RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYSM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000162601

Ensembl transcript IDs: ENST00000401044.7, ENST00000472487.6, ENST00000489282.1, ENST00000493821.6, ENST00000622766.1, ENST00000655340.1, ENST00000659108.1, ENST00000659812.1, ENST00000660611.1, ENST00000665648.1

Found 817 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCCCCTTCATTCACTGGTGGCAAGGGCTGCTTGCTTGGCTTCCTaGTCCCTGGGTGGTCAGAGCCACAGCTTCCCAGTGTTCAGAGGC +
Preference number: 1 (lower is better)
Translates to: GPLHSLVARAACLAS*SLGGQSHSFPVFRG
Trigger: GCCTCTGAACACTGGGAAGCTGTGGCTCTGACCACCCAGGGATCAGGAAGCCAAGCAAGCAGCCCTTGCCACCAGTGAATGAAGGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR GCA 90 bp GGAGAACTGCTTTGTAGGGCCCCTTCATTCACTGGTGGCAAGGGCTaGTTGCTTGGCTTCCTGATCCCTGGGTGGTCAGAGCCACAGCTT +
Preference number: 1 (lower is better)
Translates to: GELLCRAPSFTGGKG*LLGFLIPGWSEPQL
Trigger: AAGCTGTGGCTCTGACCACCCAGGGATCAGGAAGCCAAGCAAGCAGCCCTTGCCACCAGTGAATGAAGGGGCCCTACAAAGCAGTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR CCA 90 bp CCACCTAGCAGGACCTTCGCATGCAGCTGCCTCCTTTGGACTGTGTaGATCGACTCTCCACCTGTATTCCAGGTCCTTCCTCTAGCTGGA +
Preference number: 1 (lower is better)
Translates to: PPSRTFACSCLLWTV*IDSPPVFQVLPLAG
Trigger: TCCAGCTAGAGGAAGGACCTGGAATACAGGTGGAGAGTCGATCCACACAGTCCAAAGGAGGCAGCTGCATGCGAAGGTCCTGCTAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR CCA 90 bp GTACGCCTTCCACCTAGCAGGACCTTCGCATGCAGCTGCCTCCTTTaGACTGTGTGGATCGACTCTCCACCTGTATTCCAGGTCCTTCCT +
Preference number: 1 (lower is better)
Translates to: VRLPPSRTFACSCLL*TVWIDSPPVFQVLP
Trigger: AGGAAGGACCTGGAATACAGGTGGAGAGTCGATCCACACAGTCCAAAGGAGGCAGCTGCATGCGAAGGTCCTGCTAGGTGGAAGGCGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR CCA 90 bp CCAGCTTCTTTCTGTAGAGGTACAAGACTCAGCTGCCTTGGCAGCTaGAGAGACTGGCCCCCTGACCCTGAAGGACAATCTGGCCATGCA +
Preference number: 1 (lower is better)
Translates to: PASFCRGTRLSCLGS*RDWPPDPEGQSGHA
Trigger: TGCATGGCCAGATTGTCCTTCAGGGTCAGGGGGCCAGTCTCTCCAGCTGCCAAGGCAGCTGAGTCTTGTACCTCTACAGAAAGAAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR TCA 90 bp TTGTCTGGGGTGAGGGAGGCAGGATTGTTTGGACACAGGAAAAGCTaGACAGAGGCCATCGCCAATCCCATGAGCATCTCTGGAGCTGGC +
Preference number: 1 (lower is better)
Translates to: LSGVREAGLFGHRKS*TEAIANPMSISGAG
Trigger: GCCAGCTCCAGAGATGCTCATGGGATTGGCGATGGCCTCTGTTCAGCTTTTCCTGTGTCCAAACAATCCTGCCTCCCTCACCCCAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR GCA 90 bp TCTGTTGGGTTGAGAGCTGCAGAGGTTCTGACTGTGCTTACAGTCTaGATGTCACAGACCTCAACCCCACTCCTAGGGGCAGGGAAGGAA +
Preference number: 1 (lower is better)
Translates to: SVGLRAAEVLTVLTV*MSQTSTPLLGAGKE
Trigger: TTCCTTCCCTGCCCCTAGGAGTGGGGTTGAGGTCTGTGACATGCAGACTGTAAGCACAGTCAGAACCTCTGCAGCTCTCAACCCAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR GCA 90 bp AATCATTGGATACCAGCTTCTTTCTGTAGAGGTACAAGACTCAGCTaGCTTGGCAGCTGGAGAGACTGGCCCCCTGACCCTGAAGGACAA +
Preference number: 1 (lower is better)
Translates to: NHWIPASFCRGTRLS*LGSWRDWPPDPEGQ
Trigger: TTGTCCTTCAGGGTCAGGGGGCCAGTCTCTCCAGCTGCCAAGGCAGCTGAGTCTTGTACCTCTACAGAAAGAAGCTGGTATCCAATGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR CCA 90 bp CTAGCAGGCCCTAATTGTGGCCTCAGAGGTTCTAGTTCCCTCAGTTaGACAGTAAGAATCATCTGGTGGTCATTTCTGGCAGCCTTGAGT +
Preference number: 1 (lower is better)
Translates to: LAGPNCGLRGSSSLS*TVRIIWWSFLAALS
Trigger: ACTCAAGGCTGCCAGAAATGACCACCAGATGATTCTTACTGTCCAACTGAGGGAACTAGAACCTCTGAGGCCACAATTAGGGCCTGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR TCA 90 bp TGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCATCCTaGCTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAG +
Preference number: 1 (lower is better)
Translates to: CFVSTKQSNINSRAS*LLVPPAHLIRTQEE
Trigger: CTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGATGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR CCA 90 bp ACCCTACGTCTCCTTGTACGCATAGACTGCAGACGCTGGGCAAGTTaGTATGCTTCTACTGCATCTTTTCTGTCTCTGATTCGTACTTTG +
Preference number: 1 (lower is better)
Translates to: TLRLLVRIDCRRWAS*YASTASFLSLIRTL
Trigger: CAAAGTACGAATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAGGAGACGTAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR GCA 90 bp ACGTCTCCTTGTACGCATAGACTGCAGACGCTGGGCAAGTTGGTATaGTTCTACTGCATCTTTTCTGTCTCTGATTCGTACTTTGTCAAC +
Preference number: 1 (lower is better)
Translates to: TSPCTHRLQTLGKLV*FYCIFSVSDSYFVN
Trigger: GTTGACAAAGTACGAATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAGGAGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR TCA 90 bp TGGATGGCTTCAACTCAGGTGCTCATGTGTTACATGGCTGTTTTGTaGGCACAAAACAGAGCAACATCAATTCCAGGGCATCCTGACTAT +
Preference number: 1 (lower is better)
Translates to: WMASTQVLMCYMAVL*AQNRATSIPGHPDY
Trigger: ATAGTCAGGATGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGAGCACCTGAGTTGAAGCCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR TCA 90 bp ACCCTTACTGAATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTaGCTTGCGACTGGATGGCTTCAACTCAGGTGCTCATGTGTTACA +
Preference number: 1 (lower is better)
Translates to: TLTEFLLRIPSTAVC*LATGWLQLRCSCVT
Trigger: TGTAACACATGAGCACCTGAGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAATTCAGTAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR GCA 90 bp ATCATCTGGTGGTCATTTCTGGCAGCCTTGAGTAGAACCCAGAGCTaGACCCCTTTCCAACAGTTTTATAAGCATCCAATTTCCTGTGTT +
Preference number: 1 (lower is better)
Translates to: IIWWSFLAALSRTQS*TPFQQFYKHPISCV
Trigger: AACACAGGAAATTGGATGCTTATAAAACTGTTGGAAAGGGGTGCAGCTCTGGGTTCTACTCAAGGCTGCCAGAAATGACCACCAGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR CCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTaGATGGCTTCAACTCAGGTGCTCATGTGTTACATGGCTGTTTTG +
Preference number: 1 (lower is better)
Translates to: ISTENSINCCLLTCD*MASTQVLMCYMAVL
Trigger: CAAAACAGCCATGTAACACATGAGCACCTGAGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR GCA 90 bp GAGGAAACAGGTCAAAAGGAAGATGAGTACAAAGGAATCAATCACTaGCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGAATAC +
Preference number: 1 (lower is better)
Translates to: EETGQKEDEYKGINH*LSQNHATSELGREY
Trigger: GTATTCCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTTTGTACTCATCTTCCTTTTGACCTGTTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR TCA 90 bp GATATTAATAGAGGGTTTCCAGGTAGGCTAGAGTGGAAATGCTCTTaGCAGAAGATAGAGCACGTACAACACACCAGTCTATGGAAAAGC +
Preference number: 1 (lower is better)
Translates to: DINRGFPGRLEWKCS*QKIEHVQHTSLWKS
Trigger: GCTTTTCCATAGACTGGTGTGTTGTACGTGCTCTATCTTCTGTCAAGAGCATTTCCACTCTAGCCTACCTGGAAACCCTCTATTAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR CCA 90 bp GGCCCCAAACTCTTGACAAGTATCATCCTTGAGATCCTCGCAATATaGCTTAGATTAGCAAATATGGTTAAACATTGGCACACAGGGCAA +
Preference number: 1 (lower is better)
Translates to: GPKLLTSIILEILAI*LRLANMVKHWHTGQ
Trigger: TTGCCCTGTGTGCCAATGTTTAACCATATTTGCTAATCTAAGCCATATTGCGAGGATCTCAAGGATGATACTTGTCAAGAGTTTGGGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR CCA 90 bp GGGGAGGCAGCAACTGCTTTGAGTCAAAGTTGTTATACTAAACTCTaGAGGAAAGAAAGAAGCCCAAGGGGTGAACATCATATATTCATC +
Preference number: 1 (lower is better)
Translates to: GEAATALSQSCYTKL*RKERSPRGEHHIFI
Trigger: GATGAATATATGATGTTCACCCCTTGGGCTTCTTTCTTTCCTCCAGAGTTTAGTATAACAACTTTGACTCAAAGCAGTTGCTGCCTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR GCA 90 bp ATGGACAGAAGACTGGGAGCAGCATTAAATAGCTTCATGGAAACATaGATGGTCTGTCCATCTCTATTTTACAGGCCTAGCTTTCAACAA +
Preference number: 1 (lower is better)
Translates to: MDRRLGAALNSFMET*MVCPSLFYRPSFQQ
Trigger: TTGTTGAAAGCTAGGCCTGTAAAATAGAGATGGACAGACCATGCATGTTTCCATGAAGCTATTTAATGCTGCTCCCAGTCTTCTGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR CCA 90 bp CCTACAGCATTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTaGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATTTG +
Preference number: 1 (lower is better)
Translates to: PTALLSKGLEHRGGP*FAEHSDNHYMKTNL
Trigger: CAAATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAATGCTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR GCA 90 bp GGGATTATTTCGATTATAGGGACTAACAATCATCCCAATGAACTTTaGACCTCCTCTGGAGAAGTAACTCTGGTATTTAGCTTGTGTGTC +
Preference number: 1 (lower is better)
Translates to: GIISIIGTNNHPNEL*TSSGEVTLVFSLCV
Trigger: GACACACAAGCTAAATACCAGAGTTACTTCTCCAGAGGAGGTGCAAAGTTCATTGGGATGATTGTTAGTCCCTATAATCGAAATAATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR CCA 90 bp GAGATCCTCGCAATATGGCTTAGATTAGCAAATATGGTTAAACATTaGCACACAGGGCAAGGAGACTCAGATTTGAGAGCAGAACTTTTA +
Preference number: 1 (lower is better)
Translates to: EILAIWLRLANMVKH*HTGQGDSDLRAELL
Trigger: TAAAAGTTCTGCTCTCAAATCTGAGTCTCCTTGCCCTGTGTGCCAATGTTTAACCATATTTGCTAATCTAAGCCATATTGCGAGGATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR CCA 90 bp GAGGCAAGGACTCCAGGTATTTGTACTCCTATAGTTACCAGTCATTaGATAACTAATCATTGGATACCAGCTTCTTTCTGTAGAGGTACA +
Preference number: 1 (lower is better)
Translates to: EARTPGICTPIVTSH*ITNHWIPASFCRGT
Trigger: TGTACCTCTACAGAAAGAAGCTGGTATCCAATGATTAGTTATCCAATGACTGGTAACTATAGGAGTACAAATACCTGGAGTCCTTGCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR CCA 90 bp TCAAATTTTTCTGAATTTCACAAGGCTCTGGAGAAGGCAACTGCCTaGCATCAACTATTATTCCCCTTCCATCATGCTTGTTGCAGTTTT +
Preference number: 1 (lower is better)
Translates to: SNFSEFHKALEKATA*HQLLFPFHHACCSF
Trigger: AAAACTGCAACAAGCATGATGGAAGGGGAATAATAGTTGATGCCAGGCAGTTGCCTTCTCCAGAGCCTTGTGAAATTCAGAAAAATTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR CCA 90 bp AAATGGAGAGGAAAGAAAGGTAGTAGGATGTTTCCCTTTCAAGTGTaGCACGAGTTTCAAAACTACAGATTAGGGACTGACCAAAACAAA +
Preference number: 1 (lower is better)
Translates to: KWRGKKGSRMFPFQV*HEFQNYRLGTDQNK
Trigger: TTTGTTTTGGTCAGTCCCTAATCTGTAGTTTTGAAACTCGTGCCACACTTGAAAGGGAAACATCCTACTACCTTTCTTTCCTCTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR CCA 90 bp GGTATTTGTACTCCTATAGTTACCAGTCATTGGATAACTAATCATTaGATACCAGCTTCTTTCTGTAGAGGTACAAGACTCAGCTGCCTT +
Preference number: 1 (lower is better)
Translates to: GICTPIVTSHWITNH*IPASFCRGTRLSCL
Trigger: AAGGCAGCTGAGTCTTGTACCTCTACAGAAAGAAGCTGGTATCCAATGATTAGTTATCCAATGACTGGTAACTATAGGAGTACAAATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR TCA 90 bp TGTTCACATCCAAAATTGATTGCTCCTATCAATTCGAGGTATGTATaGATCCGTCCAATACAATTAACATCTCCACAGTTCTTCAGGCCA +
Preference number: 1 (lower is better)
Translates to: CSHPKLIAPINSRYV*IRPIQLTSPQFFRP
Trigger: TGGCCTGAAGAACTGTGGAGATGTTAATTGTATTGGACGGATTCATACATACCTCGAATTGATAGGAGCAATCAATTTTGGATGTGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR GCA 90 bp GGAGAAGGCAACTGCCTGGCATCAACTATTATTCCCCTTCCATCATaGTTGTTGCAGTTTTTAATCAATTCATTAAATTTCTGGTCATTT +
Preference number: 1 (lower is better)
Translates to: GEGNCLASTIIPLPS*LLQFLINSLNFWSF
Trigger: AAATGACCAGAAATTTAATGAATTGATTAAAAACTGCAACAAGCATGATGGAAGGGGAATAATAGTTGATGCCAGGCAGTTGCCTTCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR CCA 90 bp ACACACACACACACACAAAGAAGAATGTCTCATAGACATCATATGTaGCCTGAAAAGCCAAAATTATTTACAAACTGGCCCTTTACATTA +
Preference number: 1 (lower is better)
Translates to: THTHTQRRMSHRHHM*PEKPKLFTNWPFTL
Trigger: TAATGTAAAGGGCCAGTTTGTAAATAATTTTGGCTTTTCAGGCCACATATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659812.1
ENST00000665648.1
3UTR CAA 90 bp GAACTGCTTTGTAGGGCCCCTTCATTCACTGGTGGCAAGGGCTGCTaGCTTGGCTTCCTGATCCCTGGGTGGTCAGAGCCACAGCTTCCC +
Preference number: 2 (lower is better)
Translates to: ELLCRAPSFTGGKGC*LGFLIPGWSEPQLP
Trigger: GGGAAGCTGTGGCTCTGACCACCCAGGGATCAGGAAGCCAAGCAAGCAGCCCTTGCCACCAGTGAATGAAGGGGCCCTACAAAGCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CCA 90 bp GAGGCCATCGCCAATCCCATGAGCATCTCTGGAGCTGGCATGTCTCTACTGAGTTGGCTTCCTGATCCCTaGGTGGTCAGAGCCACAGCT +
Preference number: 2 (lower is better)
Translates to: EAIANPMSISGAGMSLLSWLPDP*VVRATA
Trigger: AGCTGTGGCTCTGACCACCCAGGGATCAGGAAGCCA...ACTCAGTAGAGACATGCCAGCTCCAGAGATGCTCATGGGATTGGCGATGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR GCA 90 bp GAGGCCATCGCCAATCCCATGAGCATCTCTGGAGCTGGCATGTCTCTACTGAGTAGCAGGACCTTCGCATaGAGCTGCCTCCTTTGGACT +
Preference number: 2 (lower is better)
Translates to: EAIANPMSISGAGMSLLSSRTFA*SCLLWT
Trigger: AGTCCAAAGGAGGCAGCTGCATGCGAAGGTCCTGCT...ACTCAGTAGAGACATGCCAGCTCCAGAGATGCTCATGGGATTGGCGATGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CCA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCACTTCTCCAAGGACTGTaGTGGTGGGAGAAGGGGACA +
Preference number: 2 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPLLQGL*WWEKGT
Trigger: TGTCCCCTTCTCCCACCACCACAGTCCTTGGAGAAG...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCATGCAGTGCTCCTGGATaGAGTGGCAAAGGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPCSAPG*SGKGFS
Trigger: GGAGAAGCCTTTGCCACTCCATCCAGGAGCACTGCA...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR CAA 90 bp ATTGGATACCAGCTTCTTTCTGTAGAGGTACAAGACTCAGCTGCCTaGGCAGCTGGAGAGACTGGCCCCCTGACCCTGAAGGACAATCTG +
Preference number: 2 (lower is better)
Translates to: IGYQLLSVEVQDSAA*AAGETGPLTLKDNL
Trigger: CAGATTGTCCTTCAGGGTCAGGGGGCCAGTCTCTCCAGCTGCCAAGGCAGCTGAGTCTTGTACCTCTACAGAAAGAAGCTGGTATCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR GCA 90 bp GGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGAAAATCAGGCAACGACCTTCGCATGCAGCTaGCTCCTTTGGACTGTGTGG +
Preference number: 2 (lower is better)
Translates to: GQSGHAPQYPPQRENQATTFACS*LLWTVW
Trigger: CCACACAGTCCAAAGGAGGCAGCTGCATGCGAAGGT...CGTTGCCTGATTTTCTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CCA 90 bp ACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGGAGGACACCGTGGTGGACCCTaGTTTGCAGAACACTCTGAT +
Preference number: 2 (lower is better)
Translates to: TIGSSSSPHQDPGREMGGHRGGP*FAEHSD
Trigger: ATCAGAGTGTTCTGCAAACCAGGGTCCACCACGGTG...TCCTCCCATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCAGTAGTGCCAGCAATGTaGGTACCTGTGGTTGCAAAA +
Preference number: 2 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPVVPAM*VPVVAK
Trigger: TTTTGCAACCACAGGTACCCACATTGCTGGCACTAC...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGCTTCTCCAAGGACTGTaGTGGTGGGAGAAGGGGACA +
Preference number: 2 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMLLQGL*WWEKGT
Trigger: TGTCCCCTTCTCCCACCACCACAGTCCTTGGAGAAG...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp CCCCTGACCCTGAAGGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGGTAAGAATCATCTGGTaGTCATTTCTGGCAGCCTTG +
Preference number: 2 (lower is better)
Translates to: PLTLKDNLAMHLSIHHREVRIIW*SFLAAL
Trigger: CAAGGCTGCCAGAAATGACCACCAGATGATTCTTAC...CTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCCTTCAGGGTCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CCA 90 bp CTTCCCTTCCCCAGAGAACCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTACAAGGGCTGCTTGCTTaGCTTCCTGATCCCTGGGTG +
Preference number: 2 (lower is better)
Translates to: LPFPREPKSGTIPPSGTLQGLLA*LPDPWV
Trigger: CACCCAGGGATCAGGAAGCCAAGCAAGCAGCCCTTG...TAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGGTTCTCTGGGGAAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CCA 90 bp ACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGGAGGAACTAGAACACCGTGGTaGACCCTGGTTTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: TIGSSSSPHQDPGREMGGTRTPW*TLVCRT
Trigger: TGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGT...TCCTCCCATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp CTTCCCTTCCCCAGAGAACCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTACCCTTCATTCACTGGTaGCAAGGGCTGCTTGCTTGG +
Preference number: 2 (lower is better)
Translates to: LPFPREPKSGTIPPSGTLPFIHW*QGLLAW
Trigger: CCAAGCAAGCAGCCCTTGCCACCAGTGAATGAAGGG...TAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGGTTCTCTGGGGAAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR TCA 90 bp ACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGGAGGACCCAAATCACAAAGTTaGGACAAGAACCAGGTCACC +
Preference number: 2 (lower is better)
Translates to: TIGSSSSPHQDPGREMGGPKSQS*DKNQVT
Trigger: GGTGACCTGGTTCTTGTCTCAACTTTGTGATTTGGG...TCCTCCCATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp CTTCCCTTCCCCAGAGAACCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTACATTTCTGGCAGCCTTaGGTAGAACCCAGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: LPFPREPKSGTIPPSGTLHFWQP*VEPRAA
Trigger: TGCAGCTCTGGGTTCTACTCAAGGCTGCCAGAAATG...TAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGGTTCTCTGGGGAAGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR TCA 90 bp TGTCCTATTGAGGCAAGGACTCCAGGTATTTGTACTCCTATAGTTACCAGTCATGCTTGCTTGGCTTCCTaGTCCCTGGGTGGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: CPIEARTPGICTPIVTSHACLAS*SLGGQS
Trigger: GCTCTGACCACCCAGGGATCAGGAAGCCAAGCAAGC...ATGACTGGTAACTATAGGAGTACAAATACCTGGAGTCCTTGCCTCAATAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CCA 90 bp ACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGGAGGACGCAACTTCGGAGCTTaGAAGGGAATACTAAGCCAT +
Preference number: 2 (lower is better)
Translates to: TIGSSSSPHQDPGREMGGRNFGA*KGILSH
Trigger: ATGGCTTAGTATTCCCTTCCAAGCTCCGAAGTTGCG...TCCTCCCATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp AGAAATGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTGGCATGTTGAAGAGGGAAGGAATGGTATaGACAGAAGACTGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: RNGRKVMQRRPAQVGMLKREGMV*TEDWEQ
Trigger: CTGCTCCCAGTCTTCTGTCCATACCATTCCTTCCCT...CTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp ACAGCTATTAGAGCCCCCTGTCTGTTGTTATCTGATCTAAGACACCCTTCCCTTTGGGAGGCTGAGGCATaGGAATTGCTTGAATCCAGG +
Preference number: 2 (lower is better)
Translates to: TAIRAPCLLLSDLRHPSLWEAEA*ELLESR
Trigger: CCTGGATTCAAGCAATTCTCATGCCTCAGCCTCCCA...AAGGGAAGGGTGTCTTAGATCAGATAACAACAGACAGGGGGCTCTAATAGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR TCA 90 bp GGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGAAAATCAGGCAACGCTGTCTGTTGTTATCTaGTCTAAGACACCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: GQSGHAPQYPPQRENQATLSVVI*SKTPFP
Trigger: AGGGAAGGGTGTCTTAGATCAGATAACAACAGACAG...CGTTGCCTGATTTTCTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR GCA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCACTAAAGCTGACTCACTaGTTCTTCCAATACTCCTTA +
Preference number: 2 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPLKLTH*FFQYSL
Trigger: TAAGGAGTATTGGAAGAAGCAGTGAGTCAGCTTTAG...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp CTCTTGGCAACAACACTTGTCTGGGGTGAGGGAGGCAGGATTGTTTGGACACAGAGAATATCAGAGTTCTaGATGCTGATTGGGTTCTGC +
Preference number: 2 (lower is better)
Translates to: LLATTLVWGEGGRIVWTQRISEF*MLIGFC
Trigger: GCAGAACCCAATCAGCATGCAGAACTCTGATATTCT...CTGTGTCCAAACAATCCTGCCTCCCTCACCCCAGACAAGTGTTGTTGCCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CCA 90 bp CTGCAGACGCTGGGCAAGTTGGTATGCTTCTACTGCATCTTTTCTGTCTCTGATACTAGAACACCGTGGTaGACCCTGGTTTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: LQTLGKLVCFYCIFSVSDTRTPW*TLVCRT
Trigger: TGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGT...ATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CCA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTAACTAGAACACCGTGGTaGACCCTGGTTTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLTRTPW*TLVCRT
Trigger: TGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGT...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTCACAGTCTCCTCTGTTaGGTTGAGAGCTGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: ISTENSINCCLLTCDWMAHSLLC*VESCRG
Trigger: ACCTCTGCAGCTCTCAACCCAACAGAGGAGACTGTG...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTACACCAGTTTCCCCATaGGTCTCGGACCCTACGTCT +
Preference number: 2 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSTPVSP*VSDPTS
Trigger: AGACGTAGGGTCCGAGACCCATGGGGAAACTGGTGT...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR CAA 90 bp GACCCTACGTCTCCTTGTACGCATAGACTGCAGACGCTGGGCAAGTaGGTATGCTTCTACTGCATCTTTTCTGTCTCTGATTCGTACTTT +
Preference number: 2 (lower is better)
Translates to: DPTSPCTHRLQTLGK*VCFYCIFSVSDSYF
Trigger: AAAGTACGAATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAGGAGACGTAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR TCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGACAAGTATCATCCTTaGGATCCTCGCAATATGGCT +
Preference number: 2 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMDKYHP*DPRNMA
Trigger: AGCCATATTGCGAGGATCTCAAGGATGATACTTGTC...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp CCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTACTGTCCTCTGTCTATAGAGGCAGGCAGATCACTTaGGGTCAGGAATTCAAGACC +
Preference number: 2 (lower is better)
Translates to: PKSGTIPPSGTLLSSVYRGRQIT*GQEFKT
Trigger: GGTCTTGAATTCCTGACCTCAAGTGATCTGCCTGCC...TCTATAGACAGAGGACAGTAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR TCA 90 bp TTGGCAGGATTTGAACCCAGGCAGTCAGGCTCGAGAGTTCTGCTTTTAACTTATTTCTTCTGGGGTGTTTaGGAAGACAACTCGTCCACC +
Preference number: 2 (lower is better)
Translates to: LAGFEPRQSGSRVLLLTYFFWGV*EDNSST
Trigger: GGTGGACGAGTTGTCTTCTCAAACACCCCAGAAGAA...ATAAGTTAAAAGCAGAACTCTCGAGCCTGACTGCCTGGGTTCAAATCCTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR GCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGTTCCTTTGAGACTCTaGCTCCTGAACTTCCTGTAT +
Preference number: 2 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMVPLRL*LLNFLY
Trigger: ATACAGGAAGTTCAGGAGGCAGAGTCTCAAAGGAAC...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTAAACTGCAGTGCTCCTaGATGGAGTGGCAAAGGCTT +
Preference number: 2 (lower is better)
Translates to: ISTENSINCCLLTCDWMAKLQCS*MEWQRL
Trigger: AAGCCTTTGCCACTCCATCCAGGAGCACTGCAGTTT...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp CCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTACTGTCCTCTGTCTATAGAGGGGACGCTAGCAAGTaGGACTGTGGAGATGTGAAT +
Preference number: 2 (lower is better)
Translates to: PKSGTIPPSGTLLSSVYRGDASK*DCGDVN
Trigger: ATTCACATCTCCACAGTCCCACTTGCTAGCGTCCCC...TCTATAGACAGAGGACAGTAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR TCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGAAGACAGAATCAGGATaGAGACACCTGCATGTCTTT +
Preference number: 2 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMKTESG*RHLHVF
Trigger: AAAGACATGCAGGTGTCTTCATCCTGATTCTGTCTT...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTCACCGTGGTGGACCCTaGTTTGCAGAACACTCTGAT +
Preference number: 2 (lower is better)
Translates to: YTPKVSANKSGQNPGERFHRGGP*FAEHSD
Trigger: ATCAGAGTGTTCTGCAAACCAGGGTCCACCACGGTG...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ACCCTACGTCTCCTTGTACGCATAGACTGCAGACGCTGGGCAAGTTGGTATGCTTTGATAAGAGCCATCTaGGCTAATTTCCTCACTTAT +
Preference number: 2 (lower is better)
Translates to: TLRLLVRIDCRRWASWYALIRAI*ANFLTY
Trigger: ATAAGTGAGGAAATTAGCCCAGATGGCTCTTATCAA...AGCATACCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAGGAGACGTAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CCA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTGAAAGATTTTATCCATaGGGACGCTGCTATGGGAGA +
Preference number: 2 (lower is better)
Translates to: TENSINCCLLTCDWMASTERFYP*GRCYGR
Trigger: TCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTC...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665648.1
3UTR-3UTR CCA 90 bp AGTTGGACAGTAAGAATCATCTGGTGGTCATTTCTGGCAGCCTTGAGTAGAACCAAAATTAGCCAGGGATaGTGGCACGGGCCTGTAATT +
Preference number: 2 (lower is better)
Translates to: SWTVRIIWWSFLAALSRTKISQG*WHGPVI
Trigger: AATTACAGGCCCGTGCCACCATCCCTGGCTAATTTT...GGTTCTACTCAAGGCTGCCAGAAATGACCACCAGATGATTCTTACTGTCCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CCA 90 bp TTGGCAGGATTTGAACCCAGGCAGTCAGGCTCGAGAGTTCTGCTTTTAACTTATAGACGCTGGGCAAGTTaGTATGCTTCTACTGCATCT +
Preference number: 2 (lower is better)
Translates to: LAGFEPRQSGSRVLLLTYRRWAS*YASTAS
Trigger: AGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCT...ATAAGTTAAAAGCAGAACTCTCGAGCCTGACTGCCTGGGTTCAAATCCTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CCA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTATAGACTGCAGACGCTaGGCAAGTTGGTATGCTTCT +
Preference number: 2 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLIDCRR*ASWYAS
Trigger: AGAAGCATACCAACTTGCCCAGCGTCTGCAGTCTAT...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR TCA 90 bp CCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTACTGTCCTCTGTCTATAGAGGCATGAGAATTGCTTaGATCCAGGAGGTAGAGGTT +
Preference number: 2 (lower is better)
Translates to: PKSGTIPPSGTLLSSVYRGMRIA*IQEVEV
Trigger: AACCTCTACCTCCTGGATTCAAGCAATTCTCATGCC...TCTATAGACAGAGGACAGTAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR GCA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTAGCTTCATGGAAACATaGATGGTCTGTCCATCTCTA +
Preference number: 2 (lower is better)
Translates to: TENSINCCLLTCDWMASTSFMET*MVCPSL
Trigger: TAGAGATGGACAGACCATGCATGTTTCCATGAAGCT...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTCATCCCAATGAACTTTaGACCTCCTCTGGAGAAGTA +
Preference number: 2 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLHPNEL*TSSGEV
Trigger: TACTTCTCCAGAGGAGGTGCAAAGTTCATTGGGATG...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTTCCTCAGCAGAGAGATaGTCAAACGTTTGTCCTTCT +
Preference number: 2 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLSSAER*SNVCPS
Trigger: AGAAGGACAAACGTTTGAGCATCTCTCTGCTGAGGA...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CCA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGCACCGTGGTGGACCCTaGTTTGCAGAACACTCTGAT +
Preference number: 2 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQHRGGP*FAEHSD
Trigger: ATCAGAGTGTTCTGCAAACCAGGGTCCACCACGGTG...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp GTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTTGCTCAGAGTCTTCCTCACTAGAACACCGTGGTaGACCCTGGTTTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: VKNSSAIKQLVTLLRVFLTRTPW*TLVCRT
Trigger: TGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGT...GAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGGAGGACAATGTGGGTACCTGTaGTTGCAAAATTGTTTTAAG +
Preference number: 2 (lower is better)
Translates to: TIGSSSSPHQDPGREMGGQCGYL*LQNCFK
Trigger: CTTAAAACAATTTTGCAACCACAGGTACCCACATTG...TCCTCCCATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp AGAAATGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTGGCATGTTGAAGTTTCCCTTTCAAGTGTaGCACGAGTTTCAAAACTAC +
Preference number: 2 (lower is better)
Translates to: RNGRKVMQRRPAQVGMLKFPFQV*HEFQNY
Trigger: GTAGTTTTGAAACTCGTGCCACACTTGAAAGGGAAA...CTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp TGTATGAATCCGTCCAATACAATTAACATCTCCACAGTTCTTCAGGCCAGGACGCGTCCACCTCATCTGTaGTGTCTACTTCTTCATCAT +
Preference number: 2 (lower is better)
Translates to: CMNPSNTINISTVLQARTRPPHL*CLLLHH
Trigger: ATGATGAAGAAGTAGACATCACAGATGAGGTGGACG...CGTCCTGGCCTGAAGAACTGTGGAGATGTTAATTGTATTGGACGGATTCATACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR GCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTAAGATTTTCTTGTCATaGCTCTCCTGGTCTCCTGTT +
Preference number: 2 (lower is better)
Translates to: ISTENSINCCLLTCDWMAKIFLS*LSWSPV
Trigger: AACAGGAGACCAGGAGAGGCATGACAAGAAAATCTT...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp ATACTAAGCCATAAAATTCAGGCCCTTGATTTACTGGTGAGGAGCATGGGGTCCAAGATTTTCTTGTCATaGCTCTCCTGGTCTCCTGTT +
Preference number: 2 (lower is better)
Translates to: ILSHKIQALDLLVRSMGSKIFLS*LSWSPV
Trigger: AACAGGAGACCAGGAGAGGCATGACAAGAAAATCTT...GGACCCCATGCTCCTCACCAGTAAATCAAGGGCCTGAATTTTATGGCTTAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTAAAGGAATCAATCACTaGCTTTCACAGAATCACGCA +
Preference number: 2 (lower is better)
Translates to: TENSINCCLLTCDWMASTKGINH*LSQNHA
Trigger: TGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTTT...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp TGTCCTATTGAGGCAAGGACTCCAGGTATTTGTACTCCTATAGTTACCAGTCATAGTAGAACCCAGAGCTaGACCCCTTTCCAACAGTTT +
Preference number: 2 (lower is better)
Translates to: CPIEARTPGICTPIVTSHSRTQS*TPFQQF
Trigger: AAACTGTTGGAAAGGGGTGCAGCTCTGGGTTCTACT...ATGACTGGTAACTATAGGAGTACAAATACCTGGAGTCCTTGCCTCAATAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTAATATGGTTAAACATTaGCACACAGGGCAAGGAGAC +
Preference number: 2 (lower is better)
Translates to: ISTENSINCCLLTCDWMANMVKH*HTGQGD
Trigger: GTCTCCTTGCCCTGTGTGCCAATGTTTAACCATATT...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp AGAAATGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTGGCATGTTGAAGGAGATCCTCGCAATATaGCTTAGATTAGCAAATATG +
Preference number: 2 (lower is better)
Translates to: RNGRKVMQRRPAQVGMLKEILAI*LRLANM
Trigger: CATATTTGCTAATCTAAGCCATATTGCGAGGATCTC...CTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTGAGTTTTCGTTAGGTTaGGAAGGAAGTAAGTTCAAG +
Preference number: 2 (lower is better)
Translates to: TENSINCCLLTCDWMASTEFSLG*EGSKFK
Trigger: CTTGAACTTACTTCCTTCCCAACCTAACGAAAACTC...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTTGCTCATGTGTTACATaGCTGTTTTGTGAGCACAAA +
Preference number: 2 (lower is better)
Translates to: TENSINCCLLTCDWMASTCSCVT*LFCEHK
Trigger: TTTGTGCTCACAAAACAGCCATGTAACACATGAGCA...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTATGGGGACGCTGCTATaGGAGAGCCTGTATTTTTCT +
Preference number: 2 (lower is better)
Translates to: TLQKFLQTSQVRIPAKDFMGTLL*ESLYFS
Trigger: AGAAAAATACAGGCTCTCCCATAGCAGCGTCCCCAT...AAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp TATAAACCATCAACAGTAGAGTTTCATAGTTCAGGTTCCCAGACAGACTCTGATTGCAGCTGCCTCCTTTaGACTGTGTGGATCGACTCT +
Preference number: 2 (lower is better)
Translates to: YKPSTVEFHSSGSQTDSDCSCLL*TVWIDS
Trigger: AGAGTCGATCCACACAGTCCAAAGGAGGCAGCTGCA...ATCAGAGTCTGTCTGGGAACCTGAACTATGAAACTCTACTGTTGATGGTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTGCGATAAGAGCCATCTaGGCTAATTTCCTCACTTAT +
Preference number: 2 (lower is better)
Translates to: ISTENSINCCLLTCDWMAAIRAI*ANFLTY
Trigger: ATAAGTGAGGAAATTAGCCCAGATGGCTCTTATCGC...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665648.1
3UTR-3UTR TCA 90 bp GTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCACTGCTATTTTTCCAATaGTGCCCTTCAGAATACAGG +
Preference number: 2 (lower is better)
Translates to: VLHGCFVSTKQSNINSRALLFFQ*CPSEYR
Trigger: CCTGTATTCTGAAGGGCATCATTGGAAAAATAGCAG...TGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp GTAGTCCTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTAATACTAATCCCCACTaGGGTTCTTCTAACATCTGC +
Preference number: 2 (lower is better)
Translates to: VVLYSDCYMVLLHRLQLLNTNPH*GSSNIC
Trigger: GCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATT...AAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAGGACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTTTATGGCCGGTCTTCTaGTTTGGTGTTTCTTTATCC +
Preference number: 2 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSLWPVF*FGVSLS
Trigger: GGATAAAGAAACACCAAATCAGAAGACCGGCCATAA...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR GCA 90 bp AGAAATGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTGGCATGTTGAAGACTGTTTATCCTAAGTaGACACAGAGAAATGGAAAA +
Preference number: 2 (lower is better)
Translates to: RNGRKVMQRRPAQVGMLKTVYPK*TQRNGK
Trigger: TTTTCCATTTCTCTGTGTGCACTTAGGATAAACAGT...CTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp TGTATGAATCCGTCCAATACAATTAACATCTCCACAGTTCTTCAGGCCAGGACGACTGTTACATGGTTCTaGTGCACAGACTTCAACTAC +
