RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000160808

Ensembl transcript IDs: ENST00000292327.6, ENST00000395869.5, ENST00000431168.1, ENST00000653454.1, ENST00000654597.1, ENST00000655244.1, ENST00000662933.1, ENST00000664891.1

Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTGAAGCACAGCACCACAGGGAGATGTTTAAGCCTCCGGATGACTaGAGGCAGGCCTGGCCTCCCACAAGAGCTGGTGGAGCAGAGTGT +
Preference number: 1 (lower is better)
Translates to: TEAQHHREMFKPPDD*RQAWPPTRAGGAEC
Trigger: ACACTCTGCTCCACCAGCTCTTGTGGGAGGCCAGGCCTGCCTGCAGTCATCCGGAGGCTTAAACATCTCCCTGTGGTGCTGTGCTTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR CCA 90 bp CACCACAGGGAGATGTTTAAGCCTCCGGATGACTGCAGGCAGGCCTaGCCTCCCACAAGAGCTGGTGGAGCAGAGTGTTCTCTAACTCTT +
Preference number: 1 (lower is better)
Translates to: HHREMFKPPDDCRQA*PPTRAGGAECSLTL
Trigger: AAGAGTTAGAGAACACTCTGCTCCACCAGCTCTTGTGGGAGGCCAGGCCTGCCTGCAGTCATCCGGAGGCTTAAACATCTCCCTGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR TCA 90 bp TGCCTGGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTTCTaGCATATCACACTTGGTAGTCAAGTGTGGGCCACCACTGAGTTC +
Preference number: 1 (lower is better)
Translates to: CLGTWVACRPQTRNF*HITLGSQVWATTEF
Trigger: GAACTCAGTGGTGGCCCACACTTGACTACCAAGTGTGATATGTCAGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR GCA 90 bp ACCAAGACGCGGAGACCGGTAGTGGCCCTGAATGCCTGGACACGCTaGTATTTATTGTATTCTAGGCAAGGGGGCAGGGTAAGGAGTATG +
Preference number: 1 (lower is better)
Translates to: TKTRRPVVALNAWTR*YLLYSRQGGRVRSM
Trigger: CATACTCCTTACCCTGCCCCCTTGCCTAGAATACAATAAATAGCAGCGTGTCCAGGCATTCAGGGCCACTACCGGTCTCCGCGTCTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR CCA 90 bp TACTGGAACAGCTTGTGCCTTCAGTCTCTTGCCTGGGCACCTGGGTaGCTTGCCGCCCACAAACAAGGAATTTCTGACATATCACACTTG +
Preference number: 1 (lower is better)
Translates to: YWNSLCLQSLAWAPG*LAAHKQGISDISHL
Trigger: CAAGTGTGATATGTCAGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACTGAAGGCACAAGCTGTTCCAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR CCA 90 bp TTTTCTTTATTATACTGGAACAGCTTGTGCCTTCAGTCTCTTGCCTaGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTTCTGAC +
Preference number: 1 (lower is better)
Translates to: FSLLYWNSLCLQSLA*APGWLAAHKQGISD
Trigger: GTCAGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACTGAAGGCACAAGCTGTTCCAGTATAATAAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR GCA 90 bp ATTATTTTCTTTATTATACTGGAACAGCTTGTGCCTTCAGTCTCTTaGCTGGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTTC +
Preference number: 1 (lower is better)
Translates to: IIFFIILEQLVPSVS*LGTWVACRPQTRNF
Trigger: GAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACTGAAGGCACAAGCTGTTCCAGTATAATAAAGAAAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR CCA 90 bp GCTGTCACAGGTAAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGGAGCACTGCAGCTGGTaGAGTGTGGGCAGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: AVTGKHSLRGARDGNHVEEHCSW*SVGRWQ
Trigger: CTGCCACCTGCCCACACTCCACCAGCTGCAGTGCTC...CTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGTGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395869.5
3UTR-3UTR CCA 90 bp GGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTCTGCACAGCCTTCCCTaGGCTTCCTGGGCACGAGGT +
Preference number: 2 (lower is better)
Translates to: GARDGNHVERSKGFCRSLLHSLP*ASWARG
Trigger: ACCTCGTGCCCAGGAAGCCCAGGGAAGGCTGTGCAG...AAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000662933.1
3UTR-3UTR CCA 90 bp TCCAGGCCGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCAGTGAGCACTGCAGCTaGTGGAGTGTGGGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: SRPLVSASHMGDETSLHSSEHCS*WSVGRW
Trigger: CCACCTGCCCACACTCCACCAGCTGCAGTGCTCACT...GCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCGGCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395869.5
3UTR-3UTR TCA 90 bp ACAGGTAAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCGAAGCCATTTATTCATaGGGCCCATGGGGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: TGKHSLRGARDGNHVERSEAIYS*GPWGGD
Trigger: GTCCCCACCCCATGGGCCTCATGAATAAATGGCTTC...GGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000395869.5
3UTR-3UTR GCA 90 bp ACGACTCCAGGCCGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCGAGATGAGACGTCCCTaGACAGCCTTCCCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: TTPGRWCQHHTWEMRRPCEMRRP*TAFPGL
Trigger: AAGCCCAGGGAAGGCTGTGCAGGGACGTCTCATCTC...GCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCGGCCTGGAGTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
3UTR-3UTR CCA 90 bp ACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCCTGCACAGCCTTCCCTaGGCTTCCTGGGCACGAGGT +
Preference number: 2 (lower is better)
Translates to: TTWRGPRVFAGVLVRLPSLHSLP*ASWARG
Trigger: ACCTCGTGCCCAGGAAGCCCAGGGAAGGCTGTGCAG...GGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000662933.1
3UTR-3UTR CCA 90 bp ACGACTCCAGGCCGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACGACTCCAGGCCGCTaGTGTCAGCATCACACATGG +
Preference number: 2 (lower is better)
Translates to: TTPGRWCQHHTWEMRRPCTTPGR*CQHHTW
Trigger: CCATGTGTGATGCTGACACCAGCGGCCTGGAGTCGT...GCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCGGCCTGGAGTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
3UTR-3UTR CCA 90 bp AAGGCCGGCAAGAAGCCATTTATTCATGAGGCCCATGGGGTGGGGACAGAGCTGGGGTTCAGGAGGGAGTaGGTGCCTACCTGGGCACGA +
Preference number: 2 (lower is better)
Translates to: KAGKKPFIHEAHGVGTELGFRRE*VPTWAR
Trigger: TCGTGCCCAGGTAGGCACCCACTCCCTCCTGAACCC...CAGCTCTGTCCCCACCCCATGGGCCTCATGAATAAATGGCTTCTTGCCGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395869.5
3UTR-3UTR TCA 90 bp ACGACTCCAGGCCGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCATCACACATGGGAGATaGGACGTCCCTGCACAGCCT +
Preference number: 2 (lower is better)
Translates to: TTPGRWCQHHTWEMRRPCITHGR*DVPAQP
Trigger: AGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGAT...GCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCGGCCTGGAGTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
3UTR-3UTR GCA 90 bp GGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGAGATGAGACGTCCCTaGACAGCCTTCCCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: GPETATTWRGPRVFAGVLEMRRP*TAFPGL
Trigger: AAGCCCAGGGAAGGCTGTGCAGGGACGTCTCATCTC...CAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
3UTR-3UTR GCA 90 bp AGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTGAGATGAGACGTCCCTaGACAGCCTTCCCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: RGARDGNHVERSKGFCRSEMRRP*TAFPGL
Trigger: AAGCCCAGGGAAGGCTGTGCAGGGACGTCTCATCTC...ACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
3UTR-3UTR CCA 90 bp GGAAGGCCGGCAAGAAGCCATTTATTCATGAGGCCCATGGGGTGGGGACAGAGCACGACTCCAGGCCGCTaGTGTCAGCATCACACATGG +
Preference number: 2 (lower is better)
Translates to: GRPARSHLFMRPMGWGQSTTPGR*CQHHTW
Trigger: CCATGTGTGATGCTGACACCAGCGGCCTGGAGTCGT...GCTCTGTCCCCACCCCATGGGCCTCATGAATAAATGGCTTCTTGCCGGCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000395869.5
3UTR-3UTR TCA 90 bp GCAAGTCACGTGTCCACCCGACAGGTAGCCGAGGGAGAGAGGAAAGGCAGCATAGGCAGGAGGATTGCTTaGGCCCATGAGTCACGAGTT +
Preference number: 2 (lower is better)
Translates to: ASHVSTRQVAEGERKGSIGRRIA*AHESRV
Trigger: AACTCGTGACTCATGGGCTCAAGCAATCCTCCTGCC...TATGCTGCCTTTCCTCTCTCCCTCGGCTACCTGTCGGGTGGACACGTGACTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR CCA 90 bp ACTACCACCAAGACGCGGAGACCGGTAGTGGCCCTGAATGCCTGGACACGCTGCTTTAAAACAACCAAGTaGCAGCCAGGTGCGGTGGCT +
Preference number: 2 (lower is better)
Translates to: TTTKTRRPVVALNAWTRCFKTTK*QPGAVA
Trigger: AGCCACCGCACCTGGCTGCCACTTGGTTGTTTTAAA...GCAGCGTGTCCAGGCATTCAGGGCCACTACCGGTCTCCGCGTCTTGGTGGTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR CCA 90 bp GCAAGTCACGTGTCCACCCGACAGGTAGCCGAGGGAGAGAGGAAAGGCAGCATAGCCTCCCACAAGAGCTaGTGGAGCAGAGTGTTCTCT +
Preference number: 2 (lower is better)
Translates to: ASHVSTRQVAEGERKGSIASHKS*WSRVFS
Trigger: AGAGAACACTCTGCTCCACCAGCTCTTGTGGGAGGC...TATGCTGCCTTTCCTCTCTCCCTCGGCTACCTGTCGGGTGGACACGTGACTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR CCA 90 bp GCCGGCAAGAAGCCATTTATTCATGAGGCCCATGGGGTGGGGACAGAGCTGCTGTGTCAGCATCACACATaGGAGATGAGACGTCCCTGC +
Preference number: 2 (lower is better)
Translates to: AGKKPFIHEAHGVGTELLCQHHT*EMRRPC
Trigger: GCAGGGACGTCTCATCTCCCATGTGTGATGCTGACA...CAGCAGCTCTGTCCCCACCCCATGGGCCTCATGAATAAATGGCTTCTTGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000395869.5
3UTR-3UTR TCA 90 bp ACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTCATCACACATGGGAGATaGGACGTCCCTGCACAGCCT +
Preference number: 2 (lower is better)
Translates to: TWRGPRVFAGVLVRLPSFITHGR*DVPAQP
Trigger: AGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGAT...GAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
3UTR-3UTR TCA 90 bp TACCACTACCACCAAGACGCGGAGACCGGTAGTGGCCCTGAATGCCTGGACACGCGTACAGGCAGAATATaGAAGTGGACAAGGAGCATG +
Preference number: 2 (lower is better)
Translates to: YHYHQDAETGSGPECLDTRTGRI*KWTRSM
Trigger: CATGCTCCTTGTCCACTTTCATATTCTGCCTGTACG...CGTGTCCAGGCATTCAGGGCCACTACCGGTCTCCGCGTCTTGGTGGTAGTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR CCA 90 bp CACCAAGACGCGGAGACCGGTAGTGGCCCTGAATGCCTGGACACGCTGCTATTTTTTAAAACAACCAAGTaGCAGCCAGGTGCGGTGGCT +
Preference number: 2 (lower is better)
Translates to: HQDAETGSGPECLDTLLFFKTTK*QPGAVA
Trigger: AGCCACCGCACCTGGCTGCCACTTGGTTGTTTTAAA...AAATAGCAGCGTGTCCAGGCATTCAGGGCCACTACCGGTCTCCGCGTCTTGGTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR CCA 90 bp AGTCTCTTGCCTGGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTTCTGCTTGGTAGTCAAGTGTaGGCCACCACTGAGTTCAGG +
