCACGATACCATGAGT +
Preference number: 4 (lower is better)
Translates to: PVNAATLGQPWGRCMRRGTSCWM*YHDTMS
Trigger: ACTCATGGTATCGTGATATCACATCCAACAAGAAGT...CCCCCTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp ACAGAAGGGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGACTTCTTGTTGGATGTaGTATCACGATACCATGAGT +
Preference number: 4 (lower is better)
Translates to: TEGVRWTGRRALRAAEGWTSCWM*YHDTMS
Trigger: ACTCATGGTATCGTGATATCACATCCAACAAGAAGT...CCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCCCTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCA +
Preference number: 4 (lower is better)
Translates to: LAFLPCRRKSPPAFQEGALCRAS*TLSRRP
Trigger: TGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAG...AGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TCAGGCTGGCTAGTGCAGAGCCCAGGTGCTGGATGTAGTCCAAAATCGTCCAGGCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCA +
Preference number: 4 (lower is better)
Translates to: SGWLVQSPGAGCSPKSSRLCRAS*TLSRRP
Trigger: TGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAG...CCTGGACGATTTTGGACTACATCCAGCACCTGGGCTCTGCACTAGCCAGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573345.5
CDS-3UTR TCA 90 bp GGGCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCA +
Preference number: 4 (lower is better)
Translates to: GPSTFVAGGTKLPYLCVCLCRAS*TLSRRP
Trigger: TGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAG...GCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GCTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTCTGTGTTGTTGGTGGTaGGGACATGCAGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: AEEPATDGHALRMPTMFCLCCWW*GHAGKW
Trigger: CCATTTACCTGCATGTCCTCACCACCAACAACACAG...ACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000575076.5
CDS-3UTR TCA 90 bp GTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGTTGTTGGTGGTaGGGACATGCAGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: VLEGDGPFPLLRPLVPRLLCCWW*GHAGKW
Trigger: CCATTTACCTGCATGTCCTCACCACCAACAACACAG...GAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGACTGTGTTGTTGGTGGTaGGGACATGCAGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: VPATDGHALRMPTMFCSRLCCWW*GHAGKW
Trigger: CCATTTACCTGCATGTCCTCACCACCAACAACACAG...TCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TGGGAGAGGCCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTGATAGTGGTGCTGCTTaGAGTCTCTGTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: WERPSEGRPLPVNAATLGDSGAA*SLCFHR
Trigger: TCTATGAAAACAGAGACTTCAAGCAGCACCACTATC...ACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGGCCTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCGTCCGACGGGCAGTGTaGCCTCCCAGGGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: CSEAPVPLRSSVSIILAFVRRAV*PPRALV
Trigger: TACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGAC...GAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGTCTGCCATGGCTTTGTaGCACTGCAGCTATGCTGGG +
Preference number: 4 (lower is better)
Translates to: QMSMAEPSRRLVPYPVGQSAMAL*HCSYAG
Trigger: CCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGA...CTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CGCCTCTCGGTCCCCACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCATCACATGATCGCCACTaGTTCGCAGTGGAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: RLSVPTQIKALMDPKSGASHDRH*FAVERA
Trigger: CGCCCTCTCCACTGCGAATCAGTGGCGATCATGTGA...TGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGTGGGGACCGAGAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGATATCACGATACCATaGGTCTGGGTACTCGATGGG +
Preference number: 4 (lower is better)
Translates to: AGSGRGRAIPFIAPPCSEDITIP*VWVLDG
Trigger: CCCATCGAGTACCCAGACTCATGGTATCGTGATATC...CTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTGATATCACGATACCATaGGTCTGGGTACTCGATGGG +
Preference number: 4 (lower is better)
Translates to: CGVPATDGHALRMPTMFCDITIP*VWVLDG
Trigger: CCCATCGAGTACCCAGACTCATGGTATCGTGATATC...ACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGCCATGGAGCCTGCTGTGTTAGCTTGGCACAAGTCACCAAACCTCTGGGCTGTGCAGGTAAATGGCTTTaGAGTGGTCCTGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: CHGACCVSLAQVTKPLGCAGKWL*SGPGRW
Trigger: CCACCGCCCAGGACCACTGCAAAGCCATTTACCTGC...ACAGCCCAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGCTCCATGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACCACTCTTGGAAGAGATaGCCGACCATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PPLQEKVPSSFPGRSCKNHSWKR*PTMAGS
Trigger: GCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTG...GTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTAGTGCAGAGCCCAGGTGCTGGATGTAGTCCAAAATCGTCCAGGGAGGGTGGCTCCGGCTGTACTCGATaGCACTCTTGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: LVQSPGAGCSPKSSREGGSGCTR*HSWKRC
Trigger: GCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGA...GCCACCCTCCCTGGACGATTTTGGACTACATCCAGCACCTGGGCTCTGCACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR GCA 90 bp TGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCATCCGGCTGTACTCGATaGCACTCTTGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: WLEAPSSHTFVSAVAYLPSGCTR*HSWKRC
Trigger: GCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGA...TGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCCCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGTCCGGCTGTACTCGATaGCACTCTTGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: PPGFFGLVLEGDGPFPLLSGCTR*HSWKRC
Trigger: GCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGA...CAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGGGCATGCTCTGCGCATaGCCACGATGTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: HSLYCAPLFRGSCAFTVKGMLCA*PRCSVP
Trigger: GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCC...CTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 4 (lower is better)
Translates to: SSLAGESPLQLSRKELQERMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...TTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGGGCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCGGATGGGCATGCTCTaGGCATGCCCACGATGTTCT +
Preference number: 4 (lower is better)
Translates to: RAFHFCGWRHQAPIPLCLRMGML*ACPRCS
Trigger: AGAACATCGTGGGCATGCGCAGAGCATGCCCATCCG...CAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 4 (lower is better)
Translates to: LPLLWLEAPSSHTFVSAVCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...CACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCTTTCCAGGAAGGAGCTaGAAGAACAGGCAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: LGWFWKGTGHSLYCAPLFFPGRS*KNRQRS
Trigger: ACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAA...GAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGAGGGGAGCTGAAGAGCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGTGTGTCCATAATACTTaGGTTCCTCCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GGELKSLCVCCGVPATDGCVHNT*VPPLQE
Trigger: CTCCTGCAAGGGAGGAACGCAAGTATTATGGACACA...CCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTTCAGCTCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572942.5
CDS-3UTR GCA 90 bp CCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGGTTCCGAGGCTCCTGTaGCTTTACGGTCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: PRLLWAGSGRGRAIPFIAVPRLL*LYGQVC
Trigger: ACACACTTGACCGTAAAGGCACAGGAGCCTCGGAAC...CGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCAGTTCCGAGGCTCCTGTaGCTTTACGGTCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: WLEAPSSHTFVSAVAYLPVPRLL*LYGQVC
Trigger: ACACACTTGACCGTAAAGGCACAGGAGCCTCGGAAC...TGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCAGTTCCGAGGCTCCTGTaGCTTTACGGTCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: HQAPIPLCLLWRTCHGWAVPRLL*LYGQVC
Trigger: ACACACTTGACCGTAAAGGCACAGGAGCCTCGGAAC...TGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGGCCATTCCCTTTATTaGGCCCCCTTGTTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PFPLLRPLVPRLLCLYGQGHSLY*APLFRG
Trigger: GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCC...TTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACAGGCCATTCCCTTTATTaGGCCCCCTTGTTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LPCRRKSPPAFQEGAARTGHSLY*APLFRG
Trigger: GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCC...TGTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGAAATAGAGGCCATTCCCTTTATTaGGCCCCCTTGTTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PWQSLPEDSSLTLWGRNRGHSLY*APLFRG
Trigger: GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCC...TCTATTTCTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACATCAGAGCTCTGTGCTTaGGAGGAAAGCCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPCRRKSPPAFQEGAARTSELCA*EESLPQ
Trigger: CTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGA...TGTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGCAGCTGAATGGAGCATaGCAAGGTCCGACGGGCAGT +
Preference number: 4 (lower is better)
Translates to: FPLLRPLVPRLLCLYGQVQLNGA*QGPTGS
Trigger: ACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTG...CACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCTGTCTGCAAAGGAGTCTCGGCGATaGCTGTCCTCAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RQMAALRPNVELSFLLSAKESRR*LSSAGQ
Trigger: CTGACCTGCTGAGGACAGGCATCGCCGAGACTCCTT...TGCAGACAGGAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAAAAGGAGTCTCGGCGATaGCTGTCCTCAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SSLAGESPLQLSRKELQEKESRR*LSSAGQ
Trigger: CTGACCTGCTGAGGACAGGCATCGCCGAGACTCCTT...TTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACAGCTTCCTCCTGTCTaGATGTGGCCAGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SSLAGESPLQLSRKELQEQLPPV*MWPGLG
Trigger: TCCAAGGCCTGGCCACATGCAGACAGGAGGAAGCTG...TTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGCCATCACAGGACTGCCCCCTaGCCACAAGGCCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: TQIKALMDPKSGAQPSCHHRTAP*PQGQAL
Trigger: TAGGGCCTGGCCTTGTGGGCAGGGGGCAGTCCTGTG...ATGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGAAATAGAAATCACATGGTGACACTGCAGCTATaGTGGGCGGGACTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: SLPEDSSLTLWGRNRNHMVTLQL*WAGLRP
Trigger: GGGGCGGAGTCCCGCCCAGCATAGCTGCAGTGTCAC...CATGTGATTTCTATTTCTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGCTCCTGCCTGGTGCCTaGCTTCATTCTGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PCSEAPVPLRSSVSIILALLPGA*LHSEGP
Trigger: GGGGCCCTCAGAATGAAGGCAGGCACCAGGCAGGAG...CGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCAGTCGCCACACAGGTaGTTCACAGTGTCTATGTCA +
Preference number: 4 (lower is better)
Translates to: WRTCHGWACSAHAHDVLFQSPHR*FTVSMS
Trigger: TGACATAGACACTGTGAAGCACCTGTGTGGCGACTG...GAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGCCCTACAAGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCCATACCTTTGTGTCTaGTGTGGCGTACCTGCCACG +
Preference number: 4 (lower is better)
Translates to: GPTRQMAALRPNVELSFLPYLCV*CGVPAT
Trigger: CGTGGCAGGTACGCCACAGCAGACACAAAGGTATGG...GAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCTTGTAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CGCCTCTCGGTCCCCACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCAGGTGCACAGCCCAGTTaGCATGGAGCCTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: RLSVPTQIKALMDPKSGAGAQPS*HGACCV
Trigger: AACACAGCAGGCTCCATGGCAACTGGGCTGTGCACC...TGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGTGGGGACCGAGAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACTGCACGGAACTATCATTCCCACAATaGCACCTCTGTAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: CQGPTGSVTSQGTGNCTELSFPQ*HLCRLQ
Trigger: CTGCAACCTACAGAGGTGCCATTGTGGGAATGATAG...TTCCGTGCAGTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCCTATCATTCCCACAATaGCACCTCTGTAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: AYLPRMGMLCACPRCSVPLSFPQ*HLCRLQ
Trigger: CTGCAACCTACAGAGGTGCCATTGTGGGAATGATAG...GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCAGTGGTCCTGGGCGGTaGTTGATATGTGATCCTTTA +
Preference number: 4 (lower is better)
Translates to: AYLPRMGMLCACPRCSVPSGPGR*LICDPL
Trigger: TAAAGGATCACATATCAACCACCGCCCAGGACCACT...GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACAAGAGATGCCCGACCATaGCAGGAAGCTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LPCRRKSPPAFQEGAARTRDARP*QEAAEQ
Trigger: CTGCTCTGCAGCTTCCTGCCATGGTCGGGCATCTCT...TGTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACCAGCCGACATCACATaGTCCGGCTGTACTCGATGC +
Preference number: 4 (lower is better)
Translates to: SSLAGESPLQLSRKELQEPADIT*SGCTRC
Trigger: GCATCGAGTACAGCCGGACCATGTGATGTCGGCTGG...TTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGCCTTTGTGTCTGCTGTaGCGTACCTGCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: HSLYCAPLFRGSCAFTVKPLCLL*RTCHGW
Trigger: CCATCCGTGGCAGGTACGCCACAGCAGACACAAAGG...CTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCTGTCTGCATCTTTGGGCTGGTTCTaGAAGGGGACGGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: RQMAALRPNVELSFLLSASLGWF*KGTGHS
Trigger: GGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGA...TGCAGACAGGAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTTGCCATGGAGCCTGCTGTGTTAGCTTGGCACAAGTCACCAAACCTCTGGGCTTCTTTGGGCTGGTTCTaGAAGGGGACGGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: VAMEPAVLAWHKSPNLWASLGWF*KGTGHS
Trigger: GGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGA...AGCCCAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGCTCCATGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCCCTACAAGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCAGCAGGTCAGCTGAATaGAGCATGCCAAGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: GPTRQMAALRPNVELSFLSRSAE*SMPRSD
Trigger: GTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCT...GAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCTTGTAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTCCTCCTGTCTGCATGTaGCCAGGCCTTGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: APLFRGSCAFTVKCVHNTPPVCM*PGLGAA
Trigger: TGCTGCTCCAAGGCCTGGCCACATGCAGACAGGAGG...AGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AGCTTTCCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGAACATTACGTCCCCCTaGGGTCACCCTAAGACTCTA +
Preference number: 4 (lower is better)
Translates to: SFPGRSCKNRQRSGRGPVNITSP*GHPKTL
Trigger: TAGAGTCTTAGGGTGACCCCAGGGGGACGTAATGTT...CACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000572169.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGACCCAAGGAGTCTCGGCGATGCCTGTCCTCAGCAGGTCAGCTGAATGGAGCAAACATTACGTCCCCCTaGGGTCACCCTAAGACTCTA +
Preference number: 4 (lower is better)
Translates to: GPKESRRCLSSAGQLNGANITSP*GHPKTL
Trigger: TAGAGTCTTAGGGTGACCCCAGGGGGACGTAATGTT...TGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCGCCGAGACTCCTTGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATCTCCCAACTCAGGCTaGCTCCGCACTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLRPLVPRLLCLYGQVCPSPNSG*LRTSFL
Trigger: GAGGAAGGAAGTGCGGAGCCAGCCTGAGTTGGGAGA...TGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000572169.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTTCCAGAAGCAGGGAGGGGAGCTGAAGAGCCTTTGTGTCTGCTGTGGCGTACCAGTCTGGGTACTCGATaGGGAACCAGTCGCCACACA +
Preference number: 4 (lower is better)
Translates to: FPEAGRGAEEPLCLLWRTSLGTR*GTSRHT
Trigger: TGTGTGGCGACTGGTTCCCCATCGAGTACCCAGACT...GGTACGCCACAGCAGACACAAAGGCTCTTCAGCTCCCCTCCCTGCTTCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
CDS-3UTR CCA 90 bp GTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCTTCCACTTTTGTGGCTaGAGGCACCAAGCTCCCATA +
Preference number: 4 (lower is better)
Translates to: VAGGTKLPYLCVCCGVPAFHFCG*RHQAPI
Trigger: TATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAA...GGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAACTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCA +
Preference number: 4 (lower is better)
Translates to: PFPLLRPLVPRLLCLYGQLCRAS*TLSRRP
Trigger: TGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAG...TTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TGCAGAGCAGGCTGTGGGCCTGGCGGTAGACTCTGTGCGGAATGGAGCAGGGGCGCGGTGGTTGATATGTaGTCCTTTAAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: CRAGCGPGGRLCAEWSRGAVVDM*SFKLSS
Trigger: ACTTGAAAGTTTAAAGGATCACATATCAACCACCGC...GCCCCTGCTCCATTCCGCACAGAGTCTACCGCCAGGCCCACAGCCTGCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR TCA 90 bp CTGCCCAGCCGACATCACATGGTCCGGCTGTACTCGATGCCACTCTTGGAAGAGCTGTGTTGTTGGTGGTaGGGACATGCAGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: LPSRHHMVRLYSMPLLEELCCWW*GHAGKW
