RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYEF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000104177

Ensembl transcript IDs: ENST00000267836.10, ENST00000324324.12, ENST00000558289.5, ENST00000558395.1, ENST00000559057.1, ENST00000559862.5, ENST00000560157.1, ENST00000560172.5, ENST00000560513.1, ENST00000560530.5, ENST00000561151.1, ENST00000561301.5, ENST00000561351.5, ENST00000610570.4, ENST00000616409.4, ENST00000620867.4

Found 460 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGTGCCCAAATAAAACAGCGAACTTAATCAATAAATGTTCTGACTaGTCCACCGACCAGCCGCTCCCCATCTCTCTCCGTCGCCTCAGG +
Preference number: 1 (lower is better)
Translates to: PCPNKTANLINKCSD*STDQPLPISLRRLR
Trigger: CCTGAGGCGACGGAGAGAGATGGGGAGCGGCTGGTCGGTGGAGCAGTCAGAACATTTATTGATTAAGTTCGCTGTTTTATTTGGGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561151.1
3UTR CCA 90 bp TCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTaGCTGGCACTAATAGGCTGTCCACCCGGACCAAGTCCCATCCCA +
Preference number: 1 (lower is better)
Translates to: SPPGPKFPITPPMFN*LALIGCPPGPSPIP
Trigger: TGGGATGGGACTTGGTCCGGGTGGACAGCCTATTAGTGCCAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR TCA 90 bp GCGCCTGTCTTGCCAAAGCTATGGAGAGAAGTGAACAACAGCCACTaGTGGGCTGGGAAGATGAAGGTCAACCATTCATTCGTCGGCAAT +
Preference number: 1 (lower is better)
Translates to: APVLPKLWREVNNSH*WAGKMKVNHSFVGN
Trigger: ATTGCCGACGAATGAATGGTTGACCTTCATCTTCCCAGCCCATCAGTGGCTGTTGTTCACTTCTCTCCATAGCTTTGGCAAGACAGGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR GCA 90 bp CCCATATCAGGGACGTGTCCTCCTGGAAATGATCCTCCTGTTCGCTaGAATGCCCTACGAGCATTTTCTCCATCAGGATCCTCTTTAATA +
Preference number: 1 (lower is better)
Translates to: PISGTCPPGNDPPVR*NALRAFSPSGSSLI
Trigger: TATTAAAGAGGATCCTGATGGAGAAAATGCTCGTAGGGCATTGCAGCGAACAGGAGGATCATTTCCAGGAGGACACGTCCCTGATATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR CCA 90 bp CTCCTGTTGTCCATTAAAGCCACAACAGTTGACTTTTTCTTCTGCTaGGTTACTGCTCACCTTGCCTTGGTTAGAAGTGTTCATGGCCAC +
Preference number: 1 (lower is better)
Translates to: LLLSIKATTVDFFFC*VTAHLALVRSVHGH
Trigger: GTGGCCATGAACACTTCTAACCAAGGCAAGGTGAGCAGTAACCCAGCAGAAGAAAAAGTCAACTGTTGTGGCTTTAATGGACAACAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR GCA 90 bp CAACTCCTGTTGTCCATTAAAGCCACAACAGTTGACTTTTTCTTCTaGTGGGTTACTGCTCACCTTGCCTTGGTTAGAAGTGTTCATGGC +
Preference number: 1 (lower is better)
Translates to: QLLLSIKATTVDFFF*WVTAHLALVRSVHG
Trigger: GCCATGAACACTTCTAACCAAGGCAAGGTGAGCAGTAACCCAGCAGAAGAAAAAGTCAACTGTTGTGGCTTTAATGGACAACAGGAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR GCA 90 bp AGGTCTGTAAGAGAGGCTATTACAACAGCTGATGTGTTTACTAGGTaGCTAGACCAAGTGAAAGTGGTGGGAATAAATGAGAACAGATGT +
Preference number: 1 (lower is better)
Translates to: RSVREAITTADVFTR*LDQVKVVGINENRC
Trigger: ACATCTGTTCTCATTTATTCCCACCACTTTCACTTGGTCTAGGCACCTAGTAAACACATCAGCTGTTGTAATAGCCTCTCTTACAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR TCA 90 bp CAAGTGAAAGTGGTGGGAATAAATGAGAACAGATGTGAGACTATATaGAGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACA +
Preference number: 1 (lower is better)
Translates to: QVKVVGINENRCETI*RKHHQDYMGPEKGT
Trigger: TGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCTTCATATAGTCTCACATCTGTTCTCATTTATTCCCACCACTTTCACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR GCA 90 bp GTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTaGCTATTATCATACTTGGGGCTTGCTACATTATCAGTTCTATAT +
Preference number: 1 (lower is better)
Translates to: VHFNGWKLDRKLGIV*LLSYLGLATLSVLY
Trigger: ATATAGAACTGATAATGTAGCAAGCCCCAAGTATGATAATAGGCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
3UTR CCA 90 bp ATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTGGTATTCCATaGTTTATTAAAACTGCATTTATAAATGGATCAGCTCCTGCAGAA +
Preference number: 1 (lower is better)
Translates to: IVGSNVFDMLCLGIP*FIKTAFINGSAPAE
Trigger: TTCTGCAGGAGCTGATCCATTTATAAATGCAGTTTTAATAAACCATGGAATACCAAGGCACAACATATCAAACACATTGGATCCCACGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
3UTR CCA 90 bp ATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTGGTATTCCATaGTTTATTAAAACTGCATTTATAAATGGATCAGCTCCATGGCTT +
Preference number: 1 (lower is better)
Translates to: IVGSNVFDMLCLGIP*FIKTAFINGSAPWL
Trigger: AAGCCATGGAGCTGATCCATTTATAAATGCAGTTTTAATAAACCATGGAATACCAAGGCACAACATATCAAACACATTGGATCCCACGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560172.5
3UTR TCA 90 bp CTTAAGCAAAAAGTTACTGAAGACAATCCACAGGAGATGTCCAATTaGCACTTCATAAACACTATCTACAATATATTTAACGAATGGCCC +
Preference number: 1 (lower is better)
Translates to: LKQKVTEDNPQEMSN*HFINTIYNIFNEWP
Trigger: GGGCCATTCGTTAAATATATTGTAGATAGTGTTTATGAAGTGTCAATTGGACATCTCCTGTGGATTGTCTTCAGTAACTTTTTGCTTAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR TCA 90 bp TATGTTCAACTGGCTGGCACTAATAGGCTGTCCACCCGGACCAAGTCCCATCCCCAGTTCCAGCTATGCTaGACACTTCCTTTAGCTTCT +
Preference number: 2 (lower is better)
Translates to: YVQLAGTNRLSTRTKSHPQFQLC*TLPLAS
Trigger: AGAAGCTAAAGGAAGTGTTCAGCATAGCTGGAACTG...GGGATGGGACTTGGTCCGGGTGGACAGCCTATTAGTGCCAGCCAGTTGAACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR GCA 90 bp TACTCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTGGCTGCAAGTCCCATCCCAATaGCTCCAAGACCACGTGGTA +
Preference number: 2 (lower is better)
Translates to: YSPPGPKFPITPPMFNWLQVPSQ*LQDHVV
Trigger: TACCACGTGGTCTTGGAGGCATTGGGATGGGACTTG...CAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR TCA 90 bp TACTCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTGGCTGTTGCTTGCTCAAAAGTaGCAGTGCCCATTCCTCTGC +
Preference number: 2 (lower is better)
Translates to: YSPPGPKFPITPPMFNWLLLAQK*QCPFLC
Trigger: GCAGAGGAATGGGCACTGTCACTTTTGAGCAAGCAA...CAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR GCA 90 bp TACTCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTGGCTGGATCCTCCTGTTCGCTaGAATGCCCTACGAGCATTT +
Preference number: 2 (lower is better)
Translates to: YSPPGPKFPITPPMFNWLDPPVR*NALRAF
Trigger: AAATGCTCGTAGGGCATTGCAGCGAACAGGAGGATC...CAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR CAA 90 bp AAGCCACAACAGTTGACTTTTTCTTCTGCTGGGTTACTGCTCACCTaGCCTTGGTTAGAAGTGTTCATGGCCACAAAAGACTGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: KPQQLTFSSAGLLLT*PWLEVFMATKDWRR
Trigger: CCTTCTCCAGTCTTTTGTGGCCATGAACACTTCTAACCAAGGCAAGGTGAGCAGTAACCCAGCAGAAGAAAAAGTCAACTGTTGTGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR CCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCACAGCCACTGATGGGCTaGGAAGATGAAGGTCAACCA +
Preference number: 2 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSQPLMG*EDEGQP
Trigger: TGGTTGACCTTCATCTTCCCAGCCCATCAGTGGCTG...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR CAA 90 bp ACAACAGTTGACTTTTTCTTCTGCTGGGTTACTGCTCACCTTGCCTaGGTTAGAAGTGTTCATGGCCACAAAAGACTGGAGAAGGATGGT +
Preference number: 2 (lower is better)
Translates to: TTVDFFFCWVTAHLA*VRSVHGHKRLEKDG
Trigger: ACCATCCTTCTCCAGTCTTTTGTGGCCATGAACACTTCTAACCAAGGCAAGGTGAGCAGTAACCCAGCAGAAGAAAAAGTCAACTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR TCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCGTTATGCAGAAAATATaGATGGCAGGGAGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCVMQKI*MAGRGR
Trigger: TCTGCCCCTCCCTGCCATTCATATTTTCTGCATAAC...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
3UTR-3UTR TCA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGAGTGAACAACAGCCACTaGTGGGCTGGGAAGATGAAG +
Preference number: 2 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRVNNSH*WAGKMK
Trigger: CTTCATCTTCCCAGCCCATCAGTGGCTGTTGTTCAC...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR GCA 90 bp AGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACAAAGACACCTCCTCATACCAGACACAATTaGAAGTGTGTTGGTTGCAAG +
Preference number: 2 (lower is better)
Translates to: RKHHQDYMGPEKGTKTPPHTRHN*KCVGCK
Trigger: CTTGCAACCAACACACTTGCAATTGTGTCTGGTATG...AGGAGGTGTCTTTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR GCA 90 bp ACAAAGTATGGTCCAGGGACTCTTGAGGGTTCAATAGGTCAAAACTATTTAAGTCAAGTCCCATCCCAATaGCTCCAAGACCACGTGGTA +
Preference number: 2 (lower is better)
Translates to: TKYGPGTLEGSIGQNYLSQVPSQ*LQDHVV
Trigger: TACCACGTGGTCTTGGAGGCATTGGGATGGGACTTG...ACTTAAATAGTTTTGACCTATTGAACCCTCAAGAGTCCCTGGACCATACTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR CCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCTGCAGAAAATATGAATaGCAGGGAGGGGCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCCRKYE*QGGAER
Trigger: TCTCTCTGCCCCTCCCTGCCATTCATATTTTCTGCA...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
3UTR-3UTR CCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCGTAATCCCAGGATTTTaGGAGGCCGAGGCGGGTGGA +
Preference number: 2 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFVIPGF*EAEAGG
Trigger: TCCACCCGCCTCGGCCTCCCAAAATCCTGGGATTAC...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR TCA 90 bp AGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACAAAGACACCTCCTACCATTCATTTAAACTaGATGACCAGACTTGCTGTC +
Preference number: 2 (lower is better)
Translates to: RKHHQDYMGPEKGTKTPPTIHLN*MTRLAV
Trigger: GACAGCAAGTCTGGTCATTCAGTTTAAATGAATGGT...AGGAGGTGTCTTTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR TCA 90 bp AAACTGCCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAAGTGTCCTCCTGGAAATaGTCCTCCTGTTCGCTGCAA +
Preference number: 2 (lower is better)
Translates to: KLPIEHRNCLNCFNCLLKVSSWK*SSCSLQ
Trigger: TTGCAGCGAACAGGAGGATCATTTCCAGGAGGACAC...TTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGGCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR GCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAATAGAGCACAGTATGTaGATAGGAAGGAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSIEHSM*IGRKER
Trigger: CCTCTCCTTCCTTCCTATGCACATACTGTGCTCTAT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR GCA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGATTGCTGCGCCTGTCTTaGCAAAGCTATGGAGAGAAG +
Preference number: 2 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRLLRLS*QSYGEK
Trigger: CTTCTCTCCATAGCTTTGGCAAGACAGGCGCAGCAA...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR GCA 90 bp ACAAAGTATGGTCCAGGGACTCTTGAGGGTTCAATAGGTCAAAACTATTTAAGTTCCTGTTCGCTGCAATaGCCTACGAGCATTTTCTCC +
Preference number: 2 (lower is better)
Translates to: TKYGPGTLEGSIGQNYLSSCSLQ*PTSIFS
