RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYH3 (Homo sapiens)

Ensembl gene IDs: ENSG00000109063

Ensembl transcript IDs: ENST00000577963.1, ENST00000579928.2, ENST00000582580.1, ENST00000583535.6

Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACGGGCCCTCTCCGTCTaGTCCAGAGTAGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGRALSV*SRVARS
Trigger: GCTGCGGGCTACTCTGGAGCAGACGGAGAGGGCCCG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCTATCTGCGTGGAGGTaGCGCCTCCCGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGILSAWR*RLPPPP
Trigger: TGGAGGAGGCGGGAGGCGTCACCTCCACGCAGATAG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTCATCCAAGGCCTGCTaGTGCGCCTCTTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGISSKAC*CASWRA
Trigger: GGCCCTCCAAGAGGCGCACCAGCAGGCCTTGGATGA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCTGTCTTCGCGCGGGTaGCCCTCTCCGCCTCTATCT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGILSSRG*PSPPLS
Trigger: AGATAGAGGCGGAGAGGGCCACCCGCGCGAAGACAG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTGTCAGCCACTTCTGTaGCATCCGGCTCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGICQPLL*HPARPA
Trigger: AGCAGGCCGAGCCGGATGGCACAGAAGTGGCTGACA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAAGGTCATCCAAGGCCTaGTGGTGCGCCTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGRSSKA*WCASWR
Trigger: CCTCCAAGAGGCGCACCAGCAGGCCTTGGATGACCT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGGATGGCTTCATTCCTaGTCCGCACCTCGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIGWLHS*SAPRRP
Trigger: TGGACGCCGAGGTGCGGAGCAGGAATGAAGCCATCC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCCGCCGTGGCAAACGTaGCATAGAGGTGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIPPWQT*HRGVPG
Trigger: TCCTGGCACACCTCTATGCCACGTTTGCCACGGCGG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTGGATCAGTGAGAAGTaGGCCTCGGCCCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIWISEK*ASALPL
Trigger: CAAAGGCAGGGCCGAGGCTCACTTCTCACTGATCCA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCAGCTTGTGTCCGGGTaGTTAGTTTGGCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIQLVSG*LVWPGG
Trigger: ACCGCCTGGCCAAACTAATCACCCGGACACAAGCTG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCCTCCCGCTTCTTGTTaGGCTCTATCTGCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIPPASC*ALSAWR
Trigger: CCTCCACGCAGATAGAGCTCAACAAGAAGCGGGAGG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACTGGCCTCACTTAACTaGTCCTCCAGGGTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGLASLN*SSRVRQ
Trigger: CTGCCGAACCCTGGAGGATCAGTTAAGTGAGGCCAG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCCTCCAGCTGCCTCTTaGGCTCTTCTGTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIPPAAS*ALLFAG
Trigger: CCCAGCAAACAGAAGAGCTCAAGAGGCAGCTGGAGG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATCATGGCAGCGTCCGTaGTGGCCTTCTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGSWQRP*WPSWPS
Trigger: AGAAGGCCAAGAAGGCCATCACGGACGCTGCCATGA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGGTACGTCAGCTCCTTaGCCCTCCGCTCATACTTCC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIGTSAP*PSAHTS
Trigger: GGAAGTATGAGCGGAGGGTCAAGGAGCTGACGTACC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACCCGGGCATAGTCGCTaGGCTGTTTCTCTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGPGHSR*AVSLSS
Trigger: CGAAGACAGAGAAACAGCGCAGCGACTATGCCCGGG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAGGACTCCTTCAGGGATaGCTCCAGCTCTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGGLLQG*LQLCLA
Trigger: AGCCAAGCAGAGCTGGAGGCATCCCTGAAGGAGTCC...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACTCAAGAGCAGCCTCTaGTTCCTCGAGAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGLKSSL*FLESQL
Trigger: CAGCTGGCTCTCGAGGAAGCAGAGGCTGCTCTTGAG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGCGTCCAGGGCGCTCTaGATGGTTTCCACTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIASRAL*MVSTVL
Trigger: GAGAACAGTGGAAACCATGCAGAGCGCCCTGGACGC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATGGGTATGCAGCAGCTaGACCCTCTCGTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGWVCSS*TLSLES
Trigger: GGACTCCAACGAGAGGGTGCAGCTGCTGCATACCCA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGCGCCAGGGCGTTCTTaGCCTTGTTCTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIAPGRS*PCSLPP
Trigger: TGGAGGAAGAGAACAAGGCCAAGAACGCCCTGGCGC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGCTGCACCCTCTCGTTaGAGTCCAGGAGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIAAPSR*SPGAPV
Trigger: AACAGGAGCTCCTGGACTCCAACGAGAGGGTGCAGC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAACTCATGGTGTCAGCTaGGAGTCCCACCTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGTHGVS*ESHLQD
Trigger: ATCCTGCAGGTGGGACTCTCAGCTGACACCATGAGT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCTTCTCCAGCCAACCTaGGACACTGTAGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGILLQPT*DTVVHG
