RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYH10 (Homo sapiens)

Ensembl gene IDs: ENSG00000133026

Ensembl transcript IDs: ENST00000269243.8, ENST00000360416.8, ENST00000379980.8, ENST00000411957.1, ENST00000465458.1, ENST00000469865.1, ENST00000472728.1, ENST00000476737.1, ENST00000488329.1

Found 912 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCCACCAGCTCGGCTTAGGGGTCCACGGCTGCTTGCTCCTGACGTaGGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGG +
Preference number: 1 (lower is better)
Translates to: FHQLGLGVHGCLLLT*GGRRQSQAVRETIW
Trigger: CCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCACGTCAGGAGCAAGCAGCCGTGGACCCCTAAGCCGAGCTGGTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR GCA 90 bp CCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTaGCACCTGGGGCCTCAGCTGCAGTGTGGCCACTATCCCTTCTAT +
Preference number: 1 (lower is better)
Translates to: PGGSGDHLEVYMIHG*HLGPQLQCGHYPFY
Trigger: ATAGAAGGGATAGTGGCCACACTGCAGCTGAGGCCCCAGGTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR GCA 90 bp AATCCCGTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTaGATTCCTAACTGTCCCACTGTATTGCCTCCTCTGGCTTCCTGC +
Preference number: 1 (lower is better)
Translates to: NPVACQFPKSAGGPG*IPNCPTVLPPLASC
Trigger: GCAGGAAGCCAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTACGGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR CCA 90 bp AGACAAGTGCAGTTTAGAGTCCACAGTGGTCTAGGAGACTTGATGTaGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTAGGTTACCT +
Preference number: 1 (lower is better)
Translates to: RQVQFRVHSGLGDLM*LRSRGPREHRTRLP
Trigger: AGGTAACCTAGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACCACTGTGGACTCTAAACTGCACTTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR TCA 90 bp AAGCAGGATACAGTATGCATAGGCTGGAGAGCCTTAAGACACAGTTaGTCTTTCAGGAAGGAATCCCGTAGCTTGCCAATTTCCGAAATC +
Preference number: 1 (lower is better)
Translates to: KQDTVCIGWRALRHS*SFRKESRSLPISEI
Trigger: GATTTCGGAAATTGGCAAGCTACGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCATACTGTATCCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR TCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACTGCAGAGCGACTGAGTaGCGACCACGGCGCTGCCCC +
Preference number: 2 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYCRATE*RPRRCP
Trigger: GGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCA...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR TCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGAGCATGCAGAGCGACTaGGTGACGACCACGGCGCTG +
Preference number: 2 (lower is better)
Translates to: KVSMRARLAMGRGLPPARSMQSD*VTTTAL
Trigger: CAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCT...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGGCAGGAGGCCCCGGGTaGATTCCTAACTGTCCCACT +
Preference number: 2 (lower is better)
Translates to: KVSMRARLAMGRGLPPARAGGPG*IPNCPT
Trigger: AGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGC...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGACCTGGGGCCTCAGCTaGAGTGTGGCCACTATCCCT +
Preference number: 2 (lower is better)
Translates to: KVSMRARLAMGRGLPPARTWGLS*SVATIP
Trigger: AGGGATAGTGGCCACACTGCAGCTGAGGCCCCAGGT...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR CCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGCTAGGAGACTTGATGTaGCTGAGGAGTCGGGGGCCA +
Preference number: 2 (lower is better)
Translates to: KVSMRARLAMGRGLPPARLGDLM*LRSRGP
Trigger: TGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAG...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR TCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTGCTTGCTCCTGACGTaGGGAGGGCGCCGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDCLLLT*GGRRQS
Trigger: GCTCTGCCGGCGCCCTCCTCACGTCAGGAGCAAGCA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGCCACTATCCCTTCTATaGACAGACCAGCCCTCGCCA +
Preference number: 2 (lower is better)
Translates to: KVSMRARLAMGRGLPPARPLSLL*TDQPSP
Trigger: TGGCGAGGGCTGGTCTGTGCATAGAAGGGATAGTGG...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACACCCCAAATGGGTGTTaGTTCCGATCCAGCCCACCC +
Preference number: 2 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYTPNGC*FRSSPP
Trigger: GGGTGGGCTGGATCGGAAGCAACACCCATTTGGGGT...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGGTTCACATGAGTAGATaGGGGACACCATCGACTCGA +
Preference number: 2 (lower is better)
Translates to: KVSMRARLAMGRGLPPARVHMSR*GTPSTR
Trigger: TCGAGTCGATGGTGTCCCGCATCTACTCATGTGAAC...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR TCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTGCAGAGCGACTGAGTaGCGACCACGGCGCTGCCCC +
Preference number: 2 (lower is better)
Translates to: GVTPTGMSTFRKMASVLECRATE*RPRRCP
Trigger: GGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCCAATTTCCGAAATCTaGAGGAGGCCCCGGGTGCAT +
Preference number: 2 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDPISEI*RRPRVH
Trigger: ATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR TCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACGCCTTAAGACACAGTTaGTCTTTCAGGAAGGAATCC +
Preference number: 2 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYALRHS*SFRKES
Trigger: GGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGC...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACCCACTATCCCTTCTATaGACAGACCAGCCCTCGCCA +
Preference number: 2 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHPLSLL*TDQPSP
Trigger: TGGCGAGGGCTGGTCTGTGCATAGAAGGGATAGTGG...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR CCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACGGGCCCGGCTGGCGATaGGGAGGGGCCTTCCACCAG +
Preference number: 2 (lower is better)
Translates to: VNIQEDGICSGGSINLIDGPGWR*GGAFHQ
Trigger: CTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCC...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR TCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTTTGCAAGGTCAGCATaGGGGCCCGGCTGGCGATGG +
Preference number: 2 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEFARSA*GPGWRW
Trigger: CCATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR TCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTGGTTACCTGTCTGTATaGCAGAGAGCATGCAGAGCG +
Preference number: 2 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTGYLSV*QRACRA
Trigger: CGCTCTGCATGCTCTCTGTCATACAGACAGGTAACC...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCAAGCAGGATACAGTATaGATAGGCTGGAGAGCCTTA +
Preference number: 2 (lower is better)
Translates to: DREHAERLSDDHGAAPITKQDTV*IGWRAL
Trigger: TAAGGCTCTCCAGCCTATGCATACTGTATCCTGCTT...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACAAGCAGGATACAGTATaGATAGGCTGGAGAGCCTTA +
Preference number: 2 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHKQDTV*IGWRAL
Trigger: TAAGGCTCTCCAGCCTATGCATACTGTATCCTGCTT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGCCACTATCCCTTCTATaGACAGACCAGCCCTCGCCA +
Preference number: 2 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEPLSLL*TDQPSP
Trigger: TGGCGAGGGCTGGTCTGTGCATAGAAGGGATAGTGG...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR TCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGGTTACCTGTCTGTATaGCAGAGAGCATGCAGAGCG +
Preference number: 2 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEGYLSV*QRACRA
Trigger: CGCTCTGCATGCTCTCTGTCATACAGACAGGTAACC...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGACCCCAAATGGGTGTTaGTTCCGATCCAGCCCACCC +
Preference number: 2 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGTPNGC*FRSSPP
Trigger: GGGTGGGCTGGATCGGAAGCAACACCCATTTGGGGT...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGTTCACATGAGTAGATaGGGGACACCATCGACTCGA +
Preference number: 2 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEVHMSR*GTPSTR
Trigger: TCGAGTCGATGGTGTCCCGCATCTACTCATGTGAAC...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGCCAATTTCCGAAATCTaGAGGAGGCCCCGGGTGCAT +
Preference number: 2 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGPISEI*RRPRVH
Trigger: ATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGG...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR CAA 90 bp GACAAACTTGGAACAAGCCTCGGACACAAAACCAATATTCCCATTTaGGGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGC +
Preference number: 2 (lower is better)
Translates to: DKLGTSLGHKTNIPI*GSKQRLNLQGQHEG
Trigger: GCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCCCAAAATGGGAATATTGGTTTTGTGTCCGAGGCTTGTTCCAAGTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR TCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGCAAGGCCAGTTCACATaGGTAGATGCGGGACACCAT +
Preference number: 2 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGQGQFT*VDAGHH
Trigger: ATGGTGTCCCGCATCTACTCATGTGAACTGGCCTTG...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR TCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACCAAGGCCAGTTCACATaGGTAGATGCGGGACACCAT +
Preference number: 2 (lower is better)
Translates to: VNIQEDGICSGGSINLIDQGQFT*VDAGHH
Trigger: ATGGTGTCCCGCATCTACTCATGTGAACTGGCCTTG...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR TCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACGCTCAAAGCAGCGGCTaGATTTGCAAGGTCAGCATG +
Preference number: 2 (lower is better)
Translates to: VNIQEDGICSGGSINLIDAQSSG*ICKVSM
Trigger: CATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGC...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR TCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTGCCTTAAGACACAGTTaGTCTTTCAGGAAGGAATCC +
Preference number: 2 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCALRHS*SFRKES
Trigger: GGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGC...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR CCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGCATGGTAACCCCAAATaGGTGTTGCTTCCGATCCAG +
Preference number: 2 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGHGNPK*VLLPIQ
Trigger: CTGGATCGGAAGCAACACCCATTTGGGGTTACCATG...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACAGGAATCCCGTAGCTTaGCAATTTCCGAAATCTGCA +
Preference number: 2 (lower is better)
Translates to: VNIQEDGICSGGSINLIDRNPVA*QFPKSA
Trigger: TGCAGATTTCGGAAATTGGCAAGCTACGGGATTCCT...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGAGGAATCCCGTAGCTTaGCAATTTCCGAAATCTGCA +
Preference number: 2 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGRNPVA*QFPKSA
Trigger: TGCAGATTTCGGAAATTGGCAAGCTACGGGATTCCT...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR GCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGAATGAGAGAGACAAGTaGAGTTTAGAGTCCACAGTG +
Preference number: 2 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGNERDK*SLESTV
Trigger: CACTGTGGACTCTAAACTGCACTTGTCTCTCTCATT...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR TCA 72 bp CTCGGCTTAGGGGTCCACGGCTGCTTGCTCCTGACGTaGGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAG +
Preference number: 3 (lower is better)
Translates to: LGLGVHGCLLLT*GGRRQSQAVRE
Trigger: CTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCACGTCAGGAGCAAGCAGCCGTGGACCCCTAAGCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR CAA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGAACCCCAAATGGGTGTaGCTTCCGATCCAGCCCACC +
Preference number: 3 (lower is better)
Translates to: KVSMRARLAMGRGLPPARNPKWV*LPIQPT
Trigger: GGTGGGCTGGATCGGAAGCAACACCCATTTGGGGTT...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR CAA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAACTGTCCCACTGTATaGCCTCCTCTGGCTTCCTGC +
Preference number: 3 (lower is better)
Translates to: ERLSDDHGAAPITQRPATNCPTV*PPLASC
Trigger: GCAGGAAGCCAGAGGAGGCAATACAGTGGGACAGTT...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR CAA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGAAGGAATCCCGTAGCTaGCCAATTTCCGAAATCTGC +
Preference number: 3 (lower is better)
Translates to: KVSMRARLAMGRGLPPARKESRS*PISEIC
Trigger: GCAGATTTCGGAAATTGGCAAGCTACGGGATTCCTT...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR TCA 72 bp TATGCACAGACCAGCCCTCGCCAAGGCCAGTTCACATaGGTAGATGCGGGACACCATCGACTCGAGGGGCAG +
Preference number: 3 (lower is better)
Translates to: YAQTSPRQGQFT*VDAGHHRLEGQ
Trigger: CTGCCCCTCGAGTCGATGGTGTCCCGCATCTACTCATGTGAACTGGCCTTGGCGAGGGCTGGTCTGTGCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCAACTGTCCCACTGTATaGCCTCCTCTGGCTTCCTGC +
Preference number: 3 (lower is better)
Translates to: DREHAERLSDDHGAAPITNCPTV*PPLASC
Trigger: GCAGGAAGCCAGAGGAGGCAATACAGTGGGACAGTT...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR CAA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACAGCCCCTTTCACAGTTaGCTCACTGAAATAGCATTG +
Preference number: 3 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYSPFHS*LTEIAL
Trigger: CAATGCTATTTCAGTGAGCAAACTGTGAAAGGGGCT...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAGGAATCCCGTAGCTaGCCAATTTCCGAAATCTGC +
Preference number: 3 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFKESRS*PISEIC
Trigger: GCAGATTTCGGAAATTGGCAAGCTACGGGATTCCTT...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR GCA 72 bp GCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTaGATTCCTAACTGTCCCACTGTATTGCCTCCTCTG +
Preference number: 3 (lower is better)
Translates to: ACQFPKSAGGPG*IPNCPTVLPPL
Trigger: CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR GCA 72 bp GACACAGTTGATCTTTCAGGAAGGAATCCCGTAGCTTaGCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGC +
Preference number: 3 (lower is better)
Translates to: DTVDLSGRNPVA*QFPKSAGGPGC
Trigger: GCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTACGGGATTCCTTCCTGAAAGATCAACTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR CCA 72 bp CAGTTTAGAGTCCACAGTGGTCTAGGAGACTTGATGTaGCTGAGGAGTCGGGGGCCACGTGAACACAGAACT +
Preference number: 3 (lower is better)
Translates to: QFRVHSGLGDLM*LRSRGPREHRT
Trigger: AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACCACTGTGGACTCTAAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR CAA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTAGCCTTAAGACACAGTaGATCTTTCAGGAAGGAATC +
Preference number: 3 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTSLKTQ*IFQEGI
Trigger: GATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCT...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR CAA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACAACTGTCCCACTGTATaGCCTCCTCTGGCTTCCTGC +
Preference number: 3 (lower is better)
Translates to: VNIQEDGICSGGSINLIDNCPTV*PPLASC
Trigger: GCAGGAAGCCAGAGGAGGCAATACAGTGGGACAGTT...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR CAA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACAGTGGTCTAGGAGACTaGATGTGGCTGAGGAGTCGG +
Preference number: 3 (lower is better)
Translates to: VNIQEDGICSGGSINLIDSGLGD*MWLRSR
Trigger: CCGACTCCTCAGCCACATCAAGTCTCCTAGACCACT...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR CAA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGACCAATATTCCCATTTaGGGCTCAAAGCAGCGGCTG +
Preference number: 3 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGTNIPI*GSKQRL
Trigger: CAGCCGCTGCTTTGAGCCCAAAATGGGAATATTGGT...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR TCA 72 bp ACAGTATGCATAGGCTGGAGAGCCTTAAGACACAGTTaGTCTTTCAGGAAGGAATCCCGTAGCTTGCCAATT +
Preference number: 3 (lower is better)
Translates to: TVCIGWRALRHS*SFRKESRSLPI
Trigger: AATTGGCAAGCTACGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCATACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR CAA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATAGTGGTCTAGGAGACTaGATGTGGCTGAGGAGTCGG +
Preference number: 3 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDSGLGD*MWLRSR
Trigger: CCGACTCCTCAGCCACATCAAGTCTCCTAGACCACT...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR-3UTR CAA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATACCTCATTGACAAACTaGGAACAAGCCTCGGACACA +
Preference number: 3 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDTSLTN*EQASDT
Trigger: TGTGTCCGAGGCTTGTTCCAAGTTTGTCAATGAGGT...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGCTCTTCAGCCGAAGATaGTGGCGCGGGCGCACGTCC +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARLFSRR*WRGRTS
Trigger: GGACGTGCGCCCGCGCCACCATCTTCGGCTGAAGAG...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGTTTGCAAGGTCAGCATaGGGGCCCGGCTGGCGATGG +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARFARSA*GPGWRW
Trigger: CCATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAA...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGTCCCAAACCCACCGCTaGCTCCGCCGGGCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARSQTHR*LRRAPL
Trigger: TAAAGGAGCCCGGCGGAGGCAGCGGTGGGTTTGGGA...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269243.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGTCTGCGATCTGGTCCTaGAGGTCGGTCGTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARSAIWS*RSVVSP
Trigger: CGGGGAGACGACCGACCTGCAGGACCAGATCGCAGA...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGAGCTCATCTCTCTCCTaGTCGGCGTGTCGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARSSSLS*SACRRA
Trigger: AGCCCGCCGACACGCCGAGCAGGAGAGAGATGAGCT...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACTCTTCTGGGCGGCGCTaGGCTCGGCTGCTAGCTCGG +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYSSGRR*ARLLAR
Trigger: CCGAGCTAGCAGCCGAGCGCAGCGCCGCCCAGAAGA...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGCAGAGGCGCTGTTGGTaGTCTCGTCCGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARQRRCW*SRPPAH
Trigger: ATGAGCTGGCGGACGAGATCACCAACAGCGCCTCTG...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGCCTGCAACTTTACTCTaGCTGGGGTGGCTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARPATLL*LGWLRL
Trigger: GAGACGCAGCCACCCCAGTCAGAGTAAAGTTGCAGG...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCACGGCTGCTTGCTCCTaGCGTGAGGAGGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITTAACS*REEGAG
Trigger: GCCGGCGCCCTCCTCACGTCAGGAGCAAGCAGCCGT...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGCGGTTAGGGAAGCCCTaGCGACAGATTCGGATCCCT +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARRLGKP*RQIRIP
Trigger: AGGGATCCGAATCTGTCGCCAGGGCTTCCCTAACCG...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACGGGCCCGGCTGGCGATaGGGAGGGGCCTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHGPGWR*GGAFHQ
Trigger: CTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCC...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACGCGGCTTCACCTTTGTaGAGACTCGCCACCACTGCC +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYAASPL*RLATTA
Trigger: GGCAGTGGTGGCGAGTCTTCACAAAGGTGAAGCCGC...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCGAGGGCCCGGGCCAGTaGCAGGGCTTTGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATEGPGQ*QGFGFF
Trigger: AAAGAAACCAAAGCCCTGTCACTGGCCCGGGCCCTC...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACTCCAGCTGCAGCTTTTaGCGAGCCCCTTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYSSCSF*RAPSSS
Trigger: CGAGGAGGAAGGGGCTCGGCAAAAGCTGCAGCTGGA...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGGACTCAGCCTTGACCTaGTGCAGGACCTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARDSALT*CRTFTS
Trigger: TGAGGTGAAGGTCCTGCAGCAGGTCAAGGCTGAGTC...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGTTTGTCATACGCCAGTaGCTTCTCCTCCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARFVIRQ*LLLQAL
Trigger: CAGCGCCTGGAGGAGAAGGCACTGGCGTATGACAAA...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCCTCCTCCTCCAGCTGTaGGATCCGAGCTTCCAGACG +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATLLLQL*DPSFQT
Trigger: CGTCTGGAAGCTCGGATCGCACAGCTGGAGGAGGAG...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTCTTCTGGGCGGCGCTaGGCTCGGCTGCTAGCTCGG +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITSSGRR*ARLLAR
Trigger: CCGAGCTAGCAGCCGAGCGCAGCGCCGCCCAGAAGA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCGCAGGAGGCCCCGGGTaGATTCCTAACTGTCCCACT +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATAGGPG*IPNCPT
Trigger: AGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGC...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACGTACGTAGTTCCTGCTaGGCTGCCGTGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYVRSSC*AAVVSS
Trigger: GCTGGACACCACGGCAGCCCAGCAGGAACTACGTAC...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGCGACCTGGCGCTGGTaGTCCAGGTCCACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDATWRW*SRSTVR
Trigger: CCTCACGGTGGACCTGGACCACCAGCGCCAGGTCGC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGTCTCAAACTCCTCCTTaGCCTCCAGGGCTTCCTCGA +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARSQTPP*PPGLPR
Trigger: TCGAGGAAGCCCTGGAGGCCAAGGAGGAGTTTGAGA...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGAGTCTACATGATCCATaGCTGCCACCTGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARSLHDP*LPPGAS
Trigger: TGAGGCCCCAGGTGGCAGCCATGGATCATGTAGACT...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTGGTTCTTCAGGGTGCTaGCCTCGCGGCTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFGSSGC*PRGSGP
Trigger: AGGGCCTGAGCCGCGAGGTCAGCACCCTGAAGAACC...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGGTTCTTCAGGGTGCTaGCCTCGCGGCTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDGSSGC*PRGSGP
Trigger: AGGGCCTGAGCCGCGAGGTCAGCACCCTGAAGAACC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGGCTCAAAGCAGCGGCTaGATTTGCAAGGTCAGCATG +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARAQSSG*ICKVSM
Trigger: CATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGC...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGCTGTCTGATGACTGGTaGAAAAGGGTGGCCACGTTG +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARLSDDW*KRVATL
Trigger: CAACGTGGCCACCCTTTTGCACCAGTCATCAGACAG...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGTTGAGCTCATCAATCTaGGCCTGCAGCTCTGCGATC +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARLSSSI*ACSSAI
Trigger: GATCGCAGAGCTGCAGGCGCAGATTGATGAGCTCAA...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGCTCCTCCAGGGCTGTTaGGTGTCTTTGTCTCATGTC +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARLLQGC*VSLSHV
Trigger: GACATGAGACAAAGACACGCAACAGCCCTGGAGGAG...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTCAGCCAACTGGGACTaGAGGGCCAGCACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATSANWD*RASTCF
Trigger: GAAGCAAGTGCTGGCCCTGCAGTCCCAGTTGGCTGA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGTGCTCATCCCTGGTTTaGAGGTCTCTCTCGAACTGC +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARCSSLV*RSLSNC
Trigger: GCAGTTCGAGAGAGACCTGCAAACCAGGGATGAGCA...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGTCTTCTGGGCGGCGCTaGGCTCGGCTGCTAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLSSGRR*ARLLAR
Trigger: CCGAGCTAGCAGCCGAGCGCAGCGCCGCCCAGAAGA...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGCCTCCTCTGGCTTCCTaGAACTTTACTCTGACTGGG +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARPPLAS*NFTLTG
Trigger: CCCAGTCAGAGTAAAGTTGCAGGAAGCCAGAGGAGG...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCTCTTCAGCCGAAGATaGTGGCGCGGGCGCACGTCC +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITLFSRR*WRGRTS
Trigger: GGACGTGCGCCCGCGCCACCATCTTCGGCTGAAGAG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCTCTTCAGCCGAAGATaGTGGCGCGGGCGCACGTCC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDLFSRR*WRGRTS
Trigger: GGACGTGCGCCCGCGCCACCATCTTCGGCTGAAGAG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTTCTCCTCCAGGCGCTaGCTCAGGGCCTCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHFSSRR*LRASAS
Trigger: GGACGCGGAGGCCCTGAGCCAGCGCCTGGAGGAGAA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACCCTCCAGACGAAGCTTaGCATCTTCCGTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYPPDEA*HLPWPG
Trigger: TCCAGGCCACGGAAGATGCCAAGCTTCGTCTGGAGG...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGGACGGACTAATTTGTTaGCGGCTGCTCGTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARDGLIC*RLLVPW
Trigger: CCAAGGAACGAGCAGCCGCCAACAAATTAGTCCGTC...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGGCTTCATCCGAGCGTTaGCCTTCTCCATCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARASSER*PSPSAL
Trigger: AAGAGCAGATGGAGAAGGCCAACGCTCGGATGAAGC...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCCTTCAAGGTGCAGCTaGCGCCGGCCAGATCGGCTG +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFPSRCS*RRPDRL
Trigger: CAGCCGATCTGGCCGGCGCCAGCTGCACCTTGAAGG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCGGGCCCGGCTGGCGATaGGGAGGGGCCTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCGPGWR*GGAFHQ
Trigger: CTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCC...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGCGGTCAGGTGTCTGGTaGTCAACAGCCAGTACAGTT +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARRSGVW*STASTV
Trigger: AACTGTACTGGCTGTTGACCACCAGACACCTGACCG...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAGCATGCAGAGCGACTaGGTGACGACCACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFSMQSD*VTTTAL
Trigger: CAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCT...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTCCCAAACCCACCGCTaGCTCCGCCGGGCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITSQTHR*LRRAPL
Trigger: TAAAGGAGCCCGGCGGAGGCAGCGGTGGGTTTGGGA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269243.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACAGGTCGATGCATGGCTaGAGATCCAGCCCGAAATCG +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYRSMHG*RSSPKS
Trigger: CGATTTCGGGCTGGATCTGCAGCCATGCATCGACCT...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGGGTGTTTCGGAGAGTTaGCATCAGCTTGGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARGVSES*HQLGER
Trigger: TCTCTCACCAAGCTGATGGCAACTCTCCGAAACACC...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCTGCGCCTGCAGCTCTaGGATCTGGTCCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDLRLQL*DLVLQV
Trigger: GACCTGCAGGACCAGATCGCAGAGCTGCAGGCGCAG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTCATCAATCTGCGCCTaGAGCTCTGCGATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATSSICA*SSAIWS
Trigger: GGACCAGATCGCAGAGCTGCAGGCGCAGATTGATGA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGATGTCTGCTCGGAGCTaGTTGTTCTGCCTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARMSARS*LFCLSN