Preference number: 2 (lower is better)
Translates to: CMNPSNTINISTVLQARTTVTWF*CTDFNY
Trigger: GTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGT...CGTCCTGGCCTGAAGAACTGTGGAGATGTTAATTGTATTGGACGGATTCATACA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR GCA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGCACTCCAAAAGTTTCTaGAAACAAGTCAGGTCAGAA +
Preference number: 2 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKHSKSF*KQVRSE
Trigger: TTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTG...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665648.1
3UTR-3UTR CCA 90 bp TATTTAGCTTGTGTGTCAATATCTCGTAAGGAAGGATTAGGATCAAAAGCAGGACACCGTGGTGGACCCTaGTTTGCAGAACACTCTGAT +
Preference number: 2 (lower is better)
Translates to: YLACVSISRKEGLGSKAGHRGGP*FAEHSD
Trigger: ATCAGAGTGTTCTGCAAACCAGGGTCCACCACGGTG...TCCTGCTTTTGATCCTAATCCTTCCTTACGAGATATTGACACACAAGCTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTTTGTCATGCCTCTCCTaGTCTCCTGTTAGATTTATT +
Preference number: 2 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLLSCLS*SPVRFI
Trigger: AATAAATCTAACAGGAGACCAGGAGAGGCATGACAA...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGAGGTTTCCTGACTTTTaGTATAGTTCCTCTTACACT +
Preference number: 2 (lower is better)
Translates to: KESITAFHRITQLRSLEGRFPDF*YSSSYT
Trigger: AGTGTAAGAGGAACTATACCAAAAGTCAGGAAACCT...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp CCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTACTGTCCTCTGTCTATAGATCTAGTTCCCTCAGTTaGACAGTAAGAATCATCTGG +
Preference number: 2 (lower is better)
Translates to: PKSGTIPPSGTLLSSVYRSSSLS*TVRIIW
Trigger: CCAGATGATTCTTACTGTCCAACTGAGGGAACTAGA...TCTATAGACAGAGGACAGTAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CCA 90 bp TTGGCAGGATTTGAACCCAGGCAGTCAGGCTCGAGAGTTCTGCTTTTAACTTATTTCTATTTCCTGTTCTaGTGGCTTAAGCTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: LAGFEPRQSGSRVLLLTYFYFLF*WLKLFF
Trigger: GAAGAAGAGCTTAAGCCACCAGAACAGGAAATAGAA...ATAAGTTAAAAGCAGAACTCTCGAGCCTGACTGCCTGGGTTCAAATCCTGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CCA 90 bp CTTCTGAGCCCAAACTCATTCCACCTCCCTAGAAGAGCTAATCTAAGACTAGACTTTGTCAACTGTTTGTaGCCTATTATACACAGCCTG +
Preference number: 2 (lower is better)
Translates to: LLSPNSFHLPRRANLRLDFVNCL*PIIHSL
Trigger: CAGGCTGTGTATAATAGGCCACAAACAGTTGACAAA...GTCTAGTCTTAGATTAGCTCTTCTAGGGAGGTGGAATGAGTTTGGGCTCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR TCA 90 bp GTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCAAGTTCAGGGAAGAAATaGCTTAGAGACATAGTCCAA +
Preference number: 2 (lower is better)
Translates to: VLHGCFVSTKQSNINSRASSGKK*LRDIVQ
Trigger: TTGGACTATGTCTCTAAGTCATTTCTTCCCTGAACT...TGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp ATACTAAGCCATAAAATTCAGGCCCTTGATTTACTGGTGAGGAGCATGGGGTCCGATTCAGAAAGCATATaGAACTGGGCTGAATATGTA +
Preference number: 2 (lower is better)
Translates to: ILSHKIQALDLLVRSMGSDSESI*NWAEYV
Trigger: TACATATTCAGCCCAGTTTCATATGCTTTCTGAATC...GGACCCCATGCTCCTCACCAGTAAATCAAGGGCCTGAATTTTATGGCTTAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTCTGAATTTCAATAAATaGGGCAGCATTGACTGCTTA +
Preference number: 2 (lower is better)
Translates to: ISTENSINCCLLTCDWMALNFNK*GSIDCL
Trigger: TAAGCAGTCAATGCTGCCTCATTTATTGAAATTCAG...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp ATTAGGATCAAAAGCAGGATGAGAATGATACCATCCAATAACACTGAAGCCTCTCCCAAATCACAAAGTTaGGACAAGAACCAGGTCACC +
Preference number: 2 (lower is better)
Translates to: IRIKSRMRMIPSNNTEASPKSQS*DKNQVT
Trigger: GGTGACCTGGTTCTTGTCTCAACTTTGTGATTTGGG...AGAGGCTTCAGTGTTATTGGATGGTATCATTCTCATCCTGCTTTTGATCCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665648.1
3UTR-3UTR TCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCAGAGCTGCAGAGGTTCTaGCTGTGCTTACAGTCTGCA +
Preference number: 2 (lower is better)
Translates to: IISVTTHPYLIYSHKQISELQRF*LCLQSA
Trigger: TGCAGACTGTAAGCACAGTCAGAACCTCTGCAGCTC...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp ACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTTCTGGAGAAGGCAACTaGCTGGCATCAACTATTATT +
Preference number: 2 (lower is better)
Translates to: TLQKFLQTSQVRIPAKDFSGEGN*LASTII
Trigger: AATAATAGTTGATGCCAGGCAGTTGCCTTCTCCAGA...AAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR GCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCACTTGTACGCATAGACTaGAGACGCTGGGCAAGTTGG +
Preference number: 2 (lower is better)
Translates to: IISVTTHPYLIYSHKQISLVRID*RRWASW
Trigger: CCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAG...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCACACCGTGGTGGACCCTaGTTTGCAGAACACTCTGAT +
Preference number: 2 (lower is better)
Translates to: IISVTTHPYLIYSHKQISHRGGP*FAEHSD
Trigger: ATCAGAGTGTTCTGCAAACCAGGGTCCACCACGGTG...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTACATAGACATCATATGTaGCCTGAAAAGCCAAAATTA +
Preference number: 2 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLHRHHM*PEKPKL
Trigger: TAATTTTGGCTTTTCAGGCCACATATGATGTCTATG...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp GTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCATTTCCCTTTCAAGTGTaGCACGAGTTTCAAAACTAC +
Preference number: 2 (lower is better)
Translates to: VLHGCFVSTKQSNINSRAFPFQV*HEFQNY
Trigger: GTAGTTTTGAAACTCGTGCCACACTTGAAAGGGAAA...TGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCACTGCTGACTTGCGACTaGATGGCTTCAACTCAGGTG +
Preference number: 2 (lower is better)
Translates to: IISVTTHPYLIYSHKQISLLTCD*MASTQV
Trigger: CACCTGAGTTGAAGCCATCCAGTCGCAAGTCAGCAG...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp TGGCTTCTAGAAAACCTTAATTCTTGCACCAGAGGATTTGATAAGAGCCATCTGACTCAGACTGTTACATaGTTCTGCTGCACAGACTTC +
Preference number: 2 (lower is better)
Translates to: WLLENLNSCTRGFDKSHLTQTVT*FCCTDF
Trigger: GAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGT...CAGATGGCTCTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTCTAGAAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
3UTR-3UTR CCA 90 bp CAGTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTTTACAGCATTCAAGTTaGGATCAGCACGTCCCCTTA +
Preference number: 2 (lower is better)
Translates to: QLRSKIHVFHTLSYACFSLQHSS*DQHVPL
Trigger: TAAGGGGACGTGCTGATCCCAACTTGAATGCTGTAA...AGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR CAA 90 bp AGTTGGTATGCTTCTACTGCATCTTTTCTGTCTCTGATTCGTACTTaGTCAACTGTTTGTGGCCTATTATACACAGCCTGTTCACATCCA +
Preference number: 2 (lower is better)
Translates to: SWYASTASFLSLIRT*STVCGLLYTACSHP
Trigger: TGGATGTGAACAGGCTGTGTATAATAGGCCACAAACAGTTGACAAAGTACGAATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR TCA 90 bp TCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTATCCAGTTCAGGGAAGAAATaGCTTAGAGACATAGTCCAA +
Preference number: 2 (lower is better)
Translates to: SKSFCKQVRSESRRKILSSSGKK*LRDIVQ
Trigger: TTGGACTATGTCTCTAAGTCATTTCTTCCCTGAACT...GGATAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp CACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTAAGTTCAGGGAAGAAATaGCTTAGAGACATAGTCCAA +
Preference number: 2 (lower is better)
Translates to: HSKSFCKQVRSESRRKILSSGKK*LRDIVQ
Trigger: TTGGACTATGTCTCTAAGTCATTTCTTCCCTGAACT...TAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp GTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCAGATTCAGAAAGCATATaGAACTGGGCTGAATATGTA +
Preference number: 2 (lower is better)
Translates to: VLHGCFVSTKQSNINSRADSESI*NWAEYV
Trigger: TACATATTCAGCCCAGTTTCATATGCTTTCTGAATC...TGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp GTAAACATTATTAAAGGCAGGTGTTCCTTTGAGACTCTGCCTCCTGAACTTCCTCCAGGTTATGTGTTTTaGTTAAGGTCACACAGCAAA +
Preference number: 2 (lower is better)
Translates to: VNIIKGRCSFETLPPELPPGYVF*LRSHSK
Trigger: TTTGCTGTGTGACCTTAATCAAAACACATAACCTGG...AGGAAGTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTTTAATAATGTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp CACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTACCAGGTTATGTGTTTTaGTTAAGGTCACACAGCAAA +
Preference number: 2 (lower is better)
Translates to: HSKSFCKQVRSESRRKILPGYVF*LRSHSK
Trigger: TTTGCTGTGTGACCTTAATCAAAACACATAACCTGG...TAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000665648.1
3UTR-3UTR TCA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGAAGACAGAATCAGGATaGAGACACCTGCATGTCTTT +
Preference number: 2 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQKTESG*RHLHVF
Trigger: AAAGACATGCAGGTGTCTTCATCCTGATTCTGTCTT...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGTGGGGGAATAGCACATaGAGCCATTTAAGAAAAGGT +
Preference number: 2 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQWGNST*SHLRKG
Trigger: ACCTTTTCTTAAATGGCTTCATGTGCTATTCCCCCA...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATAATACTAATCCCCACTaGGGTTCTTCTAACATCTGC +
Preference number: 2 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNNTNPH*GSSNIC
Trigger: GCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATT...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp ATACTAAGCCATAAAATTCAGGCCCTTGATTTACTGGTGAGGAGCATGGGGTCCACTGTTTATCCTAAGTaGACACAGAGAAATGGAAAA +
Preference number: 2 (lower is better)
Translates to: ILSHKIQALDLLVRSMGSTVYPK*TQRNGK
Trigger: TTTTCCATTTCTCTGTGTGCACTTAGGATAAACAGT...GGACCCCATGCTCCTCACCAGTAAATCAAGGGCCTGAATTTTATGGCTTAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCATGTTGGGTTGAGAGCTaGAGAGGTTCTGACTGTGCT +
Preference number: 2 (lower is better)
Translates to: IISVTTHPYLIYSHKQISCWVES*RGSDCA
Trigger: AGCACAGTCAGAACCTCTGCAGCTCTCAACCCAACA...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp ACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTGTTACATGGTTCTGCTaGACAGACTTCAACTACTTT +
Preference number: 2 (lower is better)
Translates to: TLQKFLQTSQVRIPAKDFVTWFC*TDFNYF
Trigger: AAAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAAC...AAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGACTGTTACATGGTTCTaGTGCACAGACTTCAACTAC +
Preference number: 2 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQTVTWF*CTDFNY
Trigger: GTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGT...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665648.1
3UTR-3UTR GCA 90 bp CAGTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTAGCAATTGGTCACTTTaGTCAGAGTCTTCCTCATAC +
Preference number: 2 (lower is better)
Translates to: QLRSKIHVFHTLSYACFSSNWSL*SESSSY
Trigger: GTATGAGGAAGACTCTGAGCAAAGTGACCAATTGCT...AGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
3UTR-3UTR CCA 90 bp ATACTAAGCCATAAAATTCAGGCCCTTGATTTACTGGTGAGGAGCATGGGGTCCTCTCAGCAGAATATATaGAAAGAATGGAAGTGCTTT +
Preference number: 2 (lower is better)
Translates to: ILSHKIQALDLLVRSMGSSQQNI*KEWKCF
Trigger: AAAGCACTTCCATTCTTTCCATATATTCTGCTGAGA...GGACCCCATGCTCCTCACCAGTAAATCAAGGGCCTGAATTTTATGGCTTAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGTCTCAGCAGAATATATaGAAAGAATGGAAGTGCTTT +
Preference number: 2 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKSQQNI*KEWKCF
Trigger: AAAGCACTTCCATTCTTTCCATATATTCTGCTGAGA...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTCATAGACATCATATGTaGCCTGAAAAGCCAAAATTA +
Preference number: 2 (lower is better)
Translates to: ISTENSINCCLLTCDWMAHRHHM*PEKPKL
Trigger: TAATTTTGGCTTTTCAGGCCACATATGATGTCTATG...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp GTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCAGAGATCCTCGCAATATaGCTTAGATTAGCAAATATG +
Preference number: 2 (lower is better)
Translates to: VLHGCFVSTKQSNINSRAEILAI*LRLANM
Trigger: CATATTTGCTAATCTAAGCCATATTGCGAGGATCTC...TGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp GTAAACATTATTAAAGGCAGGTGTTCCTTTGAGACTCTGCCTCCTGAACTTCCTGAGTTTTCGTTAGGTTaGGAAGGAAGTAAGTTCAAG +
Preference number: 2 (lower is better)
Translates to: VNIIKGRCSFETLPPELPEFSLG*EGSKFK
Trigger: CTTGAACTTACTTCCTTCCCAACCTAACGAAAACTC...AGGAAGTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTTTAATAATGTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTGCACAAGGTATCCCATaGCTTCTAGAAAACCTTAAT +
Preference number: 2 (lower is better)
Translates to: YTPKVSANKSGQNPGERFAQGIP*LLENLN
Trigger: ATTAAGGTTTTCTAGAAGCCATGGGATACCTTGTGC...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
3UTR-3UTR CCA 90 bp ACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTGCACAAGGTATCCCATaGCTTCTAGAAAACCTTAAT +
Preference number: 2 (lower is better)
Translates to: TLQKFLQTSQVRIPAKDFAQGIP*LLENLN
Trigger: ATTAAGGTTTTCTAGAAGCCATGGGATACCTTGTGC...AAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
3UTR-3UTR CCA 90 bp TTCTCCAAAAACTTAAGAAGAGTGACACACTATAGTACACGGGGTATTAAGCAAATGGGGACGCTGCTATaGGAGAGCCTGTATTTTTCT +
Preference number: 2 (lower is better)
Translates to: FSKNLRRVTHYSTRGIKQMGTLL*ESLYFS
Trigger: AGAAAAATACAGGCTCTCCCATAGCAGCGTCCCCAT...TTGCTTAATACCCCGTGTACTATAGTGTGTCACTCTTCTTAAGTTTTTGGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR TCA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATAAGTTCAGGGAAGAAATaGCTTAGAGACATAGTCCAA +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHKEECLIDIISSGKK*LRDIVQ
Trigger: TTGGACTATGTCTCTAAGTCATTTCTTCCCTGAACT...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp CACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTACTGAATTTCAATAAATaGGGCAGCATTGACTGCTTA +
Preference number: 2 (lower is better)
Translates to: HSKSFCKQVRSESRRKILLNFNK*GSIDCL
Trigger: TAAGCAGTCAATGCTGCCTCATTTATTGAAATTCAG...TAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665648.1
3UTR-3UTR TCA 90 bp TATAAACCATCAACAGTAGAGTTTCATAGTTCAGGTTCCCAGACAGACTCTGATGTGACCTGCTGCCATTaGATGTTTCAATCTTGTTGT +
Preference number: 2 (lower is better)
Translates to: YKPSTVEFHSSGSQTDSDVTCCH*MFQSCC
Trigger: ACAACAAGATTGAAACATTCAATGGCAGCAGGTCAC...ATCAGAGTCTGTCTGGGAACCTGAACTATGAAACTCTACTGTTGATGGTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR GCA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGAAAGGAATCAATCACTaGCTTTCACAGAATCACGCA +
Preference number: 2 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQKGINH*LSQNHA
Trigger: TGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTTT...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp TTCTCCAAAAACTTAAGAAGAGTGACACACTATAGTACACGGGGTATTAAGCAACATCCCAATGAACTTTaGACCTCCTCTGGAGAAGTA +
Preference number: 2 (lower is better)
Translates to: FSKNLRRVTHYSTRGIKQHPNEL*TSSGEV
Trigger: TACTTCTCCAGAGGAGGTGCAAAGTTCATTGGGATG...TTGCTTAATACCCCGTGTACTATAGTGTGTCACTCTTCTTAAGTTTTTGGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR GCA 90 bp GTAGTCCTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTGAAAACCTTAATTCTTaGACCAGAGGATTTGATAAG +
Preference number: 2 (lower is better)
Translates to: VVLYSDCYMVLLHRLQLLENLNS*TRGFDK
Trigger: CTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTC...AAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAGGACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
3UTR-3UTR GCA 90 bp TATAAACCATCAACAGTAGAGTTTCATAGTTCAGGTTCCCAGACAGACTCTGATAATTTTCTGGAGAACTaGTTTGTAGGGCCCCTTCAT +
Preference number: 2 (lower is better)
Translates to: YKPSTVEFHSSGSQTDSDNFLEN*FVGPLH
Trigger: ATGAAGGGGCCCTACAAAGCAGTTCTCCAGAAAATT...ATCAGAGTCTGTCTGGGAACCTGAACTATGAAACTCTACTGTTGATGGTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CCA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGTTGTCATGCCTCTCCTaGTCTCCTGTTAGATTTATT +
Preference number: 2 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQLSCLS*SPVRFI
Trigger: AATAAATCTAACAGGAGACCAGGAGAGGCATGACAA...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp GTAAACATTATTAAAGGCAGGTGTTCCTTTGAGACTCTGCCTCCTGAACTTCCTCAATGTGGGTACCTGTaGTTGCAAAATTGTTTTAAG +
Preference number: 2 (lower is better)
Translates to: VNIIKGRCSFETLPPELPQCGYL*LQNCFK
Trigger: CTTAAAACAATTTTGCAACCACAGGTACCCACATTG...AGGAAGTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTTTAATAATGTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp TTCTCCAAAAACTTAAGAAGAGTGACACACTATAGTACACGGGGTATTAAGCAAACTCAGACTGTTACATaGTTCTGCTGCACAGACTTC +
Preference number: 2 (lower is better)
Translates to: FSKNLRRVTHYSTRGIKQTQTVT*FCCTDF
Trigger: GAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGT...TTGCTTAATACCCCGTGTACTATAGTGTGTCACTCTTCTTAAGTTTTTGGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CCA 90 bp TCTATTTCAGTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTTGCTCAGAACTCAGACTGTTACATaGTTCTGCTGCACAGACTTC +
Preference number: 2 (lower is better)
Translates to: SISVKNSSAIKQLVTLLRTQTVT*FCCTDF
Trigger: GAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGT...TCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGACTGAAATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp TTCTCCAAAAACTTAAGAAGAGTGACACACTATAGTACACGGGGTATTAAGCAAGAAAGATTTTATCCATaGGGACGCTGCTATGGGAGA +
Preference number: 2 (lower is better)
Translates to: FSKNLRRVTHYSTRGIKQERFYP*GRCYGR
Trigger: TCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTC...TTGCTTAATACCCCGTGTACTATAGTGTGTCACTCTTCTTAAGTTTTTGGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CCA 90 bp GGCAACGCATCAAGAAGATACATTACTAAGAGGGTTAAGATATTAATAGAGGGTACAGTAAGAATCATCTaGTGGTCATTTCTGGCAGCC +
Preference number: 2 (lower is better)
Translates to: GNASRRYITKRVKILIEGTVRII*WSFLAA
Trigger: GGCTGCCAGAAATGACCACCAGATGATTCTTACTGT...ACCCTCTATTAATATCTTAACCCTCTTAGTAATGTATCTTCTTGATGCGTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR CAA 90 bp TTCTACTGCATCTTTTCTGTCTCTGATTCGTACTTTGTCAACTGTTaGTGGCCTATTATACACAGCCTGTTCACATCCAAAATTGATTGC +
Preference number: 2 (lower is better)
Translates to: FYCIFSVSDSYFVNC*WPIIHSLFTSKIDC
Trigger: GCAATCAATTTTGGATGTGAACAGGCTGTGTATAATAGGCCACAAACAGTTGACAAAGTACGAATCAGAGACAGAAAAGATGCAGTAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR GCA 90 bp ATCTTGTCTTTTCAAATACTAATCCCCACTGAGGTTCTTCTAACATCTGCTGTAAAGATTTTCTTGTCATaGCTCTCCTGGTCTCCTGTT +
Preference number: 2 (lower is better)
Translates to: ILSFQILIPTEVLLTSAVKIFLS*LSWSPV
Trigger: AACAGGAGACCAGGAGAGGCATGACAAGAAAATCTT...TACAGCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATTTGAAAAGACAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCAGTTCCTTTGAGACTCTaGCTCCTGAACTTCCTGTAT +
Preference number: 2 (lower is better)
Translates to: IISVTTHPYLIYSHKQISVPLRL*LLNFLY
Trigger: ATACAGGAAGTTCAGGAGGCAGAGTCTCAAAGGAAC...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp ATTGGCTTAAATGCAGATCATAATTCTGAGTTTTGGTGTCATTTGAAGATGACGCATCCCAATGAACTTTaGACCTCCTCTGGAGAAGTA +
Preference number: 2 (lower is better)
Translates to: IGLNADHNSEFWCHLKMTHPNEL*TSSGEV
Trigger: TACTTCTCCAGAGGAGGTGCAAAGTTCATTGGGATG...CGTCATCTTCAAATGACACCAAAACTCAGAATTATGATCTGCATTTAAGCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665648.1
3UTR-3UTR CCA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTCTCAGCAGAATATATaGAAAGAATGGAAGTGCTTT +
Preference number: 2 (lower is better)
Translates to: YTPKVSANKSGQNPGERFSQQNI*KEWKCF
Trigger: AAAGCACTTCCATTCTTTCCATATATTCTGCTGAGA...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR CAA 90 bp TCTATTTCAGTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTaGCTCAGAGTCTTCCTCATACACTCCAAAAGTTTCTGCAAACAA +
Preference number: 2 (lower is better)
Translates to: SISVKNSSAIKQLVT*LRVFLIHSKSFCKQ
Trigger: TTGTTTGCAGAAACTTTTGGAGTGTATGAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGACTGAAATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp ATTATTTCGATTATAGGGACTAACAATCATCCCAATGAACTTTGCACCTCCTCTAGTTCAGGGAAGAAATaGCTTAGAGACATAGTCCAA +
Preference number: 2 (lower is better)
Translates to: IISIIGTNNHPNELCTSSSSGKK*LRDIVQ
Trigger: TTGGACTATGTCTCTAAGTCATTTCTTCCCTGAACT...AGAGGAGGTGCAAAGTTCATTGGGATGATTGTTAGTCCCTATAATCGAAATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp ATCTTGTCTTTTCAAATACTAATCCCCACTGAGGTTCTTCTAACATCTGCTGTAGTTACATGGTTCTGCTaGACAGACTTCAACTACTTT +
Preference number: 2 (lower is better)
Translates to: ILSFQILIPTEVLLTSAVVTWFC*TDFNYF
Trigger: AAAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAAC...TACAGCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATTTGAAAAGACAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp TCCTATCAATTCGAGGTATGTATGAATCCGTCCAATACAATTAACATCTCCACACACTCCAAAAGTTTCTaGAAACAAGTCAGGTCAGAA +
Preference number: 2 (lower is better)
Translates to: SYQFEVCMNPSNTINISTHSKSF*KQVRSE
Trigger: TTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTG...TGTGGAGATGTTAATTGTATTGGACGGATTCATACATACCTCGAATTGATAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR GCA 90 bp ATTAGGATCAAAAGCAGGATGAGAATGATACCATCCAATAACACTGAAGCCTCTATTCCCCTTCCATCATaGTTGTTGCAGTTTTTAATC +
Preference number: 2 (lower is better)
Translates to: IRIKSRMRMIPSNNTEASIPLPS*LLQFLI
Trigger: GATTAAAAACTGCAACAAGCATGATGGAAGGGGAAT...AGAGGCTTCAGTGTTATTGGATGGTATCATTCTCATCCTGCTTTTGATCCTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR GCA 90 bp CAGTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTACATCCAAAATTGATTaGTCCTATCAATTCGAGGTA +
Preference number: 2 (lower is better)
Translates to: QLRSKIHVFHTLSYACFSTSKID*SYQFEV
Trigger: TACCTCGAATTGATAGGAGCAATCAATTTTGGATGT...AGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CCA 90 bp ATCTTGTCTTTTCAAATACTAATCCCCACTGAGGTTCTTCTAACATCTGCTGTATTGTCATGCCTCTCCTaGTCTCCTGTTAGATTTATT +
Preference number: 2 (lower is better)
Translates to: ILSFQILIPTEVLLTSAVLSCLS*SPVRFI
Trigger: AATAAATCTAACAGGAGACCAGGAGAGGCATGACAA...TACAGCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATTTGAAAAGACAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp TTCTCCAAAAACTTAAGAAGAGTGACACACTATAGTACACGGGGTATTAAGCAATCTTCATTTTTAACTTaGAGATTATGGCCGGTCTTC +
Preference number: 2 (lower is better)
Translates to: FSKNLRRVTHYSTRGIKQSSFLT*RLWPVF
Trigger: GAAGACCGGCCATAATCTTCAAGTTAAAAATGAAGA...TTGCTTAATACCCCGTGTACTATAGTGTGTCACTCTTCTTAAGTTTTTGGAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR GCA 90 bp ATTGGCTTAAATGCAGATCATAATTCTGAGTTTTGGTGTCATTTGAAGATGACGCTAAAGCTGACTCACTaGTTCTTCCAATACTCCTTA +
Preference number: 2 (lower is better)
Translates to: IGLNADHNSEFWCHLKMTLKLTH*FFQYSL
Trigger: TAAGGAGTATTGGAAGAAGCAGTGAGTCAGCTTTAG...CGTCATCTTCAAATGACACCAAAACTCAGAATTATGATCTGCATTTAAGCCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ATTAGGATCAAAAGCAGGATGAGAATGATACCATCCAATAACACTGAAGCCTCTTCTCAGCAGAATATATaGAAAGAATGGAAGTGCTTT +
Preference number: 2 (lower is better)
Translates to: IRIKSRMRMIPSNNTEASSQQNI*KEWKCF
Trigger: AAAGCACTTCCATTCTTTCCATATATTCTGCTGAGA...AGAGGCTTCAGTGTTATTGGATGGTATCATTCTCATCCTGCTTTTGATCCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCATTACAAGGTATCAGTTaGAAGGGATCAAACGAGCTT +
Preference number: 2 (lower is better)
Translates to: IISVTTHPYLIYSHKQISLQGIS*KGSNEL
Trigger: AAGCTCGTTTGATCCCTTCCAACTGATACCTTGTAA...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCATTTAGGCTAGCAAAGTaGCAGGACACAGATGTTAAA +
Preference number: 2 (lower is better)
Translates to: IISVTTHPYLIYSHKQISFRLAK*QDTDVK
Trigger: TTTAACATCTGTGTCCTGCCACTTTGCTAGCCTAAA...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR CAA 90 bp AACAAATTTTCTATTTCAGTCAAGAATTCTTCAGCCATAAAGCAATaGGTCACTTTGCTCAGAGTCTTCCTCATACACTCCAAAAGTTTC +
Preference number: 2 (lower is better)
Translates to: NKFSISVKNSSAIKQ*VTLLRVFLIHSKSF
Trigger: GAAACTTTTGGAGTGTATGAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGACTGAAATAGAAAATTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR TCA 90 bp ATTGGCTTAAATGCAGATCATAATTCTGAGTTTTGGTGTCATTTGAAGATGACGCTGAATTTCAATAAATaGGGCAGCATTGACTGCTTA +
Preference number: 2 (lower is better)
Translates to: IGLNADHNSEFWCHLKMTLNFNK*GSIDCL
Trigger: TAAGCAGTCAATGCTGCCTCATTTATTGAAATTCAG...CGTCATCTTCAAATGACACCAAAACTCAGAATTATGATCTGCATTTAAGCCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR GCA 90 bp ATCTTGTCTTTTCAAATACTAATCCCCACTGAGGTTCTTCTAACATCTGCTGTAGAAAACCTTAATTCTTaGACCAGAGGATTTGATAAG +
Preference number: 2 (lower is better)
Translates to: ILSFQILIPTEVLLTSAVENLNS*TRGFDK
Trigger: CTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTC...TACAGCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATTTGAAAAGACAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
3UTR-3UTR GCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCATTGGTATGCTTCTACTaGATCTTTTCTGTCTCTGAT +
Preference number: 2 (lower is better)
Translates to: IISVTTHPYLIYSHKQISLVCFY*IFSVSD
Trigger: ATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAA...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCATCATGGAAACATGCATaGTCTGTCCATCTCTATTTT +
Preference number: 2 (lower is better)
Translates to: IISVTTHPYLIYSHKQISSWKHA*SVHLYF
Trigger: AAAATAGAGATGGACAGACCATGCATGTTTCCATGA...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ATTGGCTTAAATGCAGATCATAATTCTGAGTTTTGGTGTCATTTGAAGATGACGTCTCAGCAGAATATATaGAAAGAATGGAAGTGCTTT +
Preference number: 2 (lower is better)
Translates to: IGLNADHNSEFWCHLKMTSQQNI*KEWKCF
Trigger: AAAGCACTTCCATTCTTTCCATATATTCTGCTGAGA...CGTCATCTTCAAATGACACCAAAACTCAGAATTATGATCTGCATTTAAGCCAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCACATAGACATCATATGTaGCCTGAAAAGCCAAAATTA +
Preference number: 2 (lower is better)
Translates to: IISVTTHPYLIYSHKQISHRHHM*PEKPKL
Trigger: TAATTTTGGCTTTTCAGGCCACATATGATGTCTATG...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659812.1
ENST00000665648.1
3UTR TCA 72 bp CATTCACTGGTGGCAAGGGCTGCTTGCTTGGCTTCCTaGTCCCTGGGTGGTCAGAGCCACAGCTTCCCAGTG +
Preference number: 3 (lower is better)
Translates to: HSLVARAACLAS*SLGGQSHSFPV
Trigger: CACTGGGAAGCTGTGGCTCTGACCACCCAGGGATCAGGAAGCCAAGCAAGCAGCCCTTGCCACCAGTGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR CCA 72 bp TGGTGGCAAGGGCTGCTTGCTTGGCTTCCTGATCCCTaGGTGGTCAGAGCCACAGCTTCCCAGTGTTCAGAG +
Preference number: 3 (lower is better)
Translates to: WWQGLLAWLPDP*VVRATASQCSE
Trigger: CTCTGAACACTGGGAAGCTGTGGCTCTGACCACCCAGGGATCAGGAAGCCAAGCAAGCAGCCCTTGCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR GCA 72 bp CTTTGTAGGGCCCCTTCATTCACTGGTGGCAAGGGCTaGTTGCTTGGCTTCCTGATCCCTGGGTGGTCAGAG +
Preference number: 3 (lower is better)
Translates to: LCRAPSFTGGKG*LLGFLIPGWSE
Trigger: CTCTGACCACCCAGGGATCAGGAAGCCAAGCAAGCAGCCCTTGCCACCAGTGAATGAAGGGGCCCTACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR GCA 72 bp TTGAGAGCTGCAGAGGTTCTGACTGTGCTTACAGTCTaGATGTCACAGACCTCAACCCCACTCCTAGGGGCA +
Preference number: 3 (lower is better)
Translates to: LRAAEVLTVLTV*MSQTSTPLLGA
Trigger: TGCCCCTAGGAGTGGGGTTGAGGTCTGTGACATGCAGACTGTAAGCACAGTCAGAACCTCTGCAGCTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR CCA 72 bp TGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTaGCATGTTGAAGCCACAGTCTCCTCTGTTGGGTTG +
Preference number: 3 (lower is better)
Translates to: WEEGNAEETCSG*HVEATVSSVGL
Trigger: CAACCCAACAGAGGAGACTGTGGCTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp ACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGGAGGAGCTCAGGTTGGCATGTaGAAGCCACAGTCTCCTCTG +
Preference number: 3 (lower is better)
Translates to: TIGSSSSPHQDPGREMGGAQVGM*KPQSPL
Trigger: CAGAGGAGACTGTGGCTTCAACATGCCAACCTGAGC...TCCTCCCATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR TCA 72 bp GTGAGGGAGGCAGGATTGTTTGGACACAGGAAAAGCTaGACAGAGGCCATCGCCAATCCCATGAGCATCTCT +
Preference number: 3 (lower is better)
Translates to: VREAGLFGHRKS*TEAIANPMSIS
Trigger: AGAGATGCTCATGGGATTGGCGATGGCCTCTGTTCAGCTTTTCCTGTGTCCAAACAATCCTGCCTCCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CAA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCACAAGGCCCCAAACTCTaGACAAGTATCATCCTTGAG +
Preference number: 3 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPQGPKL*TSIILE
Trigger: CTCAAGGATGATACTTGTCAAGAGTTTGGGGCCTTG...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp ACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGGAGGAGTAAAGCCGACCAGGTaGCTTAGTTTCACAGCCTAC +
Preference number: 3 (lower is better)
Translates to: TIGSSSSPHQDPGREMGGVKPTR*LSFTAY
Trigger: GTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTAC...TCCTCCCATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTGTCTCCTCTGTTGGGTaGAGAGCTGCAGAGGTTCTG +
Preference number: 3 (lower is better)
Translates to: TENSINCCLLTCDWMASTVSSVG*RAAEVL
Trigger: CAGAACCTCTGCAGCTCTCAACCCAACAGAGGAGAC...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCGGCCGGTCTTCTGATTaGGTGTTTCTTTATCCAGAC +
Preference number: 3 (lower is better)
Translates to: RSESRRKILSMGTLLWESGRSSD*VFLYPD
Trigger: GTCTGGATAAAGAAACACCAAATCAGAAGACCGGCC...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR GCA 72 bp AAGTGGCAGGACACAGATGTTAAAACCCAGCAGGTTTaGCTCACTTCTGAGCCCAAACTCATTCCACCTCCC +
Preference number: 3 (lower is better)
Translates to: KWQDTDVKTQQV*LTSEPKLIPPP
Trigger: GGGAGGTGGAATGAGTTTGGGCTCAGAAGTGAGGCAAACCTGCTGGGTTTTAACATCTGTGTCCTGCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR TCA 72 bp AGCACAAAACAGAGCAACATCAATTCCAGGGCATCCTaGCTATTGGTTCCTCCAGCTCACCTCATCAGGACC +
Preference number: 3 (lower is better)
Translates to: STKQSNINSRAS*LLVPPAHLIRT
Trigger: GGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGATGCCCTGGAATTGATGTTGCTCTGTTTTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR CCA 72 bp ACCCTACGTCTCCTTGTACGCATAGACTGCAGACGCTaGGCAAGTTGGTATGCTTCTACTGCATCTTTTCTG +
Preference number: 3 (lower is better)
Translates to: TLRLLVRIDCRR*ASWYASTASFL
Trigger: CAGAAAAGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAGGAGACGTAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CAA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTAGTGGTGGACCCTGGTTaGCAGAACACTCTGATAATC +
Preference number: 3 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLVVDPG*QNTLII
Trigger: GATTATCAGAGTGTTCTGCAAACCAGGGTCCACCAC...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTAGTAAAGCCGACCAGGTaGCTTAGTTTCACAGCCTAC +
Preference number: 3 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLVKPTR*LSFTAY
Trigger: GTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTAC...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR CCA 72 bp GAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTaGATGGCTTCAACTCAGGTGCTCATGTGTTACATG +
Preference number: 3 (lower is better)
Translates to: ENSINCCLLTCD*MASTQVLMCYM
Trigger: CATGTAACACATGAGCACCTGAGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR CCA 72 bp TCTAGTTCCCTCAGTTGGACAGTAAGAATCATCTGGTaGTCATTTCTGGCAGCCTTGAGTAGAACCCAGAGC +
Preference number: 3 (lower is better)
Translates to: SSSLSWTVRIIW*SFLAALSRTQS
Trigger: GCTCTGGGTTCTACTCAAGGCTGCCAGAAATGACCACCAGATGATTCTTACTGTCCAACTGAGGGAACTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR CCA 72 bp GGTTCTAGTTCCCTCAGTTGGACAGTAAGAATCATCTaGTGGTCATTTCTGGCAGCCTTGAGTAGAACCCAG +
Preference number: 3 (lower is better)
Translates to: GSSSLSWTVRII*WSFLAALSRTQ
Trigger: CTGGGTTCTACTCAAGGCTGCCAGAAATGACCACCAGATGATTCTTACTGTCCAACTGAGGGAACTAGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CAA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTCAAGGCCCCAAACTCTaGACAAGTATCATCCTTGAG +
Preference number: 3 (lower is better)
Translates to: TENSINCCLLTCDWMASTQGPKL*TSIILE