Preference number: 2 (lower is better)
Translates to: SLLPGHLGGLPPTNKEFLLGSQV*ATTEFR
Trigger: CCTGAACTCAGTGGTGGCCCACACTTGACTACCAAG...CAGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR CCA 90 bp TGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTCCCATGTCAGCATCACACATaGGAGATGAGACGTCCCTGC +
Preference number: 2 (lower is better)
Translates to: WRGPRVFAGVLVRLPSFPCQHHT*EMRRPC
Trigger: GCAGGGACGTCTCATCTCCCATGTGTGATGCTGACA...TGGGAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
3UTR-3UTR CCA 90 bp ACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTCTGTCAGCATCACACATaGGAGATGAGACGTCCCTGC +
Preference number: 2 (lower is better)
Translates to: TWRGPRVFAGVLVRLPSFCQHHT*EMRRPC
Trigger: GCAGGGACGTCTCATCTCCCATGTGTGATGCTGACA...GAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
3UTR CAA 90 bp CGGAGACCGGTAGTGGCCCTGAATGCCTGGACACGCTGCTATTTATaGTATTCTAGGCAAGGGGGCAGGGTAAGGAGTATGAGTCATCTC +
Preference number: 2 (lower is better)
Translates to: RRPVVALNAWTRCYL*YSRQGGRVRSMSHL
Trigger: GAGATGACTCATACTCCTTACCCTGCCCCCTTGCCTAGAATACAATAAATAGCAGCGTGTCCAGGCATTCAGGGCCACTACCGGTCTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR CCA 90 bp TCCAGAGAAAGGGAGACTCCCTTTCCCAGTCTGCTAAGTAACAGGTGCCTTCCCCTTGGTAGTCAAGTGTaGGCCACCACTGAGTTCAGG +
Preference number: 2 (lower is better)
Translates to: SRERETPFPSLLSNRCLPLGSQV*ATTEFR
Trigger: CCTGAACTCAGTGGTGGCCCACACTTGACTACCAAG...GGGAAGGCACCTGTTACTTAGCAGACTGGGAAAGGGAGTCTCCCTTTCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR TCA 90 bp ACTACCACCAAGACGCGGAGACCGGTAGTGGCCCTGAATGCCTGGACACGCTGCCAAACAAGGAATTTCTaGCATATCACACTTGGTAGT +
Preference number: 2 (lower is better)
Translates to: TTTKTRRPVVALNAWTRCQTRNF*HITLGS
Trigger: ACTACCAAGTGTGATATGTCAGAAATTCCTTGTTTG...GCAGCGTGTCCAGGCATTCAGGGCCACTACCGGTCTCCGCGTCTTGGTGGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR TCA 90 bp GCAAGTCACGTGTCCACCCGACAGGTAGCCGAGGGAGAGAGGAAAGGCAGCATACAAACAAGGAATTTCTaGCATATCACACTTGGTAGT +
Preference number: 2 (lower is better)
Translates to: ASHVSTRQVAEGERKGSIQTRNF*HITLGS
Trigger: ACTACCAAGTGTGATATGTCAGAAATTCCTTGTTTG...TATGCTGCCTTTCCTCTCTCCCTCGGCTACCTGTCGGGTGGACACGTGACTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR GCA 90 bp CTACTGCTATCTTCTAAGAACTTAAAAGGAGGAGCCAGGCGTACAGGCAGAATAGGCACCTGGGTGGCTTaGCGCCCACAAACAAGGAAT +
Preference number: 2 (lower is better)
Translates to: LLLSSKNLKGGARRTGRIGTWVA*RPQTRN
Trigger: ATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCC...TATTCTGCCTGTACGCCTGGCTCCTCCTTTTAAGTTCTTAGAAGATAGCAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR TCA 90 bp CTACTGCTATCTTCTAAGAACTTAAAAGGAGGAGCCAGGCGTACAGGCAGAATAGGCAGGAGGATTGCTTaGGCCCATGAGTCACGAGTT +
Preference number: 2 (lower is better)
Translates to: LLLSSKNLKGGARRTGRIGRRIA*AHESRV
Trigger: AACTCGTGACTCATGGGCTCAAGCAATCCTCCTGCC...TATTCTGCCTGTACGCCTGGCTCCTCCTTTTAAGTTCTTAGAAGATAGCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR CCA 90 bp CACCAAGACGCGGAGACCGGTAGTGGCCCTGAATGCCTGGACACGCTGCTATTTTTTTCTTTATTATACTaGAACAGCTTGTGCCTTCAG +
Preference number: 2 (lower is better)
Translates to: HQDAETGSGPECLDTLLFFSLLY*NSLCLQ
Trigger: CTGAAGGCACAAGCTGTTCCAGTATAATAAAGAAAA...AAATAGCAGCGTGTCCAGGCATTCAGGGCCACTACCGGTCTCCGCGTCTTGGTG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR CAA 90 bp GGGTGGCTTGCCGCCCACAAACAAGGAATTTCTGACATATCACACTaGGTAGTCAAGTGTGGGCCACCACTGAGTTCAGGTTTAAAACAA +
Preference number: 2 (lower is better)
Translates to: GWLAAHKQGISDISH*VVKCGPPLSSGLKQ
Trigger: TTGTTTTAAACCTGAACTCAGTGGTGGCCCACACTTGACTACCAAGTGTGATATGTCAGAAATTCCTTGTTTGTGGGCGGCAAGCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR CAA 90 bp GTCACAGGTAAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGGTTTTTGCAGGAGTCTaGGTAAGGCTCCCCTCCTTC +
Preference number: 3 (lower is better)
Translates to: VTGKHSLRGARDGNHVERVFAGV*VRLPSF
Trigger: GAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAAC...CCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
3UTR GCA 72 bp AGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTaGAGGAGTCTTGGTAAGGCTCCCCTCCTTCCCACG +
Preference number: 3 (lower is better)
Translates to: RDGNHVERSKGF*RSLGKAPLLPT
Trigger: CGTGGGAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
3UTR CCA 72 bp GAGATGTTTAAGCCTCCGGATGACTGCAGGCAGGCCTaGCCTCCCACAAGAGCTGGTGGAGCAGAGTGTTCT +
Preference number: 3 (lower is better)
Translates to: EMFKPPDDCRQA*PPTRAGGAECS
Trigger: AGAACACTCTGCTCCACCAGCTCTTGTGGGAGGCCAGGCCTGCCTGCAGTCATCCGGAGGCTTAAACATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR CAA 90 bp AGGCCGGCAAGAAGCCATTTATTCATGAGGCCCATGGGGTGGGGACAGAGCTGCGTTTTTGCAGGAGTCTaGGTAAGGCTCCCCTCCTTC +
Preference number: 3 (lower is better)
Translates to: RPARSHLFMRPMGWGQSCVFAGV*VRLPSF
Trigger: GAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAAC...GCAGCTCTGTCCCCACCCCATGGGCCTCATGAATAAATGGCTTCTTGCCGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000395869.5
3UTR-3UTR CAA 90 bp GATCTCTCAAGAAGCCCTTATCTGGGCATGACAGAGGGCTCACGCTCTTGTCTTGGGCACCTGGGTGGCTaGCCGCCCACAAACAAGGAA +
Preference number: 3 (lower is better)
Translates to: DLSRSPYLGMTEGSRSCLGHLGG*PPTNKE
Trigger: TTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCC...AAGACAAGAGCGTGAGCCCTCTGTCATGCCCAGATAAGGGCTTCTTGAGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR CAA 90 bp CACAGGGAGATGTTTAAGCCTCCGGATGACTGCAGGCAGGCCTGGCCTCCCACAAGAGGGCTCACGCTCTaGTCTTCTAGTCATCTCTCA +
Preference number: 3 (lower is better)
Translates to: HREMFKPPDDCRQAWPPTRGLTL*SSSHLS
Trigger: TGAGAGATGACTAGAAGACAAGAGCGTGAGCCCTCT...TGTGGGAGGCCAGGCCTGCCTGCAGTCATCCGGAGGCTTAAACATCTCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR-3UTR CAA 90 bp GCAAGTCACGTGTCCACCCGACAGGTAGCCGAGGGAGAGAGGAAAGGCAGCATAAGAGGGCTCACGCTCTaGTCTTCTAGTCATCTCTCA +
Preference number: 3 (lower is better)
Translates to: ASHVSTRQVAEGERKGSIRGLTL*SSSHLS
Trigger: TGAGAGATGACTAGAAGACAAGAGCGTGAGCCCTCT...TATGCTGCCTTTCCTCTCTCCCTCGGCTACCTGTCGGGTGGACACGTGACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR TCA 72 bp ACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTTCTaGCATATCACACTTGGTAGTCAAGTGTGGGCCACC +
Preference number: 3 (lower is better)
Translates to: TWVACRPQTRNF*HITLGSQVWAT
Trigger: GGTGGCCCACACTTGACTACCAAGTGTGATATGTCAGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR GCA 72 bp TTTATTATACTGGAACAGCTTGTGCCTTCAGTCTCTTaGCTGGGCACCTGGGTGGCTTGCCGCCCACAAACA +
Preference number: 3 (lower is better)
Translates to: FIILEQLVPSVS*LGTWVACRPQT
Trigger: TGTTTGTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACTGAAGGCACAAGCTGTTCCAGTATAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp ACAGGTAAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCGGGAGGTGCGGGAGCTaGAGCTGCCTTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TGKHSLRGARDGNHVERSGRCGS*SCLGGC
Trigger: GCAGCCCCCAAGGCAGCTCCAGCTCCCGCACCTCCC...GGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp ACTACCACCAAGACGCGGAGACCGGTAGTGGCCCTGAATGCCTGGACACGCTGCGGGAGGTGCGGGAGCTaGAGCTGCCTTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TTTKTRRPVVALNAWTRCGRCGS*SCLGGC
Trigger: GCAGCCCCCAAGGCAGCTCCAGCTCCCGCACCTCCC...GCAGCGTGTCCAGGCATTCAGGGCCACTACCGGTCTCCGCGTCTTGGTGGTAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp AGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTGGGAGGTGCGGGAGCTaGAGCTGCCTTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RGARDGNHVERSKGFCRSGRCGS*SCLGGC
Trigger: GCAGCCCCCAAGGCAGCTCCAGCTCCCGCACCTCCC...ACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp GCAAGTCACGTGTCCACCCGACAGGTAGCCGAGGGAGAGAGGAAAGGCAGCATAGGGAGGTGCGGGAGCTaGAGCTGCCTTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ASHVSTRQVAEGERKGSIGRCGS*SCLGGC
Trigger: GCAGCCCCCAAGGCAGCTCCAGCTCCCGCACCTCCC...TATGCTGCCTTTCCTCTCTCCCTCGGCTACCTGTCGGGTGGACACGTGACTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp ACTACCACCAAGACGCGGAGACCGGTAGTGGCCCTGAATGCCTGGACACGCTGCGCCTCTCACCCAGCGTaGCCAGCACGTGGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: TTTKTRRPVVALNAWTRCASHPA*PARGEA
Trigger: AGCTTCGCCACGTGCTGGCCACGCTGGGTGAGAGGC...GCAGCGTGTCCAGGCATTCAGGGCCACTACCGGTCTCCGCGTCTTGGTGGTAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp ACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCGGGAGGTGCGGGAGCTaGAGCTGCCTTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TTWRGPRVFAGVLVRLPSGRCGS*SCLGGC
Trigger: GCAGCCCCCAAGGCAGCTCCAGCTCCCGCACCTCCC...GGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp GCTGTCACAGGTAAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGCTGCACAGCCTTCCCTaGGCTTCCTGGGCACGAGGT +
Preference number: 4 (lower is better)
Translates to: AVTGKHSLRGARDGNHVELHSLP*ASWARG
Trigger: ACCTCGTGCCCAGGAAGCCCAGGGAAGGCTGTGCAG...CTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGTGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000662933.1
CDS-3UTR CCA 90 bp AAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTGAGCACTGCAGCTGGTaGAGTGTGGGCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KHSLRGARDGNHVERSKGEHCSW*SVGRWQ
Trigger: CTGCCACCTGCCCACACTCCACCAGCTGCAGTGCTC...ACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395869.5
CDS-3UTR TCA 90 bp ACGACTCCAGGCCGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCCAGGTAAGCACAGCCTaGGAGGGGCCAGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: TTPGRWCQHHTWEMRRPCQVSTA*EGPETA