Trigger: CCATTTACCTGCATGTCCTCACCACCAACAACACAG...CTCTTCCAAGAGTGGCATCGAGTACAGCCGGACCATGTGATGTCGGCTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR TCA 90 bp CCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGGATAGTGGTGCTGCTTaGAGTCTCTGTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: PRMGMLCACPRCSVPEPVDSGAA*SLCFHR
Trigger: TCTATGAAAACAGAGACTTCAAGCAGCACCACTATC...CACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GGCTGGCTAGTGCAGAGCCCAGGTGCTGGATGTAGTCCAAAATCGTCCAGGGAGGATATCACGATACCATaGGTCTGGGTACTCGATGGG +
Preference number: 4 (lower is better)
Translates to: GWLVQSPGAGCSPKSSREDITIP*VWVLDG
Trigger: CCCATCGAGTACCCAGACTCATGGTATCGTGATATC...CTCCCTGGACGATTTTGGACTACATCCAGCACCTGGGCTCTGCACTAGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR TCA 90 bp CCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGAGCAGGGAGGGGAGCTaGAGAGCCTGTGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PCSEAPVPLRSSVSIILASREGS*RACGKE
Trigger: CTCTTTCCCACAGGCTCTTCAGCTCCCCTCCCTGCT...CGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGAGCAGGGAGGGGAGCTaGAGAGCCTGTGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: SIILAFLPCRRKSPPAFQSREGS*RACGKE
Trigger: CTCTTTCCCACAGGCTCTTCAGCTCCCCTCCCTGCT...CTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACAAGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCTGTCTGCAGGTAAATGGCTTTaGAGTGGTCCTGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: TRQMAALRPNVELSFLLSAGKWL*SGPGRW
Trigger: CCACCGCCCAGGACCACTGCAAAGCCATTTACCTGC...AGACAGGAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCTTCATAGAAGTTTATTaGTGTGTTGTTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: TMFCSRARVAPGLQLGQAFIEVY*CVVGGE
Trigger: CTCACCACCAACAACACAGCAATAAACTTCTATGAA...GGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCCTTTTCATAGAAGTTTATTaGTGTGTTGTTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GPAAGAGRRAQLDGWQLLFIEVY*CVVGGE
Trigger: CTCACCACCAACAACACAGCAATAAACTTCTATGAA...AAGGAGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACACTCTTGGAAGAGATaGCCGACCATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SSLAGESPLQLSRKELQEHSWKR*PTMAGS
Trigger: GCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTG...TTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGTCCGGCTGTACTCGATaGCACTCTTGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: QMSMAEPSRRLVPYPVGQSGCTR*HSWKRC
Trigger: GCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGA...CTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGCTGCTGTGGCGTACCTaGCACGGATGGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: GSCAFTVKCVHNTCVPPLLLWRT*HGWACS
Trigger: AGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG...CAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCTGTGTCCATAATACTTaGGTTCCTCCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: WAGSGRGRAIPFIAPPCSCVHNT*VPPLQE
Trigger: CTCCTGCAAGGGAGGAACGCAAGTATTATGGACACA...GGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTCAGCTTCCTCCTGTCTaGATGTGGCCAGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: IPFIAPPCSEAPVPLRSSQLPPV*MWPGLG
Trigger: TCCAAGGCCTGGCCACATGCAGACAGGAGGAAGCTG...ACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGCAAGCAGCATTTGGAATGCAGGGTGGAGAGGATGCTAGAAGTATGTGATGCACACAGGACTGCCCCCTaGCCACAAGGCCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: SKQHLECRVERMLEVCDAHRTAP*PQGQAL
Trigger: TAGGGCCTGGCCTTGTGGGCAGGGGGCAGTCCTGTG...TGCATCACATACTTCTAGCATCCTCTCCACCCTGCATTCCAAATGCTGCTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCTGCCTGGTGCCTaGCTTCATTCTGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: CSEAPVPLRSSVSIILAFLLPGA*LHSEGP
Trigger: GGGGCCCTCAGAATGAAGGCAGGCACCAGGCAGGAG...GAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAACGTCAAGGAGGGGGATaGTGCTCCTGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: IILAFLPCRRKSPPAFQERQGGG*CSCLVP
Trigger: AGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACG...TTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCCCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCAGTCGCCACACAGGTaGTTCACAGTGTCTATGTCA +
Preference number: 4 (lower is better)
Translates to: PPGFFGLVLEGDGPFPLLQSPHR*FTVSMS
Trigger: TGACATAGACACTGTGAAGCACCTGTGTGGCGACTG...CAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGTACAGCCTTTCTGTATaGGATTTTCTTTCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ALRMPTMFCSRARVAPGLYSLSV*DFLSSS
Trigger: GGAACTCGAAAGAAAATCGCATACAGAAAGGCTGTA...CAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424546.6
ENST00000572169.6
CDS-3UTR GCA 90 bp GACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCATACAGCCTTTCTGTATaGGATTTTCTTTCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: DSAVPTAPSGSAVLCAHPYSLSV*DFLSSS
Trigger: GGAACTCGAAAGAAAATCGCATACAGAAAGGCTGTA...TGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572169.6
CDS-3UTR GCA 90 bp ACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGCCATCCTGGAGGTGGAGGCTaGAGTGAGCCGAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: TQIKALMDPKSGAQPSCHPGGGG*SEPRLR
Trigger: GCGCAATCTCGGCTCACTGCAGCCTCCACCTCCAGG...ATGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649360.1
CDS-3UTR GCA 90 bp TGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCGTAGACTCTATGCCGTaGTTCCTGAACTCTTTCACG +
Preference number: 4 (lower is better)
Translates to: WRTCHGWACSAHAHDVLFVDSMP*FLNSFT
Trigger: CGTGAAAGAGTTCAGGAAGCACGGCATAGAGTCTAC...GAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572942.5
CDS-3UTR CCA 90 bp GGACCCAAGGAGTCTCGGCGATGCCTGTCCTCAGCAGGTCAGCTGAATGGAGCACTATCATTCCCACAATaGCACCTCTGTAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GPKESRRCLSSAGQLNGALSFPQ*HLCRLQ
Trigger: CTGCAACCTACAGAGGTGCCATTGTGGGAATGATAG...TGCTCCATTCAGCTGACCTGCTGAGGACAGGCATCGCCGAGACTCCTTGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCTATCATTCCCACAATaGCACCTCTGTAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: EEPATDGHALRMPTMFCSLSFPQ*HLCRLQ
Trigger: CTGCAACCTACAGAGGTGCCATTGTGGGAATGATAG...GGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
CDS-3UTR CCA 90 bp GCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGAGTGGTCCTGGGCGGTaGTTGATATGTGATCCTTTA +
Preference number: 4 (lower is better)
Translates to: AGSGRGRAIPFIAPPCSESGPGR*LICDPL
Trigger: TAAAGGATCACATATCAACCACCGCCCAGGACCACT...CTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp AATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACAGTGGTCCTGGGCGGTaGTTGATATGTGATCCTTTA +
Preference number: 4 (lower is better)
Translates to: NGACQGPTGSVTSQGTGNSGPGR*LICDPL
Trigger: TAAAGGATCACATATCAACCACCGCCCAGGACCACT...GTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAAGCAGGGGCTCAGGCTaGCTAGTGCAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: IILAFLPCRRKSPPAFQESRGSG*LVQSPG
Trigger: ACCTGGGCTCTGCACTAGCCAGCCTGAGCCCCTGCT...TTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTAGAGATGCCCGACCATaGCAGGAAGCTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: IPFIAPPCSEAPVPLRSSRDARP*QEAAEQ
Trigger: CTGCTCTGCAGCTTCCTGCCATGGTCGGGCATCTCT...ACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: LRSSLAGESPLQLSRKELAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...CAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTTCCAGAAGCAGGGAGGGGAGCTGAAGAGCCTTTGTGTCTGCTGTGGCGTACCGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: FPEAGRGAEEPLCLLWRTAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...GGTACGCCACAGCAGACACAAAGGCTCTTCAGCTCCCCTCCCTGCTTCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
CDS-3UTR CCA 90 bp ACAAGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCTGTCTTCTTTGGGCTGGTTCTaGAAGGGGACGGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: TRQMAALRPNVELSFLLSSLGWF*KGTGHS
Trigger: GGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGA...AGACAGGAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTCAGGCTTCTTTGGGCTaGTTCTGGAAGGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: PPCSEAPVPLRSSVSIILQASLG*FWKGTG
Trigger: GCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTG...AAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTTTCCAGGAAGGAGCTGCAAGAACAGGCAGCGGAGTGGGAGAGGCCCAGTGAGCAATCTGTTCAACACTaGGCTGGACACTGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: LSRKELQEQAAEWERPSEQSVQH*AGHCSD
Trigger: ATCACTGCAGTGTCCAGCCCAGTGTTGAACAGATTG...CTCACTGGGCCTCTCCCACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTCCAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAAGTCTGGGTACTCGATaGGGAACCAGTCGCCACACA +
Preference number: 4 (lower is better)
Translates to: VQNRPGRVAAVDVEDIGESLGTR*GTSRHT
Trigger: TGTGTGGCGACTGGTTCCCCATCGAGTACCCAGACT...TTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR CCA 90 bp ACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGCCATCCACACAGCTGGGCCTaGGTGCTCCAGGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: TQIKALMDPKSGAQPSCHPHSWA*VLQEHE
Trigger: CTCATGCTCCTGGAGCACCCAGGCCCAGCTGTGTGG...ATGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTTCTGTCATTCACACCTaGGAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LAFLPCRRKSPPAFQEGASVIHT*EAEAGE
Trigger: TTCTCCTGCCTCAGCCTCCCAGGTGTGAATGACAGA...AGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649360.1
CDS-3UTR TCA 90 bp TGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGGCGGTGGTTGATATGTaGTCCTTTAAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: CHGWACSAHAHDVLFPSPAVVDM*SFKLSS
Trigger: ACTTGAAAGTTTAAAGGATCACATATCAACCACCGC...CGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCGCGGTGGTTGATATGTaGTCCTTTAAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: HALRMPTMFCSRARVAPGAVVDM*SFKLSS
Trigger: ACTTGAAAGTTTAAAGGATCACATATCAACCACCGC...GCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp AAGGTGGTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCGGTGGTTGATATGTaGTCCTTTAAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: KVVDSAVPTAPSGSAVLCAVVDM*SFKLSS
Trigger: ACTTGAAAGTTTAAAGGATCACATATCAACCACCGC...ACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCACCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGCCCTGTGTTGTTGGTGGTaGGGACATGCAGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: QNRPGRVAAVDVEDIGEALCCWW*GHAGKW
Trigger: CCATTTACCTGCATGTCCTCACCACCAACAACACAG...GGCTTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR TCA 90 bp TGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGATAGTGGTGCTGCTTaGAGTCTCTGTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: WACSAHAHDVLFPSPCSTDSGAA*SLCFHR
Trigger: TCTATGAAAACAGAGACTTCAAGCAGCACCACTATC...GGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CAGCTGAATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGAAATAGAAATCACATaGTCGCCACTGATTCGCAGT +
Preference number: 4 (lower is better)
Translates to: QLNGACQGPTGSVTSQGTEIEIT*SPLIRS
Trigger: ACTGCGAATCAGTGGCGATCATGTGATTTCTATTTC...AGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATTCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGGGCAGGAGAATCGTTTaGACCCTGGAGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GSCAFTVKCVHNTCVPPLGRRIV*TLEVEA
Trigger: AGCCTCCACCTCCAGGGTTCAAACGATTCTCCTGCC...CAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649360.1
CDS-3UTR GCA 90 bp GTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAGGGAACCTATGCCGTaGTTCCTGAACTCTTTCACG +
Preference number: 4 (lower is better)
Translates to: VPPLQEKVPSSFPGRSCKREPMP*FLNSFT
Trigger: CGTGAAAGAGTTCAGGAAGCACGGCATAGGTTCCCT...CTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGTTCATAGAAGTTTATTaGTGTGTTGTTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLFIEVY*CVVGGE
Trigger: CTCACCACCAACAACACAGCAATAAACTTCTATGAA...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTCGTAATGAGACAGAACGCTACAATCTGTTCAACACTGGGCTGGACACTGCAGACCATGGCAGGAAGCTaGAGAGCAGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LVMRQNATICSTLGWTLQTMAGS*RAGCGP
Trigger: AGGCCCACAGCCTGCTCTGCAGCTTCCTGCCATGGT...CTGCAGTGTCCAGCCCAGTGTTGAACAGATTGTAGCGTTCTGTCTCATTACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000575076.5
CDS-3UTR GCA 90 bp CCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAATCCGGCTGTACTCGATaGCACTCTTGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: PFPLLRPLVPRLLCLYGQSGCTR*HSWKRC
Trigger: GCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGA...TTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCTGCCACGGATGGGCATaGTCTGCGCATGCCCACGAT +
Preference number: 4 (lower is better)
Translates to: CSEAPVPLRSSVSIILAFCHGWA*SAHAHD
Trigger: ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCA...GAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AGCAAGCAGCATTTGGAATGCAGGGTGGAGAGGATGCTAGAAGTATGTGATGCAGCCCCTCCCAGTGAATaGAGCCACACTGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SKQHLECRVERMLEVCDAAPPSE*SHTGSA
Trigger: GGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC...TGCATCACATACTTCTAGCATCCTCTCCACCCTGCATTCCAAATGCTGCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACATTTCCAGGAAGGAGCTaGAAGAACAGGCAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: LPCRRKSPPAFQEGAARTFPGRS*KNRQRS
Trigger: ACTCCGCTGCCTGTTCTTGCAGCTCCTTCCTGGAAA...TGTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGTGTGTCCATAATACTTaGGTTCCTCCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSSHTFVSAVAYLPRMGMCVHNT*VPPLQE
Trigger: CTCCTGCAAGGGAGGAACGCAAGTATTATGGACACA...CATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAAGTTCCGAGGCTCCTGTaGCTTTACGGTCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SSLAGESPLQLSRKELQEVPRLL*LYGQVC
Trigger: ACACACTTGACCGTAAAGGCACAGGAGCCTCGGAAC...TTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACAGTTCCGAGGCTCCTGTaGCTTTACGGTCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LPCRRKSPPAFQEGAARTVPRLL*LYGQVC
Trigger: ACACACTTGACCGTAAAGGCACAGGAGCCTCGGAAC...TGTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGCAGGGCACTGGTAACTaGACGGAAGGTGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SIILAFLPCRRKSPPAFQQGTGN*TEGAEE
Trigger: CTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTG...CTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGAAGGAGTCTCGGCGATaGCTGTCCTCAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GSCAFTVKCVHNTCVPPLKESRR*LSSAGQ
Trigger: CTGACCTGCTGAGGACAGGCATCGCCGAGACTCCTT...CAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCACTATCATTCCCACAATaGCACCTCTGTAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: HQAPIPLCLLWRTCHGWALSFPQ*HLCRLQ
Trigger: CTGCAACCTACAGAGGTGCCATTGTGGGAATGATAG...TGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTAGTCCAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGGACATGCAGGTAAATaGCTTTGCAGTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VVQNRPGRVAAVDVEDIGGHAGK*LCSGPG
Trigger: CCCAGGACCACTGCAAAGCCATTTACCTGCATGTCC...ACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTGGACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR CCA 90 bp AGCAAGCAGCATTTGGAATGCAGGGTGGAGAGGATGCTAGAAGTATGTGATGCAAGCAGGGGCTCAGGCTaGCTAGTGCAGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SKQHLECRVERMLEVCDASRGSG*LVQSPG
Trigger: ACCTGGGCTCTGCACTAGCCAGCCTGAGCCCCTGCT...TGCATCACATACTTCTAGCATCCTCTCCACCCTGCATTCCAAATGCTGCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACAACTCGATGCCACTCTTaGAAGAGATGCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: LPCRRKSPPAFQEGAARTTRCHS*KRCPTM
Trigger: CATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGT...TGTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTCCAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAACTCGATGCCACTCTTaGAAGAGATGCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: VQNRPGRVAAVDVEDIGETRCHS*KRCPTM
Trigger: CATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGT...TTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR CCA 90 bp TCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGCCAGCCGACATCACATaGTCCGGCTGTACTCGATGC +
Preference number: 4 (lower is better)
Translates to: SIILAFLPCRRKSPPAFQPADIT*SGCTRC
