RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for N4BP2L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000139597

Ensembl transcript IDs: ENST00000343281.9, ENST00000380130.7, ENST00000380133.6, ENST00000380139.8, ENST00000459716.6, ENST00000464470.1, ENST00000472298.1, ENST00000495479.5, ENST00000530622.6, ENST00000613078.4, ENST00000635178.1, ENST00000635608.1

Found 560 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACCCCATGGCATGCCAAGGCTGCTCTGCTCCCAGAACTGCCAATaGCCAGCGAAACGGGAGGACTCAAAGTCAACTGCCAAGCTACCT +
Preference number: 1 (lower is better)
Translates to: PPHGMPRLLCSQNCQ*PAKREDSKSTAKLP
Trigger: AGGTAGCTTGGCAGTTGACTTTGAGTCCTCCCGTTTCGCTGGGCATTGGCAGTTCTGGGAGCAGAGCAGCCTTGGCATGCCATGGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464470.1
3UTR TCA 90 bp CCTGCCTCTCCACCATTCCATCCTCACCACCGGCCTCCCTTCCGCTaGGCTGTGGCCCATTTCCTCGCTTACGTCCCAGACTTTTCTATA +
Preference number: 1 (lower is better)
Translates to: PASPPFHPHHRPPFR*AVAHFLAYVPDFSI
Trigger: TATAGAAAAGTCTGGGACGTAAGCGAGGAAATGGGCCACAGCTCAGCGGAAGGGAGGCCGGTGGTGAGGATGGAATGGTGGAGAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464470.1
3UTR GCA 90 bp CCAGAACTGCCAATGCCCAGCGAAACGGGAGGACTCAAAGTCAACTaGCAAGCTACCTTCTTCACTCCAGAGCCAGGATCCAGGGAACAC +
Preference number: 1 (lower is better)
Translates to: PELPMPSETGGLKVN*QATFFTPEPGSREH
Trigger: GTGTTCCCTGGATCCTGGCTCTGGAGTGAAGAAGGTAGCTTGGCAGTTGACTTTGAGTCCTCCCGTTTCGCTGGGCATTGGCAGTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
3UTR GCA 90 bp CTCTACCAGCCCAGACGAGTCAAGCCATCCATATTGAGCTGGTTATaGCACCACCCTATCAACCAAGATACCCAGGACTACCTGGGCCTG +
Preference number: 1 (lower is better)
Translates to: LYQPRRVKPSILSWL*HHPINQDTQDYLGL
Trigger: CAGGCCCAGGTAGTCCTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGATGGCTTGACTCGTCTGGGCTGGTAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR CCA 90 bp CGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTaGCATTGTTGGAAGGCAATGCATTATTCCTGTCCTGGTTTCTGT +
Preference number: 1 (lower is better)
Translates to: RGPSGLETLCRNSSI*HCWKAMHYSCPGFC
Trigger: ACAGAAACCAGGACAGGAATAATGCATTGCCTTCCAACAATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
3UTR CCA 90 bp GTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCCTCCGGTTTaGAAACTCTGTGTAGGAATTCCAGTATCTGGCATTGTTGGAAGG +
Preference number: 1 (lower is better)
Translates to: VIGALICKSTVGPPV*KLCVGIPVSGIVGR
Trigger: CCTTCCAACAATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGTGGATTTACAAATGAGAGCTCCTATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
3UTR CCA 90 bp GCTGGTTATGCCACCACCCTATCAACCAAGATACCCAGGACTACCTaGGCCTGGAAAATGGGAGCATTATTAAGTAGATCATTAGGAGAT +
Preference number: 1 (lower is better)
Translates to: AGYATTLSTKIPRTT*AWKMGALLSRSLGD
Trigger: ATCTCCTAATGATCTACTTAATAATGCTCCCATTTTCCAGGCCCAGGTAGTCCTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR GCA 90 bp ATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTaGCTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTAATT +
Preference number: 1 (lower is better)
Translates to: MSMAFIYPCMTYILG*LISCTPKHLSCRLI
Trigger: AATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR CCA 90 bp TATGCCACCACCCTATCAACCAAGATACCCAGGACTACCTGGGCCTaGAAAATGGGAGCATTATTAAGTAGATCATTAGGAGATTATTTT +
Preference number: 1 (lower is better)
Translates to: YATTLSTKIPRTTWA*KMGALLSRSLGDYF
Trigger: AAAATAATCTCCTAATGATCTACTTAATAATGCTCCCATTTTCCAGGCCCAGGTAGTCCTGGGTATCTTGGTTGATAGGGTGGTGGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR TCA 90 bp AATGAGACCCTATTGCCCATAAAGAGCATTTGCCAGTTCTATGAATaGTGCAAACAGCGAACACAATACAAGTCAATATTGGGTGTTCAA +
Preference number: 1 (lower is better)
Translates to: NETLLPIKSICQFYE*CKQRTQYKSILGVQ
Trigger: TTGAACACCCAATATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCAAATGCTCTTTATGGGCAATAGGGTCTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR GCA 90 bp TTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTTCTTaGACTCCCAAACATTTGAGCTGCCGACTAATTACACATGTTAAT +
Preference number: 1 (lower is better)
Translates to: FIYPCMTYILGCLIS*TPKHLSCRLITHVN
Trigger: ATTAACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR CCA 90 bp CAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATaGGAGTTGAAAAACAGATCACTTCTACAGGGGATAAAGTTGATG +
Preference number: 1 (lower is better)
Translates to: QVNIGCSKSYTNQKP*ELKNRSLLQGIKLM
Trigger: CATCAACTTTATCCCCTGTAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR CCA 90 bp AGTTCTATGAATGATGCAAACAGCGAACACAATACAAGTCAATATTaGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGAGTTGAA +
Preference number: 1 (lower is better)
Translates to: SSMNDANSEHNTSQY*VFKELHKSEAMGVE
Trigger: TTCAACTCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR GCA 90 bp CACCATTCCATCCTCACCACCGGCCTCCCTTCCGCTGAGCTGTGGCCCATTTCCTCCCAGAACTGCCAATaGCCAGCGAAACGGGAGGAC +
Preference number: 2 (lower is better)
Translates to: HHSILTTGLPSAELWPISSQNCQ*PAKRED
Trigger: GTCCTCCCGTTTCGCTGGGCATTGGCAGTTCTGGGA...GGAAATGGGCCACAGCTCAGCGGAAGGGAGGCCGGTGGTGAGGATGGAATGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
3UTR-3UTR TCA 90 bp CCCAGAACTGCCAATGCCCAGCGAAACGGGAGGACTCAAAGTCAACTGCCAAGCGGATCCAGGGAACACTaGAGATTTATCTCAGCTGAC +
Preference number: 2 (lower is better)
Translates to: PRTANAQRNGRTQSQLPSGSREH*RFISAD
Trigger: GTCAGCTGAGATAAATCTTCAGTGTTCCCTGGATCC...GCTTGGCAGTTGACTTTGAGTCCTCCCGTTTCGCTGGGCATTGGCAGTTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
3UTR-3UTR TCA 90 bp CAGAACTGCCAATGCCCAGCGAAACGGGAGGACTCAAAGTCAACTGCCAAGCTATGTGGAGCCATAAATTaGCTCCAAGGTCAGAGCTCT +
Preference number: 2 (lower is better)
Translates to: QNCQCPAKREDSKSTAKLCGAIN*LQGQSS
Trigger: AGAGCTCTGACCTTGGAGTCAATTTATGGCTCCACA...TAGCTTGGCAGTTGACTTTGAGTCCTCCCGTTTCGCTGGGCATTGGCAGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
3UTR-3UTR GCA 90 bp GCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCCTCCGGTTCTGGGAAAGTCATGCTaGAATTGTCATTCCATCAGC +
Preference number: 2 (lower is better)
Translates to: APSVIGALICKSTVGPPVLGKSC*NCHSIS
Trigger: GCTGATGGAATGACAATTGCAGCATGACTTTCCCAG...AACCGGAGGGCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343281.9
ENST00000459716.6
3UTR-3UTR CCA 90 bp CTACCAGCCCAGACGAGTCAAGCCATCCATATTGAGCTGGTTATGCCACCACCCAGGACTACCTGGGCCTaGAAAATGGGAGCATTATTA +
Preference number: 2 (lower is better)
Translates to: LPAQTSQAIHIELVMPPPRTTWA*KMGALL
Trigger: TAATAATGCTCCCATTTTCCAGGCCCAGGTAGTCCT...GGGTGGTGGCATAACCAGCTCAATATGGATGGCTTGACTCGTCTGGGCTGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR TCA 90 bp GCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCCTCCGGTTCTTCTTGCTAACTCTTaGACGTTGAATTTCCAGCGA +
Preference number: 2 (lower is better)
Translates to: APSVIGALICKSTVGPPVLLANS*TLNFQR
Trigger: TCGCTGGAAATTCAACGTTCAAGAGTTAGCAAGAAG...AACCGGAGGGCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
3UTR-3UTR TCA 90 bp GCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCCTCCGGTTTCTCTTGAGACACCATaGATGTTTCTTCTTGCTAAC +
Preference number: 2 (lower is better)
Translates to: APSVIGALICKSTVGPPVSLETP*MFLLAN
Trigger: GTTAGCAAGAAGAAACATTCATGGTGTCTCAAGAGA...AACCGGAGGGCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
3UTR-3UTR GCA 90 bp GCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCCTCCGGTTATAGTTATTTTCAAGTaGCATGACTGCATAGGGCTT +
Preference number: 2 (lower is better)
Translates to: APSVIGALICKSTVGPPVIVIFK*HDCIGL
Trigger: AAGCCCTATGCAGTCATGGCACTTGAAAATAACTAT...AACCGGAGGGCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
3UTR-3UTR TCA 90 bp CCACCACTTCTCTCCACCTTCCCAACTTTACCGATGGAGATGAATTTCCTGAAAAAAAATCATCCGTGCTaGAAATCAGGGCCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: PPLLSTFPTLPMEMNFLKKNHPC*KSGPWE
Trigger: TTCCCAGGGCCCTGATTTTCAGCACGGATGATTTTT...TTTCAGGAAATTCATCTCCATCGGTAAAGTTGGGAAGGTGGAGAGAAGTGGTGG
47% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343281.9
ENST00000459716.6
3UTR-3UTR TCA 90 bp GGGGTGCCTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTAATTACACACCAGGAAGTCAGGATTaGACTCATAGGCACCATCTT +
Preference number: 2 (lower is better)
Translates to: GVPNFLHSQTFELPTNYTPGSQD*THRHHL
Trigger: AAGATGGTGCCTATGAGTTCAATCCTGACTTCCTGG...TGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459716.6
ENST00000635178.1
3UTR-3UTR TCA 90 bp CTGAGCTGTGGCCCATTTCCTCGCTTACGTCCCAGACTTTTCTATAAACACACACACAGAGGGGTTGGGTaGAAAGCAAAACTAGTGAAT +
Preference number: 2 (lower is better)
Translates to: LSCGPFPRLRPRLFYKHTHRGVG*KAKLVN
Trigger: ATTCACTAGTTTTGCTTTTCACCCAACCCCTCTGTG...TGTGTGTTTATAGAAAAGTCTGGGACGTAAGCGAGGAAATGGGCCACAGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464470.1
3UTR-3UTR GCA 90 bp CCACTTCTCCATAGTGGTCACTCACTTAACCCAAGTGAGCCAAAAACCCTAAAGACCTATATCCTGGGGTaGCTAATTTCTTGCACTCCC +
Preference number: 2 (lower is better)
Translates to: PLLHSGHSLNPSEPKTLKTYILG*LISCTP
Trigger: GGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGT...CTTTAGGGTTTTTGGCTCACTTGGGTTAAGTGAGTGACCACTATGGAGAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
3UTR-3UTR CCA 90 bp CCACTTCTCCATAGTGGTCACTCACTTAACCCAAGTGAGCCAAAAACCCTAAAGCCATCCATATTGAGCTaGTTATGCCACCACCCTATC +
Preference number: 2 (lower is better)
Translates to: PLLHSGHSLNPSEPKTLKPSILS*LCHHPI
Trigger: GATAGGGTGGTGGCATAACCAGCTCAATATGGATGG...CTTTAGGGTTTTTGGCTCACTTGGGTTAAGTGAGTGACCACTATGGAGAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR TCA 90 bp CCACTTCTCCATAGTGGTCACTCACTTAACCCAAGTGAGCCAAAAACCCTAAAGTTATATATCCCTGTATaGCCTATATCCTGGGGTGCC +
Preference number: 2 (lower is better)
Translates to: PLLHSGHSLNPSEPKTLKLYIPV*PISWGA
Trigger: GGCACCCCAGGATATAGGTCATACAGGGATATATAA...CTTTAGGGTTTTTGGCTCACTTGGGTTAAGTGAGTGACCACTATGGAGAAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
3UTR-3UTR GCA 90 bp ATGAAGCACACTGTGAAAAGTAACATCGTGTTCATACCGTTCTTTCATTCGGTGTTGGGCTGTCTGTGCTaGTTAAATGGGAAGGCGGCT +
Preference number: 2 (lower is better)
Translates to: MKHTVKSNIVFIPFFHSVLGCLC*LNGKAA
Trigger: AGCCGCCTTCCCATTTAAGCAGCACAGACAGCCCAA...CACCGAATGAAAGAACGGTATGAACACGATGTTACTTTTCACAGTGTGCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343281.9
3UTR-3UTR CCA 90 bp GTAATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAGTGGGCCCTCCGGTTTaGAAACTCTGTGTAGGAATT +
Preference number: 2 (lower is better)
Translates to: VMSMAFIYPCMTYILGCLVGPPV*KLCVGI
Trigger: AATTCCTACACAGAGTTTCCAAACCGGAGGGCCCAC...TAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR GCA 90 bp CCACCACTTCTCTCCACCTTCCCAACTTTACCGATGGAGATGAATTTCCTGAAATCTGCTTGGCTTTTCTaGATGAAGCACACTGTGAAA +
Preference number: 2 (lower is better)
Translates to: PPLLSTFPTLPMEMNFLKSAWLF*MKHTVK
Trigger: TTTCACAGTGTGCTTCATGCAGAAAAGCCAAGCAGA...TTTCAGGAAATTCATCTCCATCGGTAAAGTTGGGAAGGTGGAGAGAAGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR GCA 90 bp TTATGTAACCCAGAGCCACTTCTCCATAGTGGTCACTCACTTAACCCAAGTGAGTCTGCTTGGCTTTTCTaGATGAAGCACACTGTGAAA +
Preference number: 2 (lower is better)
Translates to: LCNPEPLLHSGHSLNPSESAWLF*MKHTVK
Trigger: TTTCACAGTGTGCTTCATGCAGAAAAGCCAAGCAGA...CTCACTTGGGTTAAGTGAGTGACCACTATGGAGAAGTGGCTCTGGGTTACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR GCA 90 bp GAAAACATTACACATGGTGTTGGTAGTCATGGAGATGTCGAGCAGGTTTCAGTAACCTATATCCTGGGGTaGCTAATTTCTTGCACTCCC +
Preference number: 2 (lower is better)
Translates to: ENITHGVGSHGDVEQVSVTYILG*LISCTP
Trigger: GGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGT...TACTGAAACCTGCTCGACATCTCCATGACTACCAACACCATGTGTAATGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
3UTR-3UTR CCA 90 bp AATAGAGAAAATGTGAATTTCCCAGAATCCAACAACACACAGATAACCTTACAGCCTTCCGCTGAGCTGTaGCCCATTTCCTCGCTTACG +
Preference number: 2 (lower is better)
Translates to: NRENVNFPESNNTQITLQPSAEL*PISSLT
Trigger: CGTAAGCGAGGAAATGGGCCACAGCTCAGCGGAAGG...CTGTAAGGTTATCTGTGTGTTGTTGGATTCTGGGAAATTCACATTTTCTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464470.1
3UTR CAA 90 bp ATCTTTGTTTTGTTCACTGATGATTCCCAAGTACCTAGAACACTCTaGTGTGTATGTGGACATTTCCTGGGGATATATACCTCCGGTGGC +
Preference number: 2 (lower is better)
Translates to: IFVLFTDDSQVPRTL*CVCGHFLGIYTSGG
Trigger: GCCACCGGAGGTATATATCCCCAGGAAATGTCCACATACACACAAGAGTGTTCTAGGTACTTGGGAATCATCAGTGAACAAAACAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343281.9
3UTR-3UTR TCA 90 bp ATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGAGTCAAGCCATCCATATTaGGCTGGTTATGCCACCACC +
Preference number: 2 (lower is better)
Translates to: IQVNIGCSKSYTNQKPWESSHPY*AGYATT
Trigger: GGTGGTGGCATAACCAGCTCAATATGGATGGCTTGA...CTCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR GCA 90 bp AGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTTCTACCTATATCCTGGGGTaGCTAATTTCTTGCACTCCC +
Preference number: 2 (lower is better)
Translates to: SMAFIYPCMTYILGCLISTYILG*LISCTP
Trigger: GGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGT...AGAAATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR CCA 90 bp TTTGCCAGTTCTATGAATGATGCAAACAGCGAACACAATACAAGTCAATATTGGATACCCAGGACTACCTaGGCCTGGAAAATGGGAGCA +
Preference number: 2 (lower is better)
Translates to: FASSMNDANSEHNTSQYWIPRTT*AWKMGA
Trigger: TGCTCCCATTTTCCAGGCCCAGGTAGTCCTGGGTAT...CCAATATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR TCA 90 bp GCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGTTGCTCAGAAACTTTTaGGTTCAGCTATTTACACTG +
Preference number: 2 (lower is better)
Translates to: AVGQQEIEHTSSVVLSIMLLRNF*VQLFTL
Trigger: CAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAA...CATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR GCA 90 bp GAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCAGCATCAGACCATGCATAAATGGGAAGGCGGCTaGATCTTTGATCCCAATTTT +
Preference number: 2 (lower is better)
Translates to: EKETVYSNLQNSQHQTMHKWEGG*IFDPNF
Trigger: AAAATTGGGATCAAAGATGCAGCCGCCTTCCCATTT...ATGCATGGTCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343281.9
3UTR-3UTR CCA 90 bp AACGTTGAATTTCCAGCGAGTGTCAGGTTCTCGGAATATAACTTCATAGTTATTCCAGTTCTATCTTTATaGTGGTCAGGAGCCTCTGGC +
Preference number: 2 (lower is better)
Translates to: NVEFPASVRFSEYNFIVIPVLSL*WSGASG
Trigger: GCCAGAGGCTCCTGACCACCATAAAGATAGAACTGG...AATAACTATGAAGTTATATTCCGAGAACCTGACACTCGCTGGAAATTCAACGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343281.9
3UTR-3UTR CCA 90 bp AATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGAGTGGGCCCTCCGGTTTaGAAACTCTGTGTAGGAATT +
Preference number: 2 (lower is better)
Translates to: NTSQYWVFKELHKSEAMGVGPPV*KLCVGI
Trigger: AATTCCTACACAGAGTTTCCAAACCGGAGGGCCCAC...TCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR CCA 90 bp TTTGCCAGTTCTATGAATGATGCAAACAGCGAACACAATACAAGTCAATATTGGTTTGTAAATCCACCGTaGGCCCTCCGGTTTGGAAAC +
Preference number: 2 (lower is better)
Translates to: FASSMNDANSEHNTSQYWFVNPP*ALRFGN
Trigger: GTTTCCAAACCGGAGGGCCCACGGTGGATTTACAAA...CCAATATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR CCA 90 bp CACAAATCAGAAGCCATGGGAGTTGAAAAACAGATCACTTCTACAGGGGATAAAAGGACTACCTGGGCCTaGAAAATGGGAGCATTATTA +
Preference number: 2 (lower is better)
Translates to: HKSEAMGVEKQITSTGDKRTTWA*KMGALL
Trigger: TAATAATGCTCCCATTTTCCAGGCCCAGGTAGTCCT...TTTATCCCCTGTAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCTGATTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR TCA 90 bp GAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCAGCATCAGACCATGCATAGGCGGCTGCATCTTTaGTCCCAATTTTTAAATTTC +
Preference number: 2 (lower is better)
Translates to: EKETVYSNLQNSQHQTMHRRLHL*SQFLNF
Trigger: GAAATTTAAAAATTGGGATCAAAGATGCAGCCGCCT...ATGCATGGTCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343281.9
3UTR-3UTR TCA 90 bp AGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCAGCATCAGACCATGCATACCGGTGGCATACCTGTaGAATCCTTTGCTTATTTTT +
Preference number: 2 (lower is better)
Translates to: RKRLFTQICRIPSIRPCIPVAYL*NPLLIF
Trigger: AAAAATAAGCAAAGGATTTCACAGGTATGCCACCGG...TATGCATGGTCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343281.9
3UTR-3UTR GCA 90 bp TGCACTCCCAAACATTTGAGCTGCCGACTAATTACACATGTTAATAGGCATAATTTCAAGTGCCATGACTaGATAGGGCTTCATTTCCCA +
Preference number: 2 (lower is better)
Translates to: CTPKHLSCRLITHVNRHNFKCHD*IGLHFP
Trigger: TGGGAAATGAAGCCCTATGCAGTCATGGCACTTGAA...ATTATGCCTATTAACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459716.6
ENST00000635178.1
3UTR-3UTR GCA 90 bp AGTGTCTACTTTGAAGGACAATGTTCCCTTAGATGTATGCTTTCTGGCATATTAACCTATATCCTGGGGTaGCTAATTTCTTGCACTCCC +
Preference number: 2 (lower is better)
Translates to: SVYFEGQCSLRCMLSGILTYILG*LISCTP
Trigger: GGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGT...TAATATGCCAGAAAGCATACATCTAAGGGAACATTGTCCTTCAAAGTAGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR CCA 90 bp CTCTTGAACGTTGAATTTCCAGCGAGTGTCAGGTTCTCGGAATATAACTTCATAGATATATACCTCCGGTaGCATACCTGTGAAATCCTT +
Preference number: 2 (lower is better)
Translates to: LLNVEFPASVRFSEYNFIDIYLR*HTCEIL
Trigger: AAGGATTTCACAGGTATGCCACCGGAGGTATATATC...TATGAAGTTATATTCCGAGAACCTGACACTCGCTGGAAATTCAACGTTCAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343281.9
3UTR-3UTR CCA 90 bp ATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTAGGAATTCCAGTATCTaGCATTGTTGGAAGGCAATG +
Preference number: 2 (lower is better)
Translates to: MSMAFIYPCMTYILGCLIRNSSI*HCWKAM
Trigger: CATTGCCTTCCAACAATGCCAGATACTGGAATTCCT...AATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR TCA 90 bp TGCCTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTAATTACACATGTTTATTTTCAAGTGCCATaGCTGCATAGGGCTTCATTT +
Preference number: 2 (lower is better)
Translates to: CLISCTPKHLSCRLITHVYFQVP*LHRASF
Trigger: AAATGAAGCCCTATGCAGTCATGGCACTTGAAAATA...AACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459716.6
ENST00000635178.1
3UTR-3UTR TCA 90 bp GTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATCTGATTCCAACCTGTTCTCTTGAGACACCATaGATGTTTCTTCTTGCTAAC +
Preference number: 2 (lower is better)
Translates to: VLCGLVYHDLTLNLIPTCSLETP*MFLLAN
Trigger: GTTAGCAAGAAGAAACATTCATGGTGTCTCAAGAGA...ACAGGTTGGAATCAGATTTAATGTGAGATCATGATAGACAAGACCACAGAGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459716.6
ENST00000635178.1
3UTR-3UTR TCA 90 bp ATGCAAACAGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACATTATATATCCCTGTATaGCCTATATCCTGGGGTGCC +
Preference number: 2 (lower is better)
Translates to: MQTANTIQVNIGCSKSYTLYIPV*PISWGA
Trigger: GGCACCCCAGGATATAGGTCATACAGGGATATATAA...TGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCTGTTTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
3UTR-3UTR TCA 90 bp GTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATCTGATTCCAACCTGTGACATTCCAGAGTTGTaGGGACTTGATTGTCTTAAT +
Preference number: 2 (lower is better)
Translates to: VLCGLVYHDLTLNLIPTCDIPEL*GLDCLN
Trigger: ATTAAGACAATCAAGTCCTCACAACTCTGGAATGTC...ACAGGTTGGAATCAGATTTAATGTGAGATCATGATAGACAAGACCACAGAGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR GCA 90 bp AGTGTCTACTTTGAAGGACAATGTTCCCTTAGATGTATGCTTTCTGGCATATTACTGGGAAAGTCATGCTaGAATTGTCATTCCATCAGC +
Preference number: 2 (lower is better)
Translates to: SVYFEGQCSLRCMLSGILLGKSC*NCHSIS
Trigger: GCTGATGGAATGACAATTGCAGCATGACTTTCCCAG...TAATATGCCAGAAAGCATACATCTAAGGGAACATTGTCCTTCAAAGTAGACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459716.6
3UTR-3UTR GCA 90 bp AGTGTCTACTTTGAAGGACAATGTTCCCTTAGATGTATGCTTTCTGGCATATTAGGGTGCCTAATTTCTTaGACTCCCAAACATTTGAGC +
Preference number: 2 (lower is better)
Translates to: SVYFEGQCSLRCMLSGILGCLIS*TPKHLS
Trigger: GCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCC...TAATATGCCAGAAAGCATACATCTAAGGGAACATTGTCCTTCAAAGTAGACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR GCA 90 bp ACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATAAAACATCAACTGGGTGCCTAATTTCTTaGACTCCCAAACATTTGAGC +
Preference number: 2 (lower is better)
Translates to: TFQSCEDLIVLMPHKTSTGCLIS*TPKHLS
Trigger: GCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCC...AGTTGATGTTTTATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR CAA 90 bp ATGACCTATATCCTGGGGTGCCTAATTTCTTGCACTCCCAAACATTaGAGCTGCCGACTAATTACACATGTTAATAGGCATAATTTTAGA +
Preference number: 2 (lower is better)
Translates to: MTYILGCLISCTPKH*SCRLITHVNRHNFR
Trigger: TCTAAAATTATGCCTATTAACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR CAA 90 bp AAAGCAAAACTAGTGAATGGTAGAGCTTGGATGTGGAGCCATAAATaGACTCCAAGGTCAGAGCTCTTTAACATAGCCATTATTAGCAAA +
Preference number: 2 (lower is better)
Translates to: KAKLVNGRAWMWSHK*TPRSELFNIAIISK
Trigger: TTTGCTAATAATGGCTATGTTAAAGAGCTCTGACCTTGGAGTCAATTTATGGCTCCACATCCAAGCTCTACCATTCACTAGTTTTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464470.1
3UTR-3UTR TCA 90 bp TGGTTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATCTAACTCTTGAACGTTaGATTTCCAGCGAGTGTCAG +
Preference number: 2 (lower is better)
Translates to: WFQILTLEKETVYSNLQNLTLER*ISSECQ
Trigger: CTGACACTCGCTGGAAATTCAACGTTCAAGAGTTAG...ATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
3UTR-3UTR TCA 90 bp AAGAAGACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATAAAACACTTCTTGCTAACTCTTaGACGTTGAATTTCCAGCGA +
Preference number: 2 (lower is better)
Translates to: KKTFQSCEDLIVLMPHKTLLANS*TLNFQR
Trigger: TCGCTGGAAATTCAACGTTCAAGAGTTAGCAAGAAG...TGTTTTATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGTCTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459716.6
ENST00000635178.1
3UTR-3UTR GCA 90 bp AGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGGGTGCCTAATTTCTTaGACTCCCAAACATTTGAGC +
Preference number: 2 (lower is better)
Translates to: SEHNTSQYWVFKELHKSEGCLIS*TPKHLS
Trigger: GCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCC...TTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
3UTR-3UTR GCA 90 bp AATAGAGAAAATGTGAATTTCCCAGAATCCAACAACACACAGATAACCTTACAGGGACTCAAAGTCAACTaGCAAGCTACCTTCTTCACT +
Preference number: 2 (lower is better)
Translates to: NRENVNFPESNNTQITLQGLKVN*QATFFT
Trigger: AGTGAAGAAGGTAGCTTGGCAGTTGACTTTGAGTCC...CTGTAAGGTTATCTGTGTGTTGTTGGATTCTGGGAAATTCACATTTTCTCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464470.1
3UTR CAA 90 bp AATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGAGTaGAAAAACAGATCACTTCTACAGGGGATAAAGTTGATGGCATTT +
Preference number: 2 (lower is better)
Translates to: NIGCSKSYTNQKPWE*KNRSLLQGIKLMAF
Trigger: AAATGCCATCAACTTTATCCCCTGTAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR TCA 90 bp CAATCATTTAATGAGACCCTATTGCCCATAAAGAGCATTTGCCAGTTCTATGAAGACATTCCAGAGTTGTaGGGACTTGATTGTCTTAAT +
Preference number: 2 (lower is better)
Translates to: QSFNETLLPIKSICQFYEDIPEL*GLDCLN
Trigger: ATTAAGACAATCAAGTCCTCACAACTCTGGAATGTC...TTCATAGAACTGGCAAATGCTCTTTATGGGCAATAGGGTCTCATTAAATGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
3UTR-3UTR TCA 90 bp AAGAAGACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATAAAACAGACATTCCAGAGTTGTaGGGACTTGATTGTCTTAAT +
Preference number: 2 (lower is better)
Translates to: KKTFQSCEDLIVLMPHKTDIPEL*GLDCLN
Trigger: ATTAAGACAATCAAGTCCTCACAACTCTGGAATGTC...TGTTTTATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGTCTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR GCA 90 bp CATTTTGTAATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGATAGTTATTTTCAAGTaGCATGACTGCATAGGGCTT +
Preference number: 2 (lower is better)
Translates to: HFVMSMAFIYPCMTYILGIVIFK*HDCIGL