Trigger: TGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTG...GCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCGGCCTGGAGTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR TCA 90 bp AGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCCAGGTAAGCACAGCCTaGGAGGGGCCAGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: SLRGARDGNHVERSKGFCQVSTA*EGPETA
Trigger: TGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTG...GCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp AACAGCTTGTGCCTTCAGTCTCTTGCCTGGGCACCTGGGTGGCTTGCCGCCCACGACACGGAGCACTTCTaGCTGTGTGGGGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: NSLCLQSLAWAPGWLAAHDTEHF*LCGVLA
Trigger: GGCCAGAACCCCACACAGGCAGAAGTGCTCCGTGTC...GTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACTGAAGGCACAAGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp AGGGAGATGTTTAAGCCTCCGGATGACTGCAGGCAGGCCTGGCCTCCCACAAGAAAGCCTCCGGATGACTaGAGGCAGGCCTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: REMFKPPDDCRQAWPPTRKPPDD*RQAWPP
Trigger: GGGAGGCCAGGCCTGCCTGCAGTCATCCGGAGGCTT...TCTTGTGGGAGGCCAGGCCTGCCTGCAGTCATCCGGAGGCTTAAACATCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp GGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGCCTCTCACCCAGCGTaGCCAGCACGTGGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: GARDGNHVERSKGFCRSLASHPA*PARGEA
Trigger: AGCTTCGCCACGTGCTGGCCACGCTGGGTGAGAGGC...AAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp TGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCCCTGGGGCCTCTCACCCAGCGTaGCCAGCACGTGGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: WCQHHTWEMRRPCTAFPGASHPA*PARGEA
Trigger: AGCTTCGCCACGTGCTGGCCACGCTGGGTGAGAGGC...CCCAGGGAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp CCGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCCCCTGCACAGCCTTCCCTaGGCTTCCTGGGCACGAGGT +
Preference number: 4 (lower is better)
Translates to: PLVSASHMGDETSLHSLPLHSLP*ASWARG
Trigger: ACCTCGTGCCCAGGAAGCCCAGGGAAGGCTGTGCAG...GGGAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000662933.1
CDS-3UTR GCA 90 bp ACTACCACCAAGACGCGGAGACCGGTAGTGGCCCTGAATGCCTGGACACGCTGCGGCACCTGGGTGGCTTaGCGCCCACAAACAAGGAAT +
Preference number: 4 (lower is better)
Translates to: TTTKTRRPVVALNAWTRCGTWVA*RPQTRN
Trigger: ATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCC...GCAGCGTGTCCAGGCATTCAGGGCCACTACCGGTCTCCGCGTCTTGGTGGTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp GCCTGGCCTCCCACAAGAGCTGGTGGAGCAGAGTGTTCTCTAACTCTTCCAGAGAAGCCTCCGGATGACTaGAGGCAGGCCTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: AWPPTRAGGAECSLTLPEKPPDD*RQAWPP
Trigger: GGGAGGCCAGGCCTGCCTGCAGTCATCCGGAGGCTT...CTCTGGAAGAGTTAGAGAACACTCTGCTCCACCAGCTCTTGTGGGAGGCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp ACAGGTAAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCCCTTGGGGGCTGCCTTaGCATCATCCTTCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TGKHSLRGARDGNHVERSPWGLP*HHPSWA
Trigger: AGCCCAAGAAGGATGATGCCAAGGCAGCCCCCAAGG...GGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp GCTGTCACAGGTAAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGCCTTGGGGGCTGCCTTaGCATCATCCTTCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: AVTGKHSLRGARDGNHVEPWGLP*HHPSWA
Trigger: AGCCCAAGAAGGATGATGCCAAGGCAGCCCCCAAGG...CTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGTGACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp GCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCGCCTCTCACCCAGCGTaGCCAGCACGTGGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: ATTWRGPRVFAGVLVRLPASHPA*PARGEA
Trigger: AGCTTCGCCACGTGCTGGCCACGCTGGGTGAGAGGC...GGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp GCTGTCACAGGTAAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGCTTCCCTGGGCTTCCTaGGCACGAGGTTTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: AVTGKHSLRGARDGNHVELPWAS*ARGLAG
Trigger: TCCAGCTAAACCTCGTGCCCAGGAAGCCCAGGGAAG...CTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGTGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000662933.1
CDS-3UTR CCA 90 bp AGGGAGATGTTTAAGCCTCCGGATGACTGCAGGCAGGCCTGGCCTCCCACAAGAGACTGCAGGCAGGCCTaGCCTCCCACAAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: REMFKPPDDCRQAWPPTRDCRQA*PPTRAG
Trigger: ACCAGCTCTTGTGGGAGGCCAGGCCTGCCTGCAGTC...TCTTGTGGGAGGCCAGGCCTGCCTGCAGTCATCCGGAGGCTTAAACATCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp GCAAGTCACGTGTCCACCCGACAGGTAGCCGAGGGAGAGAGGAAAGGCAGCATAGACTGCAGGCAGGCCTaGCCTCCCACAAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ASHVSTRQVAEGERKGSIDCRQA*PPTRAG
Trigger: ACCAGCTCTTGTGGGAGGCCAGGCCTGCCTGCAGTC...TATGCTGCCTTTCCTCTCTCCCTCGGCTACCTGTCGGGTGGACACGTGACTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR TCA 90 bp GCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCCAGGTAAGCACAGCCTaGGAGGGGCCAGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: ATTWRGPRVFAGVLVRLPQVSTA*EGPETA
Trigger: TGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTG...GGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR TCA 90 bp AGAGAGACAGACAGCTGGGCCCAGGGTACCACTACCACCAAGACGCGGAGACCGAGTGGACAAGGAGCATaGCCACTGAAGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: RETDSWAQGTTTTKTRRPSGQGA*PLKHST
Trigger: GGTGCTGTGCTTCAGTGGTCATGCTCCTTGTCCACT...CGGTCTCCGCGTCTTGGTGGTAGTGGTACCCTGGGCCCAGCTGTCTGTCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000653454.1
CDS-3UTR GCA 90 bp GGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGACACGGAGCACTTCTaGCTGTGTGGGGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GPETATTWRGPRVFAGVLDTEHF*LCGVLA
Trigger: GGCCAGAACCCCACACAGGCAGAAGTGCTCCGTGTC...CAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp CCTTCCCACGACTCCAGGCCGCTGGTGTCAGCATCACACATGGGAGATGAGACGGAGATGAGACGTCCCTaGACAGCCTTCCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PSHDSRPLVSASHMGDETEMRRP*TAFPGL
Trigger: AAGCCCAGGGAAGGCTGTGCAGGGACGTCTCATCTC...CGTCTCATCTCCCATGTGTGATGCTGACACCAGCGGCCTGGAGTCGTGGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp AGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTGAGCTGGAGCTGCCTTaGGGGCTGCCTTGGCATCAT +
Preference number: 4 (lower is better)
Translates to: RGARDGNHVERSKGFCRSELELP*GLPWHH
Trigger: ATGATGCCAAGGCAGCCCCCAAGGCAGCTCCAGCTC...ACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp CACCAAGACGCGGAGACCGGTAGTGGCCCTGAATGCCTGGACACGCTGCTATTTGAGCTGGAGCTGCCTTaGGGGCTGCCTTGGCATCAT +
Preference number: 4 (lower is better)
Translates to: HQDAETGSGPECLDTLLFELELP*GLPWHH
Trigger: ATGATGCCAAGGCAGCCCCCAAGGCAGCTCCAGCTC...AAATAGCAGCGTGTCCAGGCATTCAGGGCCACTACCGGTCTCCGCGTCTTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp GGCCGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCACGACTCCAGGCCGCTaGTGTCAGCATCACACATGG +
Preference number: 4 (lower is better)
Translates to: GRWCQHHTWEMRRPCTAFTTPGR*CQHHTW
Trigger: CCATGTGTGATGCTGACACCAGCGGCCTGGAGTCGT...GAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp ACGACTCCAGGCCGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCGAGTGGGTGCCTACCTaGGCACGAGGTTTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TTPGRWCQHHTWEMRRPCEWVPT*ARGLAG
Trigger: TCCAGCTAAACCTCGTGCCCAGGTAGGCACCCACTC...GCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCGGCCTGGAGTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395869.5
CDS-3UTR CCA 90 bp GGAAGGCCGGCAAGAAGCCATTTATTCATGAGGCCCATGGGGTGGGGACAGAGCAGTGAGCACTGCAGCTaGTGGAGTGTGGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRPARSHLFMRPMGWGQSSEHCS*WSVGRW
Trigger: CCACCTGCCCACACTCCACCAGCTGCAGTGCTCACT...GCTCTGTCCCCACCCCATGGGCCTCATGAATAAATGGCTTCTTGCCGGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395869.5
CDS-3UTR TCA 90 bp GGCCGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCGAAGCCATTTATTCATaGGGCCCATGGGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GRWCQHHTWEMRRPCTAFEAIYS*GPWGGD
Trigger: GTCCCCACCCCATGGGCCTCATGAATAAATGGCTTC...GAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000395869.5
CDS-3UTR GCA 90 bp AGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGCTGCCTTGGGGGCTaGCTTGGCATCATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLRGARDGNHVERSKGFCSCLGG*LGIILL
Trigger: AAGAAGGATGATGCCAAGGCAGCCCCCAAGGCAGCT...GCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp GAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTCCCACGGACACGGAGCACTTCTaGCTGTGTGGGGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ERSKGFCRSLGKAPLLPTDTEHF*LCGVLA
Trigger: GGCCAGAACCCCACACAGGCAGAAGTGCTCCGTGTC...CGTGGGAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp ACAGGTAAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCCCATTGGAGTCCTCTTaGCCAGCCATCAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: TGKHSLRGARDGNHVERSPLESS*PAINFS
Trigger: GGAGAAGTTGATGGCTGGGCAAGAGGACTCCAATGG...GGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp GCTGTCACAGGTAAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGATCCTTCTTGGGCTCTaGCTTTTTGGGGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: AVTGKHSLRGARDGNHVEILLGL*LFGGHW
Trigger: CCAATGGCCCCCAAAAAGCCAGAGCCCAAGAAGGAT...CTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGTGACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp GGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGAGCTCTTCCTGTCTTaGCTTCCCCAGGACACGGAG +
Preference number: 4 (lower is better)
Translates to: GPETATTWRGPRVFAGVLELFLS*LPQDTE
