RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYOZ3 (Homo sapiens)

Ensembl gene IDs: ENSG00000164591

Ensembl transcript IDs: ENST00000297130.4, ENST00000456566.2, ENST00000517768.6, ENST00000517861.1, ENST00000520112.1, ENST00000521300.1, ENST00000523553.1, ENST00000524256.1, ENST00000615557.1

Found 457 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACCTACCAGGTGCGGAGGCGCTGTTCCAGCCAGAGCTCAGTCAATaGATAGAAAGCGCTGGGGACAGAGCCTGGCCTGCAGAAAGTGCT +
Preference number: 1 (lower is better)
Translates to: HLPGAEALFQPELSQ*IESAGDRAWPAESA
Trigger: AGCACTTTCTGCAGGCCAGGCTCTGTCCCCAGCGCTTTCTATTCATTGACTGAGCTCTGGCTGGAACAGCGCCTCCGCACCTGGTAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523553.1
3UTR TCA 90 bp TCCAAGATGTGCGGCACCTTCACTCTTCATTTCTCCCACGTTAACTaGGCACCTACCAGGTGCGGAGGCGCTGTTCCAGCCAGAGCTCAG +
Preference number: 1 (lower is better)
Translates to: SKMCGTFTLHFSHVN*APTRCGGAVPARAQ
Trigger: CTGAGCTCTGGCTGGAACAGCGCCTCCGCACCTGGTAGGTGCTCAGTTAACGTGGGAGAAATGAAGAGTGAAGGTGCCGCACATCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523553.1
3UTR GCA 90 bp GAAGGAATCTTAATAAGCACCCCACTTTGCACCTGTCCTGTTAGGTaGCCAGTGGGTGGCCCCTTCTCTCCATTCCCATGGCCTCATCCC +
Preference number: 1 (lower is better)
Translates to: EGILISTPLCTCPVR*PVGGPFSPFPWPHP
Trigger: GGGATGAGGCCATGGGAATGGAGAGAAGGGGCCACCCACTGGGCACCTAACAGGACAGGTGCAAAGTGGGGTGCTTATTAAGATTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 90 bp ATCCCTTGCAGGCTTCCTGGCTTCTGGCATTACCCTTCTCCAATATaGGCCCCACACAGCACCCAGCAAGACCCATCACTAAAACCTTCC +
Preference number: 1 (lower is better)
Translates to: IPCRLPGFWHYPSPI*APHSTQQDPSLKPS
Trigger: GGAAGGTTTTAGTGATGGGTCTTGCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAAGCCTGCAAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 90 bp TCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTaGACATGCTGGTCCACTTTCCAGAAATACCCTCCCCCTCACACC +
Preference number: 1 (lower is better)
Translates to: SLLQNTLHPCSVPYF*TCWSTFQKYPPPHT
Trigger: GGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGACCAGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 90 bp TTGCAATCAGGTTTTGTGTGTGAAGGCCCTTCTTCAACTGTGAAGTaGTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCCCCGAGA +
Preference number: 1 (lower is better)
Translates to: LQSGFVCEGPSSTVK*CPQVLAPDVTRPPR
Trigger: TCTCGGGGGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGAAGGGCCTTCACACACAAAACCTGATTGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 90 bp AGTGGCAGAGTTAGAACCTACCCCATCCAGTCTGACTCCCAAGCCTaGACTCAACTTCTAAACTCCAAGGCAGGGCATCACAGTCAGATG +
Preference number: 1 (lower is better)
Translates to: SGRVRTYPIQSDSQA*TQLLNSKAGHHSQM
Trigger: CATCTGACTGTGATGCCCTGCCTTGGAGTTTAGAAGTTGAGTGCAGGCTTGGGAGTCAGACTGGATGGGGTAGGTTCTAACTCTGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR TCA 90 bp GCAATGAGAGGCTTTCCTTCAGGCTTCAGCTTTAGTGACCCCCAGTaGCATCTTAGCAGCCAGCTTCTCATGCTGCATCCAGTGCAAGAA +
Preference number: 1 (lower is better)
Translates to: AMRGFPSGFSFSDPQ*HLSSQLLMLHPVQE
Trigger: TTCTTGCACTGGATGCAGCATGAGAAGCTGGCTGCTAAGATGTCACTGGGGGTCACTAAAGCTGAAGCCTGAAGGAAAGCCTCTCATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 90 bp TCAGCTTTAGTGACCCCCAGTGACATCTTAGCAGCCAGCTTCTCATaGTGCATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAG +
Preference number: 1 (lower is better)
Translates to: SALVTPSDILAASFS*CIQCKNNFSSLEQQ
Trigger: CTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGATGCAGCATGAGAAGCTGGCTGCTAAGATGTCACTGGGGGTCACTAAAGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR TCA 90 bp CAAGGCAGGGCATCACAGTCAGATGATTTCAGAGCGAGTGGGCATTaGCCACCCAGTGCACTGAAAAGAGACATCCACTGGAATCAGATT +
Preference number: 1 (lower is better)
Translates to: QGRASQSDDFRASGH*PPSALKRDIHWNQI
Trigger: AATCTGATTCCAGTGGATGTCTCTTTTCAGTGCACTGGGTGGTCAATGCCCACTCGCTCTGAAATCATCTGACTGTGATGCCCTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR TCA 90 bp AGTCAGATGATTTCAGAGCGAGTGGGCATTGACCACCCAGTGCACTaGAAAGAGACATCCACTGGAATCAGATTCCCATTTGGTGTCTGC +
Preference number: 1 (lower is better)
Translates to: SQMISERVGIDHPVH*KETSTGIRFPFGVC
Trigger: GCAGACACCAAATGGGAATCTGATTCCAGTGGATGTCTCTTTTCAGTGCACTGGGTGGTCAATGCCCACTCGCTCTGAAATCATCTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 90 bp CTTCCAGAATCCCATCTCACACCTAGGGTGAGGGACTCCTTCTTCTaGTCCACAACACTTTGTTCCTCAATTGTCAATAAGCATGCTTTA +
Preference number: 1 (lower is better)
Translates to: LPESHLTPRVRDSFF*STTLCSSIVNKHAL
Trigger: TAAAGCATGCTTATTGACAATTGAGGAACAAAGTGTTGTGGAGCAGAAGAAGGAGTCCCTCACCCTAGGTGTGAGATGGGATTCTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR CCA 90 bp ATTCTTGAATGGCTGGTCTTCAGCTCATGGAAACCTGGCTTTAAATaGCAGCCCCCAAATTCAAGAGAAAACACCAATTGCAAGCAATTC +
Preference number: 1 (lower is better)
Translates to: ILEWLVFSSWKPGFK*QPPNSRENTNCKQF
Trigger: GAATTGCTTGCAATTGGTGTTTTCTCTTGAATTTGGGGGCTGCCATTTAAAGCCAGGTTTCCATGAGCTGAAGACCAGCCATTCAAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 90 bp TCAATTGTCAATAAGCATGCTTTAGGGAAAATTATGGTGACTTCATaGTCTATAATGTCTTCCCTACTGTCTTTTCCTCCTCGAGGCCCG +
Preference number: 1 (lower is better)
Translates to: SIVNKHALGKIMVTS*SIMSSLLSFPPRGP
Trigger: CGGGCCTCGAGGAGGAAAAGACAGTAGGGAAGACATTATAGAGCATGAAGTCACCATAATTTTCCCTAAAGCATGCTTATTGACAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 90 bp AGGTGTGGATGTGGACTCCTAATGACACAAACCATGGATAAGTTATaGTGGAATCACCTGGAGTACTGGTTGCTATTTATTTATTTACTT +
Preference number: 1 (lower is better)
Translates to: RCGCGLLMTQTMDKL*WNHLEYWLLFIYLL
Trigger: AAGTAAATAAATAAATAGCAACCAGTACTCCAGGTGATTCCAGCATAACTTATCCATGGTTTGTGTCATTAGGAGTCCACATCCACACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp CTCCTCGAGGCCCGGGCCTGGCAGTGTCTAGCGCACAGTCAGCGCTTAGGAACTTTGTCCAGGCTGGGGTaGAGTGGCGCAATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: LLEARAWQCLAHSQRLGTLSRLG*SGAISA
Trigger: AGCCGAGATTGCGCCACTGCACCCCAGCCTGGACAA...AGTTCCTAAGCGCTGACTGTGCGCTAGACACTGCCAGGCCCGGGCCTCGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCCCCAGGCTGGGGTGCAGTaGCGCAATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LSRNTLPLTPPSWTLTPPQAGVQ*RNLGSL
Trigger: CAGTGAGCCGAGATTGCGCCACTGCACCCCAGCCTG...GGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCTTGTCCAGGCTGGGGTaGAGTGGCGCAATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPILSRLG*SGAISA
Trigger: AGCCGAGATTGCGCCACTGCACCCCAGCCTGGACAA...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR CAA 90 bp TGCCCAGTGGGTGGCCCCTTCTCTCCATTCCCATGGCCTCATCCCTaGCAGGCTTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGC +
Preference number: 2 (lower is better)
Translates to: CPVGGPFSPFPWPHP*QASWLLALPFSNMR
Trigger: GCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAAGCCTGCAAGGGATGAGGCCATGGGAATGGAGAGAAGGGGCCACCCACTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCCTACCCCATCCAGTCTaGCTCCCAAGCCTGCACTCA +
Preference number: 2 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPILPHPV*LPSLHS
Trigger: TGAGTGCAGGCTTGGGAGTCAGACTGGATGGGGTAG...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCCTCTGTTGTCCAGGCTaGGGTGCAGTGGCGCAATCT +
Preference number: 2 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPILCCPG*GAVAQS
Trigger: AGATTGCGCCACTGCACCCCAGCCTGGACAACAGAG...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp CTCCTCGAGGCCCGGGCCTGGCAGTGTCTAGCGCACAGTCAGCGCTTAGGAACTTTATTCACAGGAAGATaGGGTGCCAGTGAGCACCCT +
Preference number: 2 (lower is better)
Translates to: LLEARAWQCLAHSQRLGTLFTGR*GASEHP
Trigger: AGGGTGCTCACTGGCACCCCATCTTCCTGTGAATAA...AGTTCCTAAGCGCTGACTGTGCGCTAGACACTGCCAGGCCCGGGCCTCGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGACTCGAGGCCCGGGCCTaGCAGTGTCTAGCGCACAGT +
Preference number: 2 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRLEARA*QCLAHS
Trigger: ACTGTGCGCTAGACACTGCCAGGCCCGGGCCTCGAG...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp TATCCAAGATGTGCGGCACCTTCACTCTTCATTTCTCCCACGTTAACTGAGCACCTCCCGCTGTGGCTGTaGCTGGCTTCCCGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: YPRCAAPSLFISPTLTEHLPLWL*LASRPS
Trigger: GGAGGGGCGGGAAGCCAGTCACAGCCACAGCGGGAG...GTGCTCAGTTAACGTGGGAGAAATGAAGAGTGAAGGTGCCGCACATCTTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523553.1
3UTR-3UTR CCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCAGGCTGGGGTGCAGTaGCGCAATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFQAGVQ*RNLGSL
Trigger: CAGTGAGCCGAGATTGCGCCACTGCACCCCAGCCTG...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCTGTTGTCCAGGCTaGGGTGCAGTGGCGCAATCT +
Preference number: 2 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRLCCPG*GAVAQS
Trigger: AGATTGCGCCACTGCACCCCAGCCTGGACAACAGAG...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCCTCACACCCCCTTCATaGACTCTCACGCCTCCCACA +
Preference number: 2 (lower is better)
Translates to: FLASGITLLQYAPHTAPSLTPPS*TLTPPT
Trigger: TGTGGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAG...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp TGTCCTGGAGAATATCCAAGATGTGCGGCACCTTCACTCTTCATTTCTCCCACGCGCTGTGGCTGTGACTaGCTTCCCGCCCCTCCCGGT +
Preference number: 2 (lower is better)
Translates to: CPGEYPRCAAPSLFISPTRCGCD*LPAPPG
Trigger: ACCGGGAGGGGCGGGAAGCCAGTCACAGCCACAGCG...CGTGGGAGAAATGAAGAGTGAAGGTGCCGCACATCTTGGATATTCTCCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523553.1
3UTR-3UTR TCA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCGACCACCCAGTGCACTaGAAAGAGACATCCACTGGA +
Preference number: 2 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPIDHPVH*KETSTG
Trigger: TCCAGTGGATGTCTCTTTTCAGTGCACTGGGTGGTC...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAACCTGTCCTGTTAGGTaGCCAGTGGGTGGCCCCTTC +
Preference number: 2 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRTCPVR*PVGGPF
Trigger: GAAGGGGCCACCCACTGGGCACCTAACAGGACAGGT...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp CCCGCCCACCATGTCCTGGAGAATATCCAAGATGTGCGGCACCTTCACTCTTCACTGGCCTGCAGAAAGTaGTCAGGAAACGCAGGCTCC +
Preference number: 2 (lower is better)
Translates to: PAHHVLENIQDVRHLHSSLACRK*SGNAGS
Trigger: GGAGCCTGCGTTTCCTGAGCACTTTCTGCAGGCCAG...TGAAGAGTGAAGGTGCCGCACATCTTGGATATTCTCCAGGACATGGTGGGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523553.1
3UTR-3UTR CCA 90 bp TCTCACGCCTCCCACAAGGTCCCACTCAAATCCTTCAGGAAGCTTCCAGAATCCCCAGGCCCCCGAGACTaGGGAACTGAAGATTCAGGC +
Preference number: 2 (lower is better)
Translates to: SHASHKVPLKSFRKLPESPGPRD*GTEDSG
Trigger: GCCTGAATCTTCAGTTCCCCAGTCTCGGGGGCCTGG...GGATTCTGGAAGCTTCCTGAAGGATTTGAGTGGGACCTTGTGGGAGGCGTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGACCAGGCCCCCGAGACTaGGGAACTGAAGATTCAGGC +
Preference number: 2 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRPGPRD*GTEDSG
Trigger: GCCTGAATCTTCAGTTCCCCAGTCTCGGGGGCCTGG...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCCTATCCCACACACCCTaGGAATGGGCTGGACTCCTG +
Preference number: 2 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSLSHTP*EWAGLL
Trigger: CAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAG...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGACTACCCCATCCAGTCTaGCTCCCAAGCCTGCACTCA +
Preference number: 2 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRLPHPV*LPSLHS
Trigger: TGAGTGCAGGCTTGGGAGTCAGACTGGATGGGGTAG...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCTTTAGTGACCCCCAGTaGCATCTTAGCAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPIFSDPQ*HLSSQL
Trigger: AAGCTGGCTGCTAAGATGTCACTGGGGGTCACTAAA...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCTTCTGCAGAACACCCTaGACCCGTGCTCAGTTCCAT +
Preference number: 2 (lower is better)
Translates to: FLASGITLLQYAPHTAPSFCRTP*TRAQFH
Trigger: ATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAA...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCATAAGCACCCCACTTTaGACCTGTCCTGTTAGGTGC +
Preference number: 2 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPIISTPL*TCPVRC
Trigger: GCACCTAACAGGACAGGTGCAAAGTGGGGTGCTTAT...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp CCCGCCCACCATGTCCTGGAGAATATCCAAGATGTGCGGCACCTTCACTCTTCAATGAATAGAAAGCGCTaGGGACAGAGCCTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: PAHHVLENIQDVRHLHSSMNRKR*GQSLAC
Trigger: GCAGGCCAGGCTCTGTCCCCAGCGCTTTCTATTCAT...TGAAGAGTGAAGGTGCCGCACATCTTGGATATTCTCCAGGACATGGTGGGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523553.1
3UTR-3UTR TCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGACGACTCAGGAGACTCTaGTGCTGCAAGTCTGGGACA +
Preference number: 2 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRRLRRL*CCKSGT
Trigger: TGTCCCAGACTTGCAGCATCAGAGTCTCCTGAGTCG...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCGACTCAGGAGACTCTaGTGCTGCAAGTCTGGGACA +
Preference number: 2 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFRLRRL*CCKSGT
Trigger: TGTCCCAGACTTGCAGCATCAGAGTCTCCTGAGTCG...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCCCAGGGACTCCTTCTTCTaGTCCACAACACTTTGTTCC +
Preference number: 2 (lower is better)
Translates to: LSRNTLPLTPPSWTLTPPRDSFF*STTLCS
Trigger: GGAACAAAGTGTTGTGGAGCAGAAGAAGGAGTCCCT...GGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGATACCCTTCTCCAATATaGGCCCCACACAGCACCCAG +
Preference number: 2 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRYPSPI*APHSTQ
Trigger: CTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTA...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp CCTTCTCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACTCACACCCCCTTCATaGACTCTCACGCCTCCCACA +
Preference number: 2 (lower is better)
Translates to: PSPFCRTPCTRAQFHIFALTPPS*TLTPPT
Trigger: TGTGGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAG...TGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR CAA 90 bp CTCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTaGCACATGCTGGTCCACTTTCCAGAAATACCCTCCCCCTCACAC +
Preference number: 2 (lower is better)
Translates to: LPSAEHPAPVLSSIF*HMLVHFPEIPSPSH
Trigger: GTGTGAGGGGGAGGGTATTTCTGGAAAGTGGACCAGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp TCTCACGCCTCCCACAAGGTCCCACTCAAATCCTTCAGGAAGCTTCCAGAATCCATCTCACACCTAGGGTaGGGGACTCCTTCTTCTGCT +
Preference number: 2 (lower is better)
Translates to: SHASHKVPLKSFRKLPESISHLG*GTPSSA
Trigger: AGCAGAAGAAGGAGTCCCTCACCCTAGGTGTGAGAT...GGATTCTGGAAGCTTCCTGAAGGATTTGAGTGGGACCTTGTGGGAGGCGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCGGCATCACAGTCAGATaGTTTCAGAGCGAGTGGGCA +
Preference number: 2 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFGITVR*FQSEWA
Trigger: TGCCCACTCGCTCTGAAATCATCTGACTGTGATGCC...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGACCCAGAAGGGGAGTaGAACTCCAGAGCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRDPEGE*NSRAKG
Trigger: TCCTTTTGCTCTGGAGTTTCACTCCCCTTCTGGGTC...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAACAGCAGAACCAACCTaGGGCAACTGGAGTCCTCTT +
Preference number: 2 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRTAEPT*GNWSPL
Trigger: AAGAGGACTCCAGTTGCCTCAGGTTGGTTCTGCTGT...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCAACACCCTGCACCCGTaGTCAGTTCCATATTTTTGC +
Preference number: 2 (lower is better)
Translates to: FLASGITLLQYAPHTAPSNTLHP*SVPYFC
Trigger: GCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTT...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp CCTTCTCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCAGCTGTCCACAAGTCTTaGCTCCGGATGTTACCAGGC +
Preference number: 2 (lower is better)
Translates to: PSPFCRTPCTRAQFHIFAAVHKS*LRMLPG
Trigger: GCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGC...TGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCGACAGTCCAGTTGTCTaGATTTGGAACAACATCCCC +
Preference number: 2 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRDSPVV*IWNNIP
Trigger: GGGGATGTTGTTCCAAATCCAGACAACTGGACTGTC...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCCTATTTTGGCCAGACTaGTCTCAAACTCCTGACCTC +
Preference number: 2 (lower is better)
Translates to: FLASGITLLQYAPHTAPSLFWPD*SQTPDL
Trigger: GAGGTCAGGAGTTTGAGACCAGTCTGGCCAAAATAG...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCGAAAGAGCAGAGGTGTaGATGTGGACTCCTAATGAC +
Preference number: 2 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRERAEV*MWTPND
Trigger: GTCATTAGGAGTCCACATCCACACCTCTGCTCTTTC...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp CGCCCACCATGTCCTGGAGAATATCCAAGATGTGCGGCACCTTCACTCTTCATTCCAGAGCTCAGTCAATaGATAGAAAGCGCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: RPPCPGEYPRCAAPSLFIPELSQ*IESAGD
Trigger: GTCCCCAGCGCTTTCTATTCATTGACTGAGCTCTGG...AATGAAGAGTGAAGGTGCCGCACATCTTGGATATTCTCCAGGACATGGTGGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523553.1
3UTR-3UTR CCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGCTGTTAGGTGCCCAGTaGGTGGCCCCTTCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQLLGAQ*VAPSLH