Trigger: AAGCCCTATGCAGTCATGGCACTTGAAAATAACTAT...CCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCATTACAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000459716.6
ENST00000635178.1
3UTR-3UTR GCA 90 bp TGGTTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCTGCTTGGCTTTTCTaGATGAAGCACACTGTGAAA +
Preference number: 2 (lower is better)
Translates to: WFQILTLEKETVYSNLQNSAWLF*MKHTVK
Trigger: TTTCACAGTGTGCTTCATGCAGAAAAGCCAAGCAGA...ATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR CCA 90 bp AAGAAGACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATAAAACAGCATTATTCCTGTCCTaGTTTCTGTTCATTCTGCTT +
Preference number: 2 (lower is better)
Translates to: KKTFQSCEDLIVLMPHKTALFLS*FLFILL
Trigger: AAGCAGAATGAACAGAAACCAGGACAGGAATAATGC...TGTTTTATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGTCTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR CCA 90 bp CACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGCATTATTCCTGTCCTaGTTTCTGTTCATTCTGCTT +
Preference number: 2 (lower is better)
Translates to: HNTSQYWVFKELHKSEAMALFLS*FLFILL
Trigger: AAGCAGAATGAACAGAAACCAGGACAGGAATAATGC...CATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR TCA 90 bp GCATTTGCCAGTTCTATGAATGATGCAAACAGCGAACACAATACAAGTCAATATTTGCTCAGAAACTTTTaGGTTCAGCTATTTACACTG +
Preference number: 2 (lower is better)
Translates to: AFASSMNDANSEHNTSQYLLRNF*VQLFTL
Trigger: CAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAA...ATATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCAAATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
3UTR-3UTR TCA 90 bp TTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCTCTCTTGAGACACCATaGATGTTTCTTCAGAGATTC +
Preference number: 2 (lower is better)
Translates to: FQILTLEKETVYSNLQNSSLETP*MFLQRF
Trigger: GAATCTCTGAAGAAACATTCATGGTGTCTCAAGAGA...GGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635608.1
3UTR-3UTR CCA 90 bp CAAACAGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATAGTATCTGGCATTGTTaGAAGGCAATGCATTATTCC +
Preference number: 2 (lower is better)
Translates to: QTANTIQVNIGCSKSYTNSIWHC*KAMHYS
Trigger: GGAATAATGCATTGCCTTCCAACAATGCCAGATACT...ATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCTGTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR TCA 90 bp TGGTTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATTTGCTCAGAAACTTTTaGGTTCAGCTATTTACACTG +
Preference number: 2 (lower is better)
Translates to: WFQILTLEKETVYSNLQNLLRNF*VQLFTL
Trigger: CAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAA...ATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR TCA 72 bp CCACCATTCCATCCTCACCACCGGCCTCCCTTCCGCTaGGCTGTGGCCCATTTCCTCGCTTACGTCCCAGAC +
Preference number: 3 (lower is better)
Translates to: PPFHPHHRPPFR*AVAHFLAYVPD
Trigger: GTCTGGGACGTAAGCGAGGAAATGGGCCACAGCTCAGCGGAAGGGAGGCCGGTGGTGAGGATGGAATGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
3UTR CCA 72 bp TCCATCCTCACCACCGGCCTCCCTTCCGCTGAGCTGTaGCCCATTTCCTCGCTTACGTCCCAGACTTTTCTA +
Preference number: 3 (lower is better)
Translates to: SILTTGLPSAEL*PISSLTSQTFL
Trigger: TAGAAAAGTCTGGGACGTAAGCGAGGAAATGGGCCACAGCTCAGCGGAAGGGAGGCCGGTGGTGAGGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464470.1
3UTR GCA 72 bp CCAATGCCCAGCGAAACGGGAGGACTCAAAGTCAACTaGCAAGCTACCTTCTTCACTCCAGAGCCAGGATCC +
Preference number: 3 (lower is better)
Translates to: PMPSETGGLKVN*QATFFTPEPGS
Trigger: GGATCCTGGCTCTGGAGTGAAGAAGGTAGCTTGGCAGTTGACTTTGAGTCCTCCCGTTTCGCTGGGCATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
3UTR-3UTR CAA 90 bp GAACTGCCAATGCCCAGCGAAACGGGAGGACTCAAAGTCAACTGCCAAGCTACCATGTGGAGCCATAAATaGACTCCAAGGTCAGAGCTC +
Preference number: 3 (lower is better)
Translates to: ELPMPSETGGLKVNCQATMWSHK*TPRSEL
Trigger: GAGCTCTGACCTTGGAGTCAATTTATGGCTCCACAT...GGTAGCTTGGCAGTTGACTTTGAGTCCTCCCGTTTCGCTGGGCATTGGCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
3UTR TCA 72 bp CCCTCTACCAGCCCAGACGAGTCAAGCCATCCATATTaGGCTGGTTATGCCACCACCCTATCAACCAAGATA +
Preference number: 3 (lower is better)
Translates to: PSTSPDESSHPY*AGYATTLSTKI
Trigger: TATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGATGGCTTGACTCGTCTGGGCTGGTAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR GCA 72 bp CCCAGACGAGTCAAGCCATCCATATTGAGCTGGTTATaGCACCACCCTATCAACCAAGATACCCAGGACTAC +
Preference number: 3 (lower is better)
Translates to: PRRVKPSILSWL*HHPINQDTQDY
Trigger: GTAGTCCTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGATGGCTTGACTCGTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR CCA 72 bp TACCAGCCCAGACGAGTCAAGCCATCCATATTGAGCTaGTTATGCCACCACCCTATCAACCAAGATACCCAG +
Preference number: 3 (lower is better)
Translates to: YQPRRVKPSILS*LCHHPINQDTQ
Trigger: CTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGATGGCTTGACTCGTCTGGGCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR TCA 72 bp ACCTTCTTCACTCCAGAGCCAGGATCCAGGGAACACTaGAGATTTATCTCAGCTGACCAACAACGGAGCAGT +
Preference number: 3 (lower is better)
Translates to: TFFTPEPGSREH*RFISADQQRSS
Trigger: ACTGCTCCGTTGTTGGTCAGCTGAGATAAATCTTCAGTGTTCCCTGGATCCTGGCTCTGGAGTGAAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
3UTR CCA 72 bp AGCCCCAGTTCTATCTTTATGGTGGTCAGGAGCCTCTaGCACATAAGGTCCACAAGGGCAGGATCTTTGTTT +
Preference number: 3 (lower is better)
Translates to: SPSSIFMVVRSL*HIRSTRAGSLF
Trigger: AAACAAAGATCCTGCCCTTGTGGACCTTATGTGCCAGAGGCTCCTGACCACCATAAAGATAGAACTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343281.9
3UTR-3UTR CAA 90 bp CTCCATAGTGGTCACTCACTTAACCCAAGTGAGCCAAAAACCCTAAAGCAGGGAGTCAAGCCATCCATATaGAGCTGGTTATGCCACCAC +
Preference number: 3 (lower is better)
Translates to: LHSGHSLNPSEPKTLKQGVKPSI*SWLCHH
Trigger: GTGGTGGCATAACCAGCTCAATATGGATGGCTTGAC...TCCCTGCTTTAGGGTTTTTGGCTCACTTGGGTTAAGTGAGTGACCACTATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR CCA 72 bp GCTCTCATTTGTAAATCCACCGTGGGCCCTCCGGTTTaGAAACTCTGTGTAGGAATTCCAGTATCTGGCATT +
Preference number: 3 (lower is better)
Translates to: ALICKSTVGPPV*KLCVGIPVSGI
Trigger: AATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGTGGATTTACAAATGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
3UTR CCA 72 bp GCCACCACCCTATCAACCAAGATACCCAGGACTACCTaGGCCTGGAAAATGGGAGCATTATTAAGTAGATCA +
Preference number: 3 (lower is better)
Translates to: ATTLSTKIPRTT*AWKMGALLSRS
Trigger: TGATCTACTTAATAATGCTCCCATTTTCCAGGCCCAGGTAGTCCTGGGTATCTTGGTTGATAGGGTGGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR CAA 90 bp GCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCCTCCGGTTAAGGCGGCTGCATCTTaGATCCCAATTTTTAAATTT +
Preference number: 3 (lower is better)
Translates to: APSVIGALICKSTVGPPVKAAAS*IPIFKF
Trigger: AAATTTAAAAATTGGGATCAAAGATGCAGCCGCCTT...AACCGGAGGGCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343281.9
3UTR-3UTR CAA 90 bp CCACCACTTCTCTCCACCTTCCCAACTTTACCGATGGAGATGAATTTCCTGAAAAGGAAAACTGTCACTTaGGGCTGTCTGTGCTGCTTA +
Preference number: 3 (lower is better)
Translates to: PPLLSTFPTLPMEMNFLKRKTVT*GCLCCL
Trigger: TAAGCAGCACAGACAGCCCAAAGTGACAGTTTTCCT...TTTCAGGAAATTCATCTCCATCGGTAAAGTTGGGAAGGTGGAGAGAAGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343281.9
3UTR-3UTR CAA 90 bp GTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATCTGATTCCAACCTGTCGTGGGCCCTCCGGTTaGGAAACTCTGTGTAGGAAT +
Preference number: 3 (lower is better)
Translates to: VLCGLVYHDLTLNLIPTCRGPSG*ETLCRN
Trigger: ATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACG...ACAGGTTGGAATCAGATTTAATGTGAGATCATGATAGACAAGACCACAGAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR CAA 90 bp GTGCTTGGAGATACAGAAGTTAGCAAAGCTGATAACACCTTAGATTCATTGGGACGTGGGCCCTCCGGTTaGGAAACTCTGTGTAGGAAT +
Preference number: 3 (lower is better)
Translates to: VLGDTEVSKADNTLDSLGRGPSG*ETLCRN
Trigger: ATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACG...TCCCAATGAATCTAAGGTGTTATCAGCTTTGCTAACTTCTGTATCTCCAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR CAA 90 bp ACACATGGTGTTGGTAGTCATGGAGATGTCGAGCAGGTTTCAGTAGTGTCAGATAGTAGCAATGGCACTTaGATAAGTAGCAATGCCCCC +
Preference number: 3 (lower is better)
Translates to: THGVGSHGDVEQVSVVSDSSNGT*ISSNAP
Trigger: GGGGGCATTGCTACTTATCAAAGTGCCATTGCTACT...ATCTGACACTACTGAAACCTGCTCGACATCTCCATGACTACCAACACCATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
3UTR-3UTR CAA 90 bp CCACTTCTCCATAGTGGTCACTCACTTAACCCAAGTGAGCCAAAAACCCTAAAGGGGGTGCCTAATTTCTaGCACTCCCAAACATTTGAG +
Preference number: 3 (lower is better)
Translates to: PLLHSGHSLNPSEPKTLKGVPNF*HSQTFE
Trigger: CTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCC...CTTTAGGGTTTTTGGCTCACTTGGGTTAAGTGAGTGACCACTATGGAGAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
3UTR TCA 72 bp AGCCAGCCAAGTCAGGAGGGCTTGAATCTGGTCCTTTaGACCGCTCATGTGAAATCAAAGGATGGTAATTTC +
Preference number: 3 (lower is better)
Translates to: SQPSQEGLNLVL*TAHVKSKDGNF
Trigger: GAAATTACCATCCTTTGATTTCACATGAGCGGTTCAAAGGACCAGATTCAAGCCCTCCTGACTTGGCTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR CAA 90 bp TATGTAACCCAGAGCCACTTCTCCATAGTGGTCACTCACTTAACCCAAGTGAGCCAGAGTTGTGAGGACTaGATTGTCTTAATGCCACAT +
Preference number: 3 (lower is better)
Translates to: YVTQSHFSIVVTHLTQVSQSCED*IVLMPH
Trigger: ATGTGGCATTAAGACAATCAAGTCCTCACAACTCTG...GCTCACTTGGGTTAAGTGAGTGACCACTATGGAGAAGTGGCTCTGGGTTACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
3UTR-3UTR CAA 90 bp GAAAAGTTATGTAACCCAGAGCCACTTCTCCATAGTGGTCACTCACTTAACCCAACATTACACATGGTGTaGGTAGTCATGGAGATGTCG +
Preference number: 3 (lower is better)
Translates to: EKLCNPEPLLHSGHSLNPTLHMV*VVMEMS
Trigger: CGACATCTCCATGACTACCAACACCATGTGTAATGT...TGGGTTAAGTGAGTGACCACTATGGAGAAGTGGCTCTGGGTTACATAACTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR CAA 90 bp AAGTTATGTAACCCAGAGCCACTTCTCCATAGTGGTCACTCACTTAACCCAAGTCTTGAATCTGGTCCTTaGAACCGCTCATGTGAAATC +
Preference number: 3 (lower is better)
Translates to: KLCNPEPLLHSGHSLNPSLESGP*NRSCEI
Trigger: GATTTCACATGAGCGGTTCAAAGGACCAGATTCAAG...ACTTGGGTTAAGTGAGTGACCACTATGGAGAAGTGGCTCTGGGTTACATAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR GCA 72 bp CCTGTCCTGGTTTCTGTTCATTCTGCTTGGCTTTTCTaGATGAAGCACACTGTGAAAAGTAACATCGTGTTC +
Preference number: 3 (lower is better)
Translates to: PVLVSVHSAWLF*MKHTVKSNIVF
Trigger: GAACACGATGTTACTTTTCACAGTGTGCTTCATGCAGAAAAGCCAAGCAGAATGAACAGAAACCAGGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
3UTR CCA 72 bp TCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTaGCATTGTTGGAAGGCAATGCATTATTCCTGTCCT +
Preference number: 3 (lower is better)
Translates to: SGLETLCRNSSI*HCWKAMHYSCP
Trigger: AGGACAGGAATAATGCATTGCCTTCCAACAATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
3UTR CCA 72 bp ACCCTATCAACCAAGATACCCAGGACTACCTGGGCCTaGAAAATGGGAGCATTATTAAGTAGATCATTAGGA +
Preference number: 3 (lower is better)
Translates to: TLSTKIPRTTWA*KMGALLSRSLG
Trigger: TCCTAATGATCTACTTAATAATGCTCCCATTTTCCAGGCCCAGGTAGTCCTGGGTATCTTGGTTGATAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR CAA 90 bp GTAATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTATGCACTCCCAAACATTaGAGCTGCCGACTAATTACA +
Preference number: 3 (lower is better)
Translates to: VMSMAFIYPCMTYILGCLCTPKH*SCRLIT
Trigger: TGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA...TAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR CAA 90 bp GAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTTCTGCACTCCCAAACATTaGAGCTGCCGACTAATTACA +
Preference number: 3 (lower is better)
Translates to: EHGFYISLYDLYPGVPNFCTPKH*SCRLIT
Trigger: TGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA...GAAATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR GCA 72 bp GCTTTTATATATCCCTGTATGACCTATATCCTGGGGTaGCTAATTTCTTGCACTCCCAAACATTTGAGCTGC +
Preference number: 3 (lower is better)
Translates to: AFIYPCMTYILG*LISCTPKHLSC
Trigger: GCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR CAA 90 bp TTTGTAATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCCCAAAGTGTCTACTTaGAAGGACAATGTTCCCTTA +
Preference number: 3 (lower is better)
Translates to: FVMSMAFIYPCMTYILGCPKVST*KDNVPL
Trigger: TAAGGGAACATTGTCCTTCAAAGTAGACACTTTGGG...GCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCATTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR CAA 90 bp TGCCTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTAATTACACATGTTCCCAAAGTGTCTACTTaGAAGGACAATGTTCCCTTA +
Preference number: 3 (lower is better)
Translates to: CLISCTPKHLSCRLITHVPKVST*KDNVPL
Trigger: TAAGGGAACATTGTCCTTCAAAGTAGACACTTTGGG...AACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR CAA 90 bp ATTCAGCAATCATTTAATGAGACCCTATTGCCCATAAAGAGCATTTGCCAGTTCTGCACTCCCAAACATTaGAGCTGCCGACTAATTACA +
Preference number: 3 (lower is better)
Translates to: IQQSFNETLLPIKSICQFCTPKH*SCRLIT
Trigger: TGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA...GAACTGGCAAATGCTCTTTATGGGCAATAGGGTCTCATTAAATGATTGCTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380130.7
ENST00000380139.8
3UTR-3UTR CAA 90 bp CACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGGGTGCCTAATTTCTaGCACTCCCAAACATTTGAG +
Preference number: 3 (lower is better)
Translates to: HNTSQYWVFKELHKSEAMGVPNF*HSQTFE
Trigger: CTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCC...CATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
3UTR-3UTR CAA 90 bp GTCTACTTTGAAGGACAATGTTCCCTTAGATGTATGCTTTCTGGCATATTAACAGGGGTGCCTAATTTCTaGCACTCCCAAACATTTGAG +
Preference number: 3 (lower is better)
Translates to: VYFEGQCSLRCMLSGILTGVPNF*HSQTFE
Trigger: CTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCC...TGTTAATATGCCAGAAAGCATACATCTAAGGGAACATTGTCCTTCAAAGTAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR CAA 90 bp GAAAAGTTATGTAACCCAGAGCCACTTCTCCATAGTGGTCACTCACTTAACCCAGGAGATTATTTTATGTaGTGCTTGGAGATACAGAAG +
Preference number: 3 (lower is better)
Translates to: EKLCNPEPLLHSGHSLNPGDYFM*CLEIQK
Trigger: CTTCTGTATCTCCAAGCACAACATAAAATAATCTCC...TGGGTTAAGTGAGTGACCACTATGGAGAAGTGGCTCTGGGTTACATAACTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR CAA 90 bp TTAGAAAGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTTTTTCTTGCTCTTTTTaGGTTCCATTCATGAGCTTC +
Preference number: 3 (lower is better)
Translates to: LERSCWPTRNRAYVLCGLFSCSF*VPFMSF
Trigger: GAAGCTCATGAATGGAACCAAAAAAGAGCAAGAAAA...AAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCTTTCTAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000459716.6
ENST00000635178.1
3UTR-3UTR CAA 90 bp AAGAAGACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATAAAACATGCACTCCCAAACATTaGAGCTGCCGACTAATTACA +
Preference number: 3 (lower is better)
Translates to: KKTFQSCEDLIVLMPHKTCTPKH*SCRLIT
Trigger: TGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA...TGTTTTATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGTCTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR CAA 90 bp TTTGCCAGTTCTATGAATGATGCAAACAGCGAACACAATACAAGTCAATATTGGTGCACTCCCAAACATTaGAGCTGCCGACTAATTACA +
Preference number: 3 (lower is better)
Translates to: FASSMNDANSEHNTSQYWCTPKH*SCRLIT
Trigger: TGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA...CCAATATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
3UTR-3UTR CAA 90 bp TGGTTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATGGGGTGCCTAATTTCTaGCACTCCCAAACATTTGAG +
Preference number: 3 (lower is better)
Translates to: WFQILTLEKETVYSNLQNGVPNF*HSQTFE
Trigger: CTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCC...ATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR CAA 90 bp AGCAAAGCTGATAACACCTTAGATTCATTGGGATTTACTATTGTCAGCCAAACTACATTACACATGGTGTaGGTAGTCATGGAGATGTCG +
Preference number: 3 (lower is better)
Translates to: SKADNTLDSLGFTIVSQTTLHMV*VVMEMS
Trigger: CGACATCTCCATGACTACCAACACCATGTGTAATGT...AGTTTGGCTGACAATAGTAAATCCCAATGAATCTAAGGTGTTATCAGCTTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR CAA 90 bp TTAGAAAGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTCATTGGGATTTACTATaGTCAGCCAAACTTACTCAA +
Preference number: 3 (lower is better)
Translates to: LERSCWPTRNRAYVLCGLHWDLL*SAKLTQ
Trigger: TTGAGTAAGTTTGGCTGACAATAGTAAATCCCAATG...AAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCTTTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR CAA 90 bp TTTGCCAGTTCTATGAATGATGCAAACAGCGAACACAATACAAGTCAATATTGGCTTGAATCTGGTCCTTaGAACCGCTCATGTGAAATC +
Preference number: 3 (lower is better)
Translates to: FASSMNDANSEHNTSQYWLESGP*NRSCEI
Trigger: GATTTCACATGAGCGGTTCAAAGGACCAGATTCAAG...CCAATATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR TCA 72 bp GACCCTATTGCCCATAAAGAGCATTTGCCAGTTCTATaGATGATGCAAACAGCGAACACAATACAAGTCAAT +
Preference number: 3 (lower is better)
Translates to: DPIAHKEHLPVL*MMQTANTIQVN
Trigger: ATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCAAATGCTCTTTATGGGCAATAGGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR CAA 90 bp AGTGTCTACTTTGAAGGACAATGTTCCCTTAGATGTATGCTTTCTGGCATATTACCCAAAGTGTCTACTTaGAAGGACAATGTTCCCTTA +
Preference number: 3 (lower is better)
Translates to: SVYFEGQCSLRCMLSGILPKVST*KDNVPL
Trigger: TAAGGGAACATTGTCCTTCAAAGTAGACACTTTGGG...TAATATGCCAGAAAGCATACATCTAAGGGAACATTGTCCTTCAAAGTAGACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR CAA 90 bp CAGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGACAGAGTTGTGAGGACTaGATTGTCTTAATGCCACAT +
Preference number: 3 (lower is better)
Translates to: QRTQYKSILGVQRVTQIRQSCED*IVLMPH
Trigger: ATGTGGCATTAAGACAATCAAGTCCTCACAACTCTG...TCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
3UTR-3UTR CAA 90 bp TTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCCCAAAGTGTCTACTTaGAAGGACAATGTTCCCTTA +
Preference number: 3 (lower is better)
Translates to: FQILTLEKETVYSNLQNSPKVST*KDNVPL
Trigger: TAAGGGAACATTGTCCTTCAAAGTAGACACTTTGGG...GGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR-3UTR CAA 90 bp AGTTCTATGAATGATGCAAACAGCGAACACAATACAAGTCAATATTGGGTGTTCATGGTAATTTCCACTTaGAGCTCTCTGACATTTCTC +
Preference number: 3 (lower is better)
Translates to: SSMNDANSEHNTSQYWVFMVIST*SSLTFL
Trigger: GAGAAATGTCAGAGAGCTCAAAGTGGAAATTACCAT...GAACACCCAATATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR TCA 72 bp CTATTGCCCATAAAGAGCATTTGCCAGTTCTATGAATaGTGCAAACAGCGAACACAATACAAGTCAATATTG +
Preference number: 3 (lower is better)
Translates to: LLPIKSICQFYE*CKQRTQYKSIL
Trigger: CAATATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCAAATGCTCTTTATGGGCAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR CCA 72 bp AATGATGCAAACAGCGAACACAATACAAGTCAATATTaGGTGTTCAAAGAGTTACACAAATCAGAAGCCATG +
Preference number: 3 (lower is better)
Translates to: NDANSEHNTSQY*VFKELHKSEAM
Trigger: CATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCTGTTTGCATCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR-3UTR CAA 90 bp TTTGCCAGTTCTATGAATGATGCAAACAGCGAACACAATACAAGTCAATATTGGGGAGATTATTTTATGTaGTGCTTGGAGATACAGAAG +
Preference number: 3 (lower is better)
Translates to: FASSMNDANSEHNTSQYWGDYFM*CLEIQK
Trigger: CTTCTGTATCTCCAAGCACAACATAAAATAATCTCC...CCAATATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp CACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTGGCATCACCCGCCGGAACCGTaGTGCGTGGGAGGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: HRGPSGLETLCRNSSIWHHPPEP*CVGGGV
Trigger: GACGCCCCCTCCCACGCAGCACGGTTCCGGCGGGTG...ATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS-3UTR CCA 90 bp GAACTGCCAATGCCCAGCGAAACGGGAGGACTCAAAGTCAACTGCCAAGCTACCGAAGGCAGCTCCTGGTaGGCCACACCTGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ELPMPSETGGLKVNCQATEGSSW*ATPEPA
Trigger: GGCAGGCTCAGGTGTGGCCCACCAGGAGCTGCCTTC...GGTAGCTTGGCAGTTGACTTTGAGTCCTCCCGTTTCGCTGGGCATTGGCAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR TCA 90 bp GAACTGCCAATGCCCAGCGAAACGGGAGGACTCAAAGTCAACTGCCAAGCTACCCTGGTGGGCCACACCTaGGCCTGCCTCTCCACCATT +
Preference number: 4 (lower is better)
Translates to: ELPMPSETGGLKVNCQATLVGHT*ACLSTI
Trigger: AATGGTGGAGAGGCAGGCTCAGGTGTGGCCCACCAG...GGTAGCTTGGCAGTTGACTTTGAGTCCTCCCGTTTCGCTGGGCATTGGCAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR GCA 90 bp CCCAGAACTGCCAATGCCCAGCGAAACGGGAGGACTCAAAGTCAACTGCCAAGCATCCACCCCATGGCATaGCAAGGCTGCTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PRTANAQRNGRTQSQLPSIHPMA*QGCSAP
Trigger: GGGAGCAGAGCAGCCTTGGCATGCCATGGGGTGGAT...GCTTGGCAGTTGACTTTGAGTCCTCCCGTTTCGCTGGGCATTGGCAGTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR GCA 90 bp CCCAGAACTGCCAATGCCCAGCGAAACGGGAGGACTCAAAGTCAACTGCCAAGCCTCTGCTCCCAGAACTaGCAATGCCCAGCGAAACGG +
Preference number: 4 (lower is better)
Translates to: PRTANAQRNGRTQSQLPSLCSQN*QCPAKR
Trigger: CCGTTTCGCTGGGCATTGGCAGTTCTGGGAGCAGAG...GCTTGGCAGTTGACTTTGAGTCCTCCCGTTTCGCTGGGCATTGGCAGTTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR CCA 90 bp GCCATCCATATTGAGCTGGTTATGCCACCACCCTATCAACCAAGATACCCAGGACATGGGCAGGAGGGCTaGCTGCGAGAGCCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: AIHIELVMPPPYQPRYPGHGQEG*LREPRV
Trigger: AACCCGGGGCTCTCGCAGCCAGCCCTCCTGCCCATG...TCCTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
CDS-3UTR CCA 90 bp TGTAAATCCACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTACGGAACCGTGCTGCGTaGGAGGGGGCGTCCCTACCT +
Preference number: 4 (lower is better)
Translates to: CKSTVGPPVWKLCVGIPVRNRAA*EGASLP
Trigger: AGGTAGGGACGCCCCCTCCCACGCAGCACGGTTCCG...TACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGTGGATTTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS-3UTR GCA 90 bp CAGAACTGCCAATGCCCAGCGAAACGGGAGGACTCAAAGTCAACTGCCAAGCTAAGACTCCCAGGCCAGTaGTCACTCCAGTCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: QNCQCPAKREDSKSTAKLRLPGQ*SLQSSL
Trigger: CAGGGACGACTGGAGTGAGCACTGGCCTGGGAGTCT...TAGCTTGGCAGTTGACTTTGAGTCCTCCCGTTTCGCTGGGCATTGGCAGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR CCA 90 bp ACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTGGCATTGGAAACTGTCCTCCATaGGCAGGAGGGCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: TVGPPVWKLCVGIPVSGIGNCPP*AGGLAA
Trigger: CGCAGCCAGCCCTCCTGCCCATGGAGGACAGTTTCC...AATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
CDS-3UTR CCA 90 bp AGGGAGCCAGCCAAGTCAGGAGGGCTTGAATCTGGTCCTTTGAACCGCTCATGTTGTTTCCTAAAGCTGTaGCGGCGAGGAGGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: REPAKSGGLESGPLNRSCCFLKL*RRGGVP
Trigger: GGGGACACCTCCTCGCCGCCACAGCTTTAGGAAACA...ACATGAGCGGTTCAAAGGACCAGATTCAAGCCCTCCTGACTTGGCTGGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp CACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTGGCATCCCTACCTGGAAAGCTaGGGACGCTGGGAGACTCAC +
Preference number: 4 (lower is better)
Translates to: HRGPSGLETLCRNSSIWHPYLES*GRWETH
Trigger: GTGAGTCTCCCAGCGTCCCCAGCTTTCCAGGTAGGG...ATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS-3UTR CCA 90 bp CAGAACTGCCAATGCCCAGCGAAACGGGAGGACTCAAAGTCAACTGCCAAGCTATGTTTCCTAAAGCTGTaGCGGCGAGGAGGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: QNCQCPAKREDSKSTAKLCFLKL*RRGGVP
Trigger: GGGGACACCTCCTCGCCGCCACAGCTTTAGGAAACA...TAGCTTGGCAGTTGACTTTGAGTCCTCCCGTTTCGCTGGGCATTGGCAGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR CCA 90 bp GAACTGCCAATGCCCAGCGAAACGGGAGGACTCAAAGTCAACTGCCAAGCTACCACACAATCCACCCCATaGCATGCCAAGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ELPMPSETGGLKVNCQATTQSTP*HAKAAL