Trigger: CTCAAGGATGATACTTGTCAAGAGTTTGGGGCCTTG...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp GTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCAAAGGCAGGTGTTCCTTaGAGACTCTGCCTCCTGAAC +
Preference number: 3 (lower is better)
Translates to: VLHGCFVSTKQSNINSRAKAGVP*RLCLLN
Trigger: GTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTT...TGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp AGAAATGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTGGCATGTTGAAGTCTCTAGATCAAGGGTaGGAGAATAATAGCCAACAG +
Preference number: 3 (lower is better)
Translates to: RNGRKVMQRRPAQVGMLKSLDQG*ENNSQQ
Trigger: CTGTTGGCTATTATTCTCCAACCCTTGATCTAGAGA...CTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGCTGCTGTCTGCTGACTaGCGACTGGATGGCTTCAAC +
Preference number: 3 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQLLSAD*RLDGFN
Trigger: GTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAG...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp CTGAACACAACAGTAAAGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTTTTACAGCATTCAAGTaGGGATCAGCACGTCCCCTT +
Preference number: 3 (lower is better)
Translates to: LNTTVKPTRLLSFTAYSIFTAFK*GSARPL
Trigger: AAGGGGACGTGCTGATCCCAACTTGAATGCTGTAAA...AATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTACTGTTGTGTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CAA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTGTCCTTCTAAGTCCTTaGCATCACACCAGTTTCCCC +
Preference number: 3 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSVLLSP*HHTSFP
Trigger: GGGGAAACTGGTGTGATGCAAAGGACTTAGAAGGAC...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR TCA 72 bp GAATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTaGCTTGCGACTGGATGGCTTCAACTCAGGTGCTCA +
Preference number: 3 (lower is better)
Translates to: EFLLRIPSTAVC*LATGWLQLRCS
Trigger: TGAGCACCTGAGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR TCA 72 bp AGAGGGTTTCCAGGTAGGCTAGAGTGGAAATGCTCTTaGCAGAAGATAGAGCACGTACAACACACCAGTCTA +
Preference number: 3 (lower is better)
Translates to: RGFPGRLEWKCS*QKIEHVQHTSL
Trigger: TAGACTGGTGTGTTGTACGTGCTCTATCTTCTGTCAAGAGCATTTCCACTCTAGCCTACCTGGAAACCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR TCA 72 bp CTCTGGAGCTGGCATGTCTCTACTGAGTTGTCCTATTaGGGCAAGGACTCCAGGTATTTGTACTCCTATAGT +
Preference number: 3 (lower is better)
Translates to: LWSWHVSTELSY*GKDSRYLYSYS
Trigger: ACTATAGGAGTACAAATACCTGGAGTCCTTGCCTCAATAGGACAACTCAGTAGAGACATGCCAGCTCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR GCA 72 bp CCAGTGTTCAGAGGCAGCAGAAATAGTAGTGGTCACTaGAGCAGTGGTAAATTCTTAATTCTAGCAGGCCCT +
Preference number: 3 (lower is better)
Translates to: PVFRGSRNSSGH*SSGKFLILAGP
Trigger: AGGGCCTGCTAGAATTAAGAATTTACCACTGCTGCAGTGACCACTACTATTTCTGCTGCCTCTGAACACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR CCA 72 bp CTCCTTGTACGCATAGACTGCAGACGCTGGGCAAGTTaGTATGCTTCTACTGCATCTTTTCTGTCTCTGATT +
Preference number: 3 (lower is better)
Translates to: LLVRIDCRRWAS*YASTASFLSLI
Trigger: AATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR CCA 72 bp AAGGTTAACCTGCTCATGATCAGATATAAAAGGCATTaGCAGGATTTGAACCCAGGCAGTCAGGCTCGAGAG +
Preference number: 3 (lower is better)
Translates to: KVNLLMIRYKRH*QDLNPGSQARE
Trigger: CTCTCGAGCCTGACTGCCTGGGTTCAAATCCTGCCAATGCCTTTTATATCTGATCATGAGCAGGTTAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CAA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTGTGGTGGACCCTGGTTaGCAGAACACTCTGATAATC +
Preference number: 3 (lower is better)
Translates to: YTPKVSANKSGQNPGERFVVDPG*QNTLII
Trigger: GATTATCAGAGTGTTCTGCAAACCAGGGTCCACCAC...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp ACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTGTAAAGCCGACCAGGTaGCTTAGTTTCACAGCCTAC +
Preference number: 3 (lower is better)
Translates to: TLQKFLQTSQVRIPAKDFVKPTR*LSFTAY
Trigger: GTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTAC...AAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp TCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTATCCGTAAAGCCGACCAGGTaGCTTAGTTTCACAGCCTAC +
Preference number: 3 (lower is better)
Translates to: SKSFCKQVRSESRRKILSVKPTR*LSFTAY
Trigger: GTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTAC...GGATAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGTTTTTAAGATTTTCTaGTCATGCCTCTCCTGGTCT +
Preference number: 3 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMVFKIF*SCLSWS
Trigger: AGACCAGGAGAGGCATGACAAGAAAATCTTAAAAAC...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGTCAGCCATAAAGCAATaGGTCACTTTGCTCAGAGTC +
Preference number: 3 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKSAIKQ*VTLLRV
Trigger: GACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGA...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665648.1
3UTR-3UTR CAA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTATGGTGTCCATGCCTTaGTCCCTTTATCTTCATTTT +
Preference number: 3 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSMVSMP*SLYLHF
Trigger: AAAATGAAGATAAAGGGACAAAGGCATGGACACCAT...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR GCA 72 bp TGGTCATTTCTGGCAGCCTTGAGTAGAACCCAGAGCTaGACCCCTTTCCAACAGTTTTATAAGCATCCAATT +
Preference number: 3 (lower is better)
Translates to: WSFLAALSRTQS*TPFQQFYKHPI
Trigger: AATTGGATGCTTATAAAACTGTTGGAAAGGGGTGCAGCTCTGGGTTCTACTCAAGGCTGCCAGAAATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR GCA 72 bp AGACTGCAGACGCTGGGCAAGTTGGTATGCTTCTACTaGATCTTTTCTGTCTCTGATTCGTACTTTGTCAAC +
Preference number: 3 (lower is better)
Translates to: RLQTLGKLVCFY*IFSVSDSYFVN
Trigger: GTTGACAAAGTACGAATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCTGCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR CCA 72 bp TCTGAATTTCACAAGGCTCTGGAGAAGGCAACTGCCTaGCATCAACTATTATTCCCCTTCCATCATGCTTGT +
Preference number: 3 (lower is better)
Translates to: SEFHKALEKATA*HQLLFPFHHAC
Trigger: ACAAGCATGATGGAAGGGGAATAATAGTTGATGCCAGGCAGTTGCCTTCTCCAGAGCCTTGTGAAATTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CAA 90 bp CAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTATCCATGTGGTGGACCCTGGTTaGCAGAACACTCTGATAATC +
Preference number: 3 (lower is better)
Translates to: QKFLQTSQVRIPAKDFIHVVDPG*QNTLII
Trigger: GATTATCAGAGTGTTCTGCAAACCAGGGTCCACCAC...ATGGATAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp TGTATGAATCCGTCCAATACAATTAACATCTCCACAGTTCTTCAGGCCAGGACGTCACAGCCTACAGCATaGCTCAGTAAAGGACTAGAA +
Preference number: 3 (lower is better)
Translates to: CMNPSNTINISTVLQARTSQPTA*LSKGLE
Trigger: TTCTAGTCCTTTACTGAGCAATGCTGTAGGCTGTGA...CGTCCTGGCCTGAAGAACTGTGGAGATGTTAATTGTATTGGACGGATTCATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CAA 90 bp CAGTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTGTAAAGCCGACCAGGTaGCTTAGTTTCACAGCCTAC +
Preference number: 3 (lower is better)
Translates to: QLRSKIHVFHTLSYACFSVKPTR*LSFTAY
Trigger: GTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTAC...AGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
3UTR-3UTR CAA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTGTTTTTAAGATTTTCTaGTCATGCCTCTCCTGGTCT +
Preference number: 3 (lower is better)
Translates to: TENSINCCLLTCDWMASTVFKIF*SCLSWS
Trigger: AGACCAGGAGAGGCATGACAAGAAAATCTTAAAAAC...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTAGTTTTTAAGATTTTCTaGTCATGCCTCTCCTGGTCT +
Preference number: 3 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLVFKIF*SCLSWS
Trigger: AGACCAGGAGAGGCATGACAAGAAAATCTTAAAAAC...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp GGAATGGTTAGAAAACTAACCATTTCAAGTCCCAGAATATCAGAGTTCTGCATGTCATTTCTGGCAGCCTaGAGTAGAACCCAGAGCTGC +
Preference number: 3 (lower is better)
Translates to: GMVRKLTISSPRISEFCMSFLAA*SRTQSC
Trigger: GCAGCTCTGGGTTCTACTCAAGGCTGCCAGAAATGA...CATGCAGAACTCTGATATTCTGGGACTTGAAATGGTTAGTTTTCTAACCATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CAA 90 bp TCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTATCCATTCTTCTGGGGTGTTaGAGAAGACAACTCGTCCAC +
Preference number: 3 (lower is better)
Translates to: SKSFCKQVRSESRRKILSILLGC*RRQLVH
Trigger: GTGGACGAGTTGTCTTCTCAAACACCCCAGAAGAAT...GGATAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR CCA 72 bp ACTGGATGGCTTCAACTCAGGTGCTCATGTGTTACATaGCTGTTTTGTGAGCACAAAACAGAGCAACATCAA +
Preference number: 3 (lower is better)
Translates to: TGWLQLRCSCVT*LFCEHKTEQHQ
Trigger: TTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGAGCACCTGAGTTGAAGCCATCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTCACAGCCTACAGCATaGCTCAGTAAAGGACTAGAA +
Preference number: 3 (lower is better)
Translates to: YTPKVSANKSGQNPGERFSQPTA*LSKGLE
Trigger: TTCTAGTCCTTTACTGAGCAATGCTGTAGGCTGTGA...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp GTAGTCCTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTAAGCAATTGGTCACTTaGCTCAGAGTCTTCCTCATA +
Preference number: 3 (lower is better)
Translates to: VVLYSDCYMVLLHRLQLLKQLVT*LRVFLI
Trigger: TATGAGGAAGACTCTGAGCAAAGTGACCAATTGCTT...AAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAGGACTAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp TATAAACCATCAACAGTAGAGTTTCATAGTTCAGGTTCCCAGACAGACTCTGATGGGAGGCAGGATTGTTaGGACACAGGAAAAGCTGAA +
Preference number: 3 (lower is better)
Translates to: YKPSTVEFHSSGSQTDSDGRQDC*DTGKAE
Trigger: TTCAGCTTTTCCTGTGTCCAAACAATCCTGCCTCCC...ATCAGAGTCTGTCTGGGAACCTGAACTATGAAACTCTACTGTTGATGGTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR TCA 72 bp ACGTACAACACACCAGTCTATGGAAAAGCATGTAGGTaGCCTGCTGCCATTGAATGTTTCAATCTTGTTGTC +
Preference number: 3 (lower is better)
Translates to: TYNTPVYGKACR*PAAIECFNLVV
Trigger: GACAACAAGATTGAAACATTCAATGGCAGCAGGTCACCTACATGCTTTTCCATAGACTGGTGTGTTGTACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR CCA 72 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTaGTTTGCAGAACACTCTGATAATCACTATATGAAA +
Preference number: 3 (lower is better)
Translates to: LLSKGLEHRGGP*FAEHSDNHYMK
Trigger: TTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR CCA 72 bp GGAAAGAAAGGTAGTAGGATGTTTCCCTTTCAAGTGTaGCACGAGTTTCAAAACTACAGATTAGGGACTGAC +
Preference number: 3 (lower is better)
Translates to: GKKGSRMFPFQV*HEFQNYRLGTD
Trigger: GTCAGTCCCTAATCTGTAGTTTTGAAACTCGTGCCACACTTGAAAGGGAAACATCCTACTACCTTTCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp CATGCCTCTCCTGGTCTCCTGTTAGATTTATTAATCAGTAGTTCTAAACCATATGTGGTGGACCCTGGTTaGCAGAACACTCTGATAATC +
Preference number: 3 (lower is better)
Translates to: HASPGLLLDLLISSSKPYVVDPG*QNTLII
Trigger: GATTATCAGAGTGTTCTGCAAACCAGGGTCCACCAC...ATATGGTTTAGAACTACTGATTAATAAATCTAACAGGAGACCAGGAGAGGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGTCACAGCCTACAGCATaGCTCAGTAAAGGACTAGAA +
Preference number: 3 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQSQPTA*LSKGLE
Trigger: TTCTAGTCCTTTACTGAGCAATGCTGTAGGCTGTGA...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATATCACAGCCTACAGCATaGCTCAGTAAAGGACTAGAA +
Preference number: 3 (lower is better)
Translates to: HTHTHTHTHKEECLIDIISQPTA*LSKGLE
Trigger: TTCTAGTCCTTTACTGAGCAATGCTGTAGGCTGTGA...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp TGGCTTCTAGAAAACCTTAATTCTTGCACCAGAGGATTTGATAAGAGCCATCTGTCACAGCCTACAGCATaGCTCAGTAAAGGACTAGAA +
Preference number: 3 (lower is better)
Translates to: WLLENLNSCTRGFDKSHLSQPTA*LSKGLE
Trigger: TTCTAGTCCTTTACTGAGCAATGCTGTAGGCTGTGA...CAGATGGCTCTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTCTAGAAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
3UTR-3UTR CAA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTGTTTTTAAGATTTTCTaGTCATGCCTCTCCTGGTCT +
Preference number: 3 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSVFKIF*SCLSWS
Trigger: AGACCAGGAGAGGCATGACAAGAAAATCTTAAAAAC...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp GTAAACATTATTAAAGGCAGGTGTTCCTTTGAGACTCTGCCTCCTGAACTTCCTTCTCTAGATCAAGGGTaGGAGAATAATAGCCAACAG +
Preference number: 3 (lower is better)
Translates to: VNIIKGRCSFETLPPELPSLDQG*ENNSQQ
Trigger: CTGTTGGCTATTATTCTCCAACCCTTGATCTAGAGA...AGGAAGTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTTTAATAATGTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp ATCTTGTCTTTTCAAATACTAATCCCCACTGAGGTTCTTCTAACATCTGCTGTACTTGCACCAGAGGATTaGATAAGAGCCATCTGGGCT +
Preference number: 3 (lower is better)
Translates to: ILSFQILIPTEVLLTSAVLAPED*IRAIWA
Trigger: AGCCCAGATGGCTCTTATCAAATCCTCTGGTGCAAG...TACAGCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATTTGAAAAGACAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
3UTR-3UTR CAA 90 bp CAGTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTTCAGCCATAAAGCAATaGGTCACTTTGCTCAGAGTC +
Preference number: 3 (lower is better)
Translates to: QLRSKIHVFHTLSYACFSSAIKQ*VTLLRV
Trigger: GACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGA...AGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
3UTR-3UTR CAA 90 bp TATAAACCATCAACAGTAGAGTTTCATAGTTCAGGTTCCCAGACAGACTCTGATAGAGCCCCCTGTCTGTaGTTATCTGATCTAAGACAC +
Preference number: 3 (lower is better)
Translates to: YKPSTVEFHSSGSQTDSDRAPCL*LSDLRH
Trigger: GTGTCTTAGATCAGATAACAACAGACAGGGGGCTCT...ATCAGAGTCTGTCTGGGAACCTGAACTATGAAACTCTACTGTTGATGGTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CAA 90 bp CACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTAATCTTGCTTTTCATTTaGAAGACAGCCCCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: HSKSFCKQVRSESRRKILILLFI*KTAPGR
Trigger: TCTTCCAGGGGCTGTCTTCAAAATGAAAAGCAAGAT...TAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CAA 90 bp CACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTATCTCTGATTCGTACTTaGTCAACTGTTTGTGGCCTA +
Preference number: 3 (lower is better)
Translates to: HSKSFCKQVRSESRRKILSLIRT*STVCGL
Trigger: TAGGCCACAAACAGTTGACAAAGTACGAATCAGAGA...TAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CAA 90 bp GTAGTCCTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTCAAACGAGCTTTTTGTaGGTCTTGGCACTTTTAAAG +
Preference number: 3 (lower is better)
Translates to: VVLYSDCYMVLLHRLQLLQTSFL*VLALLK
Trigger: CTTTAAAAGTGCCAAGACCAACAAAAAGCTCGTTTG...AAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAGGACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR TCA 72 bp TTTACATGGTTTCTATTTCCCACACTGAAACTTTGCTaGTATGATATCCAAATAAGAAGAGTGGCCGGGCGC +
Preference number: 3 (lower is better)
Translates to: FTWFLFPTLKLC*YDIQIRRVAGR
Trigger: GCGCCCGGCCACTCTTCTTATTTGGATATCATATCAGCAAAGTTTCAGTGTGGGAAATAGAAACCATGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR GCA 72 bp TTGAGACAAGAACCAGGTCACCTAAAGCTGACTCACTaGTTCTTCCAATACTCCTTATTCTTCATTGGCTAT +
Preference number: 3 (lower is better)
Translates to: LRQEPGHLKLTH*FFQYSLFFIGY
Trigger: ATAGCCAATGAAGAATAAGGAGTATTGGAAGAAGCAGTGAGTCAGCTTTAGGTGACCTGGTTCTTGTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR GCA 72 bp TCGATTATAGGGACTAACAATCATCCCAATGAACTTTaGACCTCCTCTGGAGAAGTAACTCTGGTATTTAGC +
Preference number: 3 (lower is better)
Translates to: SIIGTNNHPNEL*TSSGEVTLVFS
Trigger: GCTAAATACCAGAGTTACTTCTCCAGAGGAGGTGCAAAGTTCATTGGGATGATTGTTAGTCCCTATAATCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR CCA 72 bp GCAATATGGCTTAGATTAGCAAATATGGTTAAACATTaGCACACAGGGCAAGGAGACTCAGATTTGAGAGCA +
Preference number: 3 (lower is better)
Translates to: AIWLRLANMVKH*HTGQGDSDLRA
Trigger: TGCTCTCAAATCTGAGTCTCCTTGCCCTGTGTGCCAATGTTTAACCATATTTGCTAATCTAAGCCATATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCAGTGGTGGACCCTGGTTaGCAGAACACTCTGATAATC +
Preference number: 3 (lower is better)
Translates to: IISVTTHPYLIYSHKQISVVDPG*QNTLII
Trigger: GATTATCAGAGTGTTCTGCAAACCAGGGTCCACCAC...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp GTAAACATTATTAAAGGCAGGTGTTCCTTTGAGACTCTGCCTCCTGAACTTCCTTCCAGGTTATGTGTTTaGATTAAGGTCACACAGCAA +
Preference number: 3 (lower is better)
Translates to: VNIIKGRCSFETLPPELPSRLCV*IKVTQQ
Trigger: TTGCTGTGTGACCTTAATCAAAACACATAACCTGGA...AGGAAGTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTTTAATAATGTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp CAGTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTAAGCAATTGGTCACTTaGCTCAGAGTCTTCCTCATA +
Preference number: 3 (lower is better)
Translates to: QLRSKIHVFHTLSYACFSKQLVT*LRVFLI
Trigger: TATGAGGAAGACTCTGAGCAAAGTGACCAATTGCTT...AGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
3UTR-3UTR CAA 90 bp CAGTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTATTACAAGGTATCAGTaGGAAGGGATCAAACGAGCT +
Preference number: 3 (lower is better)
Translates to: QLRSKIHVFHTLSYACFSITRYQ*EGIKRA
Trigger: AGCTCGTTTGATCCCTTCCAACTGATACCTTGTAAT...AGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR CCA 72 bp TTCAAGTCCCAGAATATCAGAGTTCTGCATGCTGATTaGGTTCTGCCATTTAGATGTTCAGGAGATGTAAAA +
Preference number: 3 (lower is better)
Translates to: FKSQNIRVLHAD*VLPFRCSGDVK
Trigger: TTTTACATCTCCTGAACATCTAAATGGCAGAACCCAATCAGCATGCAGAACTCTGATATTCTGGGACTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CAA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGTGTGTGTGCTTTTCTTaGTGCTTGGATAAAAGAAGT +
Preference number: 3 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQCVCFS*CLDKRS
Trigger: ACTTCTTTTATCCAAGCACAAAGAAAAGCACACACA...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR TCA 72 bp AAAAATAAAATTTGGGCACCCTTACTGAATTTCTACTaGGAATTCCATCAACTGCTGTCTGCTGACTTGCGA +
Preference number: 3 (lower is better)
Translates to: KNKIWAPLLNFY*EFHQLLSADLR
Trigger: TCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAATTCAGTAAGGGTGCCCAAATTTTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR TCA 72 bp AGTGCCATTTACATGACAATTCTACGCATGGCACTATaGTGGGATGATCACGTAATTTATCACCTAAACCAA +
Preference number: 3 (lower is better)
Translates to: SAIYMTILRMAL*WDDHVIYHLNQ
Trigger: TTGGTTTAGGTGATAAATTACGTGATCATCCCATCATAGTGCCATGCGTAGAATTGTCATGTAAATGGCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR CCA 72 bp CACACACAAAGAAGAATGTCTCATAGACATCATATGTaGCCTGAAAAGCCAAAATTATTTACAAACTGGCCC +
Preference number: 3 (lower is better)
Translates to: HTQRRMSHRHHM*PEKPKLFTNWP
Trigger: GGGCCAGTTTGTAAATAATTTTGGCTTTTCAGGCCACATATGATGTCTATGAGACATTCTTCTTTGTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659812.1
ENST00000665648.1
3UTR CCA 72 bp CTCTTGACAAGTATCATCCTTGAGATCCTCGCAATATaGCTTAGATTAGCAAATATGGTTAAACATTGGCAC +
Preference number: 3 (lower is better)
Translates to: LLTSIILEILAI*LRLANMVKHWH
Trigger: GTGCCAATGTTTAACCATATTTGCTAATCTAAGCCATATTGCGAGGATCTCAAGGATGATACTTGTCAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR CCA 72 bp ACTCCTATAGTTACCAGTCATTGGATAACTAATCATTaGATACCAGCTTCTTTCTGTAGAGGTACAAGACTC +
Preference number: 3 (lower is better)
Translates to: TPIVTSHWITNH*IPASFCRGTRL
Trigger: GAGTCTTGTACCTCTACAGAAAGAAGCTGGTATCCAATGATTAGTTATCCAATGACTGGTAACTATAGGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR-3UTR CAA 90 bp AGTTCCTCTTACACTCTCAGCCCTCAAACTAATTGTTTTATAAGCTATACTTCATCTCTAGATCAAGGGTaGGAGAATAATAGCCAACAG +
Preference number: 3 (lower is better)
Translates to: SSSYTLSPQTNCFISYTSSLDQG*ENNSQQ
Trigger: CTGTTGGCTATTATTCTCCAACCCTTGATCTAGAGA...TGAAGTATAGCTTATAAAACAATTAGTTTGAGGGCTGAGAGTGTAAGAGGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR-3UTR CAA 90 bp TTCTCCAAAAACTTAAGAAGAGTGACACACTATAGTACACGGGGTATTAAGCAATACTTTGTCAACTGTTaGTGGCCTATTATACACAGC +
Preference number: 3 (lower is better)
Translates to: FSKNLRRVTHYSTRGIKQYFVNC*WPIIHS
Trigger: GCTGTGTATAATAGGCCACAAACAGTTGACAAAGTA...TTGCTTAATACCCCGTGTACTATAGTGTGTCACTCTTCTTAAGTTTTTGGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR TCA 72 bp CCAAAATTGATTGCTCCTATCAATTCGAGGTATGTATaGATCCGTCCAATACAATTAACATCTCCACAGTTC +
Preference number: 3 (lower is better)
Translates to: PKLIAPINSRYV*IRPIQLTSPQF
Trigger: GAACTGTGGAGATGTTAATTGTATTGGACGGATTCATACATACCTCGAATTGATAGGAGCAATCAATTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR-3UTR CAA 90 bp ATCTTGTCTTTTCAAATACTAATCCCCACTGAGGTTCTTCTAACATCTGCTGTACTGAAGCAATGTAACTaGAACTGGAAACTGAAGATA +
Preference number: 3 (lower is better)
Translates to: ILSFQILIPTEVLLTSAVLKQCN*NWKLKI
Trigger: TATCTTCAGTTTCCAGTTCAAGTTACATTGCTTCAG...TACAGCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATTTGAAAAGACAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665648.1
3UTR-3UTR CAA 90 bp TTCTCCAAAAACTTAAGAAGAGTGACACACTATAGTACACGGGGTATTAAGCAATGTTCACATCCAAAATaGATTGCTCCTATCAATTCG +
Preference number: 3 (lower is better)
Translates to: FSKNLRRVTHYSTRGIKQCSHPK*IAPINS
Trigger: CGAATTGATAGGAGCAATCAATTTTGGATGTGAACA...TTGCTTAATACCCCGTGTACTATAGTGTGTCACTCTTCTTAAGTTTTTGGAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR TCA 72 bp ATTATCCATCTTGTCTTTTCAAATACTAATCCCCACTaGGGTTCTTCTAACATCTGCTGTACTTCAAATTTG +
Preference number: 3 (lower is better)
Translates to: IIHLVFSNTNPH*GSSNICCTSNL
Trigger: CAAATTTGAAGTACAGCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATTTGAAAAGACAAGATGGATAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp CCTGATCCCTGGGTGGTCAGAGCCACAGCTTCCCAGTGTTCAGAGGCAGCAGAAGCTTGCTTGGCTTCCTaGTCCCTGGGTGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PDPWVVRATASQCSEAAEACLAS*SLGGQS
Trigger: GCTCTGACCACCCAGGGATCAGGAAGCCAAGCAAGC...TTCTGCTGCCTCTGAACACTGGGAAGCTGTGGCTCTGACCACCCAGGGATCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR CAA 72 bp TGTAGGGCCCCTTCATTCACTGGTGGCAAGGGCTGCTaGCTTGGCTTCCTGATCCCTGGGTGGTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: CRAPSFTGGKGC*LGFLIPGWSEP
Trigger: TGGCTCTGACCACCCAGGGATCAGGAAGCCAAGCAAGCAGCCCTTGCCACCAGTGAATGAAGGGGCCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp ACCCTACGTCTCCTTGTACGCATAGACTGCAGACGCTGGGCAAGTTGGTATGCTCCTCTTCAGCCGCCATaGTGGGACCTGACCCCGTCC +
Preference number: 4 (lower is better)
Translates to: TLRLLVRIDCRRWASWYAPLQPP*WDLTPS
Trigger: GGACGGGGTCAGGTCCCATCATGGCGGCTGAAGAGG...AGCATACCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAGGAGACGTAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR TCA 90 bp GCCTTCCACCTAGCAGGACCTTCGCATGCAGCTGCCTCCTTTGGACTGTGTGGAGGCCCAACTTCACGGTaGAGGCCAAGACAGCTATTA +
Preference number: 4 (lower is better)
Translates to: AFHLAGPSHAAASFGLCGGPTSR*RPRQLL
Trigger: TAATAGCTGTCTTGGCCTTCACCGTGAAGTTGGGCC...TCCACACAGTCCAAAGGAGGCAGCTGCATGCGAAGGTCCTGCTAGGTGGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp GCCTTCCACCTAGCAGGACCTTCGCATGCAGCTGCCTCCTTTGGACTGTGTGGACTTGTACGCATAGACTaGAGACGCTGGGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: AFHLAGPSHAAASFGLCGLVRID*RRWASW
Trigger: CCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAG...TCCACACAGTCCAAAGGAGGCAGCTGCATGCGAAGGTCCTGCTAGGTGGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp CCCCTGACCCTGAAGGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGAGCAGGACCTTCGCATaGAGCTGCCTCCTTTGGACT +
Preference number: 4 (lower is better)
Translates to: PLTLKDNLAMHLSIHHRESRTFA*SCLLWT
Trigger: AGTCCAAAGGAGGCAGCTGCATGCGAAGGTCCTGCT...CTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCCTTCAGGGTCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp CCTGATCCCTGGGTGGTCAGAGCCACAGCTTCCCAGTGTTCAGAGGCAGCAGAATGCAGCTGCCTCCTTTaGACTGTGTGGATCGACTCT +
Preference number: 4 (lower is better)
Translates to: PDPWVVRATASQCSEAAECSCLL*TVWIDS
Trigger: AGAGTCGATCCACACAGTCCAAAGGAGGCAGCTGCA...TTCTGCTGCCTCTGAACACTGGGAAGCTGTGGCTCTGACCACCCAGGGATCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp CCTGATCCCTGGGTGGTCAGAGCCACAGCTTCCCAGTGTTCAGAGGCAGCAGAATTCTTCTGGGGTGTTTaGGAAGACAACTCGTCCACC +
Preference number: 4 (lower is better)
Translates to: PDPWVVRATASQCSEAAEFFWGV*EDNSST
Trigger: GGTGGACGAGTTGTCTTCTCAAACACCCCAGAAGAA...TTCTGCTGCCTCTGAACACTGGGAAGCTGTGGCTCTGACCACCCAGGGATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp CCTTTGGACTGTGTGGATCGACTCTCCACCTGTATTCCAGGTCCTTCCTCTAGCCCATCGCCAATCCCATaGGCATCTCTGGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PLDCVDRLSTCIPGPSSSPSPIP*ASLELA
Trigger: TGCCAGCTCCAGAGATGCTCATGGGATTGGCGATGG...GCTAGAGGAAGGACCTGGAATACAGGTGGAGAGTCGATCCACACAGTCCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp CCCCTGACCCTGAAGGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGAACACTTGTCTGGGGTaGGGGAGGCAGGATTGTTTG +
Preference number: 4 (lower is better)
Translates to: PLTLKDNLAMHLSIHHRENTCLG*GRQDCL
Trigger: CAAACAATCCTGCCTCCCTCACCCCAGACAAGTGTT...CTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCCTTCAGGGTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp GAGGCCATCGCCAATCCCATGAGCATCTCTGGAGCTGGCATGTCTCTACTGAGTTGGGAGGCTGAGGCATaGGAATTGCTTGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: EAIANPMSISGAGMSLLSWEAEA*ELLESR
Trigger: CCTGGATTCAAGCAATTCTCATGCCTCAGCCTCCCA...ACTCAGTAGAGACATGCCAGCTCCAGAGATGCTCATGGGATTGGCGATGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp CTCTTGGCAACAACACTTGTCTGGGGTGAGGGAGGCAGGATTGTTTGGACACAGACCTTCGCATGCAGCTaGCTCCTTTGGACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLATTLVWGEGGRIVWTQTFACS*LLWTVW
Trigger: CCACACAGTCCAAAGGAGGCAGCTGCATGCGAAGGT...CTGTGTCCAAACAATCCTGCCTCCCTCACCCCAGACAAGTGTTGTTGCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCACACAGTCTCCTCTGTTaGGTTGAGAGCTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPHSLLC*VESCRG
Trigger: ACCTCTGCAGCTCTCAACCCAACAGAGGAGACTGTG...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CCCCTGACCCTGAAGGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGCTCCTTTGGACTGTGTaGATCGACTCTCCACCTGTA +
Preference number: 4 (lower is better)
Translates to: PLTLKDNLAMHLSIHHRELLWTV*IDSPPV
Trigger: TACAGGTGGAGAGTCGATCCACACAGTCCAAAGGAG...CTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCCTTCAGGGTCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp GCCTTCCACCTAGCAGGACCTTCGCATGCAGCTGCCTCCTTTGGACTGTGTGGAGGAGGCAGGATTGTTTaGACACAGGAAAAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: AFHLAGPSHAAASFGLCGGGRIV*TQEKLN
Trigger: GTTCAGCTTTTCCTGTGTCCAAACAATCCTGCCTCC...TCCACACAGTCCAAAGGAGGCAGCTGCATGCGAAGGTCCTGCTAGGTGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp CTCTTGGCAACAACACTTGTCTGGGGTGAGGGAGGCAGGATTGTTTGGACACAGCCAGGTCTTCCAGGGTaGAGTGAAGATGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: LLATTLVWGEGGRIVWTQPGLPG*SEDDVG
Trigger: GCCAACATCATCTTCACTTCACCCTGGAAGACCTGG...CTGTGTCCAAACAATCCTGCCTCCCTCACCCCAGACAAGTGTTGTTGCCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp ACCCTACGTCTCCTTGTACGCATAGACTGCAGACGCTGGGCAAGTTGGTATGCTCTTGTACGCATAGACTaGAGACGCTGGGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: TLRLLVRIDCRRWASWYALVRID*RRWASW
Trigger: CCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAG...AGCATACCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAGGAGACGTAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR GCA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCCTTGTACGCATAGACTaGAGACGCTGGGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: RSESRRKILSMGTLLWESLVRID*RRWASW
Trigger: CCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAG...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCATGTTGGGTTGAGAGCTaGAGAGGTTCTGACTGTGCT +
Preference number: 4 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPCWVES*RGSDCA
Trigger: AGCACAGTCAGAACCTCTGCAGCTCTCAACCCAACA...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp CCCCTGACCCTGAAGGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGAGTAGAACCCAGAGCTaGACCCCTTTCCAACAGTTT +
Preference number: 4 (lower is better)
Translates to: PLTLKDNLAMHLSIHHRESRTQS*TPFQQF
Trigger: AAACTGTTGGAAAGGGGTGCAGCTCTGGGTTCTACT...CTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCCTTCAGGGTCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp CCTTTGGACTGTGTGGATCGACTCTCCACCTGTATTCCAGGTCCTTCCTCTAGCGATAAAGCAGGACTTTaGCTCTGGATGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PLDCVDRLSTCIPGPSSSDKAGL*LWMRRA
Trigger: AGCCCTGCGCATCCAGAGCCAAAGTCCTGCTTTATC...GCTAGAGGAAGGACCTGGAATACAGGTGGAGAGTCGATCCACACAGTCCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp GCCTTCCACCTAGCAGGACCTTCGCATGCAGCTGCCTCCTTTGGACTGTGTGGAACAGTAAGAATCATCTaGTGGTCATTTCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AFHLAGPSHAAASFGLCGTVRII*WSFLAA
Trigger: GGCTGCCAGAAATGACCACCAGATGATTCTTACTGT...TCCACACAGTCCAAAGGAGGCAGCTGCATGCGAAGGTCCTGCTAGGTGGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR CAA 72 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATaGCTCAGTAAAGGACTAGAACACCGTGGTGGACCC +
Preference number: 4 (lower is better)
Translates to: SRPGCLVSQPTA*LSKGLEHRGGP
Trigger: GGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp CCTGATCCCTGGGTGGTCAGAGCCACAGCTTCCCAGTGTTCAGAGGCAGCAGAATTATGGCCGGTCTTCTaGTTTGGTGTTTCTTTATCC +
Preference number: 4 (lower is better)
Translates to: PDPWVVRATASQCSEAAELWPVF*FGVSLS
Trigger: GGATAAAGAAACACCAAATCAGAAGACCGGCCATAA...TTCTGCTGCCTCTGAACACTGGGAAGCTGTGGCTCTGACCACCCAGGGATCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp CCCCTGACCCTGAAGGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGGAAAGATTTTATCCATaGGGACGCTGCTATGGGAGA +
Preference number: 4 (lower is better)
Translates to: PLTLKDNLAMHLSIHHREERFYP*GRCYGR
Trigger: TCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTC...CTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCCTTCAGGGTCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp GGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGAAAATCAGGCAACGGGATGCGCAGGGCTCTaGAGAAACTTGACAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GQSGHAPQYPPQRENQATGCAGL*RNLTRL
Trigger: AAGCCTTGTCAAGTTTCTCCAGAGCCCTGCGCATCC...CGTTGCCTGATTTTCTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp CCTGATCCCTGGGTGGTCAGAGCCACAGCTTCCCAGTGTTCAGAGGCAGCAGAACATCTTTTCTGTCTCTaGTTCGTACTTTGTCAACTG +
Preference number: 4 (lower is better)
Translates to: PDPWVVRATASQCSEAAEHLFCL*FVLCQL
Trigger: CAGTTGACAAAGTACGAATCAGAGACAGAAAAGATG...TTCTGCTGCCTCTGAACACTGGGAAGCTGTGGCTCTGACCACCCAGGGATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTCCCTTGATTTACTGGTaGGGAGCATGGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TENSINCCLLTCDWMASTPLIYW*GAWGPG
Trigger: ACCTGGACCCCATGCTCCTCACCAGTAAATCAAGGG...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGAGCTGCAGAGGTTCTaGCTGTGCTTACAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMELQRF*LCLQSA
Trigger: TGCAGACTGTAAGCACAGTCAGAACCTCTGCAGCTC...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTGAGCTGCAGAGGTTCTaGCTGTGCTTACAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSELQRF*LCLQSA
Trigger: TGCAGACTGTAAGCACAGTCAGAACCTCTGCAGCTC...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCGAGAATTCCATCAACTaGTGTCTGCTGACTTGCGAC +
Preference number: 4 (lower is better)
Translates to: RSESRRKILSMGTLLWESENSIN*CLLTCD
Trigger: GTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTC...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR CCA 90 bp CCTGATCCCTGGGTGGTCAGAGCCACAGCTTCCCAGTGTTCAGAGGCAGCAGAATTCTATTTCCTGTTCTaGTGGCTTAAGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PDPWVVRATASQCSEAAEFYFLF*WLKLFF
Trigger: GAAGAAGAGCTTAAGCCACCAGAACAGGAAATAGAA...TTCTGCTGCCTCTGAACACTGGGAAGCTGTGGCTCTGACCACCCAGGGATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp CTTCCCTTCCCCAGAGAACCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTAACACCAGTTTCCCCATaGGTCTCGGACCCTACGTCT +