Trigger: ACCGTGGACTACAGTGTCTCAGGTTGGCTGGAGAAG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGGAATTCCACACGCATaGGGAACCCTCTGCACACAG +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIGIPHA*GTLCTQ
Trigger: CTGTGTGCAGAGGGTTCCTCATGCGTGTGGAATTCC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTCTCTGTCACCTCCTTaGTCTTGGCCTCGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGISLSPP*SWPRAG
Trigger: TCCAGCTCGAGGCCAAGATCAAGGAGGTGACAGAGA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCACTCTGGAGCTGCATaGGGTCTGTCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIHSGAA*GLSPAS
Trigger: AGAAGCTGGAGACAGACCTCATGCAGCTCCAGAGTG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGCTGAGAGTCCCACCTaGAGGATGAGAGCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIAESPT*RMRAED
Trigger: GTCTTCTGCTCTCATCCTGCAGGTGGGACTCTCAGC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCCTCTGCATCATCTATaGTGGCCACCAGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIPLHHL*WPPGSP
Trigger: GGGAGATCCTGGTGGCCAGCATAGATGATGCAGAGG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCGTGGCATAGAGGTGTaGCAGGAGCCTGTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIRGIEV*QEPVGR
Trigger: TCTTCCAACAGGCTCCTGGCACACCTCTATGCCACG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATTGTTGAGCTCTATCTaGGTGGAGGTGACGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGLLSSI*VEVTPP
Trigger: GGGAGGCGTCACCTCCACGCAGATAGAGCTCAACAA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGGATGCCTCCAGCTCTaGTTGGCTCTCCTCACACTT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIGCLQL*LALLTL
Trigger: AAGTGTGAGGAGAGCCAAGCAGAGCTGGAGGCATCC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTCATCCAGGTGGAGCTaGGTATCCTTCAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGISSRWS*VSFSCP
Trigger: GGGACAGCTGAAGGATACGCAGCTCCACCTGGATGA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAACCTCACTCTGGAGCTaGATGAGGTCTGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGTSLWS*MRSVSS
Trigger: GCTGGAGACAGACCTCATGCAGCTCCAGAGTGAGGT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACTCCTCAGCGTTCCTTaGATCCCTGCTGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGLLSVP*IPAGIF
Trigger: GAAGATGCCAGCAGGGATGCAAGGAACGCTGAGGAG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCACTCTTCACTCTCGTaGACCACCATCCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIHSSLS*TTILLE
Trigger: CTCCAGCAGGATGGTGGTCCACGAGAGTGAAGAGTG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACTGCTCCAGAAGGGCTaGCTCACTCTTCACTCTCGT +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGLLQKG*LTLHSR
Trigger: ACGAGAGTGAAGAGTGAGCCAGCCCTTCTGGAGCAG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAGGCGTACACATCCTCTaGTTTGACCACCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGGVHIL*FDHQGP
Trigger: AGGACCCTGGTGGTCAAACCAGAGGATGTGTACGCC...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCTGCATCATCTATGCTaGCCACCAGGATCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGILHHLC*PPGSPP
Trigger: AGGGGGAGATCCTGGTGGCCAGCATAGATGATGCAG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGTGCCAGGAGCCTGTTaGAAGACTTCTGGTACAGCC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIVPGAC*KTSGTA
Trigger: GGCTGTACCAGAAGTCTTCCAACAGGCTCCTGGCAC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATGTCAGCATCCGCCGTaGCAAACGTGGCATAGAGGT +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGCQHPP*QTWHRG
Trigger: ACCTCTATGCCACGTTTGCCACGGCGGATGCTGACA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCCGTTACACCGCAGCTaGTGCAGAACAAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIPLHRS*CRTRLC
Trigger: ACACAGCCTTGTTCTGCACCAGCTGCGGTGTAACGG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAAACGAGACTTCTGTGTaGTCAGCTCGCTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGNETSV*SARSGS
Trigger: GGAGCCTGAGCGAGCTGACCACACAGAAGTCTCGTT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAGCCTCCAGCTCTGCTTaGCTCTCCTCACACTTTGTC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGASSSA*LSSHFV
Trigger: GACAAAGTGTGAGGAGAGCCAAGCAGAGCTGGAGGC...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACCAGGGCGCTCTGCATaGTTTCCACTGTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGPGRSA*FPLFSG
Trigger: ACCAGAGAACAGTGGAAACCATGCAGAGCGCCCTGG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCATGAGGCTGGTGTTCTaGGTATGCAGCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIMRLVF*VCSSCT
Trigger: GGTGCAGCTGCTGCATACCCAGAACACCAGCCTCAT...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACCCCGGATTCTCCGGTaGTCAGAATGGACTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGPRILR*SEWTGF
Trigger: AAAACCAGTCCATTCTGATCACCGGAGAATCCGGGG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACCTCAGTTTCCACAGTaGCCTTCCCATCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGPQFPQ*PSHPEN