Trigger: GTTTGAGAGGCAGAACAAGCAGCTCCGAGCAGACAT...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCCTCCAGTTGCTGGCGTaGATTGTCACTCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATLQLLA*IVTLLG
Trigger: GCCCAGAAGAGTGACAATGCACGCCAGCAACTGGAG...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTTCTGCCGCTCCAGTTaGTGGCGTGCATTGTCACTC +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATFCRSS*WRALSL
Trigger: GAGTGACAATGCACGCCAGCAACTGGAGCGGCAGAA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGGCTGCCTCAAAACCATaGCGTTCTGATGGAATCCAC +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARAASKP*RSDGIH
Trigger: GTGGATTCCATCAGAACGCCATGGTTTTGAGGCAGC...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGAATCTGTCTGATGACTaGTGCAAAAGGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARNLSDD*CKRVAT
Trigger: CGTGGCCACCCTTTTGCACCAGTCATCAGACAGATT...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACTTTCATCATCACCTCTaGCCAGTGCGCCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYFHHHL*PVRPAA
Trigger: AGCTGCAGGGCGCACTGGCCAGAGGTGATGATGAAA...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACTTGGTATCAGCCAACTaGGACTGCAGGGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYLVSAN*DCRAST
Trigger: AGTGCTGGCCCTGCAGTCCCAGTTGGCTGATACCAA...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTTCTCCTCCAGGCGCTaGCTCAGGGCCTCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTFSSRR*LRASAS
Trigger: GGACGCGGAGGCCCTGAGCCAGCGCCTGGAGGAGAA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACTTCGCAGCCTCGATTTaGGCTTCGAGGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYFAASI*ASRSFR
Trigger: CCTGAAGGACCTCGAAGCCCAAATCGAGGCTGCGAA...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGTCTGCTTCCTCCAGCTaGCGTTTAAGCTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARSASSS*RLSCFI
Trigger: GATGAAGCAGCTTAAACGCCAGCTGGAGGAAGCAGA...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGGCTCAGGCCCTCGTTaGCCTCGGTGGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDGSGPR*PRWHHP
Trigger: TGGATGATGCCACCGAGGCCAACGAGGGCCTGAGCC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACCCTTCAAGGTGCAGCTaGCGCCGGCCAGATCGGCTG +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHPSRCS*RRPDRL
Trigger: CAGCCGATCTGGCCGGCGCCAGCTGCACCTTGAAGG...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACTGGCAGGGTTGTAGATaGCAGCCCTGTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYWQGCR*QPCPQR
Trigger: TCTTTGTGGACAGGGCTGTCATCTACAACCCTGCCA...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACGTCATACCAGTGACTTaGTCCAGACCCACGATACGG +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYVIPVT*SRPTIR
Trigger: CCGTATCGTGGGTCTGGATCAAGTCACTGGTATGAC...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACCCGTTACAGCGAAGCTaGTCTAGGACTAGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYPLQRS*SRTRCG
Trigger: TCCACACCTAGTCCTAGATCAGCTTCGCTGTAACGG...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACTCCTCCTGCTGCTCCTaGAGACTGTTCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYSSCCS*RLFFSS
Trigger: AGAGGAGAAGAACAGTCTTCAGGAGCAGCAGGAGGA...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCAGAGGCGCTGTTGGTaGTCTCGTCCGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFQRRCW*SRPPAH
Trigger: ATGAGCTGGCGGACGAGATCACCAACAGCGCCTCTG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGAGGCGCTGTTGGTaGTCTCGTCCGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITQRRCW*SRPPAH
Trigger: ATGAGCTGGCGGACGAGATCACCAACAGCGCCTCTG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGTTTGCAAGGTCAGCATaGGGGCCCGGCTGGCGATGG +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLFARSA*GPGWRW
Trigger: CCATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAA...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACGCTCAAAGCAGCGGCTaGATTTGCAAGGTCAGCATG +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYAQSSG*ICKVSM
Trigger: CATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGC...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACTCTAAAAGCTGCTGGTaGTTCCGCTCCATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYSKSCW*FRSISS
Trigger: GGAGGAGATGGAGCGGAAGCACCAGCAGCTTTTAGA...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGCTGCGCCTGCAGCTCTaGGATCTGGTCCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLLRLQL*DLVLQV
Trigger: GACCTGCAGGACCAGATCGCAGAGCTGCAGGCGCAG...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTGGAGCTCCTGGACCTaGGCGTCGAGCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDWSSWT*ASSFFL
Trigger: GAGGAAGAAGCTCGACGCGCAGGTCCAGGAGCTCCA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTGCTCATCCCTGGTTTaGAGGTCTCTCTCGAACTGC +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATCSSLV*RSLSNC
Trigger: GCAGTTCGAGAGAGACCTGCAAACCAGGGATGAGCA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGAGCTCATCTCTCTCCTaGTCGGCGTGTCGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLSSSLS*SACRRA
Trigger: AGCCCGCCGACACGCCGAGCAGGAGAGAGATGAGCT...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCCCTCCTCTGGCTTCCTaGAACTTTACTCTGACTGGG +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATPPLAS*NFTLTG
Trigger: CCCAGTCAGAGTAAAGTTGCAGGAAGCCAGAGGAGG...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTTCAGCCGAAGATGGTaGCGCGGGCGCACGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTFSRRW*RGRTSP
Trigger: TGGGGACGTGCGCCCGCGCCACCATCTTCGGCTGAA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACGTTGCTGCTGCTTCTTaGCAAAGGCCTTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYVAAAS*QRPFWP
Trigger: TGGCCAGAAAGGCCTTTGCCAAGAAGCAGCAGCAAC...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTGCAGCTCTGCGATCTaGTCCTGCAGGTCGGTCGTC +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITCSSAI*SCRSVV
Trigger: GACGACCGACCTGCAGGACCAGATCGCAGAGCTGCA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTGTACGTAGTTCCTGCTaGGCTGCCGTGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFVRSSC*AAVVSS
Trigger: GCTGGACACCACGGCAGCCCAGCAGGAACTACGTAC...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCGAGGCGACCTGGCGCTaGTGGTCCAGGTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCEATWR*WSRSTV
Trigger: CACGGTGGACCTGGACCACCAGCGCCAGGTCGCCTC...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCCTCGTTGGCCTCGGTaGCATCATCCAGTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITPRWPR*HHPVPA
Trigger: AGCGGGAACTGGATGATGCCACCGAGGCCAACGAGG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGCTGTATTGCCTCCTCTaGCTTCCTGCAACTTTACTC +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARLYCLL*LPATLL
Trigger: GAGTAAAGTTGCAGGAAGCCAGAGGAGGCAATACAG...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCCGGTCAGGTGTCTGGTaGTCAACAGCCAGTACAGTT +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATRSGVW*STASTV
Trigger: AACTGTACTGGCTGTTGACCACCAGACACCTGACCG...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTCTCAGTCATACCAGTaGCTTGATCCAGACCCACGA +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATSQSYQ*LDPDPR
Trigger: TCGTGGGTCTGGATCAAGTCACTGGTATGACTGAGA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACGAGGGCCCGGGCCAGTaGCAGGGCTTTGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHEGPGQ*QGFGFF
Trigger: AAAGAAACCAAAGCCCTGTCACTGGCCCGGGCCCTC...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTGCTCCCGCACCTGTTTaGTCAGCAGCCGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFAPAPV*SAAASS
Trigger: AGAAGAAGCGGCTGCTGATCAAACAGGTGCGGGAGC...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCCTCCATCTTTTTCTTTaGAGCTACAGCAAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATLHLFL*SYSKRP
Trigger: CGGGCGCTTGCTGTAGCTTCAAAGAAAAAGATGGAG...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTGCGGAAGCGGTCGTTaGGCAGCTCCATGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITCGSGR*AAPCCS
Trigger: AGAGCAACATGGAGCTGCTCAACGACCGCTTCCGCA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCGGTTCTTCAGGGTGCTaGCCTCGCGGCTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCGSSGC*PRGSGP
Trigger: AGGGCCTGAGCCGCGAGGTCAGCACCCTGAAGAACC...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCGTGGCTGCGTCTCGTTaGCATCACTGGTCTTACTTT +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATVAASR*HHWSYF
Trigger: AAAGTAAGACCAGTGATGTCAACGAGACGCAGCCAC...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCCTGCAACTTTACTCTaGCTGGGGTGGCTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDPATLL*LGWLRL
Trigger: GAGACGCAGCCACCCCAGTCAGAGTAAAGTTGCAGG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGGCCTTAAGACACAGTTaGTCTTTCAGGAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARALRHS*SFRKES
Trigger: GGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGC...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTGCTTGCTCCTGACGTaGGGAGGGCGCCGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCCLLLT*GGRRQS
Trigger: GCTCTGCCGGCGCCCTCCTCACGTCAGGAGCAAGCA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTTTGCAAGGTCAGCATaGGGGCCCGGCTGGCGATGG +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTFARSA*GPGWRW
Trigger: CCATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGGATTCCAATGAAAGATaGTCCCTGACGTTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARDSNER*SLTFGP
Trigger: AGGACCAAACGTCAGGGAGCATCTTTCATTGGAATC...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGTCCAGCTGCAGCTTTTaGCGAGCCCCTTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLSSCSF*RAPSSS
Trigger: CGAGGAGGAAGGGGCTCGGCAAAAGCTGCAGCTGGA...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCATTCTGCAGCTTACTTaGTTTCTCCGCCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATILQLT*FLRQLH
Trigger: GTGGAGCTGGCGGAGAAAGCAAGTAAGCTGCAGAAT...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGAATACCCTTCTTCTCTaGTTCTTCCAGAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARNTLLL*FFQKGG
Trigger: TCCACCCTTCTGGAAGAAGCAGAGAAGAAGGGTATT...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTCAGCCAACTGGGACTaGAGGGCCAGCACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDSANWD*RASTCF
Trigger: GAAGCAAGTGCTGGCCCTGCAGTCCCAGTTGGCTGA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGTCTGCTCGGAGCTaGTTGTTCTGCCTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYMSARS*LFCLSN
Trigger: GTTTGAGAGGCAGAACAAGCAGCTCCGAGCAGACAT...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACGCACCCTCGAGTTCCTaGAGCTTGGCCTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHAPSSS*SLAFSS
Trigger: GGAGCTGAAGGCCAAGCTGCAGGAACTCGAGGGTGC...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGCTTCCTGCTCAAGCTaGTCCTCCAGCTGCCCAATC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDASCSS*SSSCPI
Trigger: GATTGGGCAGCTGGAGGAGCAGCTTGAGCAGGAAGC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGAGTTTACGCCGAGATaGGTTGGCACGCGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDEFTPR*VGTRRF
Trigger: GAAGCGACGCGTGCCAACGCATCTCGGCGTAAACTC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGAGGAATCCCGTAGCTTaGCAATTTCCGAAATCTGCA +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARRNPVA*QFPKSA
Trigger: TGCAGATTTCGGAAATTGGCAAGCTACGGGATTCCT...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGAAGCAGGATACAGTATaGATAGGCTGGAGAGCCTTA +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARKQDTV*IGWRAL
Trigger: TAAGGCTCTCCAGCCTATGCATACTGTATCCTGCTT...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATACCCCAAATGGGTGTTaGTTCCGATCCAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDTPNGC*FRSSPP
Trigger: GGGTGGGCTGGATCGGAAGCAACACCCATTTGGGGT...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCGTTCACATGAGTAGATaGGGGACACCATCGACTCGA +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATVHMSR*GTPSTR
Trigger: TCGAGTCGATGGTGTCCCGCATCTACTCATGTGAAC...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACGTTCACATGAGTAGATaGGGGACACCATCGACTCGA +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYVHMSR*GTPSTR
Trigger: TCGAGTCGATGGTGTCCCGCATCTACTCATGTGAAC...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACGCTGCCTCAAAACCATaGCGTTCTGATGGAATCCAC +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYAASKP*RSDGIH
Trigger: GTGGATTCCATCAGAACGCCATGGTTTTGAGGCAGC...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCGGTTAGGGAAGCCCTaGCGACAGATTCGGATCCCT +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDRLGKP*RQIRIP
Trigger: AGGGATCCGAATCTGTCGCCAGGGCTTCCCTAACCG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTGCAGCTCTGCGATCTaGTCCTGCAGGTCGGTCGTC +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHCSSAI*SCRSVV
Trigger: GACGACCGACCTGCAGGACCAGATCGCAGAGCTGCA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGTTGGCATGGAGCTCCTaGACCTGCGCGTCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLLAWSS*TCASSF
Trigger: GAAGCTCGACGCGCAGGTCCAGGAGCTCCATGCCAA...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTTGGCATGGAGCTCCTaGACCTGCGCGTCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHLAWSS*TCASSF
Trigger: GAAGCTCGACGCGCAGGTCCAGGAGCTCCATGCCAA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCGCCTTCAGAGACCTTaGCATGGAGCTCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFRLQRP*HGAPGP
Trigger: AGGTCCAGGAGCTCCATGCCAAGGTCTCTGAAGGCG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTGCGACCTGGCGCTGGTaGTCCAGGTCCACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCATWRW*SRSTVR
Trigger: CCTCACGGTGGACCTGGACCACCAGCGCCAGGTCGC...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTGAGGCGACCTGGCGCTaGTGGTCCAGGTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCEATWR*WSRSTV
Trigger: CACGGTGGACCTGGACCACCAGCGCCAGGTCGCCTC...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCCTCCAGACGAAGCTTaGCATCTTCCGTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFPPDEA*HLPWPG
Trigger: TCCAGGCCACGGAAGATGCCAAGCTTCGTCTGGAGG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACCATTCTGCTCATCCCTaGTTTGCAGGTCTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYHSAHP*FAGLSR
Trigger: TCGAGAGAGACCTGCAAACCAGGGATGAGCAGAATG...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCGGCTGCTCGTTCCTTaGCTTCCTGCTCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFRLLVP*LPAQAA
Trigger: AGCAGCTTGAGCAGGAAGCCAAGGAACGAGCAGCCG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCGGCTGCTCGTTCCTTaGCTTCCTGCTCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDRLLVP*LPAQAA
Trigger: AGCAGCTTGAGCAGGAAGCCAAGGAACGAGCAGCCG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCATCTGCTCTTTATACTaGTCCGCGTGTCGACGCTCA +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATICSLY*SACRRS
Trigger: TGAGCGTCGACACGCGGACCAGTATAAAGAGCAGAT...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACCCTCGTTGGCCTCGGTaGCATCATCCAGTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHPRWPR*HHPVPA
Trigger: AGCGGGAACTGGATGATGCCACCGAGGCCAACGAGG...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACCCAGCCCTCTTCTCGTaGTTTGGAATGATACAACGA +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYPALFS*FGMIQR
Trigger: TCGTTGTATCATTCCAAATCACGAGAAGAGGGCTGG...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTGCGGGCTCGCTCAGATaGGGCAAGTTCCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTAGSLR*GKFLLQ
Trigger: TTGCAGGAGGAACTTGCCTCATCTGAGCGAGCCCGC...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTGCGGAAGCGGTCGTTaGGCAGCTCCATGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHCGSGR*AAPCCS
Trigger: AGAGCAACATGGAGCTGCTCAACGACCGCTTCCGCA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCCGATCCAAAAGCAATTaGCTCTTCAGCCGAAGATGG +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATRSKSN*LFSRRW
Trigger: CCATCTTCGGCTGAAGAGGCAATTGCTTTTGGATCG...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTTTGCTTGCAAAAGCTaGCGTTCAAGTTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATFACKS*RSSSPG
Trigger: TCCTGGGGAACTTGAACGGCAGCTTTTGCAAGCAAA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269243.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGTTCCAGAATTGGATTTaGTTGCAAAAGCTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARFQNWI*LQKLPF
Trigger: GAACGGCAGCTTTTGCAAGCAAATCCAATTCTGGAA...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCGCCCATTATGTGCATTaGTTCCATGGTCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATAHYVH*FHGLLE
Trigger: TTCCAGGAGACCATGGAAGCAATGCACATAATGGGC...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTCTGCGATCTGGTCCTaGAGGTCGGTCGTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCSAIWS*RSVVSP
Trigger: CGGGGAGACGACCGACCTGCAGGACCAGATCGCAGA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCCTCAAGTCCCTTTTCTaGTTTTCGGCCTTGTTCCGT +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATLKSLF*FSALFR
Trigger: ACGGAACAAGGCCGAAAAGCAGAAAAGGGACTTGAG...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACCTCAAGTCCCTTTTCTaGTTTTCGGCCTTGTTCCGT +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYLKSLF*FSALFR
Trigger: ACGGAACAAGGCCGAAAAGCAGAAAAGGGACTTGAG...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTTTGTACGTAGTTCCTaGTGGGCTGCCGTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDFVRSS*WAAVVS
Trigger: GGACACCACGGCAGCCCAGCAGGAACTACGTACAAA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTCAGCCTTGACCTGCTaGAGGACCTTCACCTCACAC +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITSALTC*RTFTSH
Trigger: GTGTGAGGTGAAGGTCCTGCAGCAGGTCAAGGCTGA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGACTCAGCCTTGACCTaGTGCAGGACCTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDDSALT*CRTFTS
Trigger: TGAGGTGAAGGTCCTGCAGCAGGTCAAGGCTGAGTC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTTTGTCATACGCCAGTaGCTTCTCCTCCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDFVIRQ*LLLQAL
Trigger: CAGCGCCTGGAGGAGAAGGCACTGGCGTATGACAAA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTCTCCTCCTCCAGCTGTaGGATCCGAGCTTCCAGACG +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTLLLQL*DPSFQT
Trigger: CGTCTGGAAGCTCGGATCGCACAGCTGGAGGAGGAG...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTGCACCCTCGAGTTCCTaGAGCTTGGCCTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTAPSSS*SLAFSS
Trigger: GGAGCTGAAGGCCAAGCTGCAGGAACTCGAGGGTGC...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACGCTTCCTGCTCAAGCTaGTCCTCCAGCTGCCCAATC +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHASCSS*SSSCPI
Trigger: GATTGGGCAGCTGGAGGAGCAGCTTGAGCAGGAAGC...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGGCTTCCTGCTCAAGCTaGTCCTCCAGCTGCCCAATC +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLASCSS*SSSCPI
Trigger: GATTGGGCAGCTGGAGGAGCAGCTTGAGCAGGAAGC...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCAGCTGGCGTTTAAGCTaGTTCATCCGAGCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITSWRLS*FIRALA
Trigger: GGCCAACGCTCGGATGAAGCAGCTTAAACGCCAGCT...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGGAGTTTACGCCGAGATaGGTTGGCACGCGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLEFTPR*VGTRRF
Trigger: GAAGCGACGCGTGCCAACGCATCTCGGCGTAAACTC...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTCTGACTGGGGTGGCTaGGTCTCGTTGACATCACTG +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFSDWGG*VSLTSL
Trigger: CAGTGATGTCAACGAGACGCAGCCACCCCAGTCAGA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGACCCCAAATGGGTGTTaGTTCCGATCCAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLTPNGC*FRSSPP
Trigger: GGGTGGGCTGGATCGGAAGCAACACCCATTTGGGGT...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTACCTGGGGCCTCAGCTaGAGTGTGGCCACTATCCCT +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTTWGLS*SVATIP
Trigger: AGGGATAGTGGCCACACTGCAGCTGAGGCCCCAGGT...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTGCAGCTCTGCGATCTaGTCCTGCAGGTCGGTCGTC +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTCSSAI*SCRSVV
Trigger: GACGACCGACCTGCAGGACCAGATCGCAGAGCTGCA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTTTCATCATCACCTCTaGCCAGTGCGCCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDFHHHL*PVRPAA
Trigger: AGCTGCAGGGCGCACTGGCCAGAGGTGATGATGAAA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTACGCCGAGATGCGTTaGCACGCGTCGCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFYAEMR*HASLLL
Trigger: AAGAAGAAGCGACGCGTGCCAACGCATCTCGGCGTA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTCATCCAGTTCCCGCTaGAGTTTACGCCGAGATGCG +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFSSSSR*SLRRDA
Trigger: CGCATCTCGGCGTAAACTCCAGCGGGAACTGGATGA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTCATCCAGTTCCCGCTaGAGTTTACGCCGAGATGCG +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITSSSSR*SLRRDA
Trigger: CGCATCTCGGCGTAAACTCCAGCGGGAACTGGATGA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCGGCTCAGGCCCTCGTTaGCCTCGGTGGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCGSGPR*PRWHHP
Trigger: TGGATGATGCCACCGAGGCCAACGAGGGCCTGAGCC...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTGGCAGGGTTGTAGATaGCAGCCCTGTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFWQGCR*QPCPQR
Trigger: TCTTTGTGGACAGGGCTGTCATCTACAACCCTGCCA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTGTGGAGGCATCTCATaGCGCTTCTTCCCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITCGGIS*RFFPLY
Trigger: GTACAGAGGGAAGAAGCGTCATGAGATGCCTCCACA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTGTGGAGGCATCTCATaGCGCTTCTTCCCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDCGGIS*RFFPLY
Trigger: GTACAGAGGGAAGAAGCGTCATGAGATGCCTCCACA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCCGTTACAGCGAAGCTaGTCTAGGACTAGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFPLQRS*SRTRCG
Trigger: TCCACACCTAGTCCTAGATCAGCTTCGCTGTAACGG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACCCAGAACTCCAGCTCTaGAAAATATCTTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYPELQL*KISCSV
Trigger: GACAGAGCAAGATATTTTTCAGAGCTGGAGTTCTGG...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCGCGGCTTCACCTTTGTaGAGACTCGCCACCACTGCC +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCAASPL*RLATTA
Trigger: GGCAGTGGTGGCGAGTCTTCACAAAGGTGAAGCCGC...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTGCGGAAGCGGTCGTTaGGCAGCTCCATGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTCGSGR*AAPCCS
Trigger: AGAGCAACATGGAGCTGCTCAACGACCGCTTCCGCA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGTGCCAATGCTTCTACTaGAAAATCTGCCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARCQCFY*KICLFF
Trigger: AAAGAACAGGCAGATTTTGCAGTAGAAGCATTGGCA...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTGGCCAGGTAACCTCTaGAAACGGCCTGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFWPGNL*KRPGRR
Trigger: TCTTCTTCCAGGCCGTTTGCAGAGGTTACCTGGCCA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCGCGGCACAGTTCCGCTaGAAGACCTTTAAGGCACTT +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITAAQFR*KTFKAL
Trigger: AAGTGCCTTAAAGGTCTTGCAGCGGAACTGTGCCGC...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGCGGCACAGTTCCGCTaGAAGACCTTTAAGGCACTT +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDAAQFR*KTFKAL
Trigger: AAGTGCCTTAAAGGTCTTGCAGCGGAACTGTGCCGC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTCTAAAAGCTGCTGGTaGTTCCGCTCCATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDSKSCW*FRSISS
Trigger: GGAGGAGATGGAGCGGAAGCACCAGCAGCTTTTAGA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTTTAGCAGCAAGTCTTaGCCTCATCTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATFSSKS*PHLFCF
Trigger: GAAGCAGAAGAGATGAGGGCAAGACTTGCTGCTAAA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCTCCTCCAGGGCTGTTaGGTGTCTTTGTCTCATGTC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDLLQGC*VSLSHV
Trigger: GACATGAGACAAAGACACGCAACAGCCCTGGAGGAG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACAATACCCTTCTTCTCTaGTTCTTCCAGAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYNTLLL*FFQKGG
Trigger: TCCACCCTTCTGGAAGAAGCAGAGAAGAAGGGTATT...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACGCTGCCGGATCCGACTaGTCAGGTTTAGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHAAGSD*SGLVSG
Trigger: GCCAGAAACTAAACCTGAGCAGTCGGATCCGGCAGC...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTGAGGTCTTCCATGTCTaGTCGGAGCTGCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFEVFHV*SELLVL
Trigger: CAGAACAAGCAGCTCCGAGCAGACATGGAAGACCTC...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTGGAGCTTGCGGAGCTaGTTAATCACCTCATCCCGA +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITWSLRS*LITSSR
Trigger: TCGGGATGAGGTGATTAAGCAGCTCCGCAAGCTCCA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCCGCTCATCCTCAACCTaGATGAAGATTTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATRSSST*MKISFS
Trigger: GCTGAAAGAAATCTTCATGCAGGTTGAGGATGAGCG...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGCCAATTTCCGAAATCTaGAGGAGGCCCCGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLPISEI*RRPRVH
Trigger: ATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGG...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTTCAGCCGAAGATGGTaGCGCGGGCGCACGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEFSRRW*RGRTSP
Trigger: TGGGGACGTGCGCCCGCGCCACCATCTTCGGCTGAA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTCGGTTAGGGAAGCCCTaGCGACAGATTCGGATCCCT +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTRLGKP*RQIRIP
Trigger: AGGGATCCGAATCTGTCGCCAGGGCTTCCCTAACCG...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTCGCCTTCAGAGACCTTaGCATGGAGCTCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTRLQRP*HGAPGP
Trigger: AGGTCCAGGAGCTCCATGCCAAGGTCTCTGAAGGCG...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGTTGGTATCAGCCAACTaGGACTGCAGGGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLLVSAN*DCRAST
Trigger: AGTGCTGGCCCTGCAGTCCCAGTTGGCTGATACCAA...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTTTCTCCTCCAGGCGCTaGCTCAGGGCCTCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCFSSRR*LRASAS
Trigger: GGACGCGGAGGCCCTGAGCCAGCGCCTGGAGGAGAA...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTCCTCCAGACGAAGCTTaGCATCTTCCGTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTPPDEA*HLPWPG