Trigger: CAGAGCAGCCTTGGCATGCCATGGGGTGGATTGTGT...GGTAGCTTGGCAGTTGACTTTGAGTCCTCCCGTTTCGCTGGGCATTGGCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR CCA 90 bp GCCCATTTCCTCGCTTACGTCCCAGACTTTTCTATAAACACACAATCCACCCCAGGGGAAGGCAGCTCCTaGTGGGCCACACCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: AHFLAYVPDFSINTQSTPGEGSS*WATPEP
Trigger: AGGCTCAGGTGTGGCCCACCAGGAGCTGCCTTCCCC...TGGGGTGGATTGTGTGTTTATAGAAAAGTCTGGGACGTAAGCGAGGAAATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR TCA 90 bp CTAGTGAATGGTAGAGCTTGGATGTGGAGCCATAAATTGACTCCAAGGTCAGAGCGGCCTCCCTTCCGCTaGGCTGTGGCCCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: LVNGRAWMWSHKLTPRSERPPFR*AVAHFL
Trigger: GAGGAAATGGGCCACAGCTCAGCGGAAGGGAGGCCG...CTCTGACCTTGGAGTCAATTTATGGCTCCACATCCAAGCTCTACCATTCACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR GCA 90 bp CTACCAGCCCAGACGAGTCAAGCCATCCATATTGAGCTGGTTATGCCACCACCCGCCCTGGGAAAGTCATaGTGCAATTGTCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LPAQTSQAIHIELVMPPPALGKS*CNCLAS
Trigger: ACTGGCCAGACAATTGCAGCATGACTTTCCCAGGGC...GGGTGGTGGCATAACCAGCTCAATATGGATGGCTTGACTCGTCTGGGCTGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp TGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCCATGGGCAGGAGGGCTaGCTGCGAGAGCCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: WPTRNRAYVLCGLVYHDLHGQEG*LREPRV
Trigger: AACCCGGGGCTCTCGCAGCCAGCCCTCCTGCCCATG...GAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
CDS-3UTR CCA 90 bp AGCTTCCTCCAGGAAGTCAGGATTGAACTCATAGGCACCATCTTCCCTGAAGAAGGAAACTGTCCTCCATaGGCAGGAGGGCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SFLQEVRIELIGTIFPEEGNCPP*AGGLAA
Trigger: CGCAGCCAGCCCTCCTGCCCATGGAGGACAGTTTCC...TTCTTCAGGGAAGATGGTGCCTATGAGTTCAATCCTGACTTCCTGGAGGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
CDS-3UTR TCA 90 bp CACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTGGCATCAAGTCAGGAGGGCTTaGATCTGGTCCTTTGAACCG +
Preference number: 4 (lower is better)
Translates to: HRGPSGLETLCRNSSIWHQVRRA*IWSFEP
Trigger: CGGTTCAAAGGACCAGATTCAAGCCCTCCTGACTTG...ATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp AGCTTCCTCCAGGAAGTCAGGATTGAACTCATAGGCACCATCTTCCCTGAAGAATGCTGCTGCTGGGGCTaGAGGCTCAGCCTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SFLQEVRIELIGTIFPEECCCWG*RLSLPK
Trigger: TTTTGGGAGGCTGAGCCTCCAGCCCCAGCAGCAGCA...TTCTTCAGGGAAGATGGTGCCTATGAGTTCAATCCTGACTTCCTGGAGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
CDS-3UTR CCA 90 bp GCCATCCATATTGAGCTGGTTATGCCACCACCCTATCAACCAAGATACCCAGGATGTTTCCTAAAGCTGTaGCGGCGAGGAGGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: AIHIELVMPPPYQPRYPGCFLKL*RRGGVP
Trigger: GGGGACACCTCCTCGCCGCCACAGCTTTAGGAAACA...TCCTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR CAA 72 bp CCCCTCTACCAGCCCAGACGAGTCAAGCCATCCATATaGAGCTGGTTATGCCACCACCCTATCAACCAAGAT +
Preference number: 4 (lower is better)
Translates to: PLYQPRRVKPSI*SWLCHHPINQD
Trigger: ATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGATGGCTTGACTCGTCTGGGCTGGTAGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp ACCGCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCCTCCGCTAACTCTTGAACGTTaGATTTCCAGCGAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: TAPSVIGALICKSTVGPPLTLER*ISSECQ
Trigger: CTGACACTCGCTGGAAATTCAACGTTCAAGAGTTAG...CGGAGGGCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp CCAGCCCAGACGAGTCAAGCCATCCATATTGAGCTGGTTATGCCACCACCCTATCACCTGAGGCAATTCTaGTGGAGTAGTCCACAGATC +
Preference number: 4 (lower is better)
Translates to: PAQTSQAIHIELVMPPPYHLRQF*WSSPQI
Trigger: GATCTGTGGACTACTCCATCAGAATTGCCTCAGGTG...ATAGGGTGGTGGCATAACCAGCTCAATATGGATGGCTTGACTCGTCTGGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635608.1
CDS-3UTR GCA 90 bp GCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCCTCCGGTTACCTATATCCTGGGGTaGCTAATTTCTTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: APSVIGALICKSTVGPPVTYILG*LISCTP
Trigger: GGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGT...AACCGGAGGGCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp ACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATAAAACATCAACTCCGCCGGAACCGTGCTaGGTGGGAGGGGGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: TFQSCEDLIVLMPHKTSTPPEPC*VGGGVP
Trigger: AGGGACGCCCCCTCCCACGCAGCACGGTTCCGGCGG...AGTTGATGTTTTATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS-3UTR CCA 90 bp CTCTTGAACGTTGAATTTCCAGCGAGTGTCAGGTTCTCGGAATATAACTTCATACATGGGCAGGAGGGCTaGCTGCGAGAGCCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: LLNVEFPASVRFSEYNFIHGQEG*LREPRV
Trigger: AACCCGGGGCTCTCGCAGCCAGCCCTCCTGCCCATG...TATGAAGTTATATTCCGAGAACCTGACACTCGCTGGAAATTCAACGTTCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
CDS-3UTR CCA 90 bp GTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCGGAAACTGTCCTCCATaGGCAGGAGGGCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: VGQQEIEHTSSVVLSIMIGNCPP*AGGLAA
Trigger: CGCAGCCAGCCCTCCTGCCCATGGAGGACAGTTTCC...GATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
CDS-3UTR CCA 90 bp TGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCGGAAACTGTCCTCCATaGGCAGGAGGGCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: WPTRNRAYVLCGLVYHDLGNCPP*AGGLAA
Trigger: CGCAGCCAGCCCTCCTGCCCATGGAGGACAGTTTCC...GAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
CDS-3UTR CCA 90 bp TTATGTAACCCAGAGCCACTTCTCCATAGTGGTCACTCACTTAACCCAAGTGAGTGCTGCTGCTGGGGCTaGAGGCTCAGCCTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: LCNPEPLLHSGHSLNPSECCCWG*RLSLPK
Trigger: TTTTGGGAGGCTGAGCCTCCAGCCCCAGCAGCAGCA...CTCACTTGGGTTAAGTGAGTGACCACTATGGAGAAGTGGCTCTGGGTTACATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
CDS-3UTR CCA 90 bp GCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGTGCTGCTGCTGGGGCTaGAGGCTCAGCCTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: AVGQQEIEHTSSVVLSIMCCCWG*RLSLPK
Trigger: TTTTGGGAGGCTGAGCCTCCAGCCCCAGCAGCAGCA...CATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
CDS-3UTR CCA 90 bp GTTCCATTCATGAGCTTCCTCCAGGAAGTCAGGATTGAACTCATAGGCACCATCTGTTTCCTAAAGCTGTaGCGGCGAGGAGGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: VPFMSFLQEVRIELIGTICFLKL*RRGGVP
Trigger: GGGGACACCTCCTCGCCGCCACAGCTTTAGGAAACA...GATGGTGCCTATGAGTTCAATCCTGACTTCCTGGAGGAAGCTCATGAATGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
CDS-3UTR CCA 90 bp CTGAGCTGTGGCCCATTTCCTCGCTTACGTCCCAGACTTTTCTATAAACACACACCTTCCGCTGAGCTGTaGCCCATTTCCTCGCTTACG +
Preference number: 4 (lower is better)
Translates to: LSCGPFPRLRPRLFYKHTPSAEL*PISSLT
Trigger: CGTAAGCGAGGAAATGGGCCACAGCTCAGCGGAAGG...TGTGTGTTTATAGAAAAGTCTGGGACGTAAGCGAGGAAATGGGCCACAGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR TCA 90 bp GTGACAACCGCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCAGCCTCCCAAAAGATTaGAGGAAACTGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: VTTAPSVIGALICKSTVGSLPKD*RKLSSM
Trigger: CATGGAGGACAGTTTCCTTCAATCTTTTGGGAGGCT...GCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGCGGTTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
CDS-3UTR TCA 90 bp CACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTGGCATAAAAATCATCCGTGCTaGAAATCAGGGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: HRGPSGLETLCRNSSIWHKNHPC*KSGPWE
Trigger: TTCCCAGGGCCCTGATTTTCAGCACGGATGATTTTT...ATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GACTTTGCTCAGAAACTTTTGAGTTCAGCTATTTACACTGGAATTGGAGCTCTGGACTCTCCGGCCATGTaGTGGATAGAGGGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: DFAQKLLSSAIYTGIGALDSPAM*WIEGRA
Trigger: CGCCCGCCCCTCTATCCATCACATGGCCGGAGAGTC...CAGAGCTCCAATTCCAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS-3UTR GCA 90 bp AGGGAGCCAGCCAAGTCAGGAGGGCTTGAATCTGGTCCTTTGAACCGCTCATGTTTCAAGTGCCATGACTaGATAGGGCTTCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: REPAKSGGLESGPLNRSCFKCHD*IGLHFP
Trigger: TGGGAAATGAAGCCCTATGCAGTCATGGCACTTGAA...ACATGAGCGGTTCAAAGGACCAGATTCAAGCCCTCCTGACTTGGCTGGCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380130.7
ENST00000635608.1
CDS-3UTR GCA 90 bp ACCGCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCCTCCGTCTGCTTGGCTTTTCTaGATGAAGCACACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: TAPSVIGALICKSTVGPPSAWLF*MKHTVK
Trigger: TTTCACAGTGTGCTTCATGCAGAAAAGCCAAGCAGA...CGGAGGGCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp CTACCAGCCCAGACGAGTCAAGCCATCCATATTGAGCTGGTTATGCCACCACCCGGGTGCCTAATTTCTTaGACTCCCAAACATTTGAGC +
Preference number: 4 (lower is better)
Translates to: LPAQTSQAIHIELVMPPPGCLIS*TPKHLS
Trigger: GCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCC...GGGTGGTGGCATAACCAGCTCAATATGGATGGCTTGACTCGTCTGGGCTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR GCA 90 bp GCCCATTTCCTCGCTTACGTCCCAGACTTTTCTATAAACACACAATCCACCCCAATGCCAAGGCTGCTCTaGTCCCAGAACTGCCAATGC +
Preference number: 4 (lower is better)
Translates to: AHFLAYVPDFSINTQSTPMPRLL*SQNCQC
Trigger: GCATTGGCAGTTCTGGGAGCAGAGCAGCCTTGGCAT...TGGGGTGGATTGTGTGTTTATAGAAAAGTCTGGGACGTAAGCGAGGAAATGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR CCA 90 bp GAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCAGCATCAGACCATGCATGGAAACTGTCCTCCATaGGCAGGAGGGCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: EKETVYSNLQNSQHQTMHGNCPP*AGGLAA
Trigger: CGCAGCCAGCCCTCCTGCCCATGGAGGACAGTTTCC...ATGCATGGTCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
CDS-3UTR CCA 90 bp AGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATTGCTGCTGCTGGGGCTaGAGGCTCAGCCTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: RSCWPTRNRAYVLCGLVYCCCWG*RLSLPK
Trigger: TTTTGGGAGGCTGAGCCTCCAGCCCCAGCAGCAGCA...ATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
CDS-3UTR CCA 90 bp AGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATTGCTGCTGCTGGGGCTaGAGGCTCAGCCTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SCWPTRNRAYVLCGLVYHCCCWG*RLSLPK
Trigger: TTTTGGGAGGCTGAGCCTCCAGCCCCAGCAGCAGCA...ATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
CDS-3UTR CCA 90 bp CATTTTGTAATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGGGGGGCGTCCCTACCTaGAAAGCTGGGGACGCTGGG +
Preference number: 4 (lower is better)
Translates to: HFVMSMAFIYPCMTYILGGGVPT*KAGDAG
Trigger: CCCAGCGTCCCCAGCTTTCCAGGTAGGGACGCCCCC...CCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCATTACAAAATG
51% GC, longest homopolymer 9 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS-3UTR TCA 90 bp CCCCAGTTCTATCTTTATGGTGGTCAGGAGCCTCTGGCACATAAGGTCCACAAGCCAGGAAGTCAGGATTaGACTCATAGGCACCATCTT +
Preference number: 4 (lower is better)
Translates to: PQFYLYGGQEPLAHKVHKPGSQD*THRHHL
Trigger: AAGATGGTGCCTATGAGTTCAATCCTGACTTCCTGG...CTTGTGGACCTTATGTGCCAGAGGCTCCTGACCACCATAAAGATAGAACTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343281.9
CDS-3UTR TCA 90 bp CTGAGCTGTGGCCCATTTCCTCGCTTACGTCCCAGACTTTTCTATAAACACACATCGCCAGCTAGTAAGTaGCGAAGTAGGTCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: LSCGPFPRLRPRLFYKHTSPASK*RSRSEG
Trigger: GCCTTCAGACCTACTTCGTCACTTACTAGCTGGCGA...TGTGTGTTTATAGAAAAGTCTGGGACGTAAGCGAGGAAATGGGCCACAGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR GCA 90 bp TCCATATTGAGCTGGTTATGCCACCACCCTATCAACCAAGATACCCAGGACTACGCCCTGGGAAAGTCATaGTGCAATTGTCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SILSWLCHHPINQDTQDYALGKS*CNCLAS
Trigger: ACTGGCCAGACAATTGCAGCATGACTTTCCCAGGGC...GTAGTCCTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp CACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGCATGGGCAGGAGGGCTaGCTGCGAGAGCCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: HNTSQYWVFKELHKSEAMHGQEG*LREPRV
Trigger: AACCCGGGGCTCTCGCAGCCAGCCCTCCTGCCCATG...CATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
CDS-3UTR CCA 90 bp GTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATCTGATTCCAACCTGTGGAAACTGTCCTCCATaGGCAGGAGGGCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: VLCGLVYHDLTLNLIPTCGNCPP*AGGLAA
Trigger: CGCAGCCAGCCCTCCTGCCCATGGAGGACAGTTTCC...ACAGGTTGGAATCAGATTTAATGTGAGATCATGATAGACAAGACCACAGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
CDS-3UTR CCA 90 bp TGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCTGTTTCCTAAAGCTGTaGCGGCGAGGAGGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: WPTRNRAYVLCGLVYHDLCFLKL*RRGGVP
Trigger: GGGGACACCTCCTCGCCGCCACAGCTTTAGGAAACA...GAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp TGTAAATCCACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTAGTGGGCCCTCCGGTTTaGAAACTCTGTGTAGGAATT +
Preference number: 4 (lower is better)
Translates to: CKSTVGPPVWKLCVGIPVVGPPV*KLCVGI
Trigger: AATTCCTACACAGAGTTTCCAAACCGGAGGGCCCAC...TACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGTGGATTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp CCAGCCCAGACGAGTCAAGCCATCCATATTGAGCTGGTTATGCCACCACCCTATAGGACTACCTGGGCCTaGAAAATGGGAGCATTATTA +
Preference number: 4 (lower is better)
Translates to: PAQTSQAIHIELVMPPPYRTTWA*KMGALL
Trigger: TAATAATGCTCCCATTTTCCAGGCCCAGGTAGTCCT...ATAGGGTGGTGGCATAACCAGCTCAATATGGATGGCTTGACTCGTCTGGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp CACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTGGCATCCGGTGGCATACCTGTaGAATCCTTTGCTTATTTTT +
Preference number: 4 (lower is better)
Translates to: HRGPSGLETLCRNSSIWHPVAYL*NPLLIF
Trigger: AAAAATAAGCAAAGGATTTCACAGGTATGCCACCGG...ATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343281.9
CDS-3UTR TCA 90 bp CCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTGGCATTGTTGGAAGGTCAAGCCATCCATATTaGGCTGGTTATGCCACCACC +
Preference number: 4 (lower is better)
Translates to: PPVWKLCVGIPVSGIVGRSSHPY*AGYATT
Trigger: GGTGGTGGCATAACCAGCTCAATATGGATGGCTTGA...CCTTCCAACAATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp CCAGCCCAGACGAGTCAAGCCATCCATATTGAGCTGGTTATGCCACCACCCTATAGAAGCCATGGGAGTTaGAAAACAGATCACTTCTAC +
Preference number: 4 (lower is better)
Translates to: PAQTSQAIHIELVMPPPYRSHGS*KTDHFY
Trigger: GTAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCT...ATAGGGTGGTGGCATAACCAGCTCAATATGGATGGCTTGACTCGTCTGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp CACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTGGCATCATTTGCCAGTTCTATaGATGATGCAAACAGCGAAC +
Preference number: 4 (lower is better)
Translates to: HRGPSGLETLCRNSSIWHHLPVL*MMQTAN
Trigger: GTTCGCTGTTTGCATCATTCATAGAACTGGCAAATG...ATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp ACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTGGCATTTTCAAGTGCCATGACTaGATAGGGCTTCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: TVGPPVWKLCVGIPVSGIFKCHD*IGLHFP
Trigger: TGGGAAATGAAGCCCTATGCAGTCATGGCACTTGAA...AATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp ACCGCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCCTCCGATAGTTATTTTCAAGTaGCATGACTGCATAGGGCTT +
Preference number: 4 (lower is better)
Translates to: TAPSVIGALICKSTVGPPIVIFK*HDCIGL
Trigger: AAGCCCTATGCAGTCATGGCACTTGAAAATAACTAT...CGGAGGGCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp TTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCATGGGCAGGAGGGCTaGCTGCGAGAGCCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: FQILTLEKETVYSNLQNSHGQEG*LREPRV
Trigger: AACCCGGGGCTCTCGCAGCCAGCCCTCCTGCCCATG...GGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
CDS-3UTR CCA 90 bp AGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTTCTTGCTGCTGCTGGGGCTaGAGGCTCAGCCTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SMAFIYPCMTYILGCLISCCCWG*RLSLPK
Trigger: TTTTGGGAGGCTGAGCCTCCAGCCCCAGCAGCAGCA...AGAAATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
CDS-3UTR CCA 90 bp TGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATTGTTTCCTAAAGCTGTaGCGGCGAGGAGGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: CWPTRNRAYVLCGLVYHDCFLKL*RRGGVP
Trigger: GGGGACACCTCCTCGCCGCCACAGCTTTAGGAAACA...ATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000495479.5
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp GTGACAACCGCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCGATATATACCTCCGGTaGCATACCTGTGAAATCCTT +
Preference number: 4 (lower is better)
Translates to: VTTAPSVIGALICKSTVGDIYLR*HTCEIL
Trigger: AAGGATTTCACAGGTATGCCACCGGAGGTATATATC...GCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGCGGTTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343281.9
CDS-3UTR CCA 90 bp TCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCCTCCGGTTTGGAAAGTTCTATCTTTATGGTaGTCAGGAGCCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: SVIGALICKSTVGPPVWKVLSLW*SGASGT
Trigger: TGTGCCAGAGGCTCCTGACCACCATAAAGATAGAAC...TTTCCAAACCGGAGGGCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343281.9
ENST00000459716.6
CDS-3UTR CCA 90 bp CTATATCCTGGGGTGCCTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTCCAGTTCTATCTTTATaGTGGTCAGGAGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LYPGVPNFLHSQTFELPTPVLSL*WSGASG
Trigger: GCCAGAGGCTCCTGACCACCATAAAGATAGAACTGG...AGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCCAGGATATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS-3UTR CCA 90 bp AGGGAGCCAGCCAAGTCAGGAGGGCTTGAATCTGGTCCTTTGAACCGCTCATGTAGTATCTGGCATTGTTaGAAGGCAATGCATTATTCC +
Preference number: 4 (lower is better)
Translates to: REPAKSGGLESGPLNRSCSIWHC*KAMHYS
Trigger: GGAATAATGCATTGCCTTCCAACAATGCCAGATACT...ACATGAGCGGTTCAAAGGACCAGATTCAAGCCCTCCTGACTTGGCTGGCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp TCCATATTGAGCTGGTTATGCCACCACCCTATCAACCAAGATACCCAGGACTACGTGGGCCCTCCGGTTTaGAAACTCTGTGTAGGAATT +
Preference number: 4 (lower is better)
Translates to: SILSWLCHHPINQDTQDYVGPPV*KLCVGI
Trigger: AATTCCTACACAGAGTTTCCAAACCGGAGGGCCCAC...GTAGTCCTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp ACACATGGTGTTGGTAGTCATGGAGATGTCGAGCAGGTTTCAGTAGTGTCAGATATACCCAGGACTACCTaGGCCTGGAAAATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: THGVGSHGDVEQVSVVSDIPRTT*AWKMGA
Trigger: TGCTCCCATTTTCCAGGCCCAGGTAGTCCTGGGTAT...ATCTGACACTACTGAAACCTGCTCGACATCTCCATGACTACCAACACCATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp GCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATACCCAGGACTACCTaGGCCTGGAAAATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: AVGQQEIEHTSSVVLSIMIPRTT*AWKMGA
Trigger: TGCTCCCATTTTCCAGGCCCAGGTAGTCCTGGGTAT...CATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp GATAGGCCTCTAATATCCATGGTGACAACCGCCCCTTCTGTGATAGGAGCTCTCCTGAAGTCACGGTCTTaGCCAAAGCTGTTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: DRPLISMVTTAPSVIGALLKSRS*PKLLFL
Trigger: CAAAAACAACAGCTTTGGCCAAGACCGTGACTTCAG...GAGAGCTCCTATCACAGAAGGGGCGGTTGTCACCATGGATATTAGAGGCCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459716.6
ENST00000613078.4
CDS-3UTR TCA 90 bp TCCATATTGAGCTGGTTATGCCACCACCCTATCAACCAAGATACCCAGGACTACAAAAATCATCCGTGCTaGAAATCAGGGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SILSWLCHHPINQDTQDYKNHPC*KSGPWE
Trigger: TTCCCAGGGCCCTGATTTTCAGCACGGATGATTTTT...GTAGTCCTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp GCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCCTCCGGTTTTGCTCAGAAACTTTTaGGTTCAGCTATTTACACTG +
Preference number: 4 (lower is better)
Translates to: APSVIGALICKSTVGPPVLLRNF*VQLFTL
Trigger: CAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAA...AACCGGAGGGCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp TGTAAATCCACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATTATATATCCCTGTATaGCCTATATCCTGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: CKSTVGPPVWKLCVGIPVLYIPV*PISWGA
Trigger: GGCACCCCAGGATATAGGTCATACAGGGATATATAA...TACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGTGGATTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp CAGGATCCAGGGAACACTGAAGATTTATCTCAGCTGACCAACAACGGAGCAGTAGGATCCAGGGAACACTaGAGATTTATCTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: QDPGNTEDLSQLTNNGAVGSREH*RFISAD
Trigger: GTCAGCTGAGATAAATCTTCAGTGTTCCCTGGATCC...TACTGCTCCGTTGTTGGTCAGCTGAGATAAATCTTCAGTGTTCCCTGGATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR TCA 90 bp CTATATCCTGGGGTGCCTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTAAGCTGTTGTTTTTGTaGCTCTCCGGCCATGTGATG +
Preference number: 4 (lower is better)
Translates to: LYPGVPNFLHSQTFELPTKLLFL*LSGHVM
Trigger: CATCACATGGCCGGAGAGTCACAAAAACAACAGCTT...AGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCCAGGATATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS-3UTR GCA 90 bp CACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTGGCATATTGTTGGAAGGCAATaGATTATTCCTGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: HRGPSGLETLCRNSSIWHIVGRQ*IIPVLV
Trigger: AACCAGGACAGGAATAATGCATTGCCTTCCAACAAT...ATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp GTGACAACCGCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCTGTTTACTCAAATCTaGAGAATTCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: VTTAPSVIGALICKSTVGLFTQI*RIPSIR
Trigger: TCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAG...GCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGCGGTTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp AAAGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTGCCCTGGGAAAGTCATaGTGCAATTGTCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: KEAVGQQEIEHTSSVVLSALGKS*CNCLAS
Trigger: ACTGGCCAGACAATTGCAGCATGACTTTCCCAGGGC...AGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000495479.5
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp CTATATCCTGGGGTGCCTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTACCTATATCCTGGGGTaGCTAATTTCTTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: LYPGVPNFLHSQTFELPTTYILG*LISCTP
Trigger: GGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGT...AGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCCAGGATATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp AGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATGGAAACTGTCCTCCATaGGCAGGAGGGCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: RNRAYVLCGLVYHDLTLNGNCPP*AGGLAA
Trigger: CGCAGCCAGCCCTCCTGCCCATGGAGGACAGTTTCC...ATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
CDS-3UTR CCA 90 bp CTCTTGAACGTTGAATTTCCAGCGAGTGTCAGGTTCTCGGAATATAACTTCATATGTTTCCTAAAGCTGTaGCGGCGAGGAGGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LLNVEFPASVRFSEYNFICFLKL*RRGGVP
Trigger: GGGGACACCTCCTCGCCGCCACAGCTTTAGGAAACA...TATGAAGTTATATTCCGAGAACCTGACACTCGCTGGAAATTCAACGTTCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
CDS-3UTR CCA 90 bp AGGCCTCTAATATCCATGGTGACAACCGCCCCTTCTGTGATAGGAGCTCTCATTTATGTGGACATTTCCTaGGGATATATACCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: RPLISMVTTAPSVIGALIYVDIS*GYIPPV
Trigger: CACCGGAGGTATATATCCCCAGGAAATGTCCACATA...AATGAGAGCTCCTATCACAGAAGGGGCGGTTGTCACCATGGATATTAGAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343281.9
CDS-3UTR CCA 90 bp GCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGGTGGGCCCTCCGGTTTaGAAACTCTGTGTAGGAATT +
Preference number: 4 (lower is better)
Translates to: AVGQQEIEHTSSVVLSIMVGPPV*KLCVGI
Trigger: AATTCCTACACAGAGTTTCCAAACCGGAGGGCCCAC...CATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp GCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGTTTGTAAATCCACCGTaGGCCCTCCGGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: AVGQQEIEHTSSVVLSIMFVNPP*ALRFGN