Preference number: 4 (lower is better)
Translates to: LPFPREPKSGTIPPSGTLTPVSP*VSDPTS
Trigger: AGACGTAGGGTCCGAGACCCATGGGGAAACTGGTGT...TAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGGTTCTCTGGGGAAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCAACTCAGACTGTTACATaGTTCTGCTGCACAGACTTC +
Preference number: 4 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPTQTVT*FCCTDF
Trigger: GAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGT...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGCACCGTGGTGGACCCTaGTTTGCAGAACACTCTGAT +
Preference number: 4 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMHRGGP*FAEHSD
Trigger: ATCAGAGTGTTCTGCAAACCAGGGTCCACCACGGTG...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTTGCAGTGCTCCTGGATaGAGTGGCAAAGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TENSINCCLLTCDWMASTCSAPG*SGKGFS
Trigger: GGAGAAGCCTTTGCCACTCCATCCAGGAGCACTGCA...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGTGCAGTGCTCCTGGATaGAGTGGCAAAGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KESITAFHRITQLRSLEGCSAPG*SGKGFS
Trigger: GGAGAAGCCTTTGCCACTCCATCCAGGAGCACTGCA...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGGAGGAAGGGAAGGAATGGTATaGACAGAAGACTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TIGSSSSPHQDPGREMGGREGMV*TEDWEQ
Trigger: CTGCTCCCAGTCTTCTGTCCATACCATTCCTTCCCT...TCCTCCCATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CCTTTGGACTGTGTGGATCGACTCTCCACCTGTATTCCAGGTCCTTCCTCTAGCAAAATTAGCCAGGGATaGTGGCACGGGCCTGTAATT +
Preference number: 4 (lower is better)
Translates to: PLDCVDRLSTCIPGPSSSKISQG*WHGPVI
Trigger: AATTACAGGCCCGTGCCACCATCCCTGGCTAATTTT...GCTAGAGGAAGGACCTGGAATACAGGTGGAGAGTCGATCCACACAGTCCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp GGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGAAAATCAGGCAACGTCCCATGAGCATCTCTaGAGCTGGCATGTCTCTACT +
Preference number: 4 (lower is better)
Translates to: GQSGHAPQYPPQRENQATSHEHL*SWHVST
Trigger: AGTAGAGACATGCCAGCTCCAGAGATGCTCATGGGA...CGTTGCCTGATTTTCTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
3UTR CAA 72 bp CAGAGAGATGCTCAAACGTTTGTCCTTCTAAGTCCTTaGCATCACACCAGTTTCCCCATGGGTCTCGGACCC +
Preference number: 4 (lower is better)
Translates to: QRDAQTFVLLSP*HHTSFPMGLGP
Trigger: GGGTCCGAGACCCATGGGGAAACTGGTGTGATGCAAAGGACTTAGAAGGACAAACGTTTGAGCATCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR TCA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCATTATGGCCGGTCTTCTaGTTTGGTGTTTCTTTATCC +
Preference number: 4 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPLWPVF*FGVSLS
Trigger: GGATAAAGAAACACCAAATCAGAAGACCGGCCATAA...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR TCA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCGACAAGTATCATCCTTaGGATCCTCGCAATATGGCT +
Preference number: 4 (lower is better)
Translates to: RSESRRKILSMGTLLWESDKYHP*DPRNMA
Trigger: AGCCATATTGCGAGGATCTCAAGGATGATACTTGTC...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR TCA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCATGGGGGAATAGCACATaGAGCCATTTAAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPWGNST*SHLRKG
Trigger: ACCTTTTCTTAAATGGCTTCATGTGCTATTCCCCCA...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp GGAATGGTTAGAAAACTAACCATTTCAAGTCCCAGAATATCAGAGTTCTGCATGCCTCTTCAGCCGCCATaGTGGGACCTGACCCCGTCC +
Preference number: 4 (lower is better)
Translates to: GMVRKLTISSPRISEFCMPLQPP*WDLTPS
Trigger: GGACGGGGTCAGGTCCCATCATGGCGGCTGAAGAGG...CATGCAGAACTCTGATATTCTGGGACTTGAAATGGTTAGTTTTCTAACCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp TGTATGAATCCGTCCAATACAATTAACATCTCCACAGTTCTTCAGGCCAGGACGGGCATTGGCAGGATTTaGACCCAGGCAGTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CMNPSNTINISTVLQARTGIGRI*TQAVRL
Trigger: GAGCCTGACTGCCTGGGTTCAAATCCTGCCAATGCC...CGTCCTGGCCTGAAGAACTGTGGAGATGTTAATTGTATTGGACGGATTCATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR GCA 90 bp CCTGATCCCTGGGTGGTCAGAGCCACAGCTTCCCAGTGTTCAGAGGCAGCAGAAAATAGTAGTGGTCACTaGAGCAGTGGTAAATTCTTA +
Preference number: 4 (lower is better)
Translates to: PDPWVVRATASQCSEAAENSSGH*SSGKFL
Trigger: TAAGAATTTACCACTGCTGCAGTGACCACTACTATT...TTCTGCTGCCTCTGAACACTGGGAAGCTGTGGCTCTGACCACCCAGGGATCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGACACCAGTTTCCCCATaGGTCTCGGACCCTACGTCT +
Preference number: 4 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKTPVSP*VSDPTS
Trigger: AGACGTAGGGTCCGAGACCCATGGGGAAACTGGTGT...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CCA 90 bp AAGGTTTCTGAGGCCTGTGTTTGTGATACAGGATCCATCTCACACTGTAGTCCTACACCAGTTTCCCCATaGGTCTCGGACCCTACGTCT +
Preference number: 4 (lower is better)
Translates to: KVSEACVCDTGSISHCSPTPVSP*VSDPTS
Trigger: AGACGTAGGGTCCGAGACCCATGGGGAAACTGGTGT...AGGACTACAGTGTGAGATGGATCCTGTATCACAAACACAGGCCTCAGAAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGAAAATCAGGCAACGATGGGGACGCTGCTATaGGAGAGCCTGTATTTTTCT +
Preference number: 4 (lower is better)
Translates to: GQSGHAPQYPPQRENQATMGTLL*ESLYFS
Trigger: AGAAAAATACAGGCTCTCCCATAGCAGCGTCCCCAT...CGTTGCCTGATTTTCTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp ACCCTACGTCTCCTTGTACGCATAGACTGCAGACGCTGGGCAAGTTGGTATGCTGAAAGATTTTATCCATaGGGACGCTGCTATGGGAGA +
Preference number: 4 (lower is better)
Translates to: TLRLLVRIDCRRWASWYAERFYP*GRCYGR
Trigger: TCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTC...AGCATACCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAGGAGACGTAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR CCA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCGAAAGATTTTATCCATaGGGACGCTGCTATGGGAGA +
Preference number: 4 (lower is better)
Translates to: RSESRRKILSMGTLLWESERFYP*GRCYGR
Trigger: TCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTC...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGCACCGTGGTGGACCCTaGTTTGCAGAACACTCTGAT +
Preference number: 4 (lower is better)
Translates to: KESITAFHRITQLRSLEGHRGGP*FAEHSD
Trigger: ATCAGAGTGTTCTGCAAACCAGGGTCCACCACGGTG...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTACACCGTGGTGGACCCTaGTTTGCAGAACACTCTGAT +
Preference number: 4 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLHRGGP*FAEHSD
Trigger: ATCAGAGTGTTCTGCAAACCAGGGTCCACCACGGTG...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTACTAGAACACCGTGGTaGACCCTGGTTTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSTRTPW*TLVCRT
Trigger: TGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGT...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTAAACTGCAGTGCTCCTaGATGGAGTGGCAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSKLQCS*MEWQRL
Trigger: AAGCCTTTGCCACTCCATCCAGGAGCACTGCAGTTT...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGGGGCATCCTGACTATTaGTTCCTCCAGCTCACCTCA +
Preference number: 4 (lower is better)
Translates to: KESITAFHRITQLRSLEGGHPDY*FLQLTS
Trigger: TGAGGTGAGCTGGAGGAACCAATAGTCAGGATGCCC...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTCTGCTGACTTGCGACTaGATGGCTTCAACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: TENSINCCLLTCDWMASTLLTCD*MASTQV
Trigger: CACCTGAGTTGAAGCCATCCAGTCGCAAGTCAGCAG...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR CAA 72 bp ACAGTAAGAATCATCTGGTGGTCATTTCTGGCAGCCTaGAGTAGAACCCAGAGCTGCACCCCTTTCCAACAG +
Preference number: 4 (lower is better)
Translates to: TVRIIWWSFLAA*SRTQSCTPFQQ
Trigger: CTGTTGGAAAGGGGTGCAGCTCTGGGTTCTACTCAAGGCTGCCAGAAATGACCACCAGATGATTCTTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCTATCGTCCACTTTACTaGGTAACTGGCTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: RSESRRKILSMGTLLWESYRPLY*VTGWFC
Trigger: ACAAAACCAGCCAGTTACTCAGTAAAGTGGACGATA...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp CCCCTGACCCTGAAGGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGTCTTCATTTTTAACTTaGAGATTATGGCCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: PLTLKDNLAMHLSIHHRESSFLT*RLWPVF
Trigger: GAAGACCGGCCATAATCTTCAAGTTAAAAATGAAGA...CTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCCTTCAGGGTCAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGTCAACTGCTGTCTGCTaGCTTGCGACTGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKSTAVC*LATGWL
Trigger: AAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGA...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp GCCTTCCACCTAGCAGGACCTTCGCATGCAGCTGCCTCCTTTGGACTGTGTGGAACATCCAAAATTGATTaGTCCTATCAATTCGAGGTA +
Preference number: 4 (lower is better)
Translates to: AFHLAGPSHAAASFGLCGTSKID*SYQFEV
Trigger: TACCTCGAATTGATAGGAGCAATCAATTTTGGATGT...TCCACACAGTCCAAAGGAGGCAGCTGCATGCGAAGGTCCTGCTAGGTGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp TGGACTGTGTGGATCGACTCTCCACCTGTATTCCAGGTCCTTCCTCTAGCTGGACTGGGCAAGTTGGTATaGTTCTACTGCATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: WTVWIDSPPVFQVLPLAGLGKLV*FYCIFS
Trigger: AGAAAAGATGCAGTAGAAGCATACCAACTTGCCCAG...TCCAGCTAGAGGAAGGACCTGGAATACAGGTGGAGAGTCGATCCACACAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCCTGGGCAAGTTGGTATaGTTCTACTGCATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RSESRRKILSMGTLLWESLGKLV*FYCIFS
Trigger: AGAAAAGATGCAGTAGAAGCATACCAACTTGCCCAG...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp GGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGAAAATCAGGCAACGTCCTCAGCAGAGAGATaGTCAAACGTTTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GQSGHAPQYPPQRENQATSSAER*SNVCPS
Trigger: AGAAGGACAAACGTTTGAGCATCTCTCTGCTGAGGA...CGTTGCCTGATTTTCTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCACTGTTACATGGTTCTaGTGCACAGACTTCAACTAC +
Preference number: 4 (lower is better)
Translates to: RSESRRKILSMGTLLWESTVTWF*CTDFNY
Trigger: GTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGT...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp AGAAATGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTGGCATGTTGAAGGAGAATTCCATCAACTaGTGTCTGCTGACTTGCGAC +
Preference number: 4 (lower is better)
Translates to: RNGRKVMQRRPAQVGMLKENSIN*CLLTCD
Trigger: GTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTC...CTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GCCTTCCACCTAGCAGGACCTTCGCATGCAGCTGCCTCCTTTGGACTGTGTGGATTAGCTTTGAAATTTTaGTCCATCTTCGGCCAAATT +
Preference number: 4 (lower is better)
Translates to: AFHLAGPSHAAASFGLCGLALKF*SIFGQI
Trigger: AATTTGGCCGAAGATGGACCAAAATTTCAAAGCTAA...TCCACACAGTCCAAAGGAGGCAGCTGCATGCGAAGGTCCTGCTAGGTGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp AGAAATGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTGGCATGTTGAAGGAGAAGGCAACTGCCTaGCATCAACTATTATTCCCC +
Preference number: 4 (lower is better)
Translates to: RNGRKVMQRRPAQVGMLKEKATA*HQLLFP
Trigger: GGGGAATAATAGTTGATGCCAGGCAGTTGCCTTCTC...CTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CCA 90 bp ACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGGAGGATTTCAAATAGCGTTCTaGTGTTTTAGCTTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: TIGSSSSPHQDPGREMGGFQIAF*CFSLAP
Trigger: GGGCGCCAAGCTAAAACACCAGAACGCTATTTGAAA...TCCTCCCATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CCA 90 bp ATACTAAGCCATAAAATTCAGGCCCTTGATTTACTGGTGAGGAGCATGGGGTCCCACCGTGGTGGACCCTaGTTTGCAGAACACTCTGAT +
Preference number: 4 (lower is better)
Translates to: ILSHKIQALDLLVRSMGSHRGGP*FAEHSD
Trigger: ATCAGAGTGTTCTGCAAACCAGGGTCCACCACGGTG...GGACCCCATGCTCCTCACCAGTAAATCAAGGGCCTGAATTTTATGGCTTAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGACTAGAACACCGTGGTaGACCCTGGTTTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: KESITAFHRITQLRSLEGTRTPW*TLVCRT
Trigger: TGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGT...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTCGCAACTTCGGAGCTTaGAAGGGAATACTAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSRNFGA*KGILSH
Trigger: ATGGCTTAGTATTCCCTTCCAAGCTCCGAAGTTGCG...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AGAAATGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTGGCATGTTGAAGGTAGTGCCAGCAATGTaGGTACCTGTGGTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: RNGRKVMQRRPAQVGMLKVVPAM*VPVVAK
Trigger: TTTTGCAACCACAGGTACCCACATTGCTGGCACTAC...CTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTAAACTGCAGTGCTCCTaGATGGAGTGGCAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: TENSINCCLLTCDWMASTKLQCS*MEWQRL
Trigger: AAGCCTTTGCCACTCCATCCAGGAGCACTGCAGTTT...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AAGGTTTCTGAGGCCTGTGTTTGTGATACAGGATCCATCTCACACTGTAGTCCTCACAGTCTCCTCTGTTaGGTTGAGAGCTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: KVSEACVCDTGSISHCSPHSLLC*VESCRG
Trigger: ACCTCTGCAGCTCTCAACCCAACAGAGGAGACTGTG...AGGACTACAGTGTGAGATGGATCCTGTATCACAAACACAGGCCTCAGAAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR CCA 90 bp TGGACTGTGTGGATCGACTCTCCACCTGTATTCCAGGTCCTTCCTCTAGCTGGATCTAGTTCCCTCAGTTaGACAGTAAGAATCATCTGG +
Preference number: 4 (lower is better)
Translates to: WTVWIDSPPVFQVLPLAGSSSLS*TVRIIW
Trigger: CCAGATGATTCTTACTGTCCAACTGAGGGAACTAGA...TCCAGCTAGAGGAAGGACCTGGAATACAGGTGGAGAGTCGATCCACACAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp AGTTGGACAGTAAGAATCATCTGGTGGTCATTTCTGGCAGCCTTGAGTAGAACCGGGGACGCTAGCAAGTaGGACTGTGGAGATGTGAAT +
Preference number: 4 (lower is better)
Translates to: SWTVRIIWWSFLAALSRTGDASK*DCGDVN
Trigger: ATTCACATCTCCACAGTCCCACTTGCTAGCGTCCCC...GGTTCTACTCAAGGCTGCCAGAAATGACCACCAGATGATTCTTACTGTCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp GGAATGGTTAGAAAACTAACCATTTCAAGTCCCAGAATATCAGAGTTCTGCATGGGCAGCTGGAGAGACTaGCCCCCTGACCCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: GMVRKLTISSPRISEFCMGSWRD*PPDPEG
Trigger: TCCTTCAGGGTCAGGGGGCCAGTCTCTCCAGCTGCC...CATGCAGAACTCTGATATTCTGGGACTTGAAATGGTTAGTTTTCTAACCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp GGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGAAAATCAGGCAACGTATCGTCCACTTTACTaGGTAACTGGCTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: GQSGHAPQYPPQRENQATYRPLY*VTGWFC
Trigger: ACAAAACCAGCCAGTTACTCAGTAAAGTGGACGATA...CGTTGCCTGATTTTCTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCATCTTCATTTTTAACTTaGAGATTATGGCCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPSSFLT*RLWPVF
Trigger: GAAGACCGGCCATAATCTTCAAGTTAAAAATGAAGA...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR TCA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCAGATTCAGAAAGCATATaGAACTGGGCTGAATATGTA +
Preference number: 4 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPDSESI*NWAEYV
Trigger: TACATATTCAGCCCAGTTTCATATGCTTTCTGAATC...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTCCCAAATCACAAAGTTaGGACAAGAACCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: TENSINCCLLTCDWMASTPKSQS*DKNQVT
Trigger: GGTGACCTGGTTCTTGTCTCAACTTTGTGATTTGGG...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp CACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTACCCTTGATTTACTGGTaGGGAGCATGGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HSKSFCKQVRSESRRKILPLIYW*GAWGPG
Trigger: ACCTGGACCCCATGCTCCTCACCAGTAAATCAAGGG...TAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR TCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGAAGGCCCCAAACTCTTaGCAAGTATCATCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMKAPNS*QVSSLR
Trigger: TCTCAAGGATGATACTTGTCAAGAGTTTGGGGCCTT...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGAATTCCAGGGCATCCTaGCTATTGGTTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKNSRAS*LLVPPA
Trigger: AGCTGGAGGAACCAATAGTCAGGATGCCCTGGAATT...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTAATTCCAGGGCATCCTaGCTATTGGTTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ISTENSINCCLLTCDWMANSRAS*LLVPPA
Trigger: AGCTGGAGGAACCAATAGTCAGGATGCCCTGGAATT...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp ACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGGAGGATGGGGGAATAGCACATaGAGCCATTTAAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: TIGSSSSPHQDPGREMGGWGNST*SHLRKG
Trigger: ACCTTTTCTTAAATGGCTTCATGTGCTATTCCCCCA...TCCTCCCATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCACCTCTTCAGCCGCCATaGTGGGACCTGACCCCGTCC +
Preference number: 4 (lower is better)
Translates to: IISVTTHPYLIYSHKQISPLQPP*WDLTPS
Trigger: GGACGGGGTCAGGTCCCATCATGGCGGCTGAAGAGG...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000665648.1
CDS-3UTR TCA 90 bp CTTCCCTTCCCCAGAGAACCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTAGGCTCTGGAGAAACTTaGCAAGGCTTTCTGCAAACA +
Preference number: 4 (lower is better)
Translates to: LPFPREPKSGTIPPSGTLGSGET*QGFLQT
Trigger: TGTTTGCAGAAAGCCTTGTCAAGTTTCTCCAGAGCC...TAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGGTTCTCTGGGGAAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp CTTCCCTTCCCCAGAGAACCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTACTGGCATGTCTCTACTaGGTTGTCCTATTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LPFPREPKSGTIPPSGTLLACLY*VVLLRQ
Trigger: TTGCCTCAATAGGACAACTCAGTAGAGACATGCCAG...TAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGGTTCTCTGGGGAAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCATTGGTATGCTTCTACTaGATCTTTTCTGTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPLVCFY*IFSVSD
Trigger: ATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAA...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR GCA 90 bp TGGACTGTGTGGATCGACTCTCCACCTGTATTCCAGGTCCTTCCTCTAGCTGGAGTTACATGGTTCTGCTaGACAGACTTCAACTACTTT +
Preference number: 4 (lower is better)
Translates to: WTVWIDSPPVFQVLPLAGVTWFC*TDFNYF
Trigger: AAAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAAC...TCCAGCTAGAGGAAGGACCTGGAATACAGGTGGAGAGTCGATCCACACAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGTGCTGTCTGCTGACTTaGGACTGGATGGCTTCAACT +
Preference number: 4 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKCCLLT*DWMAST
Trigger: AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCA...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTGCTGTCTGCTGACTTaGGACTGGATGGCTTCAACT +
Preference number: 4 (lower is better)
Translates to: ISTENSINCCLLTCDWMACCLLT*DWMAST
Trigger: AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCA...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp AAGGTTTCTGAGGCCTGTGTTTGTGATACAGGATCCATCTCACACTGTAGTCCTTGCTGTCTGCTGACTTaGGACTGGATGGCTTCAACT +
Preference number: 4 (lower is better)
Translates to: KVSEACVCDTGSISHCSPCCLLT*DWMAST
Trigger: AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCA...AGGACTACAGTGTGAGATGGATCCTGTATCACAAACACAGGCCTCAGAAACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR CCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGTTACAGCATTCAAGTTaGGATCAGCACGTCCCCTTA +
Preference number: 4 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMLQHSS*DQHVPL
Trigger: TAAGGGGACGTGCTGATCCCAACTTGAATGCTGTAA...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CCA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGGAGAAGGCAACTGCCTaGCATCAACTATTATTCCCC +
Preference number: 4 (lower is better)
Translates to: KESITAFHRITQLRSLEGEKATA*HQLLFP
Trigger: GGGGAATAATAGTTGATGCCAGGCAGTTGCCTTCTC...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CCA 90 bp GTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTTGCTCAGAGTCTTCCTCACACCAGTTTCCCCATaGGTCTCGGACCCTACGTCT +
Preference number: 4 (lower is better)
Translates to: VKNSSAIKQLVTLLRVFLTPVSP*VSDPTS
Trigger: AGACGTAGGGTCCGAGACCCATGGGGAAACTGGTGT...GAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGGAGGAGCGATAAGAGCCATCTaGGCTAATTTCCTCACTTAT +
Preference number: 4 (lower is better)
Translates to: TIGSSSSPHQDPGREMGGAIRAI*ANFLTY
Trigger: ATAAGTGAGGAAATTAGCCCAGATGGCTCTTATCGC...TCCTCCCATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTAATGGGGACGCTGCTATaGGAGAGCCTGTATTTTTCT +
Preference number: 4 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLMGTLL*ESLYFS
Trigger: AGAAAAATACAGGCTCTCCCATAGCAGCGTCCCCAT...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTGAAAGATTTTATCCATaGGGACGCTGCTATGGGAGA +
Preference number: 4 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSERFYP*GRCYGR
Trigger: TCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTC...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AGAAATGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTGGCATGTTGAAGGAAAGATTTTATCCATaGGGACGCTGCTATGGGAGA +
Preference number: 4 (lower is better)
Translates to: RNGRKVMQRRPAQVGMLKERFYP*GRCYGR
Trigger: TCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTC...CTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CTGAACACAACAGTAAAGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTACTAGAACACCGTGGTaGACCCTGGTTTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: LNTTVKPTRLLSFTAYSITRTPW*TLVCRT
Trigger: TGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGT...AATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTACTGTTGTGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTAGTAGTGCCAGCAATGTaGGTACCTGTGGTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLVVPAM*VPVVAK
Trigger: TTTTGCAACCACAGGTACCCACATTGCTGGCACTAC...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GTAAACATTATTAAAGGCAGGTGTTCCTTTGAGACTCTGCCTCCTGAACTTCCTCTTCTCCAAGGACTGTaGTGGTGGGAGAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: VNIIKGRCSFETLPPELPLLQGL*WWEKGT
Trigger: TGTCCCCTTCTCCCACCACCACAGTCCTTGGAGAAG...AGGAAGTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTTTAATAATGTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTATGCAGTGCTCCTGGATaGAGTGGCAAAGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HSKSFCKQVRSESRRKILCSAPG*SGKGFS
Trigger: GGAGAAGCCTTTGCCACTCCATCCAGGAGCACTGCA...TAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR CCA 90 bp CTGAACACAACAGTAAAGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTAGGGAAGGAATGGTATaGACAGAAGACTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LNTTVKPTRLLSFTAYSIREGMV*TEDWEQ
Trigger: CTGCTCCCAGTCTTCTGTCCATACCATTCCTTCCCT...AATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTACTGTTGTGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTGGGCATCCTGACTATTaGTTCCTCCAGCTCACCTCA +
Preference number: 4 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSGHPDY*FLQLTS
Trigger: TGAGGTGAGCTGGAGGAACCAATAGTCAGGATGCCC...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR CCA 90 bp GGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGAAAATCAGGCAACGGTTCTGCATGCTGATTaGGTTCTGCCATTTAGATGT +
Preference number: 4 (lower is better)
Translates to: GQSGHAPQYPPQRENQATVLHAD*VLPFRC
Trigger: ACATCTAAATGGCAGAACCCAATCAGCATGCAGAAC...CGTTGCCTGATTTTCTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTTATCGTCCACTTTACTaGGTAACTGGCTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSYRPLY*VTGWFC
Trigger: ACAAAACCAGCCAGTTACTCAGTAAAGTGGACGATA...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGCGTCCACCTCATCTGTaGTGTCTACTTCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: KESITAFHRITQLRSLEGRPPHL*CLLLHH
Trigger: ATGATGAAGAAGTAGACATCACAGATGAGGTGGACG...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR TCA 90 bp ACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGGAGGACATCTTTTCTGTCTCTaGTTCGTACTTTGTCAACTG +
Preference number: 4 (lower is better)
Translates to: TIGSSSSPHQDPGREMGGHLFCL*FVLCQL
Trigger: CAGTTGACAAAGTACGAATCAGAGACAGAAAAGATG...TCCTCCCATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR TCA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTCTCTGTTCTCTTCACTaGTGGTGTTATCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLLCSLH*WCYPRS
Trigger: GGACCTTGGATAACACCATCAGTGAAGAGAACAGAG...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp CTGAACACAACAGTAAAGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTCTCTGTTCTCTTCACTaGTGGTGTTATCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LNTTVKPTRLLSFTAYSILCSLH*WCYPRS
Trigger: GGACCTTGGATAACACCATCAGTGAAGAGAACAGAG...AATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTACTGTTGTGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCGATTCAGAAAGCATATaGAACTGGGCTGAATATGTA +
Preference number: 4 (lower is better)
Translates to: RSESRRKILSMGTLLWESDSESI*NWAEYV
Trigger: TACATATTCAGCCCAGTTTCATATGCTTTCTGAATC...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGCCCTTGATTTACTGGTaGGGAGCATGGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQPLIYW*GAWGPG
Trigger: ACCTGGACCCCATGCTCCTCACCAGTAAATCAAGGG...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGCTGCTATTTTTCCAATaGTGCCCTTCAGAATACAGG +
Preference number: 4 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMLLFFQ*CPSEYR
Trigger: CCTGTATTCTGAAGGGCATCATTGGAAAAATAGCAG...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTGACAAGAGGATAGGATaGACTCTGGGGAGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: YTPKVSANKSGQNPGERFDKRIG*TLGRQQ
Trigger: TTGCTGCCTCCCCAGAGTTCATCCTATCCTCTTGTC...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR GCA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCATTCCCCTTCCATCATaGTTGTTGCAGTTTTTAATC +
Preference number: 4 (lower is better)
Translates to: RSESRRKILSMGTLLWESIPLPS*LLQFLI
Trigger: GATTAAAAACTGCAACAAGCATGATGGAAGGGGAAT...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTTCTGGAGAAGGCAACTaGCTGGCATCAACTATTATT +
Preference number: 4 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSSGEGN*LASTII
Trigger: AATAATAGTTGATGCCAGGCAGTTGCCTTCTCCAGA...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp CCTTTGGACTGTGTGGATCGACTCTCCACCTGTATTCCAGGTCCTTCCTCTAGCTTGGTATGCTTCTACTaGATCTTTTCTGTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: PLDCVDRLSTCIPGPSSSLVCFY*IFSVSD
Trigger: ATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAA...GCTAGAGGAAGGACCTGGAATACAGGTGGAGAGTCGATCCACACAGTCCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCTTGGTATGCTTCTACTaGATCTTTTCTGTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: RSESRRKILSMGTLLWESLVCFY*IFSVSD
Trigger: ATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAA...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTCTTGTACGCATAGACTaGAGACGCTGGGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: YTPKVSANKSGQNPGERFLVRID*RRWASW
Trigger: CCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAG...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTACTGTTACATGGTTCTaGTGCACAGACTTCAACTAC +
Preference number: 4 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSTVTWF*CTDFNY
Trigger: GTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGT...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGACTGTTACATGGTTCTaGTGCACAGACTTCAACTAC +
Preference number: 4 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMTVTWF*CTDFNY
Trigger: GTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGT...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGAAGATTTTCTTGTCATaGCTCTCCTGGTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMKIFLS*LSWSPV
Trigger: AACAGGAGACCAGGAGAGGCATGACAAGAAAATCTT...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp CTGAACACAACAGTAAAGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTTATAACCGTGGAAACTaGAGTGCTCCTGGATGGAGT +
Preference number: 4 (lower is better)
Translates to: LNTTVKPTRLLSFTAYSIYNRGN*SAPGWS
Trigger: ACTCCATCCAGGAGCACTGCAGTTTCCACGGTTATA...AATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTACTGTTGTGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTTATAACCGTGGAAACTaGAGTGCTCCTGGATGGAGT +
Preference number: 4 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLYNRGN*SAPGWS
Trigger: ACTCCATCCAGGAGCACTGCAGTTTCCACGGTTATA...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp ATACTAAGCCATAAAATTCAGGCCCTTGATTTACTGGTGAGGAGCATGGGGTCCACTGTGCTTACAGTCTaGATGTCACAGACCTCAACC +
Preference number: 4 (lower is better)
Translates to: ILSHKIQALDLLVRSMGSTVLTV*MSQTST
Trigger: GGTTGAGGTCTGTGACATGCAGACTGTAAGCACAGT...GGACCCCATGCTCCTCACCAGTAAATCAAGGGCCTGAATTTTATGGCTTAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTACTGTGCTTACAGTCTaGATGTCACAGACCTCAACC +
Preference number: 4 (lower is better)
Translates to: ISTENSINCCLLTCDWMATVLTV*MSQTST
Trigger: GGTTGAGGTCTGTGACATGCAGACTGTAAGCACAGT...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTAATGCAGAGGAGACCTaGTCAGGTTGGCATGTTGAA +
Preference number: 4 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLNAEET*SGWHVE
Trigger: TTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATT...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGGAGAATTCCATCAACTaGTGTCTGCTGACTTGCGAC +
Preference number: 4 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKENSIN*CLLTCD
Trigger: GTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTC...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTAACTCAGACTGTTACATaGTTCTGCTGCACAGACTTC +
Preference number: 4 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLTQTVT*FCCTDF
Trigger: GAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGT...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTGCGATAAGAGCCATCTaGGCTAATTTCCTCACTTAT +
Preference number: 4 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSAIRAI*ANFLTY
Trigger: ATAAGTGAGGAAATTAGCCCAGATGGCTCTTATCGC...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTAGAAAGATTTTATCCATaGGGACGCTGCTATGGGAGA +
Preference number: 4 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLERFYP*GRCYGR
Trigger: TCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTC...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GGCAACGCATCAAGAAGATACATTACTAAGAGGGTTAAGATATTAATAGAGGGTGCAGGACTTTGGCTCTaGATGCGCAGGGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GNASRRYITKRVKILIEGAGLWL*MRRALE
Trigger: CTCCAGAGCCCTGCGCATCCAGAGCCAAAGTCCTGC...ACCCTCTATTAATATCTTAACCCTCTTAGTAATGTATCTTCTTGATGCGTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp AAGGTTTCTGAGGCCTGTGTTTGTGATACAGGATCCATCTCACACTGTAGTCCTCGTCCACCTCATCTGTaGTGTCTACTTCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: KVSEACVCDTGSISHCSPRPPHL*CLLLHH
Trigger: ATGATGAAGAAGTAGACATCACAGATGAGGTGGACG...AGGACTACAGTGTGAGATGGATCCTGTATCACAAACACAGGCCTCAGAAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp ATACTAAGCCATAAAATTCAGGCCCTTGATTTACTGGTGAGGAGCATGGGGTCCCGTCCACCTCATCTGTaGTGTCTACTTCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: ILSHKIQALDLLVRSMGSRPPHL*CLLLHH
Trigger: ATGATGAAGAAGTAGACATCACAGATGAGGTGGACG...GGACCCCATGCTCCTCACCAGTAAATCAAGGGCCTGAATTTTATGGCTTAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR TCA 90 bp GTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTTGCTCAGAGTCTTCCTCTTCTTCTGGGGTGTTTaGGAAGACAACTCGTCCACC +
Preference number: 4 (lower is better)
Translates to: VKNSSAIKQLVTLLRVFLFFWGV*EDNSST
Trigger: GGTGGACGAGTTGTCTTCTCAAACACCCCAGAAGAA...GAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp CTTCCCTTCCCCAGAGAACCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTAAATACTAATCCCCACTaGGGTTCTTCTAACATCTGC +
Preference number: 4 (lower is better)
Translates to: LPFPREPKSGTIPPSGTLNTNPH*GSSNIC