Trigger: CTCCGTGTCCTGGGGAAGCCAAGACAGGAAGAGCTC...CAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp AAGGCCGGCAAGAAGCCATTTATTCATGAGGCCCATGGGGTGGGGACAGAGCTGATGAGGCCCATGGGGTaGGGACAGAGCTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: KAGKKPFIHEAHGVGTELMRPMG*GQSCCH
Trigger: GTGACAGCAGCTCTGTCCCCACCCCATGGGCCTCAT...CAGCTCTGTCCCCACCCCATGGGCCTCATGAATAAATGGCTTCTTGCCGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000395869.5
CDS-3UTR CCA 90 bp TGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTCCCAGGGTTCAGGAGGGAGTaGGTGCCTACCTGGGCACGA +
Preference number: 4 (lower is better)
Translates to: WRGPRVFAGVLVRLPSFPGFRRE*VPTWAR
Trigger: TCGTGCCCAGGTAGGCACCCACTCCCTCCTGAACCC...TGGGAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395869.5
CDS-3UTR TCA 90 bp CACAGGGAGATGTTTAAGCCTCCGGATGACTGCAGGCAGGCCTGGCCTCCCACACACACTGCCCGTAGGTaGTCTTCATCTCACACTTGG +
Preference number: 4 (lower is better)
Translates to: HREMFKPPDDCRQAWPPTHTARR*SSSHTW
Trigger: CCAAGTGTGAGATGAAGATCACCTACGGGCAGTGTG...TGTGGGAGGCCAGGCCTGCCTGCAGTCATCCGGAGGCTTAAACATCTCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR TCA 90 bp CCGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCCCCACACTGCCCGTAGGTaGTCTTCATCTCACACTTGG +
Preference number: 4 (lower is better)
Translates to: PLVSASHMGDETSLHSLPHTARR*SSSHTW
Trigger: CCAAGTGTGAGATGAAGATCACCTACGGGCAGTGTG...GGGAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR TCA 90 bp CGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCCCTGAAGCCATTTATTCATaGGGCCCATGGGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: RWCQHHTWEMRRPCTAFPEAIYS*GPWGGD
Trigger: GTCCCCACCCCATGGGCCTCATGAATAAATGGCTTC...AGGGAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000395869.5
CDS-3UTR TCA 90 bp AGGGAGATGTTTAAGCCTCCGGATGACTGCAGGCAGGCCTGGCCTCCCACAAGAGGCAGGAGGATTGCTTaGGCCCATGAGTCACGAGTT +
Preference number: 4 (lower is better)
Translates to: REMFKPPDDCRQAWPPTRGRRIA*AHESRV
Trigger: AACTCGTGACTCATGGGCTCAAGCAATCCTCCTGCC...TCTTGTGGGAGGCCAGGCCTGCCTGCAGTCATCCGGAGGCTTAAACATCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp GGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGAGCTGCCTTGGGGGCTaGCTTGGCATCATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GQRRQPRGEVQGFLQESWSCLGG*LGIILL
Trigger: AAGAAGGATGATGCCAAGGCAGCCCCCAAGGCAGCT...CCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp ACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTCGACACGGAGCACTTCTaGCTGTGTGGGGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: TWRGPRVFAGVLVRLPSFDTEHF*LCGVLA
Trigger: GGCCAGAACCCCACACAGGCAGAAGTGCTCCGTGTC...GAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp CCGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCCCCCATTGGAGTCCTCTTaGCCAGCCATCAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLVSASHMGDETSLHSLPPLESS*PAINFS
Trigger: GGAGAAGTTGATGGCTGGGCAAGAGGACTCCAATGG...GGGAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp ACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCGAGATGAGACGTCCCTaGACAGCCTTCCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TTWRGPRVFAGVLVRLPSEMRRP*TAFPGL
Trigger: AAGCCCAGGGAAGGCTGTGCAGGGACGTCTCATCTC...GGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp ACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTCTCAGGAGGGAGTGGGTaGCTACCTGGGCACGAGGTT +
Preference number: 4 (lower is better)
Translates to: TWRGPRVFAGVLVRLPSFSGGSG*LPGHEV
Trigger: AACCTCGTGCCCAGGTAGGCACCCACTCCCTCCTGA...GAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395869.5
CDS-3UTR CCA 90 bp ACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCCCTTGGGGGCTGCCTTaGCATCATCCTTCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TTWRGPRVFAGVLVRLPSPWGLP*HHPSWA
Trigger: AGCCCAAGAAGGATGATGCCAAGGCAGCCCCCAAGG...GGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp TGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTCCCAGAGCTGGAGCTGCCTTaGGGGCTGCCTTGGCATCAT +
Preference number: 4 (lower is better)
Translates to: WRGPRVFAGVLVRLPSFPELELP*GLPWHH
Trigger: ATGATGCCAAGGCAGCCCCCAAGGCAGCTCCAGCTC...TGGGAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp GCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCGAGCTCTTCCTGTCTTaGCTTCCCCAGGACACGGAG +
Preference number: 4 (lower is better)
Translates to: ATTWRGPRVFAGVLVRLPELFLS*LPQDTE
Trigger: CTCCGTGTCCTGGGGAAGCCAAGACAGGAAGAGCTC...GGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp ACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCGAGCTCTTCCTGTCTTaGCTTCCCCAGGACACGGAG +
Preference number: 4 (lower is better)
Translates to: TTWRGPRVFAGVLVRLPSELFLS*LPQDTE
Trigger: CTCCGTGTCCTGGGGAAGCCAAGACAGGAAGAGCTC...GGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp CAGTCTCTTGCCTGGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTTCTGAGCTCTTCCTGTCTTaGCTTCCCCAGGACACGGAG +
Preference number: 4 (lower is better)
Translates to: QSLAWAPGWLAAHKQGISELFLS*LPQDTE
Trigger: CTCCGTGTCCTGGGGAAGCCAAGACAGGAAGAGCTC...AGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp AAGCCCTTATCTGGGCATGACAGAGGGCTCACGCTCTTGTCTTCTAGTCATCTCGCCTCTCACCCAGCGTaGCCAGCACGTGGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: KPLSGHDRGLTLLSSSHLASHPA*PARGEA
Trigger: AGCTTCGCCACGTGCTGGCCACGCTGGGTGAGAGGC...GAGATGACTAGAAGACAAGAGCGTGAGCCCTCTGTCATGCCCAGATAAGGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp GCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCCTTCCCTGGGCTTCCTaGGCACGAGGTTTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: ATTWRGPRVFAGVLVRLPLPWAS*ARGLAG
Trigger: TCCAGCTAAACCTCGTGCCCAGGAAGCCCAGGGAAG...GGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000662933.1
CDS-3UTR CCA 90 bp ACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCACGACTCCAGGCCGCTaGTGTCAGCATCACACATGG +
Preference number: 4 (lower is better)
Translates to: TTWRGPRVFAGVLVRLPSTTPGR*CQHHTW
Trigger: CCATGTGTGATGCTGACACCAGCGGCCTGGAGTCGT...GGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp CCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAATGAGGCCCATGGGGTaGGGACAGAGCTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PETATTWRGPRVFAGVLVMRPMG*GQSCCH
Trigger: GTGACAGCAGCTCTGTCCCCACCCCATGGGCCTCAT...TACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000395869.5
CDS-3UTR CCA 90 bp AACAGCTTGTGCCTTCAGTCTCTTGCCTGGGCACCTGGGTGGCTTGCCGCCCACTTTAAAACAACCAAGTaGCAGCCAGGTGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: NSLCLQSLAWAPGWLAAHFKTTK*QPGAVA
Trigger: AGCCACCGCACCTGGCTGCCACTTGGTTGTTTTAAA...GTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACTGAAGGCACAAGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp AGGGAGATGTTTAAGCCTCCGGATGACTGCAGGCAGGCCTGGCCTCCCACAAGAGCCTCCCACAAGAGCTaGTGGAGCAGAGTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: REMFKPPDDCRQAWPPTRASHKS*WSRVFS
Trigger: AGAGAACACTCTGCTCCACCAGCTCTTGTGGGAGGC...TCTTGTGGGAGGCCAGGCCTGCCTGCAGTCATCCGGAGGCTTAAACATCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR TCA 90 bp GGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTCACACTGCCCGTAGGTaGTCTTCATCTCACACTTGG +
Preference number: 4 (lower is better)
Translates to: GARDGNHVERSKGFCRSLHTARR*SSSHTW
Trigger: CCAAGTGTGAGATGAAGATCACCTACGGGCAGTGTG...AAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR TCA 90 bp ACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCATCACACATGGGAGATaGGACGTCCCTGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: TTWRGPRVFAGVLVRLPSITHGR*DVPAQP
Trigger: AGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGAT...GGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR TCA 90 bp AGAGAGACAGACAGCTGGGCCCAGGGTACCACTACCACCAAGACGCGGAGACCGCGTACAGGCAGAATATaGAAGTGGACAAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: RETDSWAQGTTTTKTRRPRTGRI*KWTRSM
Trigger: CATGCTCCTTGTCCACTTTCATATTCTGCCTGTACG...CGGTCTCCGCGTCTTGGTGGTAGTGGTACCCTGGGCCCAGCTGTCTGTCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000653454.1
CDS-3UTR GCA 90 bp CCTTCCCACGACTCCAGGCCGCTGGTGTCAGCATCACACATGGGAGATGAGACGCGAAGTCCTCATAGGTaGCTGTGTCCTTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PSHDSRPLVSASHMGDETRSPHR*LCPCSW
Trigger: CCAAGAACAAGGACACAGGCACCTATGAGGACTTCG...CGTCTCATCTCCCATGTGTGATGCTGACACCAGCGGCCTGGAGTCGTGGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp GGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTCCATTGGAGTCCTCTTaGCCAGCCATCAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: GARDGNHVERSKGFCRSLPLESS*PAINFS
Trigger: GGAGAAGTTGATGGCTGGGCAAGAGGACTCCAATGG...AAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp CACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTGAGATGAGACGTCCCTaGACAGCCTTCCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: HVERSKGFCRSLGKAPLLEMRRP*TAFPGL
Trigger: AAGCCCAGGGAAGGCTGTGCAGGGACGTCTCATCTC...AAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp GGAAGGCCGGCAAGAAGCCATTTATTCATGAGGCCCATGGGGTGGGGACAGAGCATCCTTCTTGGGCTCTaGCTTTTTGGGGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: GRPARSHLFMRPMGWGQSILLGL*LFGGHW
Trigger: CCAATGGCCCCCAAAAAGCCAGAGCCCAAGAAGGAT...GCTCTGTCCCCACCCCATGGGCCTCATGAATAAATGGCTTCTTGCCGGCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000395869.5
CDS-3UTR CCA 90 bp CCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGTCTTCATCTCACACTTaGGTGTGCGGTCGAACAGCA +
Preference number: 4 (lower is better)
Translates to: PERGQRRQPRGEVQGFLQSSSHT*VCGRTA