Trigger: ATGGAGAGAAGGGGCCACCCACTGGGCACCTAACAG...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGCACACACCCTGGGAATaGGCTGGACTCCTGACCTTC +
Preference number: 2 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQHTPWE*AGLLTF
Trigger: GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTG...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGCTATCCCACACACCCTaGGAATGGGCTGGACTCCTG +
Preference number: 2 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQLSHTP*EWAGLL
Trigger: CAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAG...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGAGAGCGAGTGGGCATTaGCCACCCAGTGCACTGAAA +
Preference number: 2 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQRASGH*PPSALK
Trigger: TTTCAGTGCACTGGGTGGTCAATGCCCACTCGCTCT...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCAGAGCAGCAGTTGCATaGAACCTACCATTGACTGAG +
Preference number: 2 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFRAAVA*NLPLTE
Trigger: CTCAGTCAATGGTAGGTTTCATGCAACTGCTGCTCT...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCTCTTCAACTGTGAAGTaGTGTCCACAAGTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSSSTVK*CPQVLA
Trigger: AGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGA...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAAGGGACTCCTTCTTCTaGTCCACAACACTTTGTTCC +
Preference number: 2 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRRDSFF*STTLCS
Trigger: GGAACAAAGTGTTGTGGAGCAGAAGAAGGAGTCCCT...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCGGGGTTCCACTATTTTaGCCAGACTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFGVPLF*PDWSQT
Trigger: AGTTTGAGACCAGTCTGGCCAAAATAGTGGAACCCC...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAATCAGGTTTTGTGTGTaGAGGCCCTTCTTCAACTGT +
Preference number: 2 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRIRFCV*RPFFNC
Trigger: ACAGTTGAAGAAGGGCCTTCACACACAAAACCTGAT...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCGAACTGTTTAGAGCATaGATAGATGAAGACCAACTG +
Preference number: 2 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRELFRA*IDEDQL
Trigger: CAGTTGGTCTTCATCTATTCATGCTCTAAACAGTTC...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGATCTTCAACTGTGAAGTaGTGTCCACAAGTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRSSTVK*CPQVLA
Trigger: AGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGA...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACGCTGTCCACAAGTCTTaGCTCCGGATGTTACCAGGC +
Preference number: 2 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYAVHKS*LRMLPG
Trigger: GCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGC...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCTATGCTGGAATCACCTaGAGTACTGGTTGCTATTTA +
Preference number: 2 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRYAGIT*STGCYL
Trigger: TAAATAGCAACCAGTACTCCAGGTGATTCCAGCATA...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTGCAGAGGTGTGGATGTaGACTCCTAATGACACAAAC +
Preference number: 2 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHAAEVWM*TPNDTN
Trigger: GTTTGTGTCATTAGGAGTCCACATCCACACCTCTGC...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp CCTTCTCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCAGAAAGAGCAGAGGTGTaGATGTGGACTCCTAATGAC +
Preference number: 2 (lower is better)
Translates to: PSPFCRTPCTRAQFHIFAERAEV*MWTPND
Trigger: GTCATTAGGAGTCCACATCCACACCTCTGCTCTTTC...TGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp CCTTCTCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCAATCAGGTTTTGTGTGTaGAGGCCCTTCTTCAACTGT +
Preference number: 2 (lower is better)
Translates to: PSPFCRTPCTRAQFHIFAIRFCV*RPFFNC
Trigger: ACAGTTGAAGAAGGGCCTTCACACACAAAACCTGAT...TGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCACCATGGATAAGTTATaGTGGAATCACCTGGAGTAC +
Preference number: 2 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFTMDKL*WNHLEY
Trigger: GTACTCCAGGTGATTCCAGCATAACTTATCCATGGT...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCATTATGGTGACTTCATaGTCTATAATGTCTTCCCTA +
Preference number: 2 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPIIMVTS*SIMSSL
Trigger: TAGGGAAGACATTATAGAGCATGAAGTCACCATAAT...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGCTCGGAGATGTGAAATaGCTTGCTCAAGTTCATCCG +
Preference number: 2 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQLGDVK*LAQVHP
Trigger: CGGATGAACTTGAGCAAGTCATTTCACATCTCCGAG...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCATTATAAATGTGCCCTaGACTGTGTTCACAACAAAC +
Preference number: 2 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSIINVP*TVFTTN
Trigger: GTTTGTTGTGAACACAGTGCAGGGCACATTTATAAT...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACTTATTCACAGGAAGATaGGGTGCCAGTGAGCACCCT +
Preference number: 2 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYLFTGR*GASEHP
Trigger: AGGGTGCTCACTGGCACCCCATCTTCCTGTGAATAA...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACTTTGGTGTCTGCCCCTaGACAAGTCACTTCCTCCTT +
Preference number: 2 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYFGVCP*TSHFLL
Trigger: AAGGAGGAAGTGACTTGTCCAGGGGCAGACACCAAA...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGAATCAGATTCCCATTTaGTGTCTGCCCCTGGACAAG +
Preference number: 2 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQNQIPI*CLPLDK
Trigger: CTTGTCCAGGGGCAGACACCAAATGGGAATCTGATT...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACAGAGGCTCGGAGATGTaGAATGACTTGCTCAAGTTC +
Preference number: 2 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYRGSEM*NDLLKF
Trigger: GAACTTGAGCAAGTCATTTCACATCTCCGAGCCTCT...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR GCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAATTATGGTGACTTCATaGTCTATAATGTCTTCCCTA +
Preference number: 2 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRIMVTS*SIMSSL
Trigger: TAGGGAAGACATTATAGAGCATGAAGTCACCATAAT...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGATGGATAAGTTATGCTaGAATCACCTGGAGTACTGG +
Preference number: 2 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQMDKLC*NHLEYW
Trigger: CCAGTACTCCAGGTGATTCCAGCATAACTTATCCAT...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACTATGCTGGAATCACCTaGAGTACTGGTTGCTATTTA +
Preference number: 2 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYYAGIT*STGCYL
Trigger: TAAATAGCAACCAGTACTCCAGGTGATTCCAGCATA...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR TCA 90 bp TTGTTTACTTTGTTCTGTATCCAGGGAGAGATGCCTAAAAAGATAACACTTTTCGGCAGGAGCCTAATCTaGTGGGAACATCACAGTCCT +
Preference number: 2 (lower is better)
Translates to: LFTLFCIQGEMPKKITLFGRSLI*WEHHSP
Trigger: AGGACTGTGATGTTCCCATCAGATTAGGCTCCTGCC...GAAAAGTGTTATCTTTTTAGGCATCTCTCCCTGGATACAGAACAAAGTAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615557.1
3UTR-3UTR GCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACATTATAAATGTGCCCTaGACTGTGTTCACAACAAAC +
Preference number: 2 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYIINVP*TVFTTN
Trigger: GTTTGTTGTGAACACAGTGCAGGGCACATTTATAAT...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR TCA 72 bp GGTGCGGAGGCGCTGTTCCAGCCAGAGCTCAGTCAATaGATAGAAAGCGCTGGGGACAGAGCCTGGCCTGCA +
Preference number: 3 (lower is better)
Translates to: GAEALFQPELSQ*IESAGDRAWPA
Trigger: TGCAGGCCAGGCTCTGTCCCCAGCGCTTTCTATTCATTGACTGAGCTCTGGCTGGAACAGCGCCTCCGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523553.1
3UTR CCA 72 bp AATGCAATCGCTATCCCACACACCCTGGGAATGGGCTaGACTCCTGACCTTCCCCATCGCCCCCAGAGAGAG +
Preference number: 3 (lower is better)
Translates to: NAIAIPHTLGMG*TPDLPHRPQRE
Trigger: CTCTCTCTGGGGGCGATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CAA 90 bp CTCCTCGAGGCCCGGGCCTGGCAGTGTCTAGCGCACAGTCAGCGCTTAGGAACTTTGGGACGACTGAACTaGGTGACCTCTGAAGCCATT +
Preference number: 3 (lower is better)
Translates to: LLEARAWQCLAHSQRLGTLGRLN*VTSEAI
Trigger: AATGGCTTCAGAGGTCACCAAGTTCAGTCGTCCCAA...AGTTCCTAAGCGCTGACTGTGCGCTAGACACTGCCAGGCCCGGGCCTCGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CAA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGACAGGCCATTGGGCCCTaGGGACCCAGAAGGGGAGTG +
Preference number: 3 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRQAIGP*GPRRGV
Trigger: CACTCCCCTTCTGGGTCCCAAGGGCCCAATGGCCTG...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CAA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCCAGAGCGAGTGGGCATaGACCACCCAGTGCACTGAA +
Preference number: 3 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSQSEWA*TTQCTE
Trigger: TTCAGTGCACTGGGTGGTCAATGCCCACTCGCTCTG...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CAA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCGTCCTCATCTTACACTaGGAGAAACAGAGGCTCGGA +
Preference number: 3 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPIVLILH*EKQRLG
Trigger: TCCGAGCCTCTGTTTCTCCAAGTGTAAGATGAGGAC...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 72 bp AGGCTTCCTGGCTTCTGGCATTACCCTTCTCCAATATaGGCCCCACACAGCACCCAGCAAGACCCATCACTA +
Preference number: 3 (lower is better)
Translates to: RLPGFWHYPSPI*APHSTQQDPSL
Trigger: TAGTGATGGGTCTTGCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 72 bp TTAATAAGCACCCCACTTTGCACCTGTCCTGTTAGGTaGCCAGTGGGTGGCCCCTTCTCTCCATTCCCATGG +
Preference number: 3 (lower is better)
Translates to: LISTPLCTCPVR*PVGGPFSPFPW
Trigger: CCATGGGAATGGAGAGAAGGGGCCACCCACTGGGCACCTAACAGGACAGGTGCAAAGTGGGGTGCTTATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR CCA 72 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATaGACTCTCACGCCTCCCACAAGGTCCCACTCAAAT +
Preference number: 3 (lower is better)
Translates to: LSRNTLPLTPPS*TLTPPTRSHSN
Trigger: ATTTGAGTGGGACCTTGTGGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CAA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCTGCTGTCCACAAGTCTaGGCTCCGGATGTTACCAGG +
Preference number: 3 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFCCPQV*APDVTR
Trigger: CCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCA...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CAA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCCGGGGTTCCACTATTTaGGCCAGACTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSRGSTI*ARLVSN
Trigger: GTTTGAGACCAGTCTGGCCAAAATAGTGGAACCCCG...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 72 bp GAGTGGAAAGAAGGAATCTTAATAAGCACCCCACTTTaGACCTGTCCTGTTAGGTGCCCAGTGGGTGGCCCC +
Preference number: 3 (lower is better)
Translates to: EWKEGILISTPL*TCPVRCPVGGP
Trigger: GGGGCCACCCACTGGGCACCTAACAGGACAGGTGCAAAGTGGGGTGCTTATTAAGATTCCTTCTTTCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CAA 90 bp CCTTCTCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCATGCTGTCCACAAGTCTaGGCTCCGGATGTTACCAGG +
Preference number: 3 (lower is better)
Translates to: PSPFCRTPCTRAQFHIFACCPQV*APDVTR
Trigger: CCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCA...TGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR TCA 72 bp GGCTTTCCTTCAGGCTTCAGCTTTAGTGACCCCCAGTaGCATCTTAGCAGCCAGCTTCTCATGCTGCATCCA +
Preference number: 3 (lower is better)
Translates to: GFPSGFSFSDPQ*HLSSQLLMLHP
Trigger: TGGATGCAGCATGAGAAGCTGGCTGCTAAGATGTCACTGGGGGTCACTAAAGCTGAAGCCTGAAGGAAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 72 bp ACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATaGTGGTCCACTTTCCAGAAATACCCTCCCCCTCAC +
Preference number: 3 (lower is better)
Translates to: TLHPCSVPYFCT*WSTFQKYPPPH
Trigger: GTGAGGGGGAGGGTATTTCTGGAAAGTGGACCAGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 72 bp ACAGCCTTCTCCCTTCTGCAGAACACCCTGCACCCGTaGTCAGTTCCATATTTTTGCACATGCTGGTCCACT +
Preference number: 3 (lower is better)
Translates to: TAFSLLQNTLHP*SVPYFCTCWST
Trigger: AGTGGACCAGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAGAAGGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 72 bp GTTAGAACCTACCCCATCCAGTCTGACTCCCAAGCCTaGACTCAACTTCTAAACTCCAAGGCAGGGCATCAC +
Preference number: 3 (lower is better)
Translates to: VRTYPIQSDSQA*TQLLNSKAGHH
Trigger: GTGATGCCCTGCCTTGGAGTTTAGAAGTTGAGTGCAGGCTTGGGAGTCAGACTGGATGGGGTAGGTTCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 72 bp CACCCGCCCACCATGTCCTGGAGAATATCCAAGATGTaGGGCACCTTCACTCTTCATTTCTCCCACGTTAAC +
Preference number: 3 (lower is better)
Translates to: HPPTMSWRISKM*GTFTLHFSHVN
Trigger: GTTAACGTGGGAGAAATGAAGAGTGAAGGTGCCGCACATCTTGGATATTCTCCAGGACATGGTGGGCGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523553.1
3UTR-3UTR CAA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCGTCCTCATCTTACACTaGGAGAAACAGAGGCTCGGA +
Preference number: 3 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFVLILH*EKQRLG
Trigger: TCCGAGCCTCTGTTTCTCCAAGTGTAAGATGAGGAC...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CAA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCGACACCCGGCCCTGGTaGCTATTAATAATACAGATT +
Preference number: 3 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSDTRPW*LLIIQI
Trigger: AATCTGTATTATTAATAGCAACCAGGGCCGGGTGTC...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR TCA 72 bp GCATCACAGTCAGATGATTTCAGAGCGAGTGGGCATTaGCCACCCAGTGCACTGAAAAGAGACATCCACTGG +
Preference number: 3 (lower is better)
Translates to: ASQSDDFRASGH*PPSALKRDIHW
Trigger: CCAGTGGATGTCTCTTTTCAGTGCACTGGGTGGTCAATGCCCACTCGCTCTGAAATCATCTGACTGTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 72 bp GGTTTTGTGTGTGAAGGCCCTTCTTCAACTGTGAAGTaGTGTCCACAAGTCTTGGCTCCGGATGTTACCAGG +
Preference number: 3 (lower is better)
Translates to: GFVCEGPSSTVK*CPQVLAPDVTR
Trigger: CCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGAAGGGCCTTCACACACAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 72 bp CAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTaGACATGCTGGTCCACTTTCCAGAAATACCCTCCC +
Preference number: 3 (lower is better)
Translates to: QNTLHPCSVPYF*TCWSTFQKYPP
Trigger: GGGAGGGTATTTCTGGAAAGTGGACCAGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR TCA 72 bp TCAGGAAGCTTCCAGAATCCCATCTCACACCTAGGGTaGGGGACTCCTTCTTCTGCTCCACAACACTTTGTT +
Preference number: 3 (lower is better)
Translates to: SGSFQNPISHLG*GTPSSAPQHFV
Trigger: AACAAAGTGTTGTGGAGCAGAAGAAGGAGTCCCTCACCCTAGGTGTGAGATGGGATTCTGGAAGCTTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR CCA 72 bp GATTCCTCGACTCAGGAGACTCTGATGCTGCAAGTCTaGGACAGTCCAGTTGTCTGGATTTGGAACAACATC +
Preference number: 3 (lower is better)
Translates to: DSSTQETLMLQV*DSPVVWIWNNI
Trigger: GATGTTGTTCCAAATCCAGACAACTGGACTGTCCCAGACTTGCAGCATCAGAGTCTCCTGAGTCGAGGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CAA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCATTTGCAATCAGGTTTaGTGTGTGAAGGCCCTTCTT +
Preference number: 3 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFICNQV*CVKALL
Trigger: AAGAAGGGCCTTCACACACAAAACCTGATTGCAAAT...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CAA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAATTTGCAATCAGGTTTaGTGTGTGAAGGCCCTTCTT +
Preference number: 3 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRICNQV*CVKALL
Trigger: AAGAAGGGCCTTCACACACAAAACCTGATTGCAAAT...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CAA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGACTACTTTTCAGATTCTaGAATGGCTGGTCTTCAGCT +
Preference number: 3 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRLLFRF*NGWSSA
Trigger: AGCTGAAGACCAGCCATTCAAGAATCTGAAAAGTAG...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR TCA 72 bp TTACACTTGGAGAAACAGAGGCTCGGAGATGTGAAATaGCTTGCTCAAGTTCATCCGGCTAGCAGTGGCAGA +
Preference number: 3 (lower is better)
Translates to: LHLEKQRLGDVK*LAQVHPASSGR
Trigger: TCTGCCACTGCTAGCCGGATGAACTTGAGCAAGTCATTTCACATCTCCGAGCCTCTGTTTCTCCAAGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CAA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTCATCCCCAGGTAATTTaGAAACACACCCATGTTTTG +
Preference number: 3 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHAHPQVI*KHTHVL
Trigger: CAAAACATGGGTGTGTTTCAAAATTACCTGGGGATG...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR TCA 72 bp ATTTCAGAGCGAGTGGGCATTGACCACCCAGTGCACTaGAAAGAGACATCCACTGGAATCAGATTCCCATTT +
Preference number: 3 (lower is better)
Translates to: ISERVGIDHPVH*KETSTGIRFPF
Trigger: AAATGGGAATCTGATTCCAGTGGATGTCTCTTTTCAGTGCACTGGGTGGTCAATGCCCACTCGCTCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR TCA 72 bp TCATCTTACACTTGGAGAAACAGAGGCTCGGAGATGTaGAATGACTTGCTCAAGTTCATCCGGCTAGCAGTG +
Preference number: 3 (lower is better)
Translates to: SSYTWRNRGSEM*NDLLKFIRLAV
Trigger: CACTGCTAGCCGGATGAACTTGAGCAAGTCATTTCACATCTCCGAGCCTCTGTTTCTCCAAGTGTAAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 72 bp TCCCATCTCACACCTAGGGTGAGGGACTCCTTCTTCTaGTCCACAACACTTTGTTCCTCAATTGTCAATAAG +
Preference number: 3 (lower is better)