Trigger: GCATCGAGTACAGCCGGACCATGTGATGTCGGCTGG...CTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: AFHFCGWRHQAPIPLCLLAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...CAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTAAGCAGGTCAGCTGAATaGAGCATGCCAAGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: TFVAGGTKLPYLCVCCGVSRSAE*SMPRSD
Trigger: GTCGGACCTTGGCATGCTCCATTCAGCTGACCTGCT...TACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTCGTAATGAGACAGAACGCTACAATCTGTTCAACACTGGGCTGGACACTGCAGCCTCCTGTCTGCATGTaGCCAGGCCTTGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LVMRQNATICSTLGWTLQPPVCM*PGLGAA
Trigger: TGCTGCTCCAAGGCCTGGCCACATGCAGACAGGAGG...CTGCAGTGTCCAGCCCAGTGTTGAACAGATTGTAGCGTTCTGTCTCATTACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000575076.5
CDS-3UTR CCA 90 bp TCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGCATTCTGAGGGCCCCTaGCCCCAGCTGAGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: SIILAFLPCRRKSPPAFQHSEGP*PQLSSR
Trigger: TCTTGAACTCAGCTGGGGCCAGGGGCCCTCAGAATG...CTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TGTCTGCCTGCAGCCACTAGGCGCCTCTCGGTCCCCACACAAATAAAGGCACTGTCGTCCCTTACCCTGTaGGGCAGAAATAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: CLPAATRRLSVPTQIKALSSLTL*GRNRNH
Trigger: GTGATTTCTATTTCTGCCCCACAGGGTAAGGGACGA...CAGTGCCTTTATTTGTGTGGGGACCGAGAGGCGCCTAGTGGCTGCAGGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACATTACGTCCCCCTaGGGTCACCCTAAGACTCTA +
Preference number: 4 (lower is better)
Translates to: VPPLQEKVPSSFPGRSCKNITSP*GHPKTL
Trigger: TAGAGTCTTAGGGTGACCCCAGGGGGACGTAATGTT...CTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000572169.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGGTGTCTATGTCATCGTaGCAGAGGAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSCAFTVKCVHNTCVPPLVSMSS*QRRRRL
Trigger: CAGCCTGCGCCTCCTCTGCCACGATGACATAGACAC...CAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCAAGTAAGAGGGAACCTATGCCGTGCTTCCTGAACTCTTTCACGACGCCCAGAGTGTCTATGTCATCGTaGCAGAGGAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSKREPMPCFLNSFTTPRVSMSS*QRRRRL
Trigger: CAGCCTGCGCCTCCTCTGCCACGATGACATAGACAC...TCTGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAGGTTCCCTCTTACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573345.5
CDS-3UTR CCA 90 bp GTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGTTCCACTTTTGTGGCTaGAGGCACCAAGCTCCCATA +
Preference number: 4 (lower is better)
Translates to: VPPLQEKVPSSFPGRSCKFHFCG*RHQAPI
Trigger: TATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAA...CTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTTCCACTTTTGTGGCTaGAGGCACCAAGCTCCCATA +
Preference number: 4 (lower is better)
Translates to: GPSTFVAGGTKLPYLCVCFHFCG*RHQAPI
Trigger: TATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAA...GCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GTGTCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCA +
Preference number: 4 (lower is better)
Translates to: VSIILAFLPCRRKSPPAFLCRAS*TLSRRP
Trigger: TGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAG...GAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCGCGGTGGTTGATATGTaGTCCTTTAAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: GVPATDGHALRMPTMFCSAVVDM*SFKLSS
Trigger: ACTTGAAAGTTTAAAGGATCACATATCAACCACCGC...GGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CAGGGTGGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTATGCGCGGTGGTTGATATGTaGTCCTTTAAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: QGGAARTLCHGFVTLQLCAVVDM*SFKLSS
Trigger: ACTTGAAAGTTTAAAGGATCACATATCAACCACCGC...GCATAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCCACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACTGTGTTGTTGGTGGTaGGGACATGCAGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: SSLAGESPLQLSRKELQELCCWW*GHAGKW
Trigger: CCATTTACCTGCATGTCCTCACCACCAACAACACAG...TTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCGATAGTGGTGCTGCTTaGAGTCTCTGTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: FWKGTGHSLYCAPLFRGSDSGAA*SLCFHR
Trigger: TCTATGAAAACAGAGACTTCAAGCAGCACCACTATC...GGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GCTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTGATAGTGGTGCTGCTTaGAGTCTCTGTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: AEEPATDGHALRMPTMFCDSGAA*SLCFHR
Trigger: TCTATGAAAACAGAGACTTCAAGCAGCACCACTATC...ACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000575076.5
CDS-3UTR TCA 90 bp ACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGCCATGGGACAGATGGCAGCCTTaGGGCCTAATGTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: TNKGTDGSKVGCTAQLPWDRWQP*GLMSSS
Trigger: TGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTC...CCATGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp ATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGATGCTAGAAGTATGTaGTGCACCTGCGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: IPFIAPPCSEAPVPLRSSDARSM*CTCGTD
Trigger: GTCAGTGCCGCAGGTGCATCACATACTTCTAGCATC...ACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTCTGCCATGGCTTTGTaGCACTGCAGCTATGCTGGG +
Preference number: 4 (lower is better)
Translates to: PCSEAPVPLRSSVSIILASAMAL*HCSYAG
Trigger: CCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGA...CGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GTGTCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCTCTGCCATGGCTTTGTaGCACTGCAGCTATGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSIILAFLPCRRKSPPAFSAMAL*HCSYAG
Trigger: CCCAGCATAGCTGCAGTGTCACAAAGCCATGGCAGA...GAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp TGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAAATAGAAATCACATaGTCGCCACTGATTCGCAGT +
Preference number: 4 (lower is better)
Translates to: WAGSGRGRAIPFIAPPCSEIEIT*SPLIRS
Trigger: ACTGCGAATCAGTGGCGATCATGTGATTTCTATTTC...GGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp TCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCATTCATAGAAGTTTATTaGTGTGTTGTTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SAHAHDVLFPSPCSTGPAFIEVY*CVVGGE
Trigger: CTCACCACCAACAACACAGCAATAAACTTCTATGAA...TGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGCCATGGCACTCTTGGAAGAGATaGCCGACCATGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TNKGTDGSKVGCTAQLPWHSWKR*PTMAGS
Trigger: GCTTCCTGCCATGGTCGGGCATCTCTTCCAAGAGTG...CCATGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGAAATAGACAGTCGCCACACAGGTaGTTCACAGTGTCTATGTCA +
Preference number: 4 (lower is better)
Translates to: PWQSLPEDSSLTLWGRNRQSPHR*FTVSMS
Trigger: TGACATAGACACTGTGAAGCACCTGTGTGGCGACTG...TCTATTTCTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGCCCATACCTTTGTGTCTaGTGTGGCGTACCTGCCACG +
Preference number: 4 (lower is better)
Translates to: APVPLRSSVSIILAFLPCPYLCV*CGVPAT
Trigger: CGTGGCAGGTACGCCACAGCAGACACAAAGGTATGG...GCAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGCCATCTTTGAGGACCTATCATTCCCACAATaGCACCTCTGTAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GRVAAVDVEDIGEAIFEDLSFPQ*HLCRLQ
Trigger: CTGCAACCTACAGAGGTGCCATTGTGGGAATGATAG...GTCCTCAAAGATGGCTTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR CCA 90 bp GCAGCCACTAGGCGCCTCTCGGTCCCCACACAAATAAAGGCACTGATGGATCCAAGTGGTCCTGGGCGGTaGTTGATATGTGATCCTTTA +
Preference number: 4 (lower is better)
Translates to: AATRRLSVPTQIKALMDPSGPGR*LICDPL
Trigger: TAAAGGATCACATATCAACCACCGCCCAGGACCACT...TGGATCCATCAGTGCCTTTATTTGTGTGGGGACCGAGAGGCGCCTAGTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TCAGGCTGGCTAGTGCAGAGCCCAGGTGCTGGATGTAGTCCAAAATCGTCCAGGAGTGGTCCTGGGCGGTaGTTGATATGTGATCCTTTA +
Preference number: 4 (lower is better)
Translates to: SGWLVQSPGAGCSPKSSRSGPGR*LICDPL
Trigger: TAAAGGATCACATATCAACCACCGCCCAGGACCACT...CCTGGACGATTTTGGACTACATCCAGCACCTGGGCTCTGCACTAGCCAGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR CCA 90 bp GGCCCTACAAGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCAGTGGTCCTGGGCGGTaGTTGATATGTGATCCTTTA +
Preference number: 4 (lower is better)
Translates to: GPTRQMAALRPNVELSFLSGPGR*LICDPL
Trigger: TAAAGGATCACATATCAACCACCGCCCAGGACCACT...GAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCTTGTAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAACCAGCCGACATCACATaGTCCGGCTGTACTCGATGC +
Preference number: 4 (lower is better)
Translates to: IILAFLPCRRKSPPAFQEPADIT*SGCTRC
Trigger: GCATCGAGTACAGCCGGACCATGTGATGTCGGCTGG...TTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTAGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: TFVAGGTKLPYLCVCCGVAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...TACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCCAATCTGTTCAACACTaGGCTGGACACTGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: TCVPPLQEKVPSSFPGRSQSVQH*AGHCSD
Trigger: ATCACTGCAGTGTCCAGCCCAGTGTTGAACAGATTG...GCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCCCTACAAGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCGTCATTCACACTCTCTaGAGCTCTTCTCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: GPTRQMAALRPNVELSFLVIHTL*SSSPNS
Trigger: TGAGTTGGGAGAAGAGCTCCAGAGAGTGTGAATGAC...GAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCTTGTAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407558.9
ENST00000649205.1
CDS-3UTR TCA 90 bp CGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGGCGGTGGTTGATATGTaGTCCTTTAAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: RAIPFIAPPCSEAPVPLRAVVDM*SFKLSS
Trigger: ACTTGAAAGTTTAAAGGATCACATATCAACCACCGC...CCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTGCGGTGGTTGATATGTaGTCCTTTAAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: VAYLPRMGMLCACPRCSVAVVDM*SFKLSS
Trigger: ACTTGAAAGTTTAAAGGATCACATATCAACCACCGC...AACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCGATAGTGGTGCTGCTTaGAGTCTCTGTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: QAPIPLCLLWRTCHGWACDSGAA*SLCFHR
Trigger: TCTATGAAAACAGAGACTTCAAGCAGCACCACTATC...GCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAAAGAGCCTTTGTGTCTaGTGTGGCGTACCTGCCACG +
Preference number: 4 (lower is better)
Translates to: IILAFLPCRRKSPPAFQEKSLCV*CGVPAT
Trigger: CGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTT...TTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572942.5
CDS-3UTR GCA 90 bp ATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTCAGTCGCCACACAGGTaGTTCACAGTGTCTATGTCA +
Preference number: 4 (lower is better)
Translates to: IPFIAPPCSEAPVPLRSSQSPHR*FTVSMS
Trigger: TGACATAGACACTGTGAAGCACCTGTGTGGCGACTG...ACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAACACTATCATTCCCACAATaGCACCTCTGTAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LPCRRKSPPAFQEGAARTLSFPQ*HLCRLQ
Trigger: CTGCAACCTACAGAGGTGCCATTGTGGGAATGATAG...TGTTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGCCAGGACATGCAGGTAAATaGCTTTGCAGTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HTNKGTDGSKVGCTAQLPGHAGK*LCSGPG
Trigger: CCCAGGACCACTGCAAAGCCATTTACCTGCATGTCC...TGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGACTCGATGCCACTCTTaGAAGAGATGCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: GSCAFTVKCVHNTCVPPLTRCHS*KRCPTM
Trigger: CATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGT...CAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGGCCCAGTTAGATGGCTaGCAGCTCCTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: GSCAFTVKCVHNTCVPPLAQLDG*QLLAEN
Trigger: GTTTTCTGCAAGGAGCTGCCAGCCATCTAACTGGGC...CAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp TTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTCGTCCCTTACCCTGTaGGGCAGAAATAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: FPLLRPLVPRLLCLYGQVSSLTL*GRNRNH
Trigger: GTGATTTCTATTTCTGCCCCACAGGGTAAGGGACGA...CACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTAACATTACGTCCCCCTaGGGTCACCCTAAGACTCTA +
Preference number: 4 (lower is better)
Translates to: APLFRGSCAFTVKCVHNTNITSP*GHPKTL
Trigger: TAGAGTCTTAGGGTGACCCCAGGGGGACGTAATGTT...AGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000572169.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GTTGATGTAGAGGACATAGGTGAAGCCATCTTTGAGGACCCCTCGAATGGAGTAGTGTCTATGTCATCGTaGCAGAGGAGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VDVEDIGEAIFEDPSNGVVSMSS*QRRRRL
Trigger: CAGCCTGCGCCTCCTCTGCCACGATGACATAGACAC...TACTCCATTCGAGGGGTCCTCAAAGATGGCTTCACCTATGTCCTCTACATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR CCA 90 bp AGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGAAATAGAAATCACATGAGTCTGGGTACTCGATaGGGAACCAGTCGCCACACA +
Preference number: 4 (lower is better)
Translates to: SLPEDSSLTLWGRNRNHMSLGTR*GTSRHT
Trigger: TGTGTGGCGACTGGTTCCCCATCGAGTACCCAGACT...CATGTGATTTCTATTTCTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp CTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGTTCCACTTTTGTGGCTaGAGGCACCAAGCTCCCATA +
Preference number: 4 (lower is better)
Translates to: LPLLWLEAPSSHTFVSAVFHFCG*RHQAPI
Trigger: TATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAA...CACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGACTTCTTGTTGGATGTaGTATCACGATACCATGAGT +
Preference number: 4 (lower is better)
Translates to: PRLLWAGSGRGRAIPFIATSCWM*YHDTMS
Trigger: ACTCATGGTATCGTGATATCACATCCAACAAGAAGT...CGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCCCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGGCGGTGGTTGATATGTaGTCCTTTAAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: PPGFFGLVLEGDGPFPLLAVVDM*SFKLSS
Trigger: ACTTGAAAGTTTAAAGGATCACATATCAACCACCGC...CAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGCCGATAGTGGTGCTGCTTaGAGTCTCTGTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: QNRPGRVAAVDVEDIGEADSGAA*SLCFHR
Trigger: TCTATGAAAACAGAGACTTCAAGCAGCACCACTATC...GGCTTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR TCA 90 bp GGACAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGGATAGTGGTGCTGCTTaGAGTCTCTGTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: GQMSMAEPSRRLVPYPVGDSGAA*SLCFHR
Trigger: TCTATGAAAACAGAGACTTCAAGCAGCACCACTATC...CCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGAAATAGAAATCACATaGTCGCCACTGATTCGCAGT +
Preference number: 4 (lower is better)
Translates to: LAFLPCRRKSPPAFQEGAEIEIT*SPLIRS
Trigger: ACTGCGAATCAGTGGCGATCATGTGATTTCTATTTC...AGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGGATATCACGATACCATaGGTCTGGGTACTCGATGGG +
Preference number: 4 (lower is better)
Translates to: GSCAFTVKCVHNTCVPPLDITIP*VWVLDG
Trigger: CCCATCGAGTACCCAGACTCATGGTATCGTGATATC...CAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp AAACTTTCAAGTAAGAGGGAACCTATGCCGTGCTTCCTGAACTCTTTCACGACGGCAGGTAAATGGCTTTaGAGTGGTCCTGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: KLSSKREPMPCFLNSFTTAGKWL*SGPGRW
Trigger: CCACCGCCCAGGACCACTGCAAAGCCATTTACCTGC...CGTCGTGAAAGAGTTCAGGAAGCACGGCATAGGTTCCCTCTTACTTGAAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573345.5
CDS-3UTR GCA 90 bp GTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCTTCATAGAAGTTTATTaGTGTGTTGTTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: VAGGTKLPYLCVCCGVPAFIEVY*CVVGGE
Trigger: CTCACCACCAACAACACAGCAATAAACTTCTATGAA...GGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp ACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGCCATTCCGGCTGTACTCGATaGCACTCTTGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: TQIKALMDPKSGAQPSCHSGCTR*HSWKRC
Trigger: GCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGA...ATGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GTCCCCACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGTGTCCATAATACTTaGGTTCCTCCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VPTQIKALMDPKSGAQPSCVHNT*VPPLQE
Trigger: CTCCTGCAAGGGAGGAACGCAAGTATTATGGACACA...ACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGTGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp GCCGTTGATGTAGAGGACATAGGTGAAGCCATCTTTGAGGACCCCTCGAATGGACAGTCGCCACACAGGTaGTTCACAGTGTCTATGTCA +
Preference number: 4 (lower is better)
Translates to: AVDVEDIGEAIFEDPSNGQSPHR*FTVSMS
Trigger: TGACATAGACACTGTGAAGCACCTGTGTGGCGACTG...TCCATTCGAGGGGTCCTCAAAGATGGCTTCACCTATGTCCTCTACATCAACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR CCA 90 bp ATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTCATTCACACTCTCTaGAGCTCTTCTCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: IPFIAPPCSEAPVPLRSSVIHTL*SSSPNS