Trigger: GGAGAAAATGCTCGTAGGGCATTGCAGCGAACAGGA...ACTTAAATAGTTTTGACCTATTGAACCCTCAAGAGTCCCTGGACCATACTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR CCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGTGCAGAAAATATGAATaGCAGGGAGGGGCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLCRKYE*QGGAER
Trigger: TCTCTCTGCCCCTCCCTGCCATTCATATTTTCTGCA...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
3UTR-3UTR CCA 90 bp AGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACAAAGACACCTCCTAGCAGTTCACTTCAATaGCTGGAAACTAGACAGAAA +
Preference number: 2 (lower is better)
Translates to: RKHHQDYMGPEKGTKTPPSSSLQ*LETRQK
Trigger: TTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCT...AGGAGGTGTCTTTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR CCA 90 bp AGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACAAAGACACCTCCTCACTGTTATTTAGCCTaGGGTACAATTCAAGAGATC +
Preference number: 2 (lower is better)
Translates to: RKHHQDYMGPEKGTKTPPHCYLA*GTIQEI
Trigger: GATCTCTTGAATTGTACCCCAGGCTAAATAACAGTG...AGGAGGTGTCTTTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR CAA 90 bp CCGGCCTGCAAATTACTGATGACTTCAGGAGGAATGTTTGGATTATaGAGTATGGAAGGTGGTAAATTCATCAACCCTGATCCCATATCA +
Preference number: 2 (lower is better)
Translates to: PACKLLMTSGGMFGL*SMEGGKFINPDPIS
Trigger: TGATATGGGATCAGGGTTGATGAATTTACCACCTTCCATACTCAATAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGCCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR TCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAGGGATCCAATGTGTTTaGTATGTTGTGCCTTGGTAT +
Preference number: 2 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSGIQCV*YVVPWY
Trigger: ATACCAAGGCACAACATATCAAACACATTGGATCCC...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR GCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCATTAACTAGCTACTGCTaGTTGGCCATAATCCACTAC +
Preference number: 2 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSLTSYC*LAIIHY
Trigger: GTAGTGGATTATGGCCAAGCAGCAGTAGCTAGTTAA...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR GCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAGATGTGTTTACTAGGTaGCTAGACCAAGTGAAAGTG +
Preference number: 2 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSDVFTR*LDQVKV
Trigger: CACTTTCACTTGGTCTAGGCACCTAGTAAACACATC...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR GCA 90 bp AAACTGCCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAAGATCCTCCTGTTCGCTaGAATGCCCTACGAGCATTT +
Preference number: 2 (lower is better)
Translates to: KLPIEHRNCLNCFNCLLKDPPVR*NALRAF
Trigger: AAATGCTCGTAGGGCATTGCAGCGAACAGGAGGATC...TTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGGCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR GCA 90 bp ACAAAGTATGGTCCAGGGACTCTTGAGGGTTCAATAGGTCAAAACTATTTAAGTCAGTGCCCATTCCTCTaGTCTTGCCATCTTTGTCTT +
Preference number: 2 (lower is better)
Translates to: TKYGPGTLEGSIGQNYLSQCPFL*SCHLCL
Trigger: AAGACAAAGATGGCAAGAGCAGAGGAATGGGCACTG...ACTTAAATAGTTTTGACCTATTGAACCCTCAAGAGTCCCTGGACCATACTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR GCA 90 bp TACTCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTGGCTGTTGAACTGCTTCAATTaGTTGCTCAAAAGTGACAGT +
Preference number: 2 (lower is better)
Translates to: YSPPGPKFPITPPMFNWLLNCFN*LLKSDS
Trigger: ACTGTCACTTTTGAGCAAGCAATTGAAGCAGTTCAA...CAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR TCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAATTGCCAAAATGTGGTaGGGACAGATAGGAGATTTT +
Preference number: 2 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSIAKMW*GQIGDF
Trigger: AAAATCTCCTATCTGTCCTCACCACATTTTGGCAAT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR TCA 90 bp ACAAAGTATGGTCCAGGGACTCTTGAGGGTTCAATAGGTCAAAACTATTTAAGTCAGTTCCAGCTATGCTaGACACTTCCTTTAGCTTCT +
Preference number: 2 (lower is better)
Translates to: TKYGPGTLEGSIGQNYLSQFQLC*TLPLAS
Trigger: AGAAGCTAAAGGAAGTGTTCAGCATAGCTGGAACTG...ACTTAAATAGTTTTGACCTATTGAACCCTCAAGAGTCCCTGGACCATACTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR TCA 90 bp AAAGTGCTATGCCATAGCAGCTGTCTAATCATGAATCTTCAAAAGGGTTTCTTTGAACGGTACTCTTCATaGGGAACAGACTTGTCATCC +
Preference number: 2 (lower is better)
Translates to: KVLCHSSCLIMNLQKGFFERYSS*GTDLSS
Trigger: GGATGACAAGTCTGTTCCTCATGAAGAGTACCGTTC...AAAGAAACCCTTTTGAAGATTCATGATTAGACAGCTGCTATGGCATAGCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR GCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAAAGTTGGGAATAGTCTaGCTATTATCATACTTGGGG +
Preference number: 2 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSKLGIV*LLSYLG
Trigger: CCCCAAGTATGATAATAGGCAGACTATTCCCAACTT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR GCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAGTCATTAAAAATCTGTaGTACCTGGGTTACCCGAAT +
Preference number: 2 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSVIKNL*YLGYPN
Trigger: ATTCGGGTAACCCAGGTAGCACAGATTTTTAATGAC...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR GCA 90 bp AATGTAAAACACAGCTACACAGGTTATATACATTGCATAACTCCAGAGGACACCAAACTACTGCCTGTGTaGCAACATAACCCAGCTTGT +
Preference number: 2 (lower is better)
Translates to: NVKHSYTGYIHCITPEDTKLLPV*QHNPAC
Trigger: ACAAGCTGGGTTATGTTGGCACACAGGCAGTAGTTT...GGTGTCCTCTGGAGTTATGCAATGTATATAACCTGTGTAGCTGTGTTTTACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR GCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCAAATGCAGTCCTTGCTaGGCCTGTCTTGCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFKCSPC*ACLAKA
Trigger: AGCTTTGGCAAGACAGGCGCAGCAAGGACTGCATTT...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR GCA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGTCCTGTTCGCTGCAATaGCCTACGAGCATTTTCTCC +
Preference number: 2 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLESCSLQ*PTSIFS
Trigger: GGAGAAAATGCTCGTAGGGCATTGCAGCGAACAGGA...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR CCA 90 bp CCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAAAGTGACTGGCAACAAAAATTGTaGAACCAAGTCTACCGGCCT +
Preference number: 2 (lower is better)
Translates to: PIEHRNCLNCFNCLLKSDWQQKL*NQVYRP
Trigger: AGGCCGGTAGACTTGGTTCCACAATTTTTGTTGCCA...GTCACTTTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR TCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGACCATTCATTTAAACTaGATGACCAGACTTGCTGTC +
Preference number: 2 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLTIHLN*MTRLAV
Trigger: GACAGCAAGTCTGGTCATTCAGTTTAAATGAATGGT...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
3UTR-3UTR TCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCGTTATGCAGAAAATATaGATGGCAGGGAGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFVMQKI*MAGRGR
Trigger: TCTGCCCCTCCCTGCCATTCATATTTTCTGCATAAC...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR TCA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGAAGATGTGAGACTATATaGAGGAAGCATCACCAAGAC +
Preference number: 2 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRRCETI*RKHHQD
Trigger: GTCTTGGTGATGCTTCCTTCATATAGTCTCACATCT...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR TCA 90 bp ACAAAGTATGGTCCAGGGACTCTTGAGGGTTCAATAGGTCAAAACTATTTAAGTTGTTTTACCATCATGTaGACGGTACTCTTCATGAGG +
Preference number: 2 (lower is better)
Translates to: TKYGPGTLEGSIGQNYLSCFTIM*TVLFMR
Trigger: CCTCATGAAGAGTACCGTTCACATGATGGTAAAACA...ACTTAAATAGTTTTGACCTATTGAACCCTCAAGAGTCCCTGGACCATACTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR TCA 90 bp ACAAAGTATGGTCCAGGGACTCTTGAGGGTTCAATAGGTCAAAACTATTTAAGTTCTAAAAATGAACTGTaGGTTCTTCCAGGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: TKYGPGTLEGSIGQNYLSSKNEL*VLPGEQ
Trigger: CTGCTCACCTGGAAGAACTCACAGTTCATTTTTAGA...ACTTAAATAGTTTTGACCTATTGAACCCTCAAGAGTCCCTGGACCATACTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR GCA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGAGCAAAGCTGAATAACTaGAACAGAAATCACACAGCC +
Preference number: 2 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRAKLNN*NRNHTA
Trigger: GGCTGTGTGATTTCTGTTGCAGTTATTCAGCTTTGC...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR CAA 90 bp GGAAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTaGATATGTTGTGCCTTGGTATTCCATGGTTTATTAAAACTGCAT +
Preference number: 2 (lower is better)
Translates to: GKEIWLCLTSWDPMC*ICCALVFHGLLKLH
Trigger: ATGCAGTTTTAATAAACCATGGAATACCAAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
3UTR-3UTR TCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCCCCGAATTACCAGCCTaGTTCAAATATGTTGCTAGC +
Preference number: 2 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFPELPA*FKYVAS
Trigger: GCTAGCAACATATTTGAATCAGGCTGGTAATTCGGG...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR TCA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGACTACATTGGCAAAGCTaGATAACTGCAACAGAAATC +
Preference number: 2 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRLHWQS*ITATEI
Trigger: GATTTCTGTTGCAGTTATTCAGCTTTGCCAATGTAG...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR TCA 90 bp AATGTAAAACACAGCTACACAGGTTATATACATTGCATAACTCCAGAGGACACCGCATCATCAATATTATaGAGTGGAGACAACTGGAGT +
Preference number: 2 (lower is better)
Translates to: NVKHSYTGYIHCITPEDTASSIL*SGDNWS
Trigger: ACTCCAGTTGTCTCCACTTCATAATATTGATGATGC...GGTGTCCTCTGGAGTTATGCAATGTATATAACCTGTGTAGCTGTGTTTTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR GCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCATCATACTTGGGGCTTaGTACATTATCAGTTCTATA +
Preference number: 2 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCIILGA*YIISSI
Trigger: TATAGAACTGATAATGTAGCAAGCCCCAAGTATGAT...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
3UTR-3UTR CCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCATGCTCACTGCTTAACTaGATTGTATTTTATTTGGCT +
Preference number: 2 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSCSLLN*IVFYLA
Trigger: AGCCAAATAAAATACAATCCAGTTAAGCAGTGAGCA...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR CCA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGACTCAGAAAAAGGGGCTaGTTTGGAAGAAAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRLRKRG*FGRKKK
Trigger: TTTCTTCTTTCTTCCAAACCAGCCCCTTTTTCTGAG...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR CCA 90 bp AATGTAAAACACAGCTACACAGGTTATATACATTGCATAACTCCAGAGGACACCATCACCAAGACTATATaGGGCCAGAAAAAGGAACAA +
Preference number: 2 (lower is better)
Translates to: NVKHSYTGYIHCITPEDTITKTI*GQKKEQ
Trigger: TTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGAT...GGTGTCCTCTGGAGTTATGCAATGTATATAACCTGTGTAGCTGTGTTTTACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR CAA 90 bp AGGGTAGGTAGGTGTGAGAGTCTAAGGGTAAGGGAGAAAACTTGTTaGGATCAGAATGATTATGATAATGAGCCTCATAATTTAAAGTGT +