Trigger: GTTCTCAGGATGGGAAGGTCACTGTGGAAACTGAGG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACCAGCAAGCCAGCCTTaGAGAACACCTTGGTATGTC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGPASQP*RTPWYV
Trigger: GACATACCAAGGTGTTCTTCAAGGCTGGCTTGCTGG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATCGCTCAGGCTCCTCTaGATTTCCTCATTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGSLRLL*ISSFLP
Trigger: GGGCAAGAATGAGGAAATTCAGAGGAGCCTGAGCGA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATCTTTTTCTTCCAGCTaGCGACTCAGCTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGSFSSS*RLSSPA
Trigger: GGCTGGTGAGCTGAGTCGTCAGCTGGAAGAAAAAGA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAGCATATCTTCTGTCCTaGTCCAGAAGGGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGAYLLS*SRRAGS
Trigger: TGAGCCAGCCCTTCTGGAGCAGGACAGAAGATATGC...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTTACACCGCAGCTGGTaGAGAACAAGGCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGILHRSW*RTRLCS
Trigger: GGAACACAGCCTTGTTCTGCACCAGCTGCGGTGTAA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTTGTCCCTCAGGGATTaGACTGGCATTCAGCACTCG +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGILSLRD*TGIQHS
Trigger: CGAGTGCTGAATGCCAGTGCAATCCCTGAGGGACAA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATCGACACACTCTCCATaGTGCTGGAGAGGTCATCGA +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGSTHSP*CWRGHR
Trigger: TCGATGACCTCTCCAGCAGCATGGAGAGTGTGTCGA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATCACCAGCCTCGGTCTaGAAACGAGACTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGSPASV*KRDFCV
Trigger: CACACAGAAGTCTCGTTTGCAGACCGAGGCTGGTGA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACGTTCCTTGCATCCCTaGTGGCATCTTCTACCTCAC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGRSLHP*WHLLPH
Trigger: GTGAGGTAGAAGATGCCAGCAGGGATGCAAGGAACG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCCTCAGGGATTGCACTaGCATTCAGCACTCGGTATC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIPQGLH*HSALGI
Trigger: GATACCGAGTGCTGAATGCCAGTGCAATCCCTGAGG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCACTGGATGCAGAAGATaGACTCCCTCCTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGITGCRR*TPSSAP
Trigger: TGGTGCAGAGGAGGGAGTCCATCTTCTGCATCCAGT...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCACTCTCCATGCTGCTaGAGAGGTCATCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIHSPCC*RGHRSP
Trigger: TGGAGATCGATGACCTCTCCAGCAGCATGGAGAGTG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTCCTCGAGAGCCAGCTaGATATCAGCCTTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGISSRAS*ISAFSS
Trigger: GCTGGAAAAGGCTGATATCCAGCTGGCTCTCGAGGA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCCAGCTCTCGGATCCTaGTCTCCAGTTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIPALGS*SPVSGS
Trigger: AGATCCAGAAACTGGAGACCAGGATCCGAGAGCTGG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACTGTCCTCTTCACTCTaGTACGTCAGCTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGLSSSL*YVSSLT
Trigger: GGTCAAGGAGCTGACGTACCAGAGTGAAGAGGACAG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGTGACCTTCCCATCCTaGGAACTCTTGATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIVTFPS*ELLIFP
Trigger: GGGGAAAATCAAGAGTTCTCAGGATGGGAAGGTCAC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATGGACTCCCTCCTCTaGACCATCTTCTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGMDSLL*TIFWNS
Trigger: GGAATTCCAGAAGATGGTGCAGAGGAGGGAGTCCAT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATGGAGGCCCAGTGTCTaGTCATCTTCCACTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGWRPSV*SSSTLL
Trigger: AAGCAAAGTGGAAGATGAGCAGACACTGGGCCTCCA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCACACACTCTCCATGCTaGTGGAGAGGTCATCGATCT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGITHSPC*WRGHRS
Trigger: AGATCGATGACCTCTCCAGCAGCATGGAGAGTGTGT...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTGCTGGGTAAAGGCTTaGTTGCTCCTGGAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGICWVKA*LLLESW
Trigger: CCAACTTTCCAGGAGCAAGCAAGCCTTTACCCAGCA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTCTCCTTGCAGCCTCTaGTTGGTCTTCTCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGISPCSL*LVFSSE
Trigger: TTCACTGGAGAAGACCAAGCAGAGGCTGCAAGGAGA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACAGTGTCACTACTCATaGTGTCAGCTGAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGQCHYS*CQLRVP
Trigger: TGGGACTCTCAGCTGACACCATGAGTAGTGACACTG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCTCTGCACCATCTTCTaGAATTCCACACGCATGAGG +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGILCTIF*NSTRMR
Trigger: CCTCATGCGTGTGGAATTCCAGAAGATGGTGCAGAG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCCTCATTCTTGCCCCTaGCCTCACTTAACTGATCCT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIPHSCP*PHLTDP