Trigger: TGAGTTGGGAGAAGAGCTCCAGAGAGTGTGAATGAC...ACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000572169.6
ENST00000649205.1
CDS-3UTR CCA 90 bp TTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCAGCTGGATGTAGTCCGTaGGGCTCTCTTTATGTATTT +
Preference number: 4 (lower is better)
Translates to: LLRPLVPRLLCLYGQVCPAGCSP*GSLYVF
Trigger: AAATACATAAAGAGAGCCCCACGGACTACATCCAGC...TGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576916.5
CDS-3UTR TCA 90 bp CAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGGCGGTGGTTGATATGTaGTCCTTTAAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: QMSMAEPSRRLVPYPVGQAVVDM*SFKLSS
Trigger: ACTTGAAAGTTTAAAGGATCACATATCAACCACCGC...CTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGGATAGTGGTGCTGCTTaGAGTCTCTGTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: AFHFCGWRHQAPIPLCLLDSGAA*SLCFHR
Trigger: TCTATGAAAACAGAGACTTCAAGCAGCACCACTATC...CAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CTCGGTCCCCACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCGATAGTGGTGCTGCTTaGAGTCTCTGTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: LGPHTNKGTDGSKVGCTADSGAA*SLCFHR
Trigger: TCTATGAAAACAGAGACTTCAAGCAGCACCACTATC...GGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGTGGGGACCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp CCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGAAATAGAAATCACATaGTCGCCACTGATTCGCAGT +
Preference number: 4 (lower is better)
Translates to: PFPLLRPLVPRLLCLYGQEIEIT*SPLIRS
Trigger: ACTGCGAATCAGTGGCGATCATGTGATTTCTATTTC...TTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CCCCCAGGCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGTTCATAGAAGTTTATTaGTGTGTTGTTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PPGFFGLVLEGDGPFPLLFIEVY*CVVGGE
Trigger: CTCACCACCAACAACACAGCAATAAACTTCTATGAA...CAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGCCTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTGCCCAGCCGACATCACATGGTCCGGCTGTACTCGATGCCACTCTTGGAAGAGTTCATAGAAGTTTATTaGTGTGTTGTTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LPSRHHMVRLYSMPLLEEFIEVY*CVVGGE
Trigger: CTCACCACCAACAACACAGCAATAAACTTCTATGAA...CTCTTCCAAGAGTGGCATCGAGTACAGCCGGACCATGTGATGTCGGCTGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR GCA 90 bp CTAGTGCAGAGCCCAGGTGCTGGATGTAGTCCAAAATCGTCCAGGGAGGGTGGCTTCATAGAAGTTTATTaGTGTGTTGTTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LVQSPGAGCSPKSSREGGFIEVY*CVVGGE
Trigger: CTCACCACCAACAACACAGCAATAAACTTCTATGAA...GCCACCCTCCCTGGACGATTTTGGACTACATCCAGCACCTGGGCTCTGCACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR GCA 90 bp GTGTCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCTGTGTCCATAATACTTaGGTTCCTCCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VSIILAFLPCRRKSPPAFCVHNT*VPPLQE
Trigger: CTCCTGCAAGGGAGGAACGCAAGTATTATGGACACA...GAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp GGCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGCTATCATTCCCACAATaGCACCTCTGTAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GSCAFTVKCVHNTCVPPLLSFPQ*HLCRLQ
Trigger: CTGCAACCTACAGAGGTGCCATTGTGGGAATGATAG...CAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CCA 90 bp ACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGCCATGGAGTGGTCCTGGGCGGTaGTTGATATGTGATCCTTTA +
Preference number: 4 (lower is better)
Translates to: TNKGTDGSKVGCTAQLPWSGPGR*LICDPL
Trigger: TAAAGGATCACATATCAACCACCGCCCAGGACCACT...CCATGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAATTCATAGAAGTTTATTaGTGTGTTGTTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: RSSLAGESPLQLSRKELQFIEVY*CVVGGE
Trigger: CTCACCACCAACAACACAGCAATAAACTTCTATGAA...TTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR GCA 90 bp CTCGTAATGAGACAGAACGCTACAATCTGTTCAACACTGGGCTGGACACTGCAGTGTGTCCATAATACTTaGGTTCCTCCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LVMRQNATICSTLGWTLQCVHNT*VPPLQE
Trigger: CTCCTGCAAGGGAGGAACGCAAGTATTATGGACACA...CTGCAGTGTCCAGCCCAGTGTTGAACAGATTGTAGCGTTCTGTCTCATTACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000575076.5
CDS-3UTR GCA 90 bp ATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGCCATGGAGCCTTCATAGAAGTTTATTaGTGTGTTGTTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: IKALMDPKSGAQPSCHGAFIEVY*CVVGGE
Trigger: CTCACCACCAACAACACAGCAATAAACTTCTATGAA...GGCTCCATGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp AGTAAGAGGGAACCTATGCCGTGCTTCCTGAACTCTTTCACGACGCCCAGACTTGCGGTGGTTGATATGTaGTCCTTTAAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: SKREPMPCFLNSFTTPRLAVVDM*SFKLSS
Trigger: ACTTGAAAGTTTAAAGGATCACATATCAACCACCGC...AAGTCTGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAGGTTCCCTCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573345.5
CDS-3UTR TCA 90 bp CACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGCCAGCGGTGGTTGATATGTaGTCCTTTAAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: HTNKGTDGSKVGCTAQLPAVVDM*SFKLSS
Trigger: ACTTGAAAGTTTAAAGGATCACATATCAACCACCGC...TGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp ACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGCCATGAAATAGAAATCACATaGTCGCCACTGATTCGCAGT +
Preference number: 4 (lower is better)
Translates to: TQIKALMDPKSGAQPSCHEIEIT*SPLIRS
Trigger: ACTGCGAATCAGTGGCGATCATGTGATTTCTATTTC...ATGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR TCA 90 bp GTTGATGTAGAGGACATAGGTGAAGCCATCTTTGAGGACCCCTCGAATGGAGTAGATAGTGGTGCTGCTTaGAGTCTCTGTTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: VDVEDIGEAIFEDPSNGVDSGAA*SLCFHR
Trigger: TCTATGAAAACAGAGACTTCAAGCAGCACCACTATC...TACTCCATTCGAGGGGTCCTCAAAGATGGCTTCACCTATGTCCTCTACATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR GCA 90 bp ACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGCCATTTCATAGAAGTTTATTaGTGTGTTGTTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: TQIKALMDPKSGAQPSCHFIEVY*CVVGGE
Trigger: CTCACCACCAACAACACAGCAATAAACTTCTATGAA...ATGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS CCA 90 bp GGGGAGCCGGCGGCCGCTGGGGGTGTTGTAGGGCTCAGCGCATCCTaGAGGCGAAGGGAGCCGGGAAGTGGGACCGCGCGGAGCCCGCAA +
Preference number: 5 (lower is better)
Translates to: GEPAAAGGVVGLSAS*RRREPGSGTARSPQ
Trigger: TTGCGGGCTCCGCGCGGTCCCACTTCCCGGCTCCCTTCGCCTCCAGGATGCGCTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000570551.5
ENST00000571107.5
ENST00000571696.6
ENST00000572131.5
ENST00000572584.2
ENST00000572739.5
ENST00000572942.5
ENST00000573345.5
ENST00000574380.5
ENST00000575076.5
ENST00000576787.5
ENST00000576916.5
ENST00000577013.6
CDS CCA 90 bp GGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGGTaGCGGCTGCCCAGCCGACATCACATGGTCCGGCTGTACTCGATG +
Preference number: 5 (lower is better)
Translates to: GQEGGLCGRPKGGAW*RLPSRHHMVRLYSM
Trigger: CATCGAGTACAGCCGGACCATGTGATGTCGGCTGGGCAGCCGCCACCAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570551.5
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000575754.1
ENST00000576819.1
ENST00000576916.5
ENST00000577013.6
ENST00000648681.1
ENST00000649205.1
ENST00000649360.1
CDS CCA 90 bp ATCGTGGCAGAGGAGGCGCAGGCTGACCTCGCTGAGCGCGCTGGATaGCACCACCTCTGTCATTCACACCTCGTGGGGGAGCCGGCGGCC +
Preference number: 5 (lower is better)
Translates to: IVAEEAQADLAERAG*HHLCHSHLVGEPAA
Trigger: GGCCGCCGGCTCCCCCACGAGGTGTGAATGACAGAGGTGGTGCCATCCAGCGCGCTCAGCGAGGTCAGCCTGCGCCTCCTCTGCCACGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000571107.5
ENST00000572584.2
ENST00000572739.5
ENST00000572942.5
ENST00000573345.5
ENST00000575076.5
ENST00000576916.5
ENST00000648681.1
CDS-3UTR CAA 90 bp GGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGGCAGGGCCTTCCACTTTaGTGGCTGGAGGCACCAAGC +
Preference number: 5 (lower is better)
Translates to: GSDGQEGGLCGRPKGGAWQGLPL*WLEAPS
Trigger: GCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCTG...CCAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS CCA 90 bp CACGCTCGCCAGGGCACAGTCATCAGGGGCCCGCGCAGTGGCCTGTaGGACTGTGTGCAGATGGCAAGCCAGGCTTCGGAGGCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: HARQGTVIRGPRSGL*DCVQMASQASEAES
Trigger: GCTCTCAGCCTCCGAAGCCTGGCTTGCCATCTGCACACAGTCCCACAGGCCACTGCGCGGGCCCCTGATGACTGTGCCCTGGCGAGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648681.1
CDS CCA 90 bp TGTTGTAGGGCTCAGCGCATCCTGGAGGCGAAGGGAGCCGGGAAGTaGGACCGCGCGGAGCCCGCAACGAGTTATGTAACCGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: CCRAQRILEAKGAGK*DRAEPATSYVTGRG
Trigger: GCCCCTGCCGGTTACATAACTCGTTGCGGGCTCCGCGCGGTCCCACTTCCCGGCTCCCTTCGCCTCCAGGATGCGCTGAGCCCTACAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000571107.5
ENST00000572584.2
ENST00000577013.6
CDS-3UTR CAA 90 bp GGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGGGGCCATTCCCTTTATaGCGCCCCCTTGTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: GQAPPSECSHTGSALGTVGPFPL*RPLVPR
Trigger: CCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCC...CACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCCAGGGCCTTCCACTTTaGTGGCTGGAGGCACCAAGC +
Preference number: 5 (lower is better)
Translates to: GRPLPVNAATLGQPWGRCQGLPL*WLEAPS
Trigger: GCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCTG...GCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS CCA 90 bp TGGATGCTAGAATATCTCCATCCTCGTGGGGGAGCCGGCGGCCGCTaGGGGTGTTGTAGGGCTCAGCGCATCCTGGAGGCGAAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: WMLEYLHPRGGAGGR*GCCRAQRILEAKGA
Trigger: GGCTCCCTTCGCCTCCAGGATGCGCTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCCCCCACGAGGATGGAGATATTCTAGCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570551.5
ENST00000574380.5
CDS-3UTR CAA 90 bp ACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCCTTTATTGCGCCCCCTaGTTCCGAGGCTCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: TMFCSRARVAPGLQLGQALYCAP*FRGSCA
Trigger: GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG...GGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp ATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACCTTTATTGCGCCCCCTaGTTCCGAGGCTCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: MFCSRARVAPGLQLGQADLYCAP*FRGSCA
Trigger: GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG...GTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGGGCCTTCCAGGGCCATTCCCTTTATaGCGCCCCCTTGTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: SPRPLPALPFSVPIQGLPGPFPL*RPLVPR
Trigger: CCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCC...TGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGAGGGCCATTCCCTTTATaGCGCCCCCTTGTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: DVLFPSPCSTGPAAGAGRGPFPL*RPLVPR
Trigger: CCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCC...TCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGGGCCATTCCCTTTATaGCGCCCCCTTGTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQGPFPL*RPLVPR
Trigger: CCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCC...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS CCA 90 bp ATCGTGGCAGAGGAGGCGCAGGCTGACCTCGCTGAGCGCGCTGGATaGCACCACCTCTGTCATTCACACCTGGTAAGGGGGCCCATGGGT +
Preference number: 5 (lower is better)
Translates to: IVAEEAQADLAERAG*HHLCHSHLVRGPMG
Trigger: ACCCATGGGCCCCCTTACCAGGTGTGAATGACAGAGGTGGTGCCATCCAGCGCGCTCAGCGAGGTCAGCCTGCGCCTCCTCTGCCACGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572131.5
CDS-3UTR CAA 90 bp GCAGCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGGAGCTGAAGAGCCTTaGTGTCTGCTGTGGCGTACC +
Preference number: 5 (lower is better)
Translates to: AALEAEGHRSLRPRLPRVGAEEP*CLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGCTCTTCAGCTCC...AACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360862.9
ENST00000414063.6
CDS-3UTR CAA 90 bp ATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCTTTATTGCGCCCCCTaGTTCCGAGGCTCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: MPTMFCSRARVAPGLQLGLYCAP*FRGSCA
Trigger: GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG...CCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGCTTTATTGCGCCCCCTaGTTCCGAGGCTCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLLYCAP*FRGSCA
Trigger: GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GAGCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCACCCCTGGGCCATTCCCTTTATaGCGCCCCCTTGTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: EPQSSVLARKASPRLPTPGPFPL*RPLVPR
Trigger: CCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCC...AGGGGTGGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GTCAGCATGGCGCGGCCCTCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCAGACAGATGGCAGCCTaGAGGCCTAATGTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: VSMARPSCQHRQGGGCCSRQMAA*RPNVEL
Trigger: GAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCT...GGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCATGCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGGGCCTCAAGCTCCCATACCTTaGTGTCTGCTGTGGCGTACC +
Preference number: 5 (lower is better)
Translates to: AVPTAPSGSAVLCAHPGPQAPIP*CLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGTATGGGAGCTTG...AGGCCCTGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGGGCCTTCCACTTTaGTGGCTGGAGGCACCAAGC +
Preference number: 5 (lower is better)
Translates to: ALRMPTMFCSRARVAPGLQGLPL*WLEAPS
Trigger: GCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCTG...CAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS TCA 90 bp GGATGTAGTCCGTGGGGCTCTGTTAAGGAAGATTCCGACTTGCCCTaGCCACGCTCGCCAGGGCACAGTCATCAGGGGCCCGCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GCSPWGSVKEDSDLP*PRSPGHSHQGPAQW
Trigger: CCACTGCGCGGGCCCCTGATGACTGTGCCCTGGCGAGCGTGGTCAGGGCAAGTCGGAATCTTCCTTAACAGAGCCCCACGGACTACATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576819.1
ENST00000648681.1
CDS GCA 90 bp GTGCTGGATGTAGTCCGTGGGGCTCTGTTAAGGAAGATTCCGACTTaGCCTGACCACGCTCGCCAGGGCACAGTCATCAGGGGCCCGCGC +
Preference number: 5 (lower is better)
Translates to: VLDVVRGALLRKIPT*PDHARQGTVIRGPR
Trigger: GCGCGGGCCCCTGATGACTGTGCCCTGGCGAGCGTGGTCAGGGCAAGTCGGAATCTTCCTTAACAGAGCCCCACGGACTACATCCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576819.1
ENST00000648681.1
CDS CCA 90 bp GGGAACCAGTCGCCACACAGGTGCTTCACAGTGTCTATGTCATCGTaGCAGAGGAGGCGCAGGCTGACCTCGCTGAGCGCGCTGGATGGC +
Preference number: 5 (lower is better)
Translates to: GNQSPHRCFTVSMSS*QRRRRLTSLSALDG
Trigger: GCCATCCAGCGCGCTCAGCGAGGTCAGCCTGCGCCTCCTCTGCCACGATGACATAGACACTGTGAAGCACCTGTGTGGCGACTGGTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570372.5
ENST00000570819.5
ENST00000571107.5
ENST00000572131.5
ENST00000572169.6
ENST00000572584.2
ENST00000572739.5
ENST00000572757.5
ENST00000572942.5
ENST00000573345.5
ENST00000573593.5
ENST00000574328.5
ENST00000574950.5
ENST00000575076.5
ENST00000575733.5
ENST00000575936.5
ENST00000576787.5
ENST00000576916.5
ENST00000648681.1
ENST00000649205.1
ENST00000649360.1
CDS CCA 90 bp GCAGCTGCCACCATGGGCCACGGGATCTTGTATCCCTGGGAACGGTaGGTCCTGGGCACGTGGCTGGCACTGACATACACTGGAACCGCA +
Preference number: 5 (lower is better)
Translates to: AAATMGHGILYPWER*VLGTWLALTYTGTA
Trigger: TGCGGTTCCAGTGTATGTCAGTGCCAGCCACGTGCCCAGGACCCACCGTTCCCAGGGATACAAGATCCCGTGGCCCATGGTGGCAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576787.5
CDS CCA 90 bp CTGTGTGCCGCAGCTGCCACCATGGGCCACGGGATCTTGTATCCCTaGGAACGGTGGGTCCTGGGCACGTGGCTGGCACTGACATACACT +
Preference number: 5 (lower is better)
Translates to: LCAAAATMGHGILYP*ERWVLGTWLALTYT
Trigger: AGTGTATGTCAGTGCCAGCCACGTGCCCAGGACCCACCGTTCCCAGGGATACAAGATCCCGTGGCCCATGGTGGCAGCTGCGGCACACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576787.5
CDS CCA 90 bp ACTGAGAGCTCTGGAAAGCAGCGCTGTGTGCCGCAGCTGCCACCATaGGCCACGGGATCTTGTATCCCTGGGAACGGTGGGTCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: TESSGKQRCVPQLPP*ATGSCIPGNGGSWA
Trigger: TGCCCAGGACCCACCGTTCCCAGGGATACAAGATCCCGTGGCCCATGGTGGCAGCTGCGGCACACAGCGCTGCTTTCCAGAGCTCTCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576787.5
CDS-3UTR CAA 90 bp CGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGAGCTGAAGAGCCTTaGTGTCTGCTGTGGCGTACC +
Preference number: 5 (lower is better)
Translates to: RMPTMFCSRARVAPGLQLGAEEP*CLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGCTCTTCAGCTCC...CAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