Trigger: TCCAGGCCACGGAAGATGCCAAGCTTCGTCTGGAGG...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTGTCCACCTGTAGAGTaGTCTTGCGGAAGCGGTCGT +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHCPPVE*SCGSGR
Trigger: ACGACCGCTTCCGCAAGACCACTCTACAGGTGGACA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTGCATTGTCACTCTTCTaGGCGGCGCTGCGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCALSLF*AALRSA
Trigger: AGCCGAGCGCAGCGCCGCCCAGAAGAGTGACAATGC...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGACGGACTAATTTGTTaGCGGCTGCTCGTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDDGLIC*RLLVPW
Trigger: CCAAGGAACGAGCAGCCGCCAACAAATTAGTCCGTC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTGCTTCATCCGAGCGTTaGCCTTCTCCATCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFASSER*PSPSAL
Trigger: AAGAGCAGATGGAGAAGGCCAACGCTCGGATGAAGC...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGTACGCCGAGATGCGTTaGCACGCGTCGCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLYAEMR*HASLLL
Trigger: AAGAAGAAGCGACGCGTGCCAACGCATCTCGGCGTA...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCAACTTTACTCTGACTaGGGTGGCTGCGTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDQLYSD*GGCVSL
Trigger: CAACGAGACGCAGCCACCCCAGTCAGAGTAAAGTTG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAACTTTACTCTGACTaGGGTGGCTGCGTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITQLYSD*GGCVSL
Trigger: CAACGAGACGCAGCCACCCCAGTCAGAGTAAAGTTG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACGCCTCAGCTGCAGTGTaGCCACTATCCCTTCTATGC +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHASAAV*PLSLLC
Trigger: GCATAGAAGGGATAGTGGCCACACTGCAGCTGAGGC...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACAGTCTACATGATCCATaGCTGCCACCTGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHSLHDP*LPPGAS
Trigger: TGAGGCCCCAGGTGGCAGCCATGGATCATGTAGACT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCACGATACGGTCCACTaGTGGCTCATGAAGACCAGA +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITHDTVH*WLMKTR
Trigger: TCTGGTCTTCATGAGCCACCAGTGGACCGTATCGTG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360416.8
CDS-3UTR TCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGAGTCTCGGCCGACCTTaGTCCGGGGAGTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLESLGRP*SGESGW
Trigger: CCATCCTGACTCCCCGGATCAAGGTCGGCCGAGACT...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGCTTTATTGATGCGATaGACGAGCCAGCGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDALLMR*TSQRKS
Trigger: GCTCTTTCGCTGGCTCGTTCATCGCATCAATAAAGC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTCTTCATCTTTGGCCTaGAGTTCTTCCTCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFSSSLA*SSSSWR
Trigger: TCGCCAGGAGGAAGAACTTCAGGCCAAAGATGAAGA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCTCCATCTTTTTCTTTaGAGCTACAGCAAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITLHLFL*SYSKRP
Trigger: CGGGCGCTTGCTGTAGCTTCAAAGAAAAAGATGGAG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCCATCCTCAACCTGCATaGAGATTTCTTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATHPQPA*RFLSAS
Trigger: AGAAGCTGAAAGAAATCTTCATGCAGGTTGAGGATG...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGTGGCTGCGTCTCGTTaGCATCACTGGTCTTACTTT +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDVAASR*HHWSYF
Trigger: AAAGTAAGACCAGTGATGTCAACGAGACGCAGCCAC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTGCAGAGCGACTGAGTaGCGACCACGGCGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPCRATE*RPRRCP
Trigger: GGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACATCTGGAAGTCTACATaGTCCATGGCTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHIWKST*SMAATW
Trigger: CCAGGTGGCAGCCATGGATCATGTAGACTTCCAGAT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACACGGCTGCTTGCTCCTaGCGTGAGGAGGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDTAACS*REEGAG
Trigger: GCCGGCGCCCTCCTCACGTCAGGAGCAAGCAGCCGT...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACCACGATCTTGAAGCATaGATCTGTAAGCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYHDLEA*ICKQIQ
Trigger: CTGAATCTGCTTACAGATGCATGCTTCAAGATCGTG...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTCTCTATTAGGTCGATaGATGGCTGCAGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDSLLGR*MAADPA
Trigger: GGCTGGATCTGCAGCCATGCATCGACCTAATAGAGA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGCTGTCTGATGACTGGTaGAAAAGGGTGGCCACGTTG +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLLSDDW*KRVATL
Trigger: CAACGTGGCCACCCTTTTGCACCAGTCATCAGACAG...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGGCGGCACAGTTCCGCTaGAAGACCTTTAAGGCACTT +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLAAQFR*KTFKAL
Trigger: AAGTGCCTTAAAGGTCTTGCAGCGGAACTGTGCCGC...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACAAGACTCGCCACCACTaGCAGTGCCGTAATTTCAGG +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHKTRHH*QCRNFR
Trigger: CCTGAAATTACGGCACTGGCAGTGGTGGCGAGTCTT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCTTGATCTTGGCCTCTaGTGTCACCTTTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITLDLGL*CHLFQL
Trigger: CAGCTGGAAAAGGTGACAGCAGAGGCCAAGATCAAG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACAGCTTTCTTCAGCTCTaGCACTTCTTGTTCACGTTT +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYSFLQL*HFLFTF
Trigger: AAACGTGAACAAGAAGTGGCAGAGCTGAAGAAAGCT...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTTGGCCTGTTCCAGCTaGTCTGAGAGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCLACSS*SESSSR
Trigger: CCTGGAGGAGCTCTCAGAGCAGCTGGAACAGGCCAA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTTCTCCTCTTCCAGCTaGCGGATCCGACTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCFSSSS*RIRLLR
Trigger: CCTGAGCAGTCGGATCCGGCAGCTGGAAGAGGAGAA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTTCTGCCGCTCCAGTTaGTGGCGTGCATTGTCACTC +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTFCRSS*WRALSL
Trigger: GAGTGACAATGCACGCCAGCAACTGGAGCGGCAGAA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTGCAGGAGGCCCCGGGTaGATTCCTAACTGTCCCACT +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCAGGPG*IPNCPT
Trigger: AGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGC...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACCGCAACTGTATTTTCTaGCATGGAAGCTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYRNCIF*HGSLIS
Trigger: ACTGATCAAGCTTCCATGCCAGAAAATACAGTTGCG...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACACTGGTGCAAAAGGGTaGCCACGTTGTCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHTGAKG*PRCHSG
Trigger: CCCTGAATGACAACGTGGCCACCCTTTTGCACCAGT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACGAAACATGCCCTTCTTaGTTTTATATGCGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYETCPS*FYMRSQ
Trigger: TTGGCTCCGCATATAAAACCAAGAAGGGCATGTTTC...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGCCTCTTCTCGTGATTTaGAATGATACAACGAACAAA +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARPLLVI*NDTTNK
Trigger: TTTGTTCGTTGTATCATTCCAAATCACGAGAAGAGG...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTGGCAAAGGCCTTTCTaGCCAGGTAACCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDWQRPF*PGNLCK
Trigger: TTTGCAGAGGTTACCTGGCCAGAAAGGCCTTTGCCA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACGTTGCTGCTGCTTCTTaGCAAAGGCCTTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHVAAAS*QRPFWP
Trigger: TGGCCAGAAAGGCCTTTGCCAAGAAGCAGCAGCAAC...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTCTTCTAAAAGCTGCTaGTGCTTCCGCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDSSKSC*CFRSIS
Trigger: GGAGATGGAGCGGAAGCACCAGCAGCTTTTAGAAGA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACCTTCTTCCAGAAGGGTaGAGACATTATCTAGCTCAT +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYLLPEG*RHYLAH
Trigger: ATGAGCTAGATAATGTCTCCACCCTTCTGGAAGAAG...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACGACGGACTAATTTGTTaGCGGCTGCTCGTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHDGLIC*RLLVPW
Trigger: CCAAGGAACGAGCAGCCGCCAACAAATTAGTCCGTC...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCATCTGCTCTTTATACTaGTCCGCGTGTCGACGCTCA +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITICSLY*SACRRS
Trigger: TGAGCGTCGACACGCGGACCAGTATAAAGAGCAGAT...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCATGGTAACCCCAAATaGGTGTTGCTTCCGATCCAG +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDHGNPK*VLLPIQ
Trigger: CTGGATCGGAAGCAACACCCATTTGGGGTTACCATG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCGTTCAAGTTCCCCCTaGTGTTTCACTGGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDRSSSP*CFTGLG
Trigger: GCCTAAACCAGTGAAACACCAGGGGGAACTTGAACG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTCCGTTACAGCGAAGCTaGTCTAGGACTAGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTPLQRS*SRTRCG
Trigger: TCCACACCTAGTCCTAGATCAGCTTCGCTGTAACGG...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTCTTCATCTTTGGCCTaGAGTTCTTCCTCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHSSSLA*SSSSWR
Trigger: TCGCCAGGAGGAAGAACTTCAGGCCAAAGATGAAGA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTCCTCTTCAGCCAGCTaGGAGGAACACTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTSSSAS*EEHSAM
Trigger: CATTGCTGAGTGTTCCTCTCAGCTGGCTGAAGAGGA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACCTTCTTGCTTATTCCTaGTTTTGGCCAAGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYLLAYS*FWPSFS
Trigger: CGAAAAACTTGGCCAAAATCAGGAATAAGCAAGAAG...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCGCCTTTTCCAGTTCCTaGCGAGTCTTTTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITAFSSS*RVFSSF
Trigger: GAAGGAAGAAAAGACTCGTCAGGAACTGGAAAAGGC...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGTTCGGCCTTGTTCCGTaGAGCCTTCTCGGATTCAAA +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLFGLVP*SLLGFK
Trigger: TTTGAATCCGAGAAGGCTTCACGGAACAAGGCCGAA...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTTCGGCCTTGTTCCGTaGAGCCTTCTCGGATTCAAA +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHFGLVP*SLLGFK
Trigger: TTTGAATCCGAGAAGGCTTCACGGAACAAGGCCGAA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTCCTCCTGCTGCTCCTaGAGACTGTTCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTSSCCS*RLFFSS
Trigger: AGAGGAGAAGAACAGTCTTCAGGAGCAGCAGGAGGA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCGGGCTCGCTCAGATaGGGCAAGTTCCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEAGSLR*GKFLLQ
Trigger: TTGCAGGAGGAACTTGCCTCATCTGAGCGAGCCCGC...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCTGCAACTTTACTCTaGCTGGGGTGGCTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCPATLL*LGWLRL
Trigger: GAGACGCAGCCACCCCAGTCAGAGTAAAGTTGCAGG...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACTGCAGAGCGACTGAGTaGCGACCACGGCGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDCRATE*RPRRCP
Trigger: GGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCA...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGTGCAGAGCGACTGAGTaGCGACCACGGCGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGCRATE*RPRRCP
Trigger: GGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCA...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTAGCATGCAGAGCGACTaGGTGACGACCACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCSMQSD*VTTTAL
Trigger: CAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCT...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACAGAATTGGATTTGCTTaGAAAAGCTGCCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYRIGFA*KSCRSS
Trigger: ACTTGAACGGCAGCTTTTGCAAGCAAATCCAATTCT...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAGAATTGGATTTGCTTaGAAAAGCTGCCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATRIGFA*KSCRSS
Trigger: ACTTGAACGGCAGCTTTTGCAAGCAAATCCAATTCT...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATAGATGGCAGAGCTTCTaGGCAACTGTATTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDRWQSF*ATVFSG
Trigger: GCCAGAAAATACAGTTGCGCAGAAGCTCTGCCATCT...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTCTCTATTAGGTCGATaGATGGCTGCAGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHSLLGR*MAADPA
Trigger: GGCTGGATCTGCAGCCATGCATCGACCTAATAGAGA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTTCTCTTCTAAAAGCTaGTGGTGCTTCCGCTCCATC +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITFSSKS*WCFRSI
Trigger: GATGGAGCGGAAGCACCAGCAGCTTTTAGAAGAGAA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTGCCCTCATCTCTTCTaGTTCAGCAAAGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITCPHLF*FSKELS
Trigger: ACTGAGCTCTTTGCTGAAGCAGAAGAGATGAGGGCA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGCTTGATCTTGGCCTCTaGTGTCACCTTTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLLDLGL*CHLFQL
Trigger: CAGCTGGAAAAGGTGACAGCAGAGGCCAAGATCAAG...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTTGGCCTGTTCCAGCTaGTCTGAGAGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCLACSS*SESSSR
Trigger: CCTGGAGGAGCTCTCAGAGCAGCTGGAACAGGCCAA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACATTCTGCAGCTTACTTaGTTTCTCCGCCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHILQLT*FLRQLH
Trigger: GTGGAGCTGGCGGAGAAAGCAAGTAAGCTGCAGAAT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGATTCTGCAGCTTACTTaGTTTCTCCGCCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLILQLT*FLRQLH
Trigger: GTGGAGCTGGCGGAGAAAGCAAGTAAGCTGCAGAAT...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACATGTCTGCTCGGAGCTaGTTGTTCTGCCTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHMSARS*LFCLSN
Trigger: GTTTGAGAGGCAGAACAAGCAGCTCCGAGCAGACAT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTGAGGTCTTCCATGTCTaGTCGGAGCTGCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTEVFHV*SELLVL
Trigger: CAGAACAAGCAGCTCCGAGCAGACATGGAAGACCTC...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGCAATTGAAGGATTTCTaGTTCCAGACTCTTCAATTT +
Preference number: 4 (lower is better)
Translates to: KVSMRARLAMGRGLPPARQLKDF*FQTLQF
Trigger: AAATTGAAGAGTCTGGAAGCAGAAATCCTTCAATTG...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTTCTGCCGCTCCAGTTaGTGGCGTGCATTGTCACTC +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCFCRSS*WRALSL
Trigger: GAGTGACAATGCACGCCAGCAACTGGAGCGGCAGAA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCAGCTGGCGTTTAAGCTaGTTCATCCGAGCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCSWRLS*FIRALA
Trigger: GGCCAACGCTCGGATGAAGCAGCTTAAACGCCAGCT...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTCGTCGCTTCTTCTTCTaGTTCCTCCAGCTGGCGTTT +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTRRFFF*FLQLAF
Trigger: AAACGCCAGCTGGAGGAAGCAGAAGAAGAAGCGACG...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTCTGACTGGGGTGGCTaGGTCTCGTTGACATCACTG +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCSDWGG*VSLTSL
Trigger: CAGTGATGTCAACGAGACGCAGCCACCCCAGTCAGA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACGTTCACATGAGTAGATaGGGGACACCATCGACTCGA +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHVHMSR*GTPSTR
Trigger: TCGAGTCGATGGTGTCCCGCATCTACTCATGTGAAC...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACCTGCGCCATTGTAAATaGAACGATCCAAAAGCAATT +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYLRHCK*NDPKAI
Trigger: AATTGCTTTTGGATCGTTCCATTTACAATGGCGCAG...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCCTGCGCCATTGTAAATaGAACGATCCAAAAGCAATT +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATLRHCK*NDPKAI
Trigger: AATTGCTTTTGGATCGTTCCATTTACAATGGCGCAG...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGGCTGCCTCAAAACCATaGCGTTCTGATGGAATCCAC +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLAASKP*RSDGIH
Trigger: GTGGATTCCATCAGAACGCCATGGTTTTGAGGCAGC...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACTGTGCATTGCTTCCATaGTCTCCTGGAAATTATCTT +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYCALLP*SPGNYL
Trigger: AAGATAATTTCCAGGAGACCATGGAAGCAATGCACA...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGAATCTGTCTGATGACTaGTGCAAAAGGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLNLSDD*CKRVAT
Trigger: CGTGGCCACCCTTTTGCACCAGTCATCAGACAGATT...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACAATCTGTCTGATGACTaGTGCAAAAGGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHNLSDD*CKRVAT
Trigger: CGTGGCCACCCTTTTGCACCAGTCATCAGACAGATT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTCAGAAGCTTCTTCTTaGCTTCTTCCAGACTTTCAA +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATSEASS*LLPDFQ
Trigger: TTGAAAGTCTGGAAGAAGCCAAGAAGAAGCTTCTGA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACGCGACCTGGCGCTGGTaGTCCAGGTCCACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDATWRW*SRSTVR
Trigger: CCTCACGGTGGACCTGGACCACCAGCGCCAGGTCGC...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACCCAGTGACAGGGCTTTaGTTTCTTTCTCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHPVTGL*FLSLWP
Trigger: AGGCCAGAGAGAAAGAAACCAAAGCCCTGTCACTGG...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTCTGCTTCCTCCAGCTaGCGTTTAAGCTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHSASSS*RLSCFI
Trigger: GATGAAGCAGCTTAAACGCCAGCTGGAGGAAGCAGA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGCCTTCAAGGTGCAGCTaGCGCCGGCCAGATCGGCTG +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPPSRCS*RRPDRL
Trigger: CAGCCGATCTGGCCGGCGCCAGCTGCACCTTGAAGG...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCAACATTCAGGAAGATaGCATCTGTTCTGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFQHSGR*HLFWRL
Trigger: GAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCAACATTCAGGAAGATaGCATCTGTTCTGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDQHSGR*HLFWRL
Trigger: GAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCCCCTGGTGTTTCACTaGTTTAGGCGATTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFPLVFH*FRRFRN
Trigger: ATTCCTGAATCGCCTAAACCAGTGAAACACCAGGGG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379980.8
3UTR CAA 72 bp CAAGTGCAGTTTAGAGTCCACAGTGGTCTAGGAGACTaGATGTGGCTGAGGAGTCGGGGGCCACGTGAACAC +
Preference number: 4 (lower is better)
Translates to: QVQFRVHSGLGD*MWLRSRGPREH
Trigger: GTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACCACTGTGGACTCTAAACTGCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCGTTCATCTTTTGCTTaGCGAACAGCACGAGACTTT +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITRSSFA*RTARDF
Trigger: AAAGTCTCGTGCTGTTCGTCAAGCAAAAGATGAACG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTACTACTTTAAGCATTaGCAGAATCTCTTCATGGGA +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATYYFKH*QNLFMG
Trigger: TCCCATGAAGAGATTCTGTCAATGCTTAAAGTAGTA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGTATCCAGAGCTTTATTaGTGCGATGAACGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLYPELY*CDERAS
Trigger: GCTGGCTCGTTCATCGCATCAATAAAGCTCTGGATA...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTATCCAGGATTCCAATaGAAGATGCTCCCTGACGTT +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFYPGFQ*KMLPDV
Trigger: AACGTCAGGGAGCATCTTTCATTGGAATCCTGGATA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCCAGAACTCCAGCTCTaGAAAATATCTTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFPELQL*KISCSV
Trigger: GACAGAGCAAGATATTTTTCAGAGCTGGAGTTCTGG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTGCGGCTTCACCTTTGTaGAGACTCGCCACCACTGCC +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCAASPL*RLATTA
Trigger: GGCAGTGGTGGCGAGTCTTCACAAAGGTGAAGCCGC...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTCCTCTTCAGCCAGCTaGGAGGAACACTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCSSSAS*EEHSAM
Trigger: CATTGCTGAGTGTTCCTCTCAGCTGGCTGAAGAGGA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGGCCTTTTCCAGTTCCTaGCGAGTCTTTTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLAFSSS*RVFSSF
Trigger: GAAGGAAGAAAAGACTCGTCAGGAACTGGAAAAGGC...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTGAGGGCCCGGGCCAGTaGCAGGGCTTTGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCEGPGQ*QGFGFF
Trigger: AAAGAAACCAAAGCCCTGTCACTGGCCCGGGCCCTC...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCGGTTACCTGTCTGTATaGCAGAGAGCATGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCGYLSV*QRACRA
Trigger: CGCTCTGCATGCTCTCTGTCATACAGACAGGTAACC...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCGCTCAAAGCAGCGGCTaGATTTGCAAGGTCAGCATG +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCAQSSG*ICKVSM
Trigger: CATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGC...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTCTGTAATACCACTTTaGCTAGAGAGGTACATGATA +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATSVIPL*LERYMI
Trigger: TATCATGTACCTCTCTAGTCAAAGTGGTATTACAGA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGCGATCCAAAAGCAATTaGCTCTTCAGCCGAAGATGG +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLRSKSN*LFSRRW
Trigger: CCATCTTCGGCTGAAGAGGCAATTGCTTTTGGATCG...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTCGAGTCCAGTTCTCTaGGCCATTGTAAATGGAACG +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHSSPVL*AIVNGT
Trigger: CGTTCCATTTACAATGGCGCAGAGAACTGGACTCGA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCATCTTTGTTGACCATTaGTTTCTTTCCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATIFVDH*FLSILC
Trigger: GCAGAGAATGGAAAGAAAGCAATGGTCAACAAAGAT...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATCTTTGTTGACCATTaGTTTCTTTCCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYIFVDH*FLSILC
Trigger: GCAGAGAATGGAAAGAAAGCAATGGTCAACAAAGAT...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAAGCATGTCAATTCTaGCATATCCTCCACCTTGGA +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITQACQF*HILHLG
Trigger: TCCAAGGTGGAGGATATGGCAGAATTGACATGCTTG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGGAGAAGCCCATTATGTaGATTGCTTCCATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLEKPIM*IASMVS
Trigger: GGAGACCATGGAAGCAATGCACATAATGGGCTTCTC...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTTCTACTGCAAAATCTaGCTGTTCTTTGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITFYCKI*LFFGLG
Trigger: GCCCAGACCAAAGAACAGGCAGATTTTGCAGTAGAA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCAAGACTCGCCACCACTaGCAGTGCCGTAATTTCAGG +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCKTRHH*QCRNFR
Trigger: CCTGAAATTACGGCACTGGCAGTGGTGGCGAGTCTT...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTTTAGCAGCAAGTCTTaGCCTCATCTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITFSSKS*PHLFCF
Trigger: GAAGCAGAAGAGATGAGGGCAAGACTTGCTGCTAAA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTCTGCGATCTGGTCCTaGAGGTCGGTCGTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPSAIWS*RSVVSP
Trigger: CGGGGAGACGACCGACCTGCAGGACCAGATCGCAGA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTTGAGCTCATCAATCTaGGCCTGCAGCTCTGCGATC +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCLSSSI*ACSSAI
Trigger: GATCGCAGAGCTGCAGGCGCAGATTGATGAGCTCAA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTCAGCCTTGACCTGCTaGAGGACCTTCACCTCACAC +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCSALTC*RTFTSH
Trigger: GTGTGAGGTGAAGGTCCTGCAGCAGGTCAAGGCTGA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTTGGAGCTCCTGGACCTaGGCGTCGAGCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCWSSWT*ASSFFL
Trigger: GAGGAAGAAGCTCGACGCGCAGGTCCAGGAGCTCCA...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATAATACCCTTCTTCTCTaGTTCTTCCAGAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDNTLLL*FFQKGG
Trigger: TCCACCCTTCTGGAAGAAGCAGAGAAGAAGGGTATT...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTTTGTCATACGCCAGTaGCTTCTCCTCCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCFVIRQ*LLLQAL
Trigger: CAGCGCCTGGAGGAGAAGGCACTGGCGTATGACAAA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCGAGGTCTTCCATGTCTaGTCGGAGCTGCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCEVFHV*SELLVL
Trigger: CAGAACAAGCAGCTCCGAGCAGACATGGAAGACCTC...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTTCTTCTCTTCATTCTaGTCATCCCTGGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDFFSSF*SSLVCR
Trigger: CCTGCAAACCAGGGATGAGCAGAATGAAGAGAAGAA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTGGAGCTTGCGGAGCTaGTTAATCACCTCATCCCGA +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCWSLRS*LITSSR
Trigger: TCGGGATGAGGTGATTAAGCAGCTCCGCAAGCTCCA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGAGCTCATCTCTCTCCTaGTCGGCGTGTCGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPSSSLS*SACRRA
Trigger: AGCCCGCCGACACGCCGAGCAGGAGAGAGATGAGCT...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTCAGCTTCTTCTCAGTaGGACGGACTAATTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFSASSQ*DGLICW
Trigger: CCAACAAATTAGTCCGTCGCACTGAGAAGAAGCTGA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCGCTCATCCTCAACCTaGATGAAGATTTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFRSSST*MKISFS
Trigger: GCTGAAAGAAATCTTCATGCAGGTTGAGGATGAGCG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCAATTTCCGAAATCTaGAGGAGGCCCCGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCPISEI*RRPRVH
Trigger: ATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGG...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATAGGAATCCCGTAGCTTaGCAATTTCCGAAATCTGCA +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDRNPVA*QFPKSA
Trigger: TGCAGATTTCGGAAATTGGCAAGCTACGGGATTCCT...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTACCTGGGGCCTCAGCTaGAGTGTGGCCACTATCCCT +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCTWGLS*SVATIP
Trigger: AGGGATAGTGGCCACACTGCAGCTGAGGCCCCAGGT...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAGAGATACCTCTCTaGATCCTCGAGTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFKEIPL*ILESSS
Trigger: AGAACTGGACTCGAGGATCCAGAGAGGTATCTCTTT...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCAAAGAGATACCTCTCTaGATCCTCGAGTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITKEIPL*ILESSS
Trigger: AGAACTGGACTCGAGGATCCAGAGAGGTATCTCTTT...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCATGCTCCCTGACGTTTaGTCCTATCCAGAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITMLPDV*SYPELY