Preference number: 2 (lower is better)
Translates to: RVGRCESLRVREKTC*DQNDYDNEPHNLKC
Trigger: ACACTTTAAATTATGAGGCTCATTATCATAATCATTCTGATCCAAACAAGTTTTCTCCCTTACCCTTAGACTCTCACACCTACCTACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR TCA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGTGTTTTACCATCATGTaGACGGTACTCTTCATGAGG +
Preference number: 2 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLECFTIM*TVLFMR
Trigger: CCTCATGAAGAGTACCGTTCACATGATGGTAAAACA...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR CCA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGAAACTGCATTTATAAATaGATCAGCTCCTGCAGAAGT +
Preference number: 2 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRNCIYK*ISSCRS
Trigger: ACTTCTGCAGGAGCTGATCCATTTATAAATGCAGTT...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR TCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCCAGGAGATGTCCAATTaGCACTTCATAAACACTATC +
Preference number: 2 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFQEMSN*HFINTI
Trigger: GATAGTGTTTATGAAGTGTCAATTGGACATCTCCTG...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR TCA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGTCTTCCAACCAACTTTaGAGTCAAGATTGGCAACAA +
Preference number: 2 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLESSNQL*SQDWQQ
Trigger: TTGTTGCCAATCTTGACTTCAAAGTTGGTTGGAAGA...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR TCA 90 bp AAAGTGCTATGCCATAGCAGCTGTCTAATCATGAATCTTCAAAAGGGTTTCTTTAACATAGAAATTGCTTaGACTGCTTCAATTGCTTGC +
Preference number: 2 (lower is better)
Translates to: KVLCHSSCLIMNLQKGFFNIEIA*TASIAC
Trigger: GCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTT...AAAGAAACCCTTTTGAAGATTCATGATTAGACAGCTGCTATGGCATAGCACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR TCA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGGATTTTAGCTGCCTATaGTATGGTAGCATTTCAGCT +
Preference number: 2 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLEDFSCL*YGSISA
Trigger: AGCTGAAATGCTACCATATCATAGGCAGCTAAAATC...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR GCA 90 bp AATGTAAAACACAGCTACACAGGTTATATACATTGCATAACTCCAGAGGACACCTCATTCAATAGATACTaGCCAAAAGCTATCAACTCT +
Preference number: 2 (lower is better)
Translates to: NVKHSYTGYIHCITPEDTSFNRY*PKAINS
Trigger: AGAGTTGATAGCTTTTGGGCAGTATCTATTGAATGA...GGTGTCCTCTGGAGTTATGCAATGTATATAACCTGTGTAGCTGTGTTTTACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR CCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCAAGGAGCTCTATTTTTaGGAAAACAATGGGTGCTCA +
Preference number: 2 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFKELYF*ENNGCS
Trigger: TGAGCACCCATTGTTTTCCCAAAAATAGAGCTCCTT...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR CAA 90 bp TGGAAACTAGACAGAAAGTTGGGAATAGTCTGCCTATTATCATACTaGGGGCTTGCTACATTATCAGTTCTATATGAACTTGGAATTATT +
Preference number: 2 (lower is better)
Translates to: WKLDRKLGIVCLLSY*GLATLSVLYELGII
Trigger: AATAATTCCAAGTTCATATAGAACTGATAATGTAGCAAGCCCCAAGTATGATAATAGGCAGACTATTCCCAACTTTCTGTCTAGTTTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
3UTR CAA 90 bp GATTTAAGGCCCCAAATAAAGAAATGCGGAGTATCACATCTTACATaGTCTGCCCTAAAGTTTCAATTAGTTTCTTTTCACCAGCAATAT +
Preference number: 2 (lower is better)
Translates to: DLRPQIKKCGVSHLT*SALKFQLVSFHQQY
Trigger: ATATTGCTGGTGAAAAGAAACTAATTGAAACTTTAGGGCAGACAATGTAAGATGTGATACTCCGCATTTCTTTATTTGGGGCCTTAAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR CAA 90 bp TTCTATACCATATTCCAACAGGTCTGTGAGTTAACCTCATCACAATaGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCTTAATC +
Preference number: 2 (lower is better)
Translates to: FYTIFQQVCELTSSQ*LIEFFSLVCNFFLI
Trigger: GATTAAGAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAACTCACAGACCTGTTGGAATATGGTATAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR TCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCATAAGTAGCAGCTACTaGGGTCTTCATTCCATAAAT +
Preference number: 2 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFISSSY*GLHSIN
Trigger: ATTTATGGAATGAAGACCTCAGTAGCTGCTACTTAT...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR TCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCAATGTATTATGCCAATaGGCTGAGGCAGAAAATGTT +
Preference number: 2 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFNVLCQ*AEAENV
Trigger: AACATTTTCTGCCTCAGCTCATTGGCATAATACATT...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR GCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCAACCTTTTTCATGTCTaGAATATGGATATCCGCATT +
Preference number: 2 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFNLFHV*NMDIRI
Trigger: AATGCGGATATCCATATTGCAGACATGAAAAAGGTT...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR GCA 72 bp GGGACGTGTCCTCCTGGAAATGATCCTCCTGTTCGCTaGAATGCCCTACGAGCATTTTCTCCATCAGGATCC +
Preference number: 3 (lower is better)
Translates to: GTCPPGNDPPVR*NALRAFSPSGS
Trigger: GGATCCTGATGGAGAAAATGCTCGTAGGGCATTGCAGCGAACAGGAGGATCATTTCCAGGAGGACACGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR CCA 72 bp GGACCTAAATTTCCCATTACTCCACCTATGTTCAACTaGCTGGCACTAATAGGCTGTCCACCCGGACCAAGT +
Preference number: 3 (lower is better)
Translates to: GPKFPITPPMFN*LALIGCPPGPS
Trigger: ACTTGGTCCGGGTGGACAGCCTATTAGTGCCAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR CAA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAAGGCAGGAGAATTGTTaGAATCCAGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSRQENC*NPGGGG
Trigger: ACCTCCGCCTCCTGGATTCAAACAATTCTCCTGCCT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR TCA 72 bp TTGCCAAAGCTATGGAGAGAAGTGAACAACAGCCACTaGTGGGCTGGGAAGATGAAGGTCAACCATTCATTC +
Preference number: 3 (lower is better)
Translates to: LPKLWREVNNSH*WAGKMKVNHSF
Trigger: GAATGAATGGTTGACCTTCATCTTCCCAGCCCATCAGTGGCTGTTGTTCACTTCTCTCCATAGCTTTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR GCA 72 bp AATAAAACAGCGAACTTAATCAATAAATGTTCTGACTaGTCCACCGACCAGCCGCTCCCCATCTCTCTCCGT +
Preference number: 3 (lower is better)
Translates to: NKTANLINKCSD*STDQPLPISLR
Trigger: ACGGAGAGAGATGGGGAGCGGCTGGTCGGTGGAGCAGTCAGAACATTTATTGATTAAGTTCGCTGTTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561151.1
3UTR-3UTR CAA 90 bp TACTCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTGGCTGGATTGGCAACAAAAATaGTGGAACCAAGTCTACCGG +
Preference number: 3 (lower is better)
Translates to: YSPPGPKFPITPPMFNWLDWQQK*WNQVYR
Trigger: CCGGTAGACTTGGTTCCACAATTTTTGTTGCCAATC...CAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR TCA 72 bp TGTGGTTCACAAATGGGACAGATTGCCAAAATGTGGTaGGGACAGATAGGAGATTTTCACAGAGAAGGGAGC +
Preference number: 3 (lower is better)
Translates to: CGSQMGQIAKMW*GQIGDFHREGS
Trigger: GCTCCCTTCTCTGTGAAAATCTCCTATCTGTCCTCACCACATTTTGGCAATCTGTCCCATTTGTGAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR GCA 72 bp AGCGGTAGGGTACAGGAGGCATGGTTTAAAGTGCTATaGCATAGCAGCTGTCTAATCATGAATCTTCAAAAG +
Preference number: 3 (lower is better)
Translates to: SGRVQEAWFKVL*HSSCLIMNLQK
Trigger: CTTTTGAAGATTCATGATTAGACAGCTGCTATGGCATAGCACTTTAAACCATGCCTCCTGTACCCTACCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR CCA 72 bp CAGGAACAAGCATACCAGACACAATTGCAAGTGTGTTaGTTGCAAGAAAAGGTAAGAACTAGGTCCCTCAAG +
Preference number: 3 (lower is better)
Translates to: QEQAYQTQLQVC*LQEKVRTRSLK
Trigger: CTTGAGGGACCTAGTTCTTACCTTTTCTTGCAACCAACACACTTGCAATTGTGTCTGGTATGCTTGTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR CAA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGAAAAGAAATGCAGTCCTaGCTGCGCCTGTCTTGCCAA +
Preference number: 3 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRKEMQS*LRLSCQ
Trigger: TTGGCAAGACAGGCGCAGCAAGGACTGCATTTCTTT...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR TCA 72 bp CTACAAAGGTTAACCCAAATTAACTTACAGCAGAGGTaGACAAACTACTGCCTGTGTGCCAACATAACCCAG +
Preference number: 3 (lower is better)
Translates to: LQRLTQINLQQR*TNYCLCANITQ
Trigger: CTGGGTTATGTTGGCACACAGGCAGTAGTTTGTTCACCTCTGCTGTAAGTTAATTTGGGTTAACCTTTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR GCA 72 bp TTGTCCATTAAAGCCACAACAGTTGACTTTTTCTTCTaGTGGGTTACTGCTCACCTTGCCTTGGTTAGAAGT +
Preference number: 3 (lower is better)
Translates to: LSIKATTVDFFF*WVTAHLALVRS
Trigger: ACTTCTAACCAAGGCAAGGTGAGCAGTAACCCAGCAGAAGAAAAAGTCAACTGTTGTGGCTTTAATGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR CAA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCCTTGCTGCGCCTGTCTaGCCAAAGCTATGGAGAGAA +
Preference number: 3 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFLAAPV*PKLWRE
Trigger: TTCTCTCCATAGCTTTGGCAAGACAGGCGCAGCAAG...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR CAA 90 bp TACTCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTGGCTGCCACTAAGATCATATTaGTTCATAGTTTCTAGGGCT +
Preference number: 3 (lower is better)
Translates to: YSPPGPKFPITPPMFNWLPLRSY*FIVSRA
Trigger: AGCCCTAGAAACTATGAACAAATATGATCTTAGTGG...CAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR CAA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGAGCATACCAGACACAATaGCAAGTGTGTTGGTTGCAA +
Preference number: 3 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRAYQTQ*QVCWLQ
Trigger: TTGCAACCAACACACTTGCAATTGTGTCTGGTATGC...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR CAA 90 bp CCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAAAGTGACGATTGGCAACAAAAATaGTGGAACCAAGTCTACCGG +
Preference number: 3 (lower is better)
Translates to: PIEHRNCLNCFNCLLKSDDWQQK*WNQVYR
Trigger: CCGGTAGACTTGGTTCCACAATTTTTGTTGCCAATC...GTCACTTTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR CAA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCATATCATACTTGGGGCTaGCTACATTATCAGTTCTAT +
Preference number: 3 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSYHTWG*LHYQFY
Trigger: ATAGAACTGATAATGTAGCAAGCCCCAAGTATGATA...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR TCA 72 bp TGTGGTGTTTTACCATCATGTGAACGGTACTCTTCATaGGGAACAGACTTGTCATCCATTTTCACATGCATA +
Preference number: 3 (lower is better)
Translates to: CGVLPSCERYSS*GTDLSSIFTCI
Trigger: TATGCATGTGAAAATGGATGACAAGTCTGTTCCTCATGAAGAGTACCGTTCACATGATGGTAAAACACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR GCA 72 bp AATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTaGCTATTATCATACTTGGGGCTTGCTACATTATCA +
Preference number: 3 (lower is better)
Translates to: NGWKLDRKLGIV*LLSYLGLATLS