Trigger: GTTTCCAAACCGGAGGGCCCACGGTGGATTTACAAA...CATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp GAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCTTTGTAAATCCACCGTaGGCCCTCCGGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: EAVGQQEIEHTSSVVLSIFVNPP*ALRFGN
Trigger: GTTTCCAAACCGGAGGGCCCACGGTGGATTTACAAA...GATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp CTATATCCTGGGGTGCCTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTCCATCCATATTGAGCTaGTTATGCCACCACCCTATC +
Preference number: 4 (lower is better)
Translates to: LYPGVPNFLHSQTFELPTPSILS*LCHHPI
Trigger: GATAGGGTGGTGGCATAACCAGCTCAATATGGATGG...AGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCCAGGATATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR TCA 90 bp CCACCACTTCTCTCCACCTTCCCAACTTTACCGATGGAGATGAATTTCCTGAAAAGCCTCCCAAAAGATTaGAGGAAACTGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PPLLSTFPTLPMEMNFLKSLPKD*RKLSSM
Trigger: CATGGAGGACAGTTTCCTTCAATCTTTTGGGAGGCT...TTTCAGGAAATTCATCTCCATCGGTAAAGTTGGGAAGGTGGAGAGAAGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
CDS-3UTR TCA 90 bp GATAGGCCTCTAATATCCATGGTGACAACCGCCCCTTCTGTGATAGGAGCTCTCAGGCGGCTGCATCTTTaGTCCCAATTTTTAAATTTC +
Preference number: 4 (lower is better)
Translates to: DRPLISMVTTAPSVIGALRRLHL*SQFLNF
Trigger: GAAATTTAAAAATTGGGATCAAAGATGCAGCCGCCT...GAGAGCTCCTATCACAGAAGGGGCGGTTGTCACCATGGATATTAGAGGCCTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343281.9
CDS-3UTR TCA 90 bp ATCCATATTGAGCTGGTTATGCCACCACCCTATCAACCAAGATACCCAGGACTAAAAAATCATCCGTGCTaGAAATCAGGGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: IHIELVMPPPYQPRYPGLKNHPC*KSGPWE
Trigger: TTCCCAGGGCCCTGATTTTCAGCACGGATGATTTTT...TAGTCCTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp GCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGAAAAATCATCCGTGCTaGAAATCAGGGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: AVGQQEIEHTSSVVLSIMKNHPC*KSGPWE
Trigger: TTCCCAGGGCCCTGATTTTCAGCACGGATGATTTTT...CATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGCCAGGAAGTCAGGATTaGACTCATAGGCACCATCTT +
Preference number: 4 (lower is better)
Translates to: AVGQQEIEHTSSVVLSIMPGSQD*THRHHL
Trigger: AAGATGGTGCCTATGAGTTCAATCCTGACTTCCTGG...CATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCCCAGGAAGTCAGGATTaGACTCATAGGCACCATCTT +
Preference number: 4 (lower is better)
Translates to: EAVGQQEIEHTSSVVLSIPGSQD*THRHHL
Trigger: AAGATGGTGCCTATGAGTTCAATCCTGACTTCCTGG...GATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp CTCCATAGTGGTCACTCACTTAACCCAAGTGAGCCAAAAACCCTAAAGCAGGGATTTTGGTTCCATTCATaGGCTTCCTCCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LHSGHSLNPSEPKTLKQGFWFHS*ASSRKS
Trigger: TGACTTCCTGGAGGAAGCTCATGAATGGAACCAAAA...TCCCTGCTTTAGGGTTTTTGGCTCACTTGGGTTAAGTGAGTGACCACTATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp ACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTGGCATTTATTTTCAAGTGCCATaGCTGCATAGGGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: TVGPPVWKLCVGIPVSGIYFQVP*LHRASF
Trigger: AAATGAAGCCCTATGCAGTCATGGCACTTGAAAATA...AATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp AGGCCTCTAATATCCATGGTGACAACCGCCCCTTCTGTGATAGGAGCTCTCATTCTTCTTGCTAACTCTTaGACGTTGAATTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: RPLISMVTTAPSVIGALILLANS*TLNFQR
Trigger: TCGCTGGAAATTCAACGTTCAAGAGTTAGCAAGAAG...AATGAGAGCTCCTATCACAGAAGGGGCGGTTGTCACCATGGATATTAGAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
CDS-3UTR TCA 90 bp GTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCAAGCCATCCATATTaGGCTGGTTATGCCACCACC +
Preference number: 4 (lower is better)
Translates to: VGQQEIEHTSSVVLSIMISSHPY*AGYATT
Trigger: GGTGGTGGCATAACCAGCTCAATATGGATGGCTTGA...GATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp CAGGATCCAGGGAACACTGAAGATTTATCTCAGCTGACCAACAACGGAGCAGTAGAAAAACTAGATGACTaGCCAAAGTCGCCAGCTAGT +
Preference number: 4 (lower is better)
Translates to: QDPGNTEDLSQLTNNGAVEKLDD*PKSPAS
Trigger: ACTAGCTGGCGACTTTGGTCAGTCATCTAGTTTTTC...TACTGCTCCGTTGTTGGTCAGCTGAGATAAATCTTCAGTGTTCCCTGGATCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR TCA 90 bp CAGGATCCAGGGAACACTGAAGATTTATCTCAGCTGACCAACAACGGAGCAGTACACAGAGGGGTTGGGTaGAAAGCAAAACTAGTGAAT +
Preference number: 4 (lower is better)
Translates to: QDPGNTEDLSQLTNNGAVHRGVG*KAKLVN
Trigger: ATTCACTAGTTTTGCTTTTCACCCAACCCCTCTGTG...TACTGCTCCGTTGTTGGTCAGCTGAGATAAATCTTCAGTGTTCCCTGGATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR GCA 90 bp AGCTTCCTCCAGGAAGTCAGGATTGAACTCATAGGCACCATCTTCCCTGAAGAACTGGGAAAGTCATGCTaGAATTGTCATTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: SFLQEVRIELIGTIFPEELGKSC*NCHSIS
Trigger: GCTGATGGAATGACAATTGCAGCATGACTTTCCCAG...TTCTTCAGGGAAGATGGTGCCTATGAGTTCAATCCTGACTTCCTGGAGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343281.9
ENST00000459716.6
CDS-3UTR GCA 90 bp GCCATCCATATTGAGCTGGTTATGCCACCACCCTATCAACCAAGATACCCAGGATCTGCTTGGCTTTTCTaGATGAAGCACACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: AIHIELVMPPPYQPRYPGSAWLF*MKHTVK
Trigger: TTTCACAGTGTGCTTCATGCAGAAAAGCCAAGCAGA...TCCTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp ATCCATATTGAGCTGGTTATGCCACCACCCTATCAACCAAGATACCCAGGACTACTGGGAAAGTCATGCTaGAATTGTCTGGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: IHIELVMPPPYQPRYPGLLGKSC*NCLASV
Trigger: TACACTGGCCAGACAATTGCAGCATGACTTTCCCAG...TAGTCCTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp TGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATGCCCTGGGAAAGTCATaGTGCAATTGTCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: CWPTRNRAYVLCGLVYHDALGKS*CNCLAS
Trigger: ACTGGCCAGACAATTGCAGCATGACTTTCCCAGGGC...ATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000495479.5
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp TCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCCTCCGGTTTGGAAACTGAAATACCATGACTaGATAGGGCTTCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: SVIGALICKSTVGPPVWKLKYHD*IGLHFP
Trigger: TGGGAAATGAAGCCCTATGCAGTCATGGTATTTCAG...TTTCCAAACCGGAGGGCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380139.8
ENST00000613078.4
CDS-3UTR GCA 90 bp GCTTACGTCCCAGACTTTTCTATAAACACACAATCCACCCCATGGCATGCCAAGGGACTCAAAGTCAACTaGCAAGCTACCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: AYVPDFSINTQSTPWHAKGLKVN*QATFFT
Trigger: AGTGAAGAAGGTAGCTTGGCAGTTGACTTTGAGTCC...CTTGGCATGCCATGGGGTGGATTGTGTGTTTATAGAAAAGTCTGGGACGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR CCA 90 bp CAATCATTTAATGAGACCCTATTGCCCATAAAGAGCATTTGCCAGTTCTATGAATGCTGCTGCTGGGGCTaGAGGCTCAGCCTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: QSFNETLLPIKSICQFYECCCWG*RLSLPK
Trigger: TTTTGGGAGGCTGAGCCTCCAGCCCCAGCAGCAGCA...TTCATAGAACTGGCAAATGCTCTTTATGGGCAATAGGGTCTCATTAAATGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
CDS-3UTR CCA 90 bp AGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATCTGATTTGTTTCCTAAAGCTGTaGCGGCGAGGAGGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RAYVLCGLVYHDLTLNLICFLKL*RRGGVP
Trigger: GGGGACACCTCCTCGCCGCCACAGCTTTAGGAAACA...AATCAGATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp GAAAAGTTATGTAACCCAGAGCCACTTCTCCATAGTGGTCACTCACTTAACCCAGTGGGCCCTCCGGTTTaGAAACTCTGTGTAGGAATT +
Preference number: 4 (lower is better)
Translates to: EKLCNPEPLLHSGHSLNPVGPPV*KLCVGI
Trigger: AATTCCTACACAGAGTTTCCAAACCGGAGGGCCCAC...TGGGTTAAGTGAGTGACCACTATGGAGAAGTGGCTCTGGGTTACATAACTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp ATCCATATTGAGCTGGTTATGCCACCACCCTATCAACCAAGATACCCAGGACTACCATCCATATTGAGCTaGTTATGCCACCACCCTATC +
Preference number: 4 (lower is better)
Translates to: IHIELVMPPPYQPRYPGLPSILS*LCHHPI
Trigger: GATAGGGTGGTGGCATAACCAGCTCAATATGGATGG...TAGTCCTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp GTCTACTTTGAAGGACAATGTTCCCTTAGATGTATGCTTTCTGGCATATTAACAGAAAGCTGGGGACGCTaGGAGACTCACAGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: VYFEGQCSLRCMLSGILTESWGR*ETHSPE
Trigger: TTCCGGGCTGTGAGTCTCCCAGCGTCCCCAGCTTTC...TGTTAATATGCCAGAAAGCATACATCTAAGGGAACATTGTCCTTCAAAGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS-3UTR CCA 90 bp GGGGTGCCTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTAATTACACACCAGTTCTATCTTTATaGTGGTCAGGAGCCTCATGC +
Preference number: 4 (lower is better)
Translates to: GVPNFLHSQTFELPTNYTPVLSL*WSGASC
Trigger: GCATGAGGCTCCTGACCACCATAAAGATAGAACTGG...TGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530622.6
CDS-3UTR TCA 90 bp TGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCAGCCTCCCAAAAGATTaGAGGAAACTGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: WPTRNRAYVLCGLVYHDLSLPKD*RKLSSM
Trigger: CATGGAGGACAGTTTCCTTCAATCTTTTGGGAGGCT...GAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
CDS-3UTR TCA 90 bp GGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCAAGCCTCCCAAAAGATTaGAGGAAACTGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: GQQEIEHTSSVVLSIMISSLPKD*RKLSSM
Trigger: CATGGAGGACAGTTTCCTTCAATCTTTTGGGAGGCT...TGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
CDS-3UTR TCA 90 bp GTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCAAAAATCATCCGTGCTaGAAATCAGGGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VGQQEIEHTSSVVLSIMIKNHPC*KSGPWE
Trigger: TTCCCAGGGCCCTGATTTTCAGCACGGATGATTTTT...GATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCCCAGGAAGTCAGGATTaGACTCATAGGCACCATCTT +
Preference number: 4 (lower is better)
Translates to: VGQQEIEHTSSVVLSIMIPGSQD*THRHHL
Trigger: AAGATGGTGCCTATGAGTTCAATCCTGACTTCCTGG...GATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGTTTTGGTTCCATTCATaGGCTTCCTCCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: AVGQQEIEHTSSVVLSIMFWFHS*ASSRKS
Trigger: TGACTTCCTGGAGGAAGCTCATGAATGGAACCAAAA...CATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCTTTTGGTTCCATTCATaGGCTTCCTCCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: EAVGQQEIEHTSSVVLSIFWFHS*ASSRKS
Trigger: TGACTTCCTGGAGGAAGCTCATGAATGGAACCAAAA...GATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGCTAACTCTTGAACGTTaGATTTCCAGCGAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: AVGQQEIEHTSSVVLSIMLTLER*ISSECQ
Trigger: CTGACACTCGCTGGAAATTCAACGTTCAAGAGTTAG...CATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp ACACATGGTGTTGGTAGTCATGGAGATGTCGAGCAGGTTTCAGTAGTGTCAGATCTAACTCTTGAACGTTaGATTTCCAGCGAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: THGVGSHGDVEQVSVVSDLTLER*ISSECQ
Trigger: CTGACACTCGCTGGAAATTCAACGTTCAAGAGTTAG...ATCTGACACTACTGAAACCTGCTCGACATCTCCATGACTACCAACACCATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380130.7
ENST00000635608.1
CDS-3UTR TCA 90 bp AGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTTCTCAAGTCAGGAGGGCTTaGATCTGGTCCTTTGAACCG +
Preference number: 4 (lower is better)
Translates to: SMAFIYPCMTYILGCLISQVRRA*IWSFEP
Trigger: CGGTTCAAAGGACCAGATTCAAGCCCTCCTGACTTG...AGAAATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR GCA 90 bp TGTTCACTGATGATTCCCAAGTACCTAGAACACTCTTGTGTGTATGTGGACATTTTGGGCTGTCTGTGCTaGTTAAATGGGAAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: CSLMIPKYLEHSCVYVDILGCLC*LNGKAA
Trigger: AGCCGCCTTCCCATTTAAGCAGCACAGACAGCCCAA...AATGTCCACATACACACAAGAGTGTTCTAGGTACTTGGGAATCATCAGTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343281.9
CDS-3UTR GCA 90 bp GGGGTGCCTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTAATTACACATTCAAGTGCCATGACTaGATAGGGCTTCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: GVPNFLHSQTFELPTNYTFKCHD*IGLHFP
Trigger: TGGGAAATGAAGCCCTATGCAGTCATGGCACTTGAA...TGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380130.7
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp AGCTTCCTCCAGGAAGTCAGGATTGAACTCATAGGCACCATCTTCCCTGAAGAATCTGCTTGGCTTTTCTaGATGAAGCACACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: SFLQEVRIELIGTIFPEESAWLF*MKHTVK
Trigger: TTTCACAGTGTGCTTCATGCAGAAAAGCCAAGCAGA...TTCTTCAGGGAAGATGGTGCCTATGAGTTCAATCCTGACTTCCTGGAGGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
CDS-3UTR GCA 90 bp AGGCCTCTAATATCCATGGTGACAACCGCCCCTTCTGTGATAGGAGCTCTCATTCTGTTTACTCAAATCTaGAGAATTCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: RPLISMVTTAPSVIGALILFTQI*RIPSIR
Trigger: TCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAG...AATGAGAGCTCCTATCACAGAAGGGGCGGTTGTCACCATGGATATTAGAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp AGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCTGGGAAAGTCATGCTaGAATTGTCTGGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: RSCWPTRNRAYVLCGLVYLGKSC*NCLASV
Trigger: TACACTGGCCAGACAATTGCAGCATGACTTTCCCAG...ATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000495479.5
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp AGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATCTGGGAAAGTCATGCTaGAATTGTCTGGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: SCWPTRNRAYVLCGLVYHLGKSC*NCLASV
Trigger: TACACTGGCCAGACAATTGCAGCATGACTTTCCCAG...ATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000495479.5
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp AGGCCTCTAATATCCATGGTGACAACCGCCCCTTCTGTGATAGGAGCTCTCATTCCCAAACATTTGAGCTaGCGACTAATTACACATGTT +
Preference number: 4 (lower is better)
Translates to: RPLISMVTTAPSVIGALIPKHLS*RLITHV
Trigger: AACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGG...AATGAGAGCTCCTATCACAGAAGGGGCGGTTGTCACCATGGATATTAGAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp CCACCACTTCTCTCCACCTTCCCAACTTTACCGATGGAGATGAATTTCCTGAAAGGGTGCCTAATTTCTTaGACTCCCAAACATTTGAGC +
Preference number: 4 (lower is better)
Translates to: PPLLSTFPTLPMEMNFLKGCLIS*TPKHLS
Trigger: GCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCC...TTTCAGGAAATTCATCTCCATCGGTAAAGTTGGGAAGGTGGAGAGAAGTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp AGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATACCTATATCCTGGGGTaGCTAATTTCTTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: SCWPTRNRAYVLCGLVYHTYILG*LISCTP
Trigger: GGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGT...ATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp AGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATTGTTTCCTAAAGCTGTaGCGGCGAGGAGGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RNRAYVLCGLVYHDLTLNCFLKL*RRGGVP
Trigger: GGGGACACCTCCTCGCCGCCACAGCTTTAGGAAACA...ATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp AACGTTGAATTTCCAGCGAGTGTCAGGTTCTCGGAATATAACTTCATAGTTATTTGTTTCCTAAAGCTGTaGCGGCGAGGAGGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: NVEFPASVRFSEYNFIVICFLKL*RRGGVP
Trigger: GGGGACACCTCCTCGCCGCCACAGCTTTAGGAAACA...AATAACTATGAAGTTATATTCCGAGAACCTGACACTCGCTGGAAATTCAACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
CDS-3UTR CCA 90 bp TGTAAATCCACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTAGCATTATTCCTGTCCTaGTTTCTGTTCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: CKSTVGPPVWKLCVGIPVALFLS*FLFILL
Trigger: AAGCAGAATGAACAGAAACCAGGACAGGAATAATGC...TACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGTGGATTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp CTATATCCTGGGGTGCCTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTAGGAATTCCAGTATCTaGCATTGTTGGAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: LYPGVPNFLHSQTFELPTRNSSI*HCWKAM
Trigger: CATTGCCTTCCAACAATGCCAGATACTGGAATTCCT...AGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCCAGGATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp GAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTTCTTTGTAAATCCACCGTaGGCCCTCCGGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: EHGFYISLYDLYPGVPNFFVNPP*ALRFGN
Trigger: GTTTCCAAACCGGAGGGCCCACGGTGGATTTACAAA...GAAATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp GAAAACATTACACATGGTGTTGGTAGTCATGGAGATGTCGAGCAGGTTTCAGTATTTGTAAATCCACCGTaGGCCCTCCGGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: ENITHGVGSHGDVEQVSVFVNPP*ALRFGN
Trigger: GTTTCCAAACCGGAGGGCCCACGGTGGATTTACAAA...TACTGAAACCTGCTCGACATCTCCATGACTACCAACACCATGTGTAATGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp TGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATTTTGTAAATCCACCGTaGGCCCTCCGGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: CWPTRNRAYVLCGLVYHDFVNPP*ALRFGN
Trigger: GTTTCCAAACCGGAGGGCCCACGGTGGATTTACAAA...ATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp CAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATATACCCAGGACTACCTaGGCCTGGAAAATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: QQEIEHTSSVVLSIMISHIPRTT*AWKMGA
Trigger: TGCTCCCATTTTCCAGGCCCAGGTAGTCCTGGGTAT...ATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
3UTR CAA 72 bp TCCCTGTATGACCTATATCCTGGGGTGCCTAATTTCTaGCACTCCCAAACATTTGAGCTGCCGACTAATTAC +
Preference number: 4 (lower is better)
Translates to: SLYDLYPGVPNF*HSQTFELPTNY
Trigger: GTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGTCATACAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTTTTGGTTCCATTCATaGGCTTCCTCCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: VGQQEIEHTSSVVLSIMIFWFHS*ASSRKS
Trigger: TGACTTCCTGGAGGAAGCTCATGAATGGAACCAAAA...GATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GTTCCATTCATGAGCTTCCTCCAGGAAGTCAGGATTGAACTCATAGGCACCATCTATTTTCAAGTGCCATaGCTGCATAGGGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: VPFMSFLQEVRIELIGTIYFQVP*LHRASF
Trigger: AAATGAAGCCCTATGCAGTCATGGCACTTGAAAATA...GATGGTGCCTATGAGTTCAATCCTGACTTCCTGGAGGAAGCTCATGAATGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
CDS-3UTR TCA 90 bp GTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCCTAACTCTTGAACGTTaGATTTCCAGCGAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: VGQQEIEHTSSVVLSIMILTLER*ISSECQ
Trigger: CTGACACTCGCTGGAAATTCAACGTTCAAGAGTTAG...GATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp AGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATCTAACTCTTGAACGTTaGATTTCCAGCGAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: SCWPTRNRAYVLCGLVYHLTLER*ISSECQ
Trigger: CTGACACTCGCTGGAAATTCAACGTTCAAGAGTTAG...ATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGCTTCTTGCTAACTCTTaGACGTTGAATTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: AVGQQEIEHTSSVVLSIMLLANS*TLNFQR
Trigger: TCGCTGGAAATTCAACGTTCAAGAGTTAGCAAGAAG...CATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000635178.1
CDS-3UTR TCA 90 bp AGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATTTATATATCCCTGTATaGCCTATATCCTGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: SCWPTRNRAYVLCGLVYHLYIPV*PISWGA
Trigger: GGCACCCCAGGATATAGGTCATACAGGGATATATAA...ATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp ATCCATATTGAGCTGGTTATGCCACCACCCTATCAACCAAGATACCCAGGACTATGCCAGTTCTATGAATaGTGCAAACAGCGAACACAA +
Preference number: 4 (lower is better)
Translates to: IHIELVMPPPYQPRYPGLCQFYE*CKQRTQ
Trigger: TTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCA...TAGTCCTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp CCACTTCTCCATAGTGGTCACTCACTTAACCCAAGTGAGCCAAAAACCCTAAAGCATTTGCCAGTTCTATaGATGATGCAAACAGCGAAC +
Preference number: 4 (lower is better)
Translates to: PLLHSGHSLNPSEPKTLKHLPVL*MMQTAN
Trigger: GTTCGCTGTTTGCATCATTCATAGAACTGGCAAATG...CTTTAGGGTTTTTGGCTCACTTGGGTTAAGTGAGTGACCACTATGGAGAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp AGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATCCGGGTTCCCTTTACTaGAGTCACGGTCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: RNRAYVLCGLVYHDLTLNPGSLY*SHGLGQ
Trigger: TTGGCCAAGACCGTGACTTCAGTAAAGGGAACCCGG...ATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459716.6
ENST00000613078.4
CDS-3UTR TCA 90 bp CAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGAGTTGAAAAACCGGGTTCCCTTTACTaGAGTCACGGTCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: QYWVFKELHKSEAMGVEKPGSLY*SHGLGQ
Trigger: TTGGCCAAGACCGTGACTTCAGTAAAGGGAACCCGG...TTTTTCAACTCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613078.4
CDS-3UTR GCA 90 bp CTCTTGAACGTTGAATTTCCAGCGAGTGTCAGGTTCTCGGAATATAACTTCATAACTTTGGGCTGTCTGTaGTGCTTAAATGGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LLNVEFPASVRFSEYNFITLGCL*CLNGKA
Trigger: CGCCTTCCCATTTAAGCAGCACAGACAGCCCAAAGT...TATGAAGTTATATTCCGAGAACCTGACACTCGCTGGAAATTCAACGTTCAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343281.9
CDS-3UTR GCA 90 bp AGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATTTCAAGTGCCATGACTaGATAGGGCTTCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: RSCWPTRNRAYVLCGLVYFKCHD*IGLHFP
Trigger: TGGGAAATGAAGCCCTATGCAGTCATGGCACTTGAA...ATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp CTCCATAGTGGTCACTCACTTAACCCAAGTGAGCCAAAAACCCTAAAGCAGGGAATTGTTGGAAGGCAATaGATTATTCCTGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: LHSGHSLNPSEPKTLKQGIVGRQ*IIPVLV
Trigger: AACCAGGACAGGAATAATGCATTGCCTTCCAACAAT...TCCCTGCTTTAGGGTTTTTGGCTCACTTGGGTTAAGTGAGTGACCACTATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp CTCCATAGTGGTCACTCACTTAACCCAAGTGAGCCAAAAACCCTAAAGCAGGGACCCAAACATTTGAGCTaGCGACTAATTACACATGTT +
Preference number: 4 (lower is better)
Translates to: LHSGHSLNPSEPKTLKQGPKHLS*RLITHV
Trigger: AACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGG...TCCCTGCTTTAGGGTTTTTGGCTCACTTGGGTTAAGTGAGTGACCACTATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR GCA 90 bp AGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGGGTGCCTAATTTCTTaGACTCCCAAACATTTGAGC +
Preference number: 4 (lower is better)
Translates to: SCWPTRNRAYVLCGLVYHGCLIS*TPKHLS
Trigger: GCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCC...ATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp GGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCAGGGTGCCTAATTTCTTaGACTCCCAAACATTTGAGC +
Preference number: 4 (lower is better)
Translates to: GQQEIEHTSSVVLSIMISGCLIS*TPKHLS
Trigger: GCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCC...TGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp AATAGAGAAAATGTGAATTTCCCAGAATCCAACAACACACAGATAACCTTACAGTCCCAGAACTGCCAATaGCCAGCGAAACGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: NRENVNFPESNNTQITLQSQNCQ*PAKRED
Trigger: GTCCTCCCGTTTCGCTGGGCATTGGCAGTTCTGGGA...CTGTAAGGTTATCTGTGTGTTGTTGGATTCTGGGAAATTCACATTTTCTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR GCA 90 bp GTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCCTGGGAAAGTCATGCTaGAATTGTCTCTGGCACATA +
Preference number: 4 (lower is better)
Translates to: VGQQEIEHTSSVVLSIMILGKSC*NCLWHI
Trigger: TATGTGCCAGAGACAATTGCAGCATGACTTTCCCAG...GATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635178.1
CDS-3UTR CCA 90 bp AGCTTCCTCCAGGAAGTCAGGATTGAACTCATAGGCACCATCTTCCCTGAAGAAGCATTATTCCTGTCCTaGTTTCTGTTCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SFLQEVRIELIGTIFPEEALFLS*FLFILL
Trigger: AAGCAGAATGAACAGAAACCAGGACAGGAATAATGC...TTCTTCAGGGAAGATGGTGCCTATGAGTTCAATCCTGACTTCCTGGAGGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
CDS-3UTR CCA 90 bp CTCCATAGTGGTCACTCACTTAACCCAAGTGAGCCAAAAACCCTAAAGCAGGGAAGTATCTGGCATTGTTaGAAGGCAATGCATTATTCC +
Preference number: 4 (lower is better)
Translates to: LHSGHSLNPSEPKTLKQGSIWHC*KAMHYS
Trigger: GGAATAATGCATTGCCTTCCAACAATGCCAGATACT...TCCCTGCTTTAGGGTTTTTGGCTCACTTGGGTTAAGTGAGTGACCACTATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp GCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGAGGAATTCCAGTATCTaGCATTGTTGGAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: AVGQQEIEHTSSVVLSIMRNSSI*HCWKAM