Translates to: SHLTPRVRDSFF*STTLCSSIVNK
Trigger: CTTATTGACAATTGAGGAACAAAGTGTTGTGGAGCAGAAGAAGGAGTCCCTCACCCTAGGTGTGAGATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR-3UTR CAA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACGACACCCGGCCCTGGTaGCTATTAATAATACAGATT +
Preference number: 3 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYDTRPW*LLIIQI
Trigger: AATCTGTATTATTAATAGCAACCAGGGCCGGGTGTC...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR TCA 72 bp CTATTAATAATACAGATTCCTCGACTCAGGAGACTCTaGTGCTGCAAGTCTGGGACAGTCCAGTTGTCTGGA +
Preference number: 3 (lower is better)
Translates to: LLIIQIPRLRRL*CCKSGTVQLSG
Trigger: TCCAGACAACTGGACTGTCCCAGACTTGCAGCATCAGAGTCTCCTGAGTCGAGGAATCTGTATTATTAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 72 bp TGTGGACTCCTAATGACACAAACCATGGATAAGTTATaGTGGAATCACCTGGAGTACTGGTTGCTATTTATT +
Preference number: 3 (lower is better)
Translates to: CGLLMTQTMDKL*WNHLEYWLLFI
Trigger: AATAAATAGCAACCAGTACTCCAGGTGATTCCAGCATAACTTATCCATGGTTTGTGTCATTAGGAGTCCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR GCA 72 bp AATAAGCATGCTTTAGGGAAAATTATGGTGACTTCATaGTCTATAATGTCTTCCCTACTGTCTTTTCCTCCT +
Preference number: 3 (lower is better)
Translates to: NKHALGKIMVTS*SIMSSLLSFPP
Trigger: AGGAGGAAAAGACAGTAGGGAAGACATTATAGAGCATGAAGTCACCATAATTTTCCCTAAAGCATGCTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCGGCTCCGCATAGCCTaGCGCCAGGGCGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRRLRIA*RQGAGA
Trigger: AGCCCCAGCGCCCTGGCGCCAGGCTATGCGGAGCCG...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CTCCTCGAGGCCCGGGCCTGGCAGTGTCTAGCGCACAGTCAGCGCTTAGGAACTGGTAGTCGTTGGGGCTaGGGGTGTGACTTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: LLEARAWQCLAHSQRLGTGSRWG*GCDFGH
Trigger: ATGGCCGAAGTCACACCCCCAGCCCCAACGACTACC...AGTTCCTAAGCGCTGACTGTGCGCTAGACACTGCCAGGCCCGGGCCTCGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp CACCCGCCCACCATGTCCTGGAGAATATCCAAGATGTGCGGCACCTTCACTCTTCTCCCGCTGTGGCTGTaGCTGGCTTCCCGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: HPPTMSWRISKMCGTFTLLPLWL*LASRPS
Trigger: GGAGGGGCGGGAAGCCAGTCACAGCCACAGCGGGAG...AAGAGTGAAGGTGCCGCACATCTTGGATATTCTCCAGGACATGGTGGGCGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR CCA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCGCCCCTCAGGGCCATTaGCATTGGCAACCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPIAPQGH*HWQPSP
Trigger: CGGGGACGGTTGCCAATGCCAATGGCCCTGAGGGGC...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp AAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCCCCGAGACTGGGGCAGGCTGGGGTGCAGTaGCGCAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KCCPQVLAPDVTRPPRLGQAGVQ*RNLGSL
Trigger: CAGTGAGCCGAGATTGCGCCACTGCACCCCAGCCTG...CCCCAGTCTCGGGGGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCTTGGGGCTGGGGGTGTaGCTTCGGCCATCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FLASGITLLQYAPHTAPSLGLGV*LRPSLW
Trigger: CCAGAGCGATGGCCGAAGTCACACCCCCAGCCCCAA...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp AAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCCCCGAGACTGGGGCATGGCAGCCATCACTaGCCCCTTCTGCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: KCCPQVLAPDVTRPPRLGHGSHH*PLLLLG
Trigger: CCCAAGGAGCAGAAGGGGCCAGTGATGGCTGCCATG...CCCCAGTCTCGGGGGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTCGGCTCCGCATAGCCTaGCGCCAGGGCGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHARLRIA*RQGAGA
Trigger: AGCCCCAGCGCCCTGGCGCCAGGCTATGCGGAGCCG...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp AAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCCCCGAGACTGGGGGTGGTTGAACTTCTCTaGCGGGACGCCCTTCAGCGG +
Preference number: 4 (lower is better)
Translates to: KCCPQVLAPDVTRPPRLGVVELL*RDALQR
Trigger: CCGCTGAAGGGCGTCCCGCCAGAGAAGTTCAACCAC...CCCCAGTCTCGGGGGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCGAGGCCCGGGCCTaGCAGTGTCTAGCGCACAGT +
Preference number: 4 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRLEARA*QCLAHS
Trigger: ACTGTGCGCTAGACACTGCCAGGCCCGGGCCTCGAG...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CTCCTCGAGGCCCGGGCCTGGCAGTGTCTAGCGCACAGTCAGCGCTTAGGAACTCCCTGCAGCCAGCTCTaGCTTCAGCTGATGAGAATC +
Preference number: 4 (lower is better)
Translates to: LLEARAWQCLAHSQRLGTPCSQL*LQLMRI
Trigger: GATTCTCATCAGCTGAAGCCAGAGCTGGCTGCAGGG...AGTTCCTAAGCGCTGACTGTGCGCTAGACACTGCCAGGCCCGGGCCTCGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517768.6
CDS-3UTR TCA 90 bp CTCCTCGAGGCCCGGGCCTGGCAGTGTCTAGCGCACAGTCAGCGCTTAGGAACTCTGCTAACTCGAAAGTaGACTTCTGCACACGGCGCT +
Preference number: 4 (lower is better)
Translates to: LLEARAWQCLAHSQRLGTLLTRK*TSAHGA
Trigger: AGCGCCGTGTGCAGAAGTTCACTTTCGAGTTAGCAG...AGTTCCTAAGCGCTGACTGTGCGCTAGACACTGCCAGGCCCGGGCCTCGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCGGTAGTCCCGGTAGCTaGCGAACTCCTGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: FLASGITLLQYAPHTAPSGSPGS*RTPAKG
Trigger: GCCCTTGGCAGGAGTTCGTCAGCTACCGGGACTACC...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp AGTGAGCACCCTGTCACCGGGGGAGTGTACACTACAGGAACAGGAAAGAGCAGAAAGATGGGGTGCCAGTaGGCACCCTGTCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: SEHPVTGGVYTTGTGKSRKMGCQ*APCHRG
Trigger: CCCCCGGTGACAGGGTGCTCACTGGCACCCCATCTT...TCTGCTCTTTCCTGTTCCTGTAGTGTACACTCCCCCGGTGACAGGGTGCTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp CTCCTCGAGGCCCGGGCCTGGCAGTGTCTAGCGCACAGTCAGCGCTTAGGAACTGACCACCCAGTGCACTaGAAAGAGACATCCACTGGA +
Preference number: 4 (lower is better)
Translates to: LLEARAWQCLAHSQRLGTDHPVH*KETSTG
Trigger: TCCAGTGGATGTCTCTTTTCAGTGCACTGGGTGGTC...AGTTCCTAAGCGCTGACTGTGCGCTAGACACTGCCAGGCCCGGGCCTCGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp CTCCTCGAGGCCCGGGCCTGGCAGTGTCTAGCGCACAGTCAGCGCTTAGGAACTGGCATCACAGTCAGATaGTTTCAGAGCGAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLEARAWQCLAHSQRLGTGITVR*FQSEWA
Trigger: TGCCCACTCGCTCTGAAATCATCTGACTGTGATGCC...AGTTCCTAAGCGCTGACTGTGCGCTAGACACTGCCAGGCCCGGGCCTCGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCCTCTGTCGGGAAGCTaGGAGTTGCGTGGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRPLSGS*ELRGVP
Trigger: AGGGACGCCACGCAACTCTCAGCTTCCCGACAGAGG...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000517768.6
CDS-3UTR GCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCGAGCAGGGTGTCCCCTaGAGCCAGCTCTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSREQGVP*SQLWLQ
Trigger: CTGAAGCCAGAGCTGGCTGCAGGGGACACCCTGCTC...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000517768.6
CDS-3UTR GCA 90 bp AAACTCATAGCACCCGCCCACCATGTCCTGGAGAATATCCAAGATGTGCGGCACGTCTGTCCCCCGGGCTaGCCGCCCCGCCTTACTTGT +
Preference number: 4 (lower is better)
Translates to: KLIAPAHHVLENIQDVRHVCPPG*PPRLTC
Trigger: ACAAGTAAGGCGGGGCGGGCAGCCCGGGGGACAGAC...GTGCCGCACATCTTGGATATTCTCCAGGACATGGTGGGCGGGTGCTATGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR CCA 90 bp AAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCCCCGAGACTGGGGGTCCAGCGTAGGGACTaGTTCAGTGAGGTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: KCCPQVLAPDVTRPPRLGVQRRD*FSEVPH
Trigger: ATGGGGGACCTCACTGAACCAGTCCCTACGCTGGAC...CCCCAGTCTCGGGGGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCCAGGGCCATTGGCATTaGCAACCGTCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: FLASGITLLQYAPHTAPSQGHWH*QPSPTP
Trigger: CGGAGTCGGGGACGGTTGCCAATGCCAATGGCCCTG...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCGATGAAGGGGGTGCCTaGCCTGGGAAAAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRDEGGA*PGKSAP
Trigger: GGGGGCACTTTTCCCAGGCCAGGCACCCCCTTCATC...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCAGCTCCTCGGACTCTaGGAGGTTACGGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRQLLGL*EVTDPA
Trigger: GGCTGGGTCCGTAACCTCCCAGAGTCCGAGGAGCTG...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR CAA 72 bp GGCCCTTCTTCAACTGTGAAGTGCTGTCCACAAGTCTaGGCTCCGGATGTTACCAGGCCCCCGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: GPSSTVKCCPQV*APDVTRPPRLG
Trigger: CCCCAGTCTCGGGGGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGAAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp AGTGAGCACCCTGTCACCGGGGGAGTGTACACTACAGGAACAGGAAAGAGCAGAGGTAGTCCCGGTAGCTaGCGAACTCCTGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: SEHPVTGGVYTTGTGKSRGSPGS*RTPAKG
Trigger: GCCCTTGGCAGGAGTTCGTCAGCTACCGGGACTACC...TCTGCTCTTTCCTGTTCCTGTAGTGTACACTCCCCCGGTGACAGGGTGCTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGATTGGGGCTGGGGGTGTaGCTTCGGCCATCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRLGLGV*LRPSLW
Trigger: CCAGAGCGATGGCCGAAGTCACACCCCCAGCCCCAA...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCTTGTCCAGGCTGGGGTaGAGTGGCGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: FLASGITLLQYAPHTAPSLSRLG*SGAISA
Trigger: AGCCGAGATTGCGCCACTGCACCCCAGCCTGGACAA...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp AGTGAGCACCCTGTCACCGGGGGAGTGTACACTACAGGAACAGGAAAGAGCAGAGTGAAGCCCACCCCATaGTGGCCCTCACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SEHPVTGGVYTTGTGKSRVKPTP*WPSLAP
Trigger: AGGAGCCAGTGAGGGCCAGCATGGGGTGGGCTTCAC...TCTGCTCTTTCCTGTTCCTGTAGTGTACACTCCCCCGGTGACAGGGTGCTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCCGGCGCTGCCTCTTCTaGAAGAGGAGGGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSRRCLF*KRRDPL
Trigger: CAGAGGGTCCCTCCTCTTCCAGAAGAGGCAGCGCCG...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCCAGTCACCTTCCTCCTaGCGCTTCCGGCCAGCATCG +
Preference number: 4 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSQSPSS*RFRPAS
Trigger: CGATGCTGGCCGGAAGCGCCAGGAGGAAGGTGACTG...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TATCCAAGATGTGCGGCACCTTCACTCTTCATTTCTCCCACGTTAACTGAGCACCGGCTCCGCATAGCCTaGCGCCAGGGCGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: YPRCAAPSLFISPTLTEHRLRIA*RQGAGA
Trigger: AGCCCCAGCGCCCTGGCGCCAGGCTATGCGGAGCCG...GTGCTCAGTTAACGTGGGAGAAATGAAGAGTGAAGGTGCCGCACATCTTGGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR CCA 90 bp AGTGAGCACCCTGTCACCGGGGGAGTGTACACTACAGGAACAGGAAAGAGCAGAGATGAAGGGGGTGCCTaGCCTGGGAAAAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SEHPVTGGVYTTGTGKSRDEGGA*PGKSAP
Trigger: GGGGGCACTTTTCCCAGGCCAGGCACCCCCTTCATC...TCTGCTCTTTCCTGTTCCTGTAGTGTACACTCCCCCGGTGACAGGGTGCTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCTTACGGACCCAGCCCTaGGCCACTCTGTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPILRTQP*ATLLKL
Trigger: CAGCTTCAACAGAGTGGCCCAGGGCTGGGTCCGTAA...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCAGATGGCGGTGTGGTTaGACTTCTCTGGCGGGACGC +
Preference number: 4 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSRWRCG*TSLAGR
Trigger: GCGTCCCGCCAGAGAAGTTCAACCACACCGCCATCT...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp AAACTCATAGCACCCGCCCACCATGTCCTGGAGAATATCCAAGATGTGCGGCACGGTAGTCCCGGTAGCTaGCGAACTCCTGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: KLIAPAHHVLENIQDVRHGSPGS*RTPAKG
Trigger: GCCCTTGGCAGGAGTTCGTCAGCTACCGGGACTACC...GTGCCGCACATCTTGGATATTCTCCAGGACATGGTGGGCGGGTGCTATGAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR TCA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTAAGATGGGGTGCCAGTaGGCACCCTGTCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHAKMGCQ*APCHRG
Trigger: CCCCCGGTGACAGGGTGCTCACTGGCACCCCATCTT...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCAGAGCGAGTGGGCATTaGCCACCCAGTGCACTGAAA +
Preference number: 4 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPIRASGH*PPSALK
Trigger: TTTCAGTGCACTGGGTGGTCAATGCCCACTCGCTCT...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCTTCTGCACACGGCGCTaGCTCTTCTGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FLASGITLLQYAPHTAPSFCTRR*LFWKRR
Trigger: CCTCCTCTTCCAGAAGAGGCAGCGCCGTGTGCAGAA...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCGTGAAGCCCACCCCATaGTGGCCCTCACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFVKPTP*WPSLAP
Trigger: AGGAGCCAGTGAGGGCCAGCATGGGGTGGGCTTCAC...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp CTCCTCGAGGCCCGGGCCTGGCAGTGTCTAGCGCACAGTCAGCGCTTAGGAACTTTCATACCTGGTGGCTaGAGTTACTTTCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LLEARAWQCLAHSQRLGTFIPGG*SYFPEH
Trigger: GTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAA...AGTTCCTAAGCGCTGACTGTGCGCTAGACACTGCCAGGCCCGGGCCTCGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp GAAAGGCAGGAGCCTAATCTGATGGGAACATCACAGTCCTCAGCCTGGCTTACCGTCCAGCGTAGGGACTaGCAGGAAAGGCCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: ERQEPNLMGTSQSSAWLTVQRRD*QERPER
Trigger: CCGCTCTGGCCTTTCCTGGCAGTCCCTACGCTGGAC...GGTAAGCCAGGCTGAGGACTGTGATGTTCCCATCAGATTAGGCTCCTGCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR CCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCGTCCAGCGTAGGGACTaGTTCAGTGAGGTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: FLASGITLLQYAPHTAPSVQRRD*FSEVPH
Trigger: ATGGGGGACCTCACTGAACCAGTCCCTACGCTGGAC...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGACGGCGCTGCCTCTTCTaGAAGAGGAGGGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRRRCLF*KRRDPL
Trigger: CAGAGGGTCCCTCCTCTTCCAGAAGAGGCAGCGCCG...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCAGTCACCTTCCTCCTaGCGCTTCCGGCCAGCATCG +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFQSPSS*RFRPAS
Trigger: CGATGCTGGCCGGAAGCGCCAGGAGGAAGGTGACTG...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCTTGGAGATGGCGGTGTaGTTGAACTTCTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPILEMAV*LNFSGG
Trigger: CCCGCCAGAGAAGTTCAACCACACCGCCATCTCCAA...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGACAGCTCCTCGGACTCTaGGAGGTTACGGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRQLLGL*EVTDPA
Trigger: GGCTGGGTCCGTAACCTCCCAGAGTCCGAGGAGCTG...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp AGTGAGCACCCTGTCACCGGGGGAGTGTACACTACAGGAACAGGAAAGAGCAGACCAGGCCCCCGAGACTaGGGAACTGAAGATTCAGGC +
Preference number: 4 (lower is better)
Translates to: SEHPVTGGVYTTGTGKSRPGPRD*GTEDSG
Trigger: GCCTGAATCTTCAGTTCCCCAGTCTCGGGGGCCTGG...TCTGCTCTTTCCTGTTCCTGTAGTGTACACTCCCCCGGTGACAGGGTGCTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CTCCTCGAGGCCCGGGCCTGGCAGTGTCTAGCGCACAGTCAGCGCTTAGGAACTCTATTTTGGCCAGACTaGTCTCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LLEARAWQCLAHSQRLGTLFWPD*SQTPDL
Trigger: GAGGTCAGGAGTTTGAGACCAGTCTGGCCAAAATAG...AGTTCCTAAGCGCTGACTGTGCGCTAGACACTGCCAGGCCCGGGCCTCGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTGTTAGGTGCCCAGTaGGTGGCCCCTTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRLLGAQ*VAPSLH
Trigger: ATGGAGAGAAGGGGCCACCCACTGGGCACCTAACAG...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp TGTCCTGGAGAATATCCAAGATGTGCGGCACCTTCACTCTTCATTTCTCCCACGTTGGGGCTGGGGGTGTaGCTTCGGCCATCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: CPGEYPRCAAPSLFISPTLGLGV*LRPSLW
Trigger: CCAGAGCGATGGCCGAAGTCACACCCCCAGCCCCAA...CGTGGGAGAAATGAAGAGTGAAGGTGCCGCACATCTTGGATATTCTCCAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR TCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCCCGAGACTGGGGAACTaGAGATTCAGGCTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: FLASGITLLQYAPHTAPSPRLGN*RFRLGL
Trigger: TAGCCCTAGCCTGAATCTTCAGTTCCCCAGTCTCGG...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCCCATCTCACACCTAGGGTaGGGGACTCCTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSRNTLPLTPPSWTLTPPISHLG*GTPSSA
Trigger: AGCAGAAGAAGGAGTCCCTCACCCTAGGTGTGAGAT...GGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCAGAGCGAGTGGGCATTaGCCACCCAGTGCACTGAAA +
Preference number: 4 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRRASGH*PPSALK
Trigger: TTTCAGTGCACTGGGTGGTCAATGCCCACTCGCTCT...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCATCACTGGCCCCTTCTaGTCCTTGGGGATCATCCTG +
Preference number: 4 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRITGPF*SLGIIL
Trigger: CAGGATGATCCCCAAGGAGCAGAAGGGGCCAGTGAT...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp AGTGAGCACCCTGTCACCGGGGGAGTGTACACTACAGGAACAGGAAAGAGCAGATTCTGCACACGGCGCTaGCTCTTCTGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SEHPVTGGVYTTGTGKSRFCTRR*LFWKRR
Trigger: CCTCCTCTTCCAGAAGAGGCAGCGCCGTGTGCAGAA...TCTGCTCTTTCCTGTTCCTGTAGTGTACACTCCCCCGGTGACAGGGTGCTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCACCTGTCCTGTTAGGTaGCCAGTGGGTGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFTCPVR*PVGGPF
Trigger: GAAGGGGCCACCCACTGGGCACCTAACAGGACAGGT...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp AAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCCCCGAGACTGGGGATAAGCACCCCACTTTaGACCTGTCCTGTTAGGTGC +
Preference number: 4 (lower is better)
Translates to: KCCPQVLAPDVTRPPRLGISTPL*TCPVRC