Trigger: TGATAATGTAGCAAGCCCCAAGTATGATAATAGGCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
3UTR-3UTR CAA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGAACAATTGCAAGTGTGTaGGTTGCAAGAAAAGGTAAG +
Preference number: 3 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRTIASV*VARKGK
Trigger: CTTACCTTTTCTTGCAACCAACACACTTGCAATTGT...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR CAA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCCAAGGAGCTCTATTTTaGGGAAAACAATGGGTGCTC +
Preference number: 3 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFQGALF*GKQWVL
Trigger: GAGCACCCATTGTTTTCCCAAAAATAGAGCTCCTTG...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR CAA 90 bp ACAAAGTATGGTCCAGGGACTCTTGAGGGTTCAATAGGTCAAAACTATTTAAGTTTCTTCCAACCAACTTaGAAGTCAAGATTGGCAACA +
Preference number: 3 (lower is better)
Translates to: TKYGPGTLEGSIGQNYLSFFQPT*KSRLAT
Trigger: TGTTGCCAATCTTGACTTCAAAGTTGGTTGGAAGAA...ACTTAAATAGTTTTGACCTATTGAACCCTCAAGAGTCCCTGGACCATACTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR GCA 72 bp ATTAACCAATATATTATAAAGAAATGCAGTCCTTGCTaGGCCTGTCTTGCCAAAGCTATGGAGAGAAGTGAA +
Preference number: 3 (lower is better)
Translates to: INQYIIKKCSPC*ACLAKAMERSE
Trigger: TTCACTTCTCTCCATAGCTTTGGCAAGACAGGCGCAGCAAGGACTGCATTTCTTTATAATATATTGGTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR CAA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGAAAACTAGACAGAAAGTaGGGAATAGTCTGCCTATTA +
Preference number: 3 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRKLDRK*GIVCLL
Trigger: TAATAGGCAGACTATTCCCAACTTTCTGTCTAGTTT...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR-3UTR CAA 90 bp GCCTGCAAATTACTGATGACTTCAGGAGGAATGTTTGGATTATTGAGTATGGAACCACTAAGATCATATTaGTTCATAGTTTCTAGGGCT +
Preference number: 3 (lower is better)
Translates to: ACKLLMTSGGMFGLLSMEPLRSY*FIVSRA
Trigger: AGCCCTAGAAACTATGAACAAATATGATCTTAGTGG...TTCCATACTCAATAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR CAA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGTTCTTCCAACCAACTTaGAAGTCAAGATTGGCAACA +
Preference number: 3 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLEFFQPT*KSRLAT
Trigger: TGTTGCCAATCTTGACTTCAAAGTTGGTTGGAAGAA...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR-3UTR CAA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGGAACATAGAAATTGCTaGAACTGCTTCAATTGCTTG +
Preference number: 3 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLEEHRNC*NCFNCL
Trigger: CAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTC...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
3UTR GCA 72 bp TCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTaGCTTGGTATTCCATGGTTTATTAAAACTGCATTT +
Preference number: 3 (lower is better)
Translates to: SNIVGSNVFDML*LGIPWFIKTAF
Trigger: AAATGCAGTTTTAATAAACCATGGAATACCAAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
3UTR CCA 72 bp AACTACTTTGTGATAACCTTTTTCATGTCTGCAATATaGATATCCGCATTTACATATATCCTGGTTTGGATG +
Preference number: 3 (lower is better)
Translates to: NYFVITFFMSAI*ISAFTYILVWM
Trigger: CATCCAAACCAGGATATATGTAAATGCGGATATCCATATTGCAGACATGAAAAAGGTTATCACAAAGTAGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp CCCCATCTCTCTCCGTCGCCTCAGGCCTCCCTCTTTAATATTAAGGGGTCTTCCCTCGGCCGCCTGAGCTaGGGGGCTCCGAGCGCGACA +
Preference number: 4 (lower is better)
Translates to: PHLSPSPQASLFNIKGSSLGRLS*GAPSAT
Trigger: TGTCGCGCTCGGAGCCCCTCAGCTCAGGCGGCCGAG...GGAAGACCCCTTAATATTAAAGAGGGAGGCCTGAGGCGACGGAGAGAGATGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS-3UTR TCA 90 bp TATGTTCAACTGGCTGGCACTAATAGGCTGTCCACCCGGACCAAGTCCCATCCCCTCGGCCGCCTGAGCTaGGGGGCTCCGAGCGCGACA +
Preference number: 4 (lower is better)
Translates to: YVQLAGTNRLSTRTKSHPLGRLS*GAPSAT
Trigger: TGTCGCGCTCGGAGCCCCTCAGCTCAGGCGGCCGAG...GGGATGGGACTTGGTCCGGGTGGACAGCCTATTAGTGCCAGCCAGTTGAACATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp CCCCATCTCTCTCCGTCGCCTCAGGCCTCCCTCTTTAATATTAAGGGGTCTTCCCGCGACAATGGCGGCTaGCGGGGAAGCGGTAACGGA +
Preference number: 4 (lower is better)
Translates to: PHLSPSPQASLFNIKGSSRDNGG*RGSGNG
Trigger: TCCGTTACCGCTTCCCCGGCAGCCGCCATTGTCGCG...GGAAGACCCCTTAATATTAAAGAGGGAGGCCTGAGGCGACGGAGAGAGATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS-3UTR GCA 90 bp CATCTCTCTCCGTCGCCTCAGGCCTCCCTCTTTAATATTAAGGGGTCTTCCACTCTGTGCTGCGGCTGCTaGTTCTCCGCCTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: HLSPSPQASLFNIKGSSTLCCGC*FSASAG
Trigger: CCCCGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAG...AGTGGAAGACCCCTTAATATTAAAGAGGGAGGCCTGAGGCGACGGAGAGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS-3UTR CCA 90 bp TCTCCGTCGCCTCAGGCCTCCCTCTTTAATATTAAGGGGTCTTCCACTAAGATCGGCTGTCGCCACCAGTaGCCCCGGGCACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: SPSPQASLFNIKGSSTKIGCRHQ*PRAPRP
Trigger: AGGCCGAGGTGCCCGGGGCCACTGGTGGCGACAGCC...GATCTTAGTGGAAGACCCCTTAATATTAAAGAGGGAGGCCTGAGGCGACGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS-3UTR GCA 90 bp TCTCTCCGTCGCCTCAGGCCTCCCTCTTTAATATTAAGGGGTCTTCCACTAAGATCTGCGGGCTGCAGGTaGGGGCTGTCGCCACCAGTG +
Preference number: 4 (lower is better)
Translates to: SLRRLRPPSLILRGLPLRSAGCR*GLSPPV
Trigger: CACTGGTGGCGACAGCCCGCACCTGCAGCCCGCAGA...TCTTAGTGGAAGACCCCTTAATATTAAAGAGGGAGGCCTGAGGCGACGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS-3UTR GCA 90 bp TATGTTCAACTGGCTGGCACTAATAGGCTGTCCACCCGGACCAAGTCCCATCCCTTGGAGCTGCTGCTGTaGTGCGGCTGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: YVQLAGTNRLSTRTKSHPLELLL*CGCCFS
Trigger: GGAGAAGCAGCAGCCGCAGCACAGCAGCAGCTCCAA...GGGATGGGACTTGGTCCGGGTGGACAGCCTATTAGTGCCAGCCAGTTGAACATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CCA 90 bp TACTCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTGGCTGGGCTGTCGCCACCAGTaGCCCCGGGCACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: YSPPGPKFPITPPMFNWLGCRHQ*PRAPRP
Trigger: AGGCCGAGGTGCCCGGGGCCACTGGTGGCGACAGCC...CAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp CCAAGTCTACCGGCCTGCAAATTACTGATGACTTCAGGAGGAATGTTTGGATTACTGTGCTGCGGCTGCTaGTTCTCCGCCTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: PSLPACKLLMTSGGMFGLLCCGC*FSASAG
Trigger: CCCCGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAG...TAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGCCGGTAGACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR TCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCTCGGCCGCCTGAGCTaGGGGGCTCCGAGCGCGACA +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLLGRLS*GAPSAT
Trigger: TGTCGCGCTCGGAGCCCCTCAGCTCAGGCGGCCGAG...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCCTGTGCTGCGGCTGCTaGTTCTCCGCCTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCLCCGC*FSASAG
Trigger: CCCCGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAG...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp TCTCTCCGTCGCCTCAGGCCTCCCTCTTTAATATTAAGGGGTCTTCCACTAAGATTGGAGCTGCTGCTGTaGTGCGGCTGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLRRLRPPSLILRGLPLRLELLL*CGCCFS
Trigger: GGAGAAGCAGCAGCCGCAGCACAGCAGCAGCTCCAA...TCTTAGTGGAAGACCCCTTAATATTAAAGAGGGAGGCCTGAGGCGACGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS-3UTR CCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGGGCTGTCGCCACCAGTaGCCCCGGGCACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLGCRHQ*PRAPRP
Trigger: AGGCCGAGGTGCCCGGGGCCACTGGTGGCGACAGCC...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR TCA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGACTCGGCCGCCTGAGCTaGGGGGCTCCGAGCGCGACA +
Preference number: 4 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRLGRLS*GAPSAT
Trigger: TGTCGCGCTCGGAGCCCCTCAGCTCAGGCGGCCGAG...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTCTGTGCTGCGGCTGCTaGTTCTCCGCCTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLLCCGC*FSASAG
Trigger: CCCCGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAG...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp TATGTTCAACTGGCTGGCACTAATAGGCTGTCCACCCGGACCAAGTCCCATCCCTCCTGTTCGCTGCAATaGCCTACGAGCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: YVQLAGTNRLSTRTKSHPSCSLQ*PTSIFS
Trigger: GGAGAAAATGCTCGTAGGGCATTGCAGCGAACAGGA...GGGATGGGACTTGGTCCGGGTGGACAGCCTATTAGTGCCAGCCAGTTGAACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CCA 90 bp AATGTAAAACACAGCTACACAGGTTATATACATTGCATAACTCCAGAGGACACCGGCTGTCGCCACCAGTaGCCCCGGGCACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: NVKHSYTGYIHCITPEDTGCRHQ*PRAPRP
Trigger: AGGCCGAGGTGCCCGGGGCCACTGGTGGCGACAGCC...GGTGTCCTCTGGAGTTATGCAATGTATATAACCTGTGTAGCTGTGTTTTACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCCGCGACAATGGCGGCTaGCGGGGAAGCGGTAACGGA +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCRDNGG*RGSGNG
Trigger: TCCGTTACCGCTTCCCCGGCAGCCGCCATTGTCGCG...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267836.10
CDS-3UTR GCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTTCTGCGGGCTGCAGGTaGGGGCTGTCGCCACCAGTG +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLSAGCR*GLSPPV
Trigger: CACTGGTGGCGACAGCCCGCACCTGCAGCCCGCAGA...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCTGCTGTGCTGCGGCTaGTGCTTCTCCGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLLLCCG*CFSASA
Trigger: CGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAGCAG...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp CCAAGTCTACCGGCCTGCAAATTACTGATGACTTCAGGAGGAATGTTTGGATTACGCCATTGGAGCTGCTaGTGTGCTGCGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSLPACKLLMTSGGMFGLRHWSC*CAAAAA
Trigger: AGCAGCAGCCGCAGCACAGCAGCAGCTCCAATGGCG...TAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGCCGGTAGACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CCA 90 bp AAAGTGCTATGCCATAGCAGCTGTCTAATCATGAATCTTCAAAAGGGTTTCTTTGGCTGTCGCCACCAGTaGCCCCGGGCACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: KVLCHSSCLIMNLQKGFFGCRHQ*PRAPRP
Trigger: AGGCCGAGGTGCCCGGGGCCACTGGTGGCGACAGCC...AAAGAAACCCTTTTGAAGATTCATGATTAGACAGCTGCTATGGCATAGCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CCA 90 bp TATGTTCAACTGGCTGGCACTAATAGGCTGTCCACCCGGACCAAGTCCCATCCCCCACCTATGTTCAACTaGCTGGCACTAATAGGCTGT +
Preference number: 4 (lower is better)
Translates to: YVQLAGTNRLSTRTKSHPPPMFN*LALIGC
Trigger: ACAGCCTATTAGTGCCAGCCAGTTGAACATAGGTGG...GGGATGGGACTTGGTCCGGGTGGACAGCCTATTAGTGCCAGCCAGTTGAACATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp ACAAAGTATGGTCCAGGGACTCTTGAGGGTTCAATAGGTCAAAACTATTTAAGTTCTGCGGGCTGCAGGTaGGGGCTGTCGCCACCAGTG +