Trigger: CATTGCCTTCCAACAATGCCAGATACTGGAATTCCT...CATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp CAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATGTGGGCCCTCCGGTTTaGAAACTCTGTGTAGGAATT +
Preference number: 4 (lower is better)
Translates to: QQEIEHTSSVVLSIMISHVGPPV*KLCVGI
Trigger: AATTCCTACACAGAGTTTCCAAACCGGAGGGCCCAC...ATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp ATGAAGCACACTGTGAAAAGTAACATCGTGTTCATACCGTTCTTTCATTCGGTGGTGGGCCCTCCGGTTTaGAAACTCTGTGTAGGAATT +
Preference number: 4 (lower is better)
Translates to: MKHTVKSNIVFIPFFHSVVGPPV*KLCVGI
Trigger: AATTCCTACACAGAGTTTCCAAACCGGAGGGCCCAC...CACCGAATGAAAGAACGGTATGAACACGATGTTACTTTTCACAGTGTGCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp TGTTCACTGATGATTCCCAAGTACCTAGAACACTCTTGTGTGTATGTGGACATTTTTGTAAATCCACCGTaGGCCCTCCGGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: CSLMIPKYLEHSCVYVDIFVNPP*ALRFGN
Trigger: GTTTCCAAACCGGAGGGCCCACGGTGGATTTACAAA...AATGTCCACATACACACAAGAGTGTTCTAGGTACTTGGGAATCATCAGTGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343281.9
CDS-3UTR CCA 90 bp TACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATCTGATTCCAACTATACCCAGGACTACCTaGGCCTGGAAAATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: YVLCGLVYHDLTLNLIPTIPRTT*AWKMGA
Trigger: TGCTCCCATTTTCCAGGCCCAGGTAGTCCTGGGTAT...AGTTGGAATCAGATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613078.4
CDS-3UTR TCA 90 bp ATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTAAAAATCATCCGTGCTaGAAATCAGGGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: MSMAFIYPCMTYILGCLIKNHPC*KSGPWE
Trigger: TTCCCAGGGCCCTGATTTTCAGCACGGATGATTTTT...AATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp ATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTCCAGGAAGTCAGGATTaGACTCATAGGCACCATCTT +
Preference number: 4 (lower is better)
Translates to: MSMAFIYPCMTYILGCLIPGSQD*THRHHL
Trigger: AAGATGGTGCCTATGAGTTCAATCCTGACTTCCTGG...AATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp TGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATTTTTGGTTCCATTCATaGGCTTCCTCCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: CWPTRNRAYVLCGLVYHDFWFHS*ASSRKS
Trigger: TGACTTCCTGGAGGAAGCTCATGAATGGAACCAAAA...ATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCAGCATCAGACCATGCATCTAACTCTTGAACGTTaGATTTCCAGCGAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: EKETVYSNLQNSQHQTMHLTLER*ISSECQ
Trigger: CTGACACTCGCTGGAAATTCAACGTTCAAGAGTTAG...ATGCATGGTCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GGGGTGCCTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTAATTACACATCTCTTGAGACACCATaGATGTTTCTTCTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: GVPNFLHSQTFELPTNYTSLETP*MFLLAN
Trigger: GTTAGCAAGAAGAAACATTCATGGTGTCTCAAGAGA...TGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
CDS-3UTR TCA 90 bp ATTCAGCAATCATTTAATGAGACCCTATTGCCCATAAAGAGCATTTGCCAGTTCTCAAGCCATCCATATTaGGCTGGTTATGCCACCACC +
Preference number: 4 (lower is better)
Translates to: IQQSFNETLLPIKSICQFSSHPY*AGYATT
Trigger: GGTGGTGGCATAACCAGCTCAATATGGATGGCTTGA...GAACTGGCAAATGCTCTTTATGGGCAATAGGGTCTCATTAAATGATTGCTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
CDS-3UTR TCA 90 bp CACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGCAAGTCAGGAGGGCTTaGATCTGGTCCTTTGAACCG +
Preference number: 4 (lower is better)
Translates to: HNTSQYWVFKELHKSEAMQVRRA*IWSFEP
Trigger: CGGTTCAAAGGACCAGATTCAAGCCCTCCTGACTTG...CATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp GTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCAGAAGCCATGGGAGTTaGAAAACAGATCACTTCTAC +
Preference number: 4 (lower is better)
Translates to: VGQQEIEHTSSVVLSIMIRSHGS*KTDHFY
Trigger: GTAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCT...GATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp GAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCTCTCTTGAGACACCATaGATGTTTCTTCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: EAVGQQEIEHTSSVVLSISLETP*MFLHFW
Trigger: CCAGAAATGAAGAAACATTCATGGTGTCTCAAGAGA...GATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380139.8
ENST00000613078.4
CDS-3UTR GCA 90 bp GAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCAGCATCAGACCATGCATCTGGGAAAGTCATGCTaGAATTGTCATTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: EKETVYSNLQNSQHQTMHLGKSC*NCHSIS
Trigger: GCTGATGGAATGACAATTGCAGCATGACTTTCCCAG...ATGCATGGTCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000530622.6
CDS-3UTR GCA 90 bp GAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCAGCATCAGACCATGCATTTCAAGTGCCATGACTaGATAGGGCTTCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: EKETVYSNLQNSQHQTMHFKCHD*IGLHFP
Trigger: TGGGAAATGAAGCCCTATGCAGTCATGGCACTTGAA...ATGCATGGTCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp CCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTCAAGTGCCATGACTaGATAGGGCTTCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: PTRNRAYVLCGLVYHDLTFKCHD*IGLHFP
Trigger: TGGGAAATGAAGCCCTATGCAGTCATGGCACTTGAA...TGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp AGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATTCTGCTTGGCTTTTCTaGATGAAGCACACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: SCWPTRNRAYVLCGLVYHSAWLF*MKHTVK
Trigger: TTTCACAGTGTGCTTCATGCAGAAAAGCCAAGCAGA...ATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp GAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATTGTTGGAAGGCAATaGATTATTCCTGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: EAVGQQEIEHTSSVVLSIIVGRQ*IIPVLV
Trigger: AACCAGGACAGGAATAATGCATTGCCTTCCAACAAT...GATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp CAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATCTGGGAAAGTCATGCTaGAATTGTCTGGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: QQEIEHTSSVVLSIMISHLGKSC*NCLASV
Trigger: TACACTGGCCAGACAATTGCAGCATGACTTTCCCAG...ATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp CAGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAGCCCTGGGAAAGTCATaGTGCAATTGTCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: QRTQYKSILGVQRVTQIRALGKS*CNCLAS
Trigger: ACTGGCCAGACAATTGCAGCATGACTTTCCCAGGGC...TCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp AGTTCTATGAATGATGCAAACAGCGAACACAATACAAGTCAATATTGGGTGTTCGCCCTGGGAAAGTCATaGTGCAATTGTCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SSMNDANSEHNTSQYWVFALGKS*CNCLAS
Trigger: ACTGGCCAGACAATTGCAGCATGACTTTCCCAGGGC...GAACACCCAATATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp ATGAAGCACACTGTGAAAAGTAACATCGTGTTCATACCGTTCTTTCATTCGGTGACCTATATCCTGGGGTaGCTAATTTCTTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: MKHTVKSNIVFIPFFHSVTYILG*LISCTP
Trigger: GGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGT...CACCGAATGAAAGAACGGTATGAACACGATGTTACTTTTCACAGTGTGCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp GAAAAGTTATGTAACCCAGAGCCACTTCTCCATAGTGGTCACTCACTTAACCCAATATTGAGCTGGTTATaGCACCACCCTATCAACCAA +
Preference number: 4 (lower is better)
Translates to: EKLCNPEPLLHSGHSLNPILSWL*HHPINQ
Trigger: TTGGTTGATAGGGTGGTGGCATAACCAGCTCAATAT...TGGGTTAAGTGAGTGACCACTATGGAGAAGTGGCTCTGGGTTACATAACTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp AACGTTGAATTTCCAGCGAGTGTCAGGTTCTCGGAATATAACTTCATAGTTATTGCCCTGGGAAAGTCATaGTGCAATTGTCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: NVEFPASVRFSEYNFIVIALGKS*CNCLWH
Trigger: GTGCCAGAGACAATTGCAGCATGACTTTCCCAGGGC...AATAACTATGAAGTTATATTCCGAGAACCTGACACTCGCTGGAAATTCAACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635178.1
CDS-3UTR CCA 90 bp GCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGGCATTATTCCTGTCCTaGTTTCTGTTCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: AVGQQEIEHTSSVVLSIMALFLS*FLFILL
Trigger: AAGCAGAATGAACAGAAACCAGGACAGGAATAATGC...CATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp GGGGTGCCTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTAATTACACAGCATTATTCCTGTCCTaGTTTCTGTTCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: GVPNFLHSQTFELPTNYTALFLS*FLFILL
Trigger: AAGCAGAATGAACAGAAACCAGGACAGGAATAATGC...TGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp AGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATAGGAATTCCAGTATCTaGCATTGTTGGAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: SCWPTRNRAYVLCGLVYHRNSSI*HCWKAM
Trigger: CATTGCCTTCCAACAATGCCAGATACTGGAATTCCT...ATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp ATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGAGGTGGGCCCTCCGGTTTaGAAACTCTGTGTAGGAATT +
Preference number: 4 (lower is better)
Translates to: IQVNIGCSKSYTNQKPWEVGPPV*KLCVGI
Trigger: AATTCCTACACAGAGTTTCCAAACCGGAGGGCCCAC...CTCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp ACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTATTTGTAAATCCACCGTaGGCCCTCCGGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: TRNRAYVLCGLVYHDLTLFVNPP*ALRFGN
Trigger: GTTTCCAAACCGGAGGGCCCACGGTGGATTTACAAA...TAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp CAGTATAAGAAGACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATTTTGTAAATCCACCGTaGGCCCTCCGGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: QYKKTFQSCEDLIVLMPHFVNPP*ALRFGN
Trigger: GTTTCCAAACCGGAGGGCCCACGGTGGATTTACAAA...ATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGTCTTCTTATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp TTAGAAAGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTAGGACTACCTGGGCCTaGAAAATGGGAGCATTATTA +
Preference number: 4 (lower is better)
Translates to: LERSCWPTRNRAYVLCGLRTTWA*KMGALL
Trigger: TAATAATGCTCCCATTTTCCAGGCCCAGGTAGTCCT...AAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp CAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATCCATCCATATTGAGCTaGTTATGCCACCACCCTATC +
Preference number: 4 (lower is better)
Translates to: QQEIEHTSSVVLSIMISHPSILS*LCHHPI
Trigger: GATAGGGTGGTGGCATAACCAGCTCAATATGGATGG...ATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp AGACGAGTCAAGCCATCCATATTGAGCTGGTTATGCCACCACCCTATCAACCAAATGTTTCTTCATTTCTaGCCTGAAAACTACCATGTC +
Preference number: 4 (lower is better)
Translates to: RRVKPSILSWLCHHPINQMFLHF*PENYHV
Trigger: GACATGGTAGTTTTCAGGCCAGAAATGAAGAAACAT...TTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGATGGCTTGACTCGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380139.8
ENST00000613078.4
3UTR CAA 72 bp ATCCTGGGGTGCCTAATTTCTTGCACTCCCAAACATTaGAGCTGCCGACTAATTACACATGTTAATAGGCAT +
Preference number: 4 (lower is better)
Translates to: ILGCLISCTPKH*SCRLITHVNRH
Trigger: ATGCCTATTAACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
3UTR CAA 72 bp CTAGTGAATGGTAGAGCTTGGATGTGGAGCCATAAATaGACTCCAAGGTCAGAGCTCTTTAACATAGCCATT +
Preference number: 4 (lower is better)
Translates to: LVNGRAWMWSHK*TPRSELFNIAI
Trigger: AATGGCTATGTTAAAGAGCTCTGACCTTGGAGTCAATTTATGGCTCCACATCCAAGCTCTACCATTCACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR TCA 90 bp ATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGAGAGCCTCCCAAAAGATTaGAGGAAACTGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: IQVNIGCSKSYTNQKPWESLPKD*RKLSSM
Trigger: CATGGAGGACAGTTTCCTTCAATCTTTTGGGAGGCT...CTCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
CDS-3UTR TCA 90 bp AGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATCTGATTAAAAATCATCCGTGCTaGAAATCAGGGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RAYVLCGLVYHDLTLNLIKNHPC*KSGPWE
Trigger: TTCCCAGGGCCCTGATTTTCAGCACGGATGATTTTT...AATCAGATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp TTTGCTCAGAAACTTTTGAGTTCAGCTATTTACACTGGAATTGGAGCTCTGACTAAAAATCATCCGTGCTaGAAATCAGGGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FAQKLLSSAIYTGIGALTKNHPC*KSGPWE
Trigger: TTCCCAGGGCCCTGATTTTCAGCACGGATGATTTTT...AGTCAGAGCTCCAATTCCAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GACTTTGCTCAGAAACTTTTGAGTTCAGCTATTTACACTGGAATTGGAGCTCTGTTTTGGTTCCATTCATaGGCTTCCTCCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: DFAQKLLSSAIYTGIGALFWFHS*ASSRKS
Trigger: TGACTTCCTGGAGGAAGCTCATGAATGGAACCAAAA...CAGAGCTCCAATTCCAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp AGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATTATTTTCAAGTGCCATaGCTGCATAGGGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: SCWPTRNRAYVLCGLVYHYFQVP*LHRASF
Trigger: AAATGAAGCCCTATGCAGTCATGGCACTTGAAAATA...ATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GTGCTTGGAGATACAGAAGTTAGCAAAGCTGATAACACCTTAGATTCATTGGGACTAACTCTTGAACGTTaGATTTCCAGCGAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: VLGDTEVSKADNTLDSLGLTLER*ISSECQ
Trigger: CTGACACTCGCTGGAAATTCAACGTTCAAGAGTTAG...TCCCAATGAATCTAAGGTGTTATCAGCTTTGCTAACTTCTGTATCTCCAAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380130.7
ENST00000635608.1
CDS-3UTR TCA 90 bp GAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTTCCTTCTTGCTAACTCTTaGACGTTGAATTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: EHGFYISLYDLYPGVPNFLLANS*TLNFQR
Trigger: TCGCTGGAAATTCAACGTTCAAGAGTTAGCAAGAAG...GAAATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
CDS-3UTR TCA 90 bp TGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTTCTTGCTAACTCTTaGACGTTGAATTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: CWPTRNRAYVLCGLVYHDLLANS*TLNFQR
Trigger: TCGCTGGAAATTCAACGTTCAAGAGTTAGCAAGAAG...ATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000635178.1
CDS-3UTR TCA 90 bp TTAGAAAGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTCTTCTTGCTAACTCTTaGACGTTGAATTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: LERSCWPTRNRAYVLCGLLLANS*TLNFQR
Trigger: TCGCTGGAAATTCAACGTTCAAGAGTTAGCAAGAAG...AAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCTTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
CDS-3UTR TCA 90 bp AGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATTCTCTTGAGACACCATaGATGTTTCTTCTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: SCWPTRNRAYVLCGLVYHSLETP*MFLLAN
Trigger: GTTAGCAAGAAGAAACATTCATGGTGTCTCAAGAGA...ATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000635178.1
CDS-3UTR TCA 90 bp AGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATTCTCTTGAGACACCATaGATGTTTCTTCTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: RSCWPTRNRAYVLCGLVYSLETP*MFLLAN
Trigger: GTTAGCAAGAAGAAACATTCATGGTGTCTCAAGAGA...ATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000635178.1
CDS-3UTR TCA 90 bp GAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCTTGCTCAGAAACTTTTaGGTTCAGCTATTTACACTG +
Preference number: 4 (lower is better)
Translates to: EAVGQQEIEHTSSVVLSILLRNF*VQLFTL
Trigger: CAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAA...GATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp CACAAATCAGAAGCCATGGGAGTTGAAAAACAGATCACTTCTACAGGGGATAAATTATATATCCCTGTATaGCCTATATCCTGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: HKSEAMGVEKQITSTGDKLYIPV*PISWGA
Trigger: GGCACCCCAGGATATAGGTCATACAGGGATATATAA...TTTATCCCCTGTAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCTGATTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR TCA 90 bp AGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATGACATTCCAGAGTTGTaGGGACTTGATTGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: RSCWPTRNRAYVLCGLVYDIPEL*GLDCLN
Trigger: ATTAAGACAATCAAGTCCTCACAACTCTGGAATGTC...ATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp AAGAAGACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATAAAACATCAAGCCATCCATATTaGGCTGGTTATGCCACCACC +
Preference number: 4 (lower is better)
Translates to: KKTFQSCEDLIVLMPHKTSSHPY*AGYATT
Trigger: GGTGGTGGCATAACCAGCTCAATATGGATGGCTTGA...TGTTTTATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGTCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR TCA 90 bp AAGCCATGGGAGTTGAAAAACAGATCACTTCTACAGGGGATAAAGTTGATGGCATTGAATCTGGTCCTTTaGACCGCTCATGTGAAATCA +
Preference number: 4 (lower is better)
Translates to: KPWELKNRSLLQGIKLMALNLVL*TAHVKS
Trigger: TGATTTCACATGAGCGGTTCAAAGGACCAGATTCAA...TGCCATCAACTTTATCCCCTGTAGAAGTGATCTGTTTTTCAACTCCCATGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp TGGTTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATCAAGTCAGGAGGGCTTaGATCTGGTCCTTTGAACCG +
Preference number: 4 (lower is better)
Translates to: WFQILTLEKETVYSNLQNQVRRA*IWSFEP
Trigger: CGGTTCAAAGGACCAGATTCAAGCCCTCCTGACTTG...ATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR TCA 90 bp AGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATTCTTCATTTCTGGCCTaGAAACTACCATGTCCATTT +
Preference number: 4 (lower is better)
Translates to: RSCWPTRNRAYVLCGLVYSSFLA*KLPCPF
Trigger: AAATGGACATGGTAGTTTTCAGGCCAGAAATGAAGA...ATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380139.8
ENST00000613078.4
CDS-3UTR TCA 90 bp ATGAAGCACACTGTGAAAAGTAACATCGTGTTCATACCGTTCTTTCATTCGGTGTGCCTTGCTAACTCTTaGACGTTGAATTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: MKHTVKSNIVFIPFFHSVCLANS*TLNFQR
Trigger: TCGCTGGAAATTCAACGTTCAAGAGTTAGCAAGGCA...CACCGAATGAAAGAACGGTATGAACACGATGTTACTTTTCACAGTGTGCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635608.1
CDS-3UTR GCA 90 bp CAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTTCAAGTGCCATGACTaGATAGGGCTTCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: QQEIEHTSSVVLSIMISHFKCHD*IGLHFP
Trigger: TGGGAAATGAAGCCCTATGCAGTCATGGCACTTGAA...ATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp GTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCATTGTTGGAAGGCAATaGATTATTCCTGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: VGQQEIEHTSSVVLSIMIIVGRQ*IIPVLV
Trigger: AACCAGGACAGGAATAATGCATTGCCTTCCAACAAT...GATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp GGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCAATTGTTGGAAGGCAATaGATTATTCCTGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GQQEIEHTSSVVLSIMISIVGRQ*IIPVLV
Trigger: AACCAGGACAGGAATAATGCATTGCCTTCCAACAAT...TGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp AGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCTGTTTACTCAAATCTaGAGAATTCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: RSCWPTRNRAYVLCGLVYLFTQI*RIPSIR
Trigger: TCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAG...ATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp ATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGAGCTGGGAAAGTCATGCTaGAATTGTCTGGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: IQVNIGCSKSYTNQKPWELGKSC*NCLASV
Trigger: TACACTGGCCAGACAATTGCAGCATGACTTTCCCAG...CTCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp TGCACTCCCAAACATTTGAGCTGCCGACTAATTACACATGTTAATAGGCATAATACCTATATCCTGGGGTaGCTAATTTCTTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: CTPKHLSCRLITHVNRHNTYILG*LISCTP
Trigger: GGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGT...ATTATGCCTATTAACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp CAGTATAAGAAGACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATGTTCTATCTTTATGGTaGTCAGGAGCCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: QYKKTFQSCEDLIVLMPHVLSLW*SGASGT
Trigger: TGTGCCAGAGGCTCCTGACCACCATAAAGATAGAAC...ATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGTCTTCTTATACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS-3UTR CCA 90 bp TGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCAGTATCTGGCATTGTTaGAAGGCAATGCATTATTCC +
Preference number: 4 (lower is better)
Translates to: WPTRNRAYVLCGLVYHDLSIWHC*KAMHYS
Trigger: GGAATAATGCATTGCCTTCCAACAATGCCAGATACT...GAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp CCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACAAGGAATTCCAGTATCTaGCATTGTTGGAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: PTRNRAYVLCGLVYHDLTRNSSI*HCWKAM
Trigger: CATTGCCTTCCAACAATGCCAGATACTGGAATTCCT...TGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp CAATCATTTAATGAGACCCTATTGCCCATAAAGAGCATTTGCCAGTTCTATGAATTTGTAAATCCACCGTaGGCCCTCCGGTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: QSFNETLLPIKSICQFYEFVNPP*ALRFGN
Trigger: GTTTCCAAACCGGAGGGCCCACGGTGGATTTACAAA...TTCATAGAACTGGCAAATGCTCTTTATGGGCAATAGGGTCTCATTAAATGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp TTTGCTCAGAAACTTTTGAGTTCAGCTATTTACACTGGAATTGGAGCTCTGACTCCATCCATATTGAGCTaGTTATGCCACCACCCTATC +
Preference number: 4 (lower is better)
Translates to: FAQKLLSSAIYTGIGALTPSILS*LCHHPI
Trigger: GATAGGGTGGTGGCATAACCAGCTCAATATGGATGG...AGTCAGAGCTCCAATTCCAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR TCA 90 bp TTTTATGGTTTACAAACCAAATATTTCAGGGGTCAGCTAGGGAAAGAAGAGACAAAAAATCATCCGTGCTaGAAATCAGGGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FYGLQTKYFRGQLGKEETKNHPC*KSGPWE
Trigger: TTCCCAGGGCCCTGATTTTCAGCACGGATGATTTTT...TGTCTCTTCTTTCCCTAGCTGACCCCTGAAATATTTGGTTTGTAAACCATAAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp ACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATAAAACATCAACTAAAAATCATCCGTGCTaGAAATCAGGGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TFQSCEDLIVLMPHKTSTKNHPC*KSGPWE
Trigger: TTCCCAGGGCCCTGATTTTCAGCACGGATGATTTTT...AGTTGATGTTTTATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp ACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATAAAACATCAACTCCAGGAAGTCAGGATTaGACTCATAGGCACCATCTT +
Preference number: 4 (lower is better)
Translates to: TFQSCEDLIVLMPHKTSTPGSQD*THRHHL
Trigger: AAGATGGTGCCTATGAGTTCAATCCTGACTTCCTGG...AGTTGATGTTTTATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp AGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATCCAGGAAGTCAGGATTaGACTCATAGGCACCATCTT +
Preference number: 4 (lower is better)
Translates to: RNRAYVLCGLVYHDLTLNPGSQD*THRHHL
Trigger: AAGATGGTGCCTATGAGTTCAATCCTGACTTCCTGG...ATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp TGCACTCCCAAACATTTGAGCTGCCGACTAATTACACATGTTAATAGGCATAATTTTTGGTTCCATTCATaGGCTTCCTCCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: CTPKHLSCRLITHVNRHNFWFHS*ASSRKS
Trigger: TGACTTCCTGGAGGAAGCTCATGAATGGAACCAAAA...ATTATGCCTATTAACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GTAATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTATATTTTCAAGTGCCATaGCTGCATAGGGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: VMSMAFIYPCMTYILGCLYFQVP*LHRASF
Trigger: AAATGAAGCCCTATGCAGTCATGGCACTTGAAAATA...TAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380130.7
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCAGCATCAGACCATGCATTCTCTTGAGACACCATaGATGTTTCTTCTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: EKETVYSNLQNSQHQTMHSLETP*MFLLAN
Trigger: GTTAGCAAGAAGAAACATTCATGGTGTCTCAAGAGA...ATGCATGGTCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
CDS-3UTR TCA 90 bp TGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATTCTCTTGAGACACCATaGATGTTTCTTCTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: CWPTRNRAYVLCGLVYHDSLETP*MFLLAN
Trigger: GTTAGCAAGAAGAAACATTCATGGTGTCTCAAGAGA...ATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000635178.1
CDS-3UTR TCA 90 bp AGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATTTGCTCAGAAACTTTTaGGTTCAGCTATTTACACTG +
Preference number: 4 (lower is better)