Trigger: GCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATT...TAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGGTTCTCTGGGGAAGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp CTGAGTTGTCCTATTGAGGCAAGGACTCCAGGTATTTGTACTCCTATAGTTACCCTCTGTTCTCTTCACTaGTGGTGTTATCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LSCPIEARTPGICTPIVTLCSLH*WCYPRS
Trigger: GGACCTTGGATAACACCATCAGTGAAGAGAACAGAG...GGTAACTATAGGAGTACAAATACCTGGAGTCCTTGCCTCAATAGGACAACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp AGAAATGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTGGCATGTTGAAGCCAGGTTATGTGTTTTaGTTAAGGTCACACAGCAAA +
Preference number: 4 (lower is better)
Translates to: RNGRKVMQRRPAQVGMLKPGYVF*LRSHSK
Trigger: TTTGCTGTGTGACCTTAATCAAAACACATAACCTGG...CTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp TCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTATCCAATTCCAGGGCATCCTaGCTATTGGTTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SKSFCKQVRSESRRKILSNSRAS*LLVPPA
Trigger: AGCTGGAGGAACCAATAGTCAGGATGCCCTGGAATT...GGATAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR TCA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATTCAACTGCTGTCTGCTaGCTTGCGACTGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNSTAVC*LATGWL
Trigger: AAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGA...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp CTTCCCTTCCCCAGAGAACCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTAGTGACCTGCTGCCATTaGATGTTTCAATCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LPFPREPKSGTIPPSGTLVTCCH*MFQSCC
Trigger: ACAACAAGATTGAAACATTCAATGGCAGCAGGTCAC...TAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGGTTCTCTGGGGAAGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp ACAGCTATTAGAGCCCCCTGTCTGTTGTTATCTGATCTAAGACACCCTTCCCTTGAGTGGAAATGCTCTTaGCAGAAGATAGAGCACGTA +
Preference number: 4 (lower is better)
Translates to: TAIRAPCLLLSDLRHPSLEWKCS*QKIEHV
Trigger: TACGTGCTCTATCTTCTGTCAAGAGCATTTCCACTC...AAGGGAAGGGTGTCTTAGATCAGATAACAACAGACAGGGGGCTCTAATAGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp CTGCAGACGCTGGGCAAGTTGGTATGCTTCTACTGCATCTTTTCTGTCTCTGATCTGAATCCAGTAGAGTaGCTCCTACTCTCAATGAAA +
Preference number: 4 (lower is better)
Translates to: LQTLGKLVCFYCIFSVSDLNPVE*LLLSMK
Trigger: TTTCATTGAGAGTAGGAGTCACTCTACTGGATTCAG...ATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR GCA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCACATCCAAAATTGATTaGTCCTATCAATTCGAGGTA +
Preference number: 4 (lower is better)
Translates to: RSESRRKILSMGTLLWESTSKID*SYQFEV
Trigger: TACCTCGAATTGATAGGAGCAATCAATTTTGGATGT...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGCTGGGCAAGTTGGTATaGTTCTACTGCATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: KESITAFHRITQLRSLEGLGKLV*FYCIFS
Trigger: AGAAAAGATGCAGTAGAAGCATACCAACTTGCCCAG...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR GCA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGTCCTCAGCAGAGAGATaGTCAAACGTTTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKSSAER*SNVCPS
Trigger: AGAAGGACAAACGTTTGAGCATCTCTCTGCTGAGGA...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR GCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGCACTCCAAAAGTTTCTaGAAACAAGTCAGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMHSKSF*KQVRSE
Trigger: TTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTG...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGCTAAAGCTGACTCACTaGTTCTTCCAATACTCCTTA +
Preference number: 4 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMLKLTH*FFQYSL
Trigger: TAAGGAGTATTGGAAGAAGCAGTGAGTCAGCTTTAG...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTGTTCCTTTGAGACTCTaGCTCCTGAACTTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLVPLRL*LLNFLY
Trigger: ATACAGGAAGTTCAGGAGGCAGAGTCTCAAAGGAAC...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp GTAAACATTATTAAAGGCAGGTGTTCCTTTGAGACTCTGCCTCCTGAACTTCCTTGTTGGGTTGAGAGCTaGAGAGGTTCTGACTGTGCT +
Preference number: 4 (lower is better)
Translates to: VNIIKGRCSFETLPPELPCWVES*RGSDCA
Trigger: AGCACAGTCAGAACCTCTGCAGCTCTCAACCCAACA...AGGAAGTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTTTAATAATGTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp CTTCCCTTCCCCAGAGAACCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTAAATTTTCTGGAGAACTaGTTTGTAGGGCCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LPFPREPKSGTIPPSGTLNFLEN*FVGPLH
Trigger: ATGAAGGGGCCCTACAAAGCAGTTCTCCAGAAAATT...TAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGGTTCTCTGGGGAAGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp TATAAACCATCAACAGTAGAGTTTCATAGTTCAGGTTCCCAGACAGACTCTGATGGTACAAGACTCAGCTaGCTTGGCAGCTGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: YKPSTVEFHSSGSQTDSDGTRLS*LGSWRD
Trigger: GTCTCTCCAGCTGCCAAGGCAGCTGAGTCTTGTACC...ATCAGAGTCTGTCTGGGAACCTGAACTATGAAACTCTACTGTTGATGGTTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp CTGAGTTGTCCTATTGAGGCAAGGACTCCAGGTATTTGTACTCCTATAGTTACCGAGAAGGCAACTGCCTaGCATCAACTATTATTCCCC +
Preference number: 4 (lower is better)
Translates to: LSCPIEARTPGICTPIVTEKATA*HQLLFP
Trigger: GGGGAATAATAGTTGATGCCAGGCAGTTGCCTTCTC...GGTAACTATAGGAGTACAAATACCTGGAGTCCTTGCCTCAATAGGACAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGTTTCAAATAGCGTTCTaGTGTTTTAGCTTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKFQIAF*CFSLAP
Trigger: GGGCGCCAAGCTAAAACACCAGAACGCTATTTGAAA...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CCA 90 bp GTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCAAGACGCTGGGCAAGTTaGTATGCTTCTACTGCATCT +
Preference number: 4 (lower is better)
Translates to: VLHGCFVSTKQSNINSRARRWAS*YASTAS
Trigger: AGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCT...TGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CCA 90 bp CCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTACTGTCCTCTGTCTATAGAATAGACTGCAGACGCTaGGCAAGTTGGTATGCTTCT +
Preference number: 4 (lower is better)
Translates to: PKSGTIPPSGTLLSSVYRIDCRR*ASWYAS
Trigger: AGAAGCATACCAACTTGCCCAGCGTCTGCAGTCTAT...TCTATAGACAGAGGACAGTAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp ACAGCTATTAGAGCCCCCTGTCTGTTGTTATCTGATCTAAGACACCCTTCCCTTACTCAGACTGTTACATaGTTCTGCTGCACAGACTTC +
Preference number: 4 (lower is better)
Translates to: TAIRAPCLLLSDLRHPSLTQTVT*FCCTDF
Trigger: GAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGT...AAGGGAAGGGTGTCTTAGATCAGATAACAACAGACAGGGGGCTCTAATAGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp GTAGTCCTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTATGGGGACGCTGCTATaGGAGAGCCTGTATTTTTCT +
Preference number: 4 (lower is better)
Translates to: VVLYSDCYMVLLHRLQLLMGTLL*ESLYFS
Trigger: AGAAAAATACAGGCTCTCCCATAGCAGCGTCCCCAT...AAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAGGACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTCACTTTCACCTGAAATaGCTCCTGCTTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: TENSINCCLLTCDWMASTHFHLK*LLLFFT
Trigger: AGTGAAGAAAAGCAGGAGCCATTTCAGGTGAAAGTG...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472487.6
CDS-3UTR CCA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGAATATGGTTAAACATTaGCACACAGGGCAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: KESITAFHRITQLRSLEGNMVKH*HTGQGD
Trigger: GTCTCCTTGCCCTGTGTGCCAATGTTTAACCATATT...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTTGCTCAGAGTCTTCCTCAAACTGCAGTGCTCCTaGATGGAGTGGCAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: VKNSSAIKQLVTLLRVFLKLQCS*MEWQRL
Trigger: AAGCCTTTGCCACTCCATCCAGGAGCACTGCAGTTT...GAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATAGGGCATCCTGACTATTaGTTCCTCCAGCTCACCTCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKEECLIDIIGHPDY*FLQLTS
Trigger: TGAGGTGAGCTGGAGGAACCAATAGTCAGGATGCCC...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTTATCAACTGCTGACTTGCGACTaGATGGCTTCAACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LYSDCYMVLLHRLQLLYQLLTCD*MASTQV
Trigger: CACCTGAGTTGAAGCCATCCAGTCGCAAGTCAGCAG...TTGATAAAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR CCA 90 bp AGTTGGACAGTAAGAATCATCTGGTGGTCATTTCTGGCAGCCTTGAGTAGAACCGTAAGAATCATCTGGTaGTCATTTCTGGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SWTVRIIWWSFLAALSRTVRIIW*SFLAAL
Trigger: CAAGGCTGCCAGAAATGACCACCAGATGATTCTTAC...GGTTCTACTCAAGGCTGCCAGAAATGACCACCAGATGATTCTTACTGTCCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp GGCAACGCATCAAGAAGATACATTACTAAGAGGGTTAAGATATTAATAGAGGGTTGGCTTCCTGATCCCTaGGTGGTCAGAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: GNASRRYITKRVKILIEGWLPDP*VVRATA
Trigger: AGCTGTGGCTCTGACCACCCAGGGATCAGGAAGCCA...ACCCTCTATTAATATCTTAACCCTCTTAGTAATGTATCTTCTTGATGCGTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp GGCAACGCATCAAGAAGATACATTACTAAGAGGGTTAAGATATTAATAGAGGGTCAAGGGCTGCTTGCTTaGCTTCCTGATCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GNASRRYITKRVKILIEGQGLLA*LPDPWV
Trigger: CACCCAGGGATCAGGAAGCCAAGCAAGCAGCCCTTG...ACCCTCTATTAATATCTTAACCCTCTTAGTAATGTATCTTCTTGATGCGTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp CTCTTGGCAACAACACTTGTCTGGGGTGAGGGAGGCAGGATTGTTTGGACACAGTGGATAACTAATCATTaGATACCAGCTTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LLATTLVWGEGGRIVWTQWITNH*IPASFC
Trigger: ACAGAAAGAAGCTGGTATCCAATGATTAGTTATCCA...CTGTGTCCAAACAATCCTGCCTCCCTCACCCCAGACAAGTGTTGTTGCCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp AGTTGGACAGTAAGAATCATCTGGTGGTCATTTCTGGCAGCCTTGAGTAGAACCTTTGGGAAGTACTCTTaGCAACAACACTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SWTVRIIWWSFLAALSRTFGKYS*QQHLSG
Trigger: CCCAGACAAGTGTTGTTGCCAAGAGTACTTCCCAAA...GGTTCTACTCAAGGCTGCCAGAAATGACCACCAGATGATTCTTACTGTCCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTGCACAAGGTATCCCATaGCTTCTAGAAAACCTTAAT +
Preference number: 4 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSAQGIP*LLENLN
Trigger: ATTAAGGTTTTCTAGAAGCCATGGGATACCTTGTGC...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR CCA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTTTTAGGCTAGCAAAGTaGCAGGACACAGATGTTAAA +
Preference number: 4 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSFRLAK*QDTDVK
Trigger: TTTAACATCTGTGTCCTGCCACTTTGCTAGCCTAAA...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR TCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGTTATCATCTTCCTTTTaGTCAAGCCAGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMLSSSF*SSQTFS
Trigger: GGAAAAAGTCTGGCTTGATCAAAAGGAAGATGATAA...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR TCA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTTTATGGCCGGTCTTCTaGTTTGGTGTTTCTTTATCC +
Preference number: 4 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLLWPVF*FGVSLS
Trigger: GGATAAAGAAACACCAAATCAGAAGACCGGCCATAA...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGTTCTTCTGGGGTGTTTaGGAAGACAACTCGTCCACC +
Preference number: 4 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQFFWGV*EDNSST
Trigger: GGTGGACGAGTTGTCTTCTCAAACACCCCAGAAGAA...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR TCA 90 bp CTGCAGACGCTGGGCAAGTTGGTATGCTTCTACTGCATCTTTTCTGTCTCTGATCATCTTTTCTGTCTCTaGTTCGTACTTTGTCAACTG +
Preference number: 4 (lower is better)
Translates to: LQTLGKLVCFYCIFSVSDHLFCL*FVLCQL
Trigger: CAGTTGACAAAGTACGAATCAGAGACAGAAAAGATG...ATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR TCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTAATACTAATCCCCACTaGGGTTCTTCTAACATCTGC +
Preference number: 4 (lower is better)
Translates to: ISTENSINCCLLTCDWMANTNPH*GSSNIC
Trigger: GCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATT...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGAGTTCAGGGAAGAAATaGCTTAGAGACATAGTCCAA +
Preference number: 4 (lower is better)
Translates to: KESITAFHRITQLRSLEGSSGKK*LRDIVQ
Trigger: TTGGACTATGTCTCTAAGTCATTTCTTCCCTGAACT...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTAAGTTCAGGGAAGAAATaGCTTAGAGACATAGTCCAA +
Preference number: 4 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLSSGKK*LRDIVQ
Trigger: TTGGACTATGTCTCTAAGTCATTTCTTCCCTGAACT...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp TTGGGATCAGCACGTCCCCTTAAACATGATGGTGTCCATGCCTTTGTCCCTTTAAGTTCAGGGAAGAAATaGCTTAGAGACATAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LGSARPLKHDGVHAFVPLSSGKK*LRDIVQ
Trigger: TTGGACTATGTCTCTAAGTCATTTCTTCCCTGAACT...TAAAGGGACAAAGGCATGGACACCATCATGTTTAAGGGGACGTGCTGATCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR TCA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTGATTCAGAAAGCATATaGAACTGGGCTGAATATGTA +
Preference number: 4 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSDSESI*NWAEYV
Trigger: TACATATTCAGCCCAGTTTCATATGCTTTCTGAATC...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGCCAGGTTATGTGTTTTaGTTAAGGTCACACAGCAAA +
Preference number: 4 (lower is better)
Translates to: KESITAFHRITQLRSLEGPGYVF*LRSHSK
Trigger: TTTGCTGTGTGACCTTAATCAAAACACATAACCTGG...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGAAGACAGAATCAGGATaGAGACACCTGCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKKTESG*RHLHVF
Trigger: AAAGACATGCAGGTGTCTTCATCCTGATTCTGTCTT...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp CTGAACACAACAGTAAAGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTCTGCTATTTTTCCAATaGTGCCCTTCAGAATACAGG +
Preference number: 4 (lower is better)
Translates to: LNTTVKPTRLLSFTAYSILLFFQ*CPSEYR
Trigger: CCTGTATTCTGAAGGGCATCATTGGAAAAATAGCAG...AATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTACTGTTGTGTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp TGTCCTATTGAGGCAAGGACTCCAGGTATTTGTACTCCTATAGTTACCAGTCATACTGAGTTGTCCTATTaGGGCAAGGACTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: CPIEARTPGICTPIVTSHTELSY*GKDSRY
Trigger: ATACCTGGAGTCCTTGCCTCAATAGGACAACTCAGT...ATGACTGGTAACTATAGGAGTACAAATACCTGGAGTCCTTGCCTCAATAGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp ACAGCTATTAGAGCCCCCTGTCTGTTGTTATCTGATCTAAGACACCCTTCCCTTTCTGGAGAAGGCAACTaGCTGGCATCAACTATTATT +
Preference number: 4 (lower is better)
Translates to: TAIRAPCLLLSDLRHPSLSGEGN*LASTII
Trigger: AATAATAGTTGATGCCAGGCAGTTGCCTTCTCCAGA...AAGGGAAGGGTGTCTTAGATCAGATAACAACAGACAGGGGGCTCTAATAGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGCTGGGCAAGTTGGTATaGTTCTACTGCATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKLGKLV*FYCIFS
Trigger: AGAAAAGATGCAGTAGAAGCATACCAACTTGCCCAG...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR GCA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGGTTACATGGTTCTGCTaGACAGACTTCAACTACTTT +
Preference number: 4 (lower is better)
Translates to: KESITAFHRITQLRSLEGVTWFC*TDFNYF
Trigger: AAAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAAC...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTAGTTACATGGTTCTGCTaGACAGACTTCAACTACTTT +
Preference number: 4 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLVTWFC*TDFNYF
Trigger: AAAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAAC...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTCATCCCAATGAACTTTaGACCTCCTCTGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSHPNEL*TSSGEV
Trigger: TACTTCTCCAGAGGAGGTGCAAAGTTCATTGGGATG...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTACACTCCAAAAGTTTCTaGAAACAAGTCAGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLHSKSF*KQVRSE
Trigger: TTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTG...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGAGCAATTGGTCACTTTaGTCAGAGTCTTCCTCATAC +
Preference number: 4 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKSNWSL*SESSSY
Trigger: GTATGAGGAAGACTCTGAGCAAAGTGACCAATTGCT...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTAGCAATTGGTCACTTTaGTCAGAGTCTTCCTCATAC +
Preference number: 4 (lower is better)
Translates to: ISTENSINCCLLTCDWMASNWSL*SESSSY
Trigger: GTATGAGGAAGACTCTGAGCAAAGTGACCAATTGCT...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp GTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCAGTTCCTTTGAGACTCTaGCTCCTGAACTTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: VLHGCFVSTKQSNINSRAVPLRL*LLNFLY
Trigger: ATACAGGAAGTTCAGGAGGCAGAGTCTCAAAGGAAC...TGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp AAGGTTTCTGAGGCCTGTGTTTGTGATACAGGATCCATCTCACACTGTAGTCCTAGCTTCATGGAAACATaGATGGTCTGTCCATCTCTA +
Preference number: 4 (lower is better)
Translates to: KVSEACVCDTGSISHCSPSFMET*MVCPSL
Trigger: TAGAGATGGACAGACCATGCATGTTTCCATGAAGCT...AGGACTACAGTGTGAGATGGATCCTGTATCACAAACACAGGCCTCAGAAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR GCA 90 bp AGTTGGACAGTAAGAATCATCTGGTGGTCATTTCTGGCAGCCTTGAGTAGAACCCTTGACAAGGCTTTCTaGAAACAAGTCAGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: SWTVRIIWWSFLAALSRTLDKAF*KQVRSE
Trigger: TTCTGACCTGACTTGTTTGCAGAAAGCCTTGTCAAG...GGTTCTACTCAAGGCTGCCAGAAATGACCACCAGATGATTCTTACTGTCCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp TGTCCTATTGAGGCAAGGACTCCAGGTATTTGTACTCCTATAGTTACCAGTCATAGACGCTGGGCAAGTTaGTATGCTTCTACTGCATCT +
Preference number: 4 (lower is better)
Translates to: CPIEARTPGICTPIVTSHRRWAS*YASTAS
Trigger: AGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCT...ATGACTGGTAACTATAGGAGTACAAATACCTGGAGTCCTTGCCTCAATAGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTAGACGCTGGGCAAGTTaGTATGCTTCTACTGCATCT +
Preference number: 4 (lower is better)
Translates to: YTPKVSANKSGQNPGERFRRWAS*YASTAS
Trigger: AGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCT...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CTTCTAGAAAACCTTAATTCTTGCACCAGAGGATTTGATAAGAGCCATCTGGGCATAGACTGCAGACGCTaGGCAAGTTGGTATGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLENLNSCTRGFDKSHLGIDCRR*ASWYAS
Trigger: AGAAGCATACCAACTTGCCCAGCGTCTGCAGTCTAT...GCCCAGATGGCTCTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTCTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR CCA 90 bp CACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTAATAGACTGCAGACGCTaGGCAAGTTGGTATGCTTCT +
Preference number: 4 (lower is better)
Translates to: HSKSFCKQVRSESRRKILIDCRR*ASWYAS
Trigger: AGAAGCATACCAACTTGCCCAGCGTCTGCAGTCTAT...TAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATTATTTCGATTATAGGGACTAACAATCATCCCAATGAACTTTGCACCTCCTCTACACCAGTTTCCCCATaGGTCTCGGACCCTACGTCT +
Preference number: 4 (lower is better)
Translates to: IISIIGTNNHPNELCTSSTPVSP*VSDPTS
Trigger: AGACGTAGGGTCCGAGACCCATGGGGAAACTGGTGT...AGAGGAGGTGCAAAGTTCATTGGGATGATTGTTAGTCCCTATAATCGAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATACTAGAACACCGTGGTaGACCCTGGTTTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNTRTPW*TLVCRT
Trigger: TGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGT...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGGAGGACATAGACATCATATGTaGCCTGAAAAGCCAAAATTA +
Preference number: 4 (lower is better)
Translates to: TIGSSSSPHQDPGREMGGHRHHM*PEKPKL
Trigger: TAATTTTGGCTTTTCAGGCCACATATGATGTCTATG...TCCTCCCATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTAGGTTTCCTGACTTTTaGTATAGTTCCTCTTACACT +
Preference number: 4 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSRFPDF*YSSSYT
Trigger: AGTGTAAGAGGAACTATACCAAAAGTCAGGAAACCT...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGAGGTTTCCTGACTTTTaGTATAGTTCCTCTTACACT +
Preference number: 4 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMRFPDF*YSSSYT
Trigger: AGTGTAAGAGGAACTATACCAAAAGTCAGGAAACCT...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GTAAACATTATTAAAGGCAGGTGTTCCTTTGAGACTCTGCCTCCTGAACTTCCTCGCAACTTCGGAGCTTaGAAGGGAATACTAAGCCAT +
Preference number: 4 (lower is better)
Translates to: VNIIKGRCSFETLPPELPRNFGA*KGILSH
Trigger: ATGGCTTAGTATTCCCTTCCAAGCTCCGAAGTTGCG...AGGAAGTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTTTAATAATGTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTCGCAACTTCGGAGCTTaGAAGGGAATACTAAGCCAT +
Preference number: 4 (lower is better)
Translates to: YTPKVSANKSGQNPGERFRNFGA*KGILSH
Trigger: ATGGCTTAGTATTCCCTTCCAAGCTCCGAAGTTGCG...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR CCA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGAATATGGTTAAACATTaGCACACAGGGCAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKNMVKH*HTGQGD
Trigger: GTCTCCTTGCCCTGTGTGCCAATGTTTAACCATATT...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CATGCCTCTCCTGGTCTCCTGTTAGATTTATTAATCAGTAGTTCTAAACCATATCTTCTCCAAGGACTGTaGTGGTGGGAGAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: HASPGLLLDLLISSSKPYLLQGL*WWEKGT
Trigger: TGTCCCCTTCTCCCACCACCACAGTCCTTGGAGAAG...ATATGGTTTAGAACTACTGATTAATAAATCTAACAGGAGACCAGGAGAGGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATCTTGTCTTTTCAAATACTAATCCCCACTGAGGTTCTTCTAACATCTGCTGTACTTCTCCAAGGACTGTaGTGGTGGGAGAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: ILSFQILIPTEVLLTSAVLLQGL*WWEKGT
Trigger: TGTCCCCTTCTCCCACCACCACAGTCCTTGGAGAAG...TACAGCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATTTGAAAAGACAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR CCA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATAGGGAAGGAATGGTATaGACAGAAGACTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNREGMV*TEDWEQ
Trigger: CTGCTCCCAGTCTTCTGTCCATACCATTCCTTCCCT...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GGCAACGCATCAAGAAGATACATTACTAAGAGGGTTAAGATATTAATAGAGGGTCCCTTCATTCACTGGTaGCAAGGGCTGCTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GNASRRYITKRVKILIEGPFIHW*QGLLAW
Trigger: CCAAGCAAGCAGCCCTTGCCACCAGTGAATGAAGGG...ACCCTCTATTAATATCTTAACCCTCTTAGTAATGTATCTTCTTGATGCGTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTTATCGTCCACTTTACTaGGTAACTGGCTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSYRPLY*VTGWFC
Trigger: ACAAAACCAGCCAGTTACTCAGTAAAGTGGACGATA...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp GTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCATTATGGCCGGTCTTCTaGTTTGGTGTTTCTTTATCC +
Preference number: 4 (lower is better)
Translates to: VLHGCFVSTKQSNINSRALWPVF*FGVSLS
Trigger: GGATAAAGAAACACCAAATCAGAAGACCGGCCATAA...TGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR TCA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTCGTCCACCTCATCTGTaGTGTCTACTTCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: YTPKVSANKSGQNPGERFRPPHL*CLLLHH
Trigger: ATGATGAAGAAGTAGACATCACAGATGAGGTGGACG...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTCATCTTTTCTGTCTCTaGTTCGTACTTTGTCAACTG +
Preference number: 4 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLHLFCL*FVLCQL
Trigger: CAGTTGACAAAGTACGAATCAGAGACAGAAAAGATG...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTAGTTCAGGGAAGAAATaGCTTAGAGACATAGTCCAA +
Preference number: 4 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLSSGKK*LRDIVQ
Trigger: TTGGACTATGTCTCTAAGTCATTTCTTCCCTGAACT...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp CAGTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTCTCTGTTCTCTTCACTaGTGGTGTTATCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: QLRSKIHVFHTLSYACFSLCSLH*WCYPRS
Trigger: GGACCTTGGATAACACCATCAGTGAAGAGAACAGAG...AGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR TCA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTTCTGCCATAGAAACATaGGCATGCAAATCCATTATT +
Preference number: 4 (lower is better)
Translates to: TENSINCCLLTCDWMASTSAIET*ACKSII
Trigger: AATAATGGATTTGCATGCTCATGTTTCTATGGCAGA...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472487.6
CDS-3UTR TCA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTACTGAATTTCAATAAATaGGGCAGCATTGACTGCTTA +
Preference number: 4 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLLNFNK*GSIDCL
Trigger: TAAGCAGTCAATGCTGCCTCATTTATTGAAATTCAG...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATACCCAAATCACAAAGTTaGGACAAGAACCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKEECLIDIIPKSQS*DKNQVT
Trigger: GGTGACCTGGTTCTTGTCTCAACTTTGTGATTTGGG...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp GTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTTGCTCAGAGTCTTCCTCAAGGCCCCAAACTCTTaGCAAGTATCATCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: VKNSSAIKQLVTLLRVFLKAPNS*QVSSLR
Trigger: TCTCAAGGATGATACTTGTCAAGAGTTTGGGGCCTT...GAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR TCA 90 bp GGCAACGCATCAAGAAGATACATTACTAAGAGGGTTAAGATATTAATAGAGGGTCATTTCTGGCAGCCTTaGGTAGAACCCAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GNASRRYITKRVKILIEGHFWQP*VEPRAA
Trigger: TGCAGCTCTGGGTTCTACTCAAGGCTGCCAGAAATG...ACCCTCTATTAATATCTTAACCCTCTTAGTAATGTATCTTCTTGATGCGTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp GGCAACGCATCAAGAAGATACATTACTAAGAGGGTTAAGATATTAATAGAGGGTGGACACAGGAAAAGCTaGACAGAGGCCATCGCCAAT +
Preference number: 4 (lower is better)
Translates to: GNASRRYITKRVKILIEGGHRKS*TEAIAN
Trigger: ATTGGCGATGGCCTCTGTTCAGCTTTTCCTGTGTCC...ACCCTCTATTAATATCTTAACCCTCTTAGTAATGTATCTTCTTGATGCGTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp CTTCCCTTCCCCAGAGAACCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTAGGGATGCCATTAAGATaGATGAAACAAATTGACACA +
Preference number: 4 (lower is better)
Translates to: LPFPREPKSGTIPPSGTLGMPLR*MKQIDT
Trigger: TGTGTCAATTTGTTTCATTCATCTTAATGGCATCCC...TAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGGTTCTCTGGGGAAGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp CTTCTGAGCCCAAACTCATTCCACCTCCCTAGAAGAGCTAATCTAAGACTAGACTCACTTGTAAAACAGTaGGGCTTCCAATTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LLSPNSFHLPRRANLRLDSLVKQ*GFQLAL
Trigger: CAAAGCTAATTGGAAGCCGCACTGTTTTACAAGTGA...GTCTAGTCTTAGATTAGCTCTTCTAGGGAGGTGGAATGAGTTTGGGCTCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR GCA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTATTGGTATGCTTCTACTaGATCTTTTCTGTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLLVCFY*IFSVSD
Trigger: ATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAA...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp CACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTATCCTCAGCAGAGAGATaGTCAAACGTTTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: HSKSFCKQVRSESRRKILSSAER*SNVCPS
Trigger: AGAAGGACAAACGTTTGAGCATCTCTCTGCTGAGGA...TAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000665648.1
CDS-3UTR GCA 90 bp CTGAACACAACAGTAAAGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGTTACATGGTTCTGCTaGACAGACTTCAACTACTTT +
Preference number: 4 (lower is better)
Translates to: LNTTVKPTRLLSFTAYSIVTWFC*TDFNYF
Trigger: AAAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAAC...AATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTACTGTTGTGTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGAAAGGAATCAATCACTaGCTTTCACAGAATCACGCA +
Preference number: 4 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKKGINH*LSQNHA
Trigger: TGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTTT...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATATATAACCGTGGAAACTaGAGTGCTCCTGGATGGAGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKEECLIDIIYNRGN*SAPGWS
Trigger: ACTCCATCCAGGAGCACTGCAGTTTCCACGGTTATA...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATAAATGCAGAGGAGACCTaGTCAGGTTGGCATGTTGAA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKEECLIDIINAEET*SGWHVE
Trigger: TTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATT...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp GGAATGGTTAGAAAACTAACCATTTCAAGTCCCAGAATATCAGAGTTCTGCATGAGGACAATCTGGCCATaGACCTCAGTATCCACCACA +
Preference number: 4 (lower is better)
Translates to: GMVRKLTISSPRISEFCMRTIWP*TSVSTT
Trigger: TGTGGTGGATACTGAGGTGCATGGCCAGATTGTCCT...CATGCAGAACTCTGATATTCTGGGACTTGAAATGGTTAGTTTTCTAACCATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp TGGCTTCTAGAAAACCTTAATTCTTGCACCAGAGGATTTGATAAGAGCCATCTGGAGAAGGCAACTGCCTaGCATCAACTATTATTCCCC +
Preference number: 4 (lower is better)
Translates to: WLLENLNSCTRGFDKSHLEKATA*HQLLFP
Trigger: GGGGAATAATAGTTGATGCCAGGCAGTTGCCTTCTC...CAGATGGCTCTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTCTAGAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR CCA 90 bp GTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTTCGAGAAGGCAACTGCCTaGCATCAACTATTATTCCCC +
Preference number: 4 (lower is better)
Translates to: VKIQNTRLPYSVLRLLFFEKATA*HQLLFP
Trigger: GGGGAATAATAGTTGATGCCAGGCAGTTGCCTTCTC...GAAGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR CCA 90 bp CAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTATCCATAGACGCTGGGCAAGTTaGTATGCTTCTACTGCATCT +
Preference number: 4 (lower is better)
Translates to: QKFLQTSQVRIPAKDFIHRRWAS*YASTAS
Trigger: AGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCT...ATGGATAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATAATAGACTGCAGACGCTaGGCAAGTTGGTATGCTTCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKEECLIDIIIDCRR*ASWYAS
Trigger: AGAAGCATACCAACTTGCCCAGCGTCTGCAGTCTAT...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AAGGTTTCTGAGGCCTGTGTTTGTGATACAGGATCCATCTCACACTGTAGTCCTTTACAAGGTATCAGTTaGAAGGGATCAAACGAGCTT +
Preference number: 4 (lower is better)
Translates to: KVSEACVCDTGSISHCSPLQGIS*KGSNEL
Trigger: AAGCTCGTTTGATCCCTTCCAACTGATACCTTGTAA...AGGACTACAGTGTGAGATGGATCCTGTATCACAAACACAGGCCTCAGAAACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTACTCAGACTGTTACATaGTTCTGCTGCACAGACTTC +
Preference number: 4 (lower is better)
Translates to: TLQKFLQTSQVRIPAKDFTQTVT*FCCTDF
Trigger: GAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGT...AAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTTGCTCAGAGTCTTCCTCACTCAGACTGTTACATaGTTCTGCTGCACAGACTTC +
Preference number: 4 (lower is better)
Translates to: VKNSSAIKQLVTLLRVFLTQTVT*FCCTDF
Trigger: GAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGT...GAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTACTGTCCTCTGTCTATAGAGCGATAAGAGCCATCTaGGCTAATTTCCTCACTTAT +
Preference number: 4 (lower is better)
Translates to: PKSGTIPPSGTLLSSVYRAIRAI*ANFLTY
Trigger: ATAAGTGAGGAAATTAGCCCAGATGGCTCTTATCGC...TCTATAGACAGAGGACAGTAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp TTCTCCAAAAACTTAAGAAGAGTGACACACTATAGTACACGGGGTATTAAGCAACACCGTGGTGGACCCTaGTTTGCAGAACACTCTGAT +
Preference number: 4 (lower is better)
Translates to: FSKNLRRVTHYSTRGIKQHRGGP*FAEHSD
Trigger: ATCAGAGTGTTCTGCAAACCAGGGTCCACCACGGTG...TTGCTTAATACCCCGTGTACTATAGTGTGTCACTCTTCTTAAGTTTTTGGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR CCA 90 bp ATTAGGATCAAAAGCAGGATGAGAATGATACCATCCAATAACACTGAAGCCTCTACTAGAACACCGTGGTaGACCCTGGTTTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: IRIKSRMRMIPSNNTEASTRTPW*TLVCRT
Trigger: TGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGT...AGAGGCTTCAGTGTTATTGGATGGTATCATTCTCATCCTGCTTTTGATCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTTGTCATGCCTCTCCTaGTCTCCTGTTAGATTTATT +
Preference number: 4 (lower is better)
Translates to: ISTENSINCCLLTCDWMALSCLS*SPVRFI
Trigger: AATAAATCTAACAGGAGACCAGGAGAGGCATGACAA...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CTGAGTTGTCCTATTGAGGCAAGGACTCCAGGTATTTGTACTCCTATAGTTACCCACTTTCACCTGAAATaGCTCCTGCTTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: LSCPIEARTPGICTPIVTHFHLK*LLLFFT