Trigger: ATAAAGCTCTGGATAGGACCAAACGTCAGGGAGCAT...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCCTCTGCAAACGGCCTaGAAGAAGATAATGATATCG +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDPLQTA*KKIMIS
Trigger: CGATATCATTATCTTCTTCCAGGCCGTTTGCAGAGG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATACAGCTCTTCATCTTTaGCCTGAAGTTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDTALHL*PEVLPP
Trigger: AGGAGGAAGAACTTCAGGCCAAAGATGAAGAGCTGT...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTCTTCTAAAAGCTGCTaGTGCTTCCGCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTSSKSC*CFRSIS
Trigger: GGAGATGGAGCGGAAGCACCAGCAGCTTTTAGAAGA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTCCAGTGACAGGGCTTTaGTTTCTTTCTCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTPVTGL*FLSLWP
Trigger: AGGCCAGAGAGAAAGAAACCAAAGCCCTGTCACTGG...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGGCATTGTCACTCTTCTaGGCGGCGCTGCGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPALSLF*AALRSA
Trigger: AGCCGAGCGCAGCGCCGCCCAGAAGAGTGACAATGC...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCGCTTCATCCGAGCGTTaGCCTTCTCCATCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCASSER*PSPSAL
Trigger: AAGAGCAGATGGAGAAGGCCAACGCTCGGATGAAGC...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACCTGTATTGCCTCCTCTaGCTTCCTGCAACTTTACTC +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHLYCLL*LPATLL
Trigger: GAGTAAAGTTGCAGGAAGCCAGAGGAGGCAATACAG...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGCTAGGAGACTTGATGTaGCTGAGGAGTCGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLELGDLM*LRSRGP
Trigger: TGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAG...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTCATGGTAACCCCAAATaGGTGTTGCTTCCGATCCAG +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTHGNPK*VLLPIQ
Trigger: CTGGATCGGAAGCAACACCCATTTGGGGTTACCATG...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTGCCTCAGCTGCAGTGTaGCCACTATCCCTTCTATGC +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCASAAV*PLSLLC
Trigger: GCATAGAAGGGATAGTGGCCACACTGCAGCTGAGGC...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTTGCGGTCAGGTGTCTaGTGGTCAACAGCCAGTACA +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCLRSGV*WSTAST
Trigger: TGTACTGGCTGTTGACCACCAGACACCTGACCGCAA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGAGTCTCGGCCGACCTTaGTCCGGGGAGTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGSLGRP*SGESGW
Trigger: CCATCCTGACTCCCCGGATCAAGGTCGGCCGAGACT...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACAGTCTCGGCCGACCTTaGTCCGGGGAGTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDSLGRP*SGESGW
Trigger: CCATCCTGACTCCCCGGATCAAGGTCGGCCGAGACT...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCGCTTTATTGATGCGATaGACGAGCCAGCGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCALLMR*TSQRKS
Trigger: GCTCTTTCGCTGGCTCGTTCATCGCATCAATAAAGC...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTATGAAAGATGCTCCCTaGCGTTTGGTCCTATCCAGA +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTMKDAP*RLVLSR
Trigger: TCTGGATAGGACCAAACGTCAGGGAGCATCTTTCAT...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTATCCAGGATTCCAATaGAAGATGCTCCCTGACGTT +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHYPGFQ*KMLPDV
Trigger: AACGTCAGGGAGCATCTTTCATTGGAATCCTGGATA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACAATTGTCGAGGTTTCTaGAACTTGGAGTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHNCRGF*NLEWEP
Trigger: AGGTTCCCACTCCAAGTTTCAGAAACCTCGACAATT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTCTCAGTCATACCAGTaGCTTGATCCAGACCCACGA +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCSQSYQ*LDPDPR
Trigger: TCGTGGGTCTGGATCAAGTCACTGGTATGACTGAGA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTCCAGCCCTCTTCTCGTaGTTTGGAATGATACAACGA +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTPALFS*FGMIQR
Trigger: TCGTTGTATCATTCCAAATCACGAGAAGAGGGCTGG...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTCCTCTTCAGCCAGCTaGGAGGAACACTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCSSSAS*EEHSAM
Trigger: CATTGCTGAGTGTTCCTCTCAGCTGGCTGAAGAGGA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCTCATGTCCTGGATTTaGGCTTCATGGTTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFLMSWI*ASWFLV
Trigger: AACTAAGAACCATGAAGCTCAAATCCAGGACATGAG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACGCCTTAAGACACAGTTaGTCTTTCAGGAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHALRHS*SFRKES
Trigger: GGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGC...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTATCTGGAAGTCTACATaGTCCATGGCTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCIWKST*SMAATW
Trigger: CCAGGTGGCAGCCATGGATCATGTAGACTTCCAGAT...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTCGAGTCCAGTTCTCTaGGCCATTGTAAATGGAACG +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTSSPVL*AIVNGT
Trigger: CGTTCCATTTACAATGGCGCAGAGAACTGGACTCGA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTTCTTTGATACTAGCTaGCTCAAAACCATGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDFFDTS*LKTMAF
Trigger: GAACGCCATGGTTTTGAGGCAGCTAGTATCAAAGAA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTTCCAGAATTGGATTTaGTTGCAAAAGCTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDFQNWI*LQKLPF
Trigger: GAACGGCAGCTTTTGCAAGCAAATCCAATTCTGGAA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTGCCCATTATGTGCATTaGTTCCATGGTCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTAHYVH*FHGLLE
Trigger: TTCCAGGAGACCATGGAAGCAATGCACATAATGGGC...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCATAGTCCACCTTCCCTaGATAATGTATAATGCAAAA +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATIVHLP*IMYNAK
Trigger: TTTTGCATTATACATTATGCAGGGAAGGTGGACTAT...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTTTAAGGCACTTAGTTaGTGCTGCTTCTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFFKALS*CCFLAK
Trigger: CTTTGCCAAGAAGCAGCAGCAACTAAGTGCCTTAAA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTCTAAAAGCTGCTGGTaGTTCCGCTCCATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCSKSCW*FRSISS
Trigger: GGAGGAGATGGAGCGGAAGCACCAGCAGCTTTTAGA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTTTAGCAGCAAGTCTTaGCCTCATCTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHFSSKS*PHLFCF
Trigger: GAAGCAGAAGAGATGAGGGCAAGACTTGCTGCTAAA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACCTGCGCCTGCAGCTCTaGGATCTGGTCCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDLRLQL*DLVLQV
Trigger: GACCTGCAGGACCAGATCGCAGAGCTGCAGGCGCAG...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTTTCTCCTCTTCCAGCTaGCGGATCCGACTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCFSSSS*RIRLLR
Trigger: CCTGAGCAGTCGGATCCGGCAGCTGGAAGAGGAGAA...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTGCTCATCCCTGGTTTaGAGGTCTCTCTCGAACTGC +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCCSSLV*RSLSNC
Trigger: GCAGTTCGAGAGAGACCTGCAAACCAGGGATGAGCA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTTCTTCTCTTCATTCTaGTCATCCCTGGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHFFSSF*SSLVCR
Trigger: CCTGCAAACCAGGGATGAGCAGAATGAAGAGAAGAA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCCAATTGAAGGATTTCTaGTTCCAGACTCTTCAATTT +
Preference number: 4 (lower is better)
Translates to: ERLSDDHGAAPITQRPATQLKDF*FQTLQF
Trigger: AAATTGAAGAGTCTGGAAGCAGAAATCCTTCAATTG...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGCTCCTCCTCCAGCTGTaGGATCCGAGCTTCCAGACG +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPLLLQL*DPSFQT
Trigger: CGTCTGGAAGCTCGGATCGCACAGCTGGAGGAGGAG...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGAGCTCCATGTTGCTCTaGTCCTCTTCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLESSMLL*SSSSSS
Trigger: GGAGGAGCTGGAAGAGGAGCAGAGCAACATGGAGCT...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGTCAGCTTCTTCTCAGTaGGACGGACTAATTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLSASSQ*DGLICW
Trigger: CCAACAAATTAGTCCGTCGCACTGAGAAGAAGCTGA...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGGAAGCTCCTTCAAGGTaGAGCTGGCGCCGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPEAPSR*SWRRPD
Trigger: ATCTGGCCGGCGCCAGCTGCACCTTGAAGGAGCTTC...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTTTGCTTGCAAAAGCTaGCGTTCAAGTTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCFACKS*RSSSPW
Trigger: CCAGGGGGAACTTGAACGGCAGCTTTTGCAAGCAAA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACAAAGAGATACCTCTCTaGATCCTCGAGTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHKEIPL*ILESSS
Trigger: AGAACTGGACTCGAGGATCCAGAGAGGTATCTCTTT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTATAGCATAGATGTGTaGAGGCATCTCATGACGCTT +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFYSIDV*RHLMTL
Trigger: AAGCGTCATGAGATGCCTCCACACATCTATGCTATA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCGCAACTGTATTTTCTaGCATGGAAGCTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDRNCIF*HGSLIS
Trigger: ACTGATCAAGCTTCCATGCCAGAAAATACAGTTGCG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTTCATCCCAAGAAGATaGCAGAGCTTCTGCGCAACT +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTFIPRR*QSFCAT
Trigger: AGTTGCGCAGAAGCTCTGCCATCTTCTTGGGATGAA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTGAAACATGCCCTTCTTaGTTTTATATGCGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFETCPS*FYMRSQ
Trigger: TTGGCTCCGCATATAAAACCAAGAAGGGCATGTTTC...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGAAACATGCCCTTCTTaGTTTTATATGCGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDETCPS*FYMRSQ
Trigger: TTGGCTCCGCATATAAAACCAAGAAGGGCATGTTTC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGCCTCTGCAAACGGCCTaGAAGAAGATAATGATATCG +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLPLQTA*KKIMIS
Trigger: CGATATCATTATCTTCTTCCAGGCCGTTTGCAGAGG...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGGTACGTAGTTCCTGCTaGGCTGCCGTGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPVRSSC*AAVVSS
Trigger: GCTGGACACCACGGCAGCCCAGCAGGAACTACGTAC...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCTTCTTCCAGAAGGGTaGAGACATTATCTAGCTCAT +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDLLPEG*RHYLAH
Trigger: ATGAGCTAGATAATGTCTCCACCCTTCTGGAAGAAG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCATCTACTTTCTTCTTaGTATCAGCCAACTGGGACT +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDHLLSS*YQPTGT
Trigger: AGTCCCAGTTGGCTGATACCAAGAAGAAAGTAGATG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCATCTACTTTCTTCTTaGTATCAGCCAACTGGGACT +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFHLLSS*YQPTGT
Trigger: AGTCCCAGTTGGCTGATACCAAGAAGAAAGTAGATG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTCTTCTGCTAACAGCTaGTCAAACTTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITSSANS*SNFFCF
Trigger: GAAGCAGAAGAAGTTTGACCAGCTGTTAGCAGAAGA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTCTCAAACTCCTCCTTaGCCTCCAGGGCTTCCTCGA +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLESQTPP*PPGLPR
Trigger: TCGAGGAAGCCCTGGAGGCCAAGGAGGAGTTTGAGA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCATTCTGCTCATCCCTaGTTTGCAGGTCTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCHSAHP*FAGLSR
Trigger: TCGAGAGAGACCTGCAAACCAGGGATGAGCAGAATG...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTGTCCACCTGTAGAGTaGTCTTGCGGAAGCGGTCGT +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLECPPVE*SCGSGR
Trigger: ACGACCGCTTCCGCAAGACCACTCTACAGGTGGACA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGCCTCGTTGGCCTCGGTaGCATCATCCAGTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPPRWPR*HHPVPA
Trigger: AGCGGGAACTGGATGATGCCACCGAGGCCAACGAGG...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACGGCTCAGGCCCTCGTTaGCCTCGGTGGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDGSGPR*PRWHHP
Trigger: TGGATGATGCCACCGAGGCCAACGAGGGCCTGAGCC...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCAACTTTACTCTGACTaGGGTGGCTGCGTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCQLYSD*GGCVSL
Trigger: CAACGAGACGCAGCCACCCCAGTCAGAGTAAAGTTG...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTCTAGGAGACTTGATGTaGCTGAGGAGTCGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCLGDLM*LRSRGP
Trigger: TGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAG...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTGGCAGGGTTGTAGATaGCAGCCCTGTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEWQGCR*QPCPQR
Trigger: TCTTTGTGGACAGGGCTGTCATCTACAACCCTGCCA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGTCATACCAGTGACTTaGTCCAGACCCACGATACGG +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEVIPVT*SRPTIR
Trigger: CCGTATCGTGGGTCTGGATCAAGTCACTGGTATGAC...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTCTCAGTCATACCAGTaGCTTGATCCAGACCCACGA +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCSQSYQ*LDPDPR
Trigger: TCGTGGGTCTGGATCAAGTCACTGGTATGACTGAGA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGTTGCCATCAGCTTGGTaGGAGATTCTTTGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLLPSAW*EILCRV
Trigger: AACTCTACAAAGAATCTCTCACCAAGCTGATGGCAA...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTCCAGAACTCCAGCTCTaGAAAATATCTTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTPELQL*KISCSV
Trigger: GACAGAGCAAGATATTTTTCAGAGCTGGAGTTCTGG...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTCTTCATCTTTGGCCTaGAGTTCTTCCTCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCSSSLA*SSSSWR
Trigger: TCGCCAGGAGGAAGAACTTCAGGCCAAAGATGAAGA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCTTCTTGCTTATTCCTaGTTTTGGCCAAGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITLLAYS*FWPSFS
Trigger: CGAAAAACTTGGCCAAAATCAGGAATAAGCAAGAAG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCGCCTTTTCCAGTTCCTaGCGAGTCTTTTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCAFSSS*RVFSSF
Trigger: GAAGGAAGAAAAGACTCGTCAGGAACTGGAAAAGGC...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTGTGTATCCTGTAGTTaGGACTCAAGACTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTCVSCS*DSRLAA
Trigger: TGCAGCTAGTCTTGAGTCTCAACTACAGGATACACA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGGCGGGCTCGCTCAGATaGGGCAAGTTCCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGAGSLR*GKFLLQ
Trigger: TTGCAGGAGGAACTTGCCTCATCTGAGCGAGCCCGC...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTGCCTTAAGACACAGTTaGTCTTTCAGGAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTALRHS*SFRKES
Trigger: GGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGC...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCGATCCAAAAGCAATTaGCTCTTCAGCCGAAGATGG +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCRSKSN*LFSRRW
Trigger: CCATCTTCGGCTGAAGAGGCAATTGCTTTTGGATCG...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGTTCTTTGATACTAGCTaGCTCAAAACCATGGCGTTC +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLFFDTS*LKTMAF
Trigger: GAACGCCATGGTTTTGAGGCAGCTAGTATCAAAGAA...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTTTCTTTCCATTCTCTaGCAACTCCACCATAACTTC +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITFLSIL*QLHHNF
Trigger: GAAGTTATGGTGGAGTTGGCAGAGAATGGAAAGAAA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTTTCTTTCCATTCTCTaGCAACTCCACCATAACTTC +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFFLSIL*QLHHNF
Trigger: GAAGTTATGGTGGAGTTGGCAGAGAATGGAAAGAAA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTGCCAATGCTTCTACTaGAAAATCTGCCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDCQCFY*KICLFF
Trigger: AAAGAACAGGCAGATTTTGCAGTAGAAGCATTGGCA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAACGGTACGAAACATaGCCTTCTTGGTTTTATATG +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITQRYET*PSWFYM
Trigger: CATATAAAACCAAGAAGGGCATGTTTCGTACCGTTG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTGGCCAGGTAACCTCTaGAAACGGCCTGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEWPGNL*KRPGRR
Trigger: TCTTCTTCCAGGCCGTTTGCAGAGGTTACCTGGCCA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTTCATCAATCTGCGCCTaGAGCTCTGCGATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCSSICA*SSAIWS
Trigger: GGACCAGATCGCAGAGCTGCAGGCGCAGATTGATGA...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGAGCTTTCTTCAGCTCTaGCACTTCTTGTTCACGTTT +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLSFLQL*HFLFTF
Trigger: AAACGTGAACAAGAAGTGGCAGAGCTGAAGAAAGCT...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACTGGAGCTCCTGGACCTaGGCGTCGAGCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDWSSWT*ASSFFL
Trigger: GAGGAAGAAGCTCGACGCGCAGGTCCAGGAGCTCCA...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTTCTCCTCTTCCAGCTaGCGGATCCGACTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPFSSSS*RIRLLR
Trigger: CCTGAGCAGTCGGATCCGGCAGCTGGAAGAGGAGAA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTCTCCAGTTGCTGGCGTaGATTGTCACTCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCLQLLA*IVTLLG
Trigger: GCCCAGAAGAGTGACAATGCACGCCAGCAACTGGAG...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGGCACCCTCGAGTTCCTaGAGCTTGGCCTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGAPSSS*SLAFSS
Trigger: GGAGCTGAAGGCCAAGCTGCAGGAACTCGAGGGTGC...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACGAAGCTCCTTCAAGGTaGAGCTGGCGCCGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDEAPSR*SWRRPD
Trigger: ATCTGGCCGGCGCCAGCTGCACCTTGAAGGAGCTTC...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTAAGCAGGATACAGTATaGATAGGCTGGAGAGCCTTA +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTKQDTV*IGWRAL
Trigger: TAAGGCTCTCCAGCCTATGCATACTGTATCCTGCTT...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACAATGAGAGAGACAAGTaGAGTTTAGAGTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHNERDK*SLESTV
Trigger: CACTGTGGACTCTAAACTGCACTTGTCTCTCTCATT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGACCTGGGGCCTCAGCTaGAGTGTGGCCACTATCCCT +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGTWGLS*SVATIP
Trigger: AGGGATAGTGGCCACACTGCAGCTGAGGCCCCAGGT...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTATAGCATAGATGTGTaGAGGCATCTCATGACGCTT +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHYSIDV*RHLMTL
Trigger: AAGCGTCATGAGATGCCTCCACACATCTATGCTATA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTGACAGAATCTCTTCATaGGAGAAGCCCATTATGTGC +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTDRISS*EKPIMC
Trigger: GCACATAATGGGCTTCTCCCATGAAGAGATTCTGTC...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTGAGGTTTCTGAAACTTaGAGTGGGAACCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTEVSET*SGNLAL
Trigger: AAGAGCAAGGTTCCCACTCCAAGTTTCAGAAACCTC...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTGGCAAAGGCCTTTCTaGCCAGGTAACCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCWQRPF*PGNLCK
Trigger: TTTGCAGAGGTTACCTGGCCAGAAAGGCCTTTGCCA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGTTGCTGCTGCTTCTTaGCAAAGGCCTTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEVAAAS*QRPFWP
Trigger: TGGCCAGAAAGGCCTTTGCCAAGAAGCAGCAGCAAC...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTCTTCTAAAAGCTGCTaGTGCTTCCGCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCSSKSC*CFRSIS
Trigger: GGAGATGGAGCGGAAGCACCAGCAGCTTTTAGAAGA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTATGAACTTGGAATTTTaGTCCTCGAGAAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFMNLEF*SSRSRI
Trigger: GATTCTGCTTCTCGAGGACCAAAATTCCAAGTTCAT...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTTCTCAAACTCCTCCTTaGCCTCCAGGGCTTCCTCGA +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCSQTPP*PPGLPR
Trigger: TCGAGGAAGCCCTGGAGGCCAAGGAGGAGTTTGAGA...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTTTCGCAGCCTCGATTTaGGCTTCGAGGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCFAASI*ASRSFR
Trigger: CCTGAAGGACCTCGAAGCCCAAATCGAGGCTGCGAA...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTAGATGGCATCTGTTCTaGAGGCTCCATAAACCTCAT +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTRWHLF*RLHKPH
Trigger: ATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCT...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCAACATTCAGGAAGATaGCATCTGTTCTGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCQHSGR*HLFWRL
Trigger: GAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTG...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGCCCCTGGTGTTTCACTaGTTTAGGCGATTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEPLVFH*FRRFLR
Trigger: CCTCAGGAATCGCCTAAACCAGTGAAACACCAGGGG...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360416.8
CDS-3UTR CCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTGATACGGTCCACTGGTaGCTCATGAAGACCAGAAAC +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCDTVHW*LMKTRN
Trigger: GTTTCTGGTCTTCATGAGCCACCAGTGGACCGTATC...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360416.8
CDS-3UTR TCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTATCCAGAGCTTTATTaGTGCGATGAACGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCYPELY*CDERAS
Trigger: GCTGGCTCGTTCATCGCATCAATAAAGCTCTGGATA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTATGAAAGATGCTCCCTaGCGTTTGGTCCTATCCAGA +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCMKDAP*RLVLSR
Trigger: TCTGGATAGGACCAAACGTCAGGGAGCATCTTTCAT...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTCTCATATCTCTGTCTaGATTCCTGGAAAACTATTC +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFSHISV*IPGKLF
Trigger: GAATAGTTTTCCAGGAATTCAGACAGAGATATGAGA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACGCTCCCGCACCTGTTTaGTCAGCAGCCGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDAPAPV*SAAASS
Trigger: AGAAGAAGCGGCTGCTGATCAAACAGGTGCGGGAGC...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTCAAGGCCAGTTCACATaGGTAGATGCGGGACACCAT +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCQGQFT*VDAGHH
Trigger: ATGGTGTCCCGCATCTACTCATGTGAACTGGCCTTG...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATACGGCTGCTTGCTCCTaGCGTGAGGAGGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDTAACS*REEGAG
Trigger: GCCGGCGCCCTCCTCACGTCAGGAGCAAGCAGCCGT...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACGAGAGGTACATGATATaGAGCACAGTCAAAACTGAA +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHERYMI*STVKTE
Trigger: TTCAGTTTTGACTGTGCTTCATATCATGTACCTCTC...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCTGATTCATTGTCACTaGATGTCTGTAATACCACTT +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFLIHCH*MSVIPL
Trigger: AAGTGGTATTACAGACATTCAGTGACAATGAATCAG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATATCTTTGTTGACCATTaGTTTCTTTCCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDIFVDH*FLSILC
Trigger: GCAGAGAATGGAAAGAAAGCAATGGTCAACAAAGAT...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTGCCCATTATGTGCATTaGTTCCATGGTCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCAHYVH*FHGLLE
Trigger: TTCCAGGAGACCATGGAAGCAATGCACATAATGGGC...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCGATTCCAATGAAAGATaGTCCCTGACGTTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCDSNER*SLTFGP
Trigger: AGGACCAAACGTCAGGGAGCATCTTTCATTGGAATC...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGGTGTTTCGGAGAGTTaGCATCAGCTTGGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEGVSES*HQLGER
Trigger: TCTCTCACCAAGCTGATGGCAACTCTCCGAAACACC...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTGCCCTCATCTCTTCTaGTTCAGCAAAGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCCPHLF*FSKELS
Trigger: ACTGAGCTCTTTGCTGAAGCAGAAGAGATGAGGGCA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTCATCAATCTGCGCCTaGAGCTCTGCGATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPSSICA*SSAIWS
Trigger: GGACCAGATCGCAGAGCTGCAGGCGCAGATTGATGA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTTGGAGCTTGCGGAGCTaGTTAATCACCTCATCCCGA +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCWSLRS*LITSSR
Trigger: TCGGGATGAGGTGATTAAGCAGCTCCGCAAGCTCCA...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCGCTCATCCTCAACCTaGATGAAGATTTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCRSSST*MKISFS
Trigger: GCTGAAAGAAATCTTCATGCAGGTTGAGGATGAGCG...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGAGCTGGCGTTTAAGCTaGTTCATCCGAGCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPSWRLS*FIRALA
Trigger: GGCCAACGCTCGGATGAAGCAGCTTAAACGCCAGCT...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTCGTCGCTTCTTCTTCTaGTTCCTCCAGCTGGCGTTT +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCRRFFF*FLQLAF
Trigger: AAACGCCAGCTGGAGGAAGCAGAAGAAGAAGCGACG...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACGAGTTTACGCCGAGATaGGTTGGCACGCGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDEFTPR*VGTRRF
Trigger: GAAGCGACGCGTGCCAACGCATCTCGGCGTAAACTC...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTCCTCCTCTGGCTTCCTaGAACTTTACTCTGACTGGG +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCPPLAS*NFTLTG
Trigger: CCCAGTCAGAGTAAAGTTGCAGGAAGCCAGAGGAGG...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGCTGCGCCATTGTAAATaGAACGATCCAAAAGCAATT +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLLRHCK*NDPKAI
Trigger: AATTGCTTTTGGATCGTTCCATTTACAATGGCGCAG...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTACTGGTGCAAAAGGGTaGCCACGTTGTCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCTGAKG*PRCHSG
Trigger: CCCTGAATGACAACGTGGCCACCCTTTTGCACCAGT...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCACAGCTCTTCATCTTTaGCCTGAAGTTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCTALHL*PEVLPP
Trigger: AGGAGGAAGAACTTCAGGCCAAAGATGAAGAGCTGT...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACAGGGCATTGTTCTTATaGAGTGTTTCATCATCACCT +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHRALFL*SVSSSP
Trigger: AGGTGATGATGAAACACTCCATAAGAACAATGCCCT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACCGCCTTCAGAGACCTTaGCATGGAGCTCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDRLQRP*HGAPGP
Trigger: AGGTCCAGGAGCTCCATGCCAAGGTCTCTGAAGGCG...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGGCATCTTCCGTGGCCTaGAGTTCGTCTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGASSVA*SSSSSS