Trigger: TGCTGTTCGACCGCACACCCAAGTGTGAGATGAAGA...CTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp CGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCCCTTGTCAGCATCACACATaGGAGATGAGACGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RWCQHHTWEMRRPCTAFPCQHHT*EMRRPC
Trigger: GCAGGGACGTCTCATCTCCCATGTGTGATGCTGACA...AGGGAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp CCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAACGACTCCAGGCCGCTaGTGTCAGCATCACACATGG +
Preference number: 4 (lower is better)
Translates to: PETATTWRGPRVFAGVLVTTPGR*CQHHTW
Trigger: CCATGTGTGATGCTGACACCAGCGGCCTGGAGTCGT...TACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp TGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCCCTGGGGAGACGGCAACCACGTaGAGAGGTCCAAGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: WCQHHTWEMRRPCTAFPGETATT*RGPRVF
Trigger: AAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTC...CCCAGGGAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp CGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCCCTGAGACGGCAACCACGTaGAGAGGTCCAAGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: RWCQHHTWEMRRPCTAFPETATT*RGPRVF
Trigger: AAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTC...AGGGAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp CACAGGGAGATGTTTAAGCCTCCGGATGACTGCAGGCAGGCCTGGCCTCCCACATCCCACAAGAGCTGGTaGAGCAGAGTGTTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: HREMFKPPDDCRQAWPPTSHKSW*SRVFSN
Trigger: GTTAGAGAACACTCTGCTCCACCAGCTCTTGTGGGA...TGTGGGAGGCCAGGCCTGCCTGCAGTCATCCGGAGGCTTAAACATCTCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp GCCTGGCCTCCCACAAGAGCTGGTGGAGCAGAGTGTTCTCTAACTCTTCCAGAGGCCTCCCACAAGAGCTaGTGGAGCAGAGTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: AWPPTRAGGAECSLTLPEASHKS*WSRVFS
Trigger: AGAGAACACTCTGCTCCACCAGCTCTTGTGGGAGGC...CTCTGGAAGAGTTAGAGAACACTCTGCTCCACCAGCTCTTGTGGGAGGCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR TCA 90 bp TGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTCCCAATCACACATGGGAGATaGGACGTCCCTGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: WRGPRVFAGVLVRLPSFPITHGR*DVPAQP
Trigger: AGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGAT...TGGGAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR TCA 90 bp AACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCATCACACATGGGAGATaGGACGTCCCTGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: NHVERSKGFCRSLGKAPLITHGR*DVPAQP
Trigger: AGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGAT...GAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp ACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTCAGCTGCCTTGGGGGCTaGCTTGGCATCATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: TWRGPRVFAGVLVRLPSFSCLGG*LGIILL
Trigger: AAGAAGGATGATGCCAAGGCAGCCCCCAAGGCAGCT...GAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp GGAAGGCCGGCAAGAAGCCATTTATTCATGAGGCCCATGGGGTGGGGACAGAGCCGAAGTCCTCATAGGTaGCTGTGTCCTTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GRPARSHLFMRPMGWGQSRSPHR*LCPCSW
Trigger: CCAAGAACAAGGACACAGGCACCTATGAGGACTTCG...GCTCTGTCCCCACCCCATGGGCCTCATGAATAAATGGCTTCTTGCCGGCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000395869.5
CDS-3UTR CCA 90 bp GAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTCCCACGTGTCAGCATCACACATaGGAGATGAGACGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ERSKGFCRSLGKAPLLPTCQHHT*EMRRPC
Trigger: GCAGGGACGTCTCATCTCCCATGTGTGATGCTGACA...CGTGGGAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp CACCAAGACGCGGAGACCGGTAGTGGCCCTGAATGCCTGGACACGCTGCTATTTGAGAAATCCTGTACCTaGGCACGAGGTTTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: HQDAETGSGPECLDTLLFEKSCT*ARGLAG
Trigger: TCCAGCTAAACCTCGTGCCCAGGTACAGGATTTCTC...AAATAGCAGCGTGTCCAGGCATTCAGGGCCACTACCGGTCTCCGCGTCTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp GCAAGTCACGTGTCCACCCGACAGGTAGCCGAGGGAGAGAGGAAAGGCAGCATATTTAAAACAACCAAGTaGCAGCCAGGTGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ASHVSTRQVAEGERKGSIFKTTK*QPGAVA
Trigger: AGCCACCGCACCTGGCTGCCACTTGGTTGTTTTAAA...TATGCTGCCTTTCCTCTCTCCCTCGGCTACCTGTCGGGTGGACACGTGACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp CCTTCAGTCTCTTGCCTGGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTCCCACAAGAGCTGGTaGAGCAGAGTGTTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: PSVSCLGTWVACRPQTRNSHKSW*SRVFSN
Trigger: GTTAGAGAACACTCTGCTCCACCAGCTCTTGTGGGA...ATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR TCA 90 bp TGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTCCCACACACTGCCCGTAGGTaGTCTTCATCTCACACTTGG +
Preference number: 4 (lower is better)
Translates to: WRGPRVFAGVLVRLPSFPHTARR*SSSHTW
Trigger: CCAAGTGTGAGATGAAGATCACCTACGGGCAGTGTG...TGGGAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR TCA 90 bp GCTGTCACAGGTAAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTTTAGCTGGACATaGTGTGCTTCACAAATGCTT +
Preference number: 4 (lower is better)
Translates to: AVTGKHSLRGARDGNHVERFSWT*CASQML
Trigger: AAGCATTTGTGAAGCACATCATGTCCAGCTAAACCT...CTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGTGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR TCA 90 bp TGGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTTCTGACATATCACACAGTGGACAAGGAGCATaGCCACTGAAGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: WAPGWLAAHKQGISDISHSGQGA*PLKHST
Trigger: GGTGCTGTGCTTCAGTGGTCATGCTCCTTGTCCACT...GTGTGATATGTCAGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR TCA 90 bp GCAAGTCACGTGTCCACCCGACAGGTAGCCGAGGGAGAGAGGAAAGGCAGCATACGTACAGGCAGAATATaGAAGTGGACAAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: ASHVSTRQVAEGERKGSIRTGRI*KWTRSM
Trigger: CATGCTCCTTGTCCACTTTCATATTCTGCCTGTACG...TATGCTGCCTTTCCTCTCTCCCTCGGCTACCTGTCGGGTGGACACGTGACTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp ACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCCGAAGTCCTCATAGGTaGCTGTGTCCTTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TTWRGPRVFAGVLVRLPSRSPHR*LCPCSW
Trigger: CCAAGAACAAGGACACAGGCACCTATGAGGACTTCG...GGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp ACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTCTTCATCTCACACTTaGGTGTGCGGTCGAACAGCA +
Preference number: 4 (lower is better)
Translates to: TTWRGPRVFAGVLVRLPSSSSHT*VCGRTA
Trigger: TGCTGTTCGACCGCACACCCAAGTGTGAGATGAAGA...GGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp CCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAGAGACGGCAACCACGTaGAGAGGTCCAAGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: PETATTWRGPRVFAGVLVETATT*RGPRVF
Trigger: AAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTC...TACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp GATCTCTCAAGAAGCCCTTATCTGGGCATGACAGAGGGCTCACGCTCTTGTCTTAGAGAGACAGACAGCTaGGCCCAGGGTACCACTACC +
Preference number: 4 (lower is better)
Translates to: DLSRSPYLGMTEGSRSCLRETDS*AQGTTT
Trigger: GGTAGTGGTACCCTGGGCCCAGCTGTCTGTCTCTCT...AAGACAAGAGCGTGAGCCCTCTGTCATGCCCAGATAAGGGCTTCTTGAGAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000653454.1
3UTR CAA 72 bp TGTGCCTTCAGTCTCTTGCCTGGGCACCTGGGTGGCTaGCCGCCCACAAACAAGGAATTTCTGACATATCAC +
Preference number: 4 (lower is better)
Translates to: CAFSLLPGHLGG*PPTNKEFLTYH
Trigger: GTGATATGTCAGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACTGAAGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR TCA 90 bp AGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGTTTAGCTGGACATaGTGTGCTTCACAAATGCTT +
Preference number: 4 (lower is better)
Translates to: SLRGARDGNHVERSKGFCRFSWT*CASQML
Trigger: AAGCATTTGTGAAGCACATCATGTCCAGCTAAACCT...GCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR TCA 90 bp CCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGAGGTTTAGCTGGACATaGTGTGCTTCACAAATGCTT +
Preference number: 4 (lower is better)
Translates to: PERGQRRQPRGEVQGFLQRFSWT*CASQML
Trigger: AAGCATTTGTGAAGCACATCATGTCCAGCTAAACCT...CTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp AAGCCCTTATCTGGGCATGACAGAGGGCTCACGCTCTTGTCTTCTAGTCATCTCAGCTGCCTTGGGGGCTaGCTTGGCATCATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: KPLSGHDRGLTLLSSSHLSCLGG*LGIILL
Trigger: AAGAAGGATGATGCCAAGGCAGCCCCCAAGGCAGCT...GAGATGACTAGAAGACAAGAGCGTGAGCCCTCTGTCATGCCCAGATAAGGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp ACAGGTAAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCTTGAACTCTTCAATCTaGTCAGGTGTGAACTCAATC +
Preference number: 4 (lower is better)
Translates to: TGKHSLRGARDGNHVERSLNSSI*SGVNSI
Trigger: GATTGAGTTCACACCTGAGCAGATTGAAGAGTTCAA...GGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp TCCAGAGAAAGGGAGACTCCCTTTCCCAGTCTGCTAAGTAACAGGTGCCTTCCCCCATTGGAGTCCTCTTaGCCAGCCATCAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: SRERETPFPSLLSNRCLPPLESS*PAINFS
Trigger: GGAGAAGTTGATGGCTGGGCAAGAGGACTCCAATGG...GGGAAGGCACCTGTTACTTAGCAGACTGGGAAAGGGAGTCTCCCTTTCTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp CTTTATTATACTGGAACAGCTTGTGCCTTCAGTCTCTTGCCTGGGCACCTGGGTGGCACCTGGGTGGCTTaGCGCCCACAAACAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LYYTGTACAFSLLPGHLGGTWVA*RPQTRN
Trigger: ATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCC...ACCCAGGTGCCCAGGCAAGAGACTGAAGGCACAAGCTGTTCCAGTATAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp TGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCCCTGGGGTACAGAGAGGGATGTaGAGAGAAGAATGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: WCQHHTWEMRRPCTAFPGVQRGM*REECRK
Trigger: CTTTCTGCATTCTTCTCTCCACATCCCTCTCTGTAC...CCCAGGGAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000395869.5