Trigger: AGTGAAGAAAAGCAGGAGCCATTTCAGGTGAAAGTG...GGTAACTATAGGAGTACAAATACCTGGAGTCCTTGCCTCAATAGGACAACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGCATAGACATCATATGTaGCCTGAAAAGCCAAAATTA +
Preference number: 4 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMHRHHM*PEKPKL
Trigger: TAATTTTGGCTTTTCAGGCCACATATGATGTCTATG...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTAATATGGTTAAACATTaGCACACAGGGCAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSNMVKH*HTGQGD
Trigger: GTCTCCTTGCCCTGTGTGCCAATGTTTAACCATATT...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR CCA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGGAGATCCTCGCAATATaGCTTAGATTAGCAAATATG +
Preference number: 4 (lower is better)
Translates to: KESITAFHRITQLRSLEGEILAI*LRLANM
Trigger: CATATTTGCTAATCTAAGCCATATTGCGAGGATCTC...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTACAATGTGGGTACCTGTaGTTGCAAAATTGTTTTAAG +
Preference number: 4 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLQCGYL*LQNCFK
Trigger: CTTAAAACAATTTTGCAACCACAGGTACCCACATTG...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATGTAGTGCCAGCAATGTaGGTACCTGTGGTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNVVPAM*VPVVAK
Trigger: TTTTGCAACCACAGGTACCCACATTGCTGGCACTAC...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATACTAAGCCATAAAATTCAGGCCCTTGATTTACTGGTGAGGAGCATGGGGTCCTTTCCCTTTCAAGTGTaGCACGAGTTTCAAAACTAC +
Preference number: 4 (lower is better)
Translates to: ILSHKIQALDLLVRSMGSFPFQV*HEFQNY
Trigger: GTAGTTTTGAAACTCGTGCCACACTTGAAAGGGAAA...GGACCCCATGCTCCTCACCAGTAAATCAAGGGCCTGAATTTTATGGCTTAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGTCATGGAAACATGCATaGTCTGTCCATCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: KESITAFHRITQLRSLEGSWKHA*SVHLYF
Trigger: AAAATAGAGATGGACAGACCATGCATGTTTCCATGA...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTTGCTCATGTGTTACATaGCTGTTTTGTGAGCACAAA +
Preference number: 4 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLCSCVT*LFCEHK
Trigger: TTTGTGCTCACAAAACAGCCATGTAACACATGAGCA...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTGCTCATGTGTTACATaGCTGTTTTGTGAGCACAAA +
Preference number: 4 (lower is better)
Translates to: ISTENSINCCLLTCDWMACSCVT*LFCEHK
Trigger: TTTGTGCTCACAAAACAGCCATGTAACACATGAGCA...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CATGCCTCTCCTGGTCTCCTGTTAGATTTATTAATCAGTAGTTCTAAACCATATCTGCTGACTTGCGACTaGATGGCTTCAACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: HASPGLLLDLLISSSKPYLLTCD*MASTQV
Trigger: CACCTGAGTTGAAGCCATCCAGTCGCAAGTCAGCAG...ATATGGTTTAGAACTACTGATTAATAAATCTAACAGGAGACCAGGAGAGGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTAGATATAAAAGGCATTaGCAGGATTTGAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSRYKRH*QDLNPG
Trigger: GCCTGGGTTCAAATCCTGCCAATGCCTTTTATATCT...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR TCA 90 bp CATGCCTCTCCTGGTCTCCTGTTAGATTTATTAATCAGTAGTTCTAAACCATATTTCTTCTGGGGTGTTTaGGAAGACAACTCGTCCACC +
Preference number: 4 (lower is better)
Translates to: HASPGLLLDLLISSSKPYFFWGV*EDNSST
Trigger: GGTGGACGAGTTGTCTTCTCAAACACCCCAGAAGAA...ATATGGTTTAGAACTACTGATTAATAAATCTAACAGGAGACCAGGAGAGGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp ACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTAATACTAATCCCCACTaGGGTTCTTCTAACATCTGC +
Preference number: 4 (lower is better)
Translates to: TLQKFLQTSQVRIPAKDFNTNPH*GSSNIC
Trigger: GCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATT...AAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp TCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTATCCAATACTAATCCCCACTaGGGTTCTTCTAACATCTGC +
Preference number: 4 (lower is better)
Translates to: SKSFCKQVRSESRRKILSNTNPH*GSSNIC
Trigger: GCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATT...GGATAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp GTAGTCCTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTAGTTCAGGGAAGAAATaGCTTAGAGACATAGTCCAA +
Preference number: 4 (lower is better)
Translates to: VVLYSDCYMVLLHRLQLLSSGKK*LRDIVQ
Trigger: TTGGACTATGTCTCTAAGTCATTTCTTCCCTGAACT...AAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAGGACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp AGTTGGACAGTAAGAATCATCTGGTGGTCATTTCTGGCAGCCTTGAGTAGAACCCTCTGTTCTCCAAGATaGATCAAGATAGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: SWTVRIIWWSFLAALSRTLCSPR*IKIVIF
Trigger: AAAGATCACTATCTTGATTCATCTTGGAGAACAGAG...GGTTCTACTCAAGGCTGCCAGAAATGACCACCAGATGATTCTTACTGTCCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp CTGAACACAACAGTAAAGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTCTCTGTTCTCCAAGATaGATCAAGATAGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: LNTTVKPTRLLSFTAYSILCSPR*IKIVIF
Trigger: AAAGATCACTATCTTGATTCATCTTGGAGAACAGAG...AATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTACTGTTGTGTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTCTGAATTTCAATAAATaGGGCAGCATTGACTGCTTA +
Preference number: 4 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLLNFNK*GSIDCL
Trigger: TAAGCAGTCAATGCTGCCTCATTTATTGAAATTCAG...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp GTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCACCAGGTTATGTGTTTTaGTTAAGGTCACACAGCAAA +
Preference number: 4 (lower is better)
Translates to: VLHGCFVSTKQSNINSRAPGYVF*LRSHSK
Trigger: TTTGCTGTGTGACCTTAATCAAAACACATAACCTGG...TGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCATCAACTGCTGTCTGCTaGCTTGCGACTGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: IISVTTHPYLIYSHKQISSTAVC*LATGWL
Trigger: AAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGA...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp CTGAACACAACAGTAAAGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTTTACTGAATTTCTACTaGGAATTCCATCAACTGCTG +
Preference number: 4 (lower is better)
Translates to: LNTTVKPTRLLSFTAYSILLNFY*EFHQLL
Trigger: CAGCAGTTGATGGAATTCTCAGTAGAAATTCAGTAA...AATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTACTGTTGTGTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp GTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTTGCTCAGAGTCTTCCTCTGGGGGAATAGCACATaGAGCCATTTAAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: VKNSSAIKQLVTLLRVFLWGNST*SHLRKG
Trigger: ACCTTTTCTTAAATGGCTTCATGTGCTATTCCCCCA...GAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR TCA 90 bp CTTCTAGAAAACCTTAATTCTTGCACCAGAGGATTTGATAAGAGCCATCTGGGCAAAGTGCCATTTACATaGCAATTCTACGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: LLENLNSCTRGFDKSHLGKVPFT*QFYAWH
Trigger: GTGCCATGCGTAGAATTGTCATGTAAATGGCACTTT...GCCCAGATGGCTCTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTCTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR GCA 90 bp GTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCATCACTTGTAAAACAGTaGGGCTTCCAATTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VLHGCFVSTKQSNINSRASLVKQ*GFQLAL
Trigger: CAAAGCTAATTGGAAGCCGCACTGTTTTACAAGTGA...TGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR GCA 90 bp AGTTCCTCTTACACTCTCAGCCCTCAAACTAATTGTTTTATAAGCTATACTTCACTTGTACGCATAGACTaGAGACGCTGGGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: SSSYTLSPQTNCFISYTSLVRID*RRWASW
Trigger: CCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAG...TGAAGTATAGCTTATAAAACAATTAGTTTGAGGGCTGAGAGTGTAAGAGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR GCA 90 bp GTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTTGCTCAGAGTCTTCCTCACTGTTACATGGTTCTaGTGCACAGACTTCAACTAC +
Preference number: 4 (lower is better)
Translates to: VKNSSAIKQLVTLLRVFLTVTWF*CTDFNY
Trigger: GTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGT...GAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATCATCCCAATGAACTTTaGACCTCCTCTGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNHPNEL*TSSGEV
Trigger: TACTTCTCCAGAGGAGGTGCAAAGTTCATTGGGATG...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp ATTGGTCACTTTGCTCAGAGTCTTCCTCATACACTCCAAAAGTTTCTGCAAACACATCCCAATGAACTTTaGACCTCCTCTGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: IGHFAQSLPHTLQKFLQTHPNEL*TSSGEV
Trigger: TACTTCTCCAGAGGAGGTGCAAAGTTCATTGGGATG...TGTTTGCAGAAACTTTTGGAGTGTATGAGGAAGACTCTGAGCAAAGTGACCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTCACTCCAAAAGTTTCTaGAAACAAGTCAGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSHSKSF*KQVRSE
Trigger: TTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTG...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp TCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTATCCAGCAATTGGTCACTTTaGTCAGAGTCTTCCTCATAC +
Preference number: 4 (lower is better)
Translates to: SKSFCKQVRSESRRKILSSNWSL*SESSSY
Trigger: GTATGAGGAAGACTCTGAGCAAAGTGACCAATTGCT...GGATAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTAAAGGAATCAATCACTaGCTTTCACAGAATCACGCA +
Preference number: 4 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSKGINH*LSQNHA
Trigger: TGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTTT...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR GCA 90 bp CTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTTATCAAGTTCCTTTGAGACTCTaGCTCCTGAACTTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: LYSDCYMVLLHRLQLLYQVPLRL*LLNFLY
Trigger: ATACAGGAAGTTCAGGAGGCAGAGTCTCAAAGGAAC...TTGATAAAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR GCA 90 bp TATTTAGCTTGTGTGTCAATATCTCGTAAGGAAGGATTAGGATCAAAAGCAGGATGTTGGGTTGAGAGCTaGAGAGGTTCTGACTGTGCT +
Preference number: 4 (lower is better)
Translates to: YLACVSISRKEGLGSKAGCWVES*RGSDCA
Trigger: AGCACAGTCAGAACCTCTGCAGCTCTCAACCCAACA...TCCTGCTTTTGATCCTAATCCTTCCTTACGAGATATTGACACACAAGCTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR CCA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGTTAGCTTTGAAATTTTaGTCCATCTTCGGCCAAATT +
Preference number: 4 (lower is better)
Translates to: KESITAFHRITQLRSLEGLALKF*SIFGQI
Trigger: AATTTGGCCGAAGATGGACCAAAATTTCAAAGCTAA...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CCA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTTTCTATTTCCTGTTCTaGTGGCTTAAGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSFYFLF*WLKLFF
Trigger: GAAGAAGAGCTTAAGCCACCAGAACAGGAAATAGAA...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTTATCAATTTCAAATAGCGTTCTaGTGTTTTAGCTTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: LYSDCYMVLLHRLQLLYQFQIAF*CFSLAP
Trigger: GGGCGCCAAGCTAAAACACCAGAACGCTATTTGAAA...TTGATAAAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATTAGGATCAAAAGCAGGATGAGAATGATACCATCCAATAACACTGAAGCCTCTATAGACTGCAGACGCTaGGCAAGTTGGTATGCTTCT +
Preference number: 4 (lower is better)
Translates to: IRIKSRMRMIPSNNTEASIDCRR*ASWYAS
Trigger: AGAAGCATACCAACTTGCCCAGCGTCTGCAGTCTAT...AGAGGCTTCAGTGTTATTGGATGGTATCATTCTCATCCTGCTTTTGATCCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTACTGTCCTCTGTCTATAGATTACAAGGTATCAGTTaGAAGGGATCAAACGAGCTT +
Preference number: 4 (lower is better)
Translates to: PKSGTIPPSGTLLSSVYRLQGIS*KGSNEL
Trigger: AAGCTCGTTTGATCCCTTCCAACTGATACCTTGTAA...TCTATAGACAGAGGACAGTAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp ATTAGGATCAAAAGCAGGATGAGAATGATACCATCCAATAACACTGAAGCCTCTATGGGGACGCTGCTATaGGAGAGCCTGTATTTTTCT +
Preference number: 4 (lower is better)
Translates to: IRIKSRMRMIPSNNTEASMGTLL*ESLYFS
Trigger: AGAAAAATACAGGCTCTCCCATAGCAGCGTCCCCAT...AGAGGCTTCAGTGTTATTGGATGGTATCATTCTCATCCTGCTTTTGATCCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTATCTCAGCAGAATATATaGAAAGAATGGAAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLSQQNI*KEWKCF
Trigger: AAAGCACTTCCATTCTTTCCATATATTCTGCTGAGA...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTTTGTCATGCCTCTCCTaGTCTCCTGTTAGATTTATT +
Preference number: 4 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSLSCLS*SPVRFI
Trigger: AATAAATCTAACAGGAGACCAGGAGAGGCATGACAA...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGCAATGTGGGTACCTGTaGTTGCAAAATTGTTTTAAG +
Preference number: 4 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKQCGYL*LQNCFK
Trigger: CTTAAAACAATTTTGCAACCACAGGTACCCACATTG...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCATGGAAACATGCATaGTCTGTCCATCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: ISTENSINCCLLTCDWMASWKHA*SVHLYF
Trigger: AAAATAGAGATGGACAGACCATGCATGTTTCCATGA...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AGTTCCTCTTACACTCTCAGCCCTCAAACTAATTGTTTTATAAGCTATACTTCACACAGTCTCCTCTGTTaGGTTGAGAGCTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: SSSYTLSPQTNCFISYTSHSLLC*VESCRG
Trigger: ACCTCTGCAGCTCTCAACCCAACAGAGGAGACTGTG...TGAAGTATAGCTTATAAAACAATTAGTTTGAGGGCTGAGAGTGTAAGAGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCATGCTCATGTGTTACATaGCTGTTTTGTGAGCACAAA +
Preference number: 4 (lower is better)
Translates to: VLHGCFVSTKQSNINSRACSCVT*LFCEHK
Trigger: TTTGTGCTCACAAAACAGCCATGTAACACATGAGCA...TGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
3UTR CAA 72 bp GCTTCTACTGCATCTTTTCTGTCTCTGATTCGTACTTaGTCAACTGTTTGTGGCCTATTATACACAGCCTGT +
Preference number: 4 (lower is better)
Translates to: ASTASFLSLIRT*STVCGLLYTAC
Trigger: ACAGGCTGTGTATAATAGGCCACAAACAGTTGACAAAGTACGAATCAGAGACAGAAAAGATGCAGTAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR TCA 90 bp CCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTACTGTCCTCTGTCTATAGATTATCATCTTCCTTTTaGTCAAGCCAGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: PKSGTIPPSGTLLSSVYRLSSSF*SSQTFS
Trigger: GGAAAAAGTCTGGCTTGATCAAAAGGAAGATGATAA...TCTATAGACAGAGGACAGTAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTTTATCATCTTCCTTTTaGTCAAGCCAGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSLSSSF*SSQTFS
Trigger: GGAAAAAGTCTGGCTTGATCAAAAGGAAGATGATAA...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTTCTTCATTTTTAACTTaGAGATTATGGCCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSSSFLT*RLWPVF
Trigger: GAAGACCGGCCATAATCTTCAAGTTAAAAATGAAGA...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp TATAAACCATCAACAGTAGAGTTTCATAGTTCAGGTTCCCAGACAGACTCTGATCGTCCACCTCATCTGTaGTGTCTACTTCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: YKPSTVEFHSSGSQTDSDRPPHL*CLLLHH
Trigger: ATGATGAAGAAGTAGACATCACAGATGAGGTGGACG...ATCAGAGTCTGTCTGGGAACCTGAACTATGAAACTCTACTGTTGATGGTTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCATTCTTCTGGGGTGTTTaGGAAGACAACTCGTCCACC +
Preference number: 4 (lower is better)
Translates to: IISVTTHPYLIYSHKQISFFWGV*EDNSST
Trigger: GGTGGACGAGTTGTCTTCTCAAACACCCCAGAAGAA...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp CATGCCTCTCCTGGTCTCCTGTTAGATTTATTAATCAGTAGTTCTAAACCATATCTCTGTTCTCTTCACTaGTGGTGTTATCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: HASPGLLLDLLISSSKPYLCSLH*WCYPRS
Trigger: GGACCTTGGATAACACCATCAGTGAAGAGAACAGAG...ATATGGTTTAGAACTACTGATTAATAAATCTAACAGGAGACCAGGAGAGGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp CCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTACTGTCCTCTGTCTATAGATCTGCCATAGAAACATaGGCATGCAAATCCATTATT +
Preference number: 4 (lower is better)
Translates to: PKSGTIPPSGTLLSSVYRSAIET*ACKSII
Trigger: AATAATGGATTTGCATGCTCATGTTTCTATGGCAGA...TCTATAGACAGAGGACAGTAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp GGCAACGCATCAAGAAGATACATTACTAAGAGGGTTAAGATATTAATAGAGGGTGGCATGAGAATTGCTTaGATCCAGGAGGTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GNASRRYITKRVKILIEGGMRIA*IQEVEV
Trigger: AACCTCTACCTCCTGGATTCAAGCAATTCTCATGCC...ACCCTCTATTAATATCTTAACCCTCTTAGTAATGTATCTTCTTGATGCGTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTTCACTAGCAAAGGCTaGTACCATCATAGTAACACT +
Preference number: 4 (lower is better)
Translates to: YTPKVSANKSGQNPGERFFTSKG*YHHSNT
Trigger: AGTGTTACTATGATGGTATCAGCCTTTGCTAGTGAA...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR GCA 90 bp GTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTTGCTCAGAGTCTTCCTCTCACTTGTAAAACAGTaGGGCTTCCAATTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VKNSSAIKQLVTLLRVFLSLVKQ*GFQLAL
Trigger: CAAAGCTAATTGGAAGCCGCACTGTTTTACAAGTGA...GAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp CAGTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTTCTGGAGAAGGCAACTaGCTGGCATCAACTATTATT +
Preference number: 4 (lower is better)
Translates to: QLRSKIHVFHTLSYACFSSGEGN*LASTII
Trigger: AATAATAGTTGATGCCAGGCAGTTGCCTTCTCCAGA...AGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR GCA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTGTTACATGGTTCTGCTaGACAGACTTCAACTACTTT +
Preference number: 4 (lower is better)
Translates to: YTPKVSANKSGQNPGERFVTWFC*TDFNYF
Trigger: AAAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAAC...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATAACTGTTACATGGTTCTaGTGCACAGACTTCAACTAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKEECLIDIITVTWF*CTDFNY
Trigger: GTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGT...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGAGCAATTGGTCACTTTaGTCAGAGTCTTCCTCATAC +
Preference number: 4 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQSNWSL*SESSSY
Trigger: GTATGAGGAAGACTCTGAGCAAAGTGACCAATTGCT...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp TGGCTTCTAGAAAACCTTAATTCTTGCACCAGAGGATTTGATAAGAGCCATCTGAAGATTTTCTTGTCATaGCTCTCCTGGTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: WLLENLNSCTRGFDKSHLKIFLS*LSWSPV
Trigger: AACAGGAGACCAGGAGAGGCATGACAAGAAAATCTT...CAGATGGCTCTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTCTAGAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR GCA 90 bp CAGTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTAAGATTTTCTTGTCATaGCTCTCCTGGTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: QLRSKIHVFHTLSYACFSKIFLS*LSWSPV
Trigger: AACAGGAGACCAGGAGAGGCATGACAAGAAAATCTT...AGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR GCA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTCTAAAGCTGACTCACTaGTTCTTCCAATACTCCTTA +
Preference number: 4 (lower is better)
Translates to: YTPKVSANKSGQNPGERFLKLTH*FFQYSL
Trigger: TAAGGAGTATTGGAAGAAGCAGTGAGTCAGCTTTAG...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR GCA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTACTGTTTATCCTAAGTaGACACAGAGAAATGGAAAA +
Preference number: 4 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLTVYPK*TQRNGK
Trigger: TTTTCCATTTCTCTGTGTGCACTTAGGATAAACAGT...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTACTGTTTATCCTAAGTaGACACAGAGAAATGGAAAA +
Preference number: 4 (lower is better)
Translates to: ISTENSINCCLLTCDWMATVYPK*TQRNGK
Trigger: TTTTCCATTTCTCTGTGTGCACTTAGGATAAACAGT...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp CTGAACACAACAGTAAAGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGAAAACCTTAATTCTTaGACCAGAGGATTTGATAAG +
Preference number: 4 (lower is better)
Translates to: LNTTVKPTRLLSFTAYSIENLNS*TRGFDK
Trigger: CTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTC...AATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTACTGTTGTGTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR GCA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATCCTTCAAGACCCCCATaGAAATGCATCTATAGCATT +
Preference number: 4 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNPSRPP*KCIYSI
Trigger: AATGCTATAGATGCATTTGCATGGGGGTCTTGAAGG...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR CCA 90 bp AAGGTTTCTGAGGCCTGTGTTTGTGATACAGGATCCATCTCACACTGTAGTCCTTTAGCTTTGAAATTTTaGTCCATCTTCGGCCAAATT +
Preference number: 4 (lower is better)
Translates to: KVSEACVCDTGSISHCSPLALKF*SIFGQI
Trigger: AATTTGGCCGAAGATGGACCAAAATTTCAAAGCTAA...AGGACTACAGTGTGAGATGGATCCTGTATCACAAACACAGGCCTCAGAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GGAATGGTTAGAAAACTAACCATTTCAAGTCCCAGAATATCAGAGTTCTGCATGTTTCAAATAGCGTTCTaGTGTTTTAGCTTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: GMVRKLTISSPRISEFCMFQIAF*CFSLAP
Trigger: GGGCGCCAAGCTAAAACACCAGAACGCTATTTGAAA...CATGCAGAACTCTGATATTCTGGGACTTGAAATGGTTAGTTTTCTAACCATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCTCAGCAGAATATATaGAAAGAATGGAAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: ISTENSINCCLLTCDWMASQQNI*KEWKCF
Trigger: AAAGCACTTCCATTCTTTCCATATATTCTGCTGAGA...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCAAGGTTTCCTGACTTTTaGTATAGTTCCTCTTACACT +
Preference number: 4 (lower is better)
Translates to: VLHGCFVSTKQSNINSRARFPDF*YSSSYT
Trigger: AGTGTAAGAGGAACTATACCAAAAGTCAGGAAACCT...TGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTTTGATAAGAGCCATCTaGGCTAATTTCCTCACTTAT +
Preference number: 4 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSLIRAI*ANFLTY
Trigger: ATAAGTGAGGAAATTAGCCCAGATGGCTCTTATCAA...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR CCA 90 bp GTAGTCCTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTTTGCCCGATTGTACTTaGTCCACTAAGCATATTAAT +
Preference number: 4 (lower is better)
Translates to: VVLYSDCYMVLLHRLQLLLPDCT*STKHIN
Trigger: ATTAATATGCTTAGTGGACCAAGTACAATCGGGCAA...AAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAGGACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR TCA 90 bp ACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTTCTTCATTTTTAACTTaGAGATTATGGCCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: TLQKFLQTSQVRIPAKDFSSFLT*RLWPVF
Trigger: GAAGACCGGCCATAATCTTCAAGTTAAAAATGAAGA...AAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp TGGCTTCTAGAAAACCTTAATTCTTGCACCAGAGGATTTGATAAGAGCCATCTGCATCTTTTCTGTCTCTaGTTCGTACTTTGTCAACTG +
Preference number: 4 (lower is better)
Translates to: WLLENLNSCTRGFDKSHLHLFCL*FVLCQL
Trigger: CAGTTGACAAAGTACGAATCAGAGACAGAAAAGATG...CAGATGGCTCTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTCTAGAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR TCA 90 bp GTAAACATTATTAAAGGCAGGTGTTCCTTTGAGACTCTGCCTCCTGAACTTCCTCTCTGTTCTCCAAGATaGATCAAGATAGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: VNIIKGRCSFETLPPELPLCSPR*IKIVIF
Trigger: AAAGATCACTATCTTGATTCATCTTGGAGAACAGAG...AGGAAGTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTTTAATAATGTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR TCA 90 bp AGTTCCTCTTACACTCTCAGCCCTCAAACTAATTGTTTTATAAGCTATACTTCACCCAAATCACAAAGTTaGGACAAGAACCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: SSSYTLSPQTNCFISYTSPKSQS*DKNQVT
Trigger: GGTGACCTGGTTCTTGTCTCAACTTTGTGATTTGGG...TGAAGTATAGCTTATAAAACAATTAGTTTGAGGGCTGAGAGTGTAAGAGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp CATGCCTCTCCTGGTCTCCTGTTAGATTTATTAATCAGTAGTTCTAAACCATATAAGGCCCCAAACTCTTaGCAAGTATCATCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: HASPGLLLDLLISSSKPYKAPNS*QVSSLR
Trigger: TCTCAAGGATGATACTTGTCAAGAGTTTGGGGCCTT...ATATGGTTTAGAACTACTGATTAATAAATCTAACAGGAGACCAGGAGAGGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp ATTAGGATCAAAAGCAGGATGAGAATGATACCATCCAATAACACTGAAGCCTCTCTGCTATTTTTCCAATaGTGCCCTTCAGAATACAGG +
Preference number: 4 (lower is better)
Translates to: IRIKSRMRMIPSNNTEASLLFFQ*CPSEYR
Trigger: CCTGTATTCTGAAGGGCATCATTGGAAAAATAGCAG...AGAGGCTTCAGTGTTATTGGATGGTATCATTCTCATCCTGCTTTTGATCCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR TCA 90 bp GTAAACATTATTAAAGGCAGGTGTTCCTTTGAGACTCTGCCTCCTGAACTTCCTTTACTGAATTTCTACTaGGAATTCCATCAACTGCTG +
Preference number: 4 (lower is better)
Translates to: VNIIKGRCSFETLPPELPLLNFY*EFHQLL
Trigger: CAGCAGTTGATGGAATTCTCAGTAGAAATTCAGTAA...AGGAAGTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTTTAATAATGTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp GGCAACGCATCAAGAAGATACATTACTAAGAGGGTTAAGATATTAATAGAGGGTCTGTCTGTTGTTATCTaGTCTAAGACACCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GNASRRYITKRVKILIEGLSVVI*SKTPFP
Trigger: AGGGAAGGGTGTCTTAGATCAGATAACAACAGACAG...ACCCTCTATTAATATCTTAACCCTCTTAGTAATGTATCTTCTTGATGCGTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR TCA 90 bp CTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTTATCAAAAGAAGCCCAAGGGGTaGACATCATATATTCATCTA +
Preference number: 4 (lower is better)
Translates to: LYSDCYMVLLHRLQLLYQKKPKG*TSYIHL
Trigger: TAGATGAATATATGATGTTCACCCCTTGGGCTTCTT...TTGATAAAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR GCA 90 bp CTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTTATCAATCACTTGTAAAACAGTaGGGCTTCCAATTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LYSDCYMVLLHRLQLLYQSLVKQ*GFQLAL
Trigger: CAAAGCTAATTGGAAGCCGCACTGTTTTACAAGTGA...TTGATAAAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp TGGCTTCTAGAAAACCTTAATTCTTGCACCAGAGGATTTGATAAGAGCCATCTGGTTACATGGTTCTGCTaGACAGACTTCAACTACTTT +
Preference number: 4 (lower is better)
Translates to: WLLENLNSCTRGFDKSHLVTWFC*TDFNYF
Trigger: AAAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAAC...CAGATGGCTCTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTCTAGAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR GCA 90 bp GGAATGGTTAGAAAACTAACCATTTCAAGTCCCAGAATATCAGAGTTCTGCATGACTGTTACATGGTTCTaGTGCACAGACTTCAACTAC +
Preference number: 4 (lower is better)
Translates to: GMVRKLTISSPRISEFCMTVTWF*CTDFNY
Trigger: GTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGT...CATGCAGAACTCTGATATTCTGGGACTTGAAATGGTTAGTTTTCTAACCATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp GGCAACGCATCAAGAAGATACATTACTAAGAGGGTTAAGATATTAATAGAGGGTCATCCCAATGAACTTTaGACCTCCTCTGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: GNASRRYITKRVKILIEGHPNEL*TSSGEV
Trigger: TACTTCTCCAGAGGAGGTGCAAAGTTCATTGGGATG...ACCCTCTATTAATATCTTAACCCTCTTAGTAATGTATCTTCTTGATGCGTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp TATTTAGCTTGTGTGTCAATATCTCGTAAGGAAGGATTAGGATCAAAAGCAGGACATCCCAATGAACTTTaGACCTCCTCTGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: YLACVSISRKEGLGSKAGHPNEL*TSSGEV
Trigger: TACTTCTCCAGAGGAGGTGCAAAGTTCATTGGGATG...TCCTGCTTTTGATCCTAATCCTTCCTTACGAGATATTGACACACAAGCTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp ATTAGGATCAAAAGCAGGATGAGAATGATACCATCCAATAACACTGAAGCCTCTAGCAATTGGTCACTTTaGTCAGAGTCTTCCTCATAC +
Preference number: 4 (lower is better)
Translates to: IRIKSRMRMIPSNNTEASSNWSL*SESSSY
Trigger: GTATGAGGAAGACTCTGAGCAAAGTGACCAATTGCT...AGAGGCTTCAGTGTTATTGGATGGTATCATTCTCATCCTGCTTTTGATCCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGCTAAAGCTGACTCACTaGTTCTTCCAATACTCCTTA +
Preference number: 4 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQLKLTH*FFQYSL
Trigger: TAAGGAGTATTGGAAGAAGCAGTGAGTCAGCTTTAG...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATAAAAGGAATCAATCACTaGCTTTCACAGAATCACGCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKEECLIDIIKGINH*LSQNHA
Trigger: TGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTTT...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp ATTGGCTTAAATGCAGATCATAATTCTGAGTTTTGGTGTCATTTGAAGATGACGAATGCAGAGGAGACCTaGTCAGGTTGGCATGTTGAA +
Preference number: 4 (lower is better)
Translates to: IGLNADHNSEFWCHLKMTNAEET*SGWHVE
Trigger: TTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATT...CGTCATCTTCAAATGACACCAAAACTCAGAATTATGATCTGCATTTAAGCCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp GGAATGGTTAGAAAACTAACCATTTCAAGTCCCAGAATATCAGAGTTCTGCATGAGAATATCAGAGTTCTaGATGCTGATTGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GMVRKLTISSPRISEFCMRISEF*MLIGFC
Trigger: GCAGAACCCAATCAGCATGCAGAACTCTGATATTCT...CATGCAGAACTCTGATATTCTGGGACTTGAAATGGTTAGTTTTCTAACCATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp TCCTATCAATTCGAGGTATGTATGAATCCGTCCAATACAATTAACATCTCCACATGGGGAGGCAGCAACTaGTTTGAGTCAAAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: SYQFEVCMNPSNTINISTWGGSN*FESKLL
Trigger: TAACAACTTTGACTCAAAGCAGTTGCTGCCTCCCCA...TGTGGAGATGTTAATTGTATTGGACGGATTCATACATACCTCGAATTGATAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR CCA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGTTCTATTTCCTGTTCTaGTGGCTTAAGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQFYFLF*WLKLFF
Trigger: GAAGAAGAGCTTAAGCCACCAGAACAGGAAATAGAA...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CCA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATTTCTATTTCCTGTTCTaGTGGCTTAAGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNFYFLF*WLKLFF
Trigger: GAAGAAGAGCTTAAGCCACCAGAACAGGAAATAGAA...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp TCCTATCAATTCGAGGTATGTATGAATCCGTCCAATACAATTAACATCTCCACATTTCAAATAGCGTTCTaGTGTTTTAGCTTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SYQFEVCMNPSNTINISTFQIAF*CFSLAP
Trigger: GGGCGCCAAGCTAAAACACCAGAACGCTATTTGAAA...TGTGGAGATGTTAATTGTATTGGACGGATTCATACATACCTCGAATTGATAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR CCA 90 bp TGGCTTCTAGAAAACCTTAATTCTTGCACCAGAGGATTTGATAAGAGCCATCTGTTTGTCAACTGTTTGTaGCCTATTATACACAGCCTG +
Preference number: 4 (lower is better)
Translates to: WLLENLNSCTRGFDKSHLFVNCL*PIIHSL
Trigger: CAGGCTGTGTATAATAGGCCACAAACAGTTGACAAA...CAGATGGCTCTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTCTAGAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR CCA 90 bp AGTTCCTCTTACACTCTCAGCCCTCAAACTAATTGTTTTATAAGCTATACTTCAAGACGCTGGGCAAGTTaGTATGCTTCTACTGCATCT +
Preference number: 4 (lower is better)
Translates to: SSSYTLSPQTNCFISYTSRRWAS*YASTAS
Trigger: AGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCT...TGAAGTATAGCTTATAAAACAATTAGTTTGAGGGCTGAGAGTGTAAGAGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATATTACAAGGTATCAGTTaGAAGGGATCAAACGAGCTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKEECLIDIILQGIS*KGSNEL
Trigger: AAGCTCGTTTGATCCCTTCCAACTGATACCTTGTAA...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CCA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATTTACAAGGTATCAGTTaGAAGGGATCAAACGAGCTT +
Preference number: 4 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNLQGIS*KGSNEL
Trigger: AAGCTCGTTTGATCCCTTCCAACTGATACCTTGTAA...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AGTTCCTCTTACACTCTCAGCCCTCAAACTAATTGTTTTATAAGCTATACTTCAATGGGGACGCTGCTATaGGAGAGCCTGTATTTTTCT +
Preference number: 4 (lower is better)
Translates to: SSSYTLSPQTNCFISYTSMGTLL*ESLYFS
Trigger: AGAAAAATACAGGCTCTCCCATAGCAGCGTCCCCAT...TGAAGTATAGCTTATAAAACAATTAGTTTGAGGGCTGAGAGTGTAAGAGGAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCAATGGGGACGCTGCTATaGGAGAGCCTGTATTTTTCT +
Preference number: 4 (lower is better)
Translates to: IISVTTHPYLIYSHKQISMGTLL*ESLYFS
Trigger: AGAAAAATACAGGCTCTCCCATAGCAGCGTCCCCAT...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATATTGTCATGCCTCTCCTaGTCTCCTGTTAGATTTATT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKEECLIDIILSCLS*SPVRFI
Trigger: AATAAATCTAACAGGAGACCAGGAGAGGCATGACAA...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATTGGTCACTTTGCTCAGAGTCTTCCTCATACACTCCAAAAGTTTCTGCAAACATTGTCATGCCTCTCCTaGTCTCCTGTTAGATTTATT +
Preference number: 4 (lower is better)
Translates to: IGHFAQSLPHTLQKFLQTLSCLS*SPVRFI
Trigger: AATAAATCTAACAGGAGACCAGGAGAGGCATGACAA...TGTTTGCAGAAACTTTTGGAGTGTATGAGGAAGACTCTGAGCAAAGTGACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GTAAACATTATTAAAGGCAGGTGTTCCTTTGAGACTCTGCCTCCTGAACTTCCTGAGATCCTCGCAATATaGCTTAGATTAGCAAATATG +