Trigger: GGAGCTGGAAGACGAACTCCAGGCCACGGAAGATGC...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACGCATCTTCCGTGGCCTaGAGTTCGTCTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDASSVA*SSSSSS
Trigger: GGAGCTGGAAGACGAACTCCAGGCCACGGAAGATGC...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGCGGCTGCTCGTTCCTTaGCTTCCTGCTCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGRLLVP*LPAQAA
Trigger: AGCAGCTTGAGCAGGAAGCCAAGGAACGAGCAGCCG...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTACGCCGAGATGCGTTaGCACGCGTCGCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPYAEMR*HASLLL
Trigger: AAGAAGAAGCGACGCGTGCCAACGCATCTCGGCGTA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGCTAGGAGACTTGATGTaGCTGAGGAGTCGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGLGDLM*LRSRGP
Trigger: TGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAG...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGCATGGTAACCCCAAATaGGTGTTGCTTCCGATCCAG +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEHGNPK*VLLPIQ
Trigger: CTGGATCGGAAGCAACACCCATTTGGGGTTACCATG...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTCTTCTTGCTTATTCCTaGTTTTGGCCAAGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTLLAYS*FWPSFS
Trigger: CGAAAAACTTGGCCAAAATCAGGAATAAGCAAGAAG...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTGTGGCTGCGTCTCGTTaGCATCACTGGTCTTACTTT +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCVAASR*HHWSYF
Trigger: AAAGTAAGACCAGTGATGTCAACGAGACGCAGCCAC...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATTGCTTGCTCCTGACGTaGGGAGGGCGCCGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDCLLLT*GGRRQS
Trigger: GCTCTGCCGGCGCCCTCCTCACGTCAGGAGCAAGCA...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCAAGCATGTCAATTCTaGCATATCCTCCACCTTGGA +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCQACQF*HILHLG
Trigger: TCCAAGGTGGAGGATATGGCAGAATTGACATGCTTG...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTAGAATTGGATTTGCTTaGAAAAGCTGCCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTRIGFA*KSCRSS
Trigger: ACTTGAACGGCAGCTTTTGCAAGCAAATCCAATTCT...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCAGTACGTTCATCTTTTaGTTGACGAACAGCACGAGA +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCSTFIF*LTNSTR
Trigger: TCTCGTGCTGTTCGTCAAGCAAAAGATGAACGTACT...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTTCTACTGCAAAATCTaGCTGTTCTTTGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCFYCKI*LFFGLG
Trigger: GCCCAGACCAAAGAACAGGCAGATTTTGCAGTAGAA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTGGCCAGGTAACCTCTaGAAACGGCCTGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPWPGNL*KRPGRR
Trigger: TCTTCTTCCAGGCCGTTTGCAGAGGTTACCTGGCCA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGAAGACTCGCCACCACTaGCAGTGCCGTAATTTCAGG +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPKTRHH*QCRNFR
Trigger: CCTGAAATTACGGCACTGGCAGTGGTGGCGAGTCTT...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTTCTCTTCTAAAAGCTaGTGGTGCTTCCGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEFSSKS*WCFRSI
Trigger: GATGGAGCGGAAGCACCAGCAGCTTTTAGAAGAGAA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTGCCCTCATCTCTTCTaGTTCAGCAAAGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLECPHLF*FSKELS
Trigger: ACTGAGCTCTTTGCTGAAGCAGAAGAGATGAGGGCA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTATCTCTTCTAATTCCTaGTTTTTAGCAGCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFISSNS*FLAASL
Trigger: AAGACTTGCTGCTAAAAAGCAGGAATTAGAAGAGAT...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTCTTGATCTTGGCCTCTaGTGTCACCTTTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCLDLGL*CHLFQL
Trigger: CAGCTGGAAAAGGTGACAGCAGAGGCCAAGATCAAG...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTTGAGCTCATCAATCTaGGCCTGCAGCTCTGCGATC +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPLSSSI*ACSSAI
Trigger: GATCGCAGAGCTGCAGGCGCAGATTGATGAGCTCAA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACTTTGTACGTAGTTCCTaGTGGGCTGCCGTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDFVRSS*WAAVVS
Trigger: GGACACCACGGCAGCCCAGCAGGAACTACGTACAAA...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACTCAGCCTTGACCTGCTaGAGGACCTTCACCTCACAC +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDSALTC*RTFTSH
Trigger: GTGTGAGGTGAAGGTCCTGCAGCAGGTCAAGGCTGA...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCAGACTCAAGACTAGCTaGATCCTTAGCAAATTTAAT +
Preference number: 4 (lower is better)
Translates to: DREHAERLSDDHGAAPITRLKTS*ILSKFN
Trigger: ATTAAATTTGCTAAGGATGCAGCTAGTCTTGAGTCT...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGAGCTCCATGTTGCTCTaGTCCTCTTCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGSSMLL*SSSSSS
Trigger: GGAGGAGCTGGAAGAGGAGCAGAGCAACATGGAGCT...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACCTCCAGTTGCTGGCGTaGATTGTCACTCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDLQLLA*IVTLLG
Trigger: GCCCAGAAGAGTGACAATGCACGCCAGCAACTGGAG...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCGCTTCCATGGTCTCCTaGAAATTATCTTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCASMVS*KLSLSC
Trigger: GCAAGACAAAGATAATTTCCAGGAGACCATGGAAGC...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTGTGCATTGCTTCCATaGTCTCCTGGAAATTATCTT +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTCALLP*SPGNYL
Trigger: AAGATAATTTCCAGGAGACCATGGAAGCAATGCACA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTGACAGAATCTCTTCATaGGAGAAGCCCATTATGTGC +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCDRISS*EKPIMC
Trigger: GCACATAATGGGCTTCTCCCATGAAGAGATTCTGTC...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCGCAACTGTATTTTCTaGCATGGAAGCTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCRNCIF*HGSLIS
Trigger: ACTGATCAAGCTTCCATGCCAGAAAATACAGTTGCG...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACCCTCTTCTCGTGATTTaGAATGATACAACGAACAAA +
Preference number: 4 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHPLLVI*NDTTNK
Trigger: TTTGTTCGTTGTATCATTCCAAATCACGAGAAGAGG...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCTCTGCAAACGGCCTaGAAGAAGATAATGATATCG +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCPLQTA*KKIMIS
Trigger: CGATATCATTATCTTCTTCCAGGCCGTTTGCAGAGG...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTATGAACTTGGAATTTTaGTCCTCGAGAAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTMNLEF*SSRSRI
Trigger: GATTCTGCTTCTCGAGGACCAAAATTCCAAGTTCAT...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGTTGGTATCAGCCAACTaGGACTGCAGGGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGLVSAN*DCRAST
Trigger: AGTGCTGGCCCTGCAGTCCCAGTTGGCTGATACCAA...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTCTTCTGCTAACAGCTaGTCAAACTTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCSSANS*SNFFCF
Trigger: GAAGCAGAAGAAGTTTGACCAGCTGTTAGCAGAAGA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGTCATCCAGTTCCCGCTaGAGTTTACGCCGAGATGCG +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGSSSSR*SLRRDA
Trigger: CGCATCTCGGCGTAAACTCCAGCGGGAACTGGATGA...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACGCCTCAGCTGCAGTGTaGCCACTATCCCTTCTATGC +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDASAAV*PLSLLC
Trigger: GCATAGAAGGGATAGTGGCCACACTGCAGCTGAGGC...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTAGATGGCATCTGTTCTaGAGGCTCCATAAACCTCAT +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCRWHLF*RLHKPH
Trigger: ATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCT...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTCGTTCAAGTTCCCCCTaGTGTTTCACTGGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCRSSSP*CFTGLG
Trigger: GCCTAAACCAGTGAAACACCAGGGGGAACTTGAACG...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGGCTTTATTGATGCGATaGACGAGCCAGCGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPALLMR*TSQRKS
Trigger: GCTCTTTCGCTGGCTCGTTCATCGCATCAATAAAGC...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACGTCATACCAGTGACTTaGTCCAGACCCACGATACGG +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDVIPVT*SRPTIR
Trigger: CCGTATCGTGGGTCTGGATCAAGTCACTGGTATGAC...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCTCATGTCCTGGATTTaGGCTTCATGGTTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCLMSWI*ASWFLV
Trigger: AACTAAGAACCATGAAGCTCAAATCCAGGACATGAG...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTGTGTATCCTGTAGTTaGGACTCAAGACTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLECVSCS*DSRLAA
Trigger: TGCAGCTAGTCTTGAGTCTCAACTACAGGATACACA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACTCCTCCTGCTGCTCCTaGAGACTGTTCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDSSCCS*RLFFSS
Trigger: AGAGGAGAAGAACAGTCTTCAGGAGCAGCAGGAGGA...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTCTGATTCATTGTCACTaGATGTCTGTAATACCACTT +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTLIHCH*MSVIPL
Trigger: AAGTGGTATTACAGACATTCAGTGACAATGAATCAG...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTCCACTGGTGGCTCATaGAGACCAGAAACACTGTCA +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPSTGGS*RPETLS
Trigger: TGACAGTGTTTCTGGTCTTCATGAGCCACCAGTGGA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360416.8
CDS-3UTR GCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTAGATGGCAGAGCTTCTaGGCAACTGTATTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCRWQSF*ATVFSG
Trigger: GCCAGAAAATACAGTTGCGCAGAAGCTCTGCCATCT...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTCTCTATTAGGTCGATaGATGGCTGCAGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPSLLGR*MAADPA
Trigger: GGCTGGATCTGCAGCCATGCATCGACCTAATAGAGA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTAGCTTTCTTCAGCTCTaGCACTTCTTGTTCACGTTT +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCSFLQL*HFLFTF
Trigger: AAACGTGAACAAGAAGTGGCAGAGCTGAAGAAAGCT...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGCAATTGAAGGATTTCTaGTTCCAGACTCTTCAATTT +
Preference number: 4 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLQLKDF*FQTLQF
Trigger: AAATTGAAGAGTCTGGAAGCAGAAATCCTTCAATTG...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTTTGCTTGCAAAAGCTaGCGTTCAAGTTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPFACKS*RSSSPW
Trigger: CCAGGGGGAACTTGAACGGCAGCTTTTGCAAGCAAA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGGTATGTTTCAATGTTaGCCCCAACGATATAGCCAG +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEGMFQC*PQRYSQ
Trigger: CTGGCTATATCGTTGGGGCCAACATTGAAACATACC...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCAGGGCATTGTTCTTATaGAGTGTTTCATCATCACCT +
Preference number: 4 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCRALFL*SVSSSP
Trigger: AGGTGATGATGAAACACTCCATAAGAACAATGCCCT...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACTTGCGGTCAGGTGTCTaGTGGTCAACAGCCAGTACA +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDLRSGV*WSTAST
Trigger: TGTACTGGCTGTTGACCACCAGACACCTGACCGCAA...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR CAA 72 bp GGAACAAGCCTCGGACACAAAACCAATATTCCCATTTaGGGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GTSLGHKTNIPI*GSKQRLNLQGQ
Trigger: CTGACCTTGCAAATTCAGCCGCTGCTTTGAGCCCAAAATGGGAATATTGGTTTTGTGTCCGAGGCTTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTATCCAGAGCTTTATTaGTGCGATGAACGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPYPELY*CDERAS
Trigger: GCTGGCTCGTTCATCGCATCAATAAAGCTCTGGATA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTAATTGTCGAGGTTTCTaGAACTTGGAGTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCNCRGF*NLEWEP
Trigger: AGGTTCCCACTCCAAGTTTCAGAAACCTCGACAATT...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGCTCCATCTTTTTCTTTaGAGCTACAGCAAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGLHLFL*SYSKRP
Trigger: CGGGCGCTTGCTGTAGCTTCAAAGAAAAAGATGGAG...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATAGCATGCAGAGCGACTaGGTGACGACCACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDSMQSD*VTTTAL
Trigger: CAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCT...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTTCTTTGATACTAGCTaGCTCAAAACCATGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEFFDTS*LKTMAF
Trigger: GAACGCCATGGTTTTGAGGCAGCTAGTATCAAAGAA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGAGTACGTTCATCTTTTaGTTGACGAACAGCACGAGA +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLESTFIF*LTNSTR
Trigger: TCTCGTGCTGTTCGTCAAGCAAAAGATGAACGTACT...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGAGATGGCAGAGCTTCTaGGCAACTGTATTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPRWQSF*ATVFSG
Trigger: GCCAGAAAATACAGTTGCGCAGAAGCTCTGCCATCT...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTGCCAATGCTTCTACTaGAAAATCTGCCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCCQCFY*KICLFF
Trigger: AAAGAACAGGCAGATTTTGCAGTAGAAGCATTGGCA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTATAGTCCACCTTCCCTaGATAATGTATAATGCAAAA +
Preference number: 4 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTIVHLP*IMYNAK
Trigger: TTTTGCATTATACATTATGCAGGGAAGGTGGACTAT...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTTTAAGGCACTTAGTTaGTGCTGCTTCTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEFKALS*CCFLAK
Trigger: CTTTGCCAAGAAGCAGCAGCAACTAAGTGCCTTAAA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTAGGAATCCCGTAGCTTaGCAATTTCCGAAATCTGCA +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCRNPVA*QFPKSA
Trigger: TGCAGATTTCGGAAATTGGCAAGCTACGGGATTCCT...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTGGTATGTTTCAATGTTaGCCCCAACGATATAGCCAG +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCGMFQC*PQRYSQ
Trigger: CTGGCTATATCGTTGGGGCCAACATTGAAACATACC...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTTCATCCCAAGAAGATaGCAGAGCTTCTGCGCAACT +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPFIPRR*QSFCAT
Trigger: AGTTGCGCAGAAGCTCTGCCATCTTCTTGGGATGAA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTATGCTCCCTGACGTTTaGTCCTATCCAGAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCMLPDV*SYPELY
Trigger: ATAAAGCTCTGGATAGGACCAAACGTCAGGGAGCAT...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTATGAACTTGGAATTTTaGTCCTCGAGAAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCMNLEF*SSRSRI
Trigger: GATTCTGCTTCTCGAGGACCAAAATTCCAAGTTCAT...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGCCAGTGACAGGGCTTTaGTTTCTTTCTCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGPVTGL*FLSLWP
Trigger: AGGCCAGAGAGAAAGAAACCAAAGCCCTGTCACTGG...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGATCTGCTCTTTATACTaGTCCGCGTGTCGACGCTCA +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGICSLY*SACRRS
Trigger: TGAGCGTCGACACGCGGACCAGTATAAAGAGCAGAT...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACTCTGCTTCCTCCAGCTaGCGTTTAAGCTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDSASSS*RLSCFI
Trigger: GATGAAGCAGCTTAAACGCCAGCTGGAGGAAGCAGA...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGCGTTCATCTTTTGCTTaGCGAACAGCACGAGACTTT +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPRSSFA*RTARDF
Trigger: AAAGTCTCGTGCTGTTCGTCAAGCAAAAGATGAACG...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACATGAAAGATGCTCCCTaGCGTTTGGTCCTATCCAGA +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDMKDAP*RLVLSR
Trigger: TCTGGATAGGACCAAACGTCAGGGAGCATCTTTCAT...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTCTGTAATACCACTTTaGCTAGAGAGGTACATGATA +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCSVIPL*LERYMI
Trigger: TATCATGTACCTCTCTAGTCAAAGTGGTATTACAGA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGTCGAGTCCAGTTCTCTaGGCCATTGTAAATGGAACG +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGSSPVL*AIVNGT
Trigger: CGTTCCATTTACAATGGCGCAGAGAACTGGACTCGA...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGGATTCCAATGAAAGATaGTCCCTGACGTTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPDSNER*SLTFGP
Trigger: AGGACCAAACGTCAGGGAGCATCTTTCATTGGAATC...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGCAACGGTACGAAACATaGCCTTCTTGGTTTTATATG +
Preference number: 4 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEQRYET*PSWFYM
Trigger: CATATAAAACCAAGAAGGGCATGTTTCGTACCGTTG...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGTTCTCTTCTAAAAGCTaGTGGTGCTTCCGCTCCATC +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGFSSKS*WCFRSI
Trigger: GATGGAGCGGAAGCACCAGCAGCTTTTAGAAGAGAA...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATTCCAGCTGCAGCTTTTaGCGAGCCCCTTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDSSCSF*RAPSSS
Trigger: CGAGGAGGAAGGGGCTCGGCAAAAGCTGCAGCTGGA...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACCTCAAGTCCCTTTTCTaGTTTTCGGCCTTGTTCCGT +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDLKSLF*FSALFR
Trigger: ACGGAACAAGGCCGAAAAGCAGAAAAGGGACTTGAG...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATGAAGCTCCTTCAAGGTaGAGCTGGCGCCGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDEAPSR*SWRRPD
Trigger: ATCTGGCCGGCGCCAGCTGCACCTTGAAGGAGCTTC...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGTTCATCCCAAGAAGATaGCAGAGCTTCTGCGCAACT +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGFIPRR*QSFCAT
Trigger: AGTTGCGCAGAAGCTCTGCCATCTTCTTGGGATGAA...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGATGCTCCCTGACGTTTaGTCCTATCCAGAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPMLPDV*SYPELY
Trigger: ATAAAGCTCTGGATAGGACCAAACGTCAGGGAGCAT...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATTTGGCATGGAGCTCCTaGACCTGCGCGTCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDLAWSS*TCASSF
Trigger: GAAGCTCGACGCGCAGGTCCAGGAGCTCCATGCCAA...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACCGTTCATCTTTTGCTTaGCGAACAGCACGAGACTTT +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDRSSFA*RTARDF
Trigger: AAAGTCTCGTGCTGTTCGTCAAGCAAAAGATGAACG...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGAATTGTCGAGGTTTCTaGAACTTGGAGTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGNCRGF*NLEWEP
Trigger: AGGTTCCCACTCCAAGTTTCAGAAACCTCGACAATT...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGTGTGTATCCTGTAGTTaGGACTCAAGACTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGCVSCS*DSRLAA
Trigger: TGCAGCTAGTCTTGAGTCTCAACTACAGGATACACA...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGCATCCTCAACCTGCATaGAGATTTCTTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPHPQPA*RFLSAS
Trigger: AGAAGCTGAAAGAAATCTTCATGCAGGTTGAGGATG...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTGAGAGGTACATGATATaGAGCACAGTCAAAACTGAA +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCERYMI*STVKTE
Trigger: TTCAGTTTTGACTGTGCTTCATATCATGTACCTCTC...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTATCTCTTCTAATTCCTaGTTTTTAGCAGCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCISSNS*FLAASL
Trigger: AAGACTTGCTGCTAAAAAGCAGGAATTAGAAGAGAT...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGTTCTTCTCTTCATTCTaGTCATCCCTGGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGFFSSF*SSLVCR
Trigger: CCTGCAAACCAGGGATGAGCAGAATGAAGAGAAGAA...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACTCAGCTTCTTCTCAGTaGGACGGACTAATTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDSASSQ*DGLICW
Trigger: CCAACAAATTAGTCCGTCGCACTGAGAAGAAGCTGA...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATACCCCAAATGGGTGTTaGTTCCGATCCAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDTPNGC*FRSSPP
Trigger: GGGTGGGCTGGATCGGAAGCAACACCCATTTGGGGT...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACGAGGTTTCTGAAACTTaGAGTGGGAACCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDEVSET*SGNLAL
Trigger: AAGAGCAAGGTTCCCACTCCAAGTTTCAGAAACCTC...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTCTTCTGCTAACAGCTaGTCAAACTTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPSSANS*SNFFCF
Trigger: GAAGCAGAAGAAGTTTGACCAGCTGTTAGCAGAAGA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATGCATCTTCCGTGGCCTaGAGTTCGTCTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDASSVA*SSSSSS
Trigger: GGAGCTGGAAGACGAACTCCAGGCCACGGAAGATGC...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACCTCATGTCCTGGATTTaGGCTTCATGGTTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDLMSWI*ASWFLV
Trigger: AACTAAGAACCATGAAGCTCAAATCCAGGACATGAG...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTCTGATTCATTGTCACTaGATGTCTGTAATACCACTT +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCLIHCH*MSVIPL
Trigger: AAGTGGTATTACAGACATTCAGTGACAATGAATCAG...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACCACGATCTTGAAGCATaGATCTGTAAGCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDHDLEA*ICKQIQ
Trigger: CTGAATCTGCTTACAGATGCATGCTTCAAGATCGTG...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACTTCCAGAATTGGATTTaGTTGCAAAAGCTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDFQNWI*LQKLPF
Trigger: GAACGGCAGCTTTTGCAAGCAAATCCAATTCTGGAA...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATAGGTCGATGCATGGCTaGAGATCCAGCCCGAAATCG +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDRSMHG*RSSPKS
Trigger: CGATTTCGGGCTGGATCTGCAGCCATGCATCGACCT...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATGACTCAGCCTTGACCTaGTGCAGGACCTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDDSALT*CRTFTS
Trigger: TGAGGTGAAGGTCCTGCAGCAGGTCAAGGCTGAGTC...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATGCTGCCGGATCCGACTaGTCAGGTTTAGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDAAGSD*SGLVSG
Trigger: GCCAGAAACTAAACCTGAGCAGTCGGATCCGGCAGC...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATTCTGACTGGGGTGGCTaGGTCTCGTTGACATCACTG +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDSDWGG*VSLTSL
Trigger: CAGTGATGTCAACGAGACGCAGCCACCCCAGTCAGA...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACAATGAGAGAGACAAGTaGAGTTTAGAGTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDNERDK*SLESTV
Trigger: CACTGTGGACTCTAAACTGCACTTGTCTCTCTCATT...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATCCACTATCCCTTCTATaGACAGACCAGCCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDPLSLL*TDQPSP
Trigger: TGGCGAGGGCTGGTCTGTGCATAGAAGGGATAGTGG...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGGCTTCCATGGTCTCCTaGAAATTATCTTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGASMVS*KLSLSC
Trigger: GCAAGACAAAGATAATTTCCAGGAGACCATGGAAGC...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTCCTCTTCTCGTGATTTaGAATGATACAACGAACAAA +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCPLLVI*NDTTNK
Trigger: TTTGTTCGTTGTATCATTCCAAATCACGAGAAGAGG...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATTTCGCAGCCTCGATTTaGGCTTCGAGGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDFAASI*ASRSFR
Trigger: CCTGAAGGACCTCGAAGCCCAAATCGAGGCTGCGAA...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATAGTCTACATGATCCATaGCTGCCACCTGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDSLHDP*LPPGAS
Trigger: TGAGGCCCCAGGTGGCAGCCATGGATCATGTAGACT...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTACTACTTTAAGCATTaGCAGAATCTCTTCATGGGA +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPYYFKH*QNLFMG
Trigger: TCCCATGAAGAGATTCTGTCAATGCTTAAAGTAGTA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTCTCATATCTCTGTCTaGATTCCTGGAAAACTATTC +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPSHISV*IPGKLF
Trigger: GAATAGTTTTCCAGGAATTCAGACAGAGATATGAGA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATGGTTACCTGTCTGTATaGCAGAGAGCATGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDGYLSV*QRACRA
Trigger: CGCTCTGCATGCTCTCTGTCATACAGACAGGTAACC...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATATCTGGAAGTCTACATaGTCCATGGCTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDIWKST*SMAATW
Trigger: CCAGGTGGCAGCCATGGATCATGTAGACTTCCAGAT...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACGAGAGGTACATGATATaGAGCACAGTCAAAACTGAA +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDERYMI*STVKTE
Trigger: TTCAGTTTTGACTGTGCTTCATATCATGTACCTCTC...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGTTTCTTTCCATTCTCTaGCAACTCCACCATAACTTC +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGFLSIL*QLHHNF
Trigger: GAAGTTATGGTGGAGTTGGCAGAGAATGGAAAGAAA...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACCAACGGTACGAAACATaGCCTTCTTGGTTTTATATG +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDQRYET*PSWFYM
Trigger: CATATAAAACCAAGAAGGGCATGTTTCGTACCGTTG...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATCTCCTCCAGGGCTGTTaGGTGTCTTTGTCTCATGTC +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDLLQGC*VSLSHV
Trigger: GACATGAGACAAAGACACGCAACAGCCCTGGAGGAG...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTAGACTCAAGACTAGCTaGATCCTTAGCAAATTTAAT +
Preference number: 4 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCRLKTS*ILSKFN
Trigger: ATTAAATTTGCTAAGGATGCAGCTAGTCTTGAGTCT...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACTGTGCATTGCTTCCATaGTCTCCTGGAAATTATCTT +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDCALLP*SPGNYL
Trigger: AAGATAATTTCCAGGAGACCATGGAAGCAATGCACA...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACTCAGAAGCTTCTTCTTaGCTTCTTCCAGACTTTCAA +
Preference number: 4 (lower is better)
Translates to: VNIQEDGICSGGSINLIDSEASS*LLPDFQ
Trigger: TTGAAAGTCTGGAAGAAGCCAAGAAGAAGCTTCTGA...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATCGGTCAGGTGTCTGGTaGTCAACAGCCAGTACAGTT +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDRSGVW*STASTV
Trigger: AACTGTACTGGCTGTTGACCACCAGACACCTGACCG...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATTTCGGCCTTGTTCCGTaGAGCCTTCTCGGATTCAAA +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDFGLVP*SLLGFK
Trigger: TTTGAATCCGAGAAGGCTTCACGGAACAAGGCCGAA...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGTCTGTAATACCACTTTaGCTAGAGAGGTACATGATA +
Preference number: 4 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGSVIPL*LERYMI
Trigger: TATCATGTACCTCTCTAGTCAAAGTGGTATTACAGA...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATGGTGTTTCGGAGAGTTaGCATCAGCTTGGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDGVSES*HQLGER