Trigger: GCACCTAACAGGACAGGTGCAAAGTGGGGTGCTTAT...CCCCAGTCTCGGGGGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TCTCACGCCTCCCACAAGGTCCCACTCAAATCCTTCAGGAAGCTTCCAGAATCCGTGGTTGAACTTCTCTaGCGGGACGCCCTTCAGCGG +
Preference number: 4 (lower is better)
Translates to: SHASHKVPLKSFRKLPESVVELL*RDALQR
Trigger: CCGCTGAAGGGCGTCCCGCCAGAGAAGTTCAACCAC...GGATTCTGGAAGCTTCCTGAAGGATTTGAGTGGGACCTTGTGGGAGGCGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp AGTGAGCACCCTGTCACCGGGGGAGTGTACACTACAGGAACAGGAAAGAGCAGACTGTTAGGTGCCCAGTaGGTGGCCCCTTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SEHPVTGGVYTTGTGKSRLLGAQ*VAPSLH
Trigger: ATGGAGAGAAGGGGCCACCCACTGGGCACCTAACAG...TCTGCTCTTTCCTGTTCCTGTAGTGTACACTCCCCCGGTGACAGGGTGCTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCCACACACCCTGGGAATaGGCTGGACTCCTGACCTTC +
Preference number: 4 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSHTPWE*AGLLTF
Trigger: GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTG...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCTTGTTTTGGGTGCAGTaGTCTCCCCACCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRLFWVQ*SPHQAP
Trigger: AGGAGCCTGGTGGGGAGACCACTGCACCCAAAACAA...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCTCATCCTGGAAATGTTaGGGGTCAGCTGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: FLASGITLLQYAPHTAPSSSWKC*GSAAGS
Trigger: GCTACCAGCAGCTGACCCTCAACATTTCCAGGATGA...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297130.4
CDS-3UTR TCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCATCTCACACCTAGGGTaGGGGACTCCTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRISHLG*GTPSSA
Trigger: AGCAGAAGAAGGAGTCCCTCACCCTAGGTGTGAGAT...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp TCTCACGCCTCCCACAAGGTCCCACTCAAATCCTTCAGGAAGCTTCCAGAATCCCTACCCCATCCAGTCTaGCTCCCAAGCCTGCACTCA +
Preference number: 4 (lower is better)
Translates to: SHASHKVPLKSFRKLPESLPHPV*LPSLHS
Trigger: TGAGTGCAGGCTTGGGAGTCAGACTGGATGGGGTAG...GGATTCTGGAAGCTTCCTGAAGGATTTGAGTGGGACCTTGTGGGAGGCGTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCCCAGAGCTCTACAGCAATaGGAGGCTTTCCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LSRNTLPLTPPSWTLTPPRALQQ*EAFLQA
Trigger: AGCCTGAAGGAAAGCCTCTCATTGCTGTAGAGCTCT...GGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp GGCGCTGTTCCAGCCAGAGCTCAGTCAATGAATAGAAAGCGCTGGGGACAGAGCCCAGAGCTCAGTCAATaGATAGAAAGCGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GAVPARAQSMNRKRWGQSPELSQ*IESAGD
Trigger: GTCCCCAGCGCTTTCTATTCATTGACTGAGCTCTGG...GCTCTGTCCCCAGCGCTTTCTATTCATTGACTGAGCTCTGGCTGGAACAGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR GCA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTTTGTCCAGGCTGGGGTaGAGTGGCGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHALSRLG*SGAISA
Trigger: AGCCGAGATTGCGCCACTGCACCCCAGCCTGGACAA...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp AAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCCCCGAGACTGGGGGCATTGACCACCCAGTaGACTGAAAAGAGACATCCA +
Preference number: 4 (lower is better)
Translates to: KCCPQVLAPDVTRPPRLGALTTQ*TEKRHP
Trigger: TGGATGTCTCTTTTCAGTGCACTGGGTGGTCAATGC...CCCCAGTCTCGGGGGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCAGGATTTGTTTTGGGTaGAGTGGTCTCCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRRICFG*SGLPTR
Trigger: CCTGGTGGGGAGACCACTGCACCCAAAACAAATCCT...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp CCGCCCACCATGTCCTGGAGAATATCCAAGATGTGCGGCACCTTCACTCTTCATCTGGCCTGCAGAAAGTaGTCAGGAAACGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PPTMSWRISKMCGTFTLHLACRK*SGNAGS
Trigger: GGAGCCTGCGTTTCCTGAGCACTTTCTGCAGGCCAG...ATGAAGAGTGAAGGTGCCGCACATCTTGGATATTCTCCAGGACATGGTGGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR CCA 90 bp CCTTCTCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCAGCCAGCATCGCCCGCTaGCTGGCTGCTAACTCGAAA +
Preference number: 4 (lower is better)
Translates to: PSPFCRTPCTRAQFHIFAASIAR*LAANSK
Trigger: TTTCGAGTTAGCAGCCAGCCAGCGGGCGATGCTGGC...TGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCCGCCCACCATGTCCTGGAGAATATCCAAGATGTGCGGCACCTTCACTCTTCATTGGAGATGGCGGTGTaGTTGAACTTCTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: PAHHVLENIQDVRHLHSSLEMAV*LNFSGG
Trigger: CCCGCCAGAGAAGTTCAACCACACCGCCATCTCCAA...TGAAGAGTGAAGGTGCCGCACATCTTGGATATTCTCCAGGACATGGTGGGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR CCA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTGGTAGTCGTTGGGGCTaGGGGTGTGACTTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHAGSRWG*GCDFGH
Trigger: ATGGCCGAAGTCACACCCCCAGCCCCAACGACTACC...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CGCCCACCATGTCCTGGAGAATATCCAAGATGTGCGGCACCTTCACTCTTCATTGGTAGTCGTTGGGGCTaGGGGTGTGACTTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: RPPCPGEYPRCAAPSLFIGSRWG*GCDFGH
Trigger: ATGGCCGAAGTCACACCCCCAGCCCCAACGACTACC...AATGAAGAGTGAAGGTGCCGCACATCTTGGATATTCTCCAGGACATGGTGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR CCA 90 bp AAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCCCCGAGACTGGGGGACAGTCCAGTTGTCTaGATTTGGAACAACATCCCC +
Preference number: 4 (lower is better)
Translates to: KCCPQVLAPDVTRPPRLGDSPVV*IWNNIP
Trigger: GGGGATGTTGTTCCAAATCCAGACAACTGGACTGTC...CCCCAGTCTCGGGGGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGACTCTGTTGTCCAGGCTaGGGTGCAGTGGCGCAATCT +
Preference number: 4 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRLCCPG*GAVAQS
Trigger: AGATTGCGCCACTGCACCCCAGCCTGGACAACAGAG...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCTCTGTTGTCCAGGCTaGGGTGCAGTGGCGCAATCT +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFLCCPG*GAVAQS
Trigger: AGATTGCGCCACTGCACCCCAGCCTGGACAACAGAG...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TCTCACGCCTCCCACAAGGTCCCACTCAAATCCTTCAGGAAGCTTCCAGAATCCCTCACACCCCCTTCATaGACTCTCACGCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: SHASHKVPLKSFRKLPESLTPPS*TLTPPT
Trigger: TGTGGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAG...GGATTCTGGAAGCTTCCTGAAGGATTTGAGTGGGACCTTGTGGGAGGCGTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAACCCTGGGAATGGGCTaGACTCCTGACCTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRTLGMG*TPDLPH
Trigger: ATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGT...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCACACACCCTGGGAATaGGCTGGACTCCTGACCTTC +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFHTPWE*AGLLTF
Trigger: GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTG...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCTATCCCACACACCCTaGGAATGGGCTGGACTCCTG +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFLSHTP*EWAGLL
Trigger: CAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAG...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp AGTGAGCACCCTGTCACCGGGGGAGTGTACACTACAGGAACAGGAAAGAGCAGAAAGCTGAGAGTTGCGTaGCGTCCCTGTAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SEHPVTGGVYTTGTGKSRKLRVA*RPCRQS
Trigger: TGACTGCCTACAGGGACGCCACGCAACTCTCAGCTT...TCTGCTCTTTCCTGTTCCTGTAGTGTACACTCCCCCGGTGACAGGGTGCTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517768.6
CDS-3UTR TCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCGCACCGGGGTCTTGTTaGAATTTCGGTAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSAPGSC*NFGSRW
Trigger: CCAACGACTACCGAAATTTCAACAAGACCCCGGTGC...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCGACCACCCAGTGCACTaGAAAGAGACATCCACTGGA +
Preference number: 4 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSDHPVH*KETSTG
Trigger: TCCAGTGGATGTCTCTTTTCAGTGCACTGGGTGGTC...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCGGCATCACAGTCAGATaGTTTCAGAGCGAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSGITVR*FQSEWA
Trigger: TGCCCACTCGCTCTGAAATCATCTGACTGTGATGCC...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTCTACCCCATCCAGTCTaGCTCCCAAGCCTGCACTCA +
Preference number: 4 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHALPHPV*LPSLHS
Trigger: TGAGTGCAGGCTTGGGAGTCAGACTGGATGGGGTAG...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCTTTAGTGACCCCCAGTaGCATCTTAGCAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: FLASGITLLQYAPHTAPSFSDPQ*HLSSQL
Trigger: AAGCTGGCTGCTAAGATGTCACTGGGGGTCACTAAA...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp AGTGAGCACCCTGTCACCGGGGGAGTGTACACTACAGGAACAGGAAAGAGCAGAACAGCAGAACCAACCTaGGGCAACTGGAGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SEHPVTGGVYTTGTGKSRTAEPT*GNWSPL
Trigger: AAGAGGACTCCAGTTGCCTCAGGTTGGTTCTGCTGT...TCTGCTCTTTCCTGTTCCTGTAGTGTACACTCCCCCGGTGACAGGGTGCTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp GGCGCTGTTCCAGCCAGAGCTCAGTCAATGAATAGAAAGCGCTGGGGACAGAGCCCCCGCCTTACTTGTTaGAATTTCGGTAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: GAVPARAQSMNRKRWGQSPRLTC*NFGSRW
Trigger: CCAACGACTACCGAAATTTCAACAAGTAAGGCGGGG...GCTCTGTCCCCAGCGCTTTCTATTCATTGACTGAGCTCTGGCTGGAACAGCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR GCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAATCACTGGCCCCTTCTaGTCCTTGGGGATCATCCTG +
Preference number: 4 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRITGPF*SLGIIL
Trigger: CAGGATGATCCCCAAGGAGCAGAAGGGGCCAGTGAT...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp CTCCTCGAGGCCCGGGCCTGGCAGTGTCTAGCGCACAGTCAGCGCTTAGGAACTCCATATTTTTGCACATaGTGGTCCACTTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LLEARAWQCLAHSQRLGTPYFCT*WSTFQK
Trigger: TTTCTGGAAAGTGGACCAGCATGTGCAAAAATATGG...AGTTCCTAAGCGCTGACTGTGCGCTAGACACTGCCAGGCCCGGGCCTCGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp TCTCACGCCTCCCACAAGGTCCCACTCAAATCCTTCAGGAAGCTTCCAGAATCCTACCCTTCTCCAATATaGGCCCCACACAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: SHASHKVPLKSFRKLPESYPSPI*APHSTQ
Trigger: CTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTA...GGATTCTGGAAGCTTCCTGAAGGATTTGAGTGGGACCTTGTGGGAGGCGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACGCCCCTCAGGGCCATTaGCATTGGCAACCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYAPQGH*HWQPSP
Trigger: CGGGGACGGTTGCCAATGCCAATGGCCCTGAGGGGC...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TGTCCTGGAGAATATCCAAGATGTGCGGCACCTTCACTCTTCATTTCTCCCACGGTGGTTGAACTTCTCTaGCGGGACGCCCTTCAGCGG +
Preference number: 4 (lower is better)
Translates to: CPGEYPRCAAPSLFISPTVVELL*RDALQR
Trigger: CCGCTGAAGGGCGTCCCGCCAGAGAAGTTCAACCAC...CGTGGGAGAAATGAAGAGTGAAGGTGCCGCACATCTTGGATATTCTCCAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR CCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGAGGGGTCCTCCAAATaGCACCGGGGTCTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSREGSSK*HRGLVE
Trigger: TTCAACAAGACCCCGGTGCCATTTGGAGGACCCCTC...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTTTACGGACCCAGCCCTaGGCCACTCTGTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHALRTQP*ATLLKL
Trigger: CAGCTTCAACAGAGTGGCCCAGGGCTGGGTCCGTAA...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCTGTCCACAAGTCTTaGCTCCGGATGTTACCAGGC +
Preference number: 4 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRAVHKS*LRMLPG
Trigger: GCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGC...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCCCGGGGTTCCACTATTTTaGCCAGACTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LSRNTLPLTPPSWTLTPPGVPLF*PDWSQT
Trigger: AGTTTGAGACCAGTCTGGCCAAAATAGTGGAACCCC...GGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCCCGCAGAGGTGTGGATGTaGACTCCTAATGACACAAAC +
Preference number: 4 (lower is better)
Translates to: LSRNTLPLTPPSWTLTPPAEVWM*TPNDTN
Trigger: GTTTGTGTCATTAGGAGTCCACATCCACACCTCTGC...GGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCTTATTCACAGGAAGATaGGGTGCCAGTGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: FLASGITLLQYAPHTAPSLFTGR*GASEHP
Trigger: AGGGTGCTCACTGGCACCCCATCTTCCTGTGAATAA...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACCTCGAGGCCCGGGCCTaGCAGTGTCTAGCGCACAGT +
Preference number: 4 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYLEARA*QCLAHS
Trigger: ACTGTGCGCTAGACACTGCCAGGCCCGGGCCTCGAG...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCCCAATCAGATTCCCATTTaGTGTCTGCCCCTGGACAAG +
Preference number: 4 (lower is better)
Translates to: LSRNTLPLTPPSWTLTPPNQIPI*CLPLDK
Trigger: CTTGTCCAGGGGCAGACACCAAATGGGAATCTGATT...GGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCTTCTCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCAACCCTGGGAATGGGCTaGACTCCTGACCTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PSPFCRTPCTRAQFHIFATLGMG*TPDLPH
Trigger: ATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGT...TGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCTTCTCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACTATCCCACACACCCTaGGAATGGGCTGGACTCCTG +
Preference number: 4 (lower is better)
Translates to: PSPFCRTPCTRAQFHIFALSHTP*EWAGLL
Trigger: CAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAG...TGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TCTCACGCCTCCCACAAGGTCCCACTCAAATCCTTCAGGAAGCTTCCAGAATCCTTGTTTTGGGTGCAGTaGTCTCCCCACCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SHASHKVPLKSFRKLPESLFWVQ*SPHQAP
Trigger: AGGAGCCTGGTGGGGAGACCACTGCACCCAAAACAA...GGATTCTGGAAGCTTCCTGAAGGATTTGAGTGGGACCTTGTGGGAGGCGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCAGAAAGGATTTGTTTTaGGTGCAGTGGTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPIRKDLF*VQWSPH
Trigger: GTGGGGAGACCACTGCACCCAAAACAAATCCTTTCT...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp GAAAGGCAGGAGCCTAATCTGATGGGAACATCACAGTCCTCAGCCTGGCTTACCTTACTCACCGCCCGCTaGCTGGCTGCTAACTCGAAA +
Preference number: 4 (lower is better)
Translates to: ERQEPNLMGTSQSSAWLTLLTAR*LAANSK
Trigger: TTTCGAGTTAGCAGCCAGCCAGCGGGCGGTGAGTAA...GGTAAGCCAGGCTGAGGACTGTGATGTTCCCATCAGATTAGGCTCCTGCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR TCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCTGCTAACTCGAAAGTaGACTTCTGCACACGGCGCT +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFLLTRK*TSAHGA
Trigger: AGCGCCGTGTGCAGAAGTTCACTTTCGAGTTAGCAG...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp TTCTTCAACTGTGAAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCCCGAGACTGGGGAACTaGAGATTCAGGCTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: FFNCEVLSTSLGSGCYQAPRLGN*RFRLGL
Trigger: TAGCCCTAGCCTGAATCTTCAGTTCCCCAGTCTCGG...GGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp TTCTTCAACTGTGAAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCCGACTCAGGAGACTCTaGTGCTGCAAGTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: FFNCEVLSTSLGSGCYQARLRRL*CCKSGT
Trigger: TGTCCCAGACTTGCAGCATCAGAGTCTCCTGAGTCG...GGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCAGAGGCTCGGAGATGTaGAATGACTTGCTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: FLASGITLLQYAPHTAPSRGSEM*NDLLKF
Trigger: GAACTTGAGCAAGTCATTTCACATCTCCGAGCCTCT...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp AGTGAGCACCCTGTCACCGGGGGAGTGTACACTACAGGAACAGGAAAGAGCAGATTTAGTGACCCCCAGTaGCATCTTAGCAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SEHPVTGGVYTTGTGKSRFSDPQ*HLSSQL
Trigger: AAGCTGGCTGCTAAGATGTCACTGGGGGTCACTAAA...TCTGCTCTTTCCTGTTCCTGTAGTGTACACTCCCCCGGTGACAGGGTGCTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp AGGAAAACTCATAGCACCCGCCCACCATGTCCTGGAGAATATCCAAGATGTGCGTTCTCCCACGTTAACTaGGCACCTACCAGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: RKTHSTRPPCPGEYPRCAFSHVN*APTRCG
Trigger: TCCGCACCTGGTAGGTGCTCAGTTAACGTGGGAGAA...CGCACATCTTGGATATTCTCCAGGACATGGTGGGCGGGTGCTATGAGTTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR GCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGATCGAAAGTGAACTTCTaGACACGGCGCTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRSKVNF*TRRCLF
Trigger: GAAGAGGCAGCGCCGTGTGCAGAAGTTCACTTTCGA...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCTTCTGCAGAACACCCTaGACCCGTGCTCAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFFCRTP*TRAQFH
Trigger: ATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAA...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTTACCCTTCTCCAATATaGGCCCCACACAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHAYPSPI*APHSTQ
Trigger: CTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTA...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCATAAGCACCCCACTTTaGACCTGTCCTGTTAGGTGC +
Preference number: 4 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSISTPL*TCPVRC
Trigger: GCACCTAACAGGACAGGTGCAAAGTGGGGTGCTTAT...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGGCCAGCATCGCCCGCTaGCTGGCTGCTAACTCGAAA +
Preference number: 4 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQASIAR*LAANSK