Trigger: AGGATCAGTTAAGTGAGGCCAGGGGCAAGAATGAGG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCGGCGGCCAAGGAATTaGCTCTTTCAACATCAACCA +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIRRPRN*LFQHQP
Trigger: TGGTTGATGTTGAAAGAGCCAATTCCTTGGCCGCCG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTCTTCTACCTCACTCTaGAGCTGCATGAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGISSTSL*SCMRSV
Trigger: GACAGACCTCATGCAGCTCCAGAGTGAGGTAGAAGA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATCCTTGCATCCCTGCTaGCATCTTCTACCTCACTCT +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGSLHPC*HLLPHS
Trigger: AGAGTGAGGTAGAAGATGCCAGCAGGGATGCAAGGA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCAAAATGGATTCGGATaGACTTGCCAAAACGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIQNGFG*TCQNGR
Trigger: CCTCCCGTTTTGGCAAGTTCATCCGAATCCATTTTG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGTTGACTTGAGATTCTaGGATATCCGCACGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIVDLRF*DIRTFL
Trigger: GAGGAACGTGCGGATATCGCAGAATCTCAAGTCAAC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGGAAAGGAGCAGCTATaGCGAACACTTCCATTTCAG +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIGKEQL*RTLPFQ
Trigger: CTGAAATGGAAGTGTTCGGCATAGCTGCTCCTTTCC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCAGCTTCGTATCCAGTTaGTGGTTAATGCGAGTGACC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGISFVSS*WLMRVT
Trigger: GGTCACTCGCATTAACCAGCAACTGGATACGAAGCT...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATCCAGGTCTTCCACTTaGTGTTCCAGTTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGSRSST*CSSLLL
Trigger: CAAGAGCAAACTGGAACAGCAAGTGGAAGACCTGGA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCGAAGCAATACGTCTTaGCATCAAAGGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIRSNTS*HQRAGS
Trigger: AGAACCAGCCCTTTGATGCCAAGACGTATTGCTTCG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGTGTTCCATAGCCCCTaGAGTTTTGGTTTCATTGGG +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIVFHSP*SFGFIG
Trigger: CCCAATGAAACCAAAACTCCAGGGGCTATGGAACAC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTTGGCCTCGAGCTaGAATTTGGCTTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGILASS*NLALIS
Trigger: GCTGATCAAAGCCAAATTCCAGCTCGAGGCCAAGAT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCCTTTCGGAATTTGGTaGGATGAGCATTGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIPFGIW*DEHWLV
Trigger: AACAAGCCAATGCTCATCTCACCAAATTCCGAAAGG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCGGAATTTGGTGAGATaGGCATTGGCTTGTTCATCA +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIRNLVR*ALACSS
Trigger: TGATGAACAAGCCAATGCTCATCTCACCAAATTCCG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGGCATATTCTTCCTTTaGGTCCACCACGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIGIFFL*VHHEAI
Trigger: TATTGCTTCGTGGTGGACTCAAAGGAAGAATATGCC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTGTTCAGGTTTTCCCTaGAAAGGGCAGAGACAGTTT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGICSGFP*KGQRQF
Trigger: AAACTGTCTCTGCCCTTTTCAGGGAAAACCTGAACA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAGCTGGAATTTGGCTTTaGTCAGCTGATCGCATCTTT +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGAGIWL*SADRIF
Trigger: AAAGATGCGATCAGCTGATCAAAGCCAAATTCCAGC...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACTTGGTCTTCTCCAGTaGAGCACATTTAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGLGLLQ*STFSIH
Trigger: GTGAATGCTAAATGTGCTTCACTGGAGAAGACCAAG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAAGGCATTTTTCAGTTTaGAGAGCTCAGTGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGRHFSV*RAQCSR
Trigger: CCTTGAGCACTGAGCTCTTCAAACTGAAAAATGCCT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAACATTTAGCATTCACTaGCTCAACCTGTTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGTFSIH*LNLFLG
Trigger: TCCGAGGAACAGGTTGAGGCAGTGAATGCTAAATGT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAGTGATCAGAATGGACTaGTTTTCACGATCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGVIRMD*FSRSVS
Trigger: GCTGACTGATCGTGAAAACCAGTCCATTCTGATCAC...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATTCGTATCCAGTTGCTaGTTAATGCGAGTGACCATC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGFVSSC*LMRVTI
Trigger: GATGGTCACTCGCATTAACCAGCAACTGGATACGAA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATGTGTCAATTCAAGCTaGATTCGGAGGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGCVNSS*IRRILA
Trigger: AGCCAAGATCCTCCGAATCCAGCTTGAATTGACACA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAGCCTCTTGTAGGACTTaGCTTTCACTTGCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGASCRT*LSLAVY
Trigger: ATAAACTGCAAGTGAAAGTCAAGTCCTACAAGAGGC...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCATCCTGAGAACTCTTaGTTTTCCCCTTGGCATATT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIHPENS*FSPWHI