Trigger: TCTCTCACCAAGCTGATGGCAACTCTCCGAAACACC...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGATCTCTTCTAATTCCTaGTTTTTAGCAGCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPISSNS*FLAASL
Trigger: AAGACTTGCTGCTAAAAAGCAGGAATTAGAAGAGAT...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATCATTCTGCTCATCCCTaGTTTGCAGGTCTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDHSAHP*FAGLSR
Trigger: TCGAGAGAGACCTGCAAACCAGGGATGAGCAGAATG...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATCCAGCCCTCTTCTCGTaGTTTGGAATGATACAACGA +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDPALFS*FGMIQR
Trigger: TCGTTGTATCATTCCAAATCACGAGAAGAGGGCTGG...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATGAGAAGCCCATTATGTaGATTGCTTCCATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDEKPIM*IASMVS
Trigger: GGAGACCATGGAAGCAATGCACATAATGGGCTTCTC...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATCTGTATTGCCTCCTCTaGCTTCCTGCAACTTTACTC +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDLYCLL*LPATLL
Trigger: GAGTAAAGTTGCAGGAAGCCAGAGGAGGCAATACAG...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATGGTATGTTTCAATGTTaGCCCCAACGATATAGCCAG +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDGMFQC*PQRYSQ
Trigger: CTGGCTATATCGTTGGGGCCAACATTGAAACATACC...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATGAGGTTTCTGAAACTTaGAGTGGGAACCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDEVSET*SGNLAL
Trigger: AAGAGCAAGGTTCCCACTCCAAGTTTCAGAAACCTC...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATTTGCCATCAGCTTGGTaGGAGATTCTTTGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDLPSAW*EILCRV
Trigger: AACTCTACAAAGAATCTCTCACCAAGCTGATGGCAA...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATAGTACGTTCATCTTTTaGTTGACGAACAGCACGAGA +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDSTFIF*LTNSTR
Trigger: TCTCGTGCTGTTCGTCAAGCAAAAGATGAACGTACT...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATGCTTCCATGGTCTCCTaGAAATTATCTTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDASMVS*KLSLSC
Trigger: GCAAGACAAAGATAATTTCCAGGAGACCATGGAAGC...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATCTTCTTCCAGAAGGGTaGAGACATTATCTAGCTCAT +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDLLPEG*RHYLAH
Trigger: ATGAGCTAGATAATGTCTCCACCCTTCTGGAAGAAG...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATAGGGCATTGTTCTTATaGAGTGTTTCATCATCACCT +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDRALFL*SVSSSP
Trigger: AGGTGATGATGAAACACTCCATAAGAACAATGCCCT...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
3UTR CAA 72 bp ACTGATTCATTGTCACTGAATGTCTGTAATACCACTTaGACTAGAGAGGTACATGATATGAAGCACAGTCAA +
Preference number: 4 (lower is better)
Translates to: TDSLSLNVCNTT*TREVHDMKHSQ
Trigger: TTGACTGTGCTTCATATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATCAGT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATTACTACTTTAAGCATTaGCAGAATCTCTTCATGGGA +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDYYFKH*QNLFMG
Trigger: TCCCATGAAGAGATTCTGTCAATGCTTAAAGTAGTA...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR TCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATTCTCATATCTCTGTCTaGATTCCTGGAAAACTATTC +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDSHISV*IPGKLF
Trigger: GAATAGTTTTCCAGGAATTCAGACAGAGATATGAGA...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR GCA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATAGACTCAAGACTAGCTaGATCCTTAGCAAATTTAAT +
Preference number: 4 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDRLKTS*ILSKFN
Trigger: ATTAAATTTGCTAAGGATGCAGCTAGTCTTGAGTCT...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGGCGGCTGCTCGTTCCTaGGCTTCCTGCTCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: KVSMRARLAMGRGLPPARAAARS*ASCSSC
Trigger: GCAGCTTGAGCAGGAAGCCAAGGAACGAGCAGCCGC...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCCGGCTCAGGCCCTCGTaGGCCTCGGTGGCATCATCC +
Preference number: 5 (lower is better)
Translates to: ERLSDDHGAAPITQRPATRLRPS*ASVASS
Trigger: GGATGATGCCACCGAGGCCAACGAGGGCCTGAGCCG...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGAGCTCCCGCACCTGTTaGATCAGCAGCCGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: KVSMRARLAMGRGLPPARSSRTC*ISSRFF
Trigger: GAAGAAGCGGCTGCTGATCAAACAGGTGCGGGAGCT...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGCTGCTCATCCCTGGTTaGCAGGTCTCTCTCGAACTG +
Preference number: 5 (lower is better)
Translates to: KVSMRARLAMGRGLPPARLLIPG*QVSLEL
Trigger: CAGTTCGAGAGAGACCTGCAAACCAGGGATGAGCAG...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGACCTCATCCCGAGCTTaGTTCGCAGCCTCGATTTGG +
Preference number: 5 (lower is better)
Translates to: KVSMRARLAMGRGLPPARTSSRA*FAASIW
Trigger: CCAAATCGAGGCTGCGAACAAAGCTCGGGATGAGGT...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACAGTTGCTGGCGTGCATaGTCACTCTTCTGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYSCWRA*SLFWAA
Trigger: CGCCGCCCAGAAGAGTGACAATGCACGCCAGCAACT...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGCGACGGACTAATTTGTaGGCGGCTGCTCGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: KVSMRARLAMGRGLPPARRRTNL*AAARSL
Trigger: CAAGGAACGAGCAGCCGCCAACAAATTAGTCCGTCG...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTCACACGCCAGCTCCTaGTTATCTGTCTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: ERLSDDHGAAPITQRPATSHASS*LSVSRP
Trigger: GGGCCTGGAGACAGATAACAAGGAGCTGGCGTGTGA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACTTACGCCGAGATGCGTaGGCACGCGTCGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYLRRDA*ARVASS
Trigger: AGAAGAAGCGACGCGTGCCAACGCATCTCGGCGTAA...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACCGGCTCAGGCCCTCGTaGGCCTCGGTGGCATCATCC +
Preference number: 5 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHRLRPS*ASVASS
Trigger: GGATGATGCCACCGAGGCCAACGAGGGCCTGAGCCG...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CCA 90 bp TCCGCCAGCTCCACCCTGAGCCTGTCGCCTTCAGAGACCTTGGCATaGAGCTCCTGGACCTGCGCGTCGAGCTTCTTCCTCTTGTGCTCA +
Preference number: 5 (lower is better)
Translates to: SASSTLSLSPSETLA*SSWTCASSFFLLCS
Trigger: TGAGCACAAGAGGAAGAAGCTCGACGCGCAGGTCCAGGAGCTCCATGCCAAGGTCTCTGAAGGCGACAGGCTCAGGGTGGAGCTGGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CCA 90 bp CGGCTCAGGCCCTCGTTGGCCTCGGTGGCATCATCCAGTTCCCGCTaGAGTTTACGCCGAGATGCGTTGGCACGCGTCGCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: RLRPSLASVASSSSR*SLRRDALARVASSS
Trigger: AGAAGAAGAAGCGACGCGTGCCAACGCATCTCGGCGTAAACTCCAGCGGGAACTGGATGATGCCACCGAGGCCAACGAGGGCCTGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCACCTCATCCCGAGCTTaGTTCGCAGCCTCGATTTGG +
Preference number: 5 (lower is better)
Translates to: ERLSDDHGAAPITQRPATTSSRA*FAASIW
Trigger: CCAAATCGAGGCTGCGAACAAAGCTCGGGATGAGGT...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTTGCCAGAGGCGCTGTaGGTGATCTCGTCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITLPEAL*VISSAS
Trigger: GCTGGCGGACGAGATCACCAACAGCGCCTCTGGCAA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGCGGCTGCTCGTTCCTaGGCTTCCTGCTCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDAAARS*ASCSSC
Trigger: GCAGCTTGAGCAGGAAGCCAAGGAACGAGCAGCCGC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTTTGCTTTGAACCGCTaGGCCTGTTCCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ERLSDDHGAAPITQRPATFALNR*ACSSCS
Trigger: AGAGCAGCTGGAACAGGCCAAGCGGTTCAAAGCAAA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCTCTCAAACTCCTCCTaGGCCTCCAGGGCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITLSNSS*ASRASS
Trigger: CGAGGAAGCCCTGGAGGCCAAGGAGGAGTTTGAGAG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTACCTCCAGACGAAGCTaGGCATCTTCCGTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFTSRRS*ASSVAW
Trigger: CCAGGCCACGGAAGATGCCAAGCTTCGTCTGGAGGT...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGTTGCCAGAGGCGCTGTaGGTGATCTCGTCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLLPEAL*VISSAS
Trigger: GCTGGCGGACGAGATCACCAACAGCGCCTCTGGCAA...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCAGTTGCTGGCGTGCATaGTCACTCTTCTGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITSCWRA*SLFWAA
Trigger: CGCCGCCCAGAAGAGTGACAATGCACGCCAGCAACT...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTCCAGCTGCCCAATCTaGGCCTCCAGGGCTGAGATG +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFSSCPI*ASRAEM
Trigger: CATCTCAGCCCTGGAGGCCAAGATTGGGCAGCTGGA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS TCA 90 bp CAGCTCATCTCTCTCCTGCTCGGCGTGTCGGCGGGCTCGCTCAGATaGGGCAAGTTCCTAAGCAGTGGAGACTGCGTTAAGCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QLISLLLGVSAGSLR*GKFLSSGDCVKLWL
Trigger: CAGCCAGAGCTTAACGCAGTCTCCACTGCTTAGGAACTTGCCTCATCTGAGCGAGCCCGCCGACACGCCGAGCAGGAGAGAGATGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476737.1
CDS-3UTR CAA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCGCCATATCCTCCACCTaGGAAAACTTAGGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: ERLSDDHGAAPITQRPATAISST*ENLGGF
Trigger: GAACCCACCTAAGTTTTCCAAGGTGGAGGATATGGC...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACAGTCATACCAGTGACTaGATCCAGACCCACGATACG +
Preference number: 5 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYSHTSD*IQTHDT
Trigger: CGTATCGTGGGTCTGGATCAAGTCACTGGTATGACT...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACGGCTGTTGCGTGTCTTaGTCTCATGTCCTGGATTTG +
Preference number: 5 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYGCCVS*SHVLDL
Trigger: CAAATCCAGGACATGAGACAAAGACACGCAACAGCC...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTCGCCTTCAGAGACCTaGGCATGGAGCTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHSPSET*AWSSWT
Trigger: GGTCCAGGAGCTCCATGCCAAGGTCTCTGAAGGCGA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp AAGGTCAGCATGAGGGCCCGGCTGGCGATGGGGAGGGGCCTTCCACCAGCTCGGTCATCTACTTTCTTCTaGGTATCAGCCAACTGGGAC +
Preference number: 5 (lower is better)
Translates to: KVSMRARLAMGRGLPPARSSTFF*VSANWD
Trigger: GTCCCAGTTGGCTGATACCAAGAAGAAAGTAGATGA...CCGAGCTGGTGGAAGGCCCCTCCCCATCGCCAGCCGGGCCCTCATGCTGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTTGGTCTTCTCCAGTTaGTCATACGCCAGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: ERLSDDHGAAPITQRPATLVFSS*SYASAF
Trigger: GAAGGCACTGGCGTATGACAAACTGGAGAAGACCAA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGTTCGCAGCCTCGATTaGGGCTTCGAGGTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDVRSLD*GFEVLQ
Trigger: CTGAAGGACCTCGAAGCCCAAATCGAGGCTGCGAAC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTTGCCAGAGGCGCTGTaGGTGATCTCGTCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTLPEAL*VISSAS
Trigger: GCTGGCGGACGAGATCACCAACAGCGCCTCTGGCAA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGTTCTGCCGCTCCAGTaGCTGGCGTGCATTGTCACT +
Preference number: 5 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDVLPLQ*LACIVT
Trigger: AGTGACAATGCACGCCAGCAACTGGAGCGGCAGAAC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACGCTGAGATGGTGGCCTaGAACTTAGACTTGACAGCA +
Preference number: 5 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYAEMVA*NLDLTA
Trigger: TGCTGTCAAGTCTAAGTTCAAGGCCACCATCTCAGC...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTTACGCCGAGATGCGTaGGCACGCGTCGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFLRRDA*ARVASS
Trigger: AGAAGAAGCGACGCGTGCCAACGCATCTCGGCGTAA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTTACGCCGAGATGCGTaGGCACGCGTCGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDLRRDA*ARVASS
Trigger: AGAAGAAGCGACGCGTGCCAACGCATCTCGGCGTAA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACACGATCCAAAAGCAATaGCCTCTTCAGCCGAAGATG +
Preference number: 5 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYTIQKQ*PLQPKM
Trigger: CATCTTCGGCTGAAGAGGCAATTGCTTTTGGATCGT...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTCCATCTTCTTGATCTaGGCCTCTGCTGTCACCTTT +
Preference number: 5 (lower is better)
Translates to: ERLSDDHGAAPITQRPATSIFLI*ASAVTF
Trigger: AAAGGTGACAGCAGAGGCCAAGATCAAGAAGATGGA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTGCTCCTCCAGGGCTGTaGCGTGTCTTTGTCTCATGT +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFAPPGL*RVFVSC
Trigger: ACATGAGACAAAGACACGCAACAGCCCTGGAGGAGC...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCGCCAGTGACAGGGCTTaGGTTTCTTTCTCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITASDRA*VSFSLA
Trigger: GGCCAGAGAGAAAGAAACCAAAGCCCTGTCACTGGC...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTCTGCTCGGAGCTGCTaGTTCTGCCTCTCAAACTCC +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFSARSC*FCLSNS
Trigger: GGAGTTTGAGAGGCAGAACAAGCAGCTCCGAGCAGA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACAGCTCCCGCACCTGTTaGATCAGCAGCCGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHSSRTC*ISSRFF
Trigger: GAAGAAGCGGCTGCTGATCAAACAGGTGCGGGAGCT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGACCTGTAGAGTGGTCTaGCGGAAGCGGTCGTTGAGC +
Preference number: 5 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLTCRVV*RKRSLS
Trigger: GCTCAACGACCGCTTCCGCAAGACCACTCTACAGGT...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACACCTGTAGAGTGGTCTaGCGGAAGCGGTCGTTGAGC +
Preference number: 5 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHTCRVV*RKRSLS
Trigger: GCTCAACGACCGCTTCCGCAAGACCACTCTACAGGT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTCCAGCTGCCCAATCTaGGCCTCCAGGGCTGAGATG +
Preference number: 5 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTSSCPI*ASRAEM
Trigger: CATCTCAGCCCTGGAGGCCAAGATTGGGCAGCTGGA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCGACGGACTAATTTGTaGGCGGCTGCTCGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFRRTNL*AAARSL
Trigger: CAAGGAACGAGCAGCCGCCAACAAATTAGTCCGTCG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACGTGCGACGGACTAATTaGTTGGCGGCTGCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHVRRTN*LAAARS
Trigger: GGAACGAGCAGCCGCCAACAAATTAGTCCGTCGCAC...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGCGGCTCAGGCCCTCGTaGGCCTCGGTGGCATCATCC +
Preference number: 5 (lower is better)
Translates to: GVTPTGMSTFRKMASVLERLRPS*ASVASS
Trigger: GGATGATGCCACCGAGGCCAACGAGGGCCTGAGCCG...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTGAGGAGGGCGCCGGCAGAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACAAGGAATCCCGTAGCTaGCCAATTTCCGAAATCTGC +
Preference number: 5 (lower is better)
Translates to: VRRAPAEPGGSGDHLEVYKESRS*PISEIC
Trigger: GCAGATTTCGGAAATTGGCAAGCTACGGGATTCCTT...GTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTCTGCCGGCGCCCTCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAGTGGTCTAGGAGACTaGATGTGGCTGAGGAGTCGG +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFSGLGD*MWLRSR
Trigger: CCGACTCCTCAGCCACATCAAGTCTCCTAGACCACT...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGAACCCCAAATGGGTGTaGCTTCCGATCCAGCCCACC +
Preference number: 5 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLNPKWV*LPIQPT
Trigger: GGTGGGCTGGATCGGAAGCAACACCCATTTGGGGTT...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACAACCCCAAATGGGTGTaGCTTCCGATCCAGCCCACC +
Preference number: 5 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHNPKWV*LPIQPT
Trigger: GGTGGGCTGGATCGGAAGCAACACCCATTTGGGGTT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAGCAGCGGCTGAATTaGCAAGGTCAGCATGAGGGC +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFKQRLN*QGQHEG
Trigger: GCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTT...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCACCTCATTGACAAACTaGGAACAAGCCTCGGACACA +
Preference number: 5 (lower is better)
Translates to: ERLSDDHGAAPITQRPATTSLTN*EQASDT
Trigger: TGTGTCCGAGGCTTGTTCCAAGTTTGTCAATGAGGT...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CCA 90 bp CGAGATGCGTTGGCACGCGTCGCTTCTTCTTCTGCTTCCTCCAGCTaGCGTTTAAGCTGCTTCATCCGAGCGTTGGCCTTCTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: RDALARVASSSASSS*RLSCFIRALAFSIC
Trigger: GCAGATGGAGAAGGCCAACGCTCGGATGAAGCAGCTTAAACGCCAGCTGGAGGAAGCAGAAGAAGAAGCGACGCGTGCCAACGCATCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCACGTTCATCTTTTGCTaGACGAACAGCACGAGACTT +
Preference number: 5 (lower is better)
Translates to: ERLSDDHGAAPITQRPATTFIFC*TNSTRL
Trigger: AAGTCTCGTGCTGTTCGTCAAGCAAAAGATGAACGT...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTTCTGCTTTTCGGCCTaGTTCCGTGAAGCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDFCFSA*FREAFS
Trigger: CGAGAAGGCTTCACGGAACAAGGCCGAAAAGCAGAA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTTCTGCTTTTCGGCCTaGTTCCGTGAAGCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITFCFSA*FREAFS
Trigger: CGAGAAGGCTTCACGGAACAAGGCCGAAAAGCAGAA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTTTGCTTTGAACCGCTaGGCCTGTTCCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITFALNR*ACSSCS
Trigger: AGAGCAGCTGGAACAGGCCAAGCGGTTCAAAGCAAA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTCGCCTTCAGAGACCTaGGCATGGAGCTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCSPSET*AWSSWT
Trigger: GGTCCAGGAGCTCCATGCCAAGGTCTCTGAAGGCGA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCATTCTGCAGCTTACTaGCTTTCTCCGCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFHSAAY*LSPPAP
Trigger: TGGAGCTGGCGGAGAAAGCAAGTAAGCTGCAGAATG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTCATCTACTTTCTTCTaGGTATCAGCCAACTGGGAC +
Preference number: 5 (lower is better)
Translates to: ERLSDDHGAAPITQRPATSSTFF*VSANWD
Trigger: GTCCCAGTTGGCTGATACCAAGAAGAAAGTAGATGA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCCTTCCAGACTTTCAATaGTTCCCAGGTCGTCATCTA +
Preference number: 5 (lower is better)
Translates to: ERLSDDHGAAPITQRPATLPDFQ*FPGRHL
Trigger: TAGATGACGACCTGGGAACAATTGAAAGTCTGGAAG...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCACCTCCAGACGAAGCTaGGCATCTTCCGTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCTSRRS*ASSVAW
Trigger: CCAGGCCACGGAAGATGCCAAGCTTCGTCTGGAGGT...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTCCAGCAGCGCGGACTaGCCAGAGGCGCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GVTPTGMSTFRKMASVLESSSAD*PEALLV
Trigger: CACCAACAGCGCCTCTGGCAAGTCCGCGCTGCTGGA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTTGCGGAAGCGGTCGTaGAGCAGCTCCATGTTGCTC +
Preference number: 5 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTLRKRS*SSSMLL
Trigger: GAGCAACATGGAGCTGCTCAACGACCGCTTCCGCAA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGCCTTGAACTTAGACTaGACAGCACCCTCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDALNLD*TAPSSS
Trigger: GGAACTCGAGGGTGCTGTCAAGTCTAAGTTCAAGGC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCGCCTTGAACTTAGACTaGACAGCACCCTCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITALNLD*TAPSSS
Trigger: GGAACTCGAGGGTGCTGTCAAGTCTAAGTTCAAGGC...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTGCGGCTGCTCGTTCCTaGGCTTCCTGCTCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCAAARS*ASCSSC
Trigger: GCAGCTTGAGCAGGAAGCCAAGGAACGAGCAGCCGC...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCGGTGGCTGCGTCTCGTaGACATCACTGGTCTTACTT +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITGGCVS*TSLVLL
Trigger: AAGTAAGACCAGTGATGTCAACGAGACGCAGCCACC...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACAACTGTCCCACTGTATaGCCTCCTCTGGCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHNCPTV*PPLASC
Trigger: GCAGGAAGCCAGAGGAGGCAATACAGTGGGACAGTT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACAGTGGTCTAGGAGACTaGATGTGGCTGAGGAGTCGG +
Preference number: 5 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHSGLGD*MWLRSR
Trigger: CCGACTCCTCAGCCACATCAAGTCTCCTAGACCACT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTAACCCCAAATGGGTGTaGCTTCCGATCCAGCCCACC +
Preference number: 5 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTNPKWV*LPIQPT
Trigger: GGTGGGCTGGATCGGAAGCAACACCCATTTGGGGTT...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS TCA 90 bp ACTCTCCCAGGGTTTTTGAATGCTCCCGAACATAACAAAGTCTGCTaGAACTCAGCCCCATGGGCTCCCGTGCAGCGCAGCTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: TLPGFLNAPEHNKVC*NSAPWAPVQRSCWA
Trigger: AGCCCAGCAGCTGCGCTGCACGGGAGCCCATGGGGCTGAGTTTCAGCAGACTTTGTTATGTTCGGGAGCATTCAAAAACCCTGGGAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465458.1
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCAGCTGTCCAATCAGCTaGAGTGGCAGGGTTGTAGAT +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITSCPIS*SGRVVD
Trigger: ATCTACAACCCTGCCACTCAAGCTGATTGGACAGCT...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCTGGTCCTCACGATCTaGAAGCATGCATCTGTAAGC +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFLVLTI*KHASVS
Trigger: GCTTACAGATGCATGCTTCAAGATCGTGAGGACCAG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAGATTCTTTGTAGAGTaGCCCAACGGTACGAAACAT +
Preference number: 5 (lower is better)
Translates to: ERLSDDHGAAPITQRPATRFFVE*PNGTKH
Trigger: ATGTTTCGTACCGTTGGGCAACTCTACAAAGAATCT...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCGAACAAAGTTAGGGTaGGTGTTTCGGAGAGTTGCC +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITRTKLG*VFRRVA
Trigger: GGCAACTCTCCGAAACACCAACCCTAACTTTGTTCG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGTCTCCAGGCCCTGCTaGTTCTTCTCTAGATTTGCT +
Preference number: 5 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDVSRPC*FFSRFA
Trigger: AGCAAATCTAGAGAAGAACAAGCAGGGCCTGGAGAC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTCGAGCTTCTTCCTCTaGTGCTCAGACTCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHSSFFL*CSDSAL
Trigger: CAAGGCTGAGTCTGAGCACAAGAGGAAGAAGCTCGA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATGCTGAGATGGTGGCCTaGAACTTAGACTTGACAGCA +
Preference number: 5 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDAEMVA*NLDLTA
Trigger: TGCTGTCAAGTCTAAGTTCAAGGCCACCATCTCAGC...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTGCTGAGATGGTGGCCTaGAACTTAGACTTGACAGCA +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFAEMVA*NLDLTA
Trigger: TGCTGTCAAGTCTAAGTTCAAGGCCACCATCTCAGC...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTACCAATATTCCCATTTaGGGCTCAAAGCAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFTNIPI*GSKQRL
Trigger: CAGCCGCTGCTTTGAGCCCAAAATGGGAATATTGGT...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATACGATCCAAAAGCAATaGCCTCTTCAGCCGAAGATG +
Preference number: 5 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDTIQKQ*PLQPKM
Trigger: CATCTTCGGCTGAAGAGGCAATTGCTTTTGGATCGT...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGGCCATATCCTCCACCTaGGAAAACTTAGGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLAISST*ENLGGF
Trigger: GAACCCACCTAAGTTTTCCAAGGTGGAGGATATGGC...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACGCCATATCCTCCACCTaGGAAAACTTAGGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHAISST*ENLGGF
Trigger: GAACCCACCTAAGTTTTCCAAGGTGGAGGATATGGC...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCTTGGAGTGGGAACCTaGCTCTTGAACCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDLGVGT*LLNQFF
Trigger: GAAAAACTGGTTCAAGAGCAAGGTTCCCACTCCAAG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCTTGGAGTGGGAACCTaGCTCTTGAACCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFLGVGT*LLNQFF
Trigger: GAAAAACTGGTTCAAGAGCAAGGTTCCCACTCCAAG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATCGAAACATGCCCTTCTaGGTTTTATATGCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDRNMPF*VLYAEP
Trigger: TGGCTCCGCATATAAAACCAAGAAGGGCATGTTTCG...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCGCTCTGAAAAATATCTaGCTCTGTCCAATTCTGTAC +
Preference number: 5 (lower is better)
Translates to: ERLSDDHGAAPITQRPATALKNI*LCPILY
Trigger: GTACAGAATTGGACAGAGCAAGATATTTTTCAGAGC...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGCGACCCGCAACCTGCTTATTCCTGATTTaGGCCAAGTTTTTCGCCTTT +
Preference number: 5 (lower is better)
Translates to: ERLSDDHGAAPITQRPATCLFLI*AKFFAF
Trigger: AAAGGCGAAAAACTTGGCCAAAATCAGGAATAAGCA...GGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGGGCTGTTGCGTGTCTTaGTCTCATGTCCTGGATTTG +
Preference number: 5 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLGCCVS*SHVLDL
Trigger: CAAATCCAGGACATGAGACAAAGACACGCAACAGCC...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTCACACGCCAGCTCCTaGTTATCTGTCTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCSHASS*LSVSRP
Trigger: GGGCCTGGAGACAGATAACAAGGAGCTGGCGTGTGA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGTTGGTCTTCTCCAGTTaGTCATACGCCAGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLLVFSS*SYASAF
Trigger: GAAGGCACTGGCGTATGACAAACTGGAGAAGACCAA...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGCTCTCAAACTCCTCCTaGGCCTCCAGGGCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: GVTPTGMSTFRKMASVLELSNSS*ASRASS
Trigger: CGAGGAAGCCCTGGAGGCCAAGGAGGAGTTTGAGAG...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTCTGCTCGGAGCTGCTaGTTCTGCCTCTCAAACTCC +
Preference number: 5 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCSARSC*FCLSNS
Trigger: GGAGTTTGAGAGGCAGAACAAGCAGCTCCGAGCAGA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTGCTCATCCCTGGTTaGCAGGTCTCTCTCGAACTG +
Preference number: 5 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCLLIPG*QVSLEL
Trigger: CAGTTCGAGAGAGACCTGCAAACCAGGGATGAGCAG...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTCCAGCAGCGCGGACTaGCCAGAGGCGCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPSSSAD*PEALLV
Trigger: CACCAACAGCGCCTCTGGCAAGTCCGCGCTGCTGGA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTTGCGGAAGCGGTCGTaGAGCAGCTCCATGTTGCTC +
Preference number: 5 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCLRKRS*SSSMLL
Trigger: GAGCAACATGGAGCTGCTCAACGACCGCTTCCGCAA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTGTGCGACGGACTAATTaGTTGGCGGCTGCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCVRRTN*LAAARS
Trigger: GGAACGAGCAGCCGCCAACAAATTAGTCCGTCGCAC...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTGCTTCATCCGAGCGTaGGCCTTCTCCATCTGCTCT +
Preference number: 5 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCCFIRA*AFSICS
Trigger: AGAGCAGATGGAGAAGGCCAACGCTCGGATGAAGCA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCAAGCAGCGGCTGAATTaGCAAGGTCAGCATGAGGGC +