Trigger: TTTCGAGTTAGCAGCCAGCCAGCGGGCGATGCTGGC...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACCAGGGCCATTGGCATTaGCAACCGTCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYQGHWH*QPSPTP
Trigger: CGGAGTCGGGGACGGTTGCCAATGCCAATGGCCCTG...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTTTGGAGATGGCGGTGTaGTTGAACTTCTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHALEMAV*LNFSGG
Trigger: CCCGCCAGAGAAGTTCAACCACACCGCCATCTCCAA...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCAATTTCGGTAGTCGTTaGGGCTGGGGGTGTGACTTC +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFNFGSR*GWGCDF
Trigger: GAAGTCACACCCCCAGCCCCAACGACTACCGAAATT...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGCCAGGCCCCCGAGACTaGGGAACTGAAGATTCAGGC +
Preference number: 4 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQPGPRD*GTEDSG
Trigger: GCCTGAATCTTCAGTTCCCCAGTCTCGGGGGCCTGG...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TTCTTCAACTGTGAAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCGCTGTCCACAAGTCTTaGCTCCGGATGTTACCAGGC +
Preference number: 4 (lower is better)
Translates to: FFNCEVLSTSLGSGCYQAAVHKS*LRMLPG
Trigger: GCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGC...GGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACCAGGCTGGGGTGCAGTaGCGCAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYQAGVQ*RNLGSL
Trigger: CAGTGAGCCGAGATTGCGCCACTGCACCCCAGCCTG...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCATCAGGTTTTGTGTGTaGAGGCCCTTCTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRIRFCV*RPFFNC
Trigger: ACAGTTGAAGAAGGGCCTTCACACACAAAACCTGAT...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp AGTGAGCACCCTGTCACCGGGGGAGTGTACACTACAGGAACAGGAAAGAGCAGACTCGGAGATGTGAAATaGCTTGCTCAAGTTCATCCG +
Preference number: 4 (lower is better)
Translates to: SEHPVTGGVYTTGTGKSRLGDVK*LAQVHP
Trigger: CGGATGAACTTGAGCAAGTCATTTCACATCTCCGAG...TCTGCTCTTTCCTGTTCCTGTAGTGTACACTCCCCCGGTGACAGGGTGCTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp TCTCACGCCTCCCACAAGGTCCCACTCAAATCCTTCAGGAAGCTTCCAGAATCCAGAGCTCTACAGCAATaGGAGGCTTTCCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SHASHKVPLKSFRKLPESRALQQ*EAFLQA
Trigger: AGCCTGAAGGAAAGCCTCTCATTGCTGTAGAGCTCT...GGATTCTGGAAGCTTCCTGAAGGATTTGAGTGGGACCTTGTGGGAGGCGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp TTCTTCAACTGTGAAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCGACCCAGAAGGGGAGTaGAACTCCAGAGCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: FFNCEVLSTSLGSGCYQADPEGE*NSRAKG
Trigger: TCCTTTTGCTCTGGAGTTTCACTCCCCTTCTGGGTC...GGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp CTCCTCGAGGCCCGGGCCTGGCAGTGTCTAGCGCACAGTCAGCGCTTAGGAACTGCTCCTCAATATCTTTaGTTGACTTATCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LLEARAWQCLAHSQRLGTAPQYL*LTYPFL
Trigger: AAGAAAAGGATAAGTCAAGCAAAGATATTGAGGAGC...AGTTCCTAAGCGCTGACTGTGCGCTAGACACTGCCAGGCCCGGGCCTCGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297130.4
CDS-3UTR GCA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTTTCTGCAGAACACCCTaGACCCGTGCTCAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHAFCRTP*TRAQFH
Trigger: ATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAA...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCGCCAGCTTCTCATGCTaGATCCAGTGCAAGAACAAC +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFASFSC*IQCKNN
Trigger: GTTGTTCTTGCACTGGATGCAGCATGAGAAGCTGGC...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCTTCATACCTGGTGGCTaGAGTTACTTTCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSFIPGG*SYFPEH
Trigger: GTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAA...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTAGGATTTGTTTTGGGTaGAGTGGTCTCCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHARICFG*SGLPTR
Trigger: CCTGGTGGGGAGACCACTGCACCCAAAACAAATCCT...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTAATTTCGGTAGTCGTTaGGGCTGGGGGTGTGACTTC +
Preference number: 4 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHANFGSR*GWGCDF
Trigger: GAAGTCACACCCCCAGCCCCAACGACTACCGAAATT...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCTTATTCACAGGAAGATaGGGTGCCAGTGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFLFTGR*GASEHP
Trigger: AGGGTGCTCACTGGCACCCCATCTTCCTGTGAATAA...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGCTCACACCCCCTTCATaGACTCTCACGCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQLTPPS*TLTPPT
Trigger: TGTGGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAG...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGATTTGGTGTCTGCCCCTaGACAAGTCACTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRFGVCP*TSHFLL
Trigger: AAGGAGGAAGTGACTTGTCCAGGGGCAGACACCAAA...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCCCAAACCTGGCTTTAAATaGCAGCCCCCAAATTCAAGA +
Preference number: 4 (lower is better)
Translates to: LSRNTLPLTPPSWTLTPPKPGFK*QPPNSR
Trigger: TCTTGAATTTGGGGGCTGCCATTTAAAGCCAGGTTT...GGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCCCTTTTCATACCTGGTaGCTGCAGTTACTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: FLASGITLLQYAPHTAPSPFHTW*LQLLSR
Trigger: TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGG...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCAGAAAGGATTTGTTTTaGGTGCAGTGGTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSRKDLF*VQWSPH
Trigger: GTGGGGAGACCACTGCACCCAAAACAAATCCTTTCT...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCATCATCCTGAGAGGATaGGACCACAATAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFIILRG*DHNRQE
Trigger: CTCCTGCCTATTGTGGTCCCATCCTCTCAGGATGAT...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517768.6
CDS-3UTR CCA 90 bp TGTCCTGGAGAATATCCAAGATGTGCGGCACCTTCACTCTTCATTTCTCCCACGATGAATAGAAAGCGCTaGGGACAGAGCCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CPGEYPRCAAPSLFISPTMNRKR*GQSLAC
Trigger: GCAGGCCAGGCTCTGTCCCCAGCGCTTTCTATTCAT...CGTGGGAGAAATGAAGAGTGAAGGTGCCGCACATCTTGGATATTCTCCAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR CCA 90 bp GAAAGGCAGGAGCCTAATCTGATGGGAACATCACAGTCCTCAGCCTGGCTTACCGGGAGGAGAAGGTTCTaGGAAAGATCAGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: ERQEPNLMGTSQSSAWLTGRRRF*ERSGVQ
Trigger: CTGAACTCCTGATCTTTCCCAGAACCTTCTCCTCCC...GGTAAGCCAGGCTGAGGACTGTGATGTTCCCATCAGATTAGGCTCCTGCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR TCA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTTACCAGCCCAAGCACTaGGGCACTCGATATAAAGCT +
Preference number: 4 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHAYQPKH*GTRYKA
Trigger: AGCTTTATATCGAGTGCCTCAGTGCTTGGGCTGGTA...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp AGTCCTCAGCCTGGCTTACCGTTTGACTTTAGGCTAACCAGTGGCTCTCTGTGGTCCTCATTTTCCCCATaGGCACAATGGTGGCTTACT +
Preference number: 4 (lower is better)
Translates to: SPQPGLPFDFRLTSGSLWSSFSP*AQWWLT
Trigger: AGTAAGCCACCATTGTGCTCATGGGGAAAATGAGGA...CCACAGAGAGCCACTGGTTAGCCTAAAGTCAAACGGTAAGCCAGGCTGAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR TCA 90 bp CAGAGTCCCTTCACTCCACGGCTTATCCTCAACCCCCTAATCCACTTTGTTTACGGCAGGAGCCTAATCTaGTGGGAACATCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: QSPFTPRLILNPLIHFVYGRSLI*WEHHSP
Trigger: AGGACTGTGATGTTCCCATCAGATTAGGCTCCTGCC...GTAAACAAAGTGGATTAGGGGGTTGAGGATAAGCCGTGGAGTGAAGGGACTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR GCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCAGGGACTCCTTCTTCTaGTCCACAACACTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFRDSFF*STTLCS
Trigger: GGAACAAAGTGTTGTGGAGCAGAAGAAGGAGTCCCT...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCCCTCAGTTCCATATTTTTaGACATGCTGGTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: LSRNTLPLTPPSWTLTPPSVPYF*TCWSTF
Trigger: GAAAGTGGACCAGCATGTGCAAAAATATGGAACTGA...GGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCGCATTGACCACCCAGTaGACTGAAAAGAGACATCCA +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFALTTQ*TEKRHP
Trigger: TGGATGTCTCTTTTCAGTGCACTGGGTGGTCAATGC...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCTCTGACTCCCAAGCCTaGACTCAACTTCTAAACTCC +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFSDSQA*TQLLNS
Trigger: GGAGTTTAGAAGTTGAGTGCAGGCTTGGGAGTCAGA...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGATCTGACTCCCAAGCCTaGACTCAACTTCTAAACTCC +
Preference number: 4 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRSDSQA*TQLLNS
Trigger: GGAGTTTAGAAGTTGAGTGCAGGCTTGGGAGTCAGA...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCTCATGCTGCATCCAGTaGAAGAACAACTTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSSCCIQ*KNNFSS
Trigger: GCTGGAAAAGTTGTTCTTGCACTGGATGCAGCATGA...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp ACAGGAAAACTCATAGCACCCGCCCACCATGTCCTGGAGAATATCCAAGATGTGAATTTCGGTAGTCGTTaGGGCTGGGGGTGTGACTTC +
Preference number: 4 (lower is better)
Translates to: TGKLIAPAHHVLENIQDVNFGSR*GWGCDF
Trigger: GAAGTCACACCCCCAGCCCCAACGACTACCGAAATT...CACATCTTGGATATTCTCCAGGACATGGTGGGCGGGTGCTATGAGTTTTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR CCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGGAGGGGTCCTCCAAATaGCACCGGGGTCTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQEGSSK*HRGLVE
Trigger: TTCAACAAGACCCCGGTGCCATTTGGAGGACCCCTC...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TCTCACGCCTCCCACAAGGTCCCACTCAAATCCTTCAGGAAGCTTCCAGAATCCCTATTTTGGCCAGACTaGTCTCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: SHASHKVPLKSFRKLPESLFWPD*SQTPDL
Trigger: GAGGTCAGGAGTTTGAGACCAGTCTGGCCAAAATAG...GGATTCTGGAAGCTTCCTGAAGGATTTGAGTGGGACCTTGTGGGAGGCGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TTCTTCAACTGTGAAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCTTTGGTGTCTGCCCCTaGACAAGTCACTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: FFNCEVLSTSLGSGCYQAFGVCP*TSHFLL
Trigger: AAGGAGGAAGTGACTTGTCCAGGGGCAGACACCAAA...GGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR CAA 72 bp GCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTaGCACATGCTGGTCCACTTTCCAGAAATACCCTCC +
Preference number: 4 (lower is better)
Translates to: AEHPAPVLSSIF*HMLVHFPEIPS
Trigger: GGAGGGTATTTCTGGAAAGTGGACCAGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGGCACCGGGGTCTTGTTaGAATTTCGGTAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQAPGSC*NFGSRW
Trigger: CCAACGACTACCGAAATTTCAACAAGACCCCGGTGC...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp CCTTCTCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCAAGAGGCTCGGAGATGTaGAATGACTTGCTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: PSPFCRTPCTRAQFHIFARGSEM*NDLLKF
Trigger: GAACTTGAGCAAGTCATTTCACATCTCCGAGCCTCT...TGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp TTCTTCAACTGTGAAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCAGAGCAGCAGTTGCATaGAACCTACCATTGACTGAG +
Preference number: 4 (lower is better)
Translates to: FFNCEVLSTSLGSGCYQARAAVA*NLPLTE
Trigger: CTCAGTCAATGGTAGGTTTCATGCAACTGCTGCTCT...GGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp CACACTGAAAGGCAGGAGCCTAATCTGATGGGAACATCACAGTCCTCAGCCTGGGTGTTTGTTGCTCAGTaGAGTTTAGCACTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: HTERQEPNLMGTSQSSAWVFVAQ*SLALFP
Trigger: CGGAAACAGTGCTAAACTTCACTGAGCAACAAACAC...CCAGGCTGAGGACTGTGATGTTCCCATCAGATTAGGCTCCTGCCTTTCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR GCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGTCGAAAGTGAACTTCTaGACACGGCGCTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQSKVNF*TRRCLF
Trigger: GAAGAGGCAGCGCCGTGTGCAGAAGTTCACTTTCGA...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCTCTTCAACTGTGAAGTaGTGTCCACAAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFSSTVK*CPQVLA
Trigger: AGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGA...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCACCATGGATAAGTTATaGTGGAATCACCTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSTMDKL*WNHLEY
Trigger: GTACTCCAGGTGATTCCAGCATAACTTATCCATGGT...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTAACACCCTGCACCCGTaGTCAGTTCCATATTTTTGC +
Preference number: 4 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHANTLHP*SVPYFC
Trigger: GCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTT...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp TCTCACGCCTCCCACAAGGTCCCACTCAAATCCTTCAGGAAGCTTCCAGAATCCTCATGCTGCATCCAGTaGAAGAACAACTTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SHASHKVPLKSFRKLPESSCCIQ*KNNFSS
Trigger: GCTGGAAAAGTTGTTCTTGCACTGGATGCAGCATGA...GGATTCTGGAAGCTTCCTGAAGGATTTGAGTGGGACCTTGTGGGAGGCGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCATGGATAAGTTATGCTaGAATCACCTGGAGTACTGG +
Preference number: 4 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSMDKLC*NHLEYW
Trigger: CCAGTACTCCAGGTGATTCCAGCATAACTTATCCAT...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCTTCTCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCAGCAGAGGTGTGGATGTaGACTCCTAATGACACAAAC +
Preference number: 4 (lower is better)
Translates to: PSPFCRTPCTRAQFHIFAAEVWM*TPNDTN
Trigger: GTTTGTGTCATTAGGAGTCCACATCCACACCTCTGC...TGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp AGTGAGCACCCTGTCACCGGGGGAGTGTACACTACAGGAACAGGAAAGAGCAGAAAACCTGGCTTTAAATaGCAGCCCCCAAATTCAAGA +
Preference number: 4 (lower is better)
Translates to: SEHPVTGGVYTTGTGKSRKPGFK*QPPNSR
Trigger: TCTTGAATTTGGGGGCTGCCATTTAAAGCCAGGTTT...TCTGCTCTTTCCTGTTCCTGTAGTGTACACTCCCCCGGTGACAGGGTGCTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGACTGGTCTTCAGCTCATaGAAACCTGGCTTTAAATGG +
Preference number: 4 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRLVFSS*KPGFKW
Trigger: CCATTTAAAGCCAGGTTTCCATGAGCTGAAGACCAG...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp AAAATGCAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCTTTTCATACCTGGTaGCTGCAGTTACTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: KMQSLSHTPWEWAGLLTFPFHTW*LQLLSR
Trigger: TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGG...GAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR CAA 72 bp ATTGCAAGCAATTCTAAAAGTCAGGCCATTGGGCCCTaGGGACCCAGAAGGGGAGTGAAACTCCAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: IASNSKSQAIGP*GPRRGVKLQSK
Trigger: TTTGCTCTGGAGTTTCACTCCCCTTCTGGGTCCCAAGGGCCCAATGGCCTGACTTTTAGAATTGCTTGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGTACCAGCCCAAGCACTaGGGCACTCGATATAAAGCT +
Preference number: 4 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQYQPKH*GTRYKA
Trigger: AGCTTTATATCGAGTGCCTCAGTGCTTGGGCTGGTA...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACGACCCAGAAGGGGAGTaGAACTCCAGAGCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYDPEGE*NSRAKG
Trigger: TCCTTTTGCTCTGGAGTTTCACTCCCCTTCTGGGTC...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp AGTCCTCAGCCTGGCTTACCGTTTGACTTTAGGCTAACCAGTGGCTCTCTGTGGGGTGTCATGATTGTTTaGAATCTTTGCCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: SPQPGLPFDFRLTSGSLWGVMIV*NLCPPD
Trigger: ATCAGGTGGGCAAAGATTTCAAACAATCATGACACC...CCACAGAGAGCCACTGGTTAGCCTAAAGTCAAACGGTAAGCCAGGCTGAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR GCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAACCATGGATAAGTTATaGTGGAATCACCTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRTMDKL*WNHLEY
Trigger: GTACTCCAGGTGATTCCAGCATAACTTATCCATGGT...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCCCATTATGGTGACTTCATaGTCTATAATGTCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: LSRNTLPLTPPSWTLTPPIMVTS*SIMSSL
Trigger: TAGGGAAGACATTATAGAGCATGAAGTCACCATAAT...GGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCATTATAAATGTGCCCTaGACTGTGTTCACAACAAAC +
Preference number: 4 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRIINVP*TVFTTN
Trigger: GTTTGTTGTGAACACAGTGCAGGGCACATTTATAAT...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGGCCAGCTTCTCATGCTaGATCCAGTGCAAGAACAAC +
Preference number: 4 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQASFSC*IQCKNN
Trigger: GTTGTTCTTGCACTGGATGCAGCATGAGAAGCTGGC...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp CACACTGAAAGGCAGGAGCCTAATCTGATGGGAACATCACAGTCCTCAGCCTGGGCCATTTGTGTTTATTaGATGAATTCCCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: HTERQEPNLMGTSQSSAWAICVY*MNSPCR
Trigger: CCTGCATGGGGAATTCATGCAATAAACACAAATGGC...CCAGGCTGAGGACTGTGATGTTCCCATCAGATTAGGCTCCTGCCTTTCAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR CCA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCTCCACATCTGTAAAGTaGGGACAACAATATCTTTCT +
Preference number: 4 (lower is better)
Translates to: FLASGITLLQYAPHTAPSSTSVK*GQQYLS
Trigger: AGAAAGATATTGTTGTCCCCACTTTACAGATGTGGA...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCAAAAGAGACATCCACTaGAATCAGATTCCCATTTGG +
Preference number: 4 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSKRDIH*NQIPIW