Trigger: AATATGCCAAGGGGAAAATCAAGAGTTCTCAGGATG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATGTCCAAAACACCAATaGAGTGTTGTCTTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGCPKHQ*SVVLEA
Trigger: AGCTTCCAAGACAACACTTCATTGGTGTTTTGGACA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTCTAATATGGACTCTTaGGCAAGCTTCAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGISNMDS*ASFKSP
Trigger: AGGAGACTTGAAGCTTGCTCAAGAGTCCATATTAGA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACAAAATCTTTCTTCTTaGGCCTTTCGTCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGQNLSS*AFRPAV
Trigger: AACAGCTGGACGAAAGGCTCAAGAAGAAAGATTTTG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR TCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGAGCCTGCAACTCTTTaGTTTTCTTCTGAAACTGGA +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIEPATL*FSSETG
Trigger: TCCAGTTTCAGAAGAAAATCAAAGAGTTGCAGGCTC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATTATCCACCAGATCCTaGAATCTCAGCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGLSTRS*NLSTFF
Trigger: GAAGAATGTGCTGAGATTGCAGGATCTGGTGGATAA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCATAAGTTTCAATATCTaGAGAGGCCAGCTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIISFNI*RGQLPS
Trigger: ACTGGGAAGCTGGCCTCTGCAGATATTGAAACTTAT...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCTTTGTCTTCCACTCTaGCAACACCTTGTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGILCLPL*QHLVKV
Trigger: AACTTTGACAAGGTGTTGGCAGAGTGGAAGACAAAG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTCTGTGTTCTTCTTCTaGTCTCCCTCAAGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGISVFFF*SPSSSN
Trigger: GTTTGAACTTGAGGGAGAGCAGAAGAAGAACACAGA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCAGGTCATTCTTCTCTTaGACCAGAGTCACCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIRSFFS*TRVTSF
Trigger: AAAACTGGTGACTCTGGTCCAAGAGAAGAATGACCT...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACTTGCTGTTCCAGTTTaGTCTTGGTTTTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGLAVPV*SWFCSK
Trigger: CTTTGAACAAAACCAAGAGCAAACTGGAACAGCAAG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAAATGAAGTGTTGTCTTaGAAGCTTCGTATCCAGTTG +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGNEVLS*KLRIQL
Trigger: CAACTGGATACGAAGCTTCCAAGACAACACTTCATT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGGGCCTTCTTCTCTCTaGTTAACTTTGCAATTGTTT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIGPSSL*LTLQLF
Trigger: AAACAATTGCAAAGTTAACCAGAGAGAAGAAGGCCC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTCTCCAGATCTAATATaGACTCTTGAGCAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGISPDLI*TLEQAS
Trigger: TGAAGCTTGCTCAAGAGTCCATATTAGATCTGGAGA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATCTCCAGTTCATGGATaGTTTTGCCATTTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGSPVHG*FCHFQQ
Trigger: TTGCTGAAAATGGCAAAACCATCCATGAACTGGAGA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAAGATCTGCTATCTCCTaGTCTAAGTTCTTATTTTCC +
Preference number: 4 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGRSAIS*SKFLFS
Trigger: GGAAAATAAGAACTTAGAGCAGGAGATAGCAGATCT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTTGCTCCTGGAAAGTTaGGATACTATGCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGILLLES*DTMLSF
Trigger: AAAAGAAAGCATAGTATCCCAACTTTCCAGGAGCAA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGATTTCTCCAGTTCATaGATGGTTTTGCCATTTTCA +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIDFSSS*MVLPFS
Trigger: TGAAAATGGCAAAACCATCCATGAACTGGAGAAATC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR GCA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCAAAGTTGGGATACTATaGTTTCTTTTTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIKVGIL*FLFLPA
Trigger: AGCTGGAAGAAAAAGAAAGCATAGTATCCCAACTTT...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS GCA 90 bp ACGCGCCTCTCTCAGAACTCACCACGGGAAACAGCACGGTCTGCCTaGCGCAGTCAGCACCTATCTCACTTACAGCCTCCTCCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: TRLSQNSPRETARSA*RSQHLSHLQPPPPA
Trigger: GGCAGGCGGAGGAGGCTGTAAGTGAGATAGGTGCTGACTGCGGCAGGCAGACCGTGCTGTTTCCCGTGGTGAGTTCTGAGAGAGGCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577963.1
CDS GCA 90 bp CAGCACGCGCCTCTCTCAGAACTCACCACGGGAAACAGCACGGTCTaGCTGCCGCAGTCAGCACCTATCTCACTTACAGCCTCCTCCGCC +
Preference number: 5 (lower is better)
Translates to: QHAPLSELTTGNSTV*LPQSAPISLTASSA
Trigger: GGCGGAGGAGGCTGTAAGTGAGATAGGTGCTGACTGCGGCAGGCAGACCGTGCTGTTTCCCGTGGTGAGTTCTGAGAGAGGCGCGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577963.1
CDS CCA 90 bp GACGACTCAGCTCACCAGCCTCGGTCTGCAAACGAGACTTCTGTGTaGTCAGCTCGCTCAGGCTCCTCTGAATTTCCTCATTCTTGCCCC +
Preference number: 5 (lower is better)
Translates to: DDSAHQPRSANETSV*SARSGSSEFPHSCP