Translates to: RSCWPTRNRAYVLCGLVYLLRNF*VQLFTL
Trigger: CAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAA...ATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTTCGACATTCCAGAGTTGTaGGGACTTGATTGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: EHGFYISLYDLYPGVPNFDIPEL*GLDCLN
Trigger: ATTAAGACAATCAAGTCCTCACAACTCTGGAATGTC...GAAATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GACTTTGCTCAGAAACTTTTGAGTTCAGCTATTTACACTGGAATTGGAGCTCTGTTGAATCTGGTCCTTTaGACCGCTCATGTGAAATCA +
Preference number: 4 (lower is better)
Translates to: DFAQKLLSSAIYTGIGALLNLVL*TAHVKS
Trigger: TGATTTCACATGAGCGGTTCAAAGGACCAGATTCAA...CAGAGCTCCAATTCCAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR TCA 90 bp ATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTTTGAATCTGGTCCTTTaGACCGCTCATGTGAAATCA +
Preference number: 4 (lower is better)
Translates to: MSMAFIYPCMTYILGCLILNLVL*TAHVKS
Trigger: TGATTTCACATGAGCGGTTCAAAGGACCAGATTCAA...AATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR TCA 90 bp AGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTTCTTGCCAGTTCTATGAATaGTGCAAACAGCGAACACAA +
Preference number: 4 (lower is better)
Translates to: SMAFIYPCMTYILGCLISCQFYE*CKQRTQ
Trigger: TTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCA...AGAAATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR TCA 90 bp CAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTGCCAGTTCTATGAATaGTGCAAACAGCGAACACAA +
Preference number: 4 (lower is better)
Translates to: QQEIEHTSSVVLSIMISHCQFYE*CKQRTQ
Trigger: TTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCA...ATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp CACAAATCAGAAGCCATGGGAGTTGAAAAACAGATCACTTCTACAGGGGATAAACATTTGCCAGTTCTATaGATGATGCAAACAGCGAAC +
Preference number: 4 (lower is better)
Translates to: HKSEAMGVEKQITSTGDKHLPVL*MMQTAN
Trigger: GTTCGCTGTTTGCATCATTCATAGAACTGGCAAATG...TTTATCCCCTGTAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCTGATTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp GACTTTGCTCAGAAACTTTTGAGTTCAGCTATTTACACTGGAATTGGAGCTCTGAAATGGGAAGGCGGCTaGATCTTTGATCCCAATTTT +
Preference number: 4 (lower is better)
Translates to: DFAQKLLSSAIYTGIGALKWEGG*IFDPNF
Trigger: AAAATTGGGATCAAAGATGCAGCCGCCTTCCCATTT...CAGAGCTCCAATTCCAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343281.9
CDS-3UTR GCA 90 bp GGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCAATAGTTATTTTCAAGTaGCATGACTGCATAGGGCTT +
Preference number: 4 (lower is better)
Translates to: GQQEIEHTSSVVLSIMISIVIFK*HDCIGL
Trigger: AAGCCCTATGCAGTCATGGCACTTGAAAATAACTAT...TGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp AAAGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATAGTTATTTTCAAGTaGCATGACTGCATAGGGCTT +
Preference number: 4 (lower is better)
Translates to: KEAVGQQEIEHTSSVVLSIVIFK*HDCIGL
Trigger: AAGCCCTATGCAGTCATGGCACTTGAAAATAACTAT...AGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp ATGAAGCACACTGTGAAAAGTAACATCGTGTTCATACCGTTCTTTCATTCGGTGTCTGCTTGGCTTTTCTaGATGAAGCACACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: MKHTVKSNIVFIPFFHSVSAWLF*MKHTVK
Trigger: TTTCACAGTGTGCTTCATGCAGAAAAGCCAAGCAGA...CACCGAATGAAAGAACGGTATGAACACGATGTTACTTTTCACAGTGTGCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp GGGATTTTTGTCTCCTTTGTCCACTGCTCCATTCTGAGCATCTCAGTACTAATTATTGTTGGAAGGCAATaGATTATTCCTGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GIFVSFVHCSILSISVLIIVGRQ*IIPVLV
Trigger: AACCAGGACAGGAATAATGCATTGCCTTCCAACAAT...AATTAGTACTGAGATGCTCAGAATGGAGCAGTGGACAAAGGAGACAAAAATCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343281.9
CDS-3UTR GCA 90 bp CCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACACCCAAACATTTGAGCTaGCGACTAATTACACATGTT +
Preference number: 4 (lower is better)
Translates to: PTRNRAYVLCGLVYHDLTPKHLS*RLITHV
Trigger: AACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGG...TGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp CAGTATAAGAAGACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATGGGTGCCTAATTTCTTaGACTCCCAAACATTTGAGC +
Preference number: 4 (lower is better)
Translates to: QYKKTFQSCEDLIVLMPHGCLIS*TPKHLS
Trigger: GCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCC...ATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGTCTTCTTATACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp CTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTAATTACACATGTTAATACCTATATCCTGGGGTaGCTAATTTCTTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: LISCTPKHLSCRLITHVNTYILG*LISCTP
Trigger: GGGAGTGCAAGAAATTAGGCACCCCAGGATATAGGT...ATTAACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp TTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCCAGTTCTATCTTTATaGTGGTCAGGAGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: FQILTLEKETVYSNLQNSPVLSL*WSGASG
Trigger: GCCAGAGGCTCCTGACCACCATAAAGATAGAACTGG...GGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343281.9
ENST00000459716.6
CDS-3UTR CCA 90 bp TTAGAAAGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTAGTATCTGGCATTGTTaGAAGGCAATGCATTATTCC +
Preference number: 4 (lower is better)
Translates to: LERSCWPTRNRAYVLCGLSIWHC*KAMHYS
Trigger: GGAATAATGCATTGCCTTCCAACAATGCCAGATACT...AAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCTTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp ATGAAGCACACTGTGAAAAGTAACATCGTGTTCATACCGTTCTTTCATTCGGTGAGGAATTCCAGTATCTaGCATTGTTGGAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: MKHTVKSNIVFIPFFHSVRNSSI*HCWKAM
Trigger: CATTGCCTTCCAACAATGCCAGATACTGGAATTCCT...CACCGAATGAAAGAACGGTATGAACACGATGTTACTTTTCACAGTGTGCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp TTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCGTGGGCCCTCCGGTTTaGAAACTCTGTGTAGGAATT +
Preference number: 4 (lower is better)
Translates to: FQILTLEKETVYSNLQNSVGPPV*KLCVGI
Trigger: AATTCCTACACAGAGTTTCCAAACCGGAGGGCCCAC...GGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp TTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCCAGGAAGTCAGGATTaGACTCATAGGCACCATCTT +
Preference number: 4 (lower is better)
Translates to: FQILTLEKETVYSNLQNSPGSQD*THRHHL
Trigger: AAGATGGTGCCTATGAGTTCAATCCTGACTTCCTGG...GGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp AGTTCTATGAATGATGCAAACAGCGAACACAATACAAGTCAATATTGGGTGTTCTTTTGGTTCCATTCATaGGCTTCCTCCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SSMNDANSEHNTSQYWVFFWFHS*ASSRKS
Trigger: TGACTTCCTGGAGGAAGCTCATGAATGGAACCAAAA...GAACACCCAATATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp ACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATAAAACATCAACTTTTTGGTTCCATTCATaGGCTTCCTCCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: TFQSCEDLIVLMPHKTSTFWFHS*ASSRKS
Trigger: TGACTTCCTGGAGGAAGCTCATGAATGGAACCAAAA...AGTTGATGTTTTATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp GAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCTTTTGGTTCCATTCATaGGCTTCCTCCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: EHNTSQYWVFKELHKSEAFWFHS*ASSRKS
Trigger: TGACTTCCTGGAGGAAGCTCATGAATGGAACCAAAA...GGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp AGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTTCTTATTTTCAAGTGCCATaGCTGCATAGGGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: SMAFIYPCMTYILGCLISYFQVP*LHRASF
Trigger: AAATGAAGCCCTATGCAGTCATGGCACTTGAAAATA...AGAAATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380130.7
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp AGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATCTAACTCTTGAACGTTaGATTTCCAGCGAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: RNRAYVLCGLVYHDLTLNLTLER*ISSECQ
Trigger: CTGACACTCGCTGGAAATTCAACGTTCAAGAGTTAG...ATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp ACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTACTTCTTGCTAACTCTTaGACGTTGAATTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: TRNRAYVLCGLVYHDLTLLLANS*TLNFQR
Trigger: TCGCTGGAAATTCAACGTTCAAGAGTTAGCAAGAAG...TAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
CDS-3UTR TCA 90 bp AATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGATTATATATCCCTGTATaGCCTATATCCTGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: NTSQYWVFKELHKSEAMGLYIPV*PISWGA
Trigger: GGCACCCCAGGATATAGGTCATACAGGGATATATAA...TCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR TCA 90 bp AACGTTGAATTTCCAGCGAGTGTCAGGTTCTCGGAATATAACTTCATAGTTATTTTATATATCCCTGTATaGCCTATATCCTGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: NVEFPASVRFSEYNFIVILYIPV*PISWGA
Trigger: GGCACCCCAGGATATAGGTCATACAGGGATATATAA...AATAACTATGAAGTTATATTCCGAGAACCTGACACTCGCTGGAAATTCAACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459716.6
ENST00000635178.1
CDS-3UTR TCA 90 bp AGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATTTATATATCCCTGTATaGCCTATATCCTGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RNRAYVLCGLVYHDLTLNLYIPV*PISWGA
Trigger: GGCACCCCAGGATATAGGTCATACAGGGATATATAA...ATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp TTTGTAATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCGACATTCCAGAGTTGTaGGGACTTGATTGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: FVMSMAFIYPCMTYILGCDIPEL*GLDCLN
Trigger: ATTAAGACAATCAAGTCCTCACAACTCTGGAATGTC...GCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCATTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp AGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTTCTGACATTCCAGAGTTGTaGGGACTTGATTGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: SMAFIYPCMTYILGCLISDIPEL*GLDCLN
Trigger: ATTAAGACAATCAAGTCCTCACAACTCTGGAATGTC...AGAAATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp AGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATCTGATTTGCCAGTTCTATGAATaGTGCAAACAGCGAACACAA +
Preference number: 4 (lower is better)
Translates to: RAYVLCGLVYHDLTLNLICQFYE*CKQRTQ
Trigger: TTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCA...AATCAGATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp TGCACTCCCAAACATTTGAGCTGCCGACTAATTACACATGTTAATAGGCATAATCATTTGCCAGTTCTATaGATGATGCAAACAGCGAAC +
Preference number: 4 (lower is better)
Translates to: CTPKHLSCRLITHVNRHNHLPVL*MMQTAN
Trigger: GTTCGCTGTTTGCATCATTCATAGAACTGGCAAATG...ATTATGCCTATTAACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR TCA 90 bp AGTGTCTACTTTGAAGGACAATGTTCCCTTAGATGTATGCTTTCTGGCATATTACGGTCTGAAATACCATaGCTGCATAGGGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: SVYFEGQCSLRCMLSGILRSEIP*LHRASF
Trigger: AAATGAAGCCCTATGCAGTCATGGTATTTCAGACCG...TAATATGCCAGAAAGCATACATCTAAGGGAACATTGTCCTTCAAAGTAGACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380139.8
CDS-3UTR TCA 90 bp CAGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGACGGTCTGAAATACCATaGCTGCATAGGGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: QRTQYKSILGVQRVTQIRRSEIP*LHRASF
Trigger: AAATGAAGCCCTATGCAGTCATGGTATTTCAGACCG...TCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380139.8
ENST00000613078.4
CDS-3UTR TCA 90 bp TTTGTAATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCTCTCTTGAGACACCATaGATGTTTCTTCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: FVMSMAFIYPCMTYILGCSLETP*MFLHFW
Trigger: CCAGAAATGAAGAAACATTCATGGTGTCTCAAGAGA...GCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCATTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380139.8
CDS-3UTR GCA 90 bp AACGTTGAATTTCCAGCGAGTGTCAGGTTCTCGGAATATAACTTCATAGTTATTTTCAAGTGCCATGACTaGATAGGGCTTCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: NVEFPASVRFSEYNFIVIFKCHD*IGLHFP
Trigger: TGGGAAATGAAGCCCTATGCAGTCATGGCACTTGAA...AATAACTATGAAGTTATATTCCGAGAACCTGACACTCGCTGGAAATTCAACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
CDS-3UTR GCA 90 bp TTTGCTCAGAAACTTTTGAGTTCAGCTATTTACACTGGAATTGGAGCTCTGACTTCTGCTTGGCTTTTCTaGATGAAGCACACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: FAQKLLSSAIYTGIGALTSAWLF*MKHTVK
Trigger: TTTCACAGTGTGCTTCATGCAGAAAAGCCAAGCAGA...AGTCAGAGCTCCAATTCCAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp CAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATATTGTTGGAAGGCAATaGATTATTCCTGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: QQEIEHTSSVVLSIMISHIVGRQ*IIPVLV
Trigger: AACCAGGACAGGAATAATGCATTGCCTTCCAACAAT...ATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp GTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATCTGATTCCAACCTGTCTGTTTACTCAAATCTaGAGAATTCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: VLCGLVYHDLTLNLIPTCLFTQI*RIPSIR
Trigger: TCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAG...ACAGGTTGGAATCAGATTTAATGTGAGATCATGATAGACAAGACCACAGAGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp TGGTTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCTGTGCTGCTTAAATaGGAAGGCGGCTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: WFQILTLEKETVYSNLQNSVLLK*EGGCIF
Trigger: AAAGATGCAGCCGCCTTCCCATTTAAGCAGCACAGA...ATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343281.9
CDS-3UTR CCA 90 bp CTCTTGAACGTTGAATTTCCAGCGAGTGTCAGGTTCTCGGAATATAACTTCATAGCATTATTCCTGTCCTaGTTTCTGTTCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LLNVEFPASVRFSEYNFIALFLS*FLFILL
Trigger: AAGCAGAATGAACAGAAACCAGGACAGGAATAATGC...TATGAAGTTATATTCCGAGAACCTGACACTCGCTGGAAATTCAACGTTCAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
CDS-3UTR CCA 90 bp CTCTTGAACGTTGAATTTCCAGCGAGTGTCAGGTTCTCGGAATATAACTTCATAAGTATCTGGCATTGTTaGAAGGCAATGCATTATTCC +
Preference number: 4 (lower is better)
Translates to: LLNVEFPASVRFSEYNFISIWHC*KAMHYS
Trigger: GGAATAATGCATTGCCTTCCAACAATGCCAGATACT...TATGAAGTTATATTCCGAGAACCTGACACTCGCTGGAAATTCAACGTTCAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
CDS-3UTR CCA 90 bp CAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATAGTATCTGGCATTGTTaGAAGGCAATGCATTATTCC +
Preference number: 4 (lower is better)
Translates to: QQEIEHTSSVVLSIMISHSIWHC*KAMHYS
Trigger: GGAATAATGCATTGCCTTCCAACAATGCCAGATACT...ATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp ATGAAGCACACTGTGAAAAGTAACATCGTGTTCATACCGTTCTTTCATTCGGTGAGTATCTGGCATTGTTaGAAGGCAATGCATTATTCC +
Preference number: 4 (lower is better)
Translates to: MKHTVKSNIVFIPFFHSVSIWHC*KAMHYS
Trigger: GGAATAATGCATTGCCTTCCAACAATGCCAGATACT...CACCGAATGAAAGAACGGTATGAACACGATGTTACTTTTCACAGTGTGCTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp TGCACTCCCAAACATTTGAGCTGCCGACTAATTACACATGTTAATAGGCATAATAGGAATTCCAGTATCTaGCATTGTTGGAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: CTPKHLSCRLITHVNRHNRNSSI*HCWKAM
Trigger: CATTGCCTTCCAACAATGCCAGATACTGGAATTCCT...ATTATGCCTATTAACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp CAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGAGTTGAAAAAAGGACTACCTGGGCCTaGAAAATGGGAGCATTATTA +
Preference number: 4 (lower is better)
Translates to: QYWVFKELHKSEAMGVEKRTTWA*KMGALL
Trigger: TAATAATGCTCCCATTTTCCAGGCCCAGGTAGTCCT...TTTTTCAACTCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp AATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGACTGAAGTCACGGTCTTaGCCAAAGCTGTTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: NTSQYWVFKELHKSEAMGLKSRS*PKLLFL
Trigger: CAAAAACAACAGCTTTGGCCAAGACCGTGACTTCAG...TCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613078.4
CDS-3UTR TCA 90 bp ACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTATATTTTCAAGTGCCATaGCTGCATAGGGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: TRNRAYVLCGLVYHDLTLYFQVP*LHRASF
Trigger: AAATGAAGCCCTATGCAGTCATGGCACTTGAAAATA...TAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp TGCACTCCCAAACATTTGAGCTGCCGACTAATTACACATGTTAATAGGCATAATTATTTTCAAGTGCCATaGCTGCATAGGGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: CTPKHLSCRLITHVNRHNYFQVP*LHRASF
Trigger: AAATGAAGCCCTATGCAGTCATGGCACTTGAAAATA...ATTATGCCTATTAACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380130.7
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp ATGCAAACAGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACATTGAATCTGGTCCTTTaGACCGCTCATGTGAAATCA +
Preference number: 4 (lower is better)
Translates to: MQTANTIQVNIGCSKSYTLNLVL*TAHVKS
Trigger: TGATTTCACATGAGCGGTTCAAAGGACCAGATTCAA...TGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCTGTTTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp CAATCATTTAATGAGACCCTATTGCCCATAAAGAGCATTTGCCAGTTCTATGAAAGAAGCCATGGGAGTTaGAAAACAGATCACTTCTAC +
Preference number: 4 (lower is better)
Translates to: QSFNETLLPIKSICQFYERSHGS*KTDHFY
Trigger: GTAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCT...TTCATAGAACTGGCAAATGCTCTTTATGGGCAATAGGGTCTCATTAAATGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp AATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGAAGAAGCCATGGGAGTTaGAAAACAGATCACTTCTAC +
Preference number: 4 (lower is better)
Translates to: NTSQYWVFKELHKSEAMGRSHGS*KTDHFY
Trigger: GTAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCT...TCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp CAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATATAGTTATTTTCAAGTaGCATGACTGCATAGGGCTT +
Preference number: 4 (lower is better)
Translates to: QQEIEHTSSVVLSIMISHIVIFK*HDCIGL
Trigger: AAGCCCTATGCAGTCATGGCACTTGAAAATAACTAT...ATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp TTTGTAATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCATAGTTATTTTCAAGTaGCATGACTGCATAGGGCTT +
Preference number: 4 (lower is better)
Translates to: FVMSMAFIYPCMTYILGCIVIFK*HDCIGL
Trigger: AAGCCCTATGCAGTCATGGCACTTGAAAATAACTAT...GCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCATTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380130.7
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp CACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGTCTGCTTGGCTTTTCTaGATGAAGCACACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: HNTSQYWVFKELHKSEAMSAWLF*MKHTVK
Trigger: TTTCACAGTGTGCTTCATGCAGAAAAGCCAAGCAGA...CATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp CTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTAATTACACATGTTAATTCTGCTTGGCTTTTCTaGATGAAGCACACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: LISCTPKHLSCRLITHVNSAWLF*MKHTVK
Trigger: TTTCACAGTGTGCTTCATGCAGAAAAGCCAAGCAGA...ATTAACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp GTCTACTTTGAAGGACAATGTTCCCTTAGATGTATGCTTTCTGGCATATTAACATCTGCTTGGCTTTTCTaGATGAAGCACACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: VYFEGQCSLRCMLSGILTSAWLF*MKHTVK
Trigger: TTTCACAGTGTGCTTCATGCAGAAAAGCCAAGCAGA...TGTTAATATGCCAGAAAGCATACATCTAAGGGAACATTGTCCTTCAAAGTAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp ATTCAGCAATCATTTAATGAGACCCTATTGCCCATAAAGAGCATTTGCCAGTTCCCCAAACATTTGAGCTaGCGACTAATTACACATGTT +
Preference number: 4 (lower is better)
Translates to: IQQSFNETLLPIKSICQFPKHLS*RLITHV
Trigger: AACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGG...GAACTGGCAAATGCTCTTTATGGGCAATAGGGTCTCATTAAATGATTGCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380130.7
ENST00000380139.8
CDS-3UTR GCA 90 bp TGGTTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATGGGTGCCTAATTTCTTaGACTCCCAAACATTTGAGC +
Preference number: 4 (lower is better)
Translates to: WFQILTLEKETVYSNLQNGCLIS*TPKHLS
Trigger: GCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCC...ATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp CAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGAGTTGAAAAAATATTGAGCTGGTTATaGCACCACCCTATCAACCAA +
Preference number: 4 (lower is better)
Translates to: QYWVFKELHKSEAMGVEKILSWL*HHPINQ
Trigger: TTGGTTGATAGGGTGGTGGCATAACCAGCTCAATAT...TTTTTCAACTCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp CACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGATATTGAGCTGGTTATaGCACCACCCTATCAACCAA +
Preference number: 4 (lower is better)
Translates to: HNTSQYWVFKELHKSEAMILSWL*HHPINQ
Trigger: TTGGTTGATAGGGTGGTGGCATAACCAGCTCAATAT...CATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp AGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATATATTGAGCTGGTTATaGCACCACCCTATCAACCAA +
Preference number: 4 (lower is better)
Translates to: RNRAYVLCGLVYHDLTLNILSWL*HHPINQ
Trigger: TTGGTTGATAGGGTGGTGGCATAACCAGCTCAATAT...ATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp ACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAGTATCTGGCATTGTTaGAAGGCAATGCATTATTCC +
Preference number: 4 (lower is better)
Translates to: TRNRAYVLCGLVYHDLTLSIWHC*KAMHYS
Trigger: GGAATAATGCATTGCCTTCCAACAATGCCAGATACT...TAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp AGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATAGGAATTCCAGTATCTaGCATTGTTGGAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: RNRAYVLCGLVYHDLTLNRNSSI*HCWKAM
Trigger: CATTGCCTTCCAACAATGCCAGATACTGGAATTCCT...ATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp CTTTTGAGTTCAGCTATTTACACTGGAATTGGAGCTCTGACTAAAATGCAACAAGTTCTATCTTTATGGTaGTCAGGAGCCTCATGCATT +
Preference number: 4 (lower is better)
Translates to: LLSSAIYTGIGALTKMQQVLSLW*SGASCI
Trigger: AATGCATGAGGCTCCTGACCACCATAAAGATAGAAC...TTGTTGCATTTTAGTCAGAGCTCCAATTCCAGTGTAAATAGCTGAACTCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530622.6
CDS-3UTR TCA 90 bp CTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTAATTACACATGTTAATTCTCTTGAGACACCATaGATGTTTCTTCTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: LISCTPKHLSCRLITHVNSLETP*MFLLAN
Trigger: GTTAGCAAGAAGAAACATTCATGGTGTCTCAAGAGA...ATTAACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
CDS-3UTR TCA 90 bp TTTGCTCAGAAACTTTTGAGTTCAGCTATTTACACTGGAATTGGAGCTCTGACTTTGCTCAGAAACTTTTaGGTTCAGCTATTTACACTG +
Preference number: 4 (lower is better)
Translates to: FAQKLLSSAIYTGIGALTLLRNF*VQLFTL
Trigger: CAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAA...AGTCAGAGCTCCAATTCCAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp CTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTAATTACACATGTTAATGACATTCCAGAGTTGTaGGGACTTGATTGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: LISCTPKHLSCRLITHVNDIPEL*GLDCLN
Trigger: ATTAAGACAATCAAGTCCTCACAACTCTGGAATGTC...ATTAACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp ACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTATTTGAACCGCTCATGTaGAATCAAAGGATGGTAATT +
Preference number: 4 (lower is better)
Translates to: TRNRAYVLCGLVYHDLTLFEPLM*NQRMVI
Trigger: AATTACCATCCTTTGATTTCACATGAGCGGTTCAAA...TAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp AGCAAAGCTGATAACACCTTAGATTCATTGGGATTTACTATTGTCAGCCAAACTTCTTCATTTCTGGCCTaGAAACTACCATGTCCATTT +
Preference number: 4 (lower is better)
Translates to: SKADNTLDSLGFTIVSQTSSFLA*KLPCPF
Trigger: AAATGGACATGGTAGTTTTCAGGCCAGAAATGAAGA...AGTTTGGCTGACAATAGTAAATCCCAATGAATCTAAGGTGTTATCAGCTTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380139.8
ENST00000613078.4
CDS-3UTR TCA 90 bp AGCAAAGCTGATAACACCTTAGATTCATTGGGATTTACTATTGTCAGCCAAACTTCTCTTGAGACACCATaGATGTTTCTTCAGAGATTC +
Preference number: 4 (lower is better)
Translates to: SKADNTLDSLGFTIVSQTSLETP*MFLQRF
Trigger: GAATCTCTGAAGAAACATTCATGGTGTCTCAAGAGA...AGTTTGGCTGACAATAGTAAATCCCAATGAATCTAAGGTGTTATCAGCTTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635608.1