Trigger: CCAAATGGGAATCTGATTCCAGTGGATGTCTCTTTT...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp TGGTCTCCCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGAACTGTTTAGAGCATaGATAGATGAAGACCAACTG +
Preference number: 4 (lower is better)
Translates to: WSPHQAPFHTWWLQLLSRELFRA*IDEDQL
Trigger: CAGTTGGTCTTCATCTATTCATGCTCTAAACAGTTC...TCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGGGAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp CGGCTTATCCTCAACCCCCTAATCCACTTTGTTTACTTTGTTCTGTATCCAGGGATGAGTGAGAGAGGATaGCTGCAAGGTTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RLILNPLIHFVYFVLYPGMSERG*LQGFWP
Trigger: AGGCCAGAAACCTTGCAGTCATCCTCTCTCACTCAT...CCCTGGATACAGAACAAAGTAAACAAAGTGGATTAGGGGGTTGAGGATAAGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR TCA 90 bp GCTTATCCTCAACCCCCTAATCCACTTTGTTTACTTTGTTCTGTATCCAGGGAGGGTATGGGCAATGAGTaGGAGAGGATGACTGCAAGG +
Preference number: 4 (lower is better)
Translates to: AYPQPPNPLCLLCSVSREGMGNE*ERMTAR
Trigger: CCTTGCAGTCATCCTCTCTCACTCATTGCCCATACC...CTCCCTGGATACAGAACAAAGTAAACAAAGTGGATTAGGGGGTTGAGGATAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR TCA 90 bp GCTTATCCTCAACCCCCTAATCCACTTTGTTTACTTTGTTCTGTATCCAGGGAGCATGGGTATGGGCAATaGGTGAGAGAGGATGACTGC +
Preference number: 4 (lower is better)
Translates to: AYPQPPNPLCLLCSVSREHGYGQ*VREDDC
Trigger: GCAGTCATCCTCTCTCACTCATTGCCCATACCCATG...CTCCCTGGATACAGAACAAAGTAAACAAAGTGGATTAGGGGGTTGAGGATAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR GCA 90 bp GCTTATCCTCAACCCCCTAATCCACTTTGTTTACTTTGTTCTGTATCCAGGGAGTCGAAAGTGAACTTCTaGACACGGCGCTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AYPQPPNPLCLLCSVSRESKVNF*TRRCLF
Trigger: GAAGAGGCAGCGCCGTGTGCAGAAGTTCACTTTCGA...CTCCCTGGATACAGAACAAAGTAAACAAAGTGGATTAGGGGGTTGAGGATAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR GCA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCATTATGGTGACTTCATaGTCTATAATGTCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRIMVTS*SIMSSL
Trigger: TAGGGAAGACATTATAGAGCATGAAGTCACCATAAT...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp TCTCACGCCTCCCACAAGGTCCCACTCAAATCCTTCAGGAAGCTTCCAGAATCCTCAGTTCCATATTTTTaGACATGCTGGTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: SHASHKVPLKSFRKLPESSVPYF*TCWSTF
Trigger: GAAAGTGGACCAGCATGTGCAAAAATATGGAACTGA...GGATTCTGGAAGCTTCCTGAAGGATTTGAGTGGGACCTTGTGGGAGGCGTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp TTCTTCAACTGTGAAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCAGAGCAAAAGGAAAATaGAATCGCTATCCCACACAC +
Preference number: 4 (lower is better)
Translates to: FFNCEVLSTSLGSGCYQARAKGK*NRYPTH
Trigger: GTGTGTGGGATAGCGATTGCATTTTCCTTTTGCTCT...GGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGGAAAGAGCAGAGGTGTaGATGTGGACTCCTAATGAC +
Preference number: 4 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQERAEV*MWTPND
Trigger: GTCATTAGGAGTCCACATCCACACCTCTGCTCTTTC...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACCTCGGAGATGTGAAATaGCTTGCTCAAGTTCATCCG +
Preference number: 4 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYLGDVK*LAQVHP
Trigger: CGGATGAACTTGAGCAAGTCATTTCACATCTCCGAG...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp TTCTTCAACTGTGAAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCCCATATTTTTGCACATaGTGGTCCACTTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: FFNCEVLSTSLGSGCYQAPYFCT*WSTFQK
Trigger: TTTCTGGAAAGTGGACCAGCATGTGCAAAAATATGG...GGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp ACAGGAAAACTCATAGCACCCGCCCACCATGTCCTGGAGAATATCCAAGATGTGAGAATATCCAAGATGTaGGGCACCTTCACTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TGKLIAPAHHVLENIQDVRISKM*GTFTLH
Trigger: ATGAAGAGTGAAGGTGCCGCACATCTTGGATATTCT...CACATCTTGGATATTCTCCAGGACATGGTGGGCGGGTGCTATGAGTTTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR GCA 90 bp GCTTATCCTCAACCCCCTAATCCACTTTGTTTACTTTGTTCTGTATCCAGGGAGGTGAGAGAGGATGACTaGAAGGTTTCTGGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: AYPQPPNPLCLLCSVSREVREDD*KVSGLS
Trigger: GCTAAGGCCAGAAACCTTGCAGTCATCCTCTCTCAC...CTCCCTGGATACAGAACAAAGTAAACAAAGTGGATTAGGGGGTTGAGGATAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR GCA 90 bp CACACTGAAAGGCAGGAGCCTAATCTGATGGGAACATCACAGTCCTCAGCCTGGTTTGCATGTGTTTGTTaGTCAGTGAAGTTTAGCACT +
Preference number: 4 (lower is better)
Translates to: HTERQEPNLMGTSQSSAWFACVC*SVKFST
Trigger: AGTGCTAAACTTCACTGAGCAACAAACACATGCAAA...CCAGGCTGAGGACTGTGATGTTCCCATCAGATTAGGCTCCTGCCTTTCAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR CCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACGACAGTCCAGTTGTCTaGATTTGGAACAACATCCCC +
Preference number: 4 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYDSPVV*IWNNIP
Trigger: GGGGATGTTGTTCCAAATCCAGACAACTGGACTGTC...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCTTCTCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCATATGCTGGAATCACCTaGAGTACTGGTTGCTATTTA +
Preference number: 4 (lower is better)
Translates to: PSPFCRTPCTRAQFHIFAYAGIT*STGCYL
Trigger: TAAATAGCAACCAGTACTCCAGGTGATTCCAGCATA...TGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACGAAAGAGCAGAGGTGTaGATGTGGACTCCTAATGAC +
Preference number: 4 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYERAEV*MWTPND
Trigger: GTCATTAGGAGTCCACATCCACACCTCTGCTCTTTC...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACATGCTAAAAGAGACATCCACTaGAATCAGATTCCCATTTGG +
Preference number: 4 (lower is better)
Translates to: PFCRTPCTRAQFHIFAHAKRDIH*NQIPIW
Trigger: CCAAATGGGAATCTGATTCCAGTGGATGTCTCTTTT...AGCATGTGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CACACTGAAAGGCAGGAGCCTAATCTGATGGGAACATCACAGTCCTCAGCCTGGGTTTCCGAAGTTCTTTaGCCATTTGTGTTTATTGCA +
Preference number: 4 (lower is better)
Translates to: HTERQEPNLMGTSQSSAWVSEVL*PFVFIA
Trigger: TGCAATAAACACAAATGGCCAAAGAACTTCGGAAAC...CCAGGCTGAGGACTGTGATGTTCCCATCAGATTAGGCTCCTGCCTTTCAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615557.1
3UTR CAA 72 bp GATGCTGCAAGTCTGGGACAGTCCAGTTGTCTGGATTaGGAACAACATCCCCAGGTAATTTTGAAACACACC +
Preference number: 4 (lower is better)
Translates to: DAASLGQSSCLD*EQHPQVILKHT
Trigger: GGTGTGTTTCAAAATTACCTGGGGATGTTGTTCCAAATCCAGACAACTGGACTGTCCCAGACTTGCAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR CAA 72 bp ACTGAAAAGAGACATCCACTGGAATCAGATTCCCATTaGGTGTCTGCCCCTGGACAAGTCACTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TEKRHPLESDSH*VSAPGQVTSSF
Trigger: AAAGGAGGAAGTGACTTGTCCAGGGGCAGACACCAAATGGGAATCTGATTCCAGTGGATGTCTCTTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACTCTTCAACTGTGAAGTaGTGTCCACAAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYSSTVK*CPQVLA
Trigger: AGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGA...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TCTCACGCCTCCCACAAGGTCCCACTCAAATCCTTCAGGAAGCTTCCAGAATCCCTGCTCAAAATGGAGTaGAAAGAAGGAATCTTAATA +
Preference number: 4 (lower is better)
Translates to: SHASHKVPLKSFRKLPESLLKME*KEGILI
Trigger: TATTAAGATTCCTTCTTTCCACTCCATTTTGAGCAG...GGATTCTGGAAGCTTCCTGAAGGATTTGAGTGGGACCTTGTGGGAGGCGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCTTCTCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCATCCACATCTGTAAAGTaGGGACAACAATATCTTTCT +
Preference number: 4 (lower is better)
Translates to: PSPFCRTPCTRAQFHIFASTSVK*GQQYLS
Trigger: AGAAAGATATTGTTGTCCCCACTTTACAGATGTGGA...TGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR CAA 72 bp CAACATCCCCAGGTAATTTTGAAACACACCCATGTTTaGGGACGACTGAACTTGGTGACCTCTGAAGCCATT +
Preference number: 4 (lower is better)
Translates to: QHPQVILKHTHV*GRLNLVTSEAI
Trigger: AATGGCTTCAGAGGTCACCAAGTTCAGTCGTCCCAAAACATGGGTGTGTTTCAAAATTACCTGGGGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR GCA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACAGAGCAAAAGGAAAATaGAATCGCTATCCCACACAC +
Preference number: 4 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYRAKGK*NRYPTH
Trigger: GTGTGTGGGATAGCGATTGCATTTTCCTTTTGCTCT...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp CCTTCTCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCACTGCTCAAAATGGAGTaGAAAGAAGGAATCTTAATA +
Preference number: 4 (lower is better)
Translates to: PSPFCRTPCTRAQFHIFALLKME*KEGILI
Trigger: TATTAAGATTCCTTCTTTCCACTCCATTTTGAGCAG...TGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
3UTR CAA 72 bp AGTTGTCTGGATTTGGAACAACATCCCCAGGTAATTTaGAAACACACCCATGTTTTGGGACGACTGAACTTG +
Preference number: 4 (lower is better)
Translates to: SCLDLEQHPQVI*KHTHVLGRLNL
Trigger: CAAGTTCAGTCGTCCCAAAACATGGGTGTGTTTCAAAATTACCTGGGGATGTTGTTCCAAATCCAGACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR TCA 90 bp TTGTTTACTTTGTTCTGTATCCAGGGAGAGATGCCTAAAAAGATAACACTTTTCCTGCTAACTCGAAAGTaGACTTCTGCACACGGCGCT +
Preference number: 4 (lower is better)
Translates to: LFTLFCIQGEMPKKITLFLLTRK*TSAHGA
Trigger: AGCGCCGTGTGCAGAAGTTCACTTTCGAGTTAGCAG...GAAAAGTGTTATCTTTTTAGGCATCTCTCCCTGGATACAGAACAAAGTAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615557.1
3UTR CAA 72 bp TGTGTTCACAACAAACCCATAAAGGAGGTTTTATACTaGTCCTCATCTTACACTTGGAGAAACAGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: CVHNKPIKEVLY*SSSYTWRNRGS
Trigger: CGAGCCTCTGTTTCTCCAAGTGTAAGATGAGGACAAGTATAAAACCTCCTTTATGGGTTTGTTGTGAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CCA 90 bp TTGTTTACTTTGTTCTGTATCCAGGGAGAGATGCCTAAAAAGATAACACTTTTCGGTAAGCCATGGGTATaGGCAATGAGTGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LFTLFCIQGEMPKKITLFGKPWV*AMSERG
Trigger: TCCTCTCTCACTCATTGCCCATACCCATGGCTTACC...GAAAAGTGTTATCTTTTTAGGCATCTCTCCCTGGATACAGAACAAAGTAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR GCA 90 bp TTGTTTACTTTGTTCTGTATCCAGGGAGAGATGCCTAAAAAGATAACACTTTTCTGCATGAATTCCCCATaGAGGTCTTTGCCCATAATG +
Preference number: 4 (lower is better)
Translates to: LFTLFCIQGEMPKKITLFCMNSP*RSLPIM
Trigger: CATTATGGGCAAAGACCTGCATGGGGAATTCATGCA...GAAAAGTGTTATCTTTTTAGGCATCTCTCCCTGGATACAGAACAAAGTAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS CCA 90 bp GCAGTGAGGAAGCCACGAGTTCGCAGCGCGGGTTGGTCTTGGCCTTaGCTGACTCGCTGTGTGACCTGGGGCGCGGCGCCCCTCCGGCTC +
Preference number: 5 (lower is better)
Translates to: AVRKPRVRSAGWSWP*LTRCVTWGAAPLRL
Trigger: GAGCCGGAGGGGCGCCGCGCCCCAGGTCACACAGCGAGTCAGCCAAGGCCAAGACCAACCCGCGCTGCGAACTCGTGGCTTCCTCACTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520112.1
CDS CCA 90 bp AGGGCAGCGGTAGCCCTTGGAGATGGCGGTGTGGTTGAACTTCTCTaGCGGGACGCCCTTCAGCGGCTCCGCATAGCCTGGCGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RAAVALGDGGVVELL*RDALQRLRIAWRQG
Trigger: GCCCTGGCGCCAGGCTATGCGGAGCCGCTGAAGGGCGTCCCGCCAGAGAAGTTCAACCACACCGCCATCTCCAAGGGCTACCGCTGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000521300.1
ENST00000523553.1
ENST00000524256.1
CDS CCA 90 bp ACACGGAGGACTGCAGTGAGGAAGCCACGAGTTCGCAGCGCGGGTTaGTCTTGGCCTTGGCTGACTCGCTGTGTGACCTGGGGCGCGGCG +
Preference number: 5 (lower is better)
Translates to: TRRTAVRKPRVRSAG*SWPWLTRCVTWGAA
Trigger: CGCCGCGCCCCAGGTCACACAGCGAGTCAGCCAAGGCCAAGACCAACCCGCGCTGCGAACTCGTGGCTTCCTCACTGCAGTCCTCCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520112.1
CDS TCA 90 bp GGCTGGGGGTGTGACTTCGGCCATCGCTCTGGTAGTCCCGGTAGCTaGCGAACTCCTGCCAAGGGCAGCGGTAGCCCTTGGAGATGGCGG +
Preference number: 5 (lower is better)
Translates to: GWGCDFGHRSGSPGS*RTPAKGSGSPWRWR
Trigger: CCGCCATCTCCAAGGGCTACCGCTGCCCTTGGCAGGAGTTCGTCAGCTACCGGGACTACCAGAGCGATGGCCGAAGTCACACCCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000520112.1
ENST00000521300.1
ENST00000523553.1
CDS TCA 90 bp ACTCCTGCCAAGGGCAGCGGTAGCCCTTGGAGATGGCGGTGTGGTTaGACTTCTCTGGCGGGACGCCCTTCAGCGGCTCCGCATAGCCTG +
Preference number: 5 (lower is better)
Translates to: TPAKGSGSPWRWRCG*TSLAGRPSAAPHSL
Trigger: CAGGCTATGCGGAGCCGCTGAAGGGCGTCCCGCCAGAGAAGTTCAACCACACCGCCATCTCCAAGGGCTACCGCTGCCCTTGGCAGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000521300.1
ENST00000523553.1
ENST00000524256.1
CDS TCA 90 bp GCACAGGAGACCCCTCCCCATCCCAGGAAACACGGAGGACTGCAGTaGGGAAGCCACGAGTTCGCAGCGCGGGTTGGTCTTGGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: AQETPPHPRKHGGLQ*GSHEFAARVGLGLG
Trigger: GCCAAGGCCAAGACCAACCCGCGCTGCGAACTCGTGGCTTCCTCACTGCAGTCCTCCGTGTTTCCTGGGATGGGGAGGGGTCTCCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520112.1
CDS TCA 90 bp CGCTTCCGGCCAGCATCGCCCGCTGGCTGGCTGCTAACTCGAAAGTaGACTTCTGCACACGGCGCTGCCTCTTCTGGAAGAGGAGGGACC +
Preference number: 5 (lower is better)
Translates to: RFRPASPAGWLLTRK*TSAHGAASSGRGGT
Trigger: GGTCCCTCCTCTTCCAGAAGAGGCAGCGCCGTGTGCAGAAGTTCACTTTCGAGTTAGCAGCCAGCCAGCGGGCGATGCTGGCCGGAAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS TCA 90 bp ACTCCTGCCAAGGGCAGCGGTAGCCCTTGGAGATGGCGGTGTGGTTaGACTTCTCTGGCGGGACGCCCTTCAGCGGCTCCGCATAGCCTA +
Preference number: 5 (lower is better)
Translates to: TPAKGSGSPWRWRCG*TSLAGRPSAAPHSL
Trigger: TAGGCTATGCGGAGCCGCTGAAGGGCGTCCCGCCAGAGAAGTTCAACCACACCGCCATCTCCAAGGGCTACCGCTGCCCTTGGCAGGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520112.1
CDS-3UTR CAA 90 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCCCGGCCCCTCAGGGCCATaGGCATTGGCAACCGTCCCC +
Preference number: 5 (lower is better)
Translates to: LSRNTLPLTPPSWTLTPPGPSGP*ALATVP
Trigger: GGGGACGGTTGCCAATGCCAATGGCCCTGAGGGGCC...GGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCCCCAGGCCATTGGGCCCTaGGGACCCAGAAGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: LSRNTLPLTPPSWTLTPPQAIGP*GPRRGV
Trigger: CACTCCCCTTCTGGGTCCCAAGGGCCCAATGGCCTG...GGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS GCA 90 bp GCACACGGCGCTGCCTCTTCTGGAAGAGGAGGGACCCTCTGTTGTTaGGTAGTGACAGCTCCTCCATCATCAGGTCCTGGGGCACGCTCA +
Preference number: 5 (lower is better)
Translates to: AHGAASSGRGGTLCC*VVTAPPSSGPGARS
Trigger: TGAGCGTGCCCCAGGACCTGATGATGGAGGAGCTGTCACTACGCAACAACAGAGGGTCCCTCCTCTTCCAGAAGAGGCAGCGCCGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000517861.1
ENST00000615557.1
CDS GCA 90 bp GCCAGCATCGCCCGCTGGCTGGCTGCTAACTCGAAAGTGAACTTCTaGACACGGCGCTGCCTCTTCTGGAAGAGGAGGGACCCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: ASIARWLAANSKVNF*TRRCLFWKRRDPLL
Trigger: CAACAGAGGGTCCCTCCTCTTCCAGAAGAGGCAGCGCCGTGTGCAGAAGTTCACTTTCGAGTTAGCAGCCAGCCAGCGGGCGATGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS CCA 90 bp CCAAGGTCAACACGGGCAGGCCTGGGGTCTGCATTCAAGTCCACGTaGAGGCCTCACGCTCTAAACCCATATAGGCCACTGCGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: PRSTRAGLGSAFKST*RPHALNPYRPLRCG
Trigger: GCCACAGCGCAGTGGCCTATATGGGTTTAGAGCGTGAGGCCTCCACGTGGACTTGAATGCAGACCCCAGGCCTGCCCGTGTTGACCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS CCA 90 bp GACCCTCTGTTGTTGCGTAGTGACAGCTCCTCCATCATCAGGTCCTaGGGCACGCTCAGCTTCTTGCCCAGGTCCAGCGTAGGGACTGCC +
Preference number: 5 (lower is better)
Translates to: DPLLLRSDSSSIIRS*GTLSFLPRSSVGTA
Trigger: GGCAGTCCCTACGCTGGACCTGGGCAAGAAGCTGAGCGTGCCCCAGGACCTGATGATGGAGGAGCTGTCACTACGCAACAACAGAGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR CAA 90 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCCCTCAGGGCCATTGGCATaGGCAACCGTCCCCGACTCC +
Preference number: 5 (lower is better)
Translates to: LSRNTLPLTPPSWTLTPPSGPLA*ATVPDS
Trigger: GGAGTCGGGGACGGTTGCCAATGCCAATGGCCCTGA...GGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp AGTGAGCACCCTGTCACCGGGGGAGTGTACACTACAGGAACAGGAAAGAGCAGAGGCCCCTCAGGGCCATaGGCATTGGCAACCGTCCCC +
Preference number: 5 (lower is better)
Translates to: SEHPVTGGVYTTGTGKSRGPSGP*ALATVP
Trigger: GGGGACGGTTGCCAATGCCAATGGCCCTGAGGGGCC...TCTGCTCTTTCCTGTTCCTGTAGTGTACACTCCCCCGGTGACAGGGTGCTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp AAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCCCCGAGACTGGGGGAGATGGCGGTGTGGTaGAACTTCTCTGGCGGGACG +
Preference number: 5 (lower is better)
Translates to: KCCPQVLAPDVTRPPRLGEMAVW*NFSGGT
Trigger: CGTCCCGCCAGAGAAGTTCAACCACACCGCCATCTC...CCCCAGTCTCGGGGGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp AAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCCCCGAGACTGGGGGGCCCCTTCTGCTCCTaGGGGATCATCCTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: KCCPQVLAPDVTRPPRLGGPFCS*GIILRG
Trigger: TCCTCTCAGGATGATCCCCAAGGAGCAGAAGGGGCC...CCCCAGTCTCGGGGGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000517768.6
CDS TCA 90 bp ATGGTGGCTTACTCACCGCCCGCTGGCTGGCTGCTAACTCGAAAGTaGACTTCTGCACACGGCGCTGCCTCTTCTGGAAGAGGAGGGACC +
Preference number: 5 (lower is better)
Translates to: MVAYSPPAGWLLTRK*TSAHGAASSGRGGT
Trigger: GGTCCCTCCTCTTCCAGAAGAGGCAGCGCCGTGTGCAGAAGTTCACTTTCGAGTTAGCAGCCAGCCAGCGGGCGGTGAGTAAGCCACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517861.1
ENST00000615557.1
CDS CCA 90 bp GACCCTCTGTTGTTGCGTAGTGACAGCTCCTCCATCATCAGGTCCTaGGGCACGCTCAGCTTCTTGCCCAGGTCCAGCGTAGGGACTGGT +
Preference number: 5 (lower is better)
Translates to: DPLLLRSDSSSIIRS*GTLSFLPRSSVGTG