Trigger: GGGGCAAGAATGAGGAAATTCAGAGGAGCCTGAGCGAGCTGACCACACAGAAGTCTCGTTTGCAGACCGAGGCTGGTGAGCTGAGTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS GCA 90 bp TCTGTGTGGTCAGCTCGCTCAGGCTCCTCTGAATTTCCTCATTCTTaGCCCTGGCCTCACTTAACTGATCCTCCAGGGTTCGGCAGATTT +
Preference number: 5 (lower is better)
Translates to: SVWSARSGSSEFPHS*PWPHLTDPPGFGRF
Trigger: AAATCTGCCGAACCCTGGAGGATCAGTTAAGTGAGGCCAGGGGCAAGAATGAGGAAATTCAGAGGAGCCTGAGCGAGCTGACCACACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS CCA 90 bp CTTCCTGTCCTCTTCACTCTAAGAATGAGAAAGTGGGAATGTCACTaGAGAGGAGGGGGCAGATTTGCACACGGCATGGGCAGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: LPVLFTLRMRKWECH*RGGGRFAHGMGSFL
Trigger: CAGAAAGCTGCCCATGCCGTGTGCAAATCTGCCCCCTCCTCTCCAGTGACATTCCCACTTTCTCATTCTTAGAGTGAAGAGGACAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579928.2
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTCCGCCGCCTGGCGGTaGGCGTGGCTCAGCTGGATC +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGISAAWR*AWLSWI
Trigger: GATCCAGCTGAGCCACGCCAACCGCCAGGCGGCGGA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS TCA 90 bp ACCAGGGTCCTGTTGTCCTCAGTTTCCACAGTGACCTTCCCATCCTaGGAACTCTTGATTTTCCCCTTGGCATATTCTTCCTTTGAGTCC +
Preference number: 5 (lower is better)
Translates to: TRVLLSSVSTVTFPS*ELLIFPLAYSSFES
Trigger: GGACTCAAAGGAAGAATATGCCAAGGGGAAAATCAAGAGTTCTCAGGATGGGAAGGTCACTGTGGAAACTGAGGACAACAGGACCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582580.1
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAGTCCGGGTGATTAGTTaGGCCAGGCGGTCATCCCGC +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGVRVIS*ARRSSR
Trigger: GCGGGATGACCGCCTGGCCAAACTAATCACCCGGAC...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCACACTCCTGAGGTGTTaGAGGGTCTCCGCCGCCTGG +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGITLLRC*RVSAAW
Trigger: CCAGGCGGCGGAGACCCTCAAACACCTCAGGAGTGT...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTGCGCCAGGGCGTTCTaGGCCTTGTTCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGICARAF*ALFSSS
Trigger: GGAGGAAGAGAACAAGGCCAAGAACGCCCTGGCGCA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAAGCTGCACCCTCTCGTaGGAGTCCAGGAGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGSCTLS*ESRSSC
Trigger: ACAGGAGCTCCTGGACTCCAACGAGAGGGTGCAGCT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCTCTCTGTCACCTCCTaGATCTTGGCCTCGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGILSVTS*ILASSW
Trigger: CCAGCTCGAGGCCAAGATCAAGGAGGTGACAGAGAG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAAGGGCGTTCTTGGCCTaGTTCTCTTCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGRAFLA*FSSSSC
Trigger: GCAGCTGGAGGAAGAGAACAAGGCCAAGAACGCCCT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAGAGATGAGCATTGGCTaGTTCATCAGCCTCCTCCGC +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGEMSIG*FISLLR
Trigger: GCGGAGGAGGCTGATGAACAAGCCAATGCTCATCTC...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATTGGAGTCCTTCTTCTaGGCCAGGTCCCCAGTAGCT +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGLESFF*ARSPVA
Trigger: AGCTACTGGGGACCTGGCCAAGAAGAAGGACTCCAA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAACCACCAGGGTCCTGTaGTCCTCAGTTTCCACAGTG +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGTTRVL*SSVSTV
Trigger: CACTGTGGAAACTGAGGACAACAGGACCCTGGTGGT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAGCGGCGGCCAAGGAATaGGCTCTTTCAACATCAACC +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGAAAKE*ALSTST
Trigger: GGTTGATGTTGAAAGAGCCAATTCCTTGGCCGCCGC...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATGCCTCCAGCTCTGCTaGGCTCTCCTCACACTTTGT +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGCLQLC*ALLTLC
Trigger: ACAAAGTGTGAGGAGAGCCAAGCAGAGCTGGAGGCA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATCTCCTCAGCGTTCCTaGCATCCCTGCTGGCATCTT +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGSPQRS*HPCWHL
Trigger: AAGATGCCAGCAGGGATGCAAGGAACGCTGAGGAGA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTGGTACGTCAGCTCCTaGACCCTCCGCTCATACTTC +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIWYVSS*TLRSYF
Trigger: GAAGTATGAGCGGAGGGTCAAGGAGCTGACGTACCA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAGCGGAGCTTGTTGACTaGAGATTCTGCGATATCCGC +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGAELVD*RFCDIR
Trigger: GCGGATATCGCAGAATCTCAAGTCAACAAGCTCCGC...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTACACATCCTCTGGTTaGACCACCAGGGTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIYTSSG*TTRVLL
Trigger: CAACAGGACCCTGGTGGTCAAACCAGAGGATGTGTA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACCCAGCAAGCCAGCCTaGAAGAACACCTTGGTATGT +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGPSKPA*KNTLVC
Trigger: ACATACCAAGGTGTTCTTCAAGGCTGGCTTGCTGGG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGTCACCTCCTTGATCTaGGCCTCGAGCTGGAATTTG +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIVTSLI*ASSWNL