CDS-3UTR CCA 90 bp CCTTCAGTCTCTTGCCTGGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATGTACAGAGAGGGATGTaGAGAGAAGAATGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PSVSCLGTWVACRPQTRNVQRGM*REECRK
Trigger: CTTTCTGCATTCTTCTCTCCACATCCCTCTCTGTAC...ATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000653454.1
CDS-3UTR CCA 90 bp CTTTATTATACTGGAACAGCTTGTGCCTTCAGTCTCTTGCCTGGGCACCTGGGTCCTTGGGGGCTGCCTTaGCATCATCCTTCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LYYTGTACAFSLLPGHLGPWGLP*HHPSWA
Trigger: AGCCCAAGAAGGATGATGCCAAGGCAGCCCCCAAGG...ACCCAGGTGCCCAGGCAAGAGACTGAAGGCACAAGCTGTTCCAGTATAATAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp TGGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTTCTGACATATCACACCTTGGTAGTCAAGTGTaGGCCACCACTGAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: WAPGWLAAHKQGISDISHLGSQV*ATTEFR
Trigger: CCTGAACTCAGTGGTGGCCCACACTTGACTACCAAG...GTGTGATATGTCAGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR CAA 72 bp AAGCCCTTATCTGGGCATGACAGAGGGCTCACGCTCTaGTCTTCTAGTCATCTCTCACAGTGTCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KPLSGHDRGLTL*SSSHLSQCPFS
Trigger: GCTGAAGGGACACTGTGAGAGATGACTAGAAGACAAGAGCGTGAGCCCTCTGTCATGCCCAGATAAGGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR TCA 90 bp GATCTCTCAAGAAGCCCTTATCTGGGCATGACAGAGGGCTCACGCTCTTGTCTTCACACTGCCCGTAGGTaGTCTTCATCTCACACTTGG +
Preference number: 4 (lower is better)
Translates to: DLSRSPYLGMTEGSRSCLHTARR*SSSHTW
Trigger: CCAAGTGTGAGATGAAGATCACCTACGGGCAGTGTG...AAGACAAGAGCGTGAGCCCTCTGTCATGCCCAGATAAGGGCTTCTTGAGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR TCA 90 bp TTGCTTGAGCCCATGAGTCACGAGTTCATATCCAGCCTGGGCAACATGGAGAAAGGCAGGAGGATTGCTTaGGCCCATGAGTCACGAGTT +
Preference number: 4 (lower is better)
Translates to: LLEPMSHEFISSLGNMEKGRRIA*AHESRV
Trigger: AACTCGTGACTCATGGGCTCAAGCAATCCTCCTGCC...TTTCTCCATGTTGCCCAGGCTGGATATGAACTCGTGACTCATGGGCTCAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp CCGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCCCTTGAACTCTTCAATCTaGTCAGGTGTGAACTCAATC +
Preference number: 4 (lower is better)
Translates to: PLVSASHMGDETSLHSLPLNSSI*SGVNSI
Trigger: GATTGAGTTCACACCTGAGCAGATTGAAGAGTTCAA...GGGAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp CACAGGGAGATGTTTAAGCCTCCGGATGACTGCAGGCAGGCCTGGCCTCCCACATTGAACTCTTCAATCTaGTCAGGTGTGAACTCAATC +
Preference number: 4 (lower is better)
Translates to: HREMFKPPDDCRQAWPPTLNSSI*SGVNSI
Trigger: GATTGAGTTCACACCTGAGCAGATTGAAGAGTTCAA...TGTGGGAGGCCAGGCCTGCCTGCAGTCATCCGGAGGCTTAAACATCTCCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp TGTCTTCTAGTCATCTCTCACAGTGTCCCTTCAGCTCCTAATTCTGTATGGCCTGACACGGAGCACTTCTaGCTGTGTGGGGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: CLLVISHSVPSAPNSVWPDTEHF*LCGVLA
Trigger: GGCCAGAACCCCACACAGGCAGAAGTGCTCCGTGTC...AGGCCATACAGAATTAGGAGCTGAAGGGACACTGTGAGAGATGACTAGAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp TCCAGAGAAAGGGAGACTCCCTTTCCCAGTCTGCTAAGTAACAGGTGCCTTCCCCGAAGTCCTCATAGGTaGCTGTGTCCTTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SRERETPFPSLLSNRCLPRSPHR*LCPCSW
Trigger: CCAAGAACAAGGACACAGGCACCTATGAGGACTTCG...GGGAAGGCACCTGTTACTTAGCAGACTGGGAAAGGGAGTCTCCCTTTCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp AAGCCCTTATCTGGGCATGACAGAGGGCTCACGCTCTTGTCTTCTAGTCATCTCCCATTGGAGTCCTCTTaGCCAGCCATCAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: KPLSGHDRGLTLLSSSHLPLESS*PAINFS
Trigger: GGAGAAGTTGATGGCTGGGCAAGAGGACTCCAATGG...GAGATGACTAGAAGACAAGAGCGTGAGCCCTCTGTCATGCCCAGATAAGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp CGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCCCTGATGTGCTTCACAAATaGTTCATAGTTGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: RWCQHHTWEMRRPCTAFPDVLHK*FIVDAA
Trigger: GGCTGCATCAACTATGAAGCATTTGTGAAGCACATC...AGGGAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp GCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCGAGGGAGGAATGTTCTaGTCTTCCACAGCTACATTT +
Preference number: 4 (lower is better)
Translates to: ATTWRGPRVFAGVLVRLPEGGMF*SSTATF
Trigger: AAATGTAGCTGTGGAAGAGCAGAACATTCCTCCCTC...GGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000662933.1
CDS-3UTR CCA 90 bp TGTCTTCTAGTCATCTCTCACAGTGTCCCTTCAGCTCCTAATTCTGTATGGCCTGAGCTGGAGCTGCCTTaGGGGCTGCCTTGGCATCAT +
Preference number: 4 (lower is better)
Translates to: CLLVISHSVPSAPNSVWPELELP*GLPWHH
Trigger: ATGATGCCAAGGCAGCCCCCAAGGCAGCTCCAGCTC...AGGCCATACAGAATTAGGAGCTGAAGGGACACTGTGAGAGATGACTAGAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp CGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCCCTTTGAACTCTTCAATCTaGTCAGGTGTGAACTCAATC +
Preference number: 4 (lower is better)
Translates to: RWCQHHTWEMRRPCTAFPLNSSI*SGVNSI
Trigger: GATTGAGTTCACACCTGAGCAGATTGAAGAGTTCAA...AGGGAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp AAGCCCTTATCTGGGCATGACAGAGGGCTCACGCTCTTGTCTTCTAGTCATCTCCGAAGTCCTCATAGGTaGCTGTGTCCTTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KPLSGHDRGLTLLSSSHLRSPHR*LCPCSW
Trigger: CCAAGAACAAGGACACAGGCACCTATGAGGACTTCG...GAGATGACTAGAAGACAAGAGCGTGAGCCCTCTGTCATGCCCAGATAAGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp ACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCGATGTGCTTCACAAATaGTTCATAGTTGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: TTWRGPRVFAGVLVRLPSDVLHK*FIVDAA
Trigger: GGCTGCATCAACTATGAAGCATTTGTGAAGCACATC...GGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR GCA 90 bp CAGTCTCTTGCCTGGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTTCTGATGTGCTTCACAAATaGTTCATAGTTGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: QSLAWAPGWLAAHKQGISDVLHK*FIVDAA
Trigger: GGCTGCATCAACTATGAAGCATTTGTGAAGCACATC...AGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp AACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCGTACAGAGAGGGATGTaGAGAGAAGAATGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: NHVERSKGFCRSLGKAPLVQRGM*REECRK
Trigger: CTTTCTGCATTCTTCTCTCCACATCCCTCTCTGTAC...GAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000395869.5
CDS-3UTR CCA 90 bp TGTCTTCTAGTCATCTCTCACAGTGTCCCTTCAGCTCCTAATTCTGTATGGCCTCCTTGGGGGCTGCCTTaGCATCATCCTTCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: CLLVISHSVPSAPNSVWPPWGLP*HHPSWA
Trigger: AGCCCAAGAAGGATGATGCCAAGGCAGCCCCCAAGG...AGGCCATACAGAATTAGGAGCTGAAGGGACACTGTGAGAGATGACTAGAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp TGTCTTCTAGTCATCTCTCACAGTGTCCCTTCAGCTCCTAATTCTGTATGGCCTGAGCTCTTCCTGTCTTaGCTTCCCCAGGACACGGAG +
Preference number: 4 (lower is better)
Translates to: CLLVISHSVPSAPNSVWPELFLS*LPQDTE
Trigger: CTCCGTGTCCTGGGGAAGCCAAGACAGGAAGAGCTC...AGGCCATACAGAATTAGGAGCTGAAGGGACACTGTGAGAGATGACTAGAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp ACTACCACCAAGACGCGGAGACCGGTAGTGGCCCTGAATGCCTGGACACGCTGCTTTTCTTTATTATACTaGAACAGCTTGTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: TTTKTRRPVVALNAWTRCFSLLY*NSLCLQ
Trigger: CTGAAGGCACAAGCTGTTCCAGTATAATAAAGAAAA...GCAGCGTGTCCAGGCATTCAGGGCCACTACCGGTCTCCGCGTCTTGGTGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR CAA 72 bp GTAGTGGCCCTGAATGCCTGGACACGCTGCTATTTATaGTATTCTAGGCAAGGGGGCAGGGTAAGGAGTATG +
Preference number: 4 (lower is better)
Translates to: VVALNAWTRCYL*YSRQGGRVRSM
Trigger: CATACTCCTTACCCTGCCCCCTTGCCTAGAATACAATAAATAGCAGCGTGTCCAGGCATTCAGGGCCACTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp TGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTCCCAGATGTGCTTCACAAATaGTTCATAGTTGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: WRGPRVFAGVLVRLPSFPDVLHK*FIVDAA
Trigger: GGCTGCATCAACTATGAAGCATTTGTGAAGCACATC...TGGGAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CCA 90 bp TTGCTTGAGCCCATGAGTCACGAGTTCATATCCAGCCTGGGCAACATGGAGAAATCTTCATCTCACACTTaGGTGTGCGGTCGAACAGCA +
Preference number: 4 (lower is better)
Translates to: LLEPMSHEFISSLGNMEKSSSHT*VCGRTA
Trigger: TGCTGTTCGACCGCACACCCAAGTGTGAGATGAAGA...TTTCTCCATGTTGCCCAGGCTGGATATGAACTCGTGACTCATGGGCTCAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
3UTR CAA 72 bp GCCGCCCACAAACAAGGAATTTCTGACATATCACACTaGGTAGTCAAGTGTGGGCCACCACTGAGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: AAHKQGISDISH*VVKCGPPLSSG
Trigger: ACCTGAACTCAGTGGTGGCCCACACTTGACTACCAAGTGTGATATGTCAGAAATTCCTTGTTTGTGGGCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR TCA 90 bp GCCTGGCCTCCCACAAGAGCTGGTGGAGCAGAGTGTTCTCTAACTCTTCCAGAGCAAACAAGGAATTTCTaGCATATCACACTTGGTAGT +
Preference number: 4 (lower is better)
Translates to: AWPPTRAGGAECSLTLPEQTRNF*HITLGS
Trigger: ACTACCAAGTGTGATATGTCAGAAATTCCTTGTTTG...CTCTGGAAGAGTTAGAGAACACTCTGCTCCACCAGCTCTTGTGGGAGGCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp CTACTGCTATCTTCTAAGAACTTAAAAGGAGGAGCCAGGCGTACAGGCAGAATAAGCTGCCTTGGGGGCTaGCTTGGCATCATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLLSSKNLKGGARRTGRISCLGG*LGIILL
Trigger: AAGAAGGATGATGCCAAGGCAGCCCCCAAGGCAGCT...TATTCTGCCTGTACGCCTGGCTCCTCCTTTTAAGTTCTTAGAAGATAGCAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp GATCTCTCAAGAAGCCCTTATCTGGGCATGACAGAGGGCTCACGCTCTTGTCTTGAGGGAGGAATGTTCTaGTCTTCCACAGCTACATTT +
Preference number: 4 (lower is better)
Translates to: DLSRSPYLGMTEGSRSCLEGGMF*SSTATF
Trigger: AAATGTAGCTGTGGAAGAGCAGAACATTCCTCCCTC...AAGACAAGAGCGTGAGCCCTCTGTCATGCCCAGATAAGGGCTTCTTGAGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654597.1