CDS-3UTR CAA 90 bp TGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCAGTCAGCCTTTATTGCGCCCCCTaGTTCCGAGGCTCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: WCGPPASTVRSAEVQAVSLYCAP*FRGSCA
Trigger: GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG...GCTGACTGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGAAGACAGATGGCAGCCTaGAGGCCTAATGTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: DVLFPSPCSTGPAAGAGRRQMAA*RPNVEL
Trigger: GAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCT...TCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAAGACAGATGGCAGCCTaGAGGCCTAATGTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: AHDVLFPSPCSTGPAAGARQMAA*RPNVEL
Trigger: GAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCT...TGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGGGCAGCAAGCAGCATTaGGAATGCAGGGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: PPSECSHTGSALGTVHAQGSKQH*ECRVER
Trigger: CCTCTCCACCCTGCATTCCAAATGCTGCTTGCTGCC...CTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCCTTCAAGCTCCCATACCTTaGTGTCTGCTGTGGCGTACC +
Preference number: 5 (lower is better)
Translates to: GPAAGAGRRAQLDGWQLLQAPIP*CLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGTATGGGAGCTTG...AAGGAGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGGCCTGCTGTGTTAGCTaGGCACAAGTCACCAAACCT +
Preference number: 5 (lower is better)
Translates to: EGRPLPVNAATLGQPWGRACCVS*AQVTKP
Trigger: AGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGC...CCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GTGGACTCTGCAGTCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATAGGCAGGAGAATCGTTaGAACCCTGGAGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: VDSAVPTAPSGSAVLCAHRQENR*NPGGGG
Trigger: GCCTCCACCTCCAGGGTTCAAACGATTCTCCTGCCT...ATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGACTGCAGAGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649360.1
CDS GCA 90 bp TTGTCCGCACTGAGAGCTCTGGAAAGCAGCGCTGTGTGCCGCAGCTaGCACCATGGGCCACGGGATCTTGTATCCCTGGGAACGGTGGGT +
Preference number: 5 (lower is better)
Translates to: LSALRALESSAVCRS*HHGPRDLVSLGTVG
Trigger: ACCCACCGTTCCCAGGGATACAAGATCCCGTGGCCCATGGTGGCAGCTGCGGCACACAGCGCTGCTTTCCAGAGCTCTCAGTGCGGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576787.5
CDS GCA 90 bp AGGCCTCTGTTGTCCGCACTGAGAGCTCTGGAAAGCAGCGCTGTGTaGCGCAGCTGCCACCATGGGCCACGGGATCTTGTATCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: RPLLSALRALESSAV*RSCHHGPRDLVSLG
Trigger: TCCCAGGGATACAAGATCCCGTGGCCCATGGTGGCAGCTGCGGCACACAGCGCTGCTTTCCAGAGCTCTCAGTGCGGACAACAGAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576787.5
CDS-3UTR CAA 90 bp GGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGGGTCCTGGGCGGTGGTaGATATGTGATCCTTTAAAC +
Preference number: 5 (lower is better)
Translates to: GQAPPSECSHTGSALGTVGPGRW*ICDPLN
Trigger: GTTTAAAGGATCACATATCAACCACCGCCCAGGACC...CACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GGGTCAGATGGACAGGAAGGCGGGCTCTGCGGGCGGCCGAAGGGTGGGGCCTGGAAGTTTATTGCTGTGTaGTTGGTGGTGAGGACATGC +
Preference number: 5 (lower is better)
Translates to: GSDGQEGGLCGRPKGGAWKFIAV*LVVRTC
Trigger: GCATGTCCTCACCACCAACAACACAGCAATAAACTT...CCAGGCCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCATCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp AGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATTACTCGATGCCACTCTaGGAAGAGATGCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: SPCSTGPAAGAGRRAQLDYSMPL*EEMPDH
Trigger: ATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTA...ATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GCAGCTCTGGAGGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTTACTCGATGCCACTCTaGGAAGAGATGCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: AALEAEGHRSLRPRLPRVYSMPL*EEMPDH
Trigger: ATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTA...AACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCCTCCAGAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TCCCCACGGCCCCTTCCGGCTCTGCCGTTCTCTGTGCCCATCCAGGGCCTTCCATACTCGATGCCACTCTaGGAAGAGATGCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: SPRPLPALPFSVPIQGLPYSMPL*EEMPDH
Trigger: ATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTA...TGGAAGGCCCTGGATGGGCACAGAGAACGGCAGAGCCGGAAGGGGCCGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTCTTTATTGCGCCCCCTaGTTCCGAGGCTCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: SAVAYLPRMGMLCACPRCLYCAP*FRGSCA
Trigger: GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG...ACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTGGGCCATTCCCTTTATaGCGCCCCCTTGTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: LLWRTCHGWACSAHAHDVGPFPL*RPLVPR
Trigger: CCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCC...AACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGGGGCCATTCCCTTTATaGCGCCCCCTTGTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: RTCHGWACSAHAHDVLFPGPFPL*RPLVPR
Trigger: CCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCC...CGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGCAGAGACAGATGGCAGCCTaGAGGCCTAATGTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: PPSECSHTGSALGTVHAQRQMAA*RPNVEL
Trigger: GAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCT...CTGCGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATAGACAGATGGCAGCCTaGAGGCCTAATGTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: QAPPSECSHTGSALGTVHRQMAA*RPNVEL
Trigger: GAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCT...ATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp AGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACAAGCTCCCATACCTTaGTGTCTGCTGTGGCGTACC +
Preference number: 5 (lower is better)
Translates to: SEGRPLPVNAATLGQPWGQAPIP*CLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGTATGGGAGCTTG...TCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCCAGGGCCTTCCACTTTaGTGGCTGGAGGCACCAAGC +
Preference number: 5 (lower is better)
Translates to: AYLPRMGMLCACPRCSVPQGLPL*WLEAPS
Trigger: GCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCTG...GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCAGGGCCTTCCACTTTaGTGGCTGGAGGCACCAAGC +
Preference number: 5 (lower is better)
Translates to: LLWRTCHGWACSAHAHDVQGLPL*WLEAPS
Trigger: GCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCTG...AACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGCGGCCTGCTGTGTTAGCTaGGCACAAGTCACCAAACCT +
Preference number: 5 (lower is better)
Translates to: APPSECSHTGSALGTVHAACCVS*AQVTKP
Trigger: AGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGC...CGCATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS CCA 90 bp CAGGAGCCCCATGTGCTCAGCCCACAGGGGACTATGATGCCAAACTaGAGGAAGGGCCGCCAAGATGTCTCCAGCACCCACAGGTGTGTC +
Preference number: 5 (lower is better)
Translates to: QEPHVLSPQGTMMPN*RKGRQDVSSTHRCV
Trigger: GACACACCTGTGGGTGCTGGAGACATCTTGGCGGCCCTTCCTCCAGTTTGGCATCATAGTCCCCTGTGGGCTGAGCACATGGGGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571696.6
CDS-3UTR CAA 90 bp GGCGGAAGGACACAGGTCCCTGAGGCCCCGTCTGCCCAGGGTTGTTCCTCCCTCTGGCACCTCTGTAGGTaGCAGCAAGGGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: GGRTQVPEAPSAQGCSSLWHLCR*QQGKRT
Trigger: AGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCA...GAGGGAGGAACAACCCTGGGCAGACGGGGCCTCAGGGACCTGTGTCCTTCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGCCGATGGCACCTCTGTAGGTaGCAGCAAGGGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: DVLFPSPCSTGPAAGAGRWHLCR*QQGKRT
Trigger: AGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCA...TCGGCCTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GGGGCTGAGCCTCAGAGCTCTGTGCTTGCGAGGAAAGCCTCCCCCAGGCTGCCCTGGCACCTCTGTAGGTaGCAGCAAGGGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: GAEPQSSVLARKASPRLPWHLCR*QQGKRT
Trigger: AGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCA...GGGCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGAGGCTCAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGTCCTGGGCGGTGGTaGATATGTGATCCTTTAAAC +
Preference number: 5 (lower is better)
Translates to: PSEGRPLPVNAATLGQPWGPGRW*ICDPLN
Trigger: GTTTAAAGGATCACATATCAACCACCGCCCAGGACC...CCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGGGTCCTGGGCGGTGGTaGATATGTGATCCTTTAAAC +
Preference number: 5 (lower is better)
Translates to: PTMFCSRARVAPGLQLGQGPGRW*ICDPLN
Trigger: GTTTAAAGGATCACATATCAACCACCGCCCAGGACC...CTGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TGGGAGAGGCCCAGTGAGGGCAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTTACTCGATGCCACTCTaGGAAGAGATGCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: WERPSEGRPLPVNAATLGYSMPL*EEMPDH
Trigger: ATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTA...ACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTGCCCTCACTGGGCCTCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp ATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGTACTCGATGCCACTCTaGGAAGAGATGCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: MPTMFCSRARVAPGLQLGYSMPL*EEMPDH
Trigger: ATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTA...CCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTCTTTATTGCGCCCCCTaGTTCCGAGGCTCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: CGVPATDGHALRMPTMFCLYCAP*FRGSCA
Trigger: GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG...ACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GCTGAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTCTTTATTGCGCCCCCTaGTTCCGAGGCTCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: AEEPATDGHALRMPTMFCLYCAP*FRGSCA
Trigger: GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG...ACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407558.9
ENST00000575076.5
CDS-3UTR CAA 90 bp GTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCTTTATTGCGCCCCCTaGTTCCGAGGCTCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: VAYLPRMGMLCACPRCSVLYCAP*FRGSCA
Trigger: GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG...AACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCGGGCCATTCCCTTTATaGCGCCCCCTTGTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: ASLGWFWKGTGHSLYCAPGPFPL*RPLVPR
Trigger: CCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCC...GGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGGGGCCATTCCCTTTATaGCGCCCCCTTGTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: RAIPFIAPPCSEAPVPLRGPFPL*RPLVPR
Trigger: CCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCC...CCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGGGCAGCAAGCAGCATTaGGAATGCAGGGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: GRGRAIPFIAPPCSEAPVGSKQH*ECRVER
Trigger: CCTCTCCACCCTGCATTCCAAATGCTGCTTGCTGCC...CACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGCAGCAAGCAGCATTaGGAATGCAGGGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: WACSAHAHDVLFPSPCSTGSKQH*ECRVER
Trigger: CCTCTCCACCCTGCATTCCAAATGCTGCTTGCTGCC...GGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp AAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCGGCAGCAAGCAGCATTaGGAATGCAGGGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: KGTGHSLYCAPLFRGSCAGSKQH*ECRVER
Trigger: CCTCTCCACCCTGCATTCCAAATGCTGCTTGCTGCC...GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTGCCTGGTGCCTGCCTTCGCCTGCTGTGTTAGCTaGGCACAAGTCACCAAACCT +
Preference number: 5 (lower is better)
Translates to: SCQHRQGGGCCSCLVPAFACCVS*AQVTKP
Trigger: AGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGC...GAAGGCAGGCACCAGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS TCA 90 bp CTCGCTGAGCGCGCTGGATGGCACCACCTCTGTCATTCACACCTCTaGTTGGTCCCCTCCTGCAACCAATCAAGCTGGTCTCCGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LAERAGWHHLCHSHL*LVPSCNQSSWSPAK
Trigger: CTTGGCCGGAGACCAGCTTGATTGGTTGCAGGAGGGGACCAATCAGAGGTGTGAATGACAGAGGTGGTGCCATCCAGCGCGCTCAGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571696.6
CDS CCA 90 bp ATCGTGGCAGAGGAGGCGCAGGCTGACCTCGCTGAGCGCGCTGGATaGCACCACCTCTGTCATTCACACCGATTTTCTTTCGAGTTCCGG +
Preference number: 5 (lower is better)
Translates to: IVAEEAQADLAERAG*HHLCHSHRFSFEFR
Trigger: CCGGAACTCGAAAGAAAATCGGTGTGAATGACAGAGGTGGTGCCATCCAGCGCGCTCAGCGAGGTCAGCCTGCGCCTCCTCTGCCACGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570372.5
CDS-3UTR CAA 90 bp GCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTTGGCACCTCTGTAGGTaGCAGCAAGGGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: AHAHDVLFPSPCSTGPAAWHLCR*QQGKRT
Trigger: AGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCA...AGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCAGACAGATGGCAGCCTaGAGGCCTAATGTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: AYLPRMGMLCACPRCSVPRQMAA*RPNVEL
Trigger: GAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCT...GGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCGGCAGCAAGCAGCATTaGGAATGCAGGGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: ASLGWFWKGTGHSLYCAPGSKQH*ECRVER
Trigger: CCTCTCCACCCTGCATTCCAAATGCTGCTTGCTGCC...GGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCCAAGCTCCCATACCTTaGTGTCTGCTGTGGCGTACC +
Preference number: 5 (lower is better)
Translates to: LCVCCGVPATDGHALRMPQAPIP*CLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGTATGGGAGCTTG...GGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCAAGCTCCCATACCTTaGTGTCTGCTGTGGCGTACC +
Preference number: 5 (lower is better)
Translates to: GRGRAIPFIAPPCSEAPVQAPIP*CLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGTATGGGAGCTTG...CACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGCCTGCTGTGTTAGCTaGGCACAAGTCACCAAACCT +
Preference number: 5 (lower is better)
Translates to: LPRMGMLCACPRCSVPEPACCVS*AQVTKP
Trigger: AGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGC...GGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS GCA 90 bp TGGAGGAAGGGCCGCCAAGATGTCTCCAGCACCCACAGGTGTGTCTaGCATCCCCCGCCACTGTCAGGTGCTGAAAACTCAGAATCTCGT +
Preference number: 5 (lower is better)
Translates to: WRKGRQDVSSTHRCV*HPPPLSGAENSESR
Trigger: ACGAGATTCTGAGTTTTCAGCACCTGACAGTGGCGGGGGATGGCAGACACACCTGTGGGTGCTGGAGACATCTTGGCGGCCCTTCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571696.6
CDS CCA 90 bp ATCGTGGCAGAGGAGGCGCAGGCTGACCTCGCTGAGCGCGCTGGATaGCACCACCTCTGTCATTCACACCAAATTTCTCATTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: IVAEEAQADLAERAG*HHLCHSHQISHSGE
Trigger: CTCTCCGGAATGAGAAATTTGGTGTGAATGACAGAGGTGGTGCCATCCAGCGCGCTCAGCGAGGTCAGCCTGCGCCTCCTCTGCCACGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576787.5
CDS-3UTR CAA 90 bp GTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGGCACCTCTGTAGGTaGCAGCAAGGGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: VSAVAYLPRMGMLCACPRWHLCR*QQGKRT
Trigger: AGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCA...TCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCTGGCACCTCTGTAGGTaGCAGCAAGGGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: LPRMGMLCACPRCSVPEPWHLCR*QQGKRT
Trigger: AGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCA...GGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCTGGCACCTCTGTAGGTaGCAGCAAGGGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: HALRMPTMFCSRARVAPGWHLCR*QQGKRT
Trigger: AGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCA...GCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CATGGCGCGGCCCTCCTGCCAGCACCGTCAAGGAGGGGGATGCTGCTCCTGCCTGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCA +
Preference number: 5 (lower is better)
Translates to: HGAALLPAPSRRGMLLLPVSTEK*DARISP
Trigger: TGGAGATATTCTAGCATCCAACTTCTCTGTTGACAC...AGGCAGGAGCAGCATCCCCCTCCTTGACGGTGCTGGCAGGAGGGCCGCGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CAGCATGGTGCGGCCCTCCCGCCAGCACTGTCAGGTCAGCAGAGGTTCAAGCAGGGTCCTGGGCGGTGGTaGATATGTGATCCTTTAAAC +
Preference number: 5 (lower is better)
Translates to: QHGAALPPALSGQQRFKQGPGRW*ICDPLN
Trigger: GTTTAAAGGATCACATATCAACCACCGCCCAGGACC...CTGCTTGAACCTCTGCTGACCTGACAGTGCTGGCGGGAGGGCCGCACCATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCGGTCCTGGGCGGTGGTaGATATGTGATCCTTTAAAC +
Preference number: 5 (lower is better)
Translates to: HALRMPTMFCSRARVAPGGPGRW*ICDPLN
Trigger: GTTTAAAGGATCACATATCAACCACCGCCCAGGACC...GCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTCCTTAAGTTTATTGCTGTGTaGTTGGTGGTGAGGACATGC +
Preference number: 5 (lower is better)