CDS-3UTR GCA 90 bp AGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATATTGTTGGAAGGCAATaGATTATTCCTGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: RNRAYVLCGLVYHDLTLNIVGRQ*IIPVLV
Trigger: AACCAGGACAGGAATAATGCATTGCCTTCCAACAAT...ATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp GTCTACTTTGAAGGACAATGTTCCCTTAGATGTATGCTTTCTGGCATATTAACACTGTTTACTCAAATCTaGAGAATTCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: VYFEGQCSLRCMLSGILTLFTQI*RIPSIR
Trigger: TCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAG...TGTTAATATGCCAGAAAGCATACATCTAAGGGAACATTGTCCTTCAAAGTAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp AAGAAGACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATAAAACACTGTTTACTCAAATCTaGAGAATTCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: KKTFQSCEDLIVLMPHKTLFTQI*RIPSIR
Trigger: TCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAG...TGTTTTATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGTCTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp AGTGTCTACTTTGAAGGACAATGTTCCCTTAGATGTATGCTTTCTGGCATATTACCCAAACATTTGAGCTaGCGACTAATTACACATGTT +
Preference number: 4 (lower is better)
Translates to: SVYFEGQCSLRCMLSGILPKHLS*RLITHV
Trigger: AACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGG...TAATATGCCAGAAAGCATACATCTAAGGGAACATTGTCCTTCAAAGTAGACACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp CAAACAGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCTGAAATACCATGACTaGATAGGGCTTCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: QTANTIQVNIGCSKSYTNLKYHD*IGLHFP
Trigger: TGGGAAATGAAGCCCTATGCAGTCATGGTATTTCAG...ATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380139.8
ENST00000613078.4
CDS-3UTR CCA 90 bp AGCAAAGCTGATAACACCTTAGATTCATTGGGATTTACTATTGTCAGCCAAACTGCATTATTCCTGTCCTaGTTTCTGTTCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SKADNTLDSLGFTIVSQTALFLS*FLFILL
Trigger: AAGCAGAATGAACAGAAACCAGGACAGGAATAATGC...AGTTTGGCTGACAATAGTAAATCCCAATGAATCTAAGGTGTTATCAGCTTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp AATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGAGCATTATTCCTGTCCTaGTTTCTGTTCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: NTSQYWVFKELHKSEAMGALFLS*FLFILL
Trigger: AAGCAGAATGAACAGAAACCAGGACAGGAATAATGC...TCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CCA 90 bp ATGCAAACAGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAGCATTATTCCTGTCCTaGTTTCTGTTCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: MQTANTIQVNIGCSKSYTALFLS*FLFILL
Trigger: AAGCAGAATGAACAGAAACCAGGACAGGAATAATGC...TGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCTGTTTGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp GTATTATCAATAATAATGGGGGATATGCCATTCCTCATTGCTTTTCTTGCTCTTTATTTTCAAGTGCCATaGCTGCATAGGGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: VLSIIMGDMPFLIAFLALYFQVP*LHRASF
Trigger: AAATGAAGCCCTATGCAGTCATGGCACTTGAAAATA...AAGAGCAAGAAAAGCAATGAGGAATGGCATATCCCCCATTATTATTGATAATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343281.9
ENST00000459716.6
ENST00000635178.1
CDS-3UTR TCA 90 bp CACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGTTGCTCAGAAACTTTTaGGTTCAGCTATTTACACTG +
Preference number: 4 (lower is better)
Translates to: HNTSQYWVFKELHKSEAMLLRNF*VQLFTL
Trigger: CAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAA...CATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR TCA 90 bp AGTGTCTACTTTGAAGGACAATGTTCCCTTAGATGTATGCTTTCTGGCATATTATTGCTCAGAAACTTTTaGGTTCAGCTATTTACACTG +
Preference number: 4 (lower is better)
Translates to: SVYFEGQCSLRCMLSGILLLRNF*VQLFTL
Trigger: CAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAA...TAATATGCCAGAAAGCATACATCTAAGGGAACATTGTCCTTCAAAGTAGACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp AGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGACATTCCAGAGTTGTaGGGACTTGATTGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: SEHNTSQYWVFKELHKSEDIPEL*GLDCLN
Trigger: ATTAAGACAATCAAGTCCTCACAACTCTGGAATGTC...TTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR TCA 90 bp CACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGTTTGAACCGCTCATGTaGAATCAAAGGATGGTAATT +
Preference number: 4 (lower is better)
Translates to: HNTSQYWVFKELHKSEAMFEPLM*NQRMVI
Trigger: AATTACCATCCTTTGATTTCACATGAGCGGTTCAAA...CATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp AAGAAGACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATAAAACAATAGTTATTTTCAAGTaGCATGACTGCATAGGGCTT +
Preference number: 4 (lower is better)
Translates to: KKTFQSCEDLIVLMPHKTIVIFK*HDCIGL
Trigger: AAGCCCTATGCAGTCATGGCACTTGAAAATAACTAT...TGTTTTATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGTCTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380130.7
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp TTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCATTGTTGGAAGGCAATaGATTATTCCTGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: FQILTLEKETVYSNLQNSIVGRQ*IIPVLV
Trigger: AACCAGGACAGGAATAATGCATTGCCTTCCAACAAT...GGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp TGGTTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATCTGTTTACTCAAATCTaGAGAATTCCCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: WFQILTLEKETVYSNLQNLFTQI*RIPSIR
Trigger: TCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAG...ATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAACCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR GCA 90 bp TTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCCCAAACATTTGAGCTaGCGACTAATTACACATGTT +
Preference number: 4 (lower is better)
Translates to: FQILTLEKETVYSNLQNSPKHLS*RLITHV
Trigger: AACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGG...GGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CCA 90 bp TTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCGCATTATTCCTGTCCTaGTTTCTGTTCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: FQILTLEKETVYSNLQNSALFLS*FLFILL
Trigger: AAGCAGAATGAACAGAAACCAGGACAGGAATAATGC...GGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR TCA 90 bp AGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAATTTGAACCGCTCATGTaGAATCAAAGGATGGTAATT +
Preference number: 4 (lower is better)
Translates to: SEHNTSQYWVFKELHKSEFEPLM*NQRMVI
Trigger: AATTACCATCCTTTGATTTCACATGAGCGGTTCAAA...TTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR TCA 90 bp CAAACAGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATTTTGAACCGCTCATGTaGAATCAAAGGATGGTAATT +
Preference number: 4 (lower is better)
Translates to: QTANTIQVNIGCSKSYTNFEPLM*NQRMVI
Trigger: AATTACCATCCTTTGATTTCACATGAGCGGTTCAAA...ATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCTGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR GCA 90 bp AGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAATAGTTATTTTCAAGTaGCATGACTGCATAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SEHNTSQYWVFKELHKSEIVIFK*HDCIGL
Trigger: AAGCCCTATGCAGTCATGGCACTTGAAAATAACTAT...TTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380130.7
ENST00000635608.1
CDS-3UTR CCA 90 bp AGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAATGTTTCTTCATTTCTaGCCTGAAAACTACCATGTC +
Preference number: 4 (lower is better)
Translates to: SEHNTSQYWVFKELHKSEMFLHF*PENYHV
Trigger: GACATGGTAGTTTTCAGGCCAGAAATGAAGAAACAT...TTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380139.8
ENST00000613078.4
CDS TCA 90 bp CCATGGGCAGGAGGGCTGGCTGCGAGAGCCCCGGGTTCCCTTTACTaGAGTCACGGTCTTGGCCAAAGCTGTTGTTTTTGTGACTCTCCG +
Preference number: 5 (lower is better)
Translates to: PWAGGLAARAPGSLY*SHGLGQSCCFCDSP
Trigger: CGGAGAGTCACAAAAACAACAGCTTTGGCCAAGACCGTGACTTCAGTAAAGGGAACCCGGGGCTCTCGCAGCCAGCCCTCCTGCCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459716.6
ENST00000613078.4
CDS TCA 90 bp TTCCCTTTACTGAAGTCACGGTCTTGGCCAAAGCTGTTGTTTTTGTaGCTCTCCGGCCATGTGATGGATAGAGGGGCGGGCGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: FPLLKSRSWPKLLFL*LSGHVMDRGAGAGS
Trigger: GCTCCCAGCGCCCGCCCCTCTATCCATCACATGGCCGGAGAGTCACAAAAACAACAGCTTTGGCCAAGACCGTGACTTCAGTAAAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS CCA 90 bp ATATTCTGTTGCCCTGGAACTCCCAGGGAGCAACAGCACACAGTGTaGAAATTCCCGGCTCACCAGAGGCAGAACCGTCCTGTTGTGACC +
Preference number: 5 (lower is better)
Translates to: IFCCPGTPREQQHTV*KFPAHQRQNRPVVT
Trigger: GGTCACAACAGGACGGTTCTGCCTCTGGTGAGCCGGGAATTTCCACACTGTGTGCTGTTGCTCCCTGGGAGTTCCAGGGCAACAGAATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472298.1
CDS-3UTR CAA 90 bp GTGACAACCGCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCGTCAAGCCATCCATATaGAGCTGGTTATGCCACCAC +
Preference number: 5 (lower is better)
Translates to: VTTAPSVIGALICKSTVGVKPSI*SWLCHH
Trigger: GTGGTGGCATAACCAGCTCAATATGGATGGCTTGAC...GCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGCGGTTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS TCA 90 bp CAGTGTGGAAATTCCCGGCTCACCAGAGGCAGAACCGTCCTGTTGTaGCCTGTAGCTCCACTACGAGCGCCATCTAATTCAGTATTAGTA +
Preference number: 5 (lower is better)
Translates to: QCGNSRLTRGRTVLL*PVAPLRAPSNSVLV
Trigger: TACTAATACTGAATTAGATGGCGCTCGTAGTGGAGCTACAGGTCACAACAGGACGGTTCTGCCTCTGGTGAGCCGGGAATTTCCACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472298.1
CDS-3UTR CAA 90 bp CTCCATAGTGGTCACTCACTTAACCCAAGTGAGCCAAAAACCCTAAAGCAGGGACGTGGGCCCTCCGGTTaGGAAACTCTGTGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: LHSGHSLNPSEPKTLKQGRGPSG*ETLCRN
Trigger: ATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACG...TCCCTGCTTTAGGGTTTTTGGCTCACTTGGGTTAAGTGAGTGACCACTATGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp CTACCAGCCCAGACGAGTCAAGCCATCCATATTGAGCTGGTTATGCCACCACCCTGCACTCCCAAACATTaGAGCTGCCGACTAATTACA +
Preference number: 5 (lower is better)
Translates to: LPAQTSQAIHIELVMPPPCTPKH*SCRLIT
Trigger: TGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA...GGGTGGTGGCATAACCAGCTCAATATGGATGGCTTGACTCGTCTGGGCTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR CAA 90 bp AGGGAGCCAGCCAAGTCAGGAGGGCTTGAATCTGGTCCTTTGAACCGCTCATGTACATTACACATGGTGTaGGTAGTCATGGAGATGTCG +
Preference number: 5 (lower is better)
Translates to: REPAKSGGLESGPLNRSCTLHMV*VVMEMS
Trigger: CGACATCTCCATGACTACCAACACCATGTGTAATGT...ACATGAGCGGTTCAAAGGACCAGATTCAAGCCCTCCTGACTTGGCTGGCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp CAGAACTGCCAATGCCCAGCGAAACGGGAGGACTCAAAGTCAACTGCCAAGCTAATGTGGAGCCATAAATaGACTCCAAGGTCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: QNCQCPAKREDSKSTAKLMWSHK*TPRSEL
Trigger: GAGCTCTGACCTTGGAGTCAATTTATGGCTCCACAT...TAGCTTGGCAGTTGACTTTGAGTCCTCCCGTTTCGCTGGGCATTGGCAGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS-3UTR CAA 90 bp GCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCCTCCGGTTACTGAAGTCACGGTCTaGGCCAAAGCTGTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: APSVIGALICKSTVGPPVTEVTV*AKAVVF
Trigger: AAAAACAACAGCTTTGGCCAAGACCGTGACTTCAGT...AACCGGAGGGCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459716.6
ENST00000613078.4
CDS-3UTR CAA 90 bp GCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGCGTGGGCCCTCCGGTTaGGAAACTCTGTGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: AVGQQEIEHTSSVVLSIMRGPSG*ETLCRN
Trigger: ATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACG...CATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp GAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCCGTGGGCCCTCCGGTTaGGAAACTCTGTGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: EAVGQQEIEHTSSVVLSIRGPSG*ETLCRN
Trigger: ATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACG...GATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp CCCCAGTTCTATCTTTATGGTGGTCAGGAGCCTCTGGCACATAAGGTCCACAAGAGTAGCAATGGCACTTaGATAAGTAGCAATGCCCCC +
Preference number: 5 (lower is better)
Translates to: PQFYLYGGQEPLAHKVHKSSNGT*ISSNAP
Trigger: GGGGGCATTGCTACTTATCAAAGTGCCATTGCTACT...CTTGTGGACCTTATGTGCCAGAGGCTCCTGACCACCATAAAGATAGAACTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343281.9
CDS-3UTR CAA 90 bp CACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTGGCATTGCACTCCCAAACATTaGAGCTGCCGACTAATTACA +
Preference number: 5 (lower is better)
Translates to: HRGPSGLETLCRNSSIWHCTPKH*SCRLIT
Trigger: TGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA...ATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp ACCGCCCCTTCTGTGATAGGAGCTCTCATTTGTAAATCCACCGTGGGCCCTCCGTTTAATGAGACCCTATaGCCCATAAAGAGCATTTGC +
Preference number: 5 (lower is better)
Translates to: TAPSVIGALICKSTVGPPFNETL*PIKSIC
Trigger: GCAAATGCTCTTTATGGGCAATAGGGTCTCATTAAA...CGGAGGGCCCACGGTGGATTTACAAATGAGAGCTCCTATCACAGAAGGGGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp AGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCGTGGGCCCTCCGGTTaGGAAACTCTGTGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: RSCWPTRNRAYVLCGLVYRGPSG*ETLCRN
Trigger: ATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACG...ATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp AGGCCTCTAATATCCATGGTGACAACCGCCCCTTCTGTGATAGGAGCTCTCATTAGTAGCAATGGCACTTaGATAAGTAGCAATGCCCCC +
Preference number: 5 (lower is better)
Translates to: RPLISMVTTAPSVIGALISSNGT*ISSNAP
Trigger: GGGGGCATTGCTACTTATCAAAGTGCCATTGCTACT...AATGAGAGCTCCTATCACAGAAGGGGCGGTTGTCACCATGGATATTAGAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp GAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCAGCATCAGACCATGCATCGTGGGCCCTCCGGTTaGGAAACTCTGTGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: EKETVYSNLQNSQHQTMHRGPSG*ETLCRN
Trigger: ATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACG...ATGCATGGTCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp CCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTGGCATTGTTGGAAGGAGTAGCAATGGCACTTaGATAAGTAGCAATGCCCCC +
Preference number: 5 (lower is better)
Translates to: PPVWKLCVGIPVSGIVGRSSNGT*ISSNAP
Trigger: GGGGGCATTGCTACTTATCAAAGTGCCATTGCTACT...CCTTCCAACAATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343281.9
ENST00000380139.8
ENST00000459716.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp CTATATCCTGGGGTGCCTAATTTCTTGCACTCCCAAACATTTGAGCTGCCGACTAGTAGCAATGGCACTTaGATAAGTAGCAATGCCCCC +
Preference number: 5 (lower is better)
Translates to: LYPGVPNFLHSQTFELPTSSNGT*ISSNAP
Trigger: GGGGGCATTGCTACTTATCAAAGTGCCATTGCTACT...AGTCGGCAGCTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCCAGGATATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp AGGGAGCCAGCCAAGTCAGGAGGGCTTGAATCTGGTCCTTTGAACCGCTCATGTCATTGGGATTTACTATaGTCAGCCAAACTTACTCAA +
Preference number: 5 (lower is better)
Translates to: REPAKSGGLESGPLNRSCHWDLL*SAKLTQ
Trigger: TTGAGTAAGTTTGGCTGACAATAGTAAATCCCAATG...ACATGAGCGGTTCAAAGGACCAGATTCAAGCCCTCCTGACTTGGCTGGCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp CACCGTGGGCCCTCCGGTTTGGAAACTCTGTGTAGGAATTCCAGTATCTGGCATAAGGCGGCTGCATCTTaGATCCCAATTTTTAAATTT +
Preference number: 5 (lower is better)
Translates to: HRGPSGLETLCRNSSIWHKAAAS*IPIFKF
Trigger: AAATTTAAAAATTGGGATCAAAGATGCAGCCGCCTT...ATGCCAGATACTGGAATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343281.9
CDS-3UTR CAA 90 bp AGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCAGCATCAGACCATGCATACGTGGGCCCTCCGGTTaGGAAACTCTGTGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: RKRLFTQICRIPSIRPCIRGPSG*ETLCRN
Trigger: ATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACG...TATGCATGGTCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp GAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCGGGGTGCCTAATTTCTaGCACTCCCAAACATTTGAG +
Preference number: 5 (lower is better)
Translates to: EAVGQQEIEHTSSVVLSIGVPNF*HSQTFE
Trigger: CTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCC...GATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp ATCCATATTGAGCTGGTTATGCCACCACCCTATCAACCAAGATACCCAGGACTAGGGGTGCCTAATTTCTaGCACTCCCAAACATTTGAG +
Preference number: 5 (lower is better)
Translates to: IHIELVMPPPYQPRYPGLGVPNF*HSQTFE
Trigger: CTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCC...TAGTCCTGGGTATCTTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR CAA 90 bp AAGTTATGTAACCCAGAGCCACTTCTCCATAGTGGTCACTCACTTAACCCAAGTGTCAAGCCATCCATATaGAGCTGGTTATGCCACCAC +
Preference number: 5 (lower is better)
Translates to: KLCNPEPLLHSGHSLNPSVKPSI*SWLCHH
Trigger: GTGGTGGCATAACCAGCTCAATATGGATGGCTTGAC...ACTTGGGTTAAGTGAGTGACCACTATGGAGAAGTGGCTCTGGGTTACATAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS TCA 90 bp GTAGCTCCACTACGAGCGCCATCTAATTCAGTATTAGTATTGATCTaGACATTTCGGTGGGTGCTTCTCTGTATGCCTTGCCGTAGGAAA +
Preference number: 5 (lower is better)
Translates to: VAPLRAPSNSVLVLI*TFRWVLLCMPCRRK
Trigger: TTTCCTACGGCAAGGCATACAGAGAAGCACCCACCGAAATGTTCAGATCAATACTAATACTGAATTAGATGGCGCTCGTAGTGGAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472298.1
CDS TCA 90 bp ATGGGGTCCATGAACTCGGATTTTAATAGCCACCTGAGGCAATTCTaGTGGAGTAGTCCACAGATCCACTTTGAAGACACTATCTGCCTT +
Preference number: 5 (lower is better)
Translates to: MGSMNSDFNSHLRQF*WSSPQIHFEDTICL
Trigger: AAGGCAGATAGTGTCTTCAAAGTGGATCTGTGGACTACTCCATCAGAATTGCCTCAGGTGGCTATTAAAATCCGAGTTCATGGACCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635608.1
CDS-3UTR CAA 90 bp CATTTTGTAATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGCGTGGGCCCTCCGGTTaGGAAACTCTGTGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: HFVMSMAFIYPCMTYILGRGPSG*ETLCRN
Trigger: ATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACG...CCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCATTACAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp CAGTATAAGAAGACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATCGTGGGCCCTCCGGTTaGGAAACTCTGTGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: QYKKTFQSCEDLIVLMPHRGPSG*ETLCRN
Trigger: ATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACG...ATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGTCTTCTTATACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp GTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCAGTAGCAATGGCACTTaGATAAGTAGCAATGCCCCC +
Preference number: 5 (lower is better)
Translates to: VGQQEIEHTSSVVLSIMISSNGT*ISSNAP
Trigger: GGGGGCATTGCTACTTATCAAAGTGCCATTGCTACT...GATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp AGGCCTCTAATATCCATGGTGACAACCGCCCCTTCTGTGATAGGAGCTCTCATTTTTAATGAGACCCTATaGCCCATAAAGAGCATTTGC +
Preference number: 5 (lower is better)
Translates to: RPLISMVTTAPSVIGALIFNETL*PIKSIC
Trigger: GCAAATGCTCTTTATGGGCAATAGGGTCTCATTAAA...AATGAGAGCTCCTATCACAGAAGGGGCGGTTGTCACCATGGATATTAGAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp GAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCAGCATCAGACCATGCATAGGAAAACTGTCACTTaGGGCTGTCTGTGCTGCTTA +
Preference number: 5 (lower is better)
Translates to: EKETVYSNLQNSQHQTMHRKTVT*GCLCCL
Trigger: TAAGCAGCACAGACAGCCCAAAGTGACAGTTTTCCT...ATGCATGGTCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343281.9
CDS-3UTR CAA 90 bp TGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTACACATGGTGTaGGTAGTCATGGAGATGTCG +
Preference number: 5 (lower is better)
Translates to: WPTRNRAYVLCGLVYHDLTLHMV*VVMEMS
Trigger: CGACATCTCCATGACTACCAACACCATGTGTAATGT...GAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp AGGCCTCTAATATCCATGGTGACAACCGCCCCTTCTGTGATAGGAGCTCTCATTCATTGGGATTTACTATaGTCAGCCAAACTTACTCAA +
Preference number: 5 (lower is better)
Translates to: RPLISMVTTAPSVIGALIHWDLL*SAKLTQ
Trigger: TTGAGTAAGTTTGGCTGACAATAGTAAATCCCAATG...AATGAGAGCTCCTATCACAGAAGGGGCGGTTGTCACCATGGATATTAGAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp AGACGAGTCAAGCCATCCATATTGAGCTGGTTATGCCACCACCCTATCAACCAAATGGTAATTTCCACTTaGAGCTCTCTGACATTTCTC +
Preference number: 5 (lower is better)
Translates to: RRVKPSILSWLCHHPINQMVIST*SSLTFL
Trigger: GAGAAATGTCAGAGAGCTCAAAGTGGAAATTACCAT...TTGGTTGATAGGGTGGTGGCATAACCAGCTCAATATGGATGGCTTGACTCGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp ACACATGGTGTTGGTAGTCATGGAGATGTCGAGCAGGTTTCAGTAGTGTCAGATCAGAAGCCATGGGAGTaGAAAAACAGATCACTTCTA +
Preference number: 5 (lower is better)
Translates to: THGVGSHGDVEQVSVVSDQKPWE*KNRSLL
Trigger: TAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCTG...ATCTGACACTACTGAAACCTGCTCGACATCTCCATGACTACCAACACCATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp CTCCATAGTGGTCACTCACTTAACCCAAGTGAGCCAAAAACCCTAAAGCAGGGATTTAATGAGACCCTATaGCCCATAAAGAGCATTTGC +
Preference number: 5 (lower is better)
Translates to: LHSGHSLNPSEPKTLKQGFNETL*PIKSIC
Trigger: GCAAATGCTCTTTATGGGCAATAGGGTCTCATTAAA...TCCCTGCTTTAGGGTTTTTGGCTCACTTGGGTTAAGTGAGTGACCACTATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS TCA 90 bp AGTCCACAGATCCACTTTGAAGACACTATCTGCCTTGCTAACTCTTaGACGTTGAATTTCCAGCGAGTGTCAGGTTCTCGGAATATAACT +
Preference number: 5 (lower is better)
Translates to: SPQIHFEDTICLANS*TLNFQRVSGSRNIT
Trigger: AGTTATATTCCGAGAACCTGACACTCGCTGGAAATTCAACGTTCAAGAGTTAGCAAGGCAGATAGTGTCTTCAAAGTGGATCTGTGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635608.1
CDS-3UTR CAA 90 bp AGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAACGTGGGCCCTCCGGTTaGGAAACTCTGTGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: SEHNTSQYWVFKELHKSERGPSG*ETLCRN
Trigger: ATTCCTACACAGAGTTTCCAAACCGGAGGGCCCACG...TTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp GAAAAGTTATGTAACCCAGAGCCACTTCTCCATAGTGGTCACTCACTTAACCCACCCAAAGTGTCTACTTaGAAGGACAATGTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: EKLCNPEPLLHSGHSLNPPKVST*KDNVPL
Trigger: TAAGGGAACATTGTCCTTCAAAGTAGACACTTTGGG...TGGGTTAAGTGAGTGACCACTATGGAGAAGTGGCTCTGGGTTACATAACTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR CAA 90 bp TTCATAGTTATTTTCAAGTGCCATGACTGCATAGGGCTTCATTTCCCAGGCGTGCCCAAAGTGTCTACTTaGAAGGACAATGTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: FIVIFKCHDCIGLHFPGVPKVST*KDNVPL
Trigger: TAAGGGAACATTGTCCTTCAAAGTAGACACTTTGGG...CACGCCTGGGAAATGAAGCCCTATGCAGTCATGGCACTTGAAAATAACTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459716.6
ENST00000635178.1
CDS-3UTR CAA 90 bp AAGCCATGGGAGTTGAAAAACAGATCACTTCTACAGGGGATAAAGTTGATGGCATGCACTCCCAAACATTaGAGCTGCCGACTAATTACA +
Preference number: 5 (lower is better)
Translates to: KPWELKNRSLLQGIKLMACTPKH*SCRLIT
Trigger: TGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA...TGCCATCAACTTTATCCCCTGTAGAAGTGATCTGTTTTTCAACTCCCATGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR CAA 90 bp GACTTTGCTCAGAAACTTTTGAGTTCAGCTATTTACACTGGAATTGGAGCTCTGGGGGTGCCTAATTTCTaGCACTCCCAAACATTTGAG +
Preference number: 5 (lower is better)
Translates to: DFAQKLLSSAIYTGIGALGVPNF*HSQTFE
Trigger: CTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCC...CAGAGCTCCAATTCCAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp GTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATCTGATTCCAACCTGTGGGGTGCCTAATTTCTaGCACTCCCAAACATTTGAG +
Preference number: 5 (lower is better)
Translates to: VLCGLVYHDLTLNLIPTCGVPNF*HSQTFE
Trigger: CTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCC...ACAGGTTGGAATCAGATTTAATGTGAGATCATGATAGACAAGACCACAGAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp GGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACAGAGTTGTGAGGACTaGATTGTCTTAATGCCACAT +
Preference number: 5 (lower is better)
Translates to: GQQEIEHTSSVVLSIMISQSCED*IVLMPH
Trigger: ATGTGGCATTAAGACAATCAAGTCCTCACAACTCTG...TGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp GAAAACATTACACATGGTGTTGGTAGTCATGGAGATGTCGAGCAGGTTTCAGTACTTGAATCTGGTCCTTaGAACCGCTCATGTGAAATC +