CDS-3UTR CCA 90 bp TGTCTTCTAGTCATCTCTCACAGTGTCCCTTCAGCTCCTAATTCTGTATGGCCTCTTGGTAGTCAAGTGTaGGCCACCACTGAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CLLVISHSVPSAPNSVWPLGSQV*ATTEFR
Trigger: CCTGAACTCAGTGGTGGCCCACACTTGACTACCAAG...AGGCCATACAGAATTAGGAGCTGAAGGGACACTGTGAGAGATGACTAGAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp CTTTATTATACTGGAACAGCTTGTGCCTTCAGTCTCTTGCCTGGGCACCTGGGTGATGTGCTTCACAAATaGTTCATAGTTGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: LYYTGTACAFSLLPGHLGDVLHK*FIVDAA
Trigger: GGCTGCATCAACTATGAAGCATTTGTGAAGCACATC...ACCCAGGTGCCCAGGCAAGAGACTGAAGGCACAAGCTGTTCCAGTATAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp CTACTGCTATCTTCTAAGAACTTAAAAGGAGGAGCCAGGCGTACAGGCAGAATAGAGAAATCCTGTACCTaGGCACGAGGTTTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LLLSSKNLKGGARRTGRIEKSCT*ARGLAG
Trigger: TCCAGCTAAACCTCGTGCCCAGGTACAGGATTTCTC...TATTCTGCCTGTACGCCTGGCTCCTCCTTTTAAGTTCTTAGAAGATAGCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR GCA 90 bp TTGCTTGAGCCCATGAGTCACGAGTTCATATCCAGCCTGGGCAACATGGAGAAATTGAACTCTTCAATCTaGTCAGGTGTGAACTCAATC +
Preference number: 4 (lower is better)
Translates to: LLEPMSHEFISSLGNMEKLNSSI*SGVNSI
Trigger: GATTGAGTTCACACCTGAGCAGATTGAAGAGTTCAA...TTTCTCCATGTTGCCCAGGCTGGATATGAACTCGTGACTCATGGGCTCAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR TCA 90 bp CTTTATTATACTGGAACAGCTTGTGCCTTCAGTCTCTTGCCTGGGCACCTGGGTCAAACAAGGAATTTCTaGCATATCACACTTGGTAGT +
Preference number: 4 (lower is better)
Translates to: LYYTGTACAFSLLPGHLGQTRNF*HITLGS
Trigger: ACTACCAAGTGTGATATGTCAGAAATTCCTTGTTTG...ACCCAGGTGCCCAGGCAAGAGACTGAAGGCACAAGCTGTTCCAGTATAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR TCA 90 bp CTACTGCTATCTTCTAAGAACTTAAAAGGAGGAGCCAGGCGTACAGGCAGAATAAGGTTTAGCTGGACATaGTGTGCTTCACAAATGCTT +
Preference number: 4 (lower is better)
Translates to: LLLSSKNLKGGARRTGRIRFSWT*CASQML
Trigger: AAGCATTTGTGAAGCACATCATGTCCAGCTAAACCT...TATTCTGCCTGTACGCCTGGCTCCTCCTTTTAAGTTCTTAGAAGATAGCAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CCA 90 bp CTTTATTATACTGGAACAGCTTGTGCCTTCAGTCTCTTGCCTGGGCACCTGGGTTTTTCTTTATTATACTaGAACAGCTTGTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LYYTGTACAFSLLPGHLGFSLLY*NSLCLQ
Trigger: CTGAAGGCACAAGCTGTTCCAGTATAATAAAGAAAA...ACCCAGGTGCCCAGGCAAGAGACTGAAGGCACAAGCTGTTCCAGTATAATAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR TCA 90 bp TCACTAATTTTGCTACTGCTATCTTCTAAGAACTTAAAAGGAGGAGCCAGGCGTAGGTTTAGCTGGACATaGTGTGCTTCACAAATGCTT +
Preference number: 4 (lower is better)
Translates to: SLILLLLSSKNLKGGARRRFSWT*CASQML
Trigger: AAGCATTTGTGAAGCACATCATGTCCAGCTAAACCT...ACGCCTGGCTCCTCCTTTTAAGTTCTTAGAAGATAGCAGTAGCAAAATTAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CAA 90 bp ACAGGTAAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCGCCTTGGGGGCTGCCTaGGCATCATCCTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: TGKHSLRGARDGNHVERSALGAA*ASSFLG
Trigger: GCCCAAGAAGGATGATGCCAAGGCAGCCCCCAAGGC...GGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS CCA 90 bp GCCTGTGGACTAAGGCAGGAAAGCCCGGCCACGCCGGCCTTCTTCTaGGCTCTTGTTACCTGGCGTCTTCCGTGTGTCCGCCTTCCTATG +
Preference number: 5 (lower is better)
Translates to: ACGLRQESPATPAFF*ALVTWRLPCVRLPM
Trigger: CATAGGAAGGCGGACACACGGAAGACGCCAGGTAACAAGAGCCCAGAAGAAGGCCGGCGTGGCCGGGCTTTCCTGCCTTAGTCCACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431168.1
CDS TCA 90 bp TCTCCCTTCCCCCAGCCAAGGAGAATGCGGGGAAGATATGGGCCCTaGCTTCTGAGGAGCCTGTGGACTAAGGCAGGAAAGCCCGGCCAC +
Preference number: 5 (lower is better)
Translates to: SPFPQPRRMRGRYGP*LLRSLWTKAGKPGH
Trigger: GTGGCCGGGCTTTCCTGCCTTAGTCCACAGGCTCCTCAGAAGTCAGGGCCCATATCTTCCCCGCATTCTCCTTGGCTGGGGGAAGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431168.1
CDS-3UTR CAA 90 bp ACAGGTAAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCCCCATGACAGTGCCATaGCCCTCCTTGTCGAAGACC +
Preference number: 5 (lower is better)
Translates to: TGKHSLRGARDGNHVERSPMTVP*PSLSKT
Trigger: GGTCTTCGACAAGGAGGGCAATGGCACTGTCATGGG...GGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp AGAGAGACAGACAGCTGGGCCCAGGGTACCACTACCACCAAGACGCGGAGACCGCCCATGACAGTGCCATaGCCCTCCTTGTCGAAGACC +
Preference number: 5 (lower is better)
Translates to: RETDSWAQGTTTTKTRRPPMTVP*PSLSKT
Trigger: GGTCTTCGACAAGGAGGGCAATGGCACTGTCATGGG...CGGTCTCCGCGTCTTGGTGGTAGTGGTACCCTGGGCCCAGCTGTCTGTCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000653454.1
CDS-3UTR CAA 90 bp AACAGCTTGTGCCTTCAGTCTCTTGCCTGGGCACCTGGGTGGCTTGCCGCCCACCCCATGACAGTGCCATaGCCCTCCTTGTCGAAGACC +
Preference number: 5 (lower is better)
Translates to: NSLCLQSLAWAPGWLAAHPMTVP*PSLSKT
Trigger: GGTCTTCGACAAGGAGGGCAATGGCACTGTCATGGG...GTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACTGAAGGCACAAGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS CCA 90 bp CAGGAAAGCCCGGCCACGCCGGCCTTCTTCTGGGCTCTTGTTACCTaGCGTCTTCCGTGTGTCCGCCTTCCTATGAATGTCAGCCATCAC +
Preference number: 5 (lower is better)
Translates to: QESPATPAFFWALVT*RLPCVRLPMNVSHH
Trigger: GTGATGGCTGACATTCATAGGAAGGCGGACACACGGAAGACGCCAGGTAACAAGAGCCCAGAAGAAGGCCGGCGTGGCCGGGCTTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431168.1
CDS-3UTR CAA 90 bp AGTCTCTTGCCTGGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTTCTGGCCTTGGGGGCTGCCTaGGCATCATCCTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SLLPGHLGGLPPTNKEFLALGAA*ASSFLG
Trigger: GCCCAAGAAGGATGATGCCAAGGCAGCCCCCAAGGC...CAGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CAA 90 bp GCCTGGCCTCCCACAAGAGCTGGTGGAGCAGAGTGTTCTCTAACTCTTCCAGAGGGGCACCTGGGTGGCTaGCCGCCCACAAACAAGGAA +
Preference number: 5 (lower is better)
Translates to: AWPPTRAGGAECSLTLPEGHLGG*PPTNKE
Trigger: TTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCC...CTCTGGAAGAGTTAGAGAACACTCTGCTCCACCAGCTCTTGTGGGAGGCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CAA 90 bp AACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCGCCTTGGGGGCTGCCTaGGCATCATCCTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: NHVERSKGFCRSLGKAPLALGAA*ASSFLG
Trigger: GCCCAAGAAGGATGATGCCAAGGCAGCCCCCAAGGC...GAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp AAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTATCTTCATCTCACACTaGGGTGTGCGGTCGAACAGC +
Preference number: 5 (lower is better)
Translates to: KHSLRGARDGNHVERSKGIFISH*GVRSNS
Trigger: GCTGTTCGACCGCACACCCAAGTGTGAGATGAAGAT...ACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS CCA 90 bp CCCAGGGTGGTAGAAGGAGTAAGGGCAATGGTACAGGCCGAGGGCTaGTGGCTGGAAGCATCGAGGGTGAGCACAAGTGTGCATGTTTGT +
Preference number: 5 (lower is better)
Translates to: PRVVEGVRAMVQAEG*WLEASRVSTSVHVC
Trigger: ACAAACATGCACACTTGTGCTCACCCTCGATGCTTCCAGCCACCAGCCCTCGGCCTGTACCATTGCCCTTACTCCTTCTACCACCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655244.1
CDS-3UTR CAA 90 bp TGGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTTCTGACATATCACACGCCTTGGGGGCTGCCTaGGCATCATCCTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: WAPGWLAAHKQGISDISHALGAA*ASSFLG
Trigger: GCCCAAGAAGGATGATGCCAAGGCAGCCCCCAAGGC...GTGTGATATGTCAGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CAA 90 bp CACAGGGAGATGTTTAAGCCTCCGGATGACTGCAGGCAGGCCTGGCCTCCCACAATCTTCATCTCACACTaGGGTGTGCGGTCGAACAGC +
Preference number: 5 (lower is better)
Translates to: HREMFKPPDDCRQAWPPTIFISH*GVRSNS
Trigger: GCTGTTCGACCGCACACCCAAGTGTGAGATGAAGAT...TGTGGGAGGCCAGGCCTGCCTGCAGTCATCCGGAGGCTTAAACATCTCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CAA 90 bp ACGACTCCAGGCCGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCGTTTTTGCAGGAGTCTaGGTAAGGCTCCCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TTPGRWCQHHTWEMRRPCVFAGV*VRLPSF
Trigger: GAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAAC...GCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCGGCCTGGAGTCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp AGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCGTTTTTGCAGGAGTCTaGGTAAGGCTCCCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SLRGARDGNHVERSKGFCVFAGV*VRLPSF
Trigger: GAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAAC...GCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp CGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCCCTATCTTCATCTCACACTaGGGTGTGCGGTCGAACAGC +
Preference number: 5 (lower is better)
Translates to: RWCQHHTWEMRRPCTAFPIFISH*GVRSNS
Trigger: GCTGTTCGACCGCACACCCAAGTGTGAGATGAAGAT...AGGGAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp TGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTCCCACCCATGACAGTGCCATaGCCCTCCTTGTCGAAGACC +
Preference number: 5 (lower is better)
Translates to: WRGPRVFAGVLVRLPSFPPMTVP*PSLSKT
Trigger: GGTCTTCGACAAGGAGGGCAATGGCACTGTCATGGG...TGGGAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp CCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTACCCATGACAGTGCCATaGCCCTCCTTGTCGAAGACC +
Preference number: 5 (lower is better)
Translates to: PETATTWRGPRVFAGVLVPMTVP*PSLSKT
Trigger: GGTCTTCGACAAGGAGGGCAATGGCACTGTCATGGG...TACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp AAGCCCTTATCTGGGCATGACAGAGGGCTCACGCTCTTGTCTTCTAGTCATCTCGGGCACCTGGGTGGCTaGCCGCCCACAAACAAGGAA +
Preference number: 5 (lower is better)
Translates to: KPLSGHDRGLTLLSSSHLGHLGG*PPTNKE
Trigger: TTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCC...GAGATGACTAGAAGACAAGAGCGTGAGCCCTCTGTCATGCCCAGATAAGGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CAA 90 bp ACAGGTAAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAGCATGAAGGCTTCCTaGAACTCTTCAATCTGCTCA +