Preference number: 4 (lower is better)
Translates to: VNIIKGRCSFETLPPELPEILAI*LRLANM
Trigger: CATATTTGCTAATCTAAGCCATATTGCGAGGATCTC...AGGAAGTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTTTAATAATGTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATGAGTTTTCGTTAGGTTaGGAAGGAAGTAAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNEFSLG*EGSKFK
Trigger: CTTGAACTTACTTCCTTCCCAACCTAACGAAAACTC...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATATTTCCCTTTCAAGTGTaGCACGAGTTTCAAAACTAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKEECLIDIIFPFQV*HEFQNY
Trigger: GTAGTTTTGAAACTCGTGCCACACTTGAAAGGGAAA...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTTGCTCAGAGTCTTCCTCTCATGGAAACATGCATaGTCTGTCCATCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: VKNSSAIKQLVTLLRVFLSWKHA*SVHLYF
Trigger: AAAATAGAGATGGACAGACCATGCATGTTTCCATGA...GAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR CCA 90 bp GGCAACGCATCAAGAAGATACATTACTAAGAGGGTTAAGATATTAATAGAGGGTGATCATGAATGTGCCTaGATAAAGCAGGACTTTGGC +
Preference number: 4 (lower is better)
Translates to: GNASRRYITKRVKILIEGDHECA*IKQDFG
Trigger: GCCAAAGTCCTGCTTTATCCAGGCACATTCATGATC...ACCCTCTATTAATATCTTAACCCTCTTAGTAATGTATCTTCTTGATGCGTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATAATAAATGTCAGAGCTaGGATCTGAATCCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNNKCQS*DLNPVE
Trigger: CTCTACTGGATTCAGATCCCAGCTCTGACATTTATT...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
3UTR CAA 72 bp GTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTaGCTCAGAGTCTTCCTCATACACTCCAAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: VKNSSAIKQLVT*LRVFLIHSKSF
Trigger: GAAACTTTTGGAGTGTATGAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
3UTR CAA 72 bp TCTATTTCAGTCAAGAATTCTTCAGCCATAAAGCAATaGGTCACTTTGCTCAGAGTCTTCCTCATACACTCC +
Preference number: 4 (lower is better)
Translates to: SISVKNSSAIKQ*VTLLRVFLIHS
Trigger: GGAGTGTATGAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGACTGAAATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp TGGCTTCTAGAAAACCTTAATTCTTGCACCAGAGGATTTGATAAGAGCCATCTGTTATCATCTTCCTTTTaGTCAAGCCAGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: WLLENLNSCTRGFDKSHLLSSSF*SSQTFS
Trigger: GGAAAAAGTCTGGCTTGATCAAAAGGAAGATGATAA...CAGATGGCTCTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTCTAGAAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR TCA 90 bp TCTATTTCAGTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTTGCTCAGATTATGGCCGGTCTTCTaGTTTGGTGTTTCTTTATCC +
Preference number: 4 (lower is better)
Translates to: SISVKNSSAIKQLVTLLRLWPVF*FGVSLS
Trigger: GGATAAAGAAACACCAAATCAGAAGACCGGCCATAA...TCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGACTGAAATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR TCA 90 bp TGGCTTCTAGAAAACCTTAATTCTTGCACCAGAGGATTTGATAAGAGCCATCTGCTCTGTTCTCCAAGATaGATCAAGATAGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: WLLENLNSCTRGFDKSHLLCSPR*IKIVIF
Trigger: AAAGATCACTATCTTGATTCATCTTGGAGAACAGAG...CAGATGGCTCTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTCTAGAAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR TCA 90 bp ATTGGCTTAAATGCAGATCATAATTCTGAGTTTTGGTGTCATTTGAAGATGACGGACAAGTATCATCCTTaGGATCCTCGCAATATGGCT +
Preference number: 4 (lower is better)
Translates to: IGLNADHNSEFWCHLKMTDKYHP*DPRNMA
Trigger: AGCCATATTGCGAGGATCTCAAGGATGATACTTGTC...CGTCATCTTCAAATGACACCAAAACTCAGAATTATGATCTGCATTTAAGCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCAGACAAGTATCATCCTTaGGATCCTCGCAATATGGCT +
Preference number: 4 (lower is better)
Translates to: IISVTTHPYLIYSHKQISDKYHP*DPRNMA
Trigger: AGCCATATTGCGAGGATCTCAAGGATGATACTTGTC...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR TCA 90 bp TATTTAGCTTGTGTGTCAATATCTCGTAAGGAAGGATTAGGATCAAAAGCAGGAAAGACAGAATCAGGATaGAGACACCTGCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: YLACVSISRKEGLGSKAGKTESG*RHLHVF
Trigger: AAAGACATGCAGGTGTCTTCATCCTGATTCTGTCTT...TCCTGCTTTTGATCCTAATCCTTCCTTACGAGATATTGACACACAAGCTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATATTACTGAATTTCTACTaGGAATTCCATCAACTGCTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKEECLIDIILLNFY*EFHQLL
Trigger: CAGCAGTTGATGGAATTCTCAGTAGAAATTCAGTAA...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp TATAAACCATCAACAGTAGAGTTTCATAGTTCAGGTTCCCAGACAGACTCTGATTCACTTGTAAAACAGTaGGGCTTCCAATTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: YKPSTVEFHSSGSQTDSDSLVKQ*GFQLAL
Trigger: CAAAGCTAATTGGAAGCCGCACTGTTTTACAAGTGA...ATCAGAGTCTGTCTGGGAACCTGAACTATGAAACTCTACTGTTGATGGTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp TATTTAGCTTGTGTGTCAATATCTCGTAAGGAAGGATTAGGATCAAAAGCAGGATCTGGAGAAGGCAACTaGCTGGCATCAACTATTATT +
Preference number: 4 (lower is better)
Translates to: YLACVSISRKEGLGSKAGSGEGN*LASTII
Trigger: AATAATAGTTGATGCCAGGCAGTTGCCTTCTCCAGA...TCCTGCTTTTGATCCTAATCCTTCCTTACGAGATATTGACACACAAGCTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTACATCCAAAATTGATTaGTCCTATCAATTCGAGGTA +
Preference number: 4 (lower is better)
Translates to: YTPKVSANKSGQNPGERFTSKID*SYQFEV
Trigger: TACCTCGAATTGATAGGAGCAATCAATTTTGGATGT...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp GTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTTGCTCAGAGTCTTCCTCACATCCAAAATTGATTaGTCCTATCAATTCGAGGTA +
Preference number: 4 (lower is better)
Translates to: VKNSSAIKQLVTLLRVFLTSKID*SYQFEV
Trigger: TACCTCGAATTGATAGGAGCAATCAATTTTGGATGT...GAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp CTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTTATCAATTGGTATGCTTCTACTaGATCTTTTCTGTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LYSDCYMVLLHRLQLLYQLVCFY*IFSVSD
Trigger: ATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAA...TTGATAAAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp TCCTATCAATTCGAGGTATGTATGAATCCGTCCAATACAATTAACATCTCCACACTGGGCAAGTTGGTATaGTTCTACTGCATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SYQFEVCMNPSNTINISTLGKLV*FYCIFS
Trigger: AGAAAAGATGCAGTAGAAGCATACCAACTTGCCCAG...TGTGGAGATGTTAATTGTATTGGACGGATTCATACATACCTCGAATTGATAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR GCA 90 bp AGTTCCTCTTACACTCTCAGCCCTCAAACTAATTGTTTTATAAGCTATACTTCACATCCCAATGAACTTTaGACCTCCTCTGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: SSSYTLSPQTNCFISYTSHPNEL*TSSGEV
Trigger: TACTTCTCCAGAGGAGGTGCAAAGTTCATTGGGATG...TGAAGTATAGCTTATAAAACAATTAGTTTGAGGGCTGAGAGTGTAAGAGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATTAGGATCAAAAGCAGGATGAGAATGATACCATCCAATAACACTGAAGCCTCTTTCTATTTCCTGTTCTaGTGGCTTAAGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: IRIKSRMRMIPSNNTEASFYFLF*WLKLFF
Trigger: GAAGAAGAGCTTAAGCCACCAGAACAGGAAATAGAA...AGAGGCTTCAGTGTTATTGGATGGTATCATTCTCATCCTGCTTTTGATCCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCAACTCAGACTGTTACATaGTTCTGCTGCACAGACTTC +
Preference number: 4 (lower is better)
Translates to: IISVTTHPYLIYSHKQISTQTVT*FCCTDF
Trigger: GAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGT...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CATGCCTCTCCTGGTCTCCTGTTAGATTTATTAATCAGTAGTTCTAAACCATATGCGATAAGAGCCATCTaGGCTAATTTCCTCACTTAT +
Preference number: 4 (lower is better)
Translates to: HASPGLLLDLLISSSKPYAIRAI*ANFLTY
Trigger: ATAAGTGAGGAAATTAGCCCAGATGGCTCTTATCGC...ATATGGTTTAGAACTACTGATTAATAAATCTAACAGGAGACCAGGAGAGGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTTCTCAGCAGAATATATaGAAAGAATGGAAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: TLQKFLQTSQVRIPAKDFSQQNI*KEWKCF
Trigger: AAAGCACTTCCATTCTTTCCATATATTCTGCTGAGA...AAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATACAATGTGGGTACCTGTaGTTGCAAAATTGTTTTAAG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKEECLIDIIQCGYL*LQNCFK
Trigger: CTTAAAACAATTTTGCAACCACAGGTACCCACATTG...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTATCCATTTGATAAGAGCCATCTaGGCTAATTTCCTCACTTAT +
Preference number: 4 (lower is better)
Translates to: QKFLQTSQVRIPAKDFIHLIRAI*ANFLTY
Trigger: ATAAGTGAGGAAATTAGCCCAGATGGCTCTTATCAA...ATGGATAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR CCA 90 bp CATGCCTCTCCTGGTCTCCTGTTAGATTTATTAATCAGTAGTTCTAAACCATATTTACAAGGTATCAGTTaGAAGGGATCAAACGAGCTC +
Preference number: 4 (lower is better)
Translates to: HASPGLLLDLLISSSKPYLQGIS*KGSNEL
Trigger: GAGCTCGTTTGATCCCTTCCAACTGATACCTTGTAA...ATATGGTTTAGAACTACTGATTAATAAATCTAACAGGAGACCAGGAGAGGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659812.1
3UTR CAA 72 bp ATCTTTTCTGTCTCTGATTCGTACTTTGTCAACTGTTaGTGGCCTATTATACACAGCCTGTTCACATCCAAA +
Preference number: 4 (lower is better)
Translates to: IFSVSDSYFVNC*WPIIHSLFTSK
Trigger: TTTGGATGTGAACAGGCTGTGTATAATAGGCCACAAACAGTTGACAAAGTACGAATCAGAGACAGAAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR GCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCATCTGGAGAAGGCAACTaGCTGGCATCAACTATTATT +
Preference number: 4 (lower is better)
Translates to: IISVTTHPYLIYSHKQISSGEGN*LASTII
Trigger: AATAATAGTTGATGCCAGGCAGTTGCCTTCTCCAGA...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCAAGCTTCATGGAAACATaGATGGTCTGTCCATCTCTA +
Preference number: 4 (lower is better)
Translates to: IISVTTHPYLIYSHKQISSFMET*MVCPSL
Trigger: TAGAGATGGACAGACCATGCATGTTTCCATGAAGCT...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp GGCAACGCATCAAGAAGATACATTACTAAGAGGGTTAAGATATTAATAGAGGGTTTTGTCAACTGTTTGTaGCCTATTATACACAGCCTG +
Preference number: 4 (lower is better)
Translates to: GNASRRYITKRVKILIEGFVNCL*PIIHSL
Trigger: CAGGCTGTGTATAATAGGCCACAAACAGTTGACAAA...ACCCTCTATTAATATCTTAACCCTCTTAGTAATGTATCTTCTTGATGCGTTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CCA 90 bp ATCTTGTCTTTTCAAATACTAATCCCCACTGAGGTTCTTCTAACATCTGCTGTATTTGTCAACTGTTTGTaGCCTATTATACACAGCCTG +
Preference number: 4 (lower is better)
Translates to: ILSFQILIPTEVLLTSAVFVNCL*PIIHSL
Trigger: CAGGCTGTGTATAATAGGCCACAAACAGTTGACAAA...TACAGCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATTTGAAAAGACAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATTATTTCGATTATAGGGACTAACAATCATCCCAATGAACTTTGCACCTCCTCTTTTGTCAACTGTTTGTaGCCTATTATACACAGCCTG +
Preference number: 4 (lower is better)
Translates to: IISIIGTNNHPNELCTSSFVNCL*PIIHSL
Trigger: CAGGCTGTGTATAATAGGCCACAAACAGTTGACAAA...AGAGGAGGTGCAAAGTTCATTGGGATGATTGTTAGTCCCTATAATCGAAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATTGGTCACTTTGCTCAGAGTCTTCCTCATACACTCCAAAAGTTTCTGCAAACATCTCAGCAGAATATATaGAAAGAATGGAAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: IGHFAQSLPHTLQKFLQTSQQNI*KEWKCF
Trigger: AAAGCACTTCCATTCTTTCCATATATTCTGCTGAGA...TGTTTGCAGAAACTTTTGGAGTGTATGAGGAAGACTCTGAGCAAAGTGACCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp TCTATTTCAGTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTTGCTCAGATTGTCATGCCTCTCCTaGTCTCCTGTTAGATTTATT +
Preference number: 4 (lower is better)
Translates to: SISVKNSSAIKQLVTLLRLSCLS*SPVRFI
Trigger: AATAAATCTAACAGGAGACCAGGAGAGGCATGACAA...TCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGACTGAAATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CAGTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTCATAGACATCATATGTaGCCTGAAAAGCCAAAATTA +
Preference number: 4 (lower is better)
Translates to: QLRSKIHVFHTLSYACFSHRHHM*PEKPKL
Trigger: TAATTTTGGCTTTTCAGGCCACATATGATGTCTATG...AGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000659812.1
CDS-3UTR CCA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGCATAGACATCATATGTaGCCTGAAAAGCCAAAATTA +
Preference number: 4 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQHRHHM*PEKPKL
Trigger: TAATTTTGGCTTTTCAGGCCACATATGATGTCTATG...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp CATGCCTCTCCTGGTCTCCTGTTAGATTTATTAATCAGTAGTTCTAAACCATATGCACAAGGTATCCCATaGCTTCTAGAAAACCTTAAT +
Preference number: 4 (lower is better)
Translates to: HASPGLLLDLLISSSKPYAQGIP*LLENLN
Trigger: ATTAAGGTTTTCTAGAAGCCATGGGATACCTTGTGC...ATATGGTTTAGAACTACTGATTAATAAATCTAACAGGAGACCAGGAGAGGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR TCA 90 bp TATTTAGCTTGTGTGTCAATATCTCGTAAGGAAGGATTAGGATCAAAAGCAGGATTATCATCTTCCTTTTaGTCAAGCCAGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: YLACVSISRKEGLGSKAGLSSSF*SSQTFS
Trigger: GGAAAAAGTCTGGCTTGATCAAAAGGAAGATGATAA...TCCTGCTTTTGATCCTAATCCTTCCTTACGAGATATTGACACACAAGCTAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR GCA 90 bp GGCAACGCATCAAGAAGATACATTACTAAGAGGGTTAAGATATTAATAGAGGGTATTCCCCTTCCATCATaGTTGTTGCAGTTTTTAATC +
Preference number: 4 (lower is better)
Translates to: GNASRRYITKRVKILIEGIPLPS*LLQFLI
Trigger: GATTAAAAACTGCAACAAGCATGATGGAAGGGGAAT...ACCCTCTATTAATATCTTAACCCTCTTAGTAATGTATCTTCTTGATGCGTTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR GCA 90 bp TTCTCCAAAAACTTAAGAAGAGTGACACACTATAGTACACGGGGTATTAAGCAAATTCCCCTTCCATCATaGTTGTTGCAGTTTTTAATC +
Preference number: 4 (lower is better)
Translates to: FSKNLRRVTHYSTRGIKQIPLPS*LLQFLI
Trigger: GATTAAAAACTGCAACAAGCATGATGGAAGGGGAAT...TTGCTTAATACCCCGTGTACTATAGTGTGTCACTCTTCTTAAGTTTTTGGAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR CCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCATTTGTCAACTGTTTGTaGCCTATTATACACAGCCTG +
Preference number: 4 (lower is better)
Translates to: IISVTTHPYLIYSHKQISFVNCL*PIIHSL
Trigger: CAGGCTGTGTATAATAGGCCACAAACAGTTGACAAA...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATTGGCTTAAATGCAGATCATAATTCTGAGTTTTGGTGTCATTTGAAGATGACGGAGTTTTCGTTAGGTTaGGAAGGAAGTAAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: IGLNADHNSEFWCHLKMTEFSLG*EGSKFK
Trigger: CTTGAACTTACTTCCTTCCCAACCTAACGAAAACTC...CGTCATCTTCAAATGACACCAAAACTCAGAATTATGATCTGCATTTAAGCCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCATTTCCCTTTCAAGTGTaGCACGAGTTTCAAAACTAC +
Preference number: 4 (lower is better)
Translates to: IISVTTHPYLIYSHKQISFPFQV*HEFQNY
Trigger: GTAGTTTTGAAACTCGTGCCACACTTGAAAGGGAAA...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CCA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCAACCGCAGGTTTAAAGTaGGATTATCCTAGACAAACT +
Preference number: 4 (lower is better)
Translates to: IISVTTHPYLIYSHKQISTAGLK*DYPRQT
Trigger: AGTTTGTCTAGGATAATCCCACTTTAAACCTGCGGT...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR TCA 90 bp AGTTCCTCTTACACTCTCAGCCCTCAAACTAATTGTTTTATAAGCTATACTTCACTCTGTTCTCCAAGATaGATCAAGATAGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: SSSYTLSPQTNCFISYTSLCSPR*IKIVIF
Trigger: AAAGATCACTATCTTGATTCATCTTGGAGAACAGAG...TGAAGTATAGCTTATAAAACAATTAGTTTGAGGGCTGAGAGTGTAAGAGGAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR GCA 90 bp AGTTCCTCTTACACTCTCAGCCCTCAAACTAATTGTTTTATAAGCTATACTTCAATTCCCCTTCCATCATaGTTGTTGCAGTTTTTAATC +
Preference number: 4 (lower is better)
Translates to: SSSYTLSPQTNCFISYTSIPLPS*LLQFLI
Trigger: GATTAAAAACTGCAACAAGCATGATGGAAGGGGAAT...TGAAGTATAGCTTATAAAACAATTAGTTTGAGGGCTGAGAGTGTAAGAGGAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR GCA 90 bp CATGCCTCTCCTGGTCTCCTGTTAGATTTATTAATCAGTAGTTCTAAACCATATGAAAACCTTAATTCTTaGACCAGAGGATTTGATAAG +
Preference number: 4 (lower is better)
Translates to: HASPGLLLDLLISSSKPYENLNS*TRGFDK
Trigger: CTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTC...ATATGGTTTAGAACTACTGATTAATAAATCTAACAGGAGACCAGGAGAGGCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR CCA 90 bp ATCTTGTCTTTTCAAATACTAATCCCCACTGAGGTTCTTCTAACATCTGCTGTATTAGCTTTGAAATTTTaGTCCATCTTCGGCCAAATT +
Preference number: 4 (lower is better)
Translates to: ILSFQILIPTEVLLTSAVLALKF*SIFGQI
Trigger: AATTTGGCCGAAGATGGACCAAAATTTCAAAGCTAA...TACAGCAGATGTTAGAAGAACCTCAGTGGGGATTAGTATTTGAAAAGACAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CCA 90 bp AGTTCCTCTTACACTCTCAGCCCTCAAACTAATTGTTTTATAAGCTATACTTCAGAGATCCTCGCAATATaGCTTAGATTAGCAAATATG +
Preference number: 4 (lower is better)
Translates to: SSSYTLSPQTNCFISYTSEILAI*LRLANM
Trigger: CATATTTGCTAATCTAAGCCATATTGCGAGGATCTC...TGAAGTATAGCTTATAAAACAATTAGTTTGAGGGCTGAGAGTGTAAGAGGAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR GCA 90 bp ATTGGCTTAAATGCAGATCATAATTCTGAGTTTTGGTGTCATTTGAAGATGACGACATCCAAAATTGATTaGTCCTATCAATTCGAGGTA +
Preference number: 4 (lower is better)
Translates to: IGLNADHNSEFWCHLKMTTSKID*SYQFEV
Trigger: TACCTCGAATTGATAGGAGCAATCAATTTTGGATGT...CGTCATCTTCAAATGACACCAAAACTCAGAATTATGATCTGCATTTAAGCCAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp CCTGATCCCTGGGTGGTCAGAGCCACAGCTTCCCAGTGTTCAGAGGCAGCAGAATCATTTCTGGCAGCCTaGAGTAGAACCCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: PDPWVVRATASQCSEAAESFLAA*SRTQSC
Trigger: GCAGCTCTGGGTTCTACTCAAGGCTGCCAGAAATGA...TTCTGCTGCCTCTGAACACTGGGAAGCTGTGGCTCTGACCACCCAGGGATCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp GCCTTCCACCTAGCAGGACCTTCGCATGCAGCTGCCTCCTTTGGACTGTGTGGAGGGCTCTGGAGAAACTaGACAAGGCTTTCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: AFHLAGPSHAAASFGLCGGLWRN*TRLSAN
Trigger: GTTTGCAGAAAGCCTTGTCAAGTTTCTCCAGAGCCC...TCCACACAGTCCAAAGGAGGCAGCTGCATGCGAAGGTCCTGCTAGGTGGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp GCCTTCCACCTAGCAGGACCTTCGCATGCAGCTGCCTCCTTTGGACTGTGTGGAGGGAGGCAGGATTGTTaGGACACAGGAAAAGCTGAA +
Preference number: 5 (lower is better)
Translates to: AFHLAGPSHAAASFGLCGGRQDC*DTGKAE
Trigger: TTCAGCTTTTCCTGTGTCCAAACAATCCTGCCTCCC...TCCACACAGTCCAAAGGAGGCAGCTGCATGCGAAGGTCCTGCTAGGTGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp CCTGATCCCTGGGTGGTCAGAGCCACAGCTTCCCAGTGTTCAGAGGCAGCAGAACCTCTTCTCTTCTTTTaGCCAACTCCTCAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: PDPWVVRATASQCSEAAEPLLFF*PTPQQR
Trigger: TCTCTGCTGAGGAGTTGGCAAAAAGAAGAGAAGAGG...TTCTGCTGCCTCTGAACACTGGGAAGCTGTGGCTCTGACCACCCAGGGATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp CCTTTGGACTGTGTGGATCGACTCTCCACCTGTATTCCAGGTCCTTCCTCTAGCTCTTGGCAACAACACTaGTCTGGGGTGAGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: PLDCVDRLSTCIPGPSSSSWQQH*SGVREA
Trigger: TGCCTCCCTCACCCCAGACAAGTGTTGTTGCCAAGA...GCTAGAGGAAGGACCTGGAATACAGGTGGAGAGTCGATCCACACAGTCCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp ACCCTACGTCTCCTTGTACGCATAGACTGCAGACGCTGGGCAAGTTGGTATGCTAGGCATTGGCAGGATTaGAACCCAGGCAGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: TLRLLVRIDCRRWASWYARHWQD*NPGSQA
Trigger: AGCCTGACTGCCTGGGTTCAAATCCTGCCAATGCCT...AGCATACCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAGGAGACGTAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR CAA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCAATTCTTCTGGGGTGTTaGAGAAGACAACTCGTCCAC +
Preference number: 5 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPILLGC*RRQLVH
Trigger: GTGGACGAGTTGTCTTCTCAAACACCCCAGAAGAAT...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCGTGGTGGACCCTGGTTaGCAGAACACTCTGATAATC +
Preference number: 5 (lower is better)
Translates to: RSESRRKILSMGTLLWESVVDPG*QNTLII
Trigger: GATTATCAGAGTGTTCTGCAAACCAGGGTCCACCAC...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCGTAAAGCCGACCAGGTaGCTTAGTTTCACAGCCTAC +
Preference number: 5 (lower is better)
Translates to: RSESRRKILSMGTLLWESVKPTR*LSFTAY
Trigger: GTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTAC...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTGCTCAGGTTGGCATGTaGAAGCCACAGTCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSAQVGM*KPQSPL
Trigger: CAGAGGAGACTGTGGCTTCAACATGCCAACCTGAGC...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTCTGCTGTCTGCTGACTaGCGACTGGATGGCTTCAAC +
Preference number: 5 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSLLSAD*RLDGFN
Trigger: GTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAG...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp TGGACTGTGTGGATCGACTCTCCACCTGTATTCCAGGTCCTTCCTCTAGCTGGAGGCCGGTCTTCTGATTaGGTGTTTCTTTATCCAGAC +
Preference number: 5 (lower is better)
Translates to: WTVWIDSPPVFQVLPLAGGRSSD*VFLYPD
Trigger: GTCTGGATAAAGAAACACCAAATCAGAAGACCGGCC...TCCAGCTAGAGGAAGGACCTGGAATACAGGTGGAGAGTCGATCCACACAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp CCTGATCCCTGGGTGGTCAGAGCCACAGCTTCCCAGTGTTCAGAGGCAGCAGAAATGGTGTCCATGCCTTaGTCCCTTTATCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: PDPWVVRATASQCSEAAEMVSMP*SLYLHF
Trigger: AAAATGAAGATAAAGGGACAAAGGCATGGACACCAT...TTCTGCTGCCTCTGAACACTGGGAAGCTGTGGCTCTGACCACCCAGGGATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp CCCCTGACCCTGAAGGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGATTACAAGGTATCAGTaGGAAGGGATCAAACGAGCT +
Preference number: 5 (lower is better)
Translates to: PLTLKDNLAMHLSIHHREITRYQ*EGIKRA
Trigger: AGCTCGTTTGATCCCTTCCAACTGATACCTTGTAAT...CTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCCTTCAGGGTCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGGTCTCCTCTGTTGGGTaGAGAGCTGCAGAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: KESITAFHRITQLRSLEGVSSVG*RAAEVL
Trigger: CAGAACCTCTGCAGCTCTCAACCCAACAGAGGAGAC...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTAGCTCAGGTTGGCATGTaGAAGCCACAGTCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLAQVGM*KPQSPL
Trigger: CAGAGGAGACTGTGGCTTCAACATGCCAACCTGAGC...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTCTGCTGTCTGCTGACTaGCGACTGGATGGCTTCAAC +
Preference number: 5 (lower is better)
Translates to: TENSINCCLLTCDWMASTLLSAD*RLDGFN
Trigger: GTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAG...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CCTGATCCCTGGGTGGTCAGAGCCACAGCTTCCCAGTGTTCAGAGGCAGCAGAAGAAGTGAAGATGATGTaGGCTATTCTAACTGCCTTT +
Preference number: 5 (lower is better)
Translates to: PDPWVVRATASQCSEAAEEVKMM*AILTAF
Trigger: AAAGGCAGTTAGAATAGCCAACATCATCTTCACTTC...TTCTGCTGCCTCTGAACACTGGGAAGCTGTGGCTCTGACCACCCAGGGATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp CTCTTGGCAACAACACTTGTCTGGGGTGAGGGAGGCAGGATTGTTTGGACACAGAGAGCCCCCTGTCTGTaGTTATCTGATCTAAGACAC +
Preference number: 5 (lower is better)
Translates to: LLATTLVWGEGGRIVWTQRAPCL*LSDLRH
Trigger: GTGTCTTAGATCAGATAACAACAGACAGGGGGCTCT...CTGTGTCCAAACAATCCTGCCTCCCTCACCCCAGACAAGTGTTGTTGCCAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp GGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGAAAATCAGGCAACGATTCTTCTGGGGTGTTaGAGAAGACAACTCGTCCAC +
Preference number: 5 (lower is better)
Translates to: GQSGHAPQYPPQRENQATILLGC*RRQLVH
Trigger: GTGGACGAGTTGTCTTCTCAAACACCCCAGAAGAAT...CGTTGCCTGATTTTCTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCATCTCTGATTCGTACTTaGTCAACTGTTTGTGGCCTA +
Preference number: 5 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPSLIRT*STVCGL
Trigger: TAGGCCACAAACAGTTGACAAAGTACGAATCAGAGA...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp AGAAATGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTGGCATGTTGAAGGTCCTTCTAAGTCCTTaGCATCACACCAGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: RNGRKVMQRRPAQVGMLKVLLSP*HHTSFP
Trigger: GGGGAAACTGGTGTGATGCAAAGGACTTAGAAGGAC...CTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCTCAGCCATAAAGCAATaGGTCACTTTGCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: RSESRRKILSMGTLLWESSAIKQ*VTLLRV
Trigger: GACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGA...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGTGGTGGACCCTGGTTaGCAGAACACTCTGATAATC +
Preference number: 5 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMVVDPG*QNTLII
Trigger: GATTATCAGAGTGTTCTGCAAACCAGGGTCCACCAC...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTAAGGCAGGTGTTCCTTaGAGACTCTGCCTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: TENSINCCLLTCDWMASTKAGVP*RLCLLN
Trigger: GTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTT...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CCTTTGGACTGTGTGGATCGACTCTCCACCTGTATTCCAGGTCCTTCCTCTAGCAGAGTGGAAATGCTCTaGACAGAAGATAGAGCACGT +
Preference number: 5 (lower is better)
Translates to: PLDCVDRLSTCIPGPSSSRVEML*TEDRAR
Trigger: ACGTGCTCTATCTTCTGTCAAGAGCATTTCCACTCT...GCTAGAGGAAGGACCTGGAATACAGGTGGAGAGTCGATCCACACAGTCCAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGATTCTTCTGGGGTGTTaGAGAAGACAACTCGTCCAC +
Preference number: 5 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMILLGC*RRQLVH
Trigger: GTGGACGAGTTGTCTTCTCAAACACCCCAGAAGAAT...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp CCTTTGGACTGTGTGGATCGACTCTCCACCTGTATTCCAGGTCCTTCCTCTAGCTCTCTGATTCGTACTTaGTCAACTGTTTGTGGCCTA +
Preference number: 5 (lower is better)
Translates to: PLDCVDRLSTCIPGPSSSSLIRT*STVCGL
Trigger: TAGGCCACAAACAGTTGACAAAGTACGAATCAGAGA...GCTAGAGGAAGGACCTGGAATACAGGTGGAGAGTCGATCCACACAGTCCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp TTGCTCAGTAAAGGACTAGAACACCGTGGTGGACCCTGGTTTGCAGAACACTCTCCTCTTCTCTTCTTTTaGCCAACTCCTCAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: LLSKGLEHRGGPWFAEHSPLLFF*PTPQQR
Trigger: TCTCTGCTGAGGAGTTGGCAAAAAGAAGAGAAGAGG...AGAGTGTTCTGCAAACCAGGGTCCACCACGGTGTTCTAGTCCTTTACTGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AGGTCAGAATCCCGGCGAAAGATTTTATCCATGGGGACGCTGCTATGGGAGAGCATTACAAGGTATCAGTaGGAAGGGATCAAACGAGCT +
Preference number: 5 (lower is better)
Translates to: RSESRRKILSMGTLLWESITRYQ*EGIKRA
Trigger: AGCTCGTTTGATCCCTTCCAACTGATACCTTGTAAT...GCTCTCCCATAGCAGCGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CTGAACACAACAGTAAAGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTAAGGCAGGTGTTCCTTaGAGACTCTGCCTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: LNTTVKPTRLLSFTAYSIKAGVP*RLCLLN
Trigger: GTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTT...AATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTACTGTTGTGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp GGACAATCTGGCCATGCACCTCAGTATCCACCACAGAGAGAAAATCAGGCAACGGGTGACCTGCTGCCATaGAATGTTTCAATCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GQSGHAPQYPPQRENQATGDLLP*NVSILL
Trigger: CAACAAGATTGAAACATTCAATGGCAGCAGGTCACC...CGTTGCCTGATTTTCTCTCTGTGGTGGATACTGAGGTGCATGGCCAGATTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp AGACAAGAGGATAGGATGAACTCTGGGGAGGCAGCAACTGCTTTGAGTCAAAGTCTTGCACCAGAGGATTaGATAAGAGCCATCTGGGCT +
Preference number: 5 (lower is better)
Translates to: RQEDRMNSGEAATALSQSLAPED*IRAIWA
Trigger: AGCCCAGATGGCTCTTATCAAATCCTCTGGTGCAAG...ACTTTGACTCAAAGCAGTTGCTGCCTCCCCAGAGTTCATCCTATCCTCTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS CCA 90 bp ATGATGTTGGCTATTCTAACTGCCTTTGTTGATCATGAATGTGCCTaGATAAAGCAGGACTTTGGCTCTGGATGCGCAGGGCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: MMLAILTAFVDHECA*IKQDFGSGCAGLWR
Trigger: TCTCCAGAGCCCTGCGCATCCAGAGCCAAAGTCCTGCTTTATCCAGGCACATTCATGATCAACAAAGGCAGTTAGAATAGCCAACATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp TGGACTGTGTGGATCGACTCTCCACCTGTATTCCAGGTCCTTCCTCTAGCTGGAAAATTTAGCCAGCCCTaGTTCAAACAGCTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: WTVWIDSPPVFQVLPLAGKFSQP*FKQLFF
Trigger: GAAAAAGAGCTGTTTGAACAAGGGCTGGCTAAATTT...TCCAGCTAGAGGAAGGACCTGGAATACAGGTGGAGAGTCGATCCACACAGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGGGCCGGTCTTCTGATTaGGTGTTTCTTTATCCAGAC +
Preference number: 5 (lower is better)
Translates to: KESITAFHRITQLRSLEGGRSSD*VFLYPD
Trigger: GTCTGGATAAAGAAACACCAAATCAGAAGACCGGCC...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTTTTACAGCATTCAAGTaGGGATCAGCACGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: TENSINCCLLTCDWMASTFTAFK*GSARPL
Trigger: AAGGGGACGTGCTGATCCCAACTTGAATGCTGTAAA...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp CTGCAGACGCTGGGCAAGTTGGTATGCTTCTACTGCATCTTTTCTGTCTCTGATTTTACAGCATTCAAGTaGGGATCAGCACGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: LQTLGKLVCFYCIFSVSDFTAFK*GSARPL
Trigger: AAGGGGACGTGCTGATCCCAACTTGAATGCTGTAAA...ATCAGAGACAGAAAAGATGCAGTAGAAGCATACCAACTTGCCCAGCGTCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR CAA 90 bp CTGAGTTGTCCTATTGAGGCAAGGACTCCAGGTATTTGTACTCCTATAGTTACCCAGACGCTGGGCAAGTaGGTATGCTTCTACTGCATC +
Preference number: 5 (lower is better)
Translates to: LSCPIEARTPGICTPIVTQTLGK*VCFYCI
Trigger: GATGCAGTAGAAGCATACCAACTTGCCCAGCGTCTG...GGTAACTATAGGAGTACAAATACCTGGAGTCCTTGCCTCAATAGGACAACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp AAGGTTTCTGAGGCCTGTGTTTGTGATACAGGATCCATCTCACACTGTAGTCCTGTCCTTCTAAGTCCTTaGCATCACACCAGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: KVSEACVCDTGSISHCSPVLLSP*HHTSFP
Trigger: GGGGAAACTGGTGTGATGCAAAGGACTTAGAAGGAC...AGGACTACAGTGTGAGATGGATCCTGTATCACAAACACAGGCCTCAGAAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGGGAGGAATTACAAGGTATCAGTaGGAAGGGATCAAACGAGCT +
Preference number: 5 (lower is better)
Translates to: TIGSSSSPHQDPGREMGGITRYQ*EGIKRA
Trigger: AGCTCGTTTGATCCCTTCCAACTGATACCTTGTAAT...TCCTCCCATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp AGAAATGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTGGCATGTTGAAGTCAGCCATAAAGCAATaGGTCACTTTGCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: RNGRKVMQRRPAQVGMLKSAIKQ*VTLLRV
Trigger: GACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGA...CTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGCAAGGCCCCAAACTCTaGACAAGTATCATCCTTGAG +
Preference number: 5 (lower is better)
Translates to: KESITAFHRITQLRSLEGQGPKL*TSIILE
Trigger: CTCAAGGATGATACTTGTCAAGAGTTTGGGGCCTTG...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCATGTGTGTGCTTTTCTTaGTGCTTGGATAAAAGAAGT +
Preference number: 5 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPCVCFS*CLDKRS
Trigger: ACTTCTTTTATCCAAGCACAAAGAAAAGCACACACA...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ATAGGCCCCCTCAGTTCTAGACTTCCTCTGTGCTTCTACAAGGCCCTGGCTCCATATTTATTCCCTCCCTaGTTCCAGGAAAAATGTAAG +
Preference number: 5 (lower is better)
Translates to: IGPLSSRLPLCFYKALAPYLFPP*FQEKCK
Trigger: CTTACATTTTTCCTGGAACAAGGGAGGGAATAAATA...TGGAGCCAGGGCCTTGTAGAAGCACAGAGGAAGTCTAGAACTGAGGGGGCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AGTTGGACAGTAAGAATCATCTGGTGGTCATTTCTGGCAGCCTTGAGTAGAACCTTTACAGCATTCAAGTaGGGATCAGCACGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: SWTVRIIWWSFLAALSRTFTAFK*GSARPL
Trigger: AAGGGGACGTGCTGATCCCAACTTGAATGCTGTAAA...GGTTCTACTCAAGGCTGCCAGAAATGACCACCAGATGATTCTTACTGTCCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp AGGGCTGTAAAACACACACACACACACACACACACACACACACACACAAAGAAGTTTACAGCATTCAAGTaGGGATCAGCACGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: RAVKHTHTHTHTHTHTKKFTAFK*GSARPL
Trigger: AAGGGGACGTGCTGATCCCAACTTGAATGCTGTAAA...CTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp AGAAATGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTGGCATGTTGAAGATCTTGCTTTTCATTTaGAAGACAGCCCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: RNGRKVMQRRPAQVGMLKILLFI*KTAPGR
Trigger: TCTTCCAGGGGCTGTCTTCAAAATGAAAAGCAAGAT...CTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp GTAAACATTATTAAAGGCAGGTGTTCCTTTGAGACTCTGCCTCCTGAACTTCCTCAGACGCTGGGCAAGTaGGTATGCTTCTACTGCATC +
Preference number: 5 (lower is better)
Translates to: VNIIKGRCSFETLPPELPQTLGK*VCFYCI
Trigger: GATGCAGTAGAAGCATACCAACTTGCCCAGCGTCTG...AGGAAGTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTTTAATAATGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp GTCAAGAATTCTTCAGCCATAAAGCAATTGGTCACTTTGCTCAGAGTCTTCCTCCAGACGCTGGGCAAGTaGGTATGCTTCTACTGCATC +