Trigger: ACCAGTCCCTACGCTGGACCTGGGCAAGAAGCTGAGCGTGCCCCAGGACCTGATGATGGAGGAGCTGTCACTACGCAACAACAGAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000517861.1
CDS TCA 90 bp CAAGTCTTGGCTCCGGATGTTACCAGGCCCCCGAGACTGGGGAACTaGAGATTCAGGCTAGGGCTACAGCTCCTCGGACTCTGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: QVLAPDVTRPPRLGN*RFRLGLQLLGLWEV
Trigger: AACCTCCCAGAGTCCGAGGAGCTGTAGCCCTAGCCTGAATCTTCAGTTCCCCAGTCTCGGGGGCCTGGTAACATCCGGAGCCAAGACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297130.4
ENST00000456566.2
ENST00000517768.6
ENST00000521300.1
CDS GCA 90 bp TTACTCACCGCCCGCTGGCTGGCTGCTAACTCGAAAGTGAACTTCTaGACACGGCGCTGCCTCTTCTGGAAGAGGAGGGACCCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: LLTARWLAANSKVNF*TRRCLFWKRRDPLL
Trigger: CAACAGAGGGTCCCTCCTCTTCCAGAAGAGGCAGCGCCGTGTGCAGAAGTTCACTTTCGAGTTAGCAGCCAGCCAGCGGGCGGTGAGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517861.1
ENST00000615557.1
CDS CCA 90 bp AAAGAGGTAGCACACAGCAGCCATGGAGAACAAGGCACTGGGCTCTaGAGTCAGACAAACCCAGACCTGAATCCCGGCCCTGCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: KEVAHSSHGEQGTGL*SQTNPDLNPGPAGA
Trigger: AGCACCGGCAGGGCCGGGATTCAGGTCTGGGTTTGTCTGACTCCAGAGCCCAGTGCCTTGTTCTCCATGGCTGCTGTGTGCTACCTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS-3UTR CAA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCGAGATGGCGGTGTGGTaGAACTTCTCTGGCGGGACG +
Preference number: 5 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSREMAVW*NFSGGT
Trigger: CGTCCCGCCAGAGAAGTTCAACCACACCGCCATCTC...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCCAGAGCGAGTGGGCATaGACCACCCAGTGCACTGAA +
Preference number: 5 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPIQSEWA*TTQCTE
Trigger: TTCAGTGCACTGGGTGGTCAATGCCCACTCGCTCTG...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS GCA 90 bp CGCTGGCTGGCTGCTAACTCGAAAGTGAACTTCTGCACACGGCGCTaGCTCTTCTGGAAGAGGAGGGACCCTCTGTTGTTGCGTAGTGAC +
Preference number: 5 (lower is better)
Translates to: RWLAANSKVNFCTRR*LFWKRRDPLLLRSD
Trigger: GTCACTACGCAACAACAGAGGGTCCCTCCTCTTCCAGAAGAGGCAGCGCCGTGTGCAGAAGTTCACTTTCGAGTTAGCAGCCAGCCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000517861.1
ENST00000615557.1
CDS CCA 90 bp CCTCATTTTCCCCATGAGCACAATGGTGGCTTACTCACCGCCCGCTaGCTGGCTGCTAACTCGAAAGTGAACTTCTGCACACGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: PHFPHEHNGGLLTAR*LAANSKVNFCTRRC
Trigger: GCAGCGCCGTGTGCAGAAGTTCACTTTCGAGTTAGCAGCCAGCCAGCGGGCGGTGAGTAAGCCACCATTGTGCTCATGGGGAAAATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517861.1
ENST00000615557.1
CDS-3UTR CAA 90 bp TTCTTCAACTGTGAAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCGGCACGCTCAGCTTCTaGCCCAGGTCCAGCGTAGGG +
Preference number: 5 (lower is better)
Translates to: FFNCEVLSTSLGSGCYQAGTLSF*PRSSVG
Trigger: CCCTACGCTGGACCTGGGCAAGAAGCTGAGCGTGCC...GGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp GTCCACTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCAGGGACCCTCTGTTGTaGCGTAGTGACAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VHFPEIPSPSHPLHGLSRRDPLL*RSDSSS
Trigger: GGAGGAGCTGTCACTACGCAACAACAGAGGGTCCCT...GCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAGTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp TCTCACGCCTCCCACAAGGTCCCACTCAAATCCTTCAGGAAGCTTCCAGAATCCTCAGGGCCATTGGCATaGGCAACCGTCCCCGACTCC +
Preference number: 5 (lower is better)
Translates to: SHASHKVPLKSFRKLPESSGPLA*ATVPDS
Trigger: GGAGTCGGGGACGGTTGCCAATGCCAATGGCCCTGA...GGATTCTGGAAGCTTCCTGAAGGATTTGAGTGGGACCTTGTGGGAGGCGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp CCCGCCCACCATGTCCTGGAGAATATCCAAGATGTGCGGCACCTTCACTCTTCAGAGATGGCGGTGTGGTaGAACTTCTCTGGCGGGACG +
Preference number: 5 (lower is better)
Translates to: PAHHVLENIQDVRHLHSSEMAVW*NFSGGT
Trigger: CGTCCCGCCAGAGAAGTTCAACCACACCGCCATCTC...TGAAGAGTGAAGGTGCCGCACATCTTGGATATTCTCCAGGACATGGTGGGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523553.1
CDS-3UTR CAA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCTGCTGTCCACAAGTCTaGGCTCCGGATGTTACCAGG +
Preference number: 5 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPICCPQV*APDVTR
Trigger: CCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCA...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCCAGAGCGAGTGGGCATaGACCACCCAGTGCACTGAA +
Preference number: 5 (lower is better)
Translates to: FLASGITLLQYAPHTAPSQSEWA*TTQCTE
Trigger: TTCAGTGCACTGGGTGGTCAATGCCCACTCGCTCTG...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS TCA 90 bp GGAGGGAATCTTAGACCCTCAAGATTAACACCTCTGTCGGGAAGCTaGGAGTTGCGTGGCGTCCCTGTAGGCAGTCAGCGGTCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: GGNLRPSRLTPLSGS*ELRGVPVGSQRSAV
Trigger: GACTGCTGACCGCTGACTGCCTACAGGGACGCCACGCAACTCTCAGCTTCCCGACAGAGGTGTTAATCTTGAGGGTCTAAGATTCCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517768.6
CDS GCA 90 bp CACTGGGCTCTGGAGTCAGACAAACCCAGACCTGAATCCCGGCCCTaGCGGTGCTTCCTTGTTTTGTGGCTTTGGCCGGGTTGTTCATAT +
Preference number: 5 (lower is better)
Translates to: HWALESDKPRPESRP*RCFLVLWLWPGCSY
Trigger: ATATGAACAACCCGGCCAAAGCCACAAAACAAGGAAGCACCGGCAGGGCCGGGATTCAGGTCTGGGTTTGTCTGACTCCAGAGCCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS CCA 90 bp GCTGCTAACTCGAAAGTGAACTTCTGCACACGGCGCTGCCTCTTCTaGAAGAGGAGGGACCCTCTGTTGTTGCGTAGTGACAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AANSKVNFCTRRCLF*KRRDPLLLRSDSSS
Trigger: GGAGGAGCTGTCACTACGCAACAACAGAGGGTCCCTCCTCTTCCAGAAGAGGCAGCGCCGTGTGCAGAAGTTCACTTTCGAGTTAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000517861.1
ENST00000615557.1
CDS CCA 90 bp GTTCATCAAAGAGGTAGCACACAGCAGCCATGGAGAACAAGGCACTaGGCTCTGGAGTCAGACAAACCCAGACCTGAATCCCGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: VHQRGSTQQPWRTRH*ALESDKPRPESRPC
Trigger: GCAGGGCCGGGATTCAGGTCTGGGTTTGTCTGACTCCAGAGCCCAGTGCCTTGTTCTCCATGGCTGCTGTGTGCTACCTCTTTGATGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS-3UTR CAA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCAGGAGGGACCCTCTGTaGTTGCGTAGTGACAGCTCC +
Preference number: 5 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSRRDPL*LRSDSS
Trigger: GGAGCTGTCACTACGCAACAACAGAGGGTCCCTCCT...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp TTCCTGGCTTCTGGCATTACCCTTCTCCAATATGCGCCCCACACAGCACCCAGCTGCTGTCCACAAGTCTaGGCTCCGGATGTTACCAGG +
Preference number: 5 (lower is better)
Translates to: FLASGITLLQYAPHTAPSCCPQV*APDVTR
Trigger: CCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCA...GCTGGGTGCTGTGTGGGGCGCATATTGGAGAAGGGTAATGCCAGAAGCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp TCTCACGCCTCCCACAAGGTCCCACTCAAATCCTTCAGGAAGCTTCCAGAATCCGGCCCCTTCTGCTCCTaGGGGATCATCCTGGAAATG +
Preference number: 5 (lower is better)
Translates to: SHASHKVPLKSFRKLPESGPFCS*GIILEM
Trigger: CATTTCCAGGATGATCCCCAAGGAGCAGAAGGGGCC...GGATTCTGGAAGCTTCCTGAAGGATTTGAGTGGGACCTTGTGGGAGGCGTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297130.4
CDS-3UTR CAA 90 bp AGGCAGGAGCCTAATCTGATGGGAACATCACAGTCCTCAGCCTGGCTTACCGTTAGGAGGGACCCTCTGTaGTTGCGTAGTGACAGCTCC +
Preference number: 5 (lower is better)
Translates to: RQEPNLMGTSQSSAWLTVRRDPL*LRSDSS
Trigger: GGAGCTGTCACTACGCAACAACAGAGGGTCCCTCCT...AACGGTAAGCCAGGCTGAGGACTGTGATGTTCCCATCAGATTAGGCTCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR CAA 90 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCCCGAATCAGATTCCCATTaGGTGTCTGCCCCTGGACAA +
Preference number: 5 (lower is better)
Translates to: LSRNTLPLTPPSWTLTPPESDSH*VSAPGQ
Trigger: TTGTCCAGGGGCAGACACCAAATGGGAATCTGATTC...GGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp TTCTTCAACTGTGAAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCAGGAGGGACCCTCTGTaGTTGCGTAGTGACAGCTCC +
Preference number: 5 (lower is better)
Translates to: FFNCEVLSTSLGSGCYQARRDPL*LRSDSS
Trigger: GGAGCTGTCACTACGCAACAACAGAGGGTCCCTCCT...GGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACCAGGCCATTGGGCCCTaGGGACCCAGAAGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYQAIGP*GPRRGV
Trigger: CACTCCCCTTCTGGGTCCCAAGGGCCCAATGGCCTG...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCTTGGGACGACTGAACTaGGTGACCTCTGAAGCCATT +
Preference number: 5 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSLGRLN*VTSEAI
Trigger: AATGGCTTCAGAGGTCACCAAGTTCAGTCGTCCCAA...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCGTCCTCATCTTACACTaGGAGAAACAGAGGCTCGGA +
Preference number: 5 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSVLILH*EKQRLG
Trigger: TCCGAGCCTCTGTTTCTCCAAGTGTAAGATGAGGAC...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGAGGGACCCTCTGTTGTaGCGTAGTGACAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQRDPLL*RSDSSS
Trigger: GGAGGAGCTGTCACTACGCAACAACAGAGGGTCCCT...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp TCTCACGCCTCCCACAAGGTCCCACTCAAATCCTTCAGGAAGCTTCCAGAATCCGTCCTCATCTTACACTaGGAGAAACAGAGGCTCGGA +
Preference number: 5 (lower is better)
Translates to: SHASHKVPLKSFRKLPESVLILH*EKQRLG
Trigger: TCCGAGCCTCTGTTTCTCCAAGTGTAAGATGAGGAC...GGATTCTGGAAGCTTCCTGAAGGATTTGAGTGGGACCTTGTGGGAGGCGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp AAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCCCCGAGACTGGGGAAGGAGGTTTTATACTaGTCCTCATCTTACACTTGG +
Preference number: 5 (lower is better)
Translates to: KCCPQVLAPDVTRPPRLGKEVLY*SSSYTW
Trigger: CCAAGTGTAAGATGAGGACAAGTATAAAACCTCCTT...CCCCAGTCTCGGGGGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp AGTGAGCACCCTGTCACCGGGGGAGTGTACACTACAGGAACAGGAAAGAGCAGAGACACCCGGCCCTGGTaGCTATTAATAATACAGATT +
Preference number: 5 (lower is better)
Translates to: SEHPVTGGVYTTGTGKSRDTRPW*LLIIQI
Trigger: AATCTGTATTATTAATAGCAACCAGGGCCGGGTGTC...TCTGCTCTTTCCTGTTCCTGTAGTGTACACTCCCCCGGTGACAGGGTGCTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp TTCTTCAACTGTGAAGTGCTGTCCACAAGTCTTGGCTCCGGATGTTACCAGGCCGAATCAGATTCCCATTaGGTGTCTGCCCCTGGACAA +
Preference number: 5 (lower is better)
Translates to: FFNCEVLSTSLGSGCYQAESDSH*VSAPGQ
Trigger: TTGTCCAGGGGCAGACACCAAATGGGAATCTGATTC...GGCCTGGTAACATCCGGAGCCAAGACTTGTGGACAGCACTTCACAGTTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp CTTTCCAGAAATACCCTCCCCCTCACACCCCCTTCATGGACTCTCACGCCTCCCAAGGAGGTTTTATACTaGTCCTCATCTTACACTTGG +
Preference number: 5 (lower is better)
Translates to: LSRNTLPLTPPSWTLTPPKEVLY*SSSYTW
Trigger: CCAAGTGTAAGATGAGGACAAGTATAAAACCTCCTT...GGGAGGCGTGAGAGTCCATGAAGGGGGTGTGAGGGGGAGGGTATTTCTGGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS CCA 90 bp GACACAAATCTAGATGTTCATCAAAGAGGTAGCACACAGCAGCCATaGAGAACAAGGCACTGGGCTCTGGAGTCAGACAAACCCAGACCT +
Preference number: 5 (lower is better)
Translates to: DTNLDVHQRGSTQQP*RTRHWALESDKPRP
Trigger: AGGTCTGGGTTTGTCTGACTCCAGAGCCCAGTGCCTTGTTCTCCATGGCTGCTGTGTGCTACCTCTTTGATGAACATCTAGATTTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS-3UTR CAA 90 bp CAATCGCTATCCCACACACCCTGGGAATGGGCTGGACTCCTGACCTTCCCCATCCCTCAATATCTTTGCTaGACTTATCCTTTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: QSLSHTPWEWAGLLTFPIPQYLC*TYPFLP
Trigger: AGGAAGAAAAGGATAAGTCAAGCAAAGATATTGAGG...GATGGGGAAGGTCAGGAGTCCAGCCCATTCCCAGGGTGTGTGGGATAGCGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297130.4
CDS-3UTR CAA 90 bp CCACGGCTTATCCTCAACCCCCTAATCCACTTTGTTTACTTTGTTCTGTATCCAAGGGACCCTCTGTTGTaGCGTAGTGACAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PRLILNPLIHFVYFVLYPRDPLL*RSDSSS
Trigger: GGAGGAGCTGTCACTACGCAACAACAGAGGGTCCCT...TGGATACAGAACAAAGTAAACAAAGTGGATTAGGGGGTTGAGGATAAGCCGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR CAA 90 bp CCCACCAGGCTCCTTTTCATACCTGGTGGCTGCAGTTACTTTCCAGAGCACAGCAGATGGATGAATGAATaGCTCCTCAATATCTTTGCT +
Preference number: 5 (lower is better)
Translates to: PTRLLFIPGGCSYFPEHSRWMNE*LLNIFA
Trigger: AGCAAAGATATTGAGGAGCAATTCATTCATCCATCT...GCTGTGCTCTGGAAAGTAACTGCAGCCACCAGGTATGAAAAGGAGCCTGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297130.4
CDS-3UTR CAA 90 bp CCTTCTCCCTTCTGCAGAACACCCTGCACCCGTGCTCAGTTCCATATTTTTGCAATTTGCAATCAGGTTTaGTGTGTGAAGGCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: PSPFCRTPCTRAQFHIFAICNQV*CVKALL
Trigger: AAGAAGGGCCTTCACACACAAAACCTGATTGCAAAT...TGCAAAAATATGGAACTGAGCACGGGTGCAGGGTGTTCTGCAGAAGGGAGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGGACACCCGGCCCTGGTaGCTATTAATAATACAGATT +
Preference number: 5 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQDTRPW*LLIIQI
Trigger: AATCTGTATTATTAATAGCAACCAGGGCCGGGTGTC...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGGAACTCAGCAGATATTaGTCGAAGGAAGGAATGGAT +
Preference number: 5 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQELSRY*SKEGMD
Trigger: ATCCATTCCTTCCTTCGACAAATATCTGCTGAGTTC...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297130.4
CDS-3UTR CAA 90 bp CACATTCTCAGAAGAAGAAAGGATTTGTTTTGGGTGCAGTGGTCTCCCCACCAGCATCCCCAGGTAATTTaGAAACACACCCATGTTTTG +
Preference number: 5 (lower is better)
Translates to: HILRRRKDLFWVQWSPHQHPQVI*KHTHVL
Trigger: CAAAACATGGGTGTGTTTCAAAATTACCTGGGGATG...CTGGTGGGGAGACCACTGCACCCAAAACAAATCCTTTCTTCTTCTGAGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS GCA 90 bp TTCCGAAGTTCTTTGGCCATTTGTGTTTATTGCATGAATTCCCCATaGAGGTCTTTGCCCATAATGGTGGAGGTAGTGAGAAATGGTCAG +
Preference number: 5 (lower is better)
Translates to: FRSSLAICVYCMNSP*RSLPIMVEVVRNGQ
Trigger: CTGACCATTTCTCACTACCTCCACCATTATGGGCAAAGACCTGCATGGGGAATTCATGCAATAAACACAAATGGCCAAAGAACTTCGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR CAA 90 bp ATCCAGTGCAAGAACAACTTTTCCAGCCTAGAGCAGCAGTTGCATGAAACCTACCTACTTTTCAGATTCTaGAATGGCTGGTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: IQCKNNFSSLEQQLHETYLLFRF*NGWSSA
Trigger: AGCTGAAGACCAGCCATTCAAGAATCTGAAAAGTAG...GTAGGTTTCATGCAACTGCTGCTCTAGGCTGGAAAAGTTGTTCTTGCACTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS-3UTR CAA 90 bp CGGCTTATCCTCAACCCCCTAATCCACTTTGTTTACTTTGTTCTGTATCCAGGGTGTTTCCGAAGTTCTTaGGCCATTTGTGTTTATTGC +
Preference number: 5 (lower is better)
Translates to: RLILNPLIHFVYFVLYPGCFRSS*AICVYC
Trigger: GCAATAAACACAAATGGCCAAAGAACTTCGGAAACA...CCCTGGATACAGAACAAAGTAAACAAAGTGGATTAGGGGGTTGAGGATAAGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR CAA 90 bp GCTTATCCTCAACCCCCTAATCCACTTTGTTTACTTTGTTCTGTATCCAGGGAGCTCACGGCCTGTAACTaGTTTTATCAAGATCTTTAC +
Preference number: 5 (lower is better)
Translates to: AYPQPPNPLCLLCSVSRELTACN*FYQDLY
Trigger: GTAAAGATCTTGATAAAACAAGTTACAGGCCGTGAG...CTCCCTGGATACAGAACAAAGTAAACAAAGTGGATTAGGGGGTTGAGGATAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR CAA 90 bp TTGTTTACTTTGTTCTGTATCCAGGGAGAGATGCCTAAAAAGATAACACTTTTCGGCCATTTGTGTTTATaGCATGAATTCCCCATGCAG +
Preference number: 5 (lower is better)
Translates to: LFTLFCIQGEMPKKITLFGHLCL*HEFPMQ
Trigger: CTGCATGGGGAATTCATGCAATAAACACAAATGGCC...GAAAAGTGTTATCTTTTTAGGCATCTCTCCCTGGATACAGAACAAAGTAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS-3UTR CAA 90 bp TTGTTTACTTTGTTCTGTATCCAGGGAGAGATGCCTAAAAAGATAACACTTTTCACCTCAGAGTTTAATTaGCATGTGTTTGTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: LFTLFCIQGEMPKKITLFTSEFN*HVFVAQ
Trigger: CTGAGCAACAAACACATGCAAATTAAACTCTGAGGT...GAAAAGTGTTATCTTTTTAGGCATCTCTCCCTGGATACAGAACAAAGTAAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS CCA 72 bp GCGGCTCCGCATAGCCTGGCGCCAGGGCGCTGGGGCTaGGGACGCACCCAGCAGGGGCGGCTGCAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: AAPHSLAPGRWG*GRTQQGRLQGG
Trigger: CCCACCCTGCAGCCGCCCCTGCTGGGTGCGTCCCCAGCCCCAGCGCCCTGGCGCCAGGCTATGCGGAGCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000521300.1
ENST00000523553.1
ENST00000524256.1
CDS CCA 72 bp CCTTCAGCGGCTCCGCATAGCCTGGCGCCAGGGCGCTaGGGCTGGGGACGCACCCAGCAGGGGCGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: PSAAPHSLAPGR*GWGRTQQGRLQ
Trigger: CTGCAGCCGCCCCTGCTGGGTGCGTCCCCAGCCCCAGCGCCCTGGCGCCAGGCTATGCGGAGCCGCTGAAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000521300.1
ENST00000523553.1
ENST00000524256.1
CDS CAA 90 bp TGCAGTGAGGAAGCCACGAGTTCGCAGCGCGGGTTGGTCTTGGCCTaGGCTGACTCGCTGTGTGACCTGGGGCGCGGCGCCCCTCCGGCT +
Preference number: 6 (lower is better)
Translates to: CSEEATSSQRGLVLA*ADSLCDLGRGAPPA
Trigger: AGCCGGAGGGGCGCCGCGCCCCAGGTCACACAGCGAGTCAGCCAAGGCCAAGACCAACCCGCGCTGCGAACTCGTGGCTTCCTCACTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520112.1
CDS CCA 72 bp AAGCCACGAGTTCGCAGCGCGGGTTGGTCTTGGCCTTaGCTGACTCGCTGTGTGACCTGGGGCGCGGCGCCC +
Preference number: 6 (lower is better)
Translates to: KPRVRSAGWSWP*LTRCVTWGAAP
Trigger: GGGCGCCGCGCCCCAGGTCACACAGCGAGTCAGCCAAGGCCAAGACCAACCCGCGCTGCGAACTCGTGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520112.1
CDS CAA 72 bp GAAGCCACGAGTTCGCAGCGCGGGTTGGTCTTGGCCTaGGCTGACTCGCTGTGTGACCTGGGGCGCGGCGCC +
Preference number: 6 (lower is better)
Translates to: EATSSQRGLVLA*ADSLCDLGRGA