Translates to: GPAAGAGRRAQLDGWQLLKFIAV*LVVRTC
Trigger: GCATGTCCTCACCACCAACAACACAGCAATAAACTT...AAGGAGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GGGCCACACAGCTGGGCCTGGGTGCTCCAGGAGCATGAGCCCTTCTCCAGGCCAAAGTTTATTGCTGTGTaGTTGGTGGTGAGGACATGC +
Preference number: 5 (lower is better)
Translates to: GPHSWAWVLQEHEPFSRPKFIAV*LVVRTC
Trigger: GCATGTCCTCACCACCAACAACACAGCAATAAACTT...TGGCCTGGAGAAGGGCTCATGCTCCTGGAGCACCCAGGCCCAGCTGTGTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCTACTCGATGCCACTCTaGGAAGAGATGCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: WACSAHAHDVLFPSPCSTYSMPL*EEMPDH
Trigger: ATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTA...GGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTACTCGATGCCACTCTaGGAAGAGATGCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: LWRTCHGWACSAHAHDVLYSMPL*EEMPDH
Trigger: ATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTA...CAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp ACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCGGGCCATTCCCTTTATaGCGCCCCCTTGTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: TCVPPLQEKVPSSFPGRSGPFPL*RPLVPR
Trigger: CCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCC...GCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS GCA 90 bp TACCATGAGTCTGGGTACTCGATGGGGAACCAGTCGCCACACAGGTaGTTCACAGTGTCTATGTCATCGTGGCAGAGGAGGCGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: YHESGYSMGNQSPHR*FTVSMSSWQRRRRL
Trigger: CAGCCTGCGCCTCCTCTGCCACGATGACATAGACACTGTGAAGCACCTGTGTGGCGACTGGTTCCCCATCGAGTACCCAGACTCATGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570372.5
ENST00000570819.5
ENST00000571107.5
ENST00000572131.5
ENST00000572169.6
ENST00000572584.2
ENST00000572739.5
ENST00000572757.5
ENST00000572942.5
ENST00000573593.5
ENST00000574328.5
ENST00000574950.5
ENST00000575076.5
ENST00000575733.5
ENST00000575936.5
ENST00000576787.5
ENST00000576916.5
ENST00000648681.1
ENST00000649205.1
ENST00000649360.1
CDS CCA 90 bp CTGAGCGCGCTGGATGGCACCACCTCTGTCATTCACACCTCTGATTaGTCCCCTCCTGCAACCAATCAAGCTGGTCTCCGGCCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: LSALDGTTSVIHTSD*SPPATNQAGLRPSL
Trigger: AAGACTTGGCCGGAGACCAGCTTGATTGGTTGCAGGAGGGGACCAATCAGAGGTGTGAATGACAGAGGTGGTGCCATCCAGCGCGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571696.6
CDS-3UTR CAA 90 bp GCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCA +
Preference number: 5 (lower is better)
Translates to: AHDVLFPSPCSTGPAAGAVSTEK*DARISP
Trigger: TGGAGATATTCTAGCATCCAACTTCTCTGTTGACAC...TGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGGGTCCTGGGCGGTGGTaGATATGTGATCCTTTAAAC +
Preference number: 5 (lower is better)
Translates to: LWRTCHGWACSAHAHDVLGPGRW*ICDPLN
Trigger: GTTTAAAGGATCACATATCAACCACCGCCCAGGACC...CAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp AGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGGGTCCTGGGCGGTGGTaGATATGTGATCCTTTAAAC +
Preference number: 5 (lower is better)
Translates to: RACHGWACSAHAHDVLFPGPGRW*ICDPLN
Trigger: GTTTAAAGGATCACATATCAACCACCGCCCAGGACC...CGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000575076.5
CDS-3UTR CAA 90 bp AGCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGTACTCGATGCCACTCTaGGAAGAGATGCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: SLCVCCGVPATDGHALRMYSMPL*EEMPDH
Trigger: ATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTA...CATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572942.5
CDS-3UTR CAA 90 bp TTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGCTTTATTGCGCCCCCTaGTTCCGAGGCTCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: FPLLRPLVPRLLCLYGQVLYCAP*FRGSCA
Trigger: GGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAG...CACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CACCGGGCCTGCAGCTGGGGCAGGCCGACGAGCCCAGTTAGATGGCTGGCAGCTGAAAAGAACTTCTTGTaGGATGTGATATCACGATAC +
Preference number: 5 (lower is better)
Translates to: HRACSWGRPTSPVRWLAAEKNFL*DVISRY
Trigger: GTATCGTGATATCACATCCAACAAGAAGTTCTTTTC...AGCTGCCAGCCATCTAACTGGGCTCGTCGGCCTGCCCCAGCTGCAGGCCCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCTGGCACCTCTGTAGGTaGCAGCAAGGGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: EEPATDGHALRMPTMFCSWHLCR*QQGKRT
Trigger: AGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCA...GGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
CDS-3UTR CAA 90 bp GCTTCTTTGGGCTGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTGGCACCTCTGTAGGTaGCAGCAAGGGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: ASLGWFWKGTGHSLYCAPWHLCR*QQGKRT
Trigger: AGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCA...GGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCAGCCCAAAGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CCTCCCAGGGCACTGGTAACTGCACGGAAGGTGCTGAGGAGTAGGAACCGTCCTTGGCACCTCTGTAGGTaGCAGCAAGGGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: PPRALVTARKVLRSRNRPWHLCR*QQGKRT
Trigger: AGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCA...AGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCA +
Preference number: 5 (lower is better)
Translates to: AHAHDVLFPSPCSTGPAAVSTEK*DARISP
Trigger: TGGAGATATTCTAGCATCCAACTTCTCTGTTGACAC...AGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CAGGCCCCTCCCAGTGAATGCAGCCACACTGGGTCAGCCCTGGGGACGGTGCATGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCA +
Preference number: 5 (lower is better)
Translates to: QAPPSECSHTGSALGTVHVSTEK*DARISP
Trigger: TGGAGATATTCTAGCATCCAACTTCTCTGTTGACAC...ATGCACCGTCCCCAGGGCTGACCCAGTGTGGCTGCATTCACTGGGAGGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GAAGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCGGTCCTGGGCGGTGGTaGATATGTGATCCTTTAAAC +
Preference number: 5 (lower is better)
Translates to: EEPATDGHALRMPTMFCSGPGRW*ICDPLN
Trigger: GTTTAAAGGATCACATATCAACCACCGCCCAGGACC...GGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000575076.5
CDS-3UTR CAA 90 bp CTGAGCCCGAGGACAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTAGGAGCTGAAGAGCCTTaGTGTCTGCTGTGGCGTACC +
Preference number: 5 (lower is better)
Translates to: LSPRTNVHGRAFQKTRPLGAEEP*CLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGCTCTTCAGCTCC...TAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTGTCCTCGGGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360862.9
ENST00000414063.6
CDS-3UTR CAA 90 bp TTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGTGTCCAGGAGCTGAAGAGCCTTaGTGTCTGCTGTGGCGTACC +
Preference number: 5 (lower is better)
Translates to: LLRPLVPRLLCLYGQVCPGAEEP*CLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGCTCTTCAGCTCC...TGGACACACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000572942.5
CDS-3UTR CAA 90 bp TTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTGGGCAGCAAGCAGCATTaGGAATGCAGGGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: FPLLRPLVPRLLCLYGQVGSKQH*ECRVER
Trigger: CCTCTCCACCCTGCATTCCAAATGCTGCTTGCTGCC...CACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCGCCTGCTGTGTTAGCTaGGCACAAGTCACCAAACCT +
Preference number: 5 (lower is better)
Translates to: GHSLYCAPLFRGSCAFTVACCVS*AQVTKP
Trigger: AGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGC...GACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS CCA 90 bp GAGGGGGACCACAGCTCCAACTTGCTCACTGGCTCTGCCACCTTATaGACAGGAAGCCACAGTCCCTCTCCCCCAGAAGTTAAGGATATA +
Preference number: 5 (lower is better)
Translates to: EGDHSSNLLTGSATL*TGSHSPSPPEVKDI
Trigger: TATATCCTTAACTTCTGGGGGAGAGGGACTGTGGCTTCCTGTCCATAAGGTGGCAGAGCCAGTGAGCAAGTTGGAGCTGTGGTCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000571798.1
ENST00000574380.5
ENST00000648681.1
CDS CCA 90 bp CAGAAGGGCAGGTGCTTCTGGTTCTCCCTAGATTCTCAACCTTTGTaGCAGCAAGAGGGACAGAGCCCTGTCCATATGACAAGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: QKGRCFWFSLDSQPL*QQEGQSPVHMTRRG
Trigger: CCCCCTCCTTGTCATATGGACAGGGCTCTGTCCCTCTTGCTGCCACAAAGGTTGAGAATCTAGGGAGAACCAGAAGCACCTGCCCTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648681.1
CDS-3UTR CAA 90 bp GCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGCTGGGGCAGAAAAGAACTTCTTGTaGGATGTGATATCACGATAC +
Preference number: 5 (lower is better)
Translates to: AHDVLFPSPCSTGPAAGAEKNFL*DVISRY
Trigger: GTATCGTGATATCACATCCAACAAGAAGTTCTTTTC...TGCCCCAGCTGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GGGCAGGGTGGCGCCGCTAGGACCCTCTGCCATGGCTTTGTGACACTGCAGCTAGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCA +
Preference number: 5 (lower is better)
Translates to: GQGGAARTLCHGFVTLQLVSTEK*DARISP
Trigger: TGGAGATATTCTAGCATCCAACTTCTCTGTTGACAC...TAGCTGCAGTGTCACAAAGCCATGGCAGAGGGTCCTAGCGGCGCCACCCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TCTGCGCATGCCCACGATGTTCTGTTCCCGAGCCCGTGTAGCACCGGGCCTGCAGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCA +
Preference number: 5 (lower is better)
Translates to: SAHAHDVLFPSPCSTGPAVSTEK*DARISP
Trigger: TGGAGATATTCTAGCATCCAACTTCTCTGTTGACAC...TGCAGGCCCGGTGCTACACGGGCTCGGGAACAGAACATCGTGGGCATGCGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCGGTCCTGGGCGGTGGTaGATATGTGATCCTTTAAAC +
Preference number: 5 (lower is better)
Translates to: CVPPLQEKVPSSFPGRSCGPGRW*ICDPLN
Trigger: GTTTAAAGGATCACATATCAACCACCGCCCAGGACC...GCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCTGCCAGGTCCTGGGCGGTGGTaGATATGTGATCCTTTAAAC +
Preference number: 5 (lower is better)
Translates to: WLEAPSSHTFVSAVAYLPGPGRW*ICDPLN
Trigger: GTTTAAAGGATCACATATCAACCACCGCCCAGGACC...TGGCAGGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGAAAGTTTATTGCTGTGTaGTTGGTGGTGAGGACATGC +
Preference number: 5 (lower is better)
Translates to: EPATDGHALRMPTMFCSRKFIAV*LVVRTC
Trigger: GCATGTCCTCACCACCAACAACACAGCAATAAACTT...TCGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000575076.5
CDS-3UTR CAA 90 bp GGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGCCATCTTTGAGGACTACTCGATGCCACTCTaGGAAGAGATGCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: GRVAAVDVEDIGEAIFEDYSMPL*EEMPDH
Trigger: ATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTA...GTCCTCAAAGATGGCTTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR CAA 90 bp TTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACCCAAGCTCCCATACCTTaGTGTCTGCTGTGGCGTACC +
Preference number: 5 (lower is better)
Translates to: FCGWRHQAPIPLCLLWRTQAPIP*CLLWRT
Trigger: GGTACGCCACAGCAGACACAAAGGTATGGGAGCTTG...GGTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGCCAGGGCCTTCCACTTTaGTGGCTGGAGGCACCAAGC +
Preference number: 5 (lower is better)
Translates to: APVPLRSSVSIILAFLPCQGLPL*WLEAPS
Trigger: GCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCTG...GCAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS TCA 90 bp CCTCTGACTATGAGGGCATCATTAATAGCAGGACACAGAGCGCTTTaGCTCACTCTCTGGAGCTCTTCTCCCAACTCAGGCTGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: PLTMRASLIAGHRAL*LTLWSSSPNSGWLR
Trigger: GCGGAGCCAGCCTGAGTTGGGAGAAGAGCTCCAGAGAGTGAGTCAAAGCGCTCTGTGTCCTGCTATTAATGATGCCCTCATAGTCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000573201.6
ENST00000573617.1
ENST00000574256.1
ENST00000574762.1
CDS GCA 90 bp AGACTGGGTTTCCAATGTGGATGGTGGGTTTTCCAGGTGACTGAATaGAAGGCCTCTGTTGTCCGCACTGAGAGCTCTGGAAAGCAGCGC +
Preference number: 5 (lower is better)
Translates to: RLGFQCGWWVFQVTE*KASVVRTESSGKQR
Trigger: GCGCTGCTTTCCAGAGCTCTCAGTGCGGACAACAGAGGCCTTGCATTCAGTCACCTGGAAAACCCACCATCCACATTGGAAACCCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576787.5
CDS CCA 90 bp CCCAGTCTTCTTTCTGTCCTTCTTCTCGGAAACATTACGTCCCCCTaGGGTCACCCTAAGACTCTACTTCAGCAGGCAAACAGGCCCGGA +
Preference number: 5 (lower is better)
Translates to: PSLLSVLLLGNITSP*GHPKTLLQQANRPG
Trigger: TCCGGGCCTGTTTGCCTGCTGAAGTAGAGTCTTAGGGTGACCCCAGGGGGACGTAATGTTTCCGAGAAGAAGGACAGAAAGAAGACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570372.5
ENST00000572169.6
ENST00000572757.5
ENST00000573580.5
ENST00000573593.5
ENST00000573617.1
ENST00000574950.5
ENST00000575733.5
ENST00000575936.5
ENST00000649205.1
CDS CCA 90 bp ATCGTGGCAGAGGAGGCGCAGGCTGACCTCGCTGAGCGCGCTGGATaGCACCACCTCTGTCATTCACACATTTTGTTACCGATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: IVAEEAQADLAERAG*HHLCHSHILLPIFF
Trigger: AAAGAAAATCGGTAACAAAATGTGTGAATGACAGAGGTGGTGCCATCCAGCGCGCTCAGCGAGGTCAGCCTGCGCCTCCTCTGCCACGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573593.5
CDS-3UTR CAA 90 bp CTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCA +
Preference number: 5 (lower is better)
Translates to: LCVCCGVPATDGHALRMPVSTEK*DARISP
Trigger: TGGAGATATTCTAGCATCCAACTTCTCTGTTGACAC...GGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TGTCTGCTGTGGCGTACCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCA +
Preference number: 5 (lower is better)
Translates to: CLLWRTCHGWACSAHAHDVSTEK*DARISP
Trigger: TGGAGATATTCTAGCATCCAACTTCTCTGTTGACAC...ATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGTACGCCACAGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp AGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCA +
Preference number: 5 (lower is better)
Translates to: RACHGWACSAHAHDVLFPVSTEK*DARISP
Trigger: TGGAGATATTCTAGCATCCAACTTCTCTGTTGACAC...CGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
CDS-3UTR CAA 90 bp CAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGCCGGTCCTGGGCGGTGGTaGATATGTGATCCTTTAAAC +
Preference number: 5 (lower is better)
Translates to: QNRPGRVAAVDVEDIGEAGPGRW*ICDPLN
Trigger: GTTTAAAGGATCACATATCAACCACCGCCCAGGACC...GGCTTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR CAA 90 bp TGGTTCTGGAAGGGGACGGGCCATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCAAGTTTATTGCTGTGTaGTTGGTGGTGAGGACATGC +
Preference number: 5 (lower is better)
Translates to: WFWKGTGHSLYCAPLFRGKFIAV*LVVRTC
Trigger: GCATGTCCTCACCACCAACAACACAGCAATAAACTT...GCCTCGGAACAAGGGGGCGCAATAAAGGGAATGGCCCGTCCCCTTCCAGAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GGGGAGCTGAAGAGCCTTTGTGTCTGCTGTGGCGTACCTGCCACGGATGGGCATAAGTTTATTGCTGTGTaGTTGGTGGTGAGGACATGC +
Preference number: 5 (lower is better)
Translates to: GELKSLCVCCGVPATDGHKFIAV*LVVRTC
Trigger: GCATGTCCTCACCACCAACAACACAGCAATAAACTT...ATGCCCATCCGTGGCAGGTACGCCACAGCAGACACAAAGGCTCTTCAGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360862.9
ENST00000414063.6
CDS-3UTR CAA 90 bp CTGAGCCCGAGGACAAATGTCCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTATACTCGATGCCACTCTaGGAAGAGATGCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: LSPRTNVHGRAFQKTRPLYSMPL*EEMPDH
Trigger: ATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTA...TAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGGACATTTGTCCTCGGGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCTGCAAGAATACTCGATGCCACTCTaGGAAGAGATGCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: SSLAGESPLQLSRKELQEYSMPL*EEMPDH
Trigger: ATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTA...TTCTTGCAGCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTACTCGATGCCACTCTaGGAAGAGATGCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: AFHFCGWRHQAPIPLCLLYSMPL*EEMPDH
Trigger: ATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTA...CAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp AGGGCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGTACTCGATGCCACTCTaGGAAGAGATGCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: RAFHFCGWRHQAPIPLCLYSMPL*EEMPDH
Trigger: ATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTA...CAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGGCAGCAAGCAGCATTaGGAATGCAGGGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SIILAFLPCRRKSPPAFQGSKQH*ECRVER
Trigger: CCTCTCCACCCTGCATTCCAAATGCTGCTTGCTGCC...CTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS TCA 90 bp TTCCGGAGAGACTGGGTTTCCAATGTGGATGGTGGGTTTTCCAGGTaGCTGAATGCAAGGCCTCTGTTGTCCGCACTGAGAGCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: FRRDWVSNVDGGFSR*LNARPLLSALRALE
Trigger: TTCCAGAGCTCTCAGTGCGGACAACAGAGGCCTTGCATTCAGTCACCTGGAAAACCCACCATCCACATTGGAAACCCAGTCTCTCCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576787.5
CDS GCA 90 bp GGCAGCACACTGGGAGAGTCTCGTTCTCCACTAACATTGTCAGTGTaGCCTGAGACTGGGCTTACCCATCAGACTCACAAGAGACTGATG +
Preference number: 5 (lower is better)
Translates to: GSTLGESRSPLTLSV*PETGLTHQTHKRLM