Preference number: 4 (lower is better)
Translates to: TKYGPGTLEGSIGQNYLSSAGCR*GLSPPV
Trigger: CACTGGTGGCGACAGCCCGCACCTGCAGCCCGCAGA...ACTTAAATAGTTTTGACCTATTGAACCCTCAAGAGTCCCTGGACCATACTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp AATGTAAAACACAGCTACACAGGTTATATACATTGCATAACTCCAGAGGACACCCTGCTGTGCTGCGGCTaGTGCTTCTCCGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: NVKHSYTGYIHCITPEDTLLCCG*CFSASA
Trigger: CGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAGCAG...GGTGTCCTCTGGAGTTATGCAATGTATATAACCTGTGTAGCTGTGTTTTACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp CACCATCAACCGTGCCCAAATAAAACAGCGAACTTAATCAATAAATGTTCTGACCTGCTGTGCTGCGGCTaGTGCTTCTCCGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: HHQPCPNKTANLINKCSDLLCCG*CFSASA
Trigger: CGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAGCAG...GTCAGAACATTTATTGATTAAGTTCGCTGTTTTATTTGGGCACGGTTGATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS-3UTR GCA 90 bp CCAAGTCTACCGGCCTGCAAATTACTGATGACTTCAGGAGGAATGTTTGGATTATTGGAGCTGCTGCTGTaGTGCGGCTGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PSLPACKLLMTSGGMFGLLELLL*CGCCFS
Trigger: GGAGAAGCAGCAGCCGCAGCACAGCAGCAGCTCCAA...TAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGCCGGTAGACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAGCAGTGAGCCGAGATTaGGCCACGGCACTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSAVSRD*ATALQQ
Trigger: CTGCTGGAGTGCCGTGGCGCAATCTCGGCTCACTGC...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp AAACTGCCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAACTGCTGTGCTGCGGCTaGTGCTTCTCCGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: KLPIEHRNCLNCFNCLLKLLCCG*CFSASA
Trigger: CGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAGCAG...TTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGGCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTCGCCATTGGAGCTGCTaGTGTGCTGCGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLRHWSC*CAAAAA
Trigger: AGCAGCAGCCGCAGCACAGCAGCAGCTCCAATGGCG...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp GGGCACCATCAACCGTGCCCAAATAAAACAGCGAACTTAATCAATAAATGTTCTCGCCATTGGAGCTGCTaGTGTGCTGCGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GHHQPCPNKTANLINKCSRHWSC*CAAAAA
Trigger: AGCAGCAGCCGCAGCACAGCAGCAGCTCCAATGGCG...AGAACATTTATTGATTAAGTTCGCTGTTTTATTTGGGCACGGTTGATGGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS-3UTR TCA 90 bp TACTCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTGGCTGGTGTCCTCCTGGAAATaGTCCTCCTGTTCGCTGCAA +
Preference number: 4 (lower is better)
Translates to: YSPPGPKFPITPPMFNWLVSSWK*SSCSLQ
Trigger: TTGCAGCGAACAGGAGGATCATTTCCAGGAGGACAC...CAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGCTGCTGTGCTGCGGCTaGTGCTTCTCCGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLELLCCG*CFSASA
Trigger: CGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAGCAG...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTTTGGAGCTGCTGCTGTaGTGCGGCTGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLLELLL*CGCCFS
Trigger: GGAGAAGCAGCAGCCGCAGCACAGCAGCAGCTCCAA...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGCGCCATTGGAGCTGCTaGTGTGCTGCGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLRHWSC*CAAAAA
Trigger: AGCAGCAGCCGCAGCACAGCAGCAGCTCCAATGGCG...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp TATGTTCAACTGGCTGGCACTAATAGGCTGTCCACCCGGACCAAGTCCCATCCCTGGTTTAAAGTGCTATaGCATAGCAGCTGTCTAATC +
Preference number: 4 (lower is better)
Translates to: YVQLAGTNRLSTRTKSHPWFKVL*HSSCLI
Trigger: GATTAGACAGCTGCTATGGCATAGCACTTTAAACCA...GGGATGGGACTTGGTCCGGGTGGACAGCCTATTAGTGCCAGCCAGTTGAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR TCA 90 bp TATGTTCAACTGGCTGGCACTAATAGGCTGTCCACCCGGACCAAGTCCCATCCCGTGACTACAGCATCTTaGCAAAATAGGAATCTGATA +
Preference number: 4 (lower is better)
Translates to: YVQLAGTNRLSTRTKSHPVTTAS*QNRNLI
Trigger: TATCAGATTCCTATTTTGTCAAGATGCTGTAGTCAC...GGGATGGGACTTGGTCCGGGTGGACAGCCTATTAGTGCCAGCCAGTTGAACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR TCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCGTGTCCTCCTGGAAATaGTCCTCCTGTTCGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCVSSWK*SSCSLQ
Trigger: TTGCAGCGAACAGGAGGATCATTTCCAGGAGGACAC...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR TCA 90 bp TACTCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTGGCTGGAACGGTACTCTTCATaGGGAACAGACTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: YSPPGPKFPITPPMFNWLERYSS*GTDLSS
Trigger: GGATGACAAGTCTGTTCCTCATGAAGAGTACCGTTC...CAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGCGCCATTGGAGCTGCTaGTGTGCTGCGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLERHWSC*CAAAAA
Trigger: AGCAGCAGCCGCAGCACAGCAGCAGCTCCAATGGCG...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCCAAGTCCCATCCCAATaGCTCCAAGACCACGTGGTA +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCQVPSQ*LQDHVV
Trigger: TACCACGTGGTCTTGGAGGCATTGGGATGGGACTTG...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp AGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACAAAGACACCTCCTCTAGGTCCCTCAAGCTaGAATGGTCATTCTACAAGG +
Preference number: 4 (lower is better)
Translates to: RKHHQDYMGPEKGTKTPPLGPSS*NGHSTR
Trigger: CCTTGTAGAATGACCATTGCAGCTTGAGGGACCTAG...AGGAGGTGTCTTTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp TATGTTCAACTGGCTGGCACTAATAGGCTGTCCACCCGGACCAAGTCCCATCCCCCATTTCATGTCATATaGGATGTTGCTAATGAAAAC +
Preference number: 4 (lower is better)
Translates to: YVQLAGTNRLSTRTKSHPPFHVI*DVANEN
Trigger: GTTTTCATTAGCAACATCCCATATGACATGAAATGG...GGGATGGGACTTGGTCCGGGTGGACAGCCTATTAGTGCCAGCCAGTTGAACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CCA 90 bp AGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACAAAGACACCTCCTCCATTCTATCAAAGCTaGAACTCATCCGGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: RKHHQDYMGPEKGTKTPPPFYQS*NSSGPV
Trigger: GACTGGACCGGATGAGTTCCAGCTTTGATAGAATGG...AGGAGGTGTCTTTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCTTGGAGCTGCTGCTGTaGTGCGGCTGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFLELLL*CGCCFS
Trigger: GGAGAAGCAGCAGCCGCAGCACAGCAGCAGCTCCAA...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCGATCCTCCTGTTCGCTaGAATGCCCTACGAGCATTT +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCDPPVR*NALRAF
Trigger: AAATGCTCGTAGGGCATTGCAGCGAACAGGAGGATC...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAGATCCTCCTGTTCGCTaGAATGCCCTACGAGCATTT +
Preference number: 4 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSDPPVR*NALRAF
Trigger: AAATGCTCGTAGGGCATTGCAGCGAACAGGAGGATC...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCAAGTCCCATCCCAATaGCTCCAAGACCACGTGGTA +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLQVPSQ*LQDHVV
Trigger: TACCACGTGGTCTTGGAGGCATTGGGATGGGACTTG...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAAAATGCAGTCCTTGCTaGGCCTGTCTTGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSKCSPC*ACLAKA
Trigger: AGCTTTGGCAAGACAGGCGCAGCAAGGACTGCATTT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGGTGTCCTCCTGGAAATaGTCCTCCTGTTCGCTGCAA +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLVSSWK*SSCSLQ
Trigger: TTGCAGCGAACAGGAGGATCATTTCCAGGAGGACAC...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR TCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTTTGCTTGCTCAAAAGTaGCAGTGCCCATTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLLLAQK*QCPFLC
Trigger: GCAGAGGAATGGGCACTGTCACTTTTGAGCAAGCAA...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR TCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCGAACGGTACTCTTCATaGGGAACAGACTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCERYSS*GTDLSS
Trigger: GGATGACAAGTCTGTTCCTCATGAAGAGTACCGTTC...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR TCA 90 bp AGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACAAAGACACCTCCTTGTTTTACCATCATGTaGACGGTACTCTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: RKHHQDYMGPEKGTKTPPCFTIM*TVLFMR
Trigger: CCTCATGAAGAGTACCGTTCACATGATGGTAAAACA...AGGAGGTGTCTTTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp TACTCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTGGCTGTGTTTTACCATCATGTaGACGGTACTCTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: YSPPGPKFPITPPMFNWLCFTIM*TVLFMR
Trigger: CCTCATGAAGAGTACCGTTCACATGATGGTAAAACA...CAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR TCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTCTGGGGAGTCAAATCTaGCTGTTCCACAGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLLGSQI*LFHSLL
Trigger: CAAAAGGCTGTGGAACAGTCAGATTTGACTCCCCAG...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR TCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCTGGGGAGTCAAATCTaGCTGTTCCACAGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLLGSQI*LFHSLL
Trigger: CAAAAGGCTGTGGAACAGTCAGATTTGACTCCCCAG...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR TCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCGCAGGCTTTTTCAGCTaGTTCTGGGGAGTCAAATCT +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCAGFFS*FWGVKS
Trigger: AGATTTGACTCCCCAGAATCAGCTGAAAAAGCCTGC...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR TCA 90 bp AGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACAAAGACACCTCCTGGGATCCAATGTGTTTaGTATGTTGTGCCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: RKHHQDYMGPEKGTKTPPGIQCV*YVVPWY
Trigger: ATACCAAGGCACAACATATCAAACACATTGGATCCC...AGGAGGTGTCTTTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp TCTCCGTCGCCTCAGGCCTCCCTCTTTAATATTAAGGGGTCTTCCACTAAGATCTGTTATGGTGATCTGTaGTCAGTGATCTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: SPSPQASLFNIKGSSTKICYGDL*SVIFDV
Trigger: AACATCAAAGATCACTGATCACAGATCACCATAACA...GATCTTAGTGGAAGACCCCTTAATATTAAAGAGGGAGGCCTGAGGCGACGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS-3UTR GCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTTCCTGTTCGCTGCAATaGCCTACGAGCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLSCSLQ*PTSIFS
Trigger: GGAGAAAATGCTCGTAGGGCATTGCAGCGAACAGGA...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCCAGTGCCCATTCCTCTaGTCTTGCCATCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCQCPFL*SCHLCL
Trigger: AAGACAAAGATGGCAAGAGCAGAGGAATGGGCACTG...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp GCCTGCAAATTACTGATGACTTCAGGAGGAATGTTTGGATTATTGAGTATGGAACAAGTCCCATCCCAATaGCTCCAAGACCACGTGGTA +