Trigger: CAAATTCCAGCTCGAGGCCAAGATCAAGGAGGTGAC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAAGAGTCCCCTTCATTTaGGAGTCCTTCTTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGRVPFI*ESFFLA
Trigger: GGCCAAGAAGAAGGACTCCAAAATGAAGGGGACTCT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAACGAAGCAATACGTCTaGGCATCAAAGGGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGTKQYV*ASKGWF
Trigger: GAACCAGCCCTTTGATGCCAAGACGTATTGCTTCGT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATGGATTCGGATGAACTaGCCAAAACGGGAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGWIRMN*PKREEL
Trigger: CAACTCCTCCCGTTTTGGCAAGTTCATCCGAATCCA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTTTGTCTTCTTCAGCTaGGAGGTCATCCAAGGCCTG +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIFVFFS*EVIQGL
Trigger: CAGGCCTTGGATGACCTCCAAGCTGAAGAAGACAAA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTGGGTAAAGGCTTGCTaGCTCCTGGAAAGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIWVKAC*LLESWD
Trigger: ATCCCAACTTTCCAGGAGCAAGCAAGCCTTTACCCA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTTGCTGGGTAAAGGCTaGCTTGCTCCTGGAAAGTTG +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGILLGKG*LAPGKL
Trigger: CAACTTTCCAGGAGCAAGCAAGCCTTTACCCAGCAA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACTGTTCCTCGGAATCTaGAAGGCGCTGAGCAAGTTT +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGLFLGI*KALSKF
Trigger: AAACTTGCTCAGCGCCTTCAAGATTCCGAGGAACAG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGACACTCTGCCAACACCTaGTCAAAGTTCCTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGHSANT*SKFLCF
Trigger: GAAGCAGAGGAACTTTGACAAGGTGTTGGCAGAGTG...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAAAGCTTCGTATCCAGTaGCTGGTTAATGCGAGTGAC +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGKLRIQ*LVNASD
Trigger: GTCACTCGCATTAACCAGCAACTGGATACGAAGCTT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCAGGTCATTCTTCTCTaGGACCAGAGTCACCAGTTT +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIQVILL*DQSHQF
Trigger: AAACTGGTGACTCTGGTCCAAGAGAAGAATGACCTG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATTTTCGCTTTCAGCTaGTACTTGGAGCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGIFAFS*YLELQV
Trigger: GACCTGCAGCTCCAAGTACAAGCTGAAAGCGAAAAT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTTCCAGGTCTTCCACTaGCTGTTCCAGTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIFQVFH*LFQFAL
Trigger: AAGAGCAAACTGGAACAGCAAGTGGAAGACCTGGAA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATGGATTCGGAGGATCTaGGCTTCTTCATGCTCAAGA +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGWIRRI*ASSCSR
Trigger: TCTTGAGCATGAAGAAGCCAAGATCCTCCGAATCCA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGGACTTGACTTTCACTaGCAGTTTATCCACCAGATC +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIGLDFH*QFIHQI
Trigger: GATCTGGTGGATAAACTGCAAGTGAAAGTCAAGTCC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATGGCATATTCTTCCTTaGAGTCCACCACGAAGCAAT +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGWHILP*SPPRSN
Trigger: ATTGCTTCGTGGTGGACTCAAAGGAAGAATATGCCA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCAACCTGATCCACAGTTaGACCTTTGGTAACGTACTC +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGINLIHS*TFGNVL
Trigger: GAGTACGTTACCAAAGGTCAAACTGTGGATCAGGTT...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCAACACCAATGAAGTGTaGTCTTGGAAGCTTCGTATC +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGINTNEV*SWKLRI
Trigger: GATACGAAGCTTCCAAGACAACACTTCATTGGTGTT...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCCAGCACTCGGTATCTTaGTTTAAAATCGCCATAGAG +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIQHSVS*FKIAIE
Trigger: CTCTATGGCGATTTTAAACAAAGATACCGAGTGCTG...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGCCTTGAAGAACACCTaGGTATGTCCAAATTTGTAC +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIALKNT*VCPNLY
Trigger: GTACAAATTTGGACATACCAAGGTGTTCTTCAAGGC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGTAAGGTTTTTAACCTaGTTCTCTGTGGCATGCTTC +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIVRFLT*FSVACF
Trigger: GAAGCATGCCACAGAGAACAAGGTTAAAAACCTTAC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATCAAAATCTTTCTTCTaGAGCCTTTCGTCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGSKSFF*SLSSSC
Trigger: ACAGCTGGACGAAAGGCTCAAGAAGAAAGATTTTGA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCGCTCAATCTGCTTTCTaGATTTCTCCAGTTCATGGA +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGIAQSAF*ISPVHG
Trigger: TCCATGAACTGGAGAAATCAAGAAAGCAGATTGAGC...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGATTCAAAGAATTGACTTaGTCTTCTTCAGCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGFKELT*SSSAWR