Preference number: 5 (lower is better)
Translates to: VKNSSAIKQLVTLLRVFLQTLGK*VCFYCI
Trigger: GATGCAGTAGAAGCATACCAACTTGCCCAGCGTCTG...GAGGAAGACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGAAGAATTCTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp GTAGTCCTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTGTCCTTCTAAGTCCTTaGCATCACACCAGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: VVLYSDCYMVLLHRLQLLVLLSP*HHTSFP
Trigger: GGGGAAACTGGTGTGATGCAAAGGACTTAGAAGGAC...AAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAGGACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTTCAGCCATAAAGCAATaGGTCACTTTGCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: TENSINCCLLTCDWMASTSAIKQ*VTLLRV
Trigger: GACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGA...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATAGTCTCCTCTGTTGGGTaGAGAGCTGCAGAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHKEECLIDIIVSSVG*RAAEVL
Trigger: CAGAACCTCTGCAGCTCTCAACCCAACAGAGGAGAC...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATAGCTCAGGTTGGCATGTaGAAGCCACAGTCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHKEECLIDIIAQVGM*KPQSPL
Trigger: CAGAGGAGACTGTGGCTTCAACATGCCAACCTGAGC...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATACTGCTGTCTGCTGACTaGCGACTGGATGGCTTCAAC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHKEECLIDIILLSAD*RLDGFN
Trigger: GTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAG...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp GTAGTCCTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTCTTGCACCAGAGGATTaGATAAGAGCCATCTGGGCT +
Preference number: 5 (lower is better)
Translates to: VVLYSDCYMVLLHRLQLLLAPED*IRAIWA
Trigger: AGCCCAGATGGCTCTTATCAAATCCTCTGGTGCAAG...AAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAGGACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR CAA 90 bp GTAGTCCTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTGGCCGGTCTTCTGATTaGGTGTTTCTTTATCCAGAC +
Preference number: 5 (lower is better)
Translates to: VVLYSDCYMVLLHRLQLLGRSSD*VFLYPD
Trigger: GTCTGGATAAAGAAACACCAAATCAGAAGACCGGCC...AAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAGGACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTATTCTTCTGGGGTGTTaGAGAAGACAACTCGTCCAC +
Preference number: 5 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSILLGC*RRQLVH
Trigger: GTGGACGAGTTGTCTTCTCAAACACCCCAGAAGAAT...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CTTCCCTTCCCCAGAGAACCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTAATCTTGCTTTTCATTTaGAAGACAGCCCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: LPFPREPKSGTIPPSGTLILLFI*KTAPGR
Trigger: TCTTCCAGGGGCTGTCTTCAAAATGAAAAGCAAGAT...TAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGGTTCTCTGGGGAAGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp AGAAATGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTGGCATGTTGAAGTACTTTGTCAACTGTTaGTGGCCTATTATACACAGC +
Preference number: 5 (lower is better)
Translates to: RNGRKVMQRRPAQVGMLKYFVNC*WPIIHS
Trigger: GCTGTGTATAATAGGCCACAAACAGTTGACAAAGTA...CTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp TGGCTTCTAGAAAACCTTAATTCTTGCACCAGAGGATTTGATAAGAGCCATCTGCAGACGCTGGGCAAGTaGGTATGCTTCTACTGCATC +
Preference number: 5 (lower is better)
Translates to: WLLENLNSCTRGFDKSHLQTLGK*VCFYCI
Trigger: GATGCAGTAGAAGCATACCAACTTGCCCAGCGTCTG...CAGATGGCTCTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTCTAGAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR CAA 90 bp TGTCCTATTGAGGCAAGGACTCCAGGTATTTGTACTCCTATAGTTACCAGTCATGTCCTTCTAAGTCCTTaGCATCACACCAGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: CPIEARTPGICTPIVTSHVLLSP*HHTSFP
Trigger: GGGGAAACTGGTGTGATGCAAAGGACTTAGAAGGAC...ATGACTGGTAACTATAGGAGTACAAATACCTGGAGTCCTTGCCTCAATAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGCAAACGAGCTTTTTGTaGGTCTTGGCACTTTTAAAG +
Preference number: 5 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMQTSFL*VLALLK
Trigger: CTTTAAAAGTGCCAAGACCAACAAAAAGCTCGTTTG...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTAAGCAATTGGTCACTTaGCTCAGAGTCTTCCTCATA +
Preference number: 5 (lower is better)
Translates to: TENSINCCLLTCDWMASTKQLVT*LRVFLI
Trigger: TATGAGGAAGACTCTGAGCAAAGTGACCAATTGCTT...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTTCACAGCCTACAGCATaGCTCAGTAAAGGACTAGAA +
Preference number: 5 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLSQPTA*LSKGLE
Trigger: TTCTAGTCCTTTACTGAGCAATGCTGTAGGCTGTGA...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp GGAATGGTTAGAAAACTAACCATTTCAAGTCCCAGAATATCAGAGTTCTGCATGATGCAGCTGCCTCCTTaGGACTGTGTGGATCGACTC +
Preference number: 5 (lower is better)
Translates to: GMVRKLTISSPRISEFCMMQLPP*DCVDRL
Trigger: GAGTCGATCCACACAGTCCAAAGGAGGCAGCTGCAT...CATGCAGAACTCTGATATTCTGGGACTTGAAATGGTTAGTTTTCTAACCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTGGCCGGTCTTCTGATTaGGTGTTTCTTTATCCAGAC +
Preference number: 5 (lower is better)
Translates to: YTPKVSANKSGQNPGERFGRSSD*VFLYPD
Trigger: GTCTGGATAAAGAAACACCAAATCAGAAGACCGGCC...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTGCTCAGTAAAGGACTAATGGTGTCCATGCCTTaGTCCCTTTATCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: SRPGCLVSQPTALLSKGLMVSMP*SLYLHF
Trigger: AAAATGAAGATAAAGGGACAAAGGCATGGACACCAT...TAGTCCTTTACTGAGCAATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTTTACAGCATTCAAGTaGGGATCAGCACGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: YTPKVSANKSGQNPGERFFTAFK*GSARPL
Trigger: AAGGGGACGTGCTGATCCCAACTTGAATGCTGTAAA...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AGACAAGAGGATAGGATGAACTCTGGGGAGGCAGCAACTGCTTTGAGTCAAAGTTACTTTGTCAACTGTTaGTGGCCTATTATACACAGC +
Preference number: 5 (lower is better)
Translates to: RQEDRMNSGEAATALSQSYFVNC*WPIIHS
Trigger: GCTGTGTATAATAGGCCACAAACAGTTGACAAAGTA...ACTTTGACTCAAAGCAGTTGCTGCCTCCCCAGAGTTCATCCTATCCTCTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR CAA 90 bp AAGGTTTCTGAGGCCTGTGTTTGTGATACAGGATCCATCTCACACTGTAGTCCTTCTCTGATTCGTACTTaGTCAACTGTTTGTGGCCTA +
Preference number: 5 (lower is better)
Translates to: KVSEACVCDTGSISHCSPSLIRT*STVCGL
Trigger: TAGGCCACAAACAGTTGACAAAGTACGAATCAGAGA...AGGACTACAGTGTGAGATGGATCCTGTATCACAAACACAGGCCTCAGAAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTTATCAAGTCCTTCTAAGTCCTTaGCATCACACCAGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: LYSDCYMVLLHRLQLLYQVLLSP*HHTSFP
Trigger: GGGGAAACTGGTGTGATGCAAAGGACTTAGAAGGAC...TTGATAAAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CTGAACACAACAGTAAAGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTAAGCAATTGGTCACTTaGCTCAGAGTCTTCCTCATA +
Preference number: 5 (lower is better)
Translates to: LNTTVKPTRLLSFTAYSIKQLVT*LRVFLI
Trigger: TATGAGGAAGACTCTGAGCAAAGTGACCAATTGCTT...AATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTACTGTTGTGTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp TGGCTTCTAGAAAACCTTAATTCTTGCACCAGAGGATTTGATAAGAGCCATCTGGTGGTGGACCCTGGTTaGCAGAACACTCTGATAATC +
Preference number: 5 (lower is better)
Translates to: WLLENLNSCTRGFDKSHLVVDPG*QNTLII
Trigger: GATTATCAGAGTGTTCTGCAAACCAGGGTCCACCAC...CAGATGGCTCTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTCTAGAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR CAA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATGTGGTGGACCCTGGTTaGCAGAACACTCTGATAATC +
Preference number: 5 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNVVDPG*QNTLII
Trigger: GATTATCAGAGTGTTCTGCAAACCAGGGTCCACCAC...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATGTAAAGCCGACCAGGTaGCTTAGTTTCACAGCCTAC +
Preference number: 5 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNVKPTR*LSFTAY
Trigger: GTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTAC...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CTGAACACAACAGTAAAGCCGACCAGGTTGCTTAGTTTCACAGCCTACAGCATTTCTCTAGATCAAGGGTaGGAGAATAATAGCCAACAG +
Preference number: 5 (lower is better)
Translates to: LNTTVKPTRLLSFTAYSISLDQG*ENNSQQ
Trigger: CTGTTGGCTATTATTCTCCAACCCTTGATCTAGAGA...AATGCTGTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTACTGTTGTGTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTTCTCTAGATCAAGGGTaGGAGAATAATAGCCAACAG +
Preference number: 5 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLSLDQG*ENNSQQ
Trigger: CTGTTGGCTATTATTCTCCAACCCTTGATCTAGAGA...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AAGGAATCAATCACTGCCTTTCACAGAATCACGCAACTTCGGAGCTTGGAAGGGTCCAGGTTATGTGTTTaGATTAAGGTCACACAGCAA +
Preference number: 5 (lower is better)
Translates to: KESITAFHRITQLRSLEGSRLCV*IKVTQQ
Trigger: TTGCTGTGTGACCTTAATCAAAACACATAACCTGGA...CCCTTCCAAGCTCCGAAGTTGCGTGATTCTGTGAAAGGCAGTGATTGATTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AGAAATGGGAGGAAGGTAATGCAGAGGAGACCTGCTCAGGTTGGCATGTTGAAGTGTGTGTGCTTTTCTTaGTGCTTGGATAAAAGAAGT +
Preference number: 5 (lower is better)
Translates to: RNGRKVMQRRPAQVGMLKCVCFS*CLDKRS
Trigger: ACTTCTTTTATCCAAGCACAAAGAAAAGCACACACA...CTTCAACATGCCAACCTGAGCAGGTCTCCTCTGCATTACCTTCCTCCCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ATCCTGACTATTGGTTCCTCCAGCTCACCTCATCAGGACCCAGGAAGAGAAATGTATTTATTCCCTCCCTaGTTCCAGGAAAAATGTAAG +
Preference number: 5 (lower is better)
Translates to: ILTIGSSSSPHQDPGREMYLFPP*FQEKCK
Trigger: CTTACATTTTTCCTGGAACAAGGGAGGGAATAAATA...CATTTCTCTTCCTGGGTCCTGATGAGGTGAGCTGGAGGAACCAATAGTCAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp TATAAACCATCAACAGTAGAGTTTCATAGTTCAGGTTCCCAGACAGACTCTGATGTGAGGGAGGCAGGATaGTTTGGACACAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: YKPSTVEFHSSGSQTDSDVREAG*FGHRKS
Trigger: GCTTTTCCTGTGTCCAAACAATCCTGCCTCCCTCAC...ATCAGAGTCTGTCTGGGAACCTGAACTATGAAACTCTACTGTTGATGGTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp CCTAAATCAGGAACGATTCCTCCTTCAGGTACTCTACTGTCCTCTGTCTATAGATTTTGGGAAGTACTCTaGGCAACAACACTTGTCTGG +
Preference number: 5 (lower is better)
Translates to: PKSGTIPPSGTLLSSVYRFWEVL*ATTLVW
Trigger: CCAGACAAGTGTTGTTGCCAAGAGTACTTCCCAAAA...TCTATAGACAGAGGACAGTAGAGTACCTGAAGGAGGAATCGTTCCTGATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTAAATTTAGCCAGCCCTaGTTCAAACAGCTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ISTENSINCCLLTCDWMAKFSQP*FKQLFF
Trigger: GAAAAAGAGCTGTTTGAACAAGGGCTGGCTAAATTT...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp AAGGTTTCTGAGGCCTGTGTTTGTGATACAGGATCCATCTCACACTGTAGTCCTAAATTTAGCCAGCCCTaGTTCAAACAGCTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: KVSEACVCDTGSISHCSPKFSQP*FKQLFF
Trigger: GAAAAAGAGCTGTTTGAACAAGGGCTGGCTAAATTT...AGGACTACAGTGTGAGATGGATCCTGTATCACAAACACAGGCCTCAGAAACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTATTAGCTTTGAAATTTaGGTCCATCTTCGGCCAAAT +
Preference number: 5 (lower is better)
Translates to: TENSINCCLLTCDWMASTISFEI*VHLRPN
Trigger: ATTTGGCCGAAGATGGACCAAAATTTCAAAGCTAAT...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTGGCTTCCAATTAGCTTaGAAATTTTGGTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLGFQLA*KFWSIF
Trigger: GAAGATGGACCAAAATTTCAAAGCTAATTGGAAGCC...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AAGGTTTCTGAGGCCTGTGTTTGTGATACAGGATCCATCTCACACTGTAGTCCTGGCTTCCAATTAGCTTaGAAATTTTGGTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: KVSEACVCDTGSISHCSPGFQLA*KFWSIF
Trigger: GAAGATGGACCAAAATTTCAAAGCTAATTGGAAGCC...AGGACTACAGTGTGAGATGGATCCTGTATCACAAACACAGGCCTCAGAAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AGACATAGTCCAAATCCCAAGCTGAACACAACAGTAAAGCCGACCAGGTTGCTTATGGTGTCCATGCCTTaGTCCCTTTATCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: RHSPNPKLNTTVKPTRLLMVSMP*SLYLHF
Trigger: AAAATGAAGATAAAGGGACAAAGGCATGGACACCAT...AAGCAACCTGGTCGGCTTTACTGTTGTGTTCAGCTTGGGATTTGGACTATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp GTAGTCCTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTATCTTGCTTTTCATTTaGAAGACAGCCCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: VVLYSDCYMVLLHRLQLLILLFI*KTAPGR
Trigger: TCTTCCAGGGGCTGTCTTCAAAATGAAAAGCAAGAT...AAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAGGACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CATGCCTCTCCTGGTCTCCTGTTAGATTTATTAATCAGTAGTTCTAAACCATATCAGACGCTGGGCAAGTaGGTATGCTTCTACTGCATC +
Preference number: 5 (lower is better)
Translates to: HASPGLLLDLLISSSKPYQTLGK*VCFYCI
Trigger: GATGCAGTAGAAGCATACCAACTTGCCCAGCGTCTG...ATATGGTTTAGAACTACTGATTAATAAATCTAACAGGAGACCAGGAGAGGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATCCTCTTCTCTTCTTTTaGCCAACTCCTCAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNPLLFF*PTPQQR
Trigger: TCTCTGCTGAGGAGTTGGCAAAAAGAAGAGAAGAGG...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ATTGGTCACTTTGCTCAGAGTCTTCCTCATACACTCCAAAAGTTTCTGCAAACACCTCTTCTCTTCTTTTaGCCAACTCCTCAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: IGHFAQSLPHTLQKFLQTPLLFF*PTPQQR
Trigger: TCTCTGCTGAGGAGTTGGCAAAAAGAAGAGAAGAGG...TGTTTGCAGAAACTTTTGGAGTGTATGAGGAAGACTCTGAGCAAAGTGACCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AGTTGGACAGTAAGAATCATCTGGTGGTCATTTCTGGCAGCCTTGAGTAGAACCCAAACGAGCTTTTTGTaGGTCTTGGCACTTTTAAAG +
Preference number: 5 (lower is better)
Translates to: SWTVRIIWWSFLAALSRTQTSFL*VLALLK
Trigger: CTTTAAAAGTGCCAAGACCAACAAAAAGCTCGTTTG...GGTTCTACTCAAGGCTGCCAGAAATGACCACCAGATGATTCTTACTGTCCAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp TCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTATCCTCAGCCATAAAGCAATaGGTCACTTTGCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: SKSFCKQVRSESRRKILSSAIKQ*VTLLRV
Trigger: GACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGA...GGATAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp GTAAACATTATTAAAGGCAGGTGTTCCTTTGAGACTCTGCCTCCTGAACTTCCTTCACAGCCTACAGCATaGCTCAGTAAAGGACTAGAA +
Preference number: 5 (lower is better)
Translates to: VNIIKGRCSFETLPPELPSQPTA*LSKGLE
Trigger: TTCTAGTCCTTTACTGAGCAATGCTGTAGGCTGTGA...AGGAAGTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTTTAATAATGTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ATTAGGATCAAAAGCAGGATGAGAATGATACCATCCAATAACACTGAAGCCTCTGTAAAGCCGACCAGGTaGCTTAGTTTCACAGCCTAC +
Preference number: 5 (lower is better)
Translates to: IRIKSRMRMIPSNNTEASVKPTR*LSFTAY
Trigger: GTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTAC...AGAGGCTTCAGTGTTATTGGATGGTATCATTCTCATCCTGCTTTTGATCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTGTTTTTAAGATTTTCTaGTCATGCCTCTCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: ISTENSINCCLLTCDWMAVFKIF*SCLSWS
Trigger: AGACCAGGAGAGGCATGACAAGAAAATCTTAAAAAC...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AAGGTTTCTGAGGCCTGTGTTTGTGATACAGGATCCATCTCACACTGTAGTCCTGTTTTTAAGATTTTCTaGTCATGCCTCTCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: KVSEACVCDTGSISHCSPVFKIF*SCLSWS
Trigger: AGACCAGGAGAGGCATGACAAGAAAATCTTAAAAAC...AGGACTACAGTGTGAGATGGATCCTGTATCACAAACACAGGCCTCAGAAACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ATTTCTACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCCAGGTTATGTGTTTaGATTAAGGTCACACAGCAA +
Preference number: 5 (lower is better)
Translates to: ISTENSINCCLLTCDWMASRLCV*IKVTQQ
Trigger: TTGCTGTGTGACCTTAATCAAAACACATAACCTGGA...AGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGTAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATCAAGGCCCCAAACTCTaGACAAGTATCATCCTTGAG +
Preference number: 5 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNQGPKL*TSIILE
Trigger: CTCAAGGATGATACTTGTCAAGAGTTTGGGGCCTTG...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ACTGAGAATTCCATCAACTGCTGTCTGCTGACTTGCGACTGGATGGCTTCAACTCTGAAGCAATGTAACTaGAACTGGAAACTGAAGATA +
Preference number: 5 (lower is better)
Translates to: TENSINCCLLTCDWMASTLKQCN*NWKLKI
Trigger: TATCTTCAGTTTCCAGTTCAAGTTACATTGCTTCAG...AGTTGAAGCCATCCAGTCGCAAGTCAGCAGACAGCAGTTGATGGAATTCTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AGTTCCTCTTACACTCTCAGCCCTCAAACTAATTGTTTTATAAGCTATACTTCAGTCTCCTCTGTTGGGTaGAGAGCTGCAGAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: SSSYTLSPQTNCFISYTSVSSVG*RAAEVL
Trigger: CAGAACCTCTGCAGCTCTCAACCCAACAGAGGAGAC...TGAAGTATAGCTTATAAAACAATTAGTTTGAGGGCTGAGAGTGTAAGAGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CTGAGTTGTCCTATTGAGGCAAGGACTCCAGGTATTTGTACTCCTATAGTTACCGGCTTCCAATTAGCTTaGAAATTTTGGTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: LSCPIEARTPGICTPIVTGFQLA*KFWSIF
Trigger: GAAGATGGACCAAAATTTCAAAGCTAATTGGAAGCC...GGTAACTATAGGAGTACAAATACCTGGAGTCCTTGCCTCAATAGGACAACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp TCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTATCCATCTTGCTTTTCATTTaGAAGACAGCCCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: SKSFCKQVRSESRRKILSILLFI*KTAPGR
Trigger: TCTTCCAGGGGCTGTCTTCAAAATGAAAAGCAAGAT...GGATAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ACAGCTATTAGAGCCCCCTGTCTGTTGTTATCTGATCTAAGACACCCTTCCCTTTGTTCACATCCAAAATaGATTGCTCCTATCAATTCG +
Preference number: 5 (lower is better)
Translates to: TAIRAPCLLLSDLRHPSLCSHPK*IAPINS
Trigger: CGAATTGATAGGAGCAATCAATTTTGGATGTGAACA...AAGGGAAGGGTGTCTTAGATCAGATAACAACAGACAGGGGGCTCTAATAGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp GATACAGGATCCATCTCACACTGTAGTCCTGTACTCAGACTGTTACATGGTTCTTACTTTGTCAACTGTTaGTGGCCTATTATACACAGC +
Preference number: 5 (lower is better)
Translates to: DTGSISHCSPVLRLLHGSYFVNC*WPIIHS
Trigger: GCTGTGTATAATAGGCCACAAACAGTTGACAAAGTA...AGAACCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCTGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp GTAAACATTATTAAAGGCAGGTGTTCCTTTGAGACTCTGCCTCCTGAACTTCCTTCTCTGATTCGTACTTaGTCAACTGTTTGTGGCCTA +
Preference number: 5 (lower is better)
Translates to: VNIIKGRCSFETLPPELPSLIRT*STVCGL
Trigger: TAGGCCACAAACAGTTGACAAAGTACGAATCAGAGA...AGGAAGTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTTTAATAATGTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp GTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCACAAACGAGCTTTTTGTaGGTCTTGGCACTTTTAAAG +
Preference number: 5 (lower is better)
Translates to: VLHGCFVSTKQSNINSRAQTSFL*VLALLK
Trigger: CTTTAAAAGTGCCAAGACCAACAAAAAGCTCGTTTG...TGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp GTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGGGCAGATCAAACGAGCTTTTaGTTGGTCTTGGCACTTTTA +
Preference number: 5 (lower is better)
Translates to: VLHGCFVSTKQSNINSRADQTSF*LVLALL
Trigger: TAAAAGTGCCAAGACCAACAAAAAGCTCGTTTGATC...TGCCCTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp ACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTAAGCAATTGGTCACTTaGCTCAGAGTCTTCCTCATA +
Preference number: 5 (lower is better)
Translates to: TLQKFLQTSQVRIPAKDFKQLVT*LRVFLI
Trigger: TATGAGGAAGACTCTGAGCAAAGTGACCAATTGCTT...AAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp TATTTAGCTTGTGTGTCAATATCTCGTAAGGAAGGATTAGGATCAAAAGCAGGAGTAAAGCCGACCAGGTaGCTTAGTTTCACAGCCTAC +
Preference number: 5 (lower is better)
Translates to: YLACVSISRKEGLGSKAGVKPTR*LSFTAY
Trigger: GTAGGCTGTGAAACTAAGCAACCTGGTCGGCTTTAC...TCCTGCTTTTGATCCTAATCCTTCCTTACGAGATATTGACACACAAGCTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTTAAATTTAGCCAGCCCTaGTTCAAACAGCTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: TLQKFLQTSQVRIPAKDFKFSQP*FKQLFF
Trigger: GAAAAAGAGCTGTTTGAACAAGGGCTGGCTAAATTT...AAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp TACACTCCAAAAGTTTCTGCAAACAAGTCAGGTCAGAATCCCGGCGAAAGATTTATGGTGTCCATGCCTTaGTCCCTTTATCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: YTPKVSANKSGQNPGERFMVSMP*SLYLHF
Trigger: AAAATGAAGATAAAGGGACAAAGGCATGGACACCAT...AAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTGGAGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp TTCTCCAAAAACTTAAGAAGAGTGACACACTATAGTACACGGGGTATTAAGCAAATTCTTCTGGGGTGTTaGAGAAGACAACTCGTCCAC +
Preference number: 5 (lower is better)
Translates to: FSKNLRRVTHYSTRGIKQILLGC*RRQLVH
Trigger: GTGGACGAGTTGTCTTCTCAAACACCCCAGAAGAAT...TTGCTTAATACCCCGTGTACTATAGTGTGTCACTCTTCTTAAGTTTTTGGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR CAA 90 bp TGGCTTCTAGAAAACCTTAATTCTTGCACCAGAGGATTTGATAAGAGCCATCTGTCTCTGATTCGTACTTaGTCAACTGTTTGTGGCCTA +
Preference number: 5 (lower is better)
Translates to: WLLENLNSCTRGFDKSHLSLIRT*STVCGL
Trigger: TAGGCCACAAACAGTTGACAAAGTACGAATCAGAGA...CAGATGGCTCTTATCAAATCCTCTGGTGCAAGAATTAAGGTTTTCTAGAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR CAA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATAAGCAATTGGTCACTTaGCTCAGAGTCTTCCTCATA +
Preference number: 5 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNKQLVT*LRVFLI
Trigger: TATGAGGAAGACTCTGAGCAAAGTGACCAATTGCTT...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp GTAGTCCTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACTTCAACTACTTCTGAAGCAATGTAACTaGAACTGGAAACTGAAGATA +
Preference number: 5 (lower is better)
Translates to: VVLYSDCYMVLLHRLQLLLKQCN*NWKLKI
Trigger: TATCTTCAGTTTCCAGTTCAAGTTACATTGCTTCAG...AAGTAGTTGAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAGGACTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665648.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATAGGCTTCCAATTAGCTTaGAAATTTTGGTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHKEECLIDIIGFQLA*KFWSIF
Trigger: GAAGATGGACCAAAATTTCAAAGCTAATTGGAAGCC...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp GTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTTCGGCTTCCAATTAGCTTaGAAATTTTGGTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: VKIQNTRLPYSVLRLLFFGFQLA*KFWSIF
Trigger: GAAGATGGACCAAAATTTCAAAGCTAATTGGAAGCC...GAAGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR CAA 90 bp AGTTCCTCTTACACTCTCAGCCCTCAAACTAATTGTTTTATAAGCTATACTTCAGGCCGGTCTTCTGATTaGGTGTTTCTTTATCCAGAC +
Preference number: 5 (lower is better)
Translates to: SSSYTLSPQTNCFISYTSGRSSD*VFLYPD
Trigger: GTCTGGATAAAGAAACACCAAATCAGAAGACCGGCC...TGAAGTATAGCTTATAAAACAATTAGTTTGAGGGCTGAGAGTGTAAGAGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp CGTGGTGGACCCTGGTTTGCAGAACACTCTGATAATCACTATATGAAAACAAATATGGTGTCCATGCCTTaGTCCCTTTATCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: RGGPWFAEHSDNHYMKTNMVSMP*SLYLHF
Trigger: AAAATGAAGATAAAGGGACAAAGGCATGGACACCAT...ATTTGTTTTCATATAGTGATTATCAGAGTGTTCTGCAAACCAGGGTCCACCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp GTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTTCTACTTTGTCAACTGTTaGTGGCCTATTATACACAGC +
Preference number: 5 (lower is better)
Translates to: VKIQNTRLPYSVLRLLFFYFVNC*WPIIHS
Trigger: GCTGTGTATAATAGGCCACAAACAGTTGACAAAGTA...GAAGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659108.1
ENST00000659812.1
CDS-3UTR CAA 90 bp CAGTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTCAAACGAGCTTTTTGTaGGTCTTGGCACTTTTAAAG +
Preference number: 5 (lower is better)
Translates to: QLRSKIHVFHTLSYACFSQTSFL*VLALLK
Trigger: CTTTAAAAGTGCCAAGACCAACAAAAAGCTCGTTTG...AGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR CAA 90 bp CAGTTAAGATCCAAAATACACGTCTTCCATACTCTGTCTTACGCCTGCTTTTCTGATCAAACGAGCTTTTaGTTGGTCTTGGCACTTTTA +
Preference number: 5 (lower is better)
Translates to: QLRSKIHVFHTLSYACFSDQTSF*LVLALL
Trigger: TAAAAGTGCCAAGACCAACAAAAAGCTCGTTTGATC...AGAAAAGCAGGCGTAAGACAGAGTATGGAAGACGTGTATTTTGGATCTTAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000659108.1
CDS-3UTR CAA 90 bp ATTAGGATCAAAAGCAGGATGAGAATGATACCATCCAATAACACTGAAGCCTCTATTACAAGGTATCAGTaGGAAGGGATCAAACGAGCT +
Preference number: 5 (lower is better)
Translates to: IRIKSRMRMIPSNNTEASITRYQ*EGIKRA
Trigger: AGCTCGTTTGATCCCTTCCAACTGATACCTTGTAAT...AGAGGCTTCAGTGTTATTGGATGGTATCATTCTCATCCTGCTTTTGATCCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATAGTTTTTAAGATTTTCTaGTCATGCCTCTCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHKEECLIDIIVFKIF*SCLSWS
Trigger: AGACCAGGAGAGGCATGACAAGAAAATCTTAAAAAC...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATATCCAGGTTATGTGTTTaGATTAAGGTCACACAGCAA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHKEECLIDIISRLCV*IKVTQQ
Trigger: TTGCTGTGTGACCTTAATCAAAACACATAACCTGGA...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp GTAAACATTATTAAAGGCAGGTGTTCCTTTGAGACTCTGCCTCCTGAACTTCCTTGTGTGTGCTTTTCTTaGTGCTTGGATAAAAGAAGT +
Preference number: 5 (lower is better)
Translates to: VNIIKGRCSFETLPPELPCVCFS*CLDKRS
Trigger: ACTTCTTTTATCCAAGCACAAAGAAAAGCACACACA...AGGAAGTTCAGGAGGCAGAGTCTCAAAGGAACACCTGCCTTTAATAATGTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGTGTTCACATCCAAAATaGATTGCTCCTATCAATTCG +
Preference number: 5 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQCSHPK*IAPINS
Trigger: CGAATTGATAGGAGCAATCAATTTTGGATGTGAACA...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000472487.6
ENST00000665648.1
CDS-3UTR CAA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCATCAGCCATAAAGCAATaGGTCACTTTGCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: IISVTTHPYLIYSHKQISSAIKQ*VTLLRV
Trigger: GACTCTGAGCAAAGTGACCAATTGCTTTATGGCTGA...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ATTGGCTTAAATGCAGATCATAATTCTGAGTTTTGGTGTCATTTGAAGATGACGTCACAGCCTACAGCATaGCTCAGTAAAGGACTAGAA +
Preference number: 5 (lower is better)
Translates to: IGLNADHNSEFWCHLKMTSQPTA*LSKGLE
Trigger: TTCTAGTCCTTTACTGAGCAATGCTGTAGGCTGTGA...CGTCATCTTCAAATGACACCAAAACTCAGAATTATGATCTGCATTTAAGCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ATTAGGATCAAAAGCAGGATGAGAATGATACCATCCAATAACACTGAAGCCTCTGTTTTTAAGATTTTCTaGTCATGCCTCTCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: IRIKSRMRMIPSNNTEASVFKIF*SCLSWS
Trigger: AGACCAGGAGAGGCATGACAAGAAAATCTTAAAAAC...AGAGGCTTCAGTGTTATTGGATGGTATCATTCTCATCCTGCTTTTGATCCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CATGCCTCTCCTGGTCTCCTGTTAGATTTATTAATCAGTAGTTCTAAACCATATTCTCTAGATCAAGGGTaGGAGAATAATAGCCAACAG +
Preference number: 5 (lower is better)
Translates to: HASPGLLLDLLISSSKPYSLDQG*ENNSQQ
Trigger: CTGTTGGCTATTATTCTCCAACCCTTGATCTAGAGA...ATATGGTTTAGAACTACTGATTAATAAATCTAACAGGAGACCAGGAGAGGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp TCATGTGTTACATGGCTGTTTTGTGAGCACAAAACAGAGCAACATCAATTCCAGCTGAAGCAATGTAACTaGAACTGGAAACTGAAGATA +
Preference number: 5 (lower is better)
Translates to: SCVTWLFCEHKTEQHQFQLKQCN*NWKLKI
Trigger: TATCTTCAGTTTCCAGTTCAAGTTACATTGCTTCAG...CTGGAATTGATGTTGCTCTGTTTTGTGCTCACAAAACAGCCATGTAACACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACAAAGAAGAATGTCTCATAGACATCATATATTTATTCCCTCCCTaGTTCCAGGAAAAATGTAAG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHKEECLIDIIYLFPP*FQEKCK
Trigger: CTTACATTTTTCCTGGAACAAGGGAGGGAATAAATA...TATGATGTCTATGAGACATTCTTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS-3UTR CAA 90 bp GGAATGGTTAGAAAACTAACCATTTCAAGTCCCAGAATATCAGAGTTCTGCATGATTTGCAAGAGTTTTTaGGGAAGTACTCTTGGCAAC +
Preference number: 5 (lower is better)
Translates to: GMVRKLTISSPRISEFCMICKSF*GSTLGN
Trigger: GTTGCCAAGAGTACTTCCCAAAAAACTCTTGCAAAT...CATGCAGAACTCTGATATTCTGGGACTTGAAATGGTTAGTTTTCTAACCATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS TCA 90 bp TTGTGCTTTTTATTTAGATTCCTCCCACGTAACACCTGTAAATTATaGAGTGAGAAGAACTTTTACATGTTCCAACTCTGTGCCCTTGGA +
Preference number: 5 (lower is better)
Translates to: LCFLFRFLPRNTCKL*SEKNFYMFQLCALG
Trigger: TCCAAGGGCACAGAGTTGGAACATGTAAAAGTTCTTCTCACTTCATAATTTACAGGTGTTACGTGGGAGGAATCTAAATAAAAAGCACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489282.1
CDS-3UTR CAA 90 bp GGCAACGCATCAAGAAGATACATTACTAAGAGGGTTAAGATATTAATAGAGGGTTACTTTGTCAACTGTTaGTGGCCTATTATACACAGC +
Preference number: 5 (lower is better)
Translates to: GNASRRYITKRVKILIEGYFVNC*WPIIHS
Trigger: GCTGTGTATAATAGGCCACAAACAGTTGACAAAGTA...ACCCTCTATTAATATCTTAACCCTCTTAGTAATGTATCTTCTTGATGCGTTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp GGCAACGCATCAAGAAGATACATTACTAAGAGGGTTAAGATATTAATAGAGGGTGATCAAACGAGCTTTTaGTTGGTCTTGGCACTTTTA +
Preference number: 5 (lower is better)
Translates to: GNASRRYITKRVKILIEGDQTSF*LVLALL
Trigger: TAAAAGTGCCAAGACCAACAAAAAGCTCGTTTGATC...ACCCTCTATTAATATCTTAACCCTCTTAGTAATGTATCTTCTTGATGCGTTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655340.1
CDS-3UTR CAA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCAAAGCAATTGGTCACTTaGCTCAGAGTCTTCCTCATA +
Preference number: 5 (lower is better)
Translates to: IISVTTHPYLIYSHKQISKQLVT*LRVFLI
Trigger: TATGAGGAAGACTCTGAGCAAAGTGACCAATTGCTT...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp CATGCCTCTCCTGGTCTCCTGTTAGATTTATTAATCAGTAGTTCTAAACCATATTGTTCACATCCAAAATaGATTGCTCCTATCAATTCG +
Preference number: 5 (lower is better)
Translates to: HASPGLLLDLLISSSKPYCSHPK*IAPINS
Trigger: CGAATTGATAGGAGCAATCAATTTTGGATGTGAACA...ATATGGTTTAGAACTACTGATTAATAAATCTAACAGGAGACCAGGAGAGGCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp TATTTAGCTTGTGTGTCAATATCTCGTAAGGAAGGATTAGGATCAAAAGCAGGATGTTCACATCCAAAATaGATTGCTCCTATCAATTCG +
Preference number: 5 (lower is better)
Translates to: YLACVSISRKEGLGSKAGCSHPK*IAPINS
Trigger: CGAATTGATAGGAGCAATCAATTTTGGATGTGAACA...TCCTGCTTTTGATCCTAATCCTTCCTTACGAGATATTGACACACAAGCTAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ATTATTTCGATTATAGGGACTAACAATCATCCCAATGAACTTTGCACCTCCTCTTGTTCACATCCAAAATaGATTGCTCCTATCAATTCG +
Preference number: 5 (lower is better)
Translates to: IISIIGTNNHPNELCTSSCSHPK*IAPINS
Trigger: CGAATTGATAGGAGCAATCAATTTTGGATGTGAACA...AGAGGAGGTGCAAAGTTCATTGGGATGATTGTTAGTCCCTATAATCGAAATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000659108.1
ENST00000659812.1
ENST00000665648.1
CDS-3UTR CAA 90 bp ATTATCTCAGTGACCACCCATCCATATCTCATTTATAGCCATAAACAAATCTCAGATCAAACGAGCTTTTaGTTGGTCTTGGCACTTTTA +
Preference number: 5 (lower is better)
Translates to: IISVTTHPYLIYSHKQISDQTSF*LVLALL
Trigger: TAAAAGTGCCAAGACCAACAAAAAGCTCGTTTGATC...TGAGATTTGTTTATGGCTATAAATGAGATATGGATGGGTGGTCACTGAGATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000659108.1
ENST00000665648.1
CDS-3UTR CAA 90 bp AGTTCCTCTTACACTCTCAGCCCTCAAACTAATTGTTTTATAAGCTATACTTCAGTTTTTAAGATTTTCTaGTCATGCCTCTCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: SSSYTLSPQTNCFISYTSVFKIF*SCLSWS
Trigger: AGACCAGGAGAGGCATGACAAGAAAATCTTAAAAAC...TGAAGTATAGCTTATAAAACAATTAGTTTGAGGGCTGAGAGTGTAAGAGGAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000472487.6
ENST00000622766.1
ENST00000665648.1
CDS CAA 72 bp TGTAAAACAGTGCGGCTTCCAATTAGCTTTGAAATTTaGGTCCATCTTCGGCCAAATTTAGCCAGCCCTTGT +
Preference number: 6 (lower is better)
Translates to: CKTVRLPISFEI*VHLRPNLASPC
Trigger: ACAAGGGCTGGCTAAATTTGGCCGAAGATGGACCAAAATTTCAAAGCTAATTGGAAGCCGCACTGTTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401044.7
ENST00000472487.6
ENST00000493821.6
ENST00000655340.1
ENST00000659812.1
ENST00000660611.1
ENST00000665648.1
CDS TCA 72 bp TTATTTAGATTCCTCCCACGTAACACCTGTAAATTATaGAGTGAGAAGAACTTTTACATGTTCCAACTCTGT +
Preference number: 6 (lower is better)
Translates to: LFRFLPRNTCKL*SEKNFYMFQLC
Trigger: ACAGAGTTGGAACATGTAAAAGTTCTTCTCACTTCATAATTTACAGGTGTTACGTGGGAGGAATCTAAATAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489282.1