Trigger: GGCGCCGCGCCCCAGGTCACACAGCGAGTCAGCCAAGGCCAAGACCAACCCGCGCTGCGAACTCGTGGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520112.1
CDS CAA 90 bp GAGGACTGCAGTGAGGAAGCCACGAGTTCGCAGCGCGGGTTGGTCTaGGCCTTGGCTGACTCGCTGTGTGACCTGGGGCGCGGCGCCCCT +
Preference number: 6 (lower is better)
Translates to: EDCSEEATSSQRGLV*ALADSLCDLGRGAP
Trigger: AGGGGCGCCGCGCCCCAGGTCACACAGCGAGTCAGCCAAGGCCAAGACCAACCCGCGCTGCGAACTCGTGGCTTCCTCACTGCAGTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520112.1
CDS CCA 72 bp CCGAGCGGTAGTTCGGCCCCTCAGGGCCATTGGCATTaGCAACCTGGGCACAGGGGCGGGTTCTCAGAGGCC +
Preference number: 6 (lower is better)
Translates to: PSGSSAPQGHWH*QPGHRGGFSEA
Trigger: GGCCTCTGAGAACCCGCCCCTGTGCCCAGGTTGCCAATGCCAATGGCCCTGAGGGGCCGAACTACCGCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521300.1
CDS CCA 72 bp GGAGCTCCGAGCGGTAGTTCGGCCCCTCAGGGCCATTaGCATTGGCAACCTGGGCACAGGGGCGGGTTCTCA +
Preference number: 6 (lower is better)
Translates to: GAPSGSSAPQGH*HWQPGHRGGFS
Trigger: TGAGAACCCGCCCCTGTGCCCAGGTTGCCAATGCCAATGGCCCTGAGGGGCCGAACTACCGCTCGGAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521300.1
CDS CAA 90 bp AACACGGAGGACTGCAGTGAGGAAGCCACGAGTTCGCAGCGCGGGTaGGTCTTGGCCTTGGCTGACTCGCTGTGTGACCTGGGGCGCGGC +
Preference number: 6 (lower is better)
Translates to: NTEDCSEEATSSQRG*VLALADSLCDLGRG
Trigger: GCCGCGCCCCAGGTCACACAGCGAGTCAGCCAAGGCCAAGACCAACCCGCGCTGCGAACTCGTGGCTTCCTCACTGCAGTCCTCCGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520112.1
CDS TCA 72 bp AAGGGCAGCGGTAGCCCTTGGAGATGGCGGTGTGGTTaGACTTCTCTGGCGGGACGCCCTTCAGCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: KGSGSPWRWRCG*TSLAGRPSAAP
Trigger: CGGAGCCGCTGAAGGGCGTCCCGCCAGAGAAGTTCAACCACACCGCCATCTCCAAGGGCTACCGCTGCCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000520112.1
ENST00000521300.1
ENST00000523553.1
ENST00000524256.1
CDS GCA 72 bp CACGCTCAGCTTCTTGCCCAGGTCCAGCGTAGGGACTaGCAGGAAAGGCCAGAGCGGGCTCTCACCACCCCA +
Preference number: 6 (lower is better)
Translates to: HAQLLAQVQRRD*QERPERALTTP
Trigger: TGGGGTGGTGAGAGCCCGCTCTGGCCTTTCCTGGCAGTCCCTACGCTGGACCTGGGCAAGAAGCTGAGCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS CAA 72 bp AGTGAGGAAGCCACGAGTTCGCAGCGCGGGTTGGTCTaGGCCTTGGCTGACTCGCTGTGTGACCTGGGGCGC +
Preference number: 6 (lower is better)
Translates to: SEEATSSQRGLV*ALADSLCDLGR
Trigger: GCGCCCCAGGTCACACAGCGAGTCAGCCAAGGCCAAGACCAACCCGCGCTGCGAACTCGTGGCTTCCTCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520112.1
CDS CCA 72 bp GTAGCCCTTGGAGATGGCGGTGTGGTTGAACTTCTCTaGCGGGACGCCCTTCAGCGGCTCCGCATAGCCTGG +
Preference number: 6 (lower is better)
Translates to: VALGDGGVVELL*RDALQRLRIAW
Trigger: CCAGGCTATGCGGAGCCGCTGAAGGGCGTCCCGCCAGAGAAGTTCAACCACACCGCCATCTCCAAGGGCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000521300.1
ENST00000523553.1
ENST00000524256.1
CDS CCA 72 bp AGCTCCTCGGACTCTGGGAGGTTACGGACCCAGCCCTaGGCCACTCTGTTGAAGCTGGGTCTGAGACGGAGG +
Preference number: 6 (lower is better)
Translates to: SSSDSGRLRTQP*ATLLKLGLRRR
Trigger: CCTCCGTCTCAGACCCAGCTTCAACAGAGTGGCCCAGGGCTGGGTCCGTAACCTCCCAGAGTCCGAGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297130.4
ENST00000456566.2
ENST00000517768.6
ENST00000521300.1
CDS CAA 90 bp AGTGACAGCTCCTCCATCATCAGGTCCTGGGGCACGCTCAGCTTCTaGCCCAGGTCCAGCGTAGGGACTGCCAGGAAAGGCCAGAGCGGG +
Preference number: 6 (lower is better)
Translates to: SDSSSIIRSWGTLSF*PRSSVGTARKGQSG
Trigger: CCCGCTCTGGCCTTTCCTGGCAGTCCCTACGCTGGACCTGGGCAAGAAGCTGAGCGTGCCCCAGGACCTGATGATGGAGGAGCTGTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS TCA 72 bp TGTGACTTCGGCCATCGCTCTGGTAGTCCCGGTAGCTaGCGAACTCCTGCCAAGGGCAGCGGTAGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: CDFGHRSGSPGS*RTPAKGSGSPW
Trigger: CCAAGGGCTACCGCTGCCCTTGGCAGGAGTTCGTCAGCTACCGGGACTACCAGAGCGATGGCCGAAGTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000520112.1
ENST00000521300.1
ENST00000523553.1
CDS CCA 72 bp ACTGCAGTGAGGAAGCCACGAGTTCGCAGCGCGGGTTaGTCTTGGCCTTGGCTGACTCGCTGTGTGACCTGG +
Preference number: 6 (lower is better)
Translates to: TAVRKPRVRSAG*SWPWLTRCVTW
Trigger: CCAGGTCACACAGCGAGTCAGCCAAGGCCAAGACCAACCCGCGCTGCGAACTCGTGGCTTCCTCACTGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520112.1
CDS CAA 72 bp GACTGCAGTGAGGAAGCCACGAGTTCGCAGCGCGGGTaGGTCTTGGCCTTGGCTGACTCGCTGTGTGACCTG +
Preference number: 6 (lower is better)
Translates to: DCSEEATSSQRG*VLALADSLCDL
Trigger: CAGGTCACACAGCGAGTCAGCCAAGGCCAAGACCAACCCGCGCTGCGAACTCGTGGCTTCCTCACTGCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520112.1
CDS CAA 72 bp TCCTCCATCATCAGGTCCTGGGGCACGCTCAGCTTCTaGCCCAGGTCCAGCGTAGGGACTGCCAGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: SSIIRSWGTLSF*PRSSVGTARKG
Trigger: GCCTTTCCTGGCAGTCCCTACGCTGGACCTGGGCAAGAAGCTGAGCGTGCCCCAGGACCTGATGATGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS CAA 90 bp AGTGACAGCTCCTCCATCATCAGGTCCTGGGGCACGCTCAGCTTCTaGCCCAGGTCCAGCGTAGGGACTGGTTCAGTGAGGTCCCCCATG +
Preference number: 6 (lower is better)
Translates to: SDSSSIIRSWGTLSF*PRSSVGTGSVRSPM
Trigger: CATGGGGGACCTCACTGAACCAGTCCCTACGCTGGACCTGGGCAAGAAGCTGAGCGTGCCCCAGGACCTGATGATGGAGGAGCTGTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000517861.1
CDS CAA 90 bp TGCACACGGCGCTGCCTCTTCTGGAAGAGGAGGGACCCTCTGTTGTaGCGTAGTGACAGCTCCTCCATCATCAGGTCCTGGGGCACGCTC +
Preference number: 6 (lower is better)
Translates to: CTRRCLFWKRRDPLL*RSDSSSIIRSWGTL
Trigger: GAGCGTGCCCCAGGACCTGATGATGGAGGAGCTGTCACTACGCAACAACAGAGGGTCCCTCCTCTTCCAGAAGAGGCAGCGCCGTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000517861.1
ENST00000615557.1
CDS TCA 72 bp GCTCCGGATGTTACCAGGCCCCCGAGACTGGGGAACTaGAGATTCAGGCTAGGGCTACAGCTCCTCGGACTC +
Preference number: 6 (lower is better)
Translates to: APDVTRPPRLGN*RFRLGLQLLGL
Trigger: GAGTCCGAGGAGCTGTAGCCCTAGCCTGAATCTTCAGTTCCCCAGTCTCGGGGGCCTGGTAACATCCGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297130.4
ENST00000456566.2
ENST00000517768.6
ENST00000521300.1
CDS GCA 72 bp GCCCGCTGGCTGGCTGCTAACTCGAAAGTGAACTTCTaGACACGGCGCTGCCTCTTCTGGAAGAGGAGGGAC +
Preference number: 6 (lower is better)
Translates to: ARWLAANSKVNF*TRRCLFWKRRD
Trigger: GTCCCTCCTCTTCCAGAAGAGGCAGCGCCGTGTGCAGAAGTTCACTTTCGAGTTAGCAGCCAGCCAGCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000517861.1
ENST00000615557.1
CDS CAA 72 bp TCCTCCATCATCAGGTCCTGGGGCACGCTCAGCTTCTaGCCCAGGTCCAGCGTAGGGACTGGTTCAGTGAGG +
Preference number: 6 (lower is better)
Translates to: SSIIRSWGTLSF*PRSSVGTGSVR
Trigger: CCTCACTGAACCAGTCCCTACGCTGGACCTGGGCAAGAAGCTGAGCGTGCCCCAGGACCTGATGATGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000517861.1
CDS CAA 90 bp TTCTGCACACGGCGCTGCCTCTTCTGGAAGAGGAGGGACCCTCTGTaGTTGCGTAGTGACAGCTCCTCCATCATCAGGTCCTGGGGCACG +
Preference number: 6 (lower is better)
Translates to: FCTRRCLFWKRRDPL*LRSDSSSIIRSWGT
Trigger: CGTGCCCCAGGACCTGATGATGGAGGAGCTGTCACTACGCAACAACAGAGGGTCCCTCCTCTTCCAGAAGAGGCAGCGCCGTGTGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000517861.1
ENST00000615557.1
CDS TCA 72 bp CCAGCATCGCCCGCTGGCTGGCTGCTAACTCGAAAGTaGACTTCTGCACACGGCGCTGCCTCTTCTGGAAGA +
Preference number: 6 (lower is better)
Translates to: PASPAGWLLTRK*TSAHGAASSGR
Trigger: TCTTCCAGAAGAGGCAGCGCCGTGTGCAGAAGTTCACTTTCGAGTTAGCAGCCAGCCAGCGGGCGATGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297130.4
ENST00000517768.6
CDS GCA 72 bp CTGGAGTCAGACAAACCCAGACCTGAATCCCGGCCCTaGCGGTGCTTCCTTGTTTTGTGGCTTTGGCCGGGT +
Preference number: 6 (lower is better)
Translates to: LESDKPRPESRP*RCFLVLWLWPG
Trigger: ACCCGGCCAAAGCCACAAAACAAGGAAGCACCGGCAGGGCCGGGATTCAGGTCTGGGTTTGTCTGACTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS GCA 72 bp GCGCTGTGGCCCTCACTCTGGCGTCCAATGTTTCACTaGCACTCTCCACTTTGGGGCAGCCTCAAAGCTACC +
Preference number: 6 (lower is better)
Translates to: ALWPSLWRPMFH*HSPLWGSLKAT
Trigger: GGTAGCTTTGAGGCTGCCCCAAAGTGGAGAGTGGCAGTGAAACATTGGACGCCAGAGTGAGGGCCACAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS CCA 72 bp GCACACAGCAGCCATGGAGAACAAGGCACTGGGCTCTaGAGTCAGACAAACCCAGACCTGAATCCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: AHSSHGEQGTGL*SQTNPDLNPGP
Trigger: AGGGCCGGGATTCAGGTCTGGGTTTGTCTGACTCCAGAGCCCAGTGCCTTGTTCTCCATGGCTGCTGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS CCA 72 bp ACACGGGCAGGCCTGGGGTCTGCATTCAAGTCCACGTaGAGGCCTCACGCTCTAAACCCATATAGGCCACTG +
Preference number: 6 (lower is better)
Translates to: TRAGLGSAFKST*RPHALNPYRPL
Trigger: CAGTGGCCTATATGGGTTTAGAGCGTGAGGCCTCCACGTGGACTTGAATGCAGACCCCAGGCCTGCCCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS CCA 72 bp CCAGTCACCTTCCTCCTGGCGCTTCCGGCCAGCATCTaGGAACGAGGGGGTAGAATAAACCGCAGAGAAGCT +
Preference number: 6 (lower is better)
Translates to: PVTFLLALPASI*ERGGRINRREA
Trigger: AGCTTCTCTGCGGTTTATTCTACCCCCTCGTTCCCAGATGCTGGCCGGAAGCGCCAGGAGGAAGGTGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524256.1
CDS GCA 72 bp GGTCAGCAGTCAGTAGGCAGCGAGCAGGGTGTCCCCTaGAGCCAGCTCTGGCTTCAGCTGATGAGAATCATT +
Preference number: 6 (lower is better)
Translates to: GQQSVGSEQGVP*SQLWLQLMRII
Trigger: AATGATTCTCATCAGCTGAAGCCAGAGCTGGCTGCAGGGGACACCCTGCTCGCTGCCTACTGACTGCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517768.6
CDS CCA 72 bp TTGTTGCGTAGTGACAGCTCCTCCATCATCAGGTCCTaGGGCACGCTCAGCTTCTTGCCCAGGTCCAGCGTA +
Preference number: 6 (lower is better)
Translates to: LLRSDSSSIIRS*GTLSFLPRSSV
Trigger: TACGCTGGACCTGGGCAAGAAGCTGAGCGTGCCCCAGGACCTGATGATGGAGGAGCTGTCACTACGCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000517861.1
ENST00000615557.1
CDS CAA 90 bp AGTCAGACAAACCCAGACCTGAATCCCGGCCCTGCCGGTGCTTCCTaGTTTTGTGGCTTTGGCCGGGTTGTTCATATTCCTGAGCCGCAG +
Preference number: 6 (lower is better)
Translates to: SQTNPDLNPGPAGAS*FCGFGRVVHIPEPQ
Trigger: CTGCGGCTCAGGAATATGAACAACCCGGCCAAAGCCACAAAACAAGGAAGCACCGGCAGGGCCGGGATTCAGGTCTGGGTTTGTCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS TCA 72 bp CTTAGACCCTCAAGATTAACACCTCTGTCGGGAAGCTaGGAGTTGCGTGGCGTCCCTGTAGGCAGTCAGCGG +
Preference number: 6 (lower is better)
Translates to: LRPSRLTPLSGS*ELRGVPVGSQR
Trigger: CCGCTGACTGCCTACAGGGACGCCACGCAACTCTCAGCTTCCCGACAGAGGTGTTAATCTTGAGGGTCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517768.6
CDS TCA 72 bp CTAACCAGTGGCTCTCTGTGGTCCTCATTTTCCCCATaGGCACAATGGTGGCTTACTCACCGCCCGCTGGCT +
Preference number: 6 (lower is better)
Translates to: LTSGSLWSSFSP*AQWWLTHRPLA
Trigger: AGCCAGCGGGCGGTGAGTAAGCCACCATTGTGCTCATGGGGAAAATGAGGACCACAGAGAGCCACTGGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517861.1
ENST00000615557.1
CDS GCA 72 bp TCAGACAAACCCAGACCTGAATCCCGGCCCTGCCGGTaGTTCCTTGTTTTGTGGCTTTGGCCGGGTTGTTCA +
Preference number: 6 (lower is better)
Translates to: SDKPRPESRPCR*FLVLWLWPGCS
Trigger: TGAACAACCCGGCCAAAGCCACAAAACAAGGAAGCACCGGCAGGGCCGGGATTCAGGTCTGGGTTTGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS CCA 72 bp AAGATTAACACCTCTGTCGGGAAGCTGAGAGTTGCGTaGCGTCCCTGTAGGCAGTCAGCGGTCAGCAGTCAG +
Preference number: 6 (lower is better)
Translates to: KINTSVGKLRVA*RPCRQSAVSSQ
Trigger: CTGACTGCTGACCGCTGACTGCCTACAGGGACGCCACGCAACTCTCAGCTTCCCGACAGAGGTGTTAATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517768.6
CDS CCA 72 bp CCCCATGAGCACAATGGTGGCTTACTCACCGCCCGCTaGCTGGCTGCTAACTCGAAAGTGAACTTCTGCACA +
Preference number: 6 (lower is better)
Translates to: PHEHNGGLLTAR*LAANSKVNFCT
Trigger: TGTGCAGAAGTTCACTTTCGAGTTAGCAGCCAGCCAGCGGGCGGTGAGTAAGCCACCATTGTGCTCATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517861.1
ENST00000615557.1
CDS GCA 72 bp GCTGCTAACTCGAAAGTGAACTTCTGCACACGGCGCTaGCTCTTCTGGAAGAGGAGGGACCCTCTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: AANSKVNFCTRR*LFWKRRDPLLL
Trigger: CAACAACAGAGGGTCCCTCCTCTTCCAGAAGAGGCAGCGCCGTGTGCAGAAGTTCACTTTCGAGTTAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000517861.1
ENST00000615557.1
CDS CCA 72 bp TCGAAAGTGAACTTCTGCACACGGCGCTGCCTCTTCTaGAAGAGGAGGGACCCTCTGTTGTTGCGTAGTGAC +
Preference number: 6 (lower is better)
Translates to: SKVNFCTRRCLF*KRRDPLLLRSD
Trigger: GTCACTACGCAACAACAGAGGGTCCCTCCTCTTCCAGAAGAGGCAGCGCCGTGTGCAGAAGTTCACTTTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297130.4
ENST00000517768.6
ENST00000517861.1
ENST00000615557.1
CDS CCA 72 bp AGAGGTAGCACACAGCAGCCATGGAGAACAAGGCACTaGGCTCTGGAGTCAGACAAACCCAGACCTGAATCC +
Preference number: 6 (lower is better)
Translates to: RGSTQQPWRTRH*ALESDKPRPES
Trigger: GGATTCAGGTCTGGGTTTGTCTGACTCCAGAGCCCAGTGCCTTGTTCTCCATGGCTGCTGTGTGCTACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS CAA 72 bp AACCCAGACCTGAATCCCGGCCCTGCCGGTGCTTCCTaGTTTTGTGGCTTTGGCCGGGTTGTTCATATTCCT +
Preference number: 6 (lower is better)
Translates to: NPDLNPGPAGAS*FCGFGRVVHIP
Trigger: AGGAATATGAACAACCCGGCCAAAGCCACAAAACAAGGAAGCACCGGCAGGGCCGGGATTCAGGTCTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS CCA 72 bp ATCCCCCATACACTCCAGGCCCCACCTCTCGAAGCATaGCATGCTGTGTGTAAGAATGCCTGTTTCTCACCA +
Preference number: 6 (lower is better)
Translates to: IPHTLQAPPLEA*HAVCKNACFSP
Trigger: TGGTGAGAAACAGGCATTCTTACACACAGCATGCCATGCTTCGAGAGGTGGGGCCTGGAGTGTATGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS CAA 72 bp ACTCTGGCGTCCAATGTTTCACTGCCACTCTCCACTTaGGGGCAGCCTCAAAGCTACCTTGTTGGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: TLASNVSLPLST*GQPQSYLVGLF
Trigger: GAAGAGGCCAACAAGGTAGCTTTGAGGCTGCCCCAAAGTGGAGAGTGGCAGTGAAACATTGGACGCCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS GCA 72 bp GGGTTGTTCATATTCCTGAGCCGCAGCCTCTTCATCTaGAGAACAGGAAAACTCATAGCACCCGCCCACCAT +
Preference number: 6 (lower is better)
Translates to: GLFIFLSRSLFI*RTGKLIAPAHH
Trigger: ATGGTGGGCGGGTGCTATGAGTTTTCCTGTTCTGCAGATGAAGAGGCTGCGGCTCAGGAATATGAACAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS CAA 72 bp AGCCTCAAAGCTACCTTGTTGGCCTCTTCTAGGCCATaGGTGAAAGGAAAAGCTGAGCTGGCCTCGAACTGC +
Preference number: 6 (lower is better)
Translates to: SLKATLLASSRP*VKGKAELASNC
Trigger: GCAGTTCGAGGCCAGCTCAGCTTTTCCTTTCACCAATGGCCTAGAAGAGGCCAACAAGGTAGCTTTGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS CAA 90 bp ATGTTTCACTGCCACTCTCCACTTTGGGGCAGCCTCAAAGCTACCTaGTTGGCCTCTTCTAGGCCATTGGTGAAAGGAAAAGCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: MFHCHSPLWGSLKAT*LASSRPLVKGKAEL
Trigger: CAGCTCAGCTTTTCCTTTCACCAATGGCCTAGAAGAGGCCAACAAGGTAGCTTTGAGGCTGCCCCAAAGTGGAGAGTGGCAGTGAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS CAA 72 bp TGCCACTCTCCACTTTGGGGCAGCCTCAAAGCTACCTaGTTGGCCTCTTCTAGGCCATTGGTGAAAGGAAAA +
Preference number: 6 (lower is better)
Translates to: CHSPLWGSLKAT*LASSRPLVKGK
Trigger: TTTTCCTTTCACCAATGGCCTAGAAGAGGCCAACAAGGTAGCTTTGAGGCTGCCCCAAAGTGGAGAGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS TCA 72 bp CTTGTTTTGTGGCTTTGGCCGGGTTGTTCATATTCCTaGGCCGCAGCCTCTTCATCTGCAGAACAGGAAAAC +
Preference number: 6 (lower is better)
Translates to: LVLWLWPGCSYS*AAASSSAEQEN
Trigger: GTTTTCCTGTTCTGCAGATGAAGAGGCTGCGGCTCAGGAATATGAACAACCCGGCCAAAGCCACAAAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS CCA 72 bp CTAGATGTTCATCAAAGAGGTAGCACACAGCAGCCATaGAGAACAAGGCACTGGGCTCTGGAGTCAGACAAA +
Preference number: 6 (lower is better)
Translates to: LDVHQRGSTQQP*RTRHWALESDK
Trigger: TTTGTCTGACTCCAGAGCCCAGTGCCTTGTTCTCCATGGCTGCTGTGTGCTACCTCTTTGATGAACATCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS CCA 72 bp AAGGAAAAGCTGAGCTGGCCTCGAACTGCTGAAATCTaGGGACCCCTCAGAGAAGGACACAAATCTAGATGT +
Preference number: 6 (lower is better)
Translates to: KEKLSWPRTAEI*GPLREGHKSRC
Trigger: ACATCTAGATTTGTGTCCTTCTCTGAGGGGTCCCCAGATTTCAGCAGTTCGAGGCCAGCTCAGCTTTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS TCA 72 bp CCTATGGCTTCTCGTGTCATCTCCATAGCAACTTTATaGAGCAGGTACTATAAACCCCTCATTTTACAGGTG +
Preference number: 6 (lower is better)
Translates to: PMASRVISIATL*SRYYKPLILQV
Trigger: CACCTGTAAAATGAGGGGTTTATAGTACCTGCTTCATAAAGTTGCTATGGAGATGACACGAGAAGCCATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456566.2
CDS GCA 72 bp CACTGTTTCCGAAGTTCTTTGGCCATTTGTGTTTATTaGATGAATTCCCCATGCAGGTCTTTGCCCATAATG +
Preference number: 6 (lower is better)
Translates to: HCFRSSLAICVY*MNSPCRSLPIM
Trigger: CATTATGGGCAAAGACCTGCATGGGGAATTCATGCAATAAACACAAATGGCCAAAGAACTTCGGAAACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS CAA 72 bp ATTTGTGTTTATTGCATGAATTCCCCATGCAGGTCTTaGCCCATAATGGTGGAGGTAGTGAGAAATGGTCAG +
Preference number: 6 (lower is better)
Translates to: ICVYCMNSPCRS*PIMVEVVRNGQ
Trigger: CTGACCATTTCTCACTACCTCCACCATTATGGGCAAAGACCTGCATGGGGAATTCATGCAATAAACACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615557.1
CDS CAA 72 bp GCACTGTTTCCGAAGTTCTTTGGCCATTTGTGTTTATaGCATGAATTCCCCATGCAGGTCTTTGCCCATAAT +
Preference number: 6 (lower is better)
Translates to: ALFPKFFGHLCL*HEFPMQVFAHN
Trigger: ATTATGGGCAAAGACCTGCATGGGGAATTCATGCAATAAACACAAATGGCCAAAGAACTTCGGAAACAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615557.1