Preference number: 4 (lower is better)
Translates to: ACKLLMTSGGMFGLLSMEQVPSQ*LQDHVV
Trigger: TACCACGTGGTCTTGGAGGCATTGGGATGGGACTTG...TTCCATACTCAATAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp AGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACAAAGACACCTCCTGATGTGTTTACTAGGTaGCTAGACCAAGTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: RKHHQDYMGPEKGTKTPPDVFTR*LDQVKV
Trigger: CACTTTCACTTGGTCTAGGCACCTAGTAAACACATC...AGGAGGTGTCTTTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCACCACCTATGTTCAACTaGCTGGCACTAATAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSPPMFN*LALIGC
Trigger: ACAGCCTATTAGTGCCAGCCAGTTGAACATAGGTGG...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCCATTCCTCCAAAACCTaGACCATCCATTCCCATACC +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCHSSKT*TIHSHT
Trigger: GGTATGGGAATGGATGGTCCAGGTTTTGGAGGAATG...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGCAGCCACTGATGGGCTaGGAAGATGAAGGTCAACCA +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLQPLMG*EDEGQP
Trigger: TGGTTGACCTTCATCTTCCCAGCCCATCAGTGGCTG...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp TACTCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTGGCTGTCTTCCAACCAACTTTaGAGTCAAGATTGGCAACAA +
Preference number: 4 (lower is better)
Translates to: YSPPGPKFPITPPMFNWLSSNQL*SQDWQQ
Trigger: TTGTTGCCAATCTTGACTTCAAAGTTGGTTGGAAGA...CAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR TCA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGATTGCTTGCTCAAAAGTaGCAGTGCCCATTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRLLAQK*QCPFLC
Trigger: GCAGAGGAATGGGCACTGTCACTTTTGAGCAAGCAA...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp GCCTGCAAATTACTGATGACTTCAGGAGGAATGTTTGGATTATTGAGTATGGAATTGCTTGCTCAAAAGTaGCAGTGCCCATTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ACKLLMTSGGMFGLLSMELLAQK*QCPFLC
Trigger: GCAGAGGAATGGGCACTGTCACTTTTGAGCAAGCAA...TTCCATACTCAATAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR TCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGGAACGGTACTCTTCATaGGGAACAGACTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLERYSS*GTDLSS
Trigger: GGATGACAAGTCTGTTCCTCATGAAGAGTACCGTTC...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR TCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGCTGGGGAGTCAAATCTaGCTGTTCCACAGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLLGSQI*LFHSLL
Trigger: CAAAAGGCTGTGGAACAGTCAGATTTGACTCCCCAG...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR TCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGGCAGGCTTTTTCAGCTaGTTCTGGGGAGTCAAATCT +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLAGFFS*FWGVKS
Trigger: AGATTTGACTCCCCAGAATCAGCTGAAAAAGCCTGC...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR TCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTGCAGGCTTTTTCAGCTaGTTCTGGGGAGTCAAATCT +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLAGFFS*FWGVKS
Trigger: AGATTTGACTCCCCAGAATCAGCTGAAAAAGCCTGC...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR TCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGGATGGGCTGGGAAGATaGAGGTCAACCATTCATTCG +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLDGLGR*RSTIHS
Trigger: CGAATGAATGGTTGACCTTCATCTTCCCAGCCCATC...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGAGCTATGGAGAGAAGTaGACAACAGCCACTGATGGG +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLSYGEK*TTATDG
Trigger: CCCATCAGTGGCTGTTGTTCACTTCTCTCCATAGCT...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp TACTCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTGGCTGGATTTTAGCTGCCTATaGTATGGTAGCATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: YSPPGPKFPITPPMFNWLDFSCL*YGSISA
Trigger: AGCTGAAATGCTACCATATCATAGGCAGCTAAAATC...CAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTCCTGTTCGCTGCAATaGCCTACGAGCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLSCSLQ*PTSIFS
Trigger: GGAGAAAATGCTCGTAGGGCATTGCAGCGAACAGGA...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp GCCTGCAAATTACTGATGACTTCAGGAGGAATGTTTGGATTATTGAGTATGGAATCCTGTTCGCTGCAATaGCCTACGAGCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ACKLLMTSGGMFGLLSMESCSLQ*PTSIFS
Trigger: GGAGAAAATGCTCGTAGGGCATTGCAGCGAACAGGA...TTCCATACTCAATAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp CCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAAAGTGACGATCCTCCTGTTCGCTaGAATGCCCTACGAGCATTT +
Preference number: 4 (lower is better)
Translates to: PIEHRNCLNCFNCLLKSDDPPVR*NALRAF
Trigger: AAATGCTCGTAGGGCATTGCAGCGAACAGGAGGATC...GTCACTTTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCACTGCTTCAATTGCTTaGTCAAAAGTGACAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCTASIA*SKVTVP
Trigger: GGGCACTGTCACTTTTGAGCAAGCAATTGAAGCAGT...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp AAAGTGCTATGCCATAGCAGCTGTCTAATCATGAATCTTCAAAAGGGTTTCTTTCAAGTCCCATCCCAATaGCTCCAAGACCACGTGGTA +
Preference number: 4 (lower is better)
Translates to: KVLCHSSCLIMNLQKGFFQVPSQ*LQDHVV
Trigger: TACCACGTGGTCTTGGAGGCATTGGGATGGGACTTG...AAAGAAACCCTTTTGAAGATTCATGATTAGACAGCTGCTATGGCATAGCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTTGCTGCGCCTGTCTTaGCAAAGCTATGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLLLRLS*QSYGEK
Trigger: CTTCTCTCCATAGCTTTGGCAAGACAGGCGCAGCAA...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAATGGCATTAGCTAACTaGCAGAGTACAGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSMALAN*QSTGKQ
Trigger: CTGTTTCCCTGTACTCTGGCAGTTAGCTAATGCCAT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTCCACCTATGTTCAACTaGCTGGCACTAATAGGCTGT +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLPPMFN*LALIGC
Trigger: ACAGCCTATTAGTGCCAGCCAGTTGAACATAGGTGG...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCCATTCTATCAAAGCTaGAACTCATCCGGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLPFYQS*NSSGPV
Trigger: GACTGGACCGGATGAGTTCCAGCTTTGATAGAATGG...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAAAAATCTGTGCTACCTaGGTTACCCGAATTACCAGC +
Preference number: 4 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSKICAT*VTRITS
Trigger: GCTGGTAATTCGGGTAACCCAGGTAGCACAGATTTT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCGTAATGGTGTCCATCTaGAGAACCATAACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCVMVSI*RTITLQ
Trigger: CTGCAAGGTTATGGTTCTCCAGATGGACACCATTAC...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR CAA 72 bp GCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTaGGGAATAGTCTGCCTATTATCATACTTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: AVHFNGWKLDRK*GIVCLLSYLGL
Trigger: AAGCCCCAAGTATGATAATAGGCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
3UTR CAA 72 bp CACTGGCTGCCTATTCAGAAAGTTTCCCAACTCCTGTaGTCCATTAAAGCCACAACAGTTGACTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: HWLPIQKVSQLL*SIKATTVDFFF
Trigger: GAAGAAAAAGTCAACTGTTGTGGCTTTAATGGACAACAGGAGTTGGGAAACTTTCTGAATAGGCAGCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp CCAAGTCTACCGGCCTGCAAATTACTGATGACTTCAGGAGGAATGTTTGGATTATCTTCCAACCAACTTTaGAGTCAAGATTGGCAACAA +
Preference number: 4 (lower is better)
Translates to: PSLPACKLLMTSGGMFGLSSNQL*SQDWQQ
Trigger: TTGTTGCCAATCTTGACTTCAAAGTTGGTTGGAAGA...TAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGCCGGTAGACTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR TCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCAGTTCCAGCTATGCTaGACACTTCCTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLQFQLC*TLPLAS
Trigger: AGAAGCTAAAGGAAGTGTTCAGCATAGCTGGAACTG...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR TCA 90 bp AAACTGCCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAATTGCTTGCTCAAAAGTaGCAGTGCCCATTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KLPIEHRNCLNCFNCLLKLLAQK*QCPFLC
Trigger: GCAGAGGAATGGGCACTGTCACTTTTGAGCAAGCAA...TTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGGCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR TCA 90 bp TACTCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTGGCTGAACATAGAAATTGCTTaGACTGCTTCAATTGCTTGC +
Preference number: 4 (lower is better)
Translates to: YSPPGPKFPITPPMFNWLNIEIA*TASIAC
Trigger: GCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTT...CAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR TCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCTGTTTTACCATCATGTaGACGGTACTCTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCCFTIM*TVLFMR
Trigger: CCTCATGAAGAGTACCGTTCACATGATGGTAAAACA...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR TCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGGCAGGCTTTTTCAGCTaGTTCTGGGGAGTCAAATCT +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLAGFFS*FWGVKS
Trigger: AGATTTGACTCCCCAGAATCAGCTGAAAAAGCCTGC...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR TCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCGGGATCCAATGTGTTTaGTATGTTGTGCCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCGIQCV*YVVPWY
Trigger: ATACCAAGGCACAACATATCAAACACATTGGATCCC...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR TCA 90 bp AGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACAAAGACACCTCCTTGTTTTAATCTTGACTaGGAAAATGGGAACAGCACT +
Preference number: 4 (lower is better)
Translates to: RKHHQDYMGPEKGTKTPPCFNLD*ENGNST
Trigger: AGTGCTGTTCCCATTTTCTCAGTCAAGATTAAAACA...AGGAGGTGTCTTTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCGTGAACAACAGCCACTaGTGGGCTGGGAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFVNNSH*WAGKMK
Trigger: CTTCATCTTCCCAGCCCATCAGTGGCTGTTGTTCAC...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp CCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAAAGTGACCAGTGCCCATTCCTCTaGTCTTGCCATCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: PIEHRNCLNCFNCLLKSDQCPFL*SCHLCL
Trigger: AAGACAAAGATGGCAAGAGCAGAGGAATGGGCACTG...GTCACTTTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTACTGCTTCAATTGCTTaGTCAAAAGTGACAGTGCCC +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLTASIA*SKVTVP
Trigger: GGGCACTGTCACTTTTGAGCAAGCAATTGAAGCAGT...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCTCCAAATCCTCCCATaGTATTCATTGCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLLQILP*YSLLPD
Trigger: GTCTGGAAGCAATGAATAGCATGGGAGGATTTGGAG...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR GCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTCTCCAAATCCTCCCATaGTATTCATTGCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLLQILP*YSLLPD