Preference number: 5 (lower is better)
Translates to: ENITHGVGSHGDVEQVSVLESGP*NRSCEI
Trigger: GATTTCACATGAGCGGTTCAAAGGACCAGATTCAAG...TACTGAAACCTGCTCGACATCTCCATGACTACCAACACCATGTGTAATGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp AGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATCAGAAGCCATGGGAGTaGAAAAACAGATCACTTCTA +
Preference number: 5 (lower is better)
Translates to: SCWPTRNRAYVLCGLVYHQKPWE*KNRSLL
Trigger: TAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCTG...ATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp GGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACAGAAGCCATGGGAGTaGAAAAACAGATCACTTCTA +
Preference number: 5 (lower is better)
Translates to: GQQEIEHTSSVVLSIMISQKPWE*KNRSLL
Trigger: TAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCTG...TGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp TTATGTAACCCAGAGCCACTTCTCCATAGTGGTCACTCACTTAACCCAAGTGAGTTTAATGAGACCCTATaGCCCATAAAGAGCATTTGC +
Preference number: 5 (lower is better)
Translates to: LCNPEPLLHSGHSLNPSEFNETL*PIKSIC
Trigger: GCAAATGCTCTTTATGGGCAATAGGGTCTCATTAAA...CTCACTTGGGTTAAGTGAGTGACCACTATGGAGAAGTGGCTCTGGGTTACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp ATTCAGCAATCATTTAATGAGACCCTATTGCCCATAAAGAGCATTTGCCAGTTCAGTAGCAATGGCACTTaGATAAGTAGCAATGCCCCC +
Preference number: 5 (lower is better)
Translates to: IQQSFNETLLPIKSICQFSSNGT*ISSNAP
Trigger: GGGGGCATTGCTACTTATCAAAGTGCCATTGCTACT...GAACTGGCAAATGCTCTTTATGGGCAATAGGGTCTCATTAAATGATTGCTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380130.7
ENST00000380139.8
CDS-3UTR CAA 90 bp TTTGTAATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCTGCACTCCCAAACATTaGAGCTGCCGACTAATTACA +
Preference number: 5 (lower is better)
Translates to: FVMSMAFIYPCMTYILGCCTPKH*SCRLIT
Trigger: TGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA...GCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCATTACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp GTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATCTGATTCCAACCTGTTGCACTCCCAAACATTaGAGCTGCCGACTAATTACA +
Preference number: 5 (lower is better)
Translates to: VLCGLVYHDLTLNLIPTCCTPKH*SCRLIT
Trigger: TGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA...ACAGGTTGGAATCAGATTTAATGTGAGATCATGATAGACAAGACCACAGAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp TGCACTCCCAAACATTTGAGCTGCCGACTAATTACACATGTTAATAGGCATAATGGGGTGCCTAATTTCTaGCACTCCCAAACATTTGAG +
Preference number: 5 (lower is better)
Translates to: CTPKHLSCRLITHVNRHNGVPNF*HSQTFE
Trigger: CTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCC...ATTATGCCTATTAACATGTGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp GTGCTTGGAGATACAGAAGTTAGCAAAGCTGATAACACCTTAGATTCATTGGGAACATTACACATGGTGTaGGTAGTCATGGAGATGTCG +
Preference number: 5 (lower is better)
Translates to: VLGDTEVSKADNTLDSLGTLHMV*VVMEMS
Trigger: CGACATCTCCATGACTACCAACACCATGTGTAATGT...TCCCAATGAATCTAAGGTGTTATCAGCTTTGCTAACTTCTGTATCTCCAAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp GCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGAACACCTTAGATTCATaGGGATTTACTATTGTCAGC +
Preference number: 5 (lower is better)
Translates to: AVGQQEIEHTSSVVLSIMNTLDS*GFTIVS
Trigger: GCTGACAATAGTAAATCCCAATGAATCTAAGGTGTT...CATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp ATGCAAACAGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAGTCAAGCCATCCATATaGAGCTGGTTATGCCACCAC +
Preference number: 5 (lower is better)
Translates to: MQTANTIQVNIGCSKSYTVKPSI*SWLCHH
Trigger: GTGGTGGCATAACCAGCTCAATATGGATGGCTTGAC...TGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCTGTTTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp CAATCATTTAATGAGACCCTATTGCCCATAAAGAGCATTTGCCAGTTCTATGAAGTCAAGCCATCCATATaGAGCTGGTTATGCCACCAC +
Preference number: 5 (lower is better)
Translates to: QSFNETLLPIKSICQFYEVKPSI*SWLCHH
Trigger: GTGGTGGCATAACCAGCTCAATATGGATGGCTTGAC...TTCATAGAACTGGCAAATGCTCTTTATGGGCAATAGGGTCTCATTAAATGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp GTGCTTGGAGATACAGAAGTTAGCAAAGCTGATAACACCTTAGATTCATTGGGACTTGAATCTGGTCCTTaGAACCGCTCATGTGAAATC +
Preference number: 5 (lower is better)
Translates to: VLGDTEVSKADNTLDSLGLESGP*NRSCEI
Trigger: GATTTCACATGAGCGGTTCAAAGGACCAGATTCAAG...TCCCAATGAATCTAAGGTGTTATCAGCTTTGCTAACTTCTGTATCTCCAAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp GACTTTGCTCAGAAACTTTTGAGTTCAGCTATTTACACTGGAATTGGAGCTCTGCTTGAATCTGGTCCTTaGAACCGCTCATGTGAAATC +
Preference number: 5 (lower is better)
Translates to: DFAQKLLSSAIYTGIGALLESGP*NRSCEI
Trigger: GATTTCACATGAGCGGTTCAAAGGACCAGATTCAAG...CAGAGCTCCAATTCCAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR CAA 90 bp AGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATTTTTCTTGCTCTTTTTaGGTTCCATTCATGAGCTTC +
Preference number: 5 (lower is better)
Translates to: RSCWPTRNRAYVLCGLVYFSCSF*VPFMSF
Trigger: GAAGCTCATGAATGGAACCAAAAAAGAGCAAGAAAA...ATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000495479.5
ENST00000530622.6
ENST00000613078.4
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp AGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATAGTAGCAATGGCACTTaGATAAGTAGCAATGCCCCC +
Preference number: 5 (lower is better)
Translates to: RNRAYVLCGLVYHDLTLNSSNGT*ISSNAP
Trigger: GGGGGCATTGCTACTTATCAAAGTGCCATTGCTACT...ATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp CACAAATCAGAAGCCATGGGAGTTGAAAAACAGATCACTTCTACAGGGGATAAACCCAAAGTGTCTACTTaGAAGGACAATGTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: HKSEAMGVEKQITSTGDKPKVST*KDNVPL
Trigger: TAAGGGAACATTGTCCTTCAAAGTAGACACTTTGGG...TTTATCCCCTGTAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCTGATTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR CAA 90 bp CAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGAGTTGAAAAAGGGGTGCCTAATTTCTaGCACTCCCAAACATTTGAG +
Preference number: 5 (lower is better)
Translates to: QYWVFKELHKSEAMGVEKGVPNF*HSQTFE
Trigger: CTCAAATGTTTGGGAGTGCAAGAAATTAGGCACCCC...TTTTTCAACTCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR CAA 90 bp GAAAAGTTATGTAACCCAGAGCCACTTCTCCATAGTGGTCACTCACTTAACCCACATTGGGATTTACTATaGTCAGCCAAACTTACTCAA +
Preference number: 5 (lower is better)
Translates to: EKLCNPEPLLHSGHSLNPHWDLL*SAKLTQ
Trigger: TTGAGTAAGTTTGGCTGACAATAGTAAATCCCAATG...TGGGTTAAGTGAGTGACCACTATGGAGAAGTGGCTCTGGGTTACATAACTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp AAGCCATGGGAGTTGAAAAACAGATCACTTCTACAGGGGATAAAGTTGATGGCAATGGTAATTTCCACTTaGAGCTCTCTGACATTTCTC +
Preference number: 5 (lower is better)
Translates to: KPWELKNRSLLQGIKLMAMVIST*SSLTFL
Trigger: GAGAAATGTCAGAGAGCTCAAAGTGGAAATTACCAT...TGCCATCAACTTTATCCCCTGTAGAAGTGATCTGTTTTTCAACTCCCATGGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp CATTTTGTAATGAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGAAAGTCATGCTGCAATaGTCTCTGGCACATAAGGTC +
Preference number: 5 (lower is better)
Translates to: HFVMSMAFIYPCMTYILGKVMLQ*SLAHKV
Trigger: GACCTTATGTGCCAGAGACAATTGCAGCATGACTTT...CCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTCATTACAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635178.1
CDS-3UTR CAA 90 bp GAGAAAGAGACTGTTTACTCAAATCTGCAGAATTCCCAGCATCAGACCATGCATTTTTCTTGCTCTTTTTaGGTTCCATTCATGAGCTTC +
Preference number: 5 (lower is better)
Translates to: EKETVYSNLQNSQHQTMHFSCSF*VPFMSF
Trigger: GAAGCTCATGAATGGAACCAAAAAAGAGCAAGAAAA...ATGCATGGTCTGATGCTGGGAATTCTGCAGATTTGAGTAAACAGTCTCTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp TTTGCTCAGAAACTTTTGAGTTCAGCTATTTACACTGGAATTGGAGCTCTGACTCCCAAAGTGTCTACTTaGAAGGACAATGTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: FAQKLLSSAIYTGIGALTPKVST*KDNVPL
Trigger: TAAGGGAACATTGTCCTTCAAAGTAGACACTTTGGG...AGTCAGAGCTCCAATTCCAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp TTTGCTCAGAAACTTTTGAGTTCAGCTATTTACACTGGAATTGGAGCTCTGACTCAGAGTTGTGAGGACTaGATTGTCTTAATGCCACAT +
Preference number: 5 (lower is better)
Translates to: FAQKLLSSAIYTGIGALTQSCED*IVLMPH
Trigger: ATGTGGCATTAAGACAATCAAGTCCTCACAACTCTG...AGTCAGAGCTCCAATTCCAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp ACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTACAGAGTTGTGAGGACTaGATTGTCTTAATGCCACAT +
Preference number: 5 (lower is better)
Translates to: TRNRAYVLCGLVYHDLTLQSCED*IVLMPH
Trigger: ATGTGGCATTAAGACAATCAAGTCCTCACAACTCTG...TAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp AGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATACATTACACATGGTGTaGGTAGTCATGGAGATGTCG +
Preference number: 5 (lower is better)
Translates to: RNRAYVLCGLVYHDLTLNTLHMV*VVMEMS
Trigger: CGACATCTCCATGACTACCAACACCATGTGTAATGT...ATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp GAGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTTCAACACCTTAGATTCATaGGGATTTACTATTGTCAGC +
Preference number: 5 (lower is better)
Translates to: EHGFYISLYDLYPGVPNFNTLDS*GFTIVS
Trigger: GCTGACAATAGTAAATCCCAATGAATCTAAGGTGTT...GAAATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR CAA 90 bp TTAGAAAGAAGCTGTTGGCCAACAAGAAATAGAGCATACGTCCTCTGTGGTCTTGGAGATTATTTTATGTaGTGCTTGGAGATACAGAAG +
Preference number: 5 (lower is better)
Translates to: LERSCWPTRNRAYVLCGLGDYFM*CLEIQK
Trigger: CTTCTGTATCTCCAAGCACAACATAAAATAATCTCC...AAGACCACAGAGGACGTATGCTCTATTTCTTGTTGGCCAACAGCTTCTTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp GAAAACATTACACATGGTGTTGGTAGTCATGGAGATGTCGAGCAGGTTTCAGTACCTGAAAAGATTCTTTaGTTCGGTCTGAAATACCAT +
Preference number: 5 (lower is better)
Translates to: ENITHGVGSHGDVEQVSVPEKIL*FGLKYH
Trigger: ATGGTATTTCAGACCGAACAAAAGAATCTTTTCAGG...TACTGAAACCTGCTCGACATCTCCATGACTACCAACACCATGTGTAATGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380139.8
ENST00000613078.4
CDS-3UTR CAA 90 bp AGAAATAGAGCATACGTCCTCTGTGGTCTTGTCTATCATGATCTCACATTAAATCCCAAAGTGTCTACTTaGAAGGACAATGTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: RNRAYVLCGLVYHDLTLNPKVST*KDNVPL
Trigger: TAAGGGAACATTGTCCTTCAAAGTAGACACTTTGGG...ATTTAATGTGAGATCATGATAGACAAGACCACAGAGGACGTATGCTCTATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp GTATTATCAATAATAATGGGGGATATGCCATTCCTCATTGCTTTTCTTGCTCTTTGCACTCCCAAACATTaGAGCTGCCGACTAATTACA +
Preference number: 5 (lower is better)
Translates to: VLSIIMGDMPFLIAFLALCTPKH*SCRLIT
Trigger: TGTAATTAGTCGGCAGCTCAAATGTTTGGGAGTGCA...AAGAGCAAGAAAAGCAATGAGGAATGGCATATCCCCCATTATTATTGATAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459716.6
ENST00000635178.1
CDS-3UTR CAA 90 bp GTCTACTTTGAAGGACAATGTTCCCTTAGATGTATGCTTTCTGGCATATTAACACAGAGTTGTGAGGACTaGATTGTCTTAATGCCACAT +
Preference number: 5 (lower is better)
Translates to: VYFEGQCSLRCMLSGILTQSCED*IVLMPH
Trigger: ATGTGGCATTAAGACAATCAAGTCCTCACAACTCTG...TGTTAATATGCCAGAAAGCATACATCTAAGGGAACATTGTCCTTCAAAGTAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp GCATTTGCCAGTTCTATGAATGATGCAAACAGCGAACACAATACAAGTCAATATCAGAGTTGTGAGGACTaGATTGTCTTAATGCCACAT +
Preference number: 5 (lower is better)
Translates to: AFASSMNDANSEHNTSQYQSCED*IVLMPH
Trigger: ATGTGGCATTAAGACAATCAAGTCCTCACAACTCTG...ATATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCAAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR CAA 90 bp CACAAATCAGAAGCCATGGGAGTTGAAAAACAGATCACTTCTACAGGGGATAAACATTGGGATTTACTATaGTCAGCCAAACTTACTCAA +
Preference number: 5 (lower is better)
Translates to: HKSEAMGVEKQITSTGDKHWDLL*SAKLTQ
Trigger: TTGAGTAAGTTTGGCTGACAATAGTAAATCCCAATG...TTTATCCCCTGTAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCTGATTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp AGCATGGCTTTTATATATCCCTGTATGACCTATATCCTGGGGTGCCTAATTTCTGGAGATTATTTTATGTaGTGCTTGGAGATACAGAAG +
Preference number: 5 (lower is better)
Translates to: SMAFIYPCMTYILGCLISGDYFM*CLEIQK
Trigger: CTTCTGTATCTCCAAGCACAACATAAAATAATCTCC...AGAAATTAGGCACCCCAGGATATAGGTCATACAGGGATATATAAAAGCCATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR CAA 90 bp CAGTATAAGAAGACATTCCAGAGTTGTGAGGACTTGATTGTCTTAATGCCACATATGGTAATTTCCACTTaGAGCTCTCTGACATTTCTC +
Preference number: 5 (lower is better)
Translates to: QYKKTFQSCEDLIVLMPHMVIST*SSLTFL
Trigger: GAGAAATGTCAGAGAGCTCAAAGTGGAAATTACCAT...ATGTGGCATTAAGACAATCAAGTCCTCACAACTCTGGAATGTCTTCTTATACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR CAA 90 bp GTCTACTTTGAAGGACAATGTTCCCTTAGATGTATGCTTTCTGGCATATTAACACAGAAGCCATGGGAGTaGAAAAACAGATCACTTCTA +
Preference number: 5 (lower is better)
Translates to: VYFEGQCSLRCMLSGILTQKPWE*KNRSLL
Trigger: TAGAAGTGATCTGTTTTTCAACTCCCATGGCTTCTG...TGTTAATATGCCAGAAAGCATACATCTAAGGGAACATTGTCCTTCAAAGTAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000635608.1
CDS-3UTR CAA 90 bp TGGTTTCAAATTCTTACCCTAGAGAAAGAGACTGTTTACTCAAATCTGCAGAATACTGAAGTCACGGTCTaGGCCAAAGCTGTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: WFQILTLEKETVYSNLQNTEVTV*AKAVVF
Trigger: AAAAACAACAGCTTTGGCCAAGACCGTGACTTCAGT...ATTCTGCAGATTTGAGTAAACAGTCTCTTTCTCTAGGGTAAGAATTTGAAACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS-3UTR CAA 90 bp TTTGCTCAGAAACTTTTGAGTTCAGCTATTTACACTGGAATTGGAGCTCTGACTTTTTCTTGCTCTTTTTaGGTTCCATTCATGAGCTTC +
Preference number: 5 (lower is better)
Translates to: FAQKLLSSAIYTGIGALTFSCSF*VPFMSF
Trigger: GAAGCTCATGAATGGAACCAAAAAAGAGCAAGAAAA...AGTCAGAGCTCCAATTCCAGTGTAAATAGCTGAACTCAAAAGTTTCTGAGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380139.8
ENST00000459716.6
ENST00000530622.6
ENST00000635178.1
ENST00000635608.1
CDS-3UTR CAA 90 bp GCATTTGCCAGTTCTATGAATGATGCAAACAGCGAACACAATACAAGTCAATATAACACCTTAGATTCATaGGGATTTACTATTGTCAGC +
Preference number: 5 (lower is better)
Translates to: AFASSMNDANSEHNTSQYNTLDS*GFTIVS
Trigger: GCTGACAATAGTAAATCCCAATGAATCTAAGGTGTT...ATATTGACTTGTATTGTGTTCGCTGTTTGCATCATTCATAGAACTGGCAAATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp AATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCAGAAGCCATGGGAGGAGATTATTTTATGTaGTGCTTGGAGATACAGAAG +
Preference number: 5 (lower is better)
Translates to: NTSQYWVFKELHKSEAMGGDYFM*CLEIQK
Trigger: CTTCTGTATCTCCAAGCACAACATAAAATAATCTCC...TCCCATGGCTTCTGATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380130.7
ENST00000380139.8
ENST00000613078.4
ENST00000635608.1
CDS-3UTR CAA 90 bp CAAACAGCGAACACAATACAAGTCAATATTGGGTGTTCAAAGAGTTACACAAATCCTGAAAAGATTCTTTaGTTCGGTCTGAAATACCAT +
Preference number: 5 (lower is better)
Translates to: QTANTIQVNIGCSKSYTNPEKIL*FGLKYH
Trigger: ATGGTATTTCAGACCGAACAAAAGAATCTTTTCAGG...ATTTGTGTAACTCTTTGAACACCCAATATTGACTTGTATTGTGTTCGCTGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380139.8
ENST00000613078.4
CDS GCA 72 bp AGCCCAGCCCCTCCTTTCCACCCGCCGGAACCGTGCTaGGTGGGAGGGGGCGTCCCTACCTGGAAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: SPAPPFHPPEPC*VGGGVPTWKAG
Trigger: CCCAGCTTTCCAGGTAGGGACGCCCCCTCCCACGCAGCACGGTTCCGGCGGGTGGAAAGGAGGGGCTGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS GCA 72 bp GGGAGCCCAGCCCCTCCTTTCCACCCGCCGGAACCGTaGTGCGTGGGAGGGGGCGTCCCTACCTGGAAAGCT +
Preference number: 6 (lower is better)
Translates to: GSPAPPFHPPEP*CVGGGVPTWKA
Trigger: AGCTTTCCAGGTAGGGACGCCCCCTCCCACGCAGCACGGTTCCGGCGGGTGGAAAGGAGGGGCTGGGCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS CCA 72 bp CCGGAACCGTGCTGCGTGGGAGGGGGCGTCCCTACCTaGAAAGCTGGGGACGCTGGGAGACTCACAGCCCGG +
Preference number: 6 (lower is better)
Translates to: PEPCCVGGGVPT*KAGDAGRLTAR
Trigger: CCGGGCTGTGAGTCTCCCAGCGTCCCCAGCTTTCCAGGTAGGGACGCCCCCTCCCACGCAGCACGGTTCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS CCA 72 bp GTGCTGCGTGGGAGGGGGCGTCCCTACCTGGAAAGCTaGGGACGCTGGGAGACTCACAGCCCGGAAAACAAG +
Preference number: 6 (lower is better)
Translates to: VLRGRGRPYLES*GRWETHSPENK
Trigger: CTTGTTTTCCGGGCTGTGAGTCTCCCAGCGTCCCCAGCTTTCCAGGTAGGGACGCCCCCTCCCACGCAGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS CCA 72 bp TGCCCTGGAACTCCCAGGGAGCAACAGCACACAGTGTaGAAATTCCCGGCTCACCAGAGGCAGAACCGTCCT +
Preference number: 6 (lower is better)
Translates to: CPGTPREQQHTV*KFPAHQRQNRP
Trigger: AGGACGGTTCTGCCTCTGGTGAGCCGGGAATTTCCACACTGTGTGCTGTTGCTCCCTGGGAGTTCCAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472298.1
CDS CCA 72 bp AGATTGAAGGAAACTGTCCTCCATGGGCAGGAGGGCTaGCTGCGAGAGCCCCGGGTTCCCTTTACTGAAGTC +
Preference number: 6 (lower is better)
Translates to: RLKETVLHGQEG*LREPRVPFTEV
Trigger: GACTTCAGTAAAGGGAACCCGGGGCTCTCGCAGCCAGCCCTCCTGCCCATGGAGGACAGTTTCCTTCAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343281.9
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000459716.6
ENST00000613078.4
ENST00000635178.1
CDS CAA 90 bp GGCTGGCTGCGAGAGCCCCGGGTTCCCTTTACTGAAGTCACGGTCTaGGCCAAAGCTGTTGTTTTTGTGACTCTCCGGCCATGTGATGGA +
Preference number: 6 (lower is better)
Translates to: GWLREPRVPFTEVTV*AKAVVFVTLRPCDG
Trigger: TCCATCACATGGCCGGAGAGTCACAAAAACAACAGCTTTGGCCAAGACCGTGACTTCAGTAAAGGGAACCCGGGGCTCTCGCAGCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS TCA 72 bp GGAGGGCTGGCTGCGAGAGCCCCGGGTTCCCTTTACTaGAGTCACGGTCTTGGCCAAAGCTGTTGTTTTTGT +
Preference number: 6 (lower is better)
Translates to: GGLAARAPGSLY*SHGLGQSCCFC
Trigger: ACAAAAACAACAGCTTTGGCCAAGACCGTGACTTCAGTAAAGGGAACCCGGGGCTCTCGCAGCCAGCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459716.6
ENST00000613078.4
CDS TCA 72 bp CTGAAGTCACGGTCTTGGCCAAAGCTGTTGTTTTTGTaGCTCTCCGGCCATGTGATGGATAGAGGGGCGGGC +
Preference number: 6 (lower is better)
Translates to: LKSRSWPKLLFL*LSGHVMDRGAG
Trigger: GCCCGCCCCTCTATCCATCACATGGCCGGAGAGTCACAAAAACAACAGCTTTGGCCAAGACCGTGACTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459716.6
CDS GCA 72 bp AGGTCTGAAGGCACAATCTTCAGACTCCCAGGCCAGTaGTCACTCCAGTCGTCCCTGGCCAGTGTAGTTTTC +
Preference number: 6 (lower is better)
Translates to: RSEGTIFRLPGQ*SLQSSLASVVF
Trigger: GAAAACTACACTGGCCAGGGACGACTGGAGTGAGCACTGGCCTGGGAGTCTGAAGATTGTGCCTTCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464470.1
CDS TCA 72 bp AATTCCCGGCTCACCAGAGGCAGAACCGTCCTGTTGTaGCCTGTAGCTCCACTACGAGCGCCATCTAATTCA +
Preference number: 6 (lower is better)
Translates to: NSRLTRGRTVLL*PVAPLRAPSNS
Trigger: TGAATTAGATGGCGCTCGTAGTGGAGCTACAGGTCACAACAGGACGGTTCTGCCTCTGGTGAGCCGGGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472298.1
CDS GCA 72 bp TCATCCGTGCTGAAAATCAGGGCCCTGGGAAAGTCATaGTGCAATTGTCTGGCCAGTGTAGTTTTCCCGGAG +
Preference number: 6 (lower is better)
Translates to: SSVLKIRALGKS*CNCLASVVFPE
Trigger: CTCCGGGAAAACTACACTGGCCAGACAATTGCAGCATGACTTTCCCAGGGCCCTGATTTTCAGCACGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000380130.7
ENST00000380133.6
ENST00000380139.8
ENST00000472298.1
ENST00000495479.5
ENST00000613078.4
ENST00000635608.1
CDS CAA 72 bp GCTGAAAATCAGGGCCCTGGGAAAGTCATGCTGCAATaGTCTCTGGCACATAAGGTCCACAAGGGCAGGATC +
Preference number: 6 (lower is better)
Translates to: AENQGPGKVMLQ*SLAHKVHKGRI
Trigger: GATCCTGCCCTTGTGGACCTTATGTGCCAGAGACAATTGCAGCATGACTTTCCCAGGGCCCTGATTTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635178.1
CDS GCA 72 bp TCATCCGTGCTGAAAATCAGGGCCCTGGGAAAGTCATaGTGCAATTGTCTCTGGCACATAAGGTCCACAAGG +
Preference number: 6 (lower is better)
Translates to: SSVLKIRALGKS*CNCLWHIRSTR
Trigger: CCTTGTGGACCTTATGTGCCAGAGACAATTGCAGCATGACTTTCCCAGGGCCCTGATTTTCAGCACGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635178.1
CDS CAA 90 bp ATCATCCGTGCTGAAAATCAGGGCCCTGGGAAAGTCATGCTGCAATaGTCTCTGGCACATAAGGTCCACAAGGGCAGGATCTTTGTTTTG +
Preference number: 6 (lower is better)
Translates to: IIRAENQGPGKVMLQ*SLAHKVHKGRIFVL
Trigger: CAAAACAAAGATCCTGCCCTTGTGGACCTTATGTGCCAGAGACAATTGCAGCATGACTTTCCCAGGGCCCTGATTTTCAGCACGGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635178.1
CDS CAA 90 bp ATCAGGGTTTCCCAGGAGTTTGGGAAGGAATTTGTCACCTCTTTTTaGGTTCCATTCATGAGCTTCCTCCAGGAAGTCAGGATTGAACTC +
Preference number: 6 (lower is better)
Translates to: IRVSQEFGKEFVTSF*VPFMSFLQEVRIEL
Trigger: GAGTTCAATCCTGACTTCCTGGAGGAAGCTCATGAATGGAACCAAAAAAGAGGTGACAAATTCCTTCCCAAACTCCTGGGAAACCCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472298.1
CDS TCA 72 bp ATCCACTTTGAAGACACTATCTGCCTTGCTAACTCTTaGACGTTGAATTTCCAGCGAGTGTCAGGTTCTCGG +
Preference number: 6 (lower is better)
Translates to: IHFEDTICLANS*TLNFQRVSGSR
Trigger: CCGAGAACCTGACACTCGCTGGAAATTCAACGTTCAAGAGTTAGCAAGGCAGATAGTGTCTTCAAAGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635608.1
CDS GCA 72 bp GAAAAGATTCTTTTGTTCGGTCTGAAATACCATGACTaGATAGGGCTTCATTTCCCAGGCGTGGAGGTTGGT +
Preference number: 6 (lower is better)
Translates to: EKILLFGLKYHD*IGLHFPGVEVG
Trigger: ACCAACCTCCACGCCTGGGAAATGAAGCCCTATGCAGTCATGGTATTTCAGACCGAACAAAAGAATCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380139.8
ENST00000613078.4
CDS TCA 72 bp CTACGAGCGCCATCTAATTCAGTATTAGTATTGATCTaGACATTTCGGTGGGTGCTTCTCTGTATGCCTTGC +
Preference number: 6 (lower is better)
Translates to: LRAPSNSVLVLI*TFRWVLLCMPC
Trigger: GCAAGGCATACAGAGAAGCACCCACCGAAATGTTCAGATCAATACTAATACTGAATTAGATGGCGCTCGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472298.1
CDS CAA 90 bp TGGCCTGAAAACTACCATGTCCATTTCCAGCCTGAAAAGATTCTTTaGTTCGGTCTGAAATACCATGACTGCATAGGGCTTCATTTCCCA +
Preference number: 6 (lower is better)
Translates to: WPENYHVHFQPEKIL*FGLKYHDCIGLHFP
Trigger: TGGGAAATGAAGCCCTATGCAGTCATGGTATTTCAGACCGAACAAAAGAATCTTTTCAGGCTGGAAATGGACATGGTAGTTTTCAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380139.8
ENST00000613078.4
CDS TCA 72 bp ATGAACTCGGATTTTAATAGCCACCTGAGGCAATTCTaGTGGAGTAGTCCACAGATCCACTTTGAAGACACT +
Preference number: 6 (lower is better)
Translates to: MNSDFNSHLRQF*WSSPQIHFEDT
Trigger: AGTGTCTTCAAAGTGGATCTGTGGACTACTCCATCAGAATTGCCTCAGGTGGCTATTAAAATCCGAGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635608.1
CDS CAA 72 bp CTGGAATCTAAGGAGGTTATGCTCTGGTGTTCTGTTTaGGGGGAAAAATTGGCAGAACTTTCGGTTAAACTC +
Preference number: 6 (lower is better)
Translates to: LESKEVMLWCSV*GEKLAELSVKL
Trigger: GAGTTTAACCGAAAGTTCTGCCAATTTTTCCCCCAAAACAGAACACCAGAGCATAACCTCCTTAGATTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000472298.1
CDS CAA 72 bp AACTACCATGTCCATTTCCAGCCTGAAAAGATTCTTTaGTTCGGTCTGAAATACCATGACTGCATAGGGCTT +
Preference number: 6 (lower is better)
Translates to: NYHVHFQPEKIL*FGLKYHDCIGL
Trigger: AAGCCCTATGCAGTCATGGTATTTCAGACCGAACAAAAGAATCTTTTCAGGCTGGAAATGGACATGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380139.8
ENST00000613078.4
CDS CAA 90 bp TCAAGGATTCACACCAAAGACCATTTGCCAAGGACTATTTTTAAATaGTATCCTCAAGTGAGATTAGCATCTCAGCAAACTTCAGCCATT +
Preference number: 6 (lower is better)
Translates to: SRIHTKDHLPRTIFK*YPQVRLASQQTSAI
Trigger: AATGGCTGAAGTTTGCTGAGATGCTAATCTCACTTGAGGATACAATTTAAAAATAGTCCTTGGCAAATGGTCTTTGGTGTGAATCCTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472298.1
CDS CCA 72 bp TTCAGAGCCCACTATCAATCAATAATTTTCTTTCTCTaGAATCTAAGGAGGTTATGCTCTGGTGTTCTGTTT +
Preference number: 6 (lower is better)
Translates to: FRAHYQSIIFFL*NLRRLCSGVLF
Trigger: AAACAGAACACCAGAGCATAACCTCCTTAGATTCCAGAGAAAGAAAATTATTGATTGATAGTGGGCTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472298.1
CDS CAA 72 bp ACAGAAAAGTTATCAAGGATTCACACCAAAGACCATTaGCCAAGGACTATTTTTAAATTGTATCCTCAAGTG +
Preference number: 6 (lower is better)
Translates to: TEKLSRIHTKDH*PRTIFKLYPQV
Trigger: CACTTGAGGATACAATTTAAAAATAGTCCTTGGCAAATGGTCTTTGGTGTGAATCCTTGATAACTTTTCTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472298.1