Preference number: 5 (lower is better)
Translates to: TGKHSLRGARDGNHVERSSMKAS*NSSICS
Trigger: TGAGCAGATTGAAGAGTTCAAGGAAGCCTTCATGCT...GGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp AAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTAGCATGAAGGCTTCCTaGAACTCTTCAATCTGCTCA +
Preference number: 5 (lower is better)
Translates to: KHSLRGARDGNHVERSKGSMKAS*NSSICS
Trigger: TGAGCAGATTGAAGAGTTCAAGGAAGCCTTCATGCT...ACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp TCCAGGCCGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCTCCATCATCTTGGTATaGAGCTCTTCCTGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: SRPLVSASHMGDETSLHSSIILV*SSSCLG
Trigger: GCCAAGACAGGAAGAGCTCAATACCAAGATGATGGA...GCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCGGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp AAGGCCGGCAAGAAGCCATTTATTCATGAGGCCCATGGGGTGGGGACAGAGCTGGTTTTTGCAGGAGTCTaGGTAAGGCTCCCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: KAGKKPFIHEAHGVGTELVFAGV*VRLPSF
Trigger: GAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAAC...CAGCTCTGTCCCCACCCCATGGGCCTCATGAATAAATGGCTTCTTGCCGGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000292327.6
ENST00000395869.5
CDS-3UTR CAA 90 bp AAGCACAGCCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTGGTGTGAACTCAATCTaGATCTTGGAAGCATCAAAC +
Preference number: 5 (lower is better)
Translates to: KHSLRGARDGNHVERSKGGVNSI*ILEASN
Trigger: GTTTGATGCTTCCAAGATCAAGATTGAGTTCACACC...ACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp AACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCATCTTCATCTCACACTaGGGTGTGCGGTCGAACAGC +
Preference number: 5 (lower is better)
Translates to: NHVERSKGFCRSLGKAPLIFISH*GVRSNS
Trigger: GCTGTTCGACCGCACACCCAAGTGTGAGATGAAGAT...GAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp TGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCCCTGGGTCCATCATCTTGGTATaGAGCTCTTCCTGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: WCQHHTWEMRRPCTAFPGSIILV*SSSCLG
Trigger: GCCAAGACAGGAAGAGCTCAATACCAAGATGATGGA...CCCAGGGAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp GCCTGGCCTCCCACAAGAGCTGGTGGAGCAGAGTGTTCTCTAACTCTTCCAGAGAGAGGGCTCACGCTCTaGTCTTCTAGTCATCTCTCA +
Preference number: 5 (lower is better)
Translates to: AWPPTRAGGAECSLTLPERGLTL*SSSHLS
Trigger: TGAGAGATGACTAGAAGACAAGAGCGTGAGCCCTCT...CTCTGGAAGAGTTAGAGAACACTCTGCTCCACCAGCTCTTGTGGGAGGCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CAA 90 bp TGGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTTCTGACATATCACACATCTTCATCTCACACTaGGGTGTGCGGTCGAACAGC +
Preference number: 5 (lower is better)
Translates to: WAPGWLAAHKQGISDISHIFISH*GVRSNS
Trigger: GCTGTTCGACCGCACACCCAAGTGTGAGATGAAGAT...GTGTGATATGTCAGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CAA 90 bp CAGTCTCTTGCCTGGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTTCTTCCATCATCTTGGTATaGAGCTCTTCCTGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: QSLAWAPGWLAAHKQGISSIILV*SSSCLG
Trigger: GCCAAGACAGGAAGAGCTCAATACCAAGATGATGGA...AGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CAA 90 bp CCTGAGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGTCAAAGTCCATCATCTaGGTATTGAGCTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: PERGQRRQPRGEVQGFLQSKSII*VLSSSC
Trigger: ACAGGAAGAGCTCAATACCAAGATGATGGACTTTGA...CTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp GGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTAACTCAATCTTGATCTaGGAAGCATCAAACTCGACC +
Preference number: 5 (lower is better)
Translates to: GARDGNHVERSKGFCRSLNSILI*EASNST
Trigger: GGTCGAGTTTGATGCTTCCAAGATCAAGATTGAGTT...AAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp AGAGGGGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTGGTGTGAACTCAATCTaGATCTTGGAAGCATCAAAC +
Preference number: 5 (lower is better)
Translates to: RGARDGNHVERSKGFCRSGVNSI*ILEASN
Trigger: GTTTGATGCTTCCAAGATCAAGATTGAGTTCACACC...ACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp GGCCAGAGACGGCAACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGGGTGTGAACTCAATCTaGATCTTGGAAGCATCAAAC +
Preference number: 5 (lower is better)
Translates to: GQRRQPRGEVQGFLQESWGVNSI*ILEASN
Trigger: GTTTGATGCTTCCAAGATCAAGATTGAGTTCACACC...CCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTTGCCGTCTCTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp TGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCCTTCCCATCCATCATCTTGGTATaGAGCTCTTCCTGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: WRGPRVFAGVLVRLPSFPSIILV*SSSCLG
Trigger: GCCAAGACAGGAAGAGCTCAATACCAAGATGATGGA...TGGGAAGGAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp CGCTGGTGTCAGCATCACACATGGGAGATGAGACGTCCCTGCACAGCCTTCCCTTCAAAGTCCATCATCTaGGTATTGAGCTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: RWCQHHTWEMRRPCTAFPSKSII*VLSSSC
Trigger: ACAGGAAGAGCTCAATACCAAGATGATGGACTTTGA...AGGGAAGGCTGTGCAGGGACGTCTCATCTCCCATGTGTGATGCTGACACCAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp CACCAAGACGCGGAGACCGGTAGTGGCCCTGAATGCCTGGACACGCTGCTATTTTCAAAGTCCATCATCTaGGTATTGAGCTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: HQDAETGSGPECLDTLLFSKSII*VLSSSC
Trigger: ACAGGAAGAGCTCAATACCAAGATGATGGACTTTGA...AAATAGCAGCGTGTCCAGGCATTCAGGGCCACTACCGGTCTCCGCGTCTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CAA 90 bp AGTCTCTTGCCTGGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTTCTGGGTGTGAACTCAATCTaGATCTTGGAAGCATCAAAC +
Preference number: 5 (lower is better)
Translates to: SLLPGHLGGLPPTNKEFLGVNSI*ILEASN
Trigger: GTTTGATGCTTCCAAGATCAAGATTGAGTTCACACC...CAGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CAA 90 bp CAGTCTCTTGCCTGGGCACCTGGGTGGCTTGCCGCCCACAAACAAGGAATTTCTGGTGTGAACTCAATCTaGATCTTGGAAGCATCAAAC +
Preference number: 5 (lower is better)
Translates to: QSLAWAPGWLAAHKQGISGVNSI*ILEASN
Trigger: GTTTGATGCTTCCAAGATCAAGATTGAGTTCACACC...AGAAATTCCTTGTTTGTGGGCGGCAAGCCACCCAGGTGCCCAGGCAAGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CAA 90 bp TCCAGAGAAAGGGAGACTCCCTTTCCCAGTCTGCTAAGTAACAGGTGCCTTCCCAGCATGAAGGCTTCCTaGAACTCTTCAATCTGCTCA +
Preference number: 5 (lower is better)
Translates to: SRERETPFPSLLSNRCLPSMKAS*NSSICS
Trigger: TGAGCAGATTGAAGAGTTCAAGGAAGCCTTCATGCT...GGGAAGGCACCTGTTACTTAGCAGACTGGGAAAGGGAGTCTCCCTTTCTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CAA 90 bp AACCACGTGGAGAGGTCCAAGGGTTTTTGCAGGAGTCTTGGTAAGGCTCCCCTCTCAAAGTCCATCATCTaGGTATTGAGCTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: NHVERSKGFCRSLGKAPLSKSII*VLSSSC
Trigger: ACAGGAAGAGCTCAATACCAAGATGATGGACTTTGA...GAGGGGAGCCTTACCAAGACTCCTGCAAAAACCCTTGGACCTCTCCACGTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000662933.1
CDS-3UTR CAA 90 bp GATCTCTCAAGAAGCCCTTATCTGGGCATGACAGAGGGCTCACGCTCTTGTCTTAGCATGAAGGCTTCCTaGAACTCTTCAATCTGCTCA +
Preference number: 5 (lower is better)
Translates to: DLSRSPYLGMTEGSRSCLSMKAS*NSSICS
Trigger: TGAGCAGATTGAAGAGTTCAAGGAAGCCTTCATGCT...AAGACAAGAGCGTGAGCCCTCTGTCATGCCCAGATAAGGGCTTCTTGAGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CAA 90 bp TCACTAATTTTGCTACTGCTATCTTCTAAGAACTTAAAAGGAGGAGCCAGGCGTTCCATCATCTTGGTATaGAGCTCTTCCTGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: SLILLLLSSKNLKGGARRSIILV*SSSCLG
Trigger: GCCAAGACAGGAAGAGCTCAATACCAAGATGATGGA...ACGCCTGGCTCCTCCTTTTAAGTTCTTAGAAGATAGCAGTAGCAAAATTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS-3UTR CAA 90 bp CTACTGCTATCTTCTAAGAACTTAAAAGGAGGAGCCAGGCGTACAGGCAGAATATCAAAGTCCATCATCTaGGTATTGAGCTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: LLLSSKNLKGGARRTGRISKSII*VLSSSC
Trigger: ACAGGAAGAGCTCAATACCAAGATGATGGACTTTGA...TATTCTGCCTGTACGCCTGGCTCCTCCTTTTAAGTTCTTAGAAGATAGCAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653454.1
ENST00000654597.1
CDS CCA 72 bp CTAAGGCAGGAAAGCCCGGCCACGCCGGCCTTCTTCTaGGCTCTTGTTACCTGGCGTCTTCCGTGTGTCCGC +
Preference number: 6 (lower is better)
Translates to: LRQESPATPAFF*ALVTWRLPCVR
Trigger: GCGGACACACGGAAGACGCCAGGTAACAAGAGCCCAGAAGAAGGCCGGCGTGGCCGGGCTTTCCTGCCTTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431168.1
CDS CAA 72 bp AGGAAAGCCCGGCCACGCCGGCCTTCTTCTGGGCTCTaGTTACCTGGCGTCTTCCGTGTGTCCGCCTTCCTA +
Preference number: 6 (lower is better)
Translates to: RKARPRRPSSGL*LPGVFRVSAFL
Trigger: TAGGAAGGCGGACACACGGAAGACGCCAGGTAACAAGAGCCCAGAAGAAGGCCGGCGTGGCCGGGCTTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431168.1
CDS TCA 72 bp CCAGCGCCCGCAGGACATCCCCACACTGCCCGTAGGTaGTCTTCATCTCACACTTGGGTGTGCGGTCGAACA +
Preference number: 6 (lower is better)
Translates to: PAPAGHPHTARR*SSSHTWVCGRT
Trigger: TGTTCGACCGCACACCCAAGTGTGAGATGAAGATCACCTACGGGCAGTGTGGGGATGTCCTGCGGGCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000292327.6
ENST00000395869.5
ENST00000653454.1
ENST00000654597.1
ENST00000655244.1
ENST00000662933.1
ENST00000664891.1
CDS CCA 72 bp GTAGAAGGAGTAAGGGCAATGGTACAGGCCGAGGGCTaGTGGCTGGAAGCATCGAGGGTGAGCACAAGTGTG +
Preference number: 6 (lower is better)
Translates to: VEGVRAMVQAEG*WLEASRVSTSV
Trigger: CACACTTGTGCTCACCCTCGATGCTTCCAGCCACCAGCCCTCGGCCTGTACCATTGCCCTTACTCCTTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655244.1
CDS GCA 72 bp TATGAATGTCAGCCATCACAGGAGGGAGGAATGTTCTaGTCTTCCACAGCTACATTTTCCCAGGACATCCCG +
Preference number: 6 (lower is better)
Translates to: YECQPSQEGGMF*SSTATFSQDIP
Trigger: CGGGATGTCCTGGGAAAATGTAGCTGTGGAAGAGCAGAACATTCCTCCCTCCTGTGATGGCTGACATTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431168.1
ENST00000654597.1
ENST00000662933.1