Trigger: CATCAGTCTCTTGTGAGTCTGATGGGTAAGCCCAGTCTCAGGGCACACTGACAATGTTAGTGGAGAACGAGACTCTCCCAGTGTGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573201.6
ENST00000574762.1
CDS-3UTR CAA 90 bp GCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCACCTCTGTAGGTaGCAGCAAGGGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: AFHFCGWRHQAPIPLCLLWHLCR*QQGKRT
Trigger: AGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCA...CAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GTAGTCCAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTTGGCACCTCTGTAGGTaGCAGCAAGGGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: VVQNRPGRVAAVDVEDIGWHLCR*QQGKRT
Trigger: AGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCA...ACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTGGACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR CAA 90 bp AATGGAGCATGCCAAGGTCCGACGGGCAGTGTGACCTCCCAGGGCACTGGTAACGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCA +
Preference number: 5 (lower is better)
Translates to: NGACQGPTGSVTSQGTGNVSTEK*DARISP
Trigger: TGGAGATATTCTAGCATCCAACTTCTCTGTTGACAC...GTTACCAGTGCCCTGGGAGGTCACACTGCCCGTCGGACCTTGGCATGCTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GTCCAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGGTCCTGGGCGGTGGTaGATATGTGATCCTTTAAAC +
Preference number: 5 (lower is better)
Translates to: VQNRPGRVAAVDVEDIGEGPGRW*ICDPLN
Trigger: GTTTAAAGGATCACATATCAACCACCGCCCAGGACC...TTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR CAA 90 bp GGCTGGCTAGTGCAGAGCCCAGGTGCTGGATGTAGTCCAAAATCGTCCAGGGAGAAGTTTATTGCTGTGTaGTTGGTGGTGAGGACATGC +
Preference number: 5 (lower is better)
Translates to: GWLVQSPGAGCSPKSSREKFIAV*LVVRTC
Trigger: GCATGTCCTCACCACCAACAACACAGCAATAAACTT...CTCCCTGGACGATTTTGGACTACATCCAGCACCTGGGCTCTGCACTAGCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572739.5
ENST00000573345.5
CDS-3UTR CAA 90 bp ATTCCCTTTATTGCGCCCCCTTGTTCCGAGGCTCCTGTGCCTTTACGGTCAAGTTACTCGATGCCACTCTaGGAAGAGATGCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: IPFIAPPCSEAPVPLRSSYSMPL*EEMPDH
Trigger: ATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTA...ACTTGACCGTAAAGGCACAGGAGCCTCGGAACAAGGGGGCGCAATAAAGGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp AGAGCCTGCCACGGATGGGCATGCTCTGCGCATGCCCACGATGTTCTGTTCCCGGAAAAGAACTTCTTGTaGGATGTGATATCACGATAC +
Preference number: 5 (lower is better)
Translates to: RACHGWACSAHAHDVLFPEKNFL*DVISRY
Trigger: GTATCGTGATATCACATCCAACAAGAAGTTCTTTTC...CGGGAACAGAACATCGTGGGCATGCGCAGAGCATGCCCATCCGTGGCAGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570819.5
ENST00000575076.5
CDS-3UTR CAA 90 bp GCTGTGTTAGCTTGGCACAAGTCACCAAACCTCTGGGCTGTGCTGGTGCATAAGTGGCACCTCTGTAGGTaGCAGCAAGGGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: AVLAWHKSPNLWAVLVHKWHLCR*QQGKRT
Trigger: AGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCA...CTTATGCACCAGCACAGCCCAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CGACATCACATGGTCCGGCTGTACTCGATGCCACTCTTGGAAGAGATGCCCGACAAGTTTATTGCTGTGTaGTTGGTGGTGAGGACATGC +
Preference number: 5 (lower is better)
Translates to: RHHMVRLYSMPLLEEMPDKFIAV*LVVRTC
Trigger: GCATGTCCTCACCACCAACAACACAGCAATAAACTT...GTCGGGCATCTCTTCCAAGAGTGGCATCGAGTACAGCCGGACCATGTGATGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572739.5
CDS-3UTR CAA 90 bp CACACAAATAAAGGCACTGATGGATCCAAAGTCGGGTGCACAGCCCAGTTGCCATACTCGATGCCACTCTaGGAAGAGATGCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: HTNKGTDGSKVGCTAQLPYSMPL*EEMPDH
Trigger: ATGGTCGGGCATCTCTTCCAAGAGTGGCATCGAGTA...TGGCAACTGGGCTGTGCACCCGACTTTGGATCCATCAGTGCCTTTATTTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CCTCCCAGGGCACTGGTAACTGCACGGAAGGTGCTGAGGAGTAGGAACCGTCCTGAAAAGAACTTCTTGTaGGATGTGATATCACGATAC +
Preference number: 5 (lower is better)
Translates to: PPRALVTARKVLRSRNRPEKNFL*DVISRY
Trigger: GTATCGTGATATCACATCCAACAAGAAGTTCTTTTC...AGGACGGTTCCTACTCCTCAGCACCTTCCGTGCAGTTACCAGTGCCCTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TCCATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGTGGCACCTCTGTAGGTaGCAGCAAGGGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: SIILAFLPCRRKSPPAFQWHLCR*QQGKRT
Trigger: AGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCA...CTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GCTCCTGTGCCTTTACGGTCAAGTGTGTCCATAATACTTGCGTTCCTCCCTTGCTGGCACCTCTGTAGGTaGCAGCAAGGGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: APVPLRSSVSIILAFLPCWHLCR*QQGKRT
Trigger: AGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCA...GCAAGGGAGGAACGCAAGTATTATGGACACACTTGACCGTAAAGGCACAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp ACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGGAGCGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCA +
Preference number: 5 (lower is better)
Translates to: TCVPPLQEKVPSSFPGRSVSTEK*DARISP
Trigger: TGGAGATATTCTAGCATCCAACTTCTCTGTTGACAC...GCTCCTTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CAAAATCGTCCAGGGAGGGTGGCCGCCGTTGATGTAGAGGACATAGGTGAAGCCGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCA +
Preference number: 5 (lower is better)
Translates to: QNRPGRVAAVDVEDIGEAVSTEK*DARISP
Trigger: TGGAGATATTCTAGCATCCAACTTCTCTGTTGACAC...GGCTTCACCTATGTCCTCTACATCAACGGCGGCCACCCTCCCTGGACGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573345.5
CDS-3UTR CAA 90 bp CCATGGCAGAGCCTTCCAGAAGACTCGTCCCTTACCCTGTGGGGCAGAAATAGAAAGTTTATTGCTGTGTaGTTGGTGGTGAGGACATGC +
Preference number: 5 (lower is better)
Translates to: PWQSLPEDSSLTLWGRNRKFIAV*LVVRTC
Trigger: GCATGTCCTCACCACCAACAACACAGCAATAAACTT...TCTATTTCTGCCCCACAGGGTAAGGGACGAGTCTTCTGGAAGGCTCTGCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572584.2
ENST00000575076.5
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGGCGTACAAGTTTATTGCTGTGTaGTTGGTGGTGAGGACATGC +
Preference number: 5 (lower is better)
Translates to: LLWLEAPSSHTFVSAVAYKFIAV*LVVRTC
Trigger: GCATGTCCTCACCACCAACAACACAGCAATAAACTT...GTACGCCACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp GCCTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCA +
Preference number: 5 (lower is better)
Translates to: AFHFCGWRHQAPIPLCLLVSTEK*DARISP
Trigger: TGGAGATATTCTAGCATCCAACTTCTCTGTTGACAC...CAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp TGCCATGGAGCCTGCTGTGTTAGCTTGGCACAAGTCACCAAACCTCTGGGCTGTGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCA +
Preference number: 5 (lower is better)
Translates to: CHGACCVSLAQVTKPLGCVSTEK*DARISP
Trigger: TGGAGATATTCTAGCATCCAACTTCTCTGTTGACAC...ACAGCCCAGAGGTTTGGTGACTTGTGCCAAGCTAACACAGCAGGCTCCATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000649205.1
ENST00000649360.1
CDS-3UTR CAA 90 bp CTTCCACTTTTGTGGCTGGAGGCACCAAGCTCCCATACCTTTGTGTCTGCTGTGAAGTTTATTGCTGTGTaGTTGGTGGTGAGGACATGC +
Preference number: 5 (lower is better)
Translates to: LPLLWLEAPSSHTFVSAVKFIAV*LVVRTC
Trigger: GCATGTCCTCACCACCAACAACACAGCAATAAACTT...CACAGCAGACACAAAGGTATGGGAGCTTGGTGCCTCCAGCCACAAAAGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572169.6
ENST00000572584.2
ENST00000577013.6
ENST00000649205.1
ENST00000649360.1
CDS CCA 90 bp GTTTGTGCCGTTTTGTCCAATTCTTTGTTCAAGATGTCAAGAACCTaGATACCCTCCATCGGTAACAACTGTCCAGGAGCCCCATGTGCT +
Preference number: 5 (lower is better)
Translates to: VCAVLSNSLFKMSRT*IPSIGNNCPGAPCA
Trigger: AGCACATGGGGCTCCTGGACAGTTGTTACCGATGGAGGGTATCCAGGTTCTTGACATCTTGAACAAAGAATTGGACAAAACGGCACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571696.6
CDS-3UTR CAA 90 bp AGACAGATGGCAGCCTTGAGGCCTAATGTCGAGCTCAGCTTCCTCCTGTCTGCAAGGCAGTACCATATTTaGTTACCGATTTTCTTTCGA +
Preference number: 5 (lower is better)
Translates to: RQMAALRPNVELSFLLSARQYHI*LPIFFR
Trigger: TCGAAAGAAAATCGGTAACAAAATATGGTACTGCCT...TGCAGACAGGAGGAAGCTGAGCTCGACATTAGGCCTCAAGGCTGCCATCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649205.1
CDS-3UTR CAA 90 bp ATAATACTTGCGTTCCTCCCTTGCAGGAGAAAGTCCCCTCCAGCTTTCCAGGAAGAAAAGAACTTCTTGTaGGATGTGATATCACGATAC +
Preference number: 5 (lower is better)
Translates to: IILAFLPCRRKSPPAFQEEKNFL*DVISRY
Trigger: GTATCGTGATATCACATCCAACAAGAAGTTCTTTTC...TTCCTGGAAAGCTGGAGGGGACTTTCTCCTGCAAGGGAGGAACGCAAGTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000572169.6
ENST00000572584.2
ENST00000572942.5
ENST00000575076.5
ENST00000576916.5
ENST00000649205.1
ENST00000649360.1
CDS GCA 90 bp CTTAATTTCAGCTACTATCATTCCCACAATGGCACCTCTGTAGGTTaGAGCAAGGGAAAAGAACTTCTTGTTGGATGTGATATCACGATA +
Preference number: 5 (lower is better)
Translates to: LNFSYYHSHNGTSVG*SKGKELLVGCDITI
Trigger: TATCGTGATATCACATCCAACAAGAAGTTCTTTTCCCTTGCTGCAACCTACAGAGGTGCCATTGTGGGAATGATAGTAGCTGAAATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 27 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570372.5
ENST00000570819.5
ENST00000571107.5
ENST00000572131.5
ENST00000572169.6
ENST00000572584.2
ENST00000572739.5
ENST00000572757.5
ENST00000572942.5
ENST00000573580.5
ENST00000573593.5
ENST00000574328.5
ENST00000574950.5
ENST00000575076.5
ENST00000575733.5
ENST00000575936.5
ENST00000576787.5
ENST00000576916.5
ENST00000577013.6
ENST00000648681.1
ENST00000649205.1
ENST00000649360.1
CDS CCA 90 bp TCGCAGGTCACTTTCATTTACATAGGGCATGCACCAAATAACCAATaGGAAACCTCTAGAGGGTATTTAAACCCCAGAAAATTCTGTAAC +
Preference number: 5 (lower is better)
Translates to: SQVTFIYIGHAPNNQ*ETSRGYLNPRKFCN
Trigger: GTTACAGAATTTTCTGGGGTTTAAATACCCTCTAGAGGTTTCCCATTGGTTATTTGGTGCATGCCCTATGTAAATGAAAGTGACCTGCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571696.6
CDS CCA 72 bp GCGGCCGCTGGGGGTGTTGTAGGGCTCAGCGCATCCTaGAGGCGAAGGGAGCCGGGAAGTGGGACCGCGCGG +
Preference number: 6 (lower is better)
Translates to: AAAGGVVGLSAS*RRREPGSGTAR
Trigger: CCGCGCGGTCCCACTTCCCGGCTCCCTTCGCCTCCAGGATGCGCTGAGCCCTACAACACCCCCAGCGGCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000360862.9
ENST00000414063.6
ENST00000421765.7
ENST00000570551.5
ENST00000571107.5
ENST00000571696.6
ENST00000572131.5
ENST00000572584.2
ENST00000572739.5
ENST00000572942.5
ENST00000573345.5
ENST00000574380.5
ENST00000575076.5
ENST00000576787.5
ENST00000576916.5
ENST00000577013.6
CDS CCA 72 bp CTGTCATTCACACCTCGTGGGGGAGCCGGCGGCCGCTaGGGGTGTTGTAGGGCTCAGCGCATCCTGGAGGCG +
Preference number: 6 (lower is better)
Translates to: LSFTPRGGAGGR*GCCRAQRILEA
Trigger: CGCCTCCAGGATGCGCTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCCCCCACGAGGTGTGAATGACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000414063.6
ENST00000421765.7
ENST00000571107.5
ENST00000572584.2
ENST00000572739.5
ENST00000572942.5
ENST00000573345.5
ENST00000575076.5
ENST00000576916.5
ENST00000648681.1
CDS CCA 72 bp AGCATCTGGTTCACTCGTGGGGGAGCCGGCGGCCGCTaGGGGTGTTGTAGGGCTCAGCGCATCCTGGAGGCG +
Preference number: 6 (lower is better)
Translates to: SIWFTRGGAGGR*GCCRAQRILEA
Trigger: CGCCTCCAGGATGCGCTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCCCCCACGAGTGAACCAGATGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576787.5
CDS CCA 72 bp CGCTCGCCAGGGCACAGTCATCAGGGGCCCGCGCAGTaGCCTGTGGGACTGTGTGCAGATGGCAAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: RSPGHSHQGPAQ*PVGLCADGKPG
Trigger: GCCTGGCTTGCCATCTGCACACAGTCCCACAGGCCACTGCGCGGGCCCCTGATGACTGTGCCCTGGCGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576819.1
ENST00000648681.1
CDS CCA 72 bp GAATATCTCCATCCTCGTGGGGGAGCCGGCGGCCGCTaGGGGTGTTGTAGGGCTCAGCGCATCCTGGAGGCG +
Preference number: 6 (lower is better)
Translates to: EYLHPRGGAGGR*GCCRAQRILEA
Trigger: CGCCTCCAGGATGCGCTGAGCCCTACAACACCCCCAGCGGCCGCCGGCTCCCCCACGAGGATGGAGATATTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570551.5
ENST00000574380.5
CDS CCA 72 bp GAGGAGGCGCAGGCTGACCTCGCTGAGCGCGCTGGATaGCACCACCTCTGTCATTCACACCTCGTGGGGGAG +
Preference number: 6 (lower is better)
Translates to: EEAQADLAERAG*HHLCHSHLVGE
Trigger: CTCCCCCACGAGGTGTGAATGACAGAGGTGGTGCCATCCAGCGCGCTCAGCGAGGTCAGCCTGCGCCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000414063.6
ENST00000421765.7
ENST00000570819.5
ENST00000571107.5
ENST00000572584.2
ENST00000572739.5
ENST00000572942.5
ENST00000573345.5
ENST00000575076.5
ENST00000576916.5
ENST00000648681.1
CDS CCA 72 bp CAGGGCACAGTCATCAGGGGCCCGCGCAGTGGCCTGTaGGACTGTGTGCAGATGGCAAGCCAGGCTTCGGAG +
Preference number: 6 (lower is better)
Translates to: QGTVIRGPRSGL*DCVQMASQASE
Trigger: CTCCGAAGCCTGGCTTGCCATCTGCACACAGTCCCACAGGCCACTGCGCGGGCCCCTGATGACTGTGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576819.1
ENST00000648681.1
CDS CAA 72 bp CTGTGTGCCGCAGCTGCCACCATGGGCCACGGGATCTaGTATCCCTGGGAACGGTGGGTCCTGGGCACGTGG +
Preference number: 6 (lower is better)
Translates to: LCAAAATMGHGI*YPWERWVLGTW
Trigger: CCACGTGCCCAGGACCCACCGTTCCCAGGGATACAAGATCCCGTGGCCCATGGTGGCAGCTGCGGCACACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576787.5
CDS TCA 72 bp CAGGTGTGTCTGCCATCCCCCGCCACTGTCAGGTGCTaGAAACTCAGAATCTCGTGGGGGAGCCGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: QVCLPSPATVRC*KLRISWGSRRP
Trigger: CGGCCGCCGGCTCCCCCACGAGATTCTGAGTTTTCAGCACCTGACAGTGGCGGGGGATGGCAGACACACCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571696.6
CDS CCA 72 bp GAGGAGGCGCAGGCTGACCTCGCTGAGCGCGCTGGATaGCACCACCTCTGTCATTCACACCTGGTAAGGGGG +
Preference number: 6 (lower is better)
Translates to: EEAQADLAERAG*HHLCHSHLVRG
Trigger: CCCCCTTACCAGGTGTGAATGACAGAGGTGGTGCCATCCAGCGCGCTCAGCGAGGTCAGCCTGCGCCTCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572131.5
CDS TCA 72 bp CCGTGGGGCTCTGTTAAGGAAGATTCCGACTTGCCCTaGCCACGCTCGCCAGGGCACAGTCATCAGGGGCCC +
Preference number: 6 (lower is better)
Translates to: PWGSVKEDSDLP*PRSPGHSHQGP
Trigger: GGGCCCCTGATGACTGTGCCCTGGCGAGCGTGGTCAGGGCAAGTCGGAATCTTCCTTAACAGAGCCCCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576819.1
ENST00000648681.1
CDS CCA 72 bp TCTGGAAAGCAGCGCTGTGTGCCGCAGCTGCCACCATaGGCCACGGGATCTTGTATCCCTGGGAACGGTGGG +
Preference number: 6 (lower is better)
Translates to: SGKQRCVPQLPP*ATGSCIPGNGG
Trigger: CCCACCGTTCCCAGGGATACAAGATCCCGTGGCCCATGGTGGCAGCTGCGGCACACAGCGCTGCTTTCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576787.5
CDS TCA 72 bp GGACTGTGTGCAGATGGCAAGCCAGGCTTCGGAGGCTaGGAGCCCGCTAAGCCTCTGCAGAGCTGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: GLCADGKPGFGG*EPAKPLQSWKG
Trigger: GCCTTTCCAGCTCTGCAGAGGCTTAGCGGGCTCTCAGCCTCCGAAGCCTGGCTTGCCATCTGCACACAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648681.1
CDS CCA 72 bp TCGCCACACAGGTGCTTCACAGTGTCTATGTCATCGTaGCAGAGGAGGCGCAGGCTGACCTCGCTGAGCGCG +
Preference number: 6 (lower is better)
Translates to: SPHRCFTVSMSS*QRRRRLTSLSA
Trigger: CGCGCTCAGCGAGGTCAGCCTGCGCCTCCTCTGCCACGATGACATAGACACTGTGAAGCACCTGTGTGGCGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570372.5
ENST00000570819.5
ENST00000571107.5
ENST00000572131.5
ENST00000572169.6
ENST00000572584.2
ENST00000572739.5
ENST00000572757.5
ENST00000572942.5
ENST00000573345.5
ENST00000573593.5
ENST00000574328.5
ENST00000574950.5
ENST00000575076.5
ENST00000575733.5
ENST00000575936.5
ENST00000576787.5
ENST00000576916.5
ENST00000648681.1
ENST00000649205.1
ENST00000649360.1
CDS CAA 90 bp CCTCTGCTAGCACAGGCTCTGGGAGGACAGGGGATCCTGTCCGTTTaGTGCACTGCTGATCCCCAGTGCAAGTGGAGCAGGAGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: PLLAQALGGQGILSV*CTADPQCKWSRRLS
Trigger: GGAGAGCCTCCTGCTCCACTTGCACTGGGGATCAGCAGTGCACAAAACGGACAGGATCCCCTGTCCTCCCAGAGCCTGTGCTAGCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648681.1
CDS GCA 72 bp TTGTCCGCACTGAGAGCTCTGGAAAGCAGCGCTGTGTaGCGCAGCTGCCACCATGGGCCACGGGATCTTGTA +
Preference number: 6 (lower is better)
Translates to: LSALRALESSAV*RSCHHGPRDLV
Trigger: TACAAGATCCCGTGGCCCATGGTGGCAGCTGCGGCACACAGCGCTGCTTTCCAGAGCTCTCAGTGCGGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576787.5
CDS GCA 72 bp GGCCGCCAAGATGTCTCCAGCACCCACAGGTGTGTCTaGCATCCCCCGCCACTGTCAGGTGCTGAAAACTCA +
Preference number: 6 (lower is better)
Translates to: GRQDVSSTHRCV*HPPPLSGAENS
Trigger: TGAGTTTTCAGCACCTGACAGTGGCGGGGGATGGCAGACACACCTGTGGGTGCTGGAGACATCTTGGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571696.6
CDS GCA 72 bp GGGATCCTGTCCGTTTTGTGCACTGCTGATCCCCAGTaGAAGTGGAGCAGGAGGCTCTCCAGCTGGGTGCAG +
Preference number: 6 (lower is better)
Translates to: GILSVLCTADPQ*KWSRRLSSWVQ
Trigger: CTGCACCCAGCTGGAGAGCCTCCTGCTCCACTTGCACTGGGGATCAGCAGTGCACAAAACGGACAGGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648681.1