Trigger: GTCTGGAAGCAATGAATAGCATGGGAGGATTTGGAG...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR GCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAAGATCCTATTCTTCCTaGAAACCCTCCAATCATTGC +
Preference number: 4 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSRSYSS*KPSNHC
Trigger: GCAATGATTGGAGGGTTTGCAGGAAGAATAGGATCT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTGACTTAACTAGCTACTaGTGCTTGGCCATAATCCAC +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLDLTSY*CLAIIH
Trigger: GTGGATTATGGCCAAGCAGCAGTAGCTAGTTAAGTC...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCTGGGAAAACAATGGGTaGTCACTGCTTAACTGGATT +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCWENNG*SLLNWI
Trigger: AATCCAGTTAAGCAGTGAGCACCCATTGTTTTCCCA...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp AGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACAAAGACACCTCCTTATATTATAAAGAAATaGAGTCCTTGCTGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: RKHHQDYMGPEKGTKTPPYIIKK*SPCCAC
Trigger: ACAGGCGCAGCAAGGACTGCATTTCTTTATAATATA...AGGAGGTGTCTTTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCACTTACAATCTCTCTGTaGCTAGCTGGTCCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSLTISL*LAGPRK
Trigger: TTTTCTTGGACCAGCTAGGCACAGAGAGATTGTAAG...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp CCAAGTCTACCGGCCTGCAAATTACTGATGACTTCAGGAGGAATGTTTGGATTAGGAAAGGTAAAACAATaGCACTCTCCTCACCAATTT +
Preference number: 4 (lower is better)
Translates to: PSLPACKLLMTSGGMFGLGKVKQ*HSPHQF
Trigger: AAATTGGTGAGGAGAGTGGCATTGTTTTACCTTTCC...TAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGCCGGTAGACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CCA 90 bp CCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAAAGTGACCCACCTATGTTCAACTaGCTGGCACTAATAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PIEHRNCLNCFNCLLKSDPPMFN*LALIGC
Trigger: ACAGCCTATTAGTGCCAGCCAGTTGAACATAGGTGG...GTCACTTTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGCCATTCTATCAAAGCTaGAACTCATCCGGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLPFYQS*NSSGPV
Trigger: GACTGGACCGGATGAGTTCCAGCTTTGATAGAATGG...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR CCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAATATCTGGTTGCCTTTaGAGCCTATTCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSISGCL*SLFSLS
Trigger: TGAGAGAGAGAATAGGCTCCAAAGGCAACCAGATAT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCATATCTGGTTGCCTTTaGAGCCTATTCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCISGCL*SLFSLS
Trigger: TGAGAGAGAGAATAGGCTCCAAAGGCAACCAGATAT...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CCA 90 bp AGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACAAAGACACCTCCTAACTGCATTTATAAATaGATCAGCTCCTGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: RKHHQDYMGPEKGTKTPPNCIYK*ISSCRS
Trigger: ACTTCTGCAGGAGCTGATCCATTTATAAATGCAGTT...AGGAGGTGTCTTTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGGACTTTTTCTTCTGCTaGGTTACTGCTCACCTTGCC +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLDFFFC*VTAHLA
Trigger: GGCAAGGTGAGCAGTAACCCAGCAGAAGAAAAAGTC...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTTCTCTCACTAGTCACTaGAGACCACCACTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLSLTSH*RPPLFL
Trigger: AAGGAAAAGTGGTGGTCTCCAGTGACTAGTGAGAGA...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR CAA 72 bp AAAAATGTAATGGTGTCCATCTGGAGAACCATAACCTaGCAGCACGGCGTAATACCTGCTATCAAGAAACTT +
Preference number: 4 (lower is better)
Translates to: KNVMVSIWRTIT*QHGVIPAIKKL
Trigger: AAGTTTCTTGATAGCAGGTATTACGCCGTGCTGCAAGGTTATGGTTCTCCAGATGGACACCATTACATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR CAA 72 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTaGGCCCCTATTCAGAGACTGTGCAGCGTACACAAT +
Preference number: 4 (lower is better)
Translates to: ITYHITGLNTIM*APIQRLCSVHN
Trigger: ATTGTGTACGCTGCACAGTCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp GCCTGCAAATTACTGATGACTTCAGGAGGAATGTTTGGATTATTGAGTATGGAACAGTTCCAGCTATGCTaGACACTTCCTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ACKLLMTSGGMFGLLSMEQFQLC*TLPLAS
Trigger: AGAAGCTAAAGGAAGTGTTCAGCATAGCTGGAACTG...TTCCATACTCAATAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR TCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCCTGGGGAGTCAAATCTaGCTGTTCCACAGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFLGSQI*LFHSLL
Trigger: CAAAAGGCTGTGGAACAGTCAGATTTGACTCCCCAG...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAACCATTCATTTAAACTaGATGACCAGACTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSTIHLN*MTRLAV
Trigger: GACAGCAAGTCTGGTCATTCAGTTTAAATGAATGGT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTGGGATCCAATGTGTTTaGTATGTTGTGCCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLGIQCV*YVVPWY
Trigger: ATACCAAGGCACAACATATCAAACACATTGGATCCC...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR TCA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGACCCGAATTACCAGCCTaGTTCAAATATGTTGCTAGC +
Preference number: 4 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRPELPA*FKYVAS
Trigger: GCTAGCAACATATTTGAATCAGGCTGGTAATTCGGG...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTATTATGCCAATGAGCTaGGGCAGAAAATGTTCACCA +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLIMPMS*GRKCSP
Trigger: TGGTGAACATTTTCTGCCTCAGCTCATTGGCATAAT...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAATTCCAACAGGTCTGTaGGTTAACCTCATCACAATT +
Preference number: 4 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSIPTGL*VNLITI
Trigger: AATTGTGATGAGGTTAACTCACAGACCTGTTGGAAT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp CCAAGTCTACCGGCCTGCAAATTACTGATGACTTCAGGAGGAATGTTTGGATTAGTGACTACAGCATCTTaGCAAAATAGGAATCTGATA +
Preference number: 4 (lower is better)
Translates to: PSLPACKLLMTSGGMFGLVTTAS*QNRNLI
Trigger: TATCAGATTCCTATTTTGTCAAGATGCTGTAGTCAC...TAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGCCGGTAGACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp GCCTGCAAATTACTGATGACTTCAGGAGGAATGTTTGGATTATTGAGTATGGAAACTGCTTCAATTGCTTaGTCAAAAGTGACAGTGCCC +
Preference number: 4 (lower is better)
Translates to: ACKLLMTSGGMFGLLSMETASIA*SKVTVP
Trigger: GGGCACTGTCACTTTTGAGCAAGCAATTGAAGCAGT...TTCCATACTCAATAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp CCAAGTCTACCGGCCTGCAAATTACTGATGACTTCAGGAGGAATGTTTGGATTATTGAACTGCTTCAATTaGTTGCTCAAAAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: PSLPACKLLMTSGGMFGLLNCFN*LLKSDS
Trigger: ACTGTCACTTTTGAGCAAGCAATTGAAGCAGTTCAA...TAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGCCGGTAGACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCACATGGCTTGAAATTATaGATTACGATCCAAGCGAAC +
Preference number: 4 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSHGLKL*ITIQAN
Trigger: GTTCGCTTGGATCGTAATGCATAATTTCAAGCCATG...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCCATGGCTTGAAATTATaGATTACGATCCAAGCGAAC +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCHGLKL*ITIQAN
Trigger: GTTCGCTTGGATCGTAATGCATAATTTCAAGCCATG...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR GCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCAAGTTGGGAATAGTCTaGCTATTATCATACTTGGGG +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCKLGIV*LLSYLG
Trigger: CCCCAAGTATGATAATAGGCAGACTATTCCCAACTT...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR GCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTCATACCAGACACAATTaGAAGTGTGTTGGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLHTRHN*KCVGCK
Trigger: CTTGCAACCAACACACTTGCAATTGTGTCTGGTATG...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGAAACTACTGCCTGTGTaGCAACATAACCCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLKLLPV*QHNPAC
Trigger: ACAAGCTGGGTTATGTTGGCACACAGGCAGTAGTTT...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTTTAACTAGCTACTGCTaGTTGGCCATAATCCACTAC +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLLTSYC*LAIIHY
Trigger: GTAGTGGATTATGGCCAAGCAGCAGTAGCTAGTTAA...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp AGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACAAAGACACCTCCTAACCTTTTTCATGTCTaGAATATGGATATCCGCATT +
Preference number: 4 (lower is better)
Translates to: RKHHQDYMGPEKGTKTPPNLFHV*NMDIRI
Trigger: AATGCGGATATCCATATTGCAGACATGAAAAAGGTT...AGGAGGTGTCTTTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGATAGAGCACAGTATGTaGATAGGAAGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLIEHSM*IGRKER
Trigger: CCTCTCCTTCCTTCCTATGCACATACTGTGCTCTAT...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGACAAATGGGACAGATTaGCAAAATGTGGTGAGGACA +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLTNGTD*QNVVRT
Trigger: TGTCCTCACCACATTTTGGCAATCTGTCCCATTTGT...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAACAGGTTATATACATTaGATAACTCCAGAGGACACC +
Preference number: 4 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSTGYIH*ITPEDT
Trigger: GGTGTCCTCTGGAGTTATGCAATGTATATAACCTGT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp ACAAAGTATGGTCCAGGGACTCTTGAGGGTTCAATAGGTCAAAACTATTTAAGTAGGCATGGTTTAAAGTaGTATGCCATAGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TKYGPGTLEGSIGQNYLSRHGLK*YAIAAV
Trigger: GACAGCTGCTATGGCATAGCACTTTAAACCATGCCT...ACTTAAATAGTTTTGACCTATTGAACCCTCAAGAGTCCCTGGACCATACTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGGCAACAAAAATTGTaGAACCAAGTCTACCGGCCT +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLWQQKL*NQVYRP
Trigger: AGGCCGGTAGACTTGGTTCCACAATTTTTGTTGCCA...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CCA 90 bp AATGTAAAACACAGCTACACAGGTTATATACATTGCATAACTCCAGAGGACACCTGGCAACAAAAATTGTaGAACCAAGTCTACCGGCCT +
Preference number: 4 (lower is better)
Translates to: NVKHSYTGYIHCITPEDTWQQKL*NQVYRP
Trigger: AGGCCGGTAGACTTGGTTCCACAATTTTTGTTGCCA...GGTGTCCTCTGGAGTTATGCAATGTATATAACCTGTGTAGCTGTGTTTTACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCGTTCACTTCAATGGCTaGAAACTAGACAGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCVHFNG*KLDRKL
Trigger: CAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAAC...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCAAGGAGCTCTATTTTTaGGAAAACAATGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCKELYF*ENNGCS