Preference number: 5 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCKQRLN*QGQHEG
Trigger: GCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTT...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTACCTCATTGACAAACTaGGAACAAGCCTCGGACACA +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFTSLTN*EQASDT
Trigger: TGTGTCCGAGGCTTGTTCCAAGTTTGTCAATGAGGT...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS GCA 90 bp GCTCCTGAAGACTGTTCTTCTCCTCTTCCAGCTGCCGGATCCGACTaGTCAGGTTTAGTTTCTGGCGTGTCTCCTCCTGAAGAAGCTCCT +
Preference number: 5 (lower is better)
Translates to: APEDCSSPLPAAGSD*SGLVSGVSPPEEAP
Trigger: AGGAGCTTCTTCAGGAGGAGACACGCCAGAAACTAAACCTGAGCAGTCGGATCCGGCAGCTGGAAGAGGAGAAGAACAGTCTTCAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
ENST00000488329.1
CDS GCA 90 bp AGCTCCCGCACCTGTTTGATCAGCAGCCGCTTCTTCTCTTCATTCTaGTCATCCCTGGTTTGCAGGTCTCTCTCGAACTGCGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: SSRTCLISSRFFSSF*SSLVCRSLSNCAFM
Trigger: CATGAAGGCGCAGTTCGAGAGAGACCTGCAAACCAGGGATGAGCAGAATGAAGAGAAGAAGCGGCTGCTGATCAAACAGGTGCGGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAGAATTGGATTTGCTaGCAAAAGCTGCCGTTCAAG +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITQNWIC*QKLPFK
Trigger: CTTGAACGGCAGCTTTTGCAAGCAAATCCAATTCTG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACCTTGGAGTGGGAACCTaGCTCTTGAACCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHLGVGT*LLNQFF
Trigger: GAAAAACTGGTTCAAGAGCAAGGTTCCCACTCCAAG...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTCGAACAAAGTTAGGGTaGGTGTTTCGGAGAGTTGCC +
Preference number: 5 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTRTKLG*VFRRVA
Trigger: GGCAACTCTCCGAAACACCAACCCTAACTTTGTTCG...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTTGCGGAAGCGGTCGTaGAGCAGCTCCATGTTGCTC +
Preference number: 5 (lower is better)
Translates to: GVTPTGMSTFRKMASVLELRKRS*SSSMLL
Trigger: GAGCAACATGGAGCTGCTCAACGACCGCTTCCGCAA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGTGCGACGGACTAATTaGTTGGCGGCTGCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEVRRTN*LAAARS
Trigger: GGAACGAGCAGCCGCCAACAAATTAGTCCGTCGCAC...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTGCTTCATCCGAGCGTaGGCCTTCTCCATCTGCTCT +
Preference number: 5 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCCFIRA*AFSICS
Trigger: AGAGCAGATGGAGAAGGCCAACGCTCGGATGAAGCA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGAAGGAATCCCGTAGCTaGCCAATTTCCGAAATCTGC +
Preference number: 5 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLKESRS*PISEIC
Trigger: GCAGATTTCGGAAATTGGCAAGCTACGGGATTCCTT...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTAGTGGTCTAGGAGACTaGATGTGGCTGAGGAGTCGG +
Preference number: 5 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCSGLGD*MWLRSR
Trigger: CCGACTCCTCAGCCACATCAAGTCTCCTAGACCACT...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATAGCCCCTTTCACAGTTaGCTCACTGAAATAGCATTG +
Preference number: 5 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDSPFHS*LTEIAL
Trigger: CAATGCTATTTCAGTGAGCAAACTGTGAAAGGGGCT...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTACCAATATTCCCATTTaGGGCTCAAAGCAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTTNIPI*GSKQRL
Trigger: CAGCCGCTGCTTTGAGCCCAAAATGGGAATATTGGT...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS TCA 90 bp CTGGCTTCCTGCAACTTTACTCTGACTGGGGTGGCTGCGTCTCGTTaGCATCACTGGTCTTACTTTCTGTGTCATCGTCGGAGAGCTCCA +
Preference number: 5 (lower is better)
Translates to: LASCNFTLTGVAASR*HHWSYFLCHRRRAP
Trigger: TGGAGCTCTCCGACGATGACACAGAAAGTAAGACCAGTGATGTCAACGAGACGCAGCCACCCCAGTCAGAGTAAAGTTGCAGGAAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCATTCCAGAATTGGATTaGCTTGCAAAAGCTGCCGTT +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITIPELD*LAKAAV
Trigger: AACGGCAGCTTTTGCAAGCAAATCCAATTCTGGAAT...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCTCCTGGAAATTATCTTaGTCTTGCTGTCCCGGAATA +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITSWKLS*SCCPGI
Trigger: TATTCCGGGACAGCAAGACAAAGATAATTTCCAGGA...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTTCTGGCATGGAAGCTaGATCAGTATTTCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDFWHGS*ISISLL
Trigger: AAGGAGAGAAATACTGATCAAGCTTCCATGCCAGAA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTCAATTCTGTACAAGTTaGGGTCCAATTCTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFQFCTS*GPILKP
Trigger: GGGCTTTAGAATTGGACCCAAACTTGTACAGAATTG...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCGGCTGTTGCGTGTCTTaGTCTCATGTCCTGGATTTG +
Preference number: 5 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCGCCVS*SHVLDL
Trigger: CAAATCCAGGACATGAGACAAAGACACGCAACAGCC...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGTCGCCTTCAGAGACCTaGGCATGGAGCTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPSPSET*AWSSWT
Trigger: GGTCCAGGAGCTCCATGCCAAGGTCTCTGAAGGCGA...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTCATCTACTTTCTTCTaGGTATCAGCCAACTGGGAC +
Preference number: 5 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHSSTFF*VSANWD
Trigger: GTCCCAGTTGGCTGATACCAAGAAGAAAGTAGATGA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTGCTTCATCCGAGCGTaGGCCTTCTCCATCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GVTPTGMSTFRKMASVLECFIRA*AFSICS
Trigger: AGAGCAGATGGAGAAGGCCAACGCTCGGATGAAGCA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCAGCCTTAAGACACAGTaGATCTTTCAGGAAGGAATC +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITSLKTQ*IFQEGI
Trigger: GATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCT...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS GCA 90 bp ACCTTCACCTCACACGCCAGCTCCTTGTTATCTGTCTCCAGGCCCTaGTTGTTCTTCTCTAGATTTGCTTTGAACCGCTTGGCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: TFTSHASSLLSVSRP*LFFSRFALNRLACS
Trigger: GGAACAGGCCAAGCGGTTCAAAGCAAATCTAGAGAAGAACAAGCAGGGCCTGGAGACAGATAACAAGGAGCTGGCGTGTGAGGTGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS GCA 90 bp ATTGCCTCCTCTGGCTTCCTGCAACTTTACTCTGACTGGGGTGGCTaGGTCTCGTTGACATCACTGGTCTTACTTTCTGTGTCATCGTCG +
Preference number: 5 (lower is better)
Translates to: IASSGFLQLYSDWGG*VSLTSLVLLSVSSS
Trigger: CGACGATGACACAGAAAGTAAGACCAGTGATGTCAACGAGACGCAGCCACCCCAGTCAGAGTAAAGTTGCAGGAAGCCAGAGGAGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTAGCTGTCCAATCAGCTaGAGTGGCAGGGTTGTAGAT +
Preference number: 5 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCSCPIS*SGRVVD
Trigger: ATCTACAACCCTGCCACTCAAGCTGATTGGACAGCT...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTCAGAATTGGATTTGCTaGCAAAAGCTGCCGTTCAAG +
Preference number: 5 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTQNWIC*QKLPFK
Trigger: CTTGAACGGCAGCTTTTGCAAGCAAATCCAATTCTG...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGATTCCAGAATTGGATTaGCTTGCAAAAGCTGCCGTT +
Preference number: 5 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLIPELD*LAKAAV
Trigger: AACGGCAGCTTTTGCAAGCAAATCCAATTCTGGAAT...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACTTCTGGCATGGAAGCTaGATCAGTATTTCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHFWHGS*ISISLL
Trigger: AAGGAGAGAAATACTGATCAAGCTTCCATGCCAGAA...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCGAAACATGCCCTTCTaGGTTTTATATGCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCRNMPF*VLYAEP
Trigger: TGGCTCCGCATATAAAACCAAGAAGGGCATGTTTCG...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACCAATTCTGTACAAGTTaGGGTCCAATTCTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHQFCTS*GPILKP
Trigger: GGGCTTTAGAATTGGACCCAAACTTGTACAGAATTG...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTTGCTTATTCCTGATTTaGGCCAAGTTTTTCGCCTTT +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFCLFLI*AKFFAF
Trigger: AAAGGCGAAAAACTTGGCCAAAATCAGGAATAAGCA...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTTGGTCTTCTCCAGTTaGTCATACGCCAGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCLVFSS*SYASAF
Trigger: GAAGGCACTGGCGTATGACAAACTGGAGAAGACCAA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACCTCTCAAACTCCTCCTaGGCCTCCAGGGCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: VNIQEDGICSGGSINLIDLSNSS*ASRASS
Trigger: CGAGGAAGCCCTGGAGGCCAAGGAGGAGTTTGAGAG...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTTCTGCTCGGAGCTGCTaGTTCTGCCTCTCAAACTCC +
Preference number: 5 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCSARSC*FCLSNS
Trigger: GGAGTTTGAGAGGCAGAACAAGCAGCTCCGAGCAGA...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGAGCTCCCGCACCTGTTaGATCAGCAGCCGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPSSRTC*ISSRFF
Trigger: GAAGAAGCGGCTGCTGATCAAACAGGTGCGGGAGCT...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGAGTTGCTGGCGTGCATaGTCACTCTTCTGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGSCWRA*SLFWAA
Trigger: CGCCGCCCAGAAGAGTGACAATGCACGCCAGCAACT...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCCTTGAACTTAGACTaGACAGCACCCTCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEALNLD*TAPSSS
Trigger: GGAACTCGAGGGTGCTGTCAAGTCTAAGTTCAAGGC...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGTCCAGCTGCCCAATCTaGGCCTCCAGGGCTGAGATG +
Preference number: 5 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGSSCPI*ASRAEM
Trigger: CATCTCAGCCCTGGAGGCCAAGATTGGGCAGCTGGA...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CCA 90 bp GGCAGGGTTGTAGATGACAGCCCTGTCCACAAAGAGATACCTCTCTaGATCCTCGAGTCCAGTTCTCTGCGCCATTGTAAATGGAACGAT +
Preference number: 5 (lower is better)
Translates to: GRVVDDSPVHKEIPL*ILESSSLRHCKWND
Trigger: ATCGTTCCATTTACAATGGCGCAGAGAACTGGACTCGAGGATCCAGAGAGGTATCTCTTTGTGGACAGGGCTGTCATCTACAACCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
ENST00000411957.1
CDS CCA 90 bp ATTTGGGCTTGTAGCTCTCGCACAACTTTAAGGGCATTGTTCTTATaGAGTGTTTCATCATCACCTCTGGCCAGTGCGCCCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: IWACSSRTTLRALFL*SVSSSPLASAPCSS
Trigger: GGAGCTGCAGGGCGCACTGGCCAGAGGTGATGATGAAACACTCCATAAGAACAATGCCCTTAAAGTTGTGCGAGAGCTACAAGCCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGCTGGTCCTCACGATCTaGAAGCATGCATCTGTAAGC +
Preference number: 5 (lower is better)
Translates to: GVTPTGMSTFRKMASVLELVLTI*KHASVS
Trigger: GCTTACAGATGCATGCTTCAAGATCGTGAGGACCAG...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCAAATGATTCCAGAATaGGATTTGCTTGCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITQMIPE*DLLAKA
Trigger: AGCTTTTGCAAGCAAATCCAATTCTGGAATCATTTG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GACAGAGAGCATGCAGAGCGACTGAGTGACGACCACGGCGCTGCCCCAATAACCCCAGTTACATCAAAGTaGATCCGAATAAATTTGCCA +
Preference number: 5 (lower is better)
Translates to: DREHAERLSDDHGAAPITPVTSK*IRINLP
Trigger: TGGCAAATTTATTCGGATCAACTTTGATGTAACTGG...GGTTATTGGGGCAGCGCCGTGGTCGTCACTCAGTCGCTCTGCATGCTCTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGAGTCATACCAGTGACTaGATCCAGACCCACGATACG +
Preference number: 5 (lower is better)
Translates to: GVTPTGMSTFRKMASVLESHTSD*IQTHDT
Trigger: CGTATCGTGGGTCTGGATCAAGTCACTGGTATGACT...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CGGCGCTGCCCCAATAACCCAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTACAACTTTAAGGGCATaGTTCTTATGGAGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: RRCPNNPATRNQGPGVCFTTLRA*FLWSVS
Trigger: TGAAACACTCCATAAGAACAATGCCCTTAAAGTTGT...AAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTGGGTTATTGGGGCAGCGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTTTTGCTTTGAACCGCTaGGCCTGTTCCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCFALNR*ACSSCS
Trigger: AGAGCAGCTGGAACAGGCCAAGCGGTTCAAAGCAAA...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGTCACACGCCAGCTCCTaGTTATCTGTCTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGSHASS*LSVSRP
Trigger: GGGCCTGGAGACAGATAACAAGGAGCTGGCGTGTGA...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTTCGAGCTTCTTCCTCTaGTGCTCAGACTCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCSSFFL*CSDSAL
Trigger: CAAGGCTGAGTCTGAGCACAAGAGGAAGAAGCTCGA...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACGTTCGCAGCCTCGATTaGGGCTTCGAGGTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: VNIQEDGICSGGSINLIDVRSLD*GFEVLQ
Trigger: CTGAAGGACCTCGAAGCCCAAATCGAGGCTGCGAAC...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACACCTGTAGAGTGGTCTaGCGGAAGCGGTCGTTGAGC +
Preference number: 5 (lower is better)
Translates to: VNIQEDGICSGGSINLIDTCRVV*RKRSLS
Trigger: GCTCAACGACCGCTTCCGCAAGACCACTCTACAGGT...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACGTTCTGCCGCTCCAGTaGCTGGCGTGCATTGTCACT +
Preference number: 5 (lower is better)
Translates to: VNIQEDGICSGGSINLIDVLPLQ*LACIVT
Trigger: AGTGACAATGCACGCCAGCAACTGGAGCGGCAGAAC...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCAGCCCCTTTCACAGTTaGCTCACTGAAATAGCATTG +
Preference number: 5 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCSPFHS*LTEIAL
Trigger: CAATGCTATTTCAGTGAGCAAACTGTGAAAGGGGCT...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTACCTCATTGACAAACTaGGAACAAGCCTCGGACACA +
Preference number: 5 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCTSLTN*EQASDT
Trigger: TGTGTCCGAGGCTTGTTCCAAGTTTGTCAATGAGGT...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGCTCAAAGCAGCGGCTGAATTTGCAAGGTCAGCATGAGGGCCCGGCTGGCGATTTCCGTAATGTCAGTTaGCTTAACTACCAACCAAAA +
Preference number: 5 (lower is better)
Translates to: GSKQRLNLQGQHEGPAGDFRNVS*LNYQPK
Trigger: TTTTGGTTGGTAGTTAAGCAAACTGACATTACGGAA...ATCGCCAGCCGGGCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTTTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CCA 90 bp ATACCTCTCTGGATCCTCGAGTCCAGTTCTCTGCGCCATTGTAAATaGAACGATCCAAAAGCAATTGCCTCTTCAGCCGAAGATGGTGGC +
Preference number: 5 (lower is better)
Translates to: IPLWILESSSLRHCK*NDPKAIASSAEDGG
Trigger: GCCACCATCTTCGGCTGAAGAGGCAATTGCTTTTGGATCGTTCCATTTACAATGGCGCAGAGAACTGGACTCGAGGATCCAGAGAGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCTCCTGGAAATTATCTTaGTCTTGCTGTCCCGGAATA +
Preference number: 5 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCSWKLS*SCCPGI
Trigger: TATTCCGGGACAGCAAGACAAAGATAATTTCCAGGA...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCTCCTCTGTTTTCTTTGATGAACTaGGAATTTTGGTCCTCGAGA +
Preference number: 5 (lower is better)
Translates to: SAGGPGCIPNCPTVLPPLFSLMN*EFWSSR
Trigger: TCTCGAGGACCAAAATTCCAAGTTCATCAAAGAAAA...CAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTGCTTATTCCTGATTTaGGCCAAGTTTTTCGCCTTT +
Preference number: 5 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTCLFLI*AKFFAF
Trigger: AAAGGCGAAAAACTTGGCCAAAATCAGGAATAAGCA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GAGCCAGGCGGTTCGGGAGACCATCTGGAAGTCTACATGATCCATGGCTGCCACACAACTTTAAGGGCATaGTTCTTATGGAGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: EPGGSGDHLEVYMIHGCHTTLRA*FLWSVS
Trigger: TGAAACACTCCATAAGAACAATGCCCTTAAAGTTGT...GTGGCAGCCATGGATCATGTAGACTTCCAGATGGTCTCCCGAACCGCCTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGGCTCCTCCAGGGCTGTaGCGTGTCTTTGTCTCATGT +
Preference number: 5 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGAPPGL*RVFVSC
Trigger: ACATGAGACAAAGACACGCAACAGCCCTGGAGGAGC...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACCTGCTCATCCCTGGTTaGCAGGTCTCTCTCGAACTG +
Preference number: 5 (lower is better)
Translates to: VNIQEDGICSGGSINLIDLLIPG*QVSLEL
Trigger: CAGTTCGAGAGAGACCTGCAAACCAGGGATGAGCAG...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACACCTCATCCCGAGCTTaGTTCGCAGCCTCGATTTGG +
Preference number: 5 (lower is better)
Translates to: VNIQEDGICSGGSINLIDTSSRA*FAASIW
Trigger: CCAAATCGAGGCTGCGAACAAAGCTCGGGATGAGGT...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGGGTGGCTGCGTCTCGTaGACATCACTGGTCTTACTT +
Preference number: 5 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPGGCVS*TSLVLL
Trigger: AAGTAAGACCAGTGATGTCAACGAGACGCAGCCACC...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGAAGCAGCGGCTGAATTaGCAAGGTCAGCATGAGGGC +
Preference number: 5 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGKQRLN*QGQHEG
Trigger: GCCCTCATGCTGACCTTGCAAATTCAGCCGCTGCTT...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS TCA 90 bp AGCTCCTCCAGGGCTGTTGCGTGTCTTTGTCTCATGTCCTGGATTTaGGCTTCATGGTTCTTAGTTTCCTCCTCAAGAGCTTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SSSRAVACLCLMSWI*ASWFLVSSSRAFFS
Trigger: GCTGAAGAAAGCTCTTGAGGAGGAAACTAAGAACCATGAAGCTCAAATCCAGGACATGAGACAAAGACACGCAACAGCCCTGGAGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS TCA 90 bp TCTTGGTTTTATATGCGGAGCCAAAAGCTGTCTCAGTCATACCAGTaGCTTGATCCAGACCCACGATACGGTCCACTGGTGGCTCATGAA +
Preference number: 5 (lower is better)
Translates to: SWFYMRSQKLSQSYQ*LDPDPRYGPLVAHE
Trigger: TTCATGAGCCACCAGTGGACCGTATCGTGGGTCTGGATCAAGTCACTGGTATGACTGAGACAGCTTTTGGCTCCGCATATAAAACCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360416.8
CDS GCA 90 bp GACAGGAGATGCCATATAGGTAAGGCAGTCAGCATACTTAGGCACTaGACAAGCCGGGAACTAACAGCCACACACTTATATGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: DRRCHIGKAVSILRH*TSRELTATHLYGRI
Trigger: TATCCTGCCATATAAGTGTGTGGCTGTTAGTTCCCGGCTTGTGCAGTGCCTAAGTATGCTGACTGCCTTACCTATATGGCATCTCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469865.1
CDS-3UTR CAA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGCTGGTCCTCACGATCTaGAAGCATGCATCTGTAAGC +
Preference number: 5 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPLVLTI*KHASVS
Trigger: GCTTACAGATGCATGCTTCAAGATCGTGAGGACCAG...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGCAGAATTGGATTTGCTaGCAAAAGCTGCCGTTCAAG +
Preference number: 5 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEQNWIC*QKLPFK
Trigger: CTTGAACGGCAGCTTTTGCAAGCAAATCCAATTCTG...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTCCTGGAAATTATCTTaGTCTTGCTGTCCCGGAATA +
Preference number: 5 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCSWKLS*SCCPGI
Trigger: TATTCCGGGACAGCAAGACAAAGATAATTTCCAGGA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTGTGGGAACCTTGCTCTaGAACCAGTTTTTCAACAAA +
Preference number: 5 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCVGTLL*NQFFNK
Trigger: TTTGTTGAAAAACTGGTTCAAGAGCAAGGTTCCCAC...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTTCCATCTTCTTGATCTaGGCCTCTGCTGTCACCTTT +
Preference number: 5 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCSIFLI*ASAVTF
Trigger: AAAGGTGACAGCAGAGGCCAAGATCAAGAAGATGGA...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGCATTCTGCAGCTTACTaGCTTTCTCCGCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGHSAAY*LSPPAP
Trigger: TGGAGCTGGCGGAGAAAGCAAGTAAGCTGCAGAATG...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATTCCAGCAGCGCGGACTaGCCAGAGGCGCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDSSSAD*PEALLV
Trigger: CACCAACAGCGCCTCTGGCAAGTCCGCGCTGCTGGA...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTAGCCTTAAGACACAGTaGATCTTTCAGGAAGGAATC +
Preference number: 5 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCSLKTQ*IFQEGI
Trigger: GATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCT...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTTCCGTAATGTCAGTTaGCTTAACTACCAACCAAAA +
Preference number: 5 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTFRNVS*LNYQPK
Trigger: TTTTGGTTGGTAGTTAAGCAAACTGACATTACGGAA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGTCTAGGAGACTTGATGTGGCTGAGGAGTCGGGGGCCACGTGAACACAGAACTTTTAACCCAAAAGGTTaGTGTTTTCAAGCACATTGC +
Preference number: 5 (lower is better)
Translates to: GLGDLMWLRSRGPREHRTFNPKG*CFQAHC
Trigger: GCAATGTGCTTGAAAACACAAACCTTTTGGGTTAAA...AGTTCTGTGTTCACGTGGCCCCCGACTCCTCAGCCACATCAAGTCTCCTAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS GCA 90 bp CTGTCCACAAAGAGATACCTCTCTGGATCCTCGAGTCCAGTTCTCTaGGCCATTGTAAATGGAACGATCCAAAAGCAATTGCCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: LSTKRYLSGSSSPVL*AIVNGTIQKQLPLQ
Trigger: CTGAAGAGGCAATTGCTTTTGGATCGTTCCATTTACAATGGCGCAGAGAACTGGACTCGAGGATCCAGAGAGGTATCTCTTTGTGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS GCA 90 bp CTGTCCACAAAGAGATACCTCTCTGGATCCTCGAGTCCAGTTCTCTaGGCCATTGTAAATGGAACGATCCAAAAGCAATTGCCTCGAGTT +
Preference number: 5 (lower is better)
Translates to: LSTKRYLSGSSSPVL*AIVNGTIQKQLPRV
Trigger: AACTCGAGGCAATTGCTTTTGGATCGTTCCATTTACAATGGCGCAGAGAACTGGACTCGAGGATCCAGAGAGGTATCTCTTTGTGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411957.1
CDS GCA 90 bp GTGAAAGTGCAGCAGCACAAGCTTTGTGGAACAAATGACAGGAGATaGCATATAGGTAAGGCAGTCAGCATACTTAGGCACTGCACAAGC +
Preference number: 5 (lower is better)
Translates to: VKVQQHKLCGTNDRR*HIGKAVSILRHCTS
Trigger: GCTTGTGCAGTGCCTAAGTATGCTGACTGCCTTACCTATATGGCATCTCCTGTCATTTGTTCCACAAAGCTTGTGCTGCTGCACTTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469865.1
CDS-3UTR CAA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACAGCTGTCCAATCAGCTaGAGTGGCAGGGTTGTAGAT +
Preference number: 5 (lower is better)
Translates to: VNIQEDGICSGGSINLIDSCPIS*SGRVVD
Trigger: ATCTACAACCCTGCCACTCAAGCTGATTGGACAGCT...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp TTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATTGCCCAGTTACATCAAAGTaGATCCGAATAAATTTGCCA +
Preference number: 5 (lower is better)
Translates to: FRNLQEAPGAFLTVPLYCPVTSK*IRINLP
Trigger: TGGCAAATTTATTCGGATCAACTTTGATGTAACTGG...GCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTACGTTCATCTTTTGCTaGACGAACAGCACGAGACTT +
Preference number: 5 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCTFIFC*TNSTRL
Trigger: AAGTCTCGTGCTGTTCGTCAAGCAAAAGATGAACGT...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGTGGGAACCTTGCTCTaGAACCAGTTTTTCAACAAA +
Preference number: 5 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEVGTLL*NQFFNK
Trigger: TTTGTTGAAAAACTGGTTCAAGAGCAAGGTTCCCAC...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTGCTCTGAAAAATATCTaGCTCTGTCCAATTCTGTAC +
Preference number: 5 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCALKNI*LCPILY
Trigger: GTACAGAATTGGACAGAGCAAGATATTTTTCAGAGC...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGATGAACTTGGAATTTaGGTCCTCGAGAAGCAGAAT +
Preference number: 5 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEDELGI*VLEKQN
Trigger: ATTCTGCTTCTCGAGGACCAAAATTCCAAGTTCATC...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACGTCTCCAGGCCCTGCTaGTTCTTCTCTAGATTTGCT +
Preference number: 5 (lower is better)
Translates to: VNIQEDGICSGGSINLIDVSRPC*FFSRFA
Trigger: AGCAAATCTAGAGAAGAACAAGCAGGGCCTGGAGAC...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTCTTCCAGACTTTCAATaGTTCCCAGGTCGTCATCTA +
Preference number: 5 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCLPDFQ*FPGRHL
Trigger: TAGATGACGACCTGGGAACAATTGAAAGTCTGGAAG...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACACCAATATTCCCATTTaGGGCTCAAAGCAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: VNIQEDGICSGGSINLIDTNIPI*GSKQRL
Trigger: CAGCCGCTGCTTTGAGCCCAAAATGGGAATATTGGT...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS TCA 90 bp TCTTGGTTTTATATGCGGAGCCAAAAGCTGTCTCAGTCATACCAGTaGCTTGATCCAGACCCACGATACGGTCCACATCTTTCCAAAGCT +
Preference number: 5 (lower is better)
Translates to: SWFYMRSQKLSQSYQ*LDPDPRYGPHLSKA
Trigger: AGCTTTGGAAAGATGTGGACCGTATCGTGGGTCTGGATCAAGTCACTGGTATGACTGAGACAGCTTTTGGCTCCGCATATAAAACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269243.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCAAATGATTCCAGAATaGGATTTGCTTGCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCQMIPE*DLLAKA
Trigger: AGCTTTTGCAAGCAAATCCAATTCTGGAATCATTTG...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACCGAAACATGCCCTTCTaGGTTTTATATGCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: VNIQEDGICSGGSINLIDRNMPF*VLYAEP
Trigger: TGGCTCCGCATATAAAACCAAGAAGGGCATGTTTCG...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGAAGGAATCCCGTAGCTaGCCAATTTCCGAAATCTGC +
Preference number: 5 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGKESRS*PISEIC
Trigger: GCAGATTTCGGAAATTGGCAAGCTACGGGATTCCTT...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTAGCTTGCCAATTTCCGAAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTTTTAACCCAAAAGGTTaGTGTTTTCAAGCACATTGC +
Preference number: 5 (lower is better)
Translates to: VACQFPKSAGGPGCIPNCFNPKG*CFQAHC
Trigger: GCAATGTGCTTGAAAACACAAACCTTTTGGGTTAAA...ACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTTCGGAAATTGGCAAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGACGTTCATCTTTTGCTaGACGAACAGCACGAGACTT +
Preference number: 5 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGTFIFC*TNSTRL
Trigger: AAGTCTCGTGCTGTTCGTCAAGCAAAAGATGAACGT...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGGATGAACTTGGAATTTaGGTCCTCGAGAAGCAGAAT +
Preference number: 5 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPDELGI*VLEKQN
Trigger: ATTCTGCTTCTCGAGGACCAAAATTCCAAGTTCATC...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGCTTCCAGACTTTCAATaGTTCCCAGGTCGTCATCTA +
Preference number: 5 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGLPDFQ*FPGRHL
Trigger: TAGATGACGACCTGGGAACAATTGAAAGTCTGGAAG...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATGTTCGCAGCCTCGATTaGGGCTTCGAGGTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDVRSLD*GFEVLQ
Trigger: CTGAAGGACCTCGAAGCCCAAATCGAGGCTGCGAAC...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GGAGTCACACCCACTGGCATGTCAACATTCAGGAAGATGGCATCTGTTCTGGAGTTCCGTAATGTCAGTTaGCTTAACTACCAACCAAAA +
Preference number: 5 (lower is better)
Translates to: GVTPTGMSTFRKMASVLEFRNVS*LNYQPK
Trigger: TTTTGGTTGGTAGTTAAGCAAACTGACATTACGGAA...CTCCAGAACAGATGCCATCTTCCTGAATGTTGACATGCCAGTGGGTGTGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTGTCTGTAATACCACTTaGACTAGAGAGGTACATGAT +
Preference number: 5 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCVCNTT*TREVHD
Trigger: ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGAC...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CCA 90 bp ATACCTCTCTGGATCCTCGAGTCCAGTTCTCTGCGCCATTGTAAATaGAACGATCCAAAAGCAATTGCCTCGAGTTTCCAAGGTAAATTT +
Preference number: 5 (lower is better)
Translates to: IPLWILESSSLRHCK*NDPKAIASSFQGKF
Trigger: AAATTTACCTTGGAAACTCGAGGCAATTGCTTTTGGATCGTTCCATTTACAATGGCGCAGAGAACTGGACTCGAGGATCCAGAGAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411957.1