CDS GCA 72 bp AGCCAGGCTTCGGAGGCTGAGAGCCCGCTAAGCCTCTaGAGAGCTGGAAAGGCTCATGAGACGAAGTGGCCT +
Preference number: 6 (lower is better)
Translates to: SQASEAESPLSL*RAGKAHETKWP
Trigger: AGGCCACTTCGTCTCATGAGCCTTTCCAGCTCTGCAGAGGCTTAGCGGGCTCTCAGCCTCCGAAGCCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648681.1
CDS CAA 72 bp GCACAGGCTCTGGGAGGACAGGGGATCCTGTCCGTTTaGTGCACTGCTGATCCCCAGTGCAAGTGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: AQALGGQGILSV*CTADPQCKWSR
Trigger: CCTGCTCCACTTGCACTGGGGATCAGCAGTGCACAAAACGGACAGGATCCCCTGTCCTCCCAGAGCCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648681.1
CDS CCA 72 bp GAGGAGGCGCAGGCTGACCTCGCTGAGCGCGCTGGATaGCACCACCTCTGTCATTCACACCGATTTTCTTTC +
Preference number: 6 (lower is better)
Translates to: EEAQADLAERAG*HHLCHSHRFSF
Trigger: GAAAGAAAATCGGTGTGAATGACAGAGGTGGTGCCATCCAGCGCGCTCAGCGAGGTCAGCCTGCGCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570372.5
CDS CCA 72 bp GAACCAAACCAGAGGTGGCACAGGATGACCACCACGTaGCTACACAGACCAATCTCAGAGGGTCAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: EPNQRWHRMTTT*LHRPISEGQGS
Trigger: GCTGCCCTGACCCTCTGAGATTGGTCTGTGTAGCCACGTGGTGGTCATCCTGTGCCACCTCTGGTTTGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573201.6
ENST00000574762.1
CDS CCA 72 bp GAGGAGGCGCAGGCTGACCTCGCTGAGCGCGCTGGATaGCACCACCTCTGTCATTCACACCAAATTTCTCAT +
Preference number: 6 (lower is better)
Translates to: EEAQADLAERAG*HHLCHSHQISH
Trigger: ATGAGAAATTTGGTGTGAATGACAGAGGTGGTGCCATCCAGCGCGCTCAGCGAGGTCAGCCTGCGCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576787.5
CDS CAA 90 bp ACGCCCAGACTTAGGATGTACGCGACTTGTGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCATCCTCGTGGGGGAGCCGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: TPRLRMYATCVSTEK*DARISPSSWGSRRP
Trigger: CGGCCGCCGGCTCCCCCACGAGGATGGAGATATTCTAGCATCCAACTTCTCTGTTGACACACAAGTCGCGTACATCCTAAGTCTGGGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570551.5
ENST00000574380.5
CDS TCA 72 bp GCGAGGCTGCAGCAGAAAGGCCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCAGACTTAGGATGTACG +
Preference number: 6 (lower is better)
Translates to: ARLQQKGLCRAS*TLSRRPDLGCT
Trigger: CGTACATCCTAAGTCTGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAGGCCTTTCTGCTGCAGCCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571107.5
CDS TCA 72 bp CGCGCTGGATGGCACCACCTCTGTCATTCACACCTCTaGTTGGTCCCCTCCTGCAACCAATCAAGCTGGTCT +
Preference number: 6 (lower is better)
Translates to: RAGWHHLCHSHL*LVPSCNQSSWS
Trigger: AGACCAGCTTGATTGGTTGCAGGAGGGGACCAATCAGAGGTGTGAATGACAGAGGTGGTGCCATCCAGCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571696.6
CDS GCA 72 bp TCTGGGTACTCGATGGGGAACCAGTCGCCACACAGGTaGTTCACAGTGTCTATGTCATCGTGGCAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: SGYSMGNQSPHR*FTVSMSSWQRR
Trigger: CCTCCTCTGCCACGATGACATAGACACTGTGAAGCACCTGTGTGGCGACTGGTTCCCCATCGAGTACCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000570372.5
ENST00000570819.5
ENST00000571107.5
ENST00000572131.5
ENST00000572169.6
ENST00000572584.2
ENST00000572739.5
ENST00000572757.5
ENST00000572942.5
ENST00000573593.5
ENST00000574328.5
ENST00000574950.5
ENST00000575076.5
ENST00000575733.5
ENST00000575936.5
ENST00000576787.5
ENST00000576916.5
ENST00000648681.1
ENST00000649205.1
ENST00000649360.1
CDS GCA 72 bp CCTGAACATCATCTGAGGGGGACCACAGCTCCAACTTaGTCACTGGCTCTGCCACCTTATGGACAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: PEHHLRGTTAPT*SLALPPYGQEA
Trigger: GGCTTCCTGTCCATAAGGTGGCAGAGCCAGTGAGCAAGTTGGAGCTGTGGTCCCCCTCAGATGATGTTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000571798.1
ENST00000574380.5
ENST00000648681.1
CDS CCA 72 bp CACAGCTCCAACTTGCTCACTGGCTCTGCCACCTTATaGACAGGAAGCCACAGTCCCTCTCCCCCAGAAGTT +
Preference number: 6 (lower is better)
Translates to: HSSNLLTGSATL*TGSHSPSPPEV
Trigger: AACTTCTGGGGGAGAGGGACTGTGGCTTCCTGTCCATAAGGTGGCAGAGCCAGTGAGCAAGTTGGAGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000571798.1
ENST00000574380.5
ENST00000648681.1
CDS CCA 72 bp CTGGATGGCACCACCTCTGTCATTCACACCTCTGATTaGTCCCCTCCTGCAACCAATCAAGCTGGTCTCCGG +
Preference number: 6 (lower is better)
Translates to: LDGTTSVIHTSD*SPPATNQAGLR
Trigger: CCGGAGACCAGCTTGATTGGTTGCAGGAGGGGACCAATCAGAGGTGTGAATGACAGAGGTGGTGCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571696.6
CDS CCA 72 bp AGCCTCTGCAGAGCTGGAAAGGCTCATGAGACGAAGTaGCCTCTGCTGTGCAAAACAACAGAGGGTGGGGTC +
Preference number: 6 (lower is better)
Translates to: SLCRAGKAHETK*PLLCKTTEGGV
Trigger: GACCCCACCCTCTGTTGTTTTGCACAGCAGAGGCCACTTCGTCTCATGAGCCTTTCCAGCTCTGCAGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648681.1
CDS CAA 90 bp GAGGGTCAGGGCAGCACACTGGGAGAGTCTCGTTCTCCACTAACATaGTCAGTGTGCCCTGAGACTGGGCTTACCCATCAGACTCACAAG +
Preference number: 6 (lower is better)
Translates to: EGQGSTLGESRSPLT*SVCPETGLTHQTHK
Trigger: CTTGTGAGTCTGATGGGTAAGCCCAGTCTCAGGGCACACTGACAATGTTAGTGGAGAACGAGACTCTCCCAGTGTGCTGCCCTGACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573201.6
ENST00000574762.1
CDS TCA 72 bp CTGGATGTAGTCCGTGGGGCTCTATGCCGTGCTTCCTaGACTCTTTCACGACGCCCAGACTTAGGATGTACG +
Preference number: 6 (lower is better)
Translates to: LDVVRGALCRAS*TLSRRPDLGCT
Trigger: CGTACATCCTAAGTCTGGGCGTCGTGAAAGAGTTCAGGAAGCACGGCATAGAGCCCCACGGACTACATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421765.7
CDS TCA 72 bp GAGCCCGCTAAGCCTCTGCAGAGCTGGAAAGGCTCATaGGACGAAGTGGCCTCTGCTGTGCAAAACAACAGA +
Preference number: 6 (lower is better)
Translates to: EPAKPLQSWKGS*DEVASAVQNNR
Trigger: TCTGTTGTTTTGCACAGCAGAGGCCACTTCGTCTCATGAGCCTTTCCAGCTCTGCAGAGGCTTAGCGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648681.1
CDS GCA 72 bp ATCTCCATCTCGATGGGGAACCAGTCGCCACACAGGTaGTTCACAGTGTCTATGTCATCGTGGCAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: ISISMGNQSPHR*FTVSMSSWQRR
Trigger: CCTCCTCTGCCACGATGACATAGACACTGTGAAGCACCTGTGTGGCGACTGGTTCCCCATCGAGATGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573345.5
CDS CCA 72 bp CAGTTCCACGTGGCTGGGGAGGCCTCACAATTACGGTaGAAGGTAAAAGGCATGTCTCACATGGTGGCAGAC +
Preference number: 6 (lower is better)
Translates to: QFHVAGEASQLR*KVKGMSHMVAD
Trigger: GTCTGCCACCATGTGAGACATGCCTTTTACCTTCCACCGTAATTGTGAGGCCTCCCCAGCCACGTGGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573201.6
CDS CAA 90 bp TGGCAGAAGGGCAGGTGCTTCTGGTTCTCCCTAGATTCTCAACCTTaGTGGCAGCAAGAGGGACAGAGCCCTGTCCATATGACAAGGAGG +
Preference number: 6 (lower is better)
Translates to: WQKGRCFWFSLDSQP*WQQEGQSPVHMTRR
Trigger: CCTCCTTGTCATATGGACAGGGCTCTGTCCCTCTTGCTGCCACAAAGGTTGAGAATCTAGGGAGAACCAGAAGCACCTGCCCTTCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648681.1
CDS CCA 72 bp CCTGGATGCCTGTCTTCACATAAGCTAGACGGCCTGTaGAGTGTGGGGTCACCCCTCTCTTTCCTGCTTATT +
Preference number: 6 (lower is better)
Translates to: PGCLSSHKLDGL*SVGSPLSFLLI
Trigger: AATAAGCAGGAAAGAGAGGGGTGACCCCACACTCCACAGGCCGTCTAGCTTATGTGAAGACAGGCATCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648681.1
CDS CAA 72 bp GGCAGGTGCTTCTGGTTCTCCCTAGATTCTCAACCTTaGTGGCAGCAAGAGGGACAGAGCCCTGTCCATATG +
Preference number: 6 (lower is better)
Translates to: GRCFWFSLDSQP*WQQEGQSPVHM
Trigger: CATATGGACAGGGCTCTGTCCCTCTTGCTGCCACAAAGGTTGAGAATCTAGGGAGAACCAGAAGCACCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648681.1
CDS CAA 90 bp TCCTCTGACTATGAGGGCATCATTAATAGCAGGACACAGAGCGCTTaGACTCACTCTCTGGAGCTCTTCTCCCAACTCAGGCTGGCTCCG +
Preference number: 6 (lower is better)
Translates to: SSDYEGIINSRTQSA*THSLELFSQLRLAP
Trigger: CGGAGCCAGCCTGAGTTGGGAGAAGAGCTCCAGAGAGTGAGTCAAAGCGCTCTGTGTCCTGCTATTAATGATGCCCTCATAGTCAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000573201.6
ENST00000573617.1
ENST00000574256.1
ENST00000574762.1
CDS TCA 72 bp GACTGGGTTTCCAATGTGGATGGTGGGTTTTCCAGGTaGCTGAATGCAAGGCCTCTGTTGTCCGCACTGAGA +
Preference number: 6 (lower is better)
Translates to: DWVSNVDGGFSR*LNARPLLSALR
Trigger: TCTCAGTGCGGACAACAGAGGCCTTGCATTCAGTCACCTGGAAAACCCACCATCCACATTGGAAACCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576787.5
CDS GCA 72 bp CTGGGAGAGTCTCGTTCTCCACTAACATTGTCAGTGTaGCCTGAGACTGGGCTTACCCATCAGACTCACAAG +
Preference number: 6 (lower is better)
Translates to: LGESRSPLTLSV*PETGLTHQTHK
Trigger: CTTGTGAGTCTGATGGGTAAGCCCAGTCTCAGGGCACACTGACAATGTTAGTGGAGAACGAGACTCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573201.6
ENST00000574762.1
CDS CAA 72 bp TCAGGCCTACAGGGCACTGTTGGCCGAACCCACATTTaGTTACCGATTTTCTTTCGAGTTCCGGTGTCTCCC +
Preference number: 6 (lower is better)
Translates to: SGLQGTVGRTHI*LPIFFRVPVSP
Trigger: GGGAGACACCGGAACTCGAAAGAAAATCGGTAACAAAATGTGGGTTCGGCCAACAGTGCCCTGTAGGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574256.1
ENST00000574950.5
ENST00000575733.5
CDS CAA 90 bp CTCTGTCATTCACACCTGGTAAGGGGGCCCATGGGTCTTCTGGCGTaGGGGATGTACAGGTTATGTTCATGCCATGTCAACTCATCAAGC +
Preference number: 6 (lower is better)
Translates to: LCHSHLVRGPMGLLA*GMYRLCSCHVNSSS
Trigger: GCTTGATGAGTTGACATGGCATGAACATAACCTGTACATCCCCAACGCCAGAAGACCCATGGGCCCCCTTACCAGGTGTGAATGACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572131.5
CDS CAA 90 bp ACGCCCAGACTTAGGATGTACGCGACTTGTGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCATCTCGATGGGGAACCAGTCGCCAC +
Preference number: 6 (lower is better)
Translates to: TPRLRMYATCVSTEK*DARISPSRWGTSRH
Trigger: GTGGCGACTGGTTCCCCATCGAGATGGAGATATTCTAGCATCCAACTTCTCTGTTGACACACAAGTCGCGTACATCCTAAGTCTGGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573345.5
CDS TCA 72 bp ATGAGGGCATCATTAATAGCAGGACACAGAGCGCTTTaGCTCACTCTCTGGAGCTCTTCTCCCAACTCAGGC +
Preference number: 6 (lower is better)
Translates to: MRASLIAGHRAL*LTLWSSSPNSG
Trigger: GCCTGAGTTGGGAGAAGAGCTCCAGAGAGTGAGTCAAAGCGCTCTGTGTCCTGCTATTAATGATGCCCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000573201.6
ENST00000573617.1
ENST00000574256.1
ENST00000574762.1
CDS CCA 72 bp CTTTCTGTCCTTCTTCTCGGAAACATTACGTCCCCCTaGGGTCACCCTAAGACTCTACTTCAGCAGGCAAAC +
Preference number: 6 (lower is better)
Translates to: LSVLLLGNITSP*GHPKTLLQQAN
Trigger: GTTTGCCTGCTGAAGTAGAGTCTTAGGGTGACCCCAGGGGGACGTAATGTTTCCGAGAAGAAGGACAGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000407558.9
ENST00000424546.6
ENST00000570372.5
ENST00000572169.6
ENST00000572757.5
ENST00000573580.5
ENST00000573593.5
ENST00000573617.1
ENST00000574950.5
ENST00000575733.5
ENST00000575936.5
ENST00000649205.1
CDS CCA 72 bp AGGTGCTTCTGGTTCTCCCTAGATTCTCAACCTTTGTaGCAGCAAGAGGGACAGAGCCCTGTCCATATGACA +
Preference number: 6 (lower is better)
Translates to: RCFWFSLDSQPL*QQEGQSPVHMT
Trigger: TGTCATATGGACAGGGCTCTGTCCCTCTTGCTGCCACAAAGGTTGAGAATCTAGGGAGAACCAGAAGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648681.1
CDS CCA 72 bp TGGCCAGACCGAAATTTCAGGCCTACAGGGCACTGTTaGCCGAACCCACATTTTGTTACCGATTTTCTTTCG +
Preference number: 6 (lower is better)
Translates to: WPDRNFRPTGHC*PNPHFVTDFLS
Trigger: CGAAAGAAAATCGGTAACAAAATGTGGGTTCGGCCAACAGTGCCCTGTAGGCCTGAAATTTCGGTCTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574256.1
ENST00000574950.5
ENST00000575733.5
CDS CAA 72 bp TACCTCCTACTGGGTCCCTCCCATAATATATGGGAATaGCAGATGAGATTTGGGTGGGGACACAGCCAAACC +
Preference number: 6 (lower is better)
Translates to: YLLLGPSHNIWE*QMRFGWGHSQT
Trigger: GGTTTGGCTGTGTCCCCACCCAAATCTCATCTGCAATTCCCATATATTATGGGAGGGACCCAGTAGGAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573201.6
CDS CAA 72 bp CTTAGGATGTACGCGACTTGTGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCATCCTCGTGGGGGAGC +
Preference number: 6 (lower is better)
Translates to: LRMYATCVSTEK*DARISPSSWGS
Trigger: GCTCCCCCACGAGGATGGAGATATTCTAGCATCCAACTTCTCTGTTGACACACAAGTCGCGTACATCCTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570551.5
ENST00000574380.5
CDS CAA 72 bp CTGGCCAGACCGAAATTTCAGGCCTACAGGGCACTGTaGGCCGAACCCACATTTTGTTACCGATTTTCTTTC +
Preference number: 6 (lower is better)
Translates to: LARPKFQAYRAL*AEPTFCYRFSF
Trigger: GAAAGAAAATCGGTAACAAAATGTGGGTTCGGCCAACAGTGCCCTGTAGGCCTGAAATTTCGGTCTGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574256.1
ENST00000574950.5
ENST00000575733.5
CDS CAA 90 bp ACCGAAATTTCAGGCCTACAGGGCACTGTTGGCCGAACCCACATTTaGTTACCGATTTTCTTTCGAGTTCCGGTGTCTCCCAGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: TEISGLQGTVGRTHI*LPIFFRVPVSPSLL
Trigger: AAGAAGACTGGGAGACACCGGAACTCGAAAGAAAATCGGTAACAAAATGTGGGTTCGGCCAACAGTGCCCTGTAGGCCTGAAATTTCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574256.1
ENST00000574950.5
ENST00000575733.5
CDS TCA 72 bp AGCCTCTGGTTGGCTGCTTTCCTCAACCAATCAGACTaGTCGCAGGTCACTTTCATTTACATAGGGCATGCA +
Preference number: 6 (lower is better)
Translates to: SLWLAAFLNQSD*SQVTFIYIGHA
Trigger: TGCATGCCCTATGTAAATGAAAGTGACCTGCGATCAGTCTGATTGGTTGAGGAAAGCAGCCAACCAGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571696.6
CDS GCA 72 bp CTTATTCACTATCATGAGAACAGCATGGGAAAGACCTaGCCCACGATTCAATTACCTCCTACTGGGTCCCTC +
Preference number: 6 (lower is better)
Translates to: LIHYHENSMGKT*PTIQLPPTGSL
Trigger: GAGGGACCCAGTAGGAGGTAATTGAATCGTGGGGCAGGTCTTTCCCATGCTGTTCTCATGATAGTGAATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573201.6
CDS GCA 72 bp GGTCTTCTGGCGTTGGGGATGTACAGGTTATGTTCATaGCATGTCAACTCATCAAGCAGTGCACTTTTCTCG +
Preference number: 6 (lower is better)
Translates to: GLLALGMYRLCS*HVNSSSSALFS
Trigger: CGAGAAAAGTGCACTGCTTGATGAGTTGACATGGCATGAACATAACCTGTACATCCCCAACGCCAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572131.5
CDS CCA 72 bp TTCAATTACCTCCTACTGGGTCCCTCCCATAATATATaGGAATTGCAGATGAGATTTGGGTGGGGACACAGC +
Preference number: 6 (lower is better)
Translates to: FNYLLLGPSHNI*ELQMRFGWGHS
Trigger: GCTGTGTCCCCACCCAAATCTCATCTGCAATTCCCATATATTATGGGAGGGACCCAGTAGGAGGTAATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573201.6
CDS CAA 72 bp CTTAGGATGTACGCGACTTGTGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCATCTCGATGGGGAACC +
Preference number: 6 (lower is better)
Translates to: LRMYATCVSTEK*DARISPSRWGT
Trigger: GGTTCCCCATCGAGATGGAGATATTCTAGCATCCAACTTCTCTGTTGACACACAAGTCGCGTACATCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573345.5
CDS CCA 72 bp GTTTTGTCCAATTCTTTGTTCAAGATGTCAAGAACCTaGATACCCTCCATCGGTAACAACTGTCCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: VLSNSLFKMSRT*IPSIGNNCPGA
Trigger: GGCTCCTGGACAGTTGTTACCGATGGAGGGTATCCAGGTTCTTGACATCTTGAACAAAGAATTGGACAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571696.6
CDS CAA 90 bp ACGCCCAGACTTAGGATGTACGCGACTTGTGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCATCCTCTTTATGTATTTTGGTCCTG +
Preference number: 6 (lower is better)
Translates to: TPRLRMYATCVSTEK*DARISPSSLCILVL
Trigger: CAGGACCAAAATACATAAAGAGGATGGAGATATTCTAGCATCCAACTTCTCTGTTGACACACAAGTCGCGTACATCCTAAGTCTGGGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000571107.5
ENST00000572131.5
ENST00000572169.6
ENST00000572584.2
ENST00000572757.5
ENST00000572942.5
ENST00000573580.5
ENST00000573593.5
ENST00000574328.5
ENST00000574950.5
ENST00000575076.5
ENST00000577013.6
ENST00000648681.1
ENST00000649205.1
ENST00000649360.1
CDS CAA 72 bp CTTAGGATGTACGCGACTTGTGTGTCAACAGAGAAGTaGGATGCTAGAATATCTCCATCCTCTTTATGTATT +
Preference number: 6 (lower is better)
Translates to: LRMYATCVSTEK*DARISPSSLCI
Trigger: AATACATAAAGAGGATGGAGATATTCTAGCATCCAACTTCTCTGTTGACACACAAGTCGCGTACATCCTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000360862.9
ENST00000407558.9
ENST00000414063.6
ENST00000421765.7
ENST00000424546.6
ENST00000570819.5
ENST00000571107.5
ENST00000571798.1
ENST00000572131.5
ENST00000572169.6
ENST00000572584.2
ENST00000572757.5
ENST00000572942.5
ENST00000573580.5
ENST00000573593.5
ENST00000574328.5
ENST00000574950.5
ENST00000575076.5
ENST00000577013.6
ENST00000648681.1
ENST00000649205.1
ENST00000649360.1
CDS CAA 72 bp TTTTCTTGCTTTGTTTGTGCCGTTTTGTCCAATTCTTaGTTCAAGATGTCAAGAACCTGGATACCCTCCATC +
Preference number: 6 (lower is better)
Translates to: FSCFVCAVLSNS*FKMSRTWIPSI
Trigger: GATGGAGGGTATCCAGGTTCTTGACATCTTGAACAAAGAATTGGACAAAACGGCACAAACAAAGCAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571696.6
CDS CCA 72 bp ACTTTCATTTACATAGGGCATGCACCAAATAACCAATaGGAAACCTCTAGAGGGTATTTAAACCCCAGAAAA +
Preference number: 6 (lower is better)
Translates to: TFIYIGHAPNNQ*ETSRGYLNPRK
Trigger: TTTTCTGGGGTTTAAATACCCTCTAGAGGTTTCCCATTGGTTATTTGGTGCATGCCCTATGTAAATGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571696.6