Trigger: CCTCCAAGCTGAAGAAGACAAAGTCAATTCTTTGAA...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAACTTGCTGTTCCAGTTaGCTCTTGGTTTTGTTCAAA +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGTCCSS*LLVLFK
Trigger: TTTGAACAAAACCAAGAGCAAACTGGAACAGCAAGT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAAAATTTGACATCAGCTaGTTCAGGTTTTCCCTGAAA +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGKFDIS*FRFSLK
Trigger: TTTCAGGGAAAACCTGAACAAGCTGATGTCAAATTT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp TTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAATCTGTTCCAGTTTGCTCTaGGTTTTGTTCAAAGAATTG +
Preference number: 5 (lower is better)
Translates to: LLHVKKSHMDIKYQWSGICSSLL*VLFKEL
Trigger: CAATTCTTTGAACAAAACCAAGAGCAAACTGGAACA...GATTCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS-3UTR CAA 90 bp AGTTTATTGCATGTGAAAAAGAGTCACATGGACATTAAGTATCAATGGTCAGGAAGTTCATGGATGGTTTaGCCATTTTCAGCAATTTGT +
Preference number: 5 (lower is better)
Translates to: SLLHVKKSHMDIKYQWSGSSWMV*PFSAIC
Trigger: ACAAATTGCTGAAAATGGCAAAACCATCCATGAACT...TCCTGACCATTGATACTTAATGTCCATGTGACTCTTTTTCACATGCAATAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS GCA 72 bp GTCAGCATCCGCCGTGGCAAACGTGGCATAGAGGTGTaGCAGGAGCCTGTTGGAAGACTTCTGGTACAGCCC +
Preference number: 6 (lower is better)
Translates to: VSIRRGKRGIEV*QEPVGRLLVQP
Trigger: GGGCTGTACCAGAAGTCTTCCAACAGGCTCCTGGCACACCTCTATGCCACGTTTGCCACGGCGGATGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS GCA 72 bp CCTCTCTCAGAACTCACCACGGGAAACAGCACGGTCTaGCTGCCGCAGTCAGCACCTATCTCACTTACAGCC +
Preference number: 6 (lower is better)
Translates to: PLSELTTGNSTV*LPQSAPISLTA
Trigger: GGCTGTAAGTGAGATAGGTGCTGACTGCGGCAGGCAGACCGTGCTGTTTCCCGTGGTGAGTTCTGAGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577963.1
CDS GCA 72 bp TCTCAGAACTCACCACGGGAAACAGCACGGTCTGCCTaGCGCAGTCAGCACCTATCTCACTTACAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: SQNSPRETARSA*RSQHLSHLQPP
Trigger: AGGAGGCTGTAAGTGAGATAGGTGCTGACTGCGGCAGGCAGACCGTGCTGTTTCCCGTGGTGAGTTCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577963.1
CDS CCA 72 bp TCTTCTTTCCACTGTCAGCATCCGCCGTGGCAAACGTaGCATAGAGGTGTGCCAGGAGCCTGTTGGAAGACT +
Preference number: 6 (lower is better)
Translates to: SSFHCQHPPWQT*HRGVPGACWKT
Trigger: AGTCTTCCAACAGGCTCCTGGCACACCTCTATGCCACGTTTGCCACGGCGGATGCTGACAGTGGAAAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS CCA 72 bp CGCTCAGGCTCCTCTGAATTTCCTCATTCTTGCCCCTaGCCTCACTTAACTGATCCTCCAGGGTTCGGCAGA +
Preference number: 6 (lower is better)
Translates to: RSGSSEFPHSCP*PHLTDPPGFGR
Trigger: TCTGCCGAACCCTGGAGGATCAGTTAAGTGAGGCCAGGGGCAAGAATGAGGAAATTCAGAGGAGCCTGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS CCA 72 bp GCTCACCAGCCTCGGTCTGCAAACGAGACTTCTGTGTaGTCAGCTCGCTCAGGCTCCTCTGAATTTCCTCAT +
Preference number: 6 (lower is better)
Translates to: AHQPRSANETSV*SARSGSSEFPH
Trigger: ATGAGGAAATTCAGAGGAGCCTGAGCGAGCTGACCACACAGAAGTCTCGTTTGCAGACCGAGGCTGGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS CCA 72 bp ACATTTTGCATATCTTCTGTCCTGCTCCAGAAGGGCTaGCTCACTCTTCACTCTCGTGGACCACCATCCTGC +
Preference number: 6 (lower is better)
Translates to: TFCISSVLLQKG*LTLHSRGPPSC
Trigger: GCAGGATGGTGGTCCACGAGAGTGAAGAGTGAGCCAGCCCTTCTGGAGCAGGACAGAAGATATGCAAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577963.1
ENST00000579928.2
ENST00000583535.6
CDS CAA 72 bp TTCTTCCTGTCCTCTTCACTCTGGTACGTCAGCTCCTaGACCCTCCGCTCATACTTCCTCAGGCCCTTAACA +
Preference number: 6 (lower is better)
Translates to: FFLSSSLWYVSS*TLRSYFLRPLT
Trigger: TGTTAAGGGCCTGAGGAAGTATGAGCGGAGGGTCAAGGAGCTGACGTACCAGAGTGAAGAGGACAGGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS TCA 72 bp CTAATGCCCCAGGGAAACCACGTCGAAAGCCCTCGCTaGCATAGATCATCCAAGATGTGTAACGGTCCTTCA +
Preference number: 6 (lower is better)
Translates to: LMPQGNHVESPR*HRSSKMCNGPS
Trigger: TGAAGGACCGTTACACATCTTGGATGATCTATGTCAGCGAGGGCTTTCGACGTGGTTTCCCTGGGGCATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582580.1
CDS TCA 72 bp CTGTTGTCCTCAGTTTCCACAGTGACCTTCCCATCCTaGGAACTCTTGATTTTCCCCTTGGCATATTCTTCC +
Preference number: 6 (lower is better)
Translates to: LLSSVSTVTFPS*ELLIFPLAYSS
Trigger: GGAAGAATATGCCAAGGGGAAAATCAAGAGTTCTCAGGATGGGAAGGTCACTGTGGAAACTGAGGACAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582580.1
ENST00000583535.6
CDS CAA 72 bp TCCAGTTTGCTCTTGGTTTTGTTCAAAGAATTGACTTaGTCTTCTTCAGCTTGGAGGTCATCCAAGGCCTGC +
Preference number: 6 (lower is better)
Translates to: SSLLLVLFKELT*SSSAWRSSKAC
Trigger: GCAGGCCTTGGATGACCTCCAAGCTGAAGAAGACAAAGTCAATTCTTTGAACAAAACCAAGAGCAAACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583535.6
CDS CAA 90 bp CTTCTGAAACTGGAGGCCCAGTGTCTGCTCATCTTCCACTTTGCTTaGAAGTTGACAATATTCAAAATCTTTCTTCTTGAGCCTTTCGTC +
Preference number: 6 (lower is better)
Translates to: LLKLEAQCLLIFHFA*KLTIFKIFLLEPFV
Trigger: GACGAAAGGCTCAAGAAGAAAGATTTTGAATATTGTCAACTTCAAAGCAAAGTGGAAGATGAGCAGACACTGGGCCTCCAGTTTCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583535.6