CDS-3UTR CAA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGGCTCTGAAAAATATCTaGCTCTGTCCAATTCTGTAC +
Preference number: 5 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPALKNI*LCPILY
Trigger: GTACAGAATTGGACAGAGCAAGATATTTTTCAGAGC...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGGATGAACTTGGAATTTaGGTCCTCGAGAAGCAGAAT +
Preference number: 5 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGDELGI*VLEKQN
Trigger: ATTCTGCTTCTCGAGGACCAAAATTCCAAGTTCATC...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CAGCGACCCGCAACCAAGGGCCTGGAGTTTGTTTTAAAAAGGGTCTTACCATGTTTTTCTTTGATGAACTaGGAATTTTGGTCCTCGAGA +
Preference number: 5 (lower is better)
Translates to: QRPATKGLEFVLKRVLPCFSLMN*EFWSSR
Trigger: TCTCGAGGACCAAAATTCCAAGTTCATCAAAGAAAA...ACATGGTAAGACCCTTTTTAAAACAAACTCCAGGCCCTTGGTTGCGGGTCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATGCTCCTCCAGGGCTGTaGCGTGTCTTTGTCTCATGT +
Preference number: 5 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDAPPGL*RVFVSC
Trigger: ACATGAGACAAAGACACGCAACAGCCCTGGAGGAGC...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATGCCAGTGACAGGGCTTaGGTTTCTTTCTCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDASDRA*VSFSLA
Trigger: GGCCAGAGAGAAAGAAACCAAAGCCCTGTCACTGGC...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATCGACGGACTAATTTGTaGGCGGCTGCTCGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDRRTNL*AAARSL
Trigger: CAAGGAACGAGCAGCCGCCAACAAATTAGTCCGTCG...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GTCAACATTCAGGAAGATGGCATCTGTTCTGGAGGCTCCATAAACCTCATTGACAGCCTTAAGACACAGTaGATCTTTCAGGAAGGAATC +
Preference number: 5 (lower is better)
Translates to: VNIQEDGICSGGSINLIDSLKTQ*IFQEGI
Trigger: GATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCT...GTCAATGAGGTTTATGGAGCCTCCAGAACAGATGCCATCTTCCTGAATGTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGGTCTGTAATACCACTTaGACTAGAGAGGTACATGAT +
Preference number: 5 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPVCNTT*TREVHD
Trigger: ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGAC...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS GCA 90 bp TCTTCAACCCTAGACTCCAAGTCATGTAGAATCTCTTCTAATTCCTaGTTTTTAGCAGCAAGTCTTGCCCTCATCTCTTCTGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: SSTLDSKSCRISSNS*FLAASLALISSASA
Trigger: TGCTGAAGCAGAAGAGATGAGGGCAAGACTTGCTGCTAAAAAGCAGGAATTAGAAGAGATTCTACATGACTTGGAGTCTAGGGTTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp ATGCATAGGCTGGAGAGCCTTAAGACACAGTTGATCTTTCAGGAAGGAATCCCGACAACTTTAAGGGCATaGTTCTTATGGAGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: MHRLESLKTQLIFQEGIPTTLRA*FLWSVS
Trigger: TGAAACACTCCATAAGAACAATGCCCTTAAAGTTGT...CGGGATTCCTTCCTGAAAGATCAACTGTGTCTTAAGGCTCTCCAGCCTATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATTCGAGCTTCTTCCTCTaGTGCTCAGACTCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDSSFFL*CSDSAL
Trigger: CAAGGCTGAGTCTGAGCACAAGAGGAAGAAGCTCGA...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATCATTCTGCAGCTTACTaGCTTTCTCCGCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDHSAAY*LSPPAP
Trigger: TGGAGCTGGCGGAGAAAGCAAGTAAGCTGCAGAATG...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATAGTCATACCAGTGACTaGATCCAGACCCACGATACG +
Preference number: 5 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDSHTSD*IQTHDT
Trigger: CGTATCGTGGGTCTGGATCAAGTCACTGGTATGACT...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp CCAACCAAAAACAGGATGCTAAGTGTTCACTGTAACACTGTCCAAAGGGAAGGGTTTTCTTTGATGAACTaGGAATTTTGGTCCTCGAGA +
Preference number: 5 (lower is better)
Translates to: PTKNRMLSVHCNTVQREGFSLMN*EFWSSR
Trigger: TCTCGAGGACCAAAATTCCAAGTTCATCAAAGAAAA...CCCTTCCCTTTGGACAGTGTTACAGTGAACACTTAGCATCCTGTTTTTGGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATTCCATCTTCTTGATCTaGGCCTCTGCTGTCACCTTT +
Preference number: 5 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDSIFLI*ASAVTF
Trigger: AAAGGTGACAGCAGAGGCCAAGATCAAGAAGATGGA...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS GCA 90 bp CTTCTGAATATCATCTTTGTTGACCATTGCTTTCTTTCCATTCTCTaGCAACTCCACCATAACTTCATCTCCCCGTTCTTCTTTGATACT +
Preference number: 5 (lower is better)
Translates to: LLNIIFVDHCFLSIL*QLHHNFISPFFFDT
Trigger: AGTATCAAAGAAGAACGGGGAGATGAAGTTATGGTGGAGTTGGCAGAGAATGGAAAGAAAGCAATGGTCAACAAAGATGATATTCAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
ENST00000411957.1
CDS TCA 90 bp CCGTTCAAGTTCCCCAGGAATATTATGGTCCTTTCTTCCTTTATGTaGAGAAGCAACATGGGCAAGGTACTGAATAACTTTCTTTGTATT +
Preference number: 5 (lower is better)
Translates to: PFKFPRNIMVLSSFM*RSNMGKVLNNFLCI
Trigger: AATACAAAGAAAGTTATTCAGTACCTTGCCCATGTTGCTTCTTCACATAAAGGAAGAAAGGACCATAATATTCCTGGGGAACTTGAACGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269243.8
ENST00000472728.1
CDS-3UTR CAA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATAGATTCTTTGTAGAGTaGCCCAACGGTACGAAACAT +
Preference number: 5 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDRFFVE*PNGTKH
Trigger: ATGTTTCGTACCGTTGGGCAACTCTACAAAGAATCT...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS-3UTR CAA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATCAATTCTGTACAAGTTaGGGTCCAATTCTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDQFCTS*GPILKP
Trigger: GGGCTTTAGAATTGGACCCAAACTTGTACAGAATTG...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS TCA 90 bp TTTAGGCGATTCCTGAGGAATATTATGGTCCTTTCTTCCTTTATGTaGAGAAGCAACATGGGCAAGGTACTGAATAACTTTCTTTGTATT +
Preference number: 5 (lower is better)
Translates to: FRRFLRNIMVLSSFM*RSNMGKVLNNFLCI
Trigger: AATACAAAGAAAGTTATTCAGTACCTTGCCCATGTTGCTTCTTCACATAAAGGAAGAAAGGACCATAATATTCCTCAGGAATCGCCTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360416.8
CDS TCA 90 bp TGGTTTAGGCGATTCAGGAATATTATGGTCCTTTCTTCCTTTATGTaGAGAAGCAACATGGGCAAGGTACTGAATAACTTTCTTTGTATT +
Preference number: 5 (lower is better)
Translates to: WFRRFRNIMVLSSFM*RSNMGKVLNNFLCI
Trigger: AATACAAAGAAAGTTATTCAGTACCTTGCCCATGTTGCTTCTTCACATAAAGGAAGAAAGGACCATAATATTCCTGAATCGCCTAAACCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379980.8
CDS-3UTR CAA 90 bp GATTCATTGTCACTGAATGTCTGTAATACCACTTTGACTAGAGAGGTACATGATTTTAACCCAAAAGGTTaGTGTTTTCAAGCACATTGC +
Preference number: 5 (lower is better)
Translates to: DSLSLNVCNTTLTREVHDFNPKG*CFQAHC
Trigger: GCAATGTGCTTGAAAACACAAACCTTTTGGGTTAAA...ATCATGTACCTCTCTAGTCAAAGTGGTATTACAGACATTCAGTGACAATGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS TCA 72 bp TGGGGCCACCCCGCCTCAGCCGGTTCTTCAGGGTGCTaGCCTCGCGGCTCAGGCCCTCGTTGGCCTCGGTGG +
Preference number: 6 (lower is better)
Translates to: WGHPASAGSSGC*PRGSGPRWPRW
Trigger: CCACCGAGGCCAACGAGGGCCTGAGCCGCGAGGTCAGCACCCTGAAGAACCGGCTGAGGCGGGGTGGCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CCA 72 bp AACTCAGCCCCATGGGCTCCCGTGCAGCGCAGCTGCTaGGCTGCAGACCTGGCCAGTGCGCCCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: NSAPWAPVQRSC*AADLASAPCSS
Trigger: GGAGCTGCAGGGCGCACTGGCCAGGTCTGCAGCCCAGCAGCTGCGCTGCACGGGAGCCCATGGGGCTGAGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465458.1
CDS CCA 72 bp TGCCGCTCCAGTTGCTGGCGTGCATTGTCACTCTTCTaGGCGGCGCTGCGCTCGGCTGCTAGCTCGGCGTTC +
Preference number: 6 (lower is better)
Translates to: CRSSCWRALSLF*AALRSAASSAF
Trigger: GAACGCCGAGCTAGCAGCCGAGCGCAGCGCCGCCCAGAAGAGTGACAATGCACGCCAGCAACTGGAGCGGCA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
ENST00000476737.1
CDS CAA 90 bp CTCAGCCGGTTCTTCAGGGTGCTGACCTCGCGGCTCAGGCCCTCGTaGGCCTCGGTGGCATCATCCAGTTCCCGCTGGAGTTTACGCCGA +
Preference number: 6 (lower is better)
Translates to: LSRFFRVLTSRLRPS*ASVASSSSRWSLRR
Trigger: TCGGCGTAAACTCCAGCGGGAACTGGATGATGCCACCGAGGCCAACGAGGGCCTGAGCCGCGAGGTCAGCACCCTGAAGAACCGGCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS GCA 72 bp GTTGCTGGCGTGCATTGTCACTCTTCTGGGCGGCGCTaGGCTCGGCTGCTAGCTCGGCGTTCAGTGTGTCCA +
Preference number: 6 (lower is better)
Translates to: VAGVHCHSSGRR*ARLLARRSVCP
Trigger: TGGACACACTGAACGCCGAGCTAGCAGCCGAGCGCAGCGCCGCCCAGAAGAGTGACAATGCACGCCAGCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
ENST00000476737.1
CDS CCA 72 bp CCCTCGTTGGCCTCGGTGGCATCATCCAGTTCCCGCTaGAGTTTACGCCGAGATGCGTTGGCACGCGTCGCT +
Preference number: 6 (lower is better)
Translates to: PSLASVASSSSR*SLRRDALARVA
Trigger: AGCGACGCGTGCCAACGCATCTCGGCGTAAACTCCAGCGGGAACTGGATGATGCCACCGAGGCCAACGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CCA 72 bp GATGGGTTTGCCCTCAGTTACTTCAGCCGAAGATGGTaGCGCGGGCGCACGTCCCCAGCCGCGACCACAGAT +
Preference number: 6 (lower is better)
Translates to: DGFALSYFSRRW*RGRTSPAATTD
Trigger: ATCTGTGGTCGCGGCTGGGGACGTGCGCCCGCGCCACCATCTTCGGCTGAAGTAACTGAGGGCAAACCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411957.1
CDS CAA 72 bp TTCTTCAGGGTGCTGACCTCGCGGCTCAGGCCCTCGTaGGCCTCGGTGGCATCATCCAGTTCCCGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: FFRVLTSRLRPS*ASVASSSSRWS
Trigger: ACTCCAGCGGGAACTGGATGATGCCACCGAGGCCAACGAGGGCCTGAGCCGCGAGGTCAGCACCCTGAAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CAA 90 bp GCTTTCTCCGCCAGCTCCACCCTGAGCCTGTCGCCTTCAGAGACCTaGGCATGGAGCTCCTGGACCTGCGCGTCGAGCTTCTTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: AFSASSTLSLSPSET*AWSSWTCASSFFLL
Trigger: CAAGAGGAAGAAGCTCGACGCGCAGGTCCAGGAGCTCCATGCCAAGGTCTCTGAAGGCGACAGGCTCAGGGTGGAGCTGGCGGAGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CCA 72 bp CGATCCAAAAGCAATTGCCTCTTCAGCCGAAGATGGTaGCGCGGGCGCACGTCCCCAGCCGCGACCACAGAT +
Preference number: 6 (lower is better)
Translates to: RSKSNCLFSRRW*RGRTSPAATTD
Trigger: ATCTGTGGTCGCGGCTGGGGACGTGCGCCCGCGCCACCATCTTCGGCTGAAGAGGCAATTGCTTTTGGATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CCA 72 bp TCCACCCTGAGCCTGTCGCCTTCAGAGACCTTGGCATaGAGCTCCTGGACCTGCGCGTCGAGCTTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: STLSLSPSETLA*SSWTCASSFFL
Trigger: GAGGAAGAAGCTCGACGCGCAGGTCCAGGAGCTCCATGCCAAGGTCTCTGAAGGCGACAGGCTCAGGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CAA 72 bp TGGAGCTCCTGGACCTGCGCGTCGAGCTTCTTCCTCTaGTGCTCAGACTCAGCCTTGACCTGCTGCAGGACC +
Preference number: 6 (lower is better)
Translates to: WSSWTCASSFFL*CSDSALTCCRT
Trigger: GGTCCTGCAGCAGGTCAAGGCTGAGTCTGAGCACAAGAGGAAGAAGCTCGACGCGCAGGTCCAGGAGCTCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS TCA 72 bp TCTCTCCTGCTCGGCGTGTCGGCGGGCTCGCTCAGATaGGGCAAGTTCCTAAGCAGTGGAGACTGCGTTAAG +
Preference number: 6 (lower is better)
Translates to: SLLLGVSAGSLR*GKFLSSGDCVK
Trigger: CTTAACGCAGTCTCCACTGCTTAGGAACTTGCCTCATCTGAGCGAGCCCGCCGACACGCCGAGCAGGAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476737.1
CDS CCA 72 bp AGCCTGTCGCCTTCAGAGACCTTGGCATGGAGCTCCTaGACCTGCGCGTCGAGCTTCTTCCTCTTGTGCTCA +
Preference number: 6 (lower is better)
Translates to: SLSPSETLAWSS*TCASSFFLLCS
Trigger: TGAGCACAAGAGGAAGAAGCTCGACGCGCAGGTCCAGGAGCTCCATGCCAAGGTCTCTGAAGGCGACAGGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS GCA 72 bp GGCATCATCCAGTTCCCGCTGGAGTTTACGCCGAGATaGGTTGGCACGCGTCGCTTCTTCTTCTGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: GIIQFPLEFTPR*VGTRRFFFCFL
Trigger: GAGGAAGCAGAAGAAGAAGCGACGCGTGCCAACGCATCTCGGCGTAAACTCCAGCGGGAACTGGATGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CCA 72 bp CAGGGAGGCACTTCCTCGCGTACCTGCTCTTTATACTaGTCCGCGTGTCGACGCTCATCCTCAACCTGCATG +
Preference number: 6 (lower is better)
Translates to: QGGTSSRTCSLY*SACRRSSSTCM
Trigger: CATGCAGGTTGAGGATGAGCGTCGACACGCGGACCAGTATAAAGAGCAGGTACGCGAGGAAGTGCCTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476737.1
CDS GCA 72 bp CGGCCCGGTCCCGCTCTTCGGCATAGCGAGCAGAGATaGTCTTCTCTTCTGCTAACAGCTGGTCAAACTTCT +
Preference number: 6 (lower is better)
Translates to: RPGPALRHSEQR*SSLLLTAGQTS
Trigger: AGAAGTTTGACCAGCTGTTAGCAGAAGAGAAGAGCATCTCTGCTCGCTATGCCGAAGAGCGGGACCGGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CAA 90 bp AAATCTGCAGGAGGCCCCGGGTGCATTCCTAACTGTCCCACTGTATaGCCTCCTCTGGCTTCCTGCAACTTTACTCTGACTGGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: KSAGGPGCIPNCPTV*PPLASCNFTLTGVA
Trigger: AGCCACCCCAGTCAGAGTAAAGTTGCAGGAAGCCAGAGGAGGCAATACAGTGGGACAGTTAGGAATGCACCCGGGGCCTCCTGCAGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS TCA 72 bp GGGTTTTTGAATGCTCCCGAACATAACAAAGTCTGCTaGAACTCAGCCCCATGGGCTCCCGTGCAGCGCAGC +
Preference number: 6 (lower is better)
Translates to: GFLNAPEHNKVC*NSAPWAPVQRS
Trigger: GCTGCGCTGCACGGGAGCCCATGGGGCTGAGTTTCAGCAGACTTTGTTATGTTCGGGAGCATTCAAAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465458.1
CDS GCA 72 bp AGAAGCGGCTTCACCTTTGTGAAGACTCGCCACCACTaGCAGTGCCGTAATTTCAGGTACGCGGCACAGTTC +
Preference number: 6 (lower is better)
Translates to: RSGFTFVKTRHH*QCRNFRYAAQF
Trigger: GAACTGTGCCGCGTACCTGAAATTACGGCACTGGCAGTGGTGGCGAGTCTTCACAAAGGTGAAGCCGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS GCA 72 bp CCTAACTGTCCCACTGTATTGCCTCCTCTGGCTTCCTaGAACTTTACTCTGACTGGGGTGGCTGCGTCTCGT +
Preference number: 6 (lower is better)
Translates to: PNCPTVLPPLAS*NFTLTGVAASR
Trigger: ACGAGACGCAGCCACCCCAGTCAGAGTAAAGTTGCAGGAAGCCAGAGGAGGCAATACAGTGGGACAGTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CAA 72 bp AGCTTGCGGAGCTGCTTAATCACCTCATCCCGAGCTTaGTTCGCAGCCTCGATTTGGGCTTCGAGGTCCTTC +
Preference number: 6 (lower is better)
Translates to: SLRSCLITSSRA*FAASIWASRSF
Trigger: GAAGGACCTCGAAGCCCAAATCGAGGCTGCGAACAAAGCTCGGGATGAGGTGATTAAGCAGCTCCGCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS GCA 72 bp TCTAGATTTGCTTTGAACCGCTTGGCCTGTTCCAGCTaGTCTGAGAGCTCCTCCAGGGCTGTTGCGTGTCTT +
Preference number: 6 (lower is better)
Translates to: SRFALNRLACSS*SESSSRAVACL
Trigger: AAGACACGCAACAGCCCTGGAGGAGCTCTCAGAGCAGCTGGAACAGGCCAAGCGGTTCAAAGCAAATCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS GCA 72 bp GACTGTTCTTCTCCTCTTCCAGCTGCCGGATCCGACTaGTCAGGTTTAGTTTCTGGCGTGTCTCCTCCTGAA +
Preference number: 6 (lower is better)
Translates to: DCSSPLPAAGSD*SGLVSGVSPPE
Trigger: TTCAGGAGGAGACACGCCAGAAACTAAACCTGAGCAGTCGGATCCGGCAGCTGGAAGAGGAGAAGAACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
ENST00000488329.1
CDS CAA 90 bp TCTGGCTTCCTGCAACTTTACTCTGACTGGGGTGGCTGCGTCTCGTaGACATCACTGGTCTTACTTTCTGTGTCATCGTCGGAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: SGFLQLYSDWGGCVS*TSLVLLSVSSSESS
Trigger: GGAGCTCTCCGACGATGACACAGAAAGTAAGACCAGTGATGTCAACGAGACGCAGCCACCCCAGTCAGAGTAAAGTTGCAGGAAGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS TCA 72 bp TATATGCGGAGCCAAAAGCTGTCTCAGTCATACCAGTaGCTTGATCCAGACCCACGATACGGTCCACTGGGG +
Preference number: 6 (lower is better)
Translates to: YMRSQKLSQSYQ*LDPDPRYGPLG
Trigger: CCCCAGTGGACCGTATCGTGGGTCTGGATCAAGTCACTGGTATGACTGAGACAGCTTTTGGCTCCGCATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469865.1
CDS GCA 72 bp CAGTGCCGTAATTTCAGGTACGCGGCACAGTTCCGCTaGAAGACCTTTAAGGCACTTAGTTGCTGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: QCRNFRYAAQFR*KTFKALSCCCF
Trigger: GAAGCAGCAGCAACTAAGTGCCTTAAAGGTCTTGCAGCGGAACTGTGCCGCGTACCTGAAATTACGGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CCA 72 bp CTTTCAGCTTCTTCTCAGTGCGACGGACTAATTTGTTaGCGGCTGCTCGTTCCTTGGCTTCCTGCTCAAGCT +
Preference number: 6 (lower is better)
Translates to: LSASSQCDGLIC*RLLVPWLPAQA
Trigger: AGCTTGAGCAGGAAGCCAAGGAACGAGCAGCCGCCAACAAATTAGTCCGTCGCACTGAGAAGAAGCTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
ENST00000476737.1
CDS CAA 90 bp TTCACCTCACACGCCAGCTCCTTGTTATCTGTCTCCAGGCCCTGCTaGTTCTTCTCTAGATTTGCTTTGAACCGCTTGGCCTGTTCCAGC +
Preference number: 6 (lower is better)
Translates to: FTSHASSLLSVSRPC*FFSRFALNRLACSS
Trigger: GCTGGAACAGGCCAAGCGGTTCAAAGCAAATCTAGAGAAGAACAAGCAGGGCCTGGAGACAGATAACAAGGAGCTGGCGTGTGAGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CAA 90 bp GGTTTTATATGCGGAGCCAAAAGCTGTCTCAGTCATACCAGTGACTaGATCCAGACCCACGATACGGTCCACTGGTGGCTCATGAAGACC +
Preference number: 6 (lower is better)
Translates to: GFICGAKSCLSHTSD*IQTHDTVHWWLMKT
Trigger: GGTCTTCATGAGCCACCAGTGGACCGTATCGTGGGTCTGGATCAAGTCACTGGTATGACTGAGACAGCTTTTGGCTCCGCATATAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360416.8
CDS TCA 72 bp ATGCTCCCTGACGTTTGGTCCTATCCAGAGCTTTATTaGTGCGATGAACGAGCCAGCGAAAGAGCCGCTCAT +
Preference number: 6 (lower is better)
Translates to: MLPDVWSYPELY*CDERASERAAH
Trigger: ATGAGCGGCTCTTTCGCTGGCTCGTTCATCGCATCAATAAAGCTCTGGATAGGACCAAACGTCAGGGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS TCA 72 bp TGCAACTTTACTCTGACTGGGGTGGCTGCGTCTCGTTaGCATCACTGGTCTTACTTTCTGTGTCATCGTCGG +
Preference number: 6 (lower is better)
Translates to: CNFTLTGVAASR*HHWSYFLCHRR
Trigger: CCGACGATGACACAGAAAGTAAGACCAGTGATGTCAACGAGACGCAGCCACCCCAGTCAGAGTAAAGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS TCA 72 bp TATATGCGGAGCCAAAAGCTGTCTCAGTCATACCAGTaGCTTGATCCAGACCCACGATACGGTCCACTGGTG +
Preference number: 6 (lower is better)
Translates to: YMRSQKLSQSYQ*LDPDPRYGPLV
Trigger: CACCAGTGGACCGTATCGTGGGTCTGGATCAAGTCACTGGTATGACTGAGACAGCTTTTGGCTCCGCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360416.8
CDS GCA 72 bp ACCTGTTTGATCAGCAGCCGCTTCTTCTCTTCATTCTaGTCATCCCTGGTTTGCAGGTCTCTCTCGAACTGC +
Preference number: 6 (lower is better)
Translates to: TCLISSRFFSSF*SSLVCRSLSNC
Trigger: GCAGTTCGAGAGAGACCTGCAAACCAGGGATGAGCAGAATGAAGAGAAGAAGCGGCTGCTGATCAAACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS GCA 72 bp TCTGGCTTCCTGCAACTTTACTCTGACTGGGGTGGCTaGGTCTCGTTGACATCACTGGTCTTACTTTCTGTG +
Preference number: 6 (lower is better)
Translates to: SGFLQLYSDWGG*VSLTSLVLLSV
Trigger: CACAGAAAGTAAGACCAGTGATGTCAACGAGACGCAGCCACCCCAGTCAGAGTAAAGTTGCAGGAAGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CAA 72 bp CTGCAACTTTACTCTGACTGGGGTGGCTGCGTCTCGTaGACATCACTGGTCTTACTTTCTGTGTCATCGTCG +
Preference number: 6 (lower is better)
Translates to: LQLYSDWGGCVS*TSLVLLSVSSS
Trigger: CGACGATGACACAGAAAGTAAGACCAGTGATGTCAACGAGACGCAGCCACCCCAGTCAGAGTAAAGTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS GCA 72 bp TCACACGCCAGCTCCTTGTTATCTGTCTCCAGGCCCTaGTTGTTCTTCTCTAGATTTGCTTTGAACCGCTTG +
Preference number: 6 (lower is better)
Translates to: SHASSLLSVSRP*LFFSRFALNRL
Trigger: CAAGCGGTTCAAAGCAAATCTAGAGAAGAACAAGCAGGGCCTGGAGACAGATAACAAGGAGCTGGCGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CCA 72 bp TGTAGCTCTCGCACAACTTTAAGGGCATTGTTCTTATaGAGTGTTTCATCATCACCTCTGGCCAGTGCGCCC +
Preference number: 6 (lower is better)
Translates to: CSSRTTLRALFL*SVSSSPLASAP
Trigger: GGGCGCACTGGCCAGAGGTGATGATGAAACACTCCATAAGAACAATGCCCTTAAAGTTGTGCGAGAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CAA 72 bp ATTTCTTTCAGCTTCTTCTCAGTGCGACGGACTAATTaGTTGGCGGCTGCTCGTTCCTTGGCTTCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: ISFSFFSVRRTN*LAAARSLASCS
Trigger: TGAGCAGGAAGCCAAGGAACGAGCAGCCGCCAACAAATTAGTCCGTCGCACTGAGAAGAAGCTGAAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
ENST00000476737.1
CDS CAA 90 bp GGTTTTATATGCGGAGCCAAAAGCTGTCTCAGTCATACCAGTGACTaGATCCAGACCCACGATACGGTCCACATCTTTCCAAAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: GFICGAKSCLSHTSD*IQTHDTVHIFPKLC
Trigger: GCAGAGCTTTGGAAAGATGTGGACCGTATCGTGGGTCTGGATCAAGTCACTGGTATGACTGAGACAGCTTTTGGCTCCGCATATAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269243.8
ENST00000379980.8
CDS CAA 90 bp AGTTCAGCAATTTGGGCTTGTAGCTCTCGCACAACTTTAAGGGCATaGTTCTTATGGAGTGTTTCATCATCACCTCTGGCCAGTGCGCCC +
Preference number: 6 (lower is better)
Translates to: SSAIWACSSRTTLRA*FLWSVSSSPLASAP
Trigger: GGGCGCACTGGCCAGAGGTGATGATGAAACACTCCATAAGAACAATGCCCTTAAAGTTGTGCGAGAGCTACAAGCCCAAATTGCTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS TCA 72 bp TATATGCGGAGCCAAAAGCTGTCTCAGTCATACCAGTaGCTTGATCCAGACCCACGATACGGTCCACATCTT +
Preference number: 6 (lower is better)
Translates to: YMRSQKLSQSYQ*LDPDPRYGPHL
Trigger: AAGATGTGGACCGTATCGTGGGTCTGGATCAAGTCACTGGTATGACTGAGACAGCTTTTGGCTCCGCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269243.8
ENST00000379980.8
CDS TCA 72 bp TTCTCCTTCACCTTCAACAGCTCTTCATCTTTGGCCTaGAGTTCTTCCTCCTGGCGAGTCACTTGTAGAAGC +
Preference number: 6 (lower is better)
Translates to: FSFTFNSSSSLA*SSSSWRVTCRS
Trigger: GCTTCTACAAGTGACTCGCCAGGAGGAAGAACTTCAGGCCAAAGATGAAGAGCTGTTGAAGGTGAAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CCA 72 bp TGGATCCTCGAGTCCAGTTCTCTGCGCCATTGTAAATaGAACGATCCAAAAGCAATTGCCTCTTCAGCCGAA +
Preference number: 6 (lower is better)
Translates to: WILESSSLRHCK*NDPKAIASSAE
Trigger: TTCGGCTGAAGAGGCAATTGCTTTTGGATCGTTCCATTTACAATGGCGCAGAGAACTGGACTCGAGGATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CCA 72 bp GCCCGAGTAAACTCCATCACATTCATCCCAAGAAGATaGCAGAGCTTCTGCGCAACTGTATTTTCTGGCATG +
Preference number: 6 (lower is better)
Translates to: ARVNSITFIPRR*QSFCATVFSGM
Trigger: CATGCCAGAAAATACAGTTGCGCAGAAGCTCTGCCATCTTCTTGGGATGAATGTGATGGAGTTTACTCGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CAA 90 bp CCATTCTCTGCCAACTCCACCATAACTTCATCTCCCCGTTCTTCTTaGATACTAGCTGCCTCAAAACCATGGCGTTCTGATGGAATCCAC +
Preference number: 6 (lower is better)
Translates to: PFSANSTITSSPRSS*ILAASKPWRSDGIH
Trigger: GTGGATTCCATCAGAACGCCATGGTTTTGAGGCAGCTAGTATCAAAGAAGAACGGGGAGATGAAGTTATGGTGGAGTTGGCAGAGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
ENST00000411957.1
CDS CAA 90 bp GTTTCCAAGGTAAATTTCAGCGGTGACCACAAATTATGGCTCTGGTaGTCTGATGGGTTTGCCCTCAGTTACTTCAGCCGAAGATGGTGG +
Preference number: 6 (lower is better)
Translates to: VSKVNFSGDHKLWLW*SDGFALSYFSRRWW
Trigger: CCACCATCTTCGGCTGAAGTAACTGAGGGCAAACCCATCAGACAACCAGAGCCATAATTTGTGGTCACCGCTGAAATTTACCTTGGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411957.1
CDS CAA 90 bp CCGCGTCCTTCAGAAGCTTCTTCTTGGCTTCTTCCAGACTTTCAATaGTTCCCAGGTCGTCATCTACTTTCTTCTTGGTATCAGCCAACT +
Preference number: 6 (lower is better)
Translates to: PRPSEASSWLLPDFQ*FPGRHLLSSWYQPT
Trigger: AGTTGGCTGATACCAAGAAGAAAGTAGATGACGACCTGGGAACAATTGAAAGTCTGGAAGAAGCCAAGAAGAAGCTTCTGAAGGACGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
ENST00000488329.1
CDS TCA 72 bp AGGGCTGTTGCGTGTCTTTGTCTCATGTCCTGGATTTaGGCTTCATGGTTCTTAGTTTCCTCCTCAAGAGCT +
Preference number: 6 (lower is better)
Translates to: RAVACLCLMSWI*ASWFLVSSSRA
Trigger: AGCTCTTGAGGAGGAAACTAAGAACCATGAAGCTCAAATCCAGGACATGAGACAAAGACACGCAACAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS TCA 72 bp CAGCAAGCAAACCCCATCTCACTCTCCCAGGGTTTTTaGATGCTCCCGAACATAACAAAGTCTGCTGAAACT +
Preference number: 6 (lower is better)
Translates to: QQANPISLSQGF*MLPNITKSAET
Trigger: AGTTTCAGCAGACTTTGTTATGTTCGGGAGCATTCAAAAACCCTGGGAGAGTGAGATGGGGTTTGCTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465458.1
CDS GCA 72 bp TGCCATATAGGTAAGGCAGTCAGCATACTTAGGCACTaGACAAGCCGGGAACTAACAGCCACACACTTATAT +
Preference number: 6 (lower is better)
Translates to: CHIGKAVSILRH*TSRELTATHLY
Trigger: ATATAAGTGTGTGGCTGTTAGTTCCCGGCTTGTGCAGTGCCTAAGTATGCTGACTGCCTTACCTATATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469865.1
CDS GCA 72 bp CAGCAGCACAAGCTTTGTGGAACAAATGACAGGAGATaGCATATAGGTAAGGCAGTCAGCATACTTAGGCAC +
Preference number: 6 (lower is better)
Translates to: QQHKLCGTNDRR*HIGKAVSILRH
Trigger: GTGCCTAAGTATGCTGACTGCCTTACCTATATGGCATCTCCTGTCATTTGTTCCACAAAGCTTGTGCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469865.1
CDS CCA 72 bp TGGATCCTCGAGTCCAGTTCTCTGCGCCATTGTAAATaGAACGATCCAAAAGCAATTGCCTCGAGTTTCCAA +
Preference number: 6 (lower is better)
Translates to: WILESSSLRHCK*NDPKAIASSFQ
Trigger: TTGGAAACTCGAGGCAATTGCTTTTGGATCGTTCCATTTACAATGGCGCAGAGAACTGGACTCGAGGATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411957.1
CDS CAA 72 bp GTAAATTTCAGCGGTGACCACAAATTATGGCTCTGGTaGTCTGATGGGTTTGCCCTCAGTTACTTCAGCCGA +
Preference number: 6 (lower is better)
Translates to: VNFSGDHKLWLW*SDGFALSYFSR
Trigger: TCGGCTGAAGTAACTGAGGGCAAACCCATCAGACAACCAGAGCCATAATTTGTGGTCACCGCTGAAATTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411957.1
CDS GCA 72 bp AAGAGATACCTCTCTGGATCCTCGAGTCCAGTTCTCTaGGCCATTGTAAATGGAACGATCCAAAAGCAATTG +
Preference number: 6 (lower is better)
Translates to: KRYLSGSSSPVL*AIVNGTIQKQL
Trigger: CAATTGCTTTTGGATCGTTCCATTTACAATGGCGCAGAGAACTGGACTCGAGGATCCAGAGAGGTATCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
ENST00000411957.1
CDS TCA 72 bp AAACCTCACTCGTTAGCAGGGAAAGAAAAGACACAGTaGAAGTGCAGCAGCACAAGCTTTGTGGAACAAATG +
Preference number: 6 (lower is better)
Translates to: KPHSLAGKEKTQ*KCSSTSFVEQM
Trigger: CATTTGTTCCACAAAGCTTGTGCTGCTGCACTTTCACTGTGTCTTTTCTTTCCCTGCTAACGAGTGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469865.1
CDS GCA 72 bp CCAAATGATTCCAGAATTGGATTTGCTTGCAAAAGCTaGCGTTCAAGTTCCCCCTGGTGTTTCACTGGTTTA +
Preference number: 6 (lower is better)
Translates to: PNDSRIGFACKS*RSSSPWCFTGL
Trigger: TAAACCAGTGAAACACCAGGGGGAACTTGAACGGCAGCTTTTGCAAGCAAATCCAATTCTGGAATCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360416.8
ENST00000379980.8
CDS GCA 72 bp ATCATCTTTGTTGACCATTGCTTTCTTTCCATTCTCTaGCAACTCCACCATAACTTCATCTCCCCGTTCTTC +
Preference number: 6 (lower is better)
Translates to: IIFVDHCFLSIL*QLHHNFISPFF
Trigger: GAAGAACGGGGAGATGAAGTTATGGTGGAGTTGGCAGAGAATGGAAAGAAAGCAATGGTCAACAAAGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
ENST00000411957.1
CDS CAA 72 bp TCGAGGTTTCTGAAACTTGGAGTGGGAACCTTGCTCTaGAACCAGTTTTTCAACAAAGGTTTTATCTGTGGC +
Preference number: 6 (lower is better)
Translates to: SRFLKLGVGTLL*NQFFNKGFICG
Trigger: GCCACAGATAAAACCTTTGTTGAAAAACTGGTTCAAGAGCAAGGTTCCCACTCCAAGTTTCAGAAACCTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CAA 90 bp CTTTCTTCCTCTAAGTGTGCCAGAACTCCAGCTCTGAAAAATATCTaGCTCTGTCCAATTCTGTACAAGTTTGGGTCCAATTCTAAAGCC +
Preference number: 6 (lower is better)
Translates to: LSSSKCARTPALKNI*LCPILYKFGSNSKA
Trigger: GGCTTTAGAATTGGACCCAAACTTGTACAGAATTGGACAGAGCAAGATATTTTTCAGAGCTGGAGTTCTGGCACACTTAGAGGAAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
CDS CAA 72 bp TCAGAAGCTTCTTCTTGGCTTCTTCCAGACTTTCAATaGTTCCCAGGTCGTCATCTACTTTCTTCTTGGTAT +
Preference number: 6 (lower is better)
Translates to: SEASSWLLPDFQ*FPGRHLLSSWY
Trigger: ATACCAAGAAGAAAGTAGATGACGACCTGGGAACAATTGAAAGTCTGGAAGAAGCCAAGAAGAAGCTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
ENST00000488329.1
CDS GCA 72 bp TTTAAGCGTTCTTCTAAATCTGAGATCATCACTTCTTaGTTATTCCTGATTTTGGCCAAGTTTTTCGCCTTT +
Preference number: 6 (lower is better)
Translates to: FKRSSKSEIITS*LFLILAKFFAF
Trigger: AAAGGCGAAAAACTTGGCCAAAATCAGGAATAAGCAAGAAGTGATGATCTCAGATTTAGAAGAACGCTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269243.8
ENST00000360416.8
ENST00000379980.8
ENST00000465458.1