Trigger: TGAGCACCCATTGTTTTCCCAAAAATAGAGCTCCTT...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCATCACCAAGACTATATaGGGCCAGAAAAAGGAACAA +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCITKTI*GQKKEQ
Trigger: TTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGAT...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGAGGGAGCATTTAAATTaGGCCTTGCTGGACAGGAAA +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLREHLN*ALLDRK
Trigger: TTTCCTGTCCAGCAAGGCCCAATTTAAATGCTCCCT...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCAAGGTGGTGACTGAGTaGACAGATACTAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCKVVTE*TDTNFF
Trigger: GAAAAAGTTAGTATCTGTCCACTCAGTCACCACCTT...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGTCAACACTATCATGTTaGCCCCTATTCAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLSTLSC*PLFRDC
Trigger: ACAGTCTCTGAATAGGGGCCAACATGATAGTGTTGA...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCCAAATTCTTCATCTTTaGATTCAACCACACCACAAC +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCQILHL*IQPHHN
Trigger: GTTGTGGTGTGGTTGAATTCAAAGATGAAGAATTTG...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR TCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCAACATAGAAATTGCTTaGACTGCTTCAATTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCNIEIA*TASIAC
Trigger: GCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTT...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR TCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCACATGACCACACTGACTaGATTTCTCTTTTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSHDHTD*ISLLVS
Trigger: AGAAACTAAAAGAGAAATTCAGTCAGTGTGGTCATG...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGGGGATCCAATGTGTTTaGTATGTTGTGCCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLGIQCV*YVVPWY
Trigger: ATACCAAGGCACAACATATCAAACACATTGGATCCC...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR TCA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAAGCACATATTGGCTCTaGATTCTAAATGTGCCTATT +
Preference number: 4 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSSTYWL*ILNVPI
Trigger: AATAGGCACATTTAGAATTCAGAGCCAATATGTGCT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTCTACATTGGCAAAGCTaGATAACTGCAACAGAAATC +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLLHWQS*ITATEI
Trigger: GATTTCTGTTGCAGTTATTCAGCTTTGCCAATGTAG...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCAGGAGATGTCCAATTaGCACTTCATAAACACTATC +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLQEMSN*HFINTI
Trigger: GATAGTGTTTATGAAGTGTCAATTGGACATCTCCTG...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGGCATCATCAATATTATaGAGTGGAGACAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLASSIL*SGDNWS
Trigger: ACTCCAGTTGTCTCCACTTCATAATATTGATGATGC...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp AATGTAAAACACAGCTACACAGGTTATATACATTGCATAACTCCAGAGGACACCAGATGTGAGACTATATaGAGGAAGCATCACCAAGAC +
Preference number: 4 (lower is better)
Translates to: NVKHSYTGYIHCITPEDTRCETI*RKHHQD
Trigger: GTCTTGGTGATGCTTCCTTCATATAGTCTCACATCT...GGTGTCCTCTGGAGTTATGCAATGTATATAACCTGTGTAGCTGTGTTTTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCACCGAACTAAAATATaGAGAGACAAAGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLHRTKI*RDKEVC
Trigger: ACAGACCTCTTTGTCTCTTCATATTTTAGTTCGGTG...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGATCAGCTCCATGGCTTaGAATTATGCATTACGATCC +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLISSMA*NYALRS
Trigger: GGATCGTAATGCATAATTTCAAGCCATGGAGCTGAT...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560172.5
CDS-3UTR TCA 90 bp CCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAAAGTGACAGCCAAATAACTACCTaGAAAGCCACCTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: PIEHRNCLNCFNCLLKSDSQITT*KATFPN
Trigger: ATTTGGGAAGGTGGCTTTTCAGGTAGTTATTTGGCT...GTCACTTTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTCATGGCTTGAAATTATaGATTACGATCCAAGCGAAC +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLHGLKL*ITIQAN
Trigger: GTTCGCTTGGATCGTAATGCATAATTTCAAGCCATG...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR GCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTAAGTTGGGAATAGTCTaGCTATTATCATACTTGGGG +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLKLGIV*LLSYLG
Trigger: CCCCAAGTATGATAATAGGCAGACTATTCCCAACTT...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR GCA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGACTCCAATCATTGCACTaGCAAGTCTACCAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRLQSLH*QVYQRN
Trigger: ATTCCTTTGGTAGACTTGGCAGTGCAATGATTGGAG...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGAAACCCTCCAATCATTaGACTGCCAAGTCTACCAAA +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLKPSNH*TAKSTK
Trigger: TTTGGTAGACTTGGCAGTGCAATGATTGGAGGGTTT...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCAAGAAATGCAGTCCTTaGTGCGCCTGTCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFKKCSP*CACLAK
Trigger: TTTGGCAAGACAGGCGCAGCAAGGACTGCATTTCTT...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp AAAGTGCTATGCCATAGCAGCTGTCTAATCATGAATCTTCAAAAGGGTTTCTTTTGGCAACAAAAATTGTaGAACCAAGTCTACCGGCCT +
Preference number: 4 (lower is better)
Translates to: KVLCHSSCLIMNLQKGFFWQQKL*NQVYRP
Trigger: AGGCCGGTAGACTTGGTTCCACAATTTTTGTTGCCA...AAAGAAACCCTTTTGAAGATTCATGATTAGACAGCTGCTATGGCATAGCACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGATATCTGGTTGCCTTTaGAGCCTATTCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLISGCL*SLFSLS
Trigger: TGAGAGAGAGAATAGGCTCCAAAGGCAACCAGATAT...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR CCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGGCCTATTATCATACTTaGGGCTTGCTACATTATCAG +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLAYYHT*GLLHYQ
Trigger: CTGATAATGTAGCAAGCCCCAAGTATGATAATAGGC...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTGTTCACTTCAATGGCTaGAAACTAGACAGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLVHFNG*KLDRKL
Trigger: CAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAAC...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTAGCAGTTCACTTCAATaGCTGGAAACTAGACAGAAA +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLSSSLQ*LETRQK
Trigger: TTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCT...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGAGCAGTTCACTTCAATaGCTGGAAACTAGACAGAAA +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLSSSLQ*LETRQK
Trigger: TTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCT...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCCTATGTCTAACATCGTaGGATCCAATGTGTTTGATA +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCLCLTS*DPMCLI
Trigger: TATCAAACACATTGGATCCCACGATGTTAGACATAG...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CCA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCACATATATCCTGGTTTaGATGGTCACAATAACTGGT +
Preference number: 4 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCTYILV*MVTITG
Trigger: ACCAGTTATTGTGACCATCCAAACCAGGATATATGT...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTCTTCCAACCAACTTTaGAGTCAAGATTGGCAACAA +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLSSNQL*SQDWQQ
Trigger: TTGTTGCCAATCTTGACTTCAAAGTTGGTTGGAAGA...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR TCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGAACATAGAAATTGCTTaGACTGCTTCAATTGCTTGC +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLNIEIA*TASIAC
Trigger: GCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTT...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR TCA 90 bp AAACTGCCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAATGTTTTACCATCATGTaGACGGTACTCTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: KLPIEHRNCLNCFNCLLKCFTIM*TVLFMR
Trigger: CCTCATGAAGAGTACCGTTCACATGATGGTAAAACA...TTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGGCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR TCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTCATGACCACACTGACTaGATTTCTCTTTTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLHDHTD*ISLLVS
Trigger: AGAAACTAAAAGAGAAATTCAGTCAGTGTGGTCATG...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR TCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCATGACCACACTGACTaGATTTCTCTTTTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLHDHTD*ISLLVS
Trigger: AGAAACTAAAAGAGAAATTCAGTCAGTGTGGTCATG...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR TCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGACCATTCATTTAAACTaGATGACCAGACTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLTIHLN*MTRLAV
Trigger: GACAGCAAGTCTGGTCATTCAGTTTAAATGAATGGT...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR TCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGAATGTATTATGCCAATaGGCTGAGGCAGAAAATGTT +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLNVLCQ*AEAENV
Trigger: AACATTTTCTGCCTCAGCTCATTGGCATAATACATT...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp ACAAAGTATGGTCCAGGGACTCTTGAGGGTTCAATAGGTCAAAACTATTTAAGTGATTTTAGCTGCCTATaGTATGGTAGCATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TKYGPGTLEGSIGQNYLSDFSCL*YGSISA
Trigger: AGCTGAAATGCTACCATATCATAGGCAGCTAAAATC...ACTTAAATAGTTTTGACCTATTGAACCCTCAAGAGTCCCTGGACCATACTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR TCA 90 bp AAACTGCCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAATCTAAAAATGAACTGTaGGTTCTTCCAGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KLPIEHRNCLNCFNCLLKSKNEL*VLPGEQ
Trigger: CTGCTCACCTGGAAGAACTCACAGTTCATTTTTAGA...TTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGGCAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGACTGCTTCAATTGCTTaGTCAAAAGTGACAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLETASIA*SKVTVP
Trigger: GGGCACTGTCACTTTTGAGCAAGCAATTGAAGCAGT...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTTTGAACTGCTTCAATTaGTTGCTCAAAAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLLNCFN*LLKSDS
Trigger: ACTGTCACTTTTGAGCAAGCAATTGAAGCAGTTCAA...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGCATGGCTTGAAATTATaGATTACGATCCAAGCGAAC +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLHGLKL*ITIQAN
Trigger: GTTCGCTTGGATCGTAATGCATAATTTCAAGCCATG...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR GCA 90 bp AATGTAAAACACAGCTACACAGGTTATATACATTGCATAACTCCAGAGGACACCAAGTTGGGAATAGTCTaGCTATTATCATACTTGGGG +
Preference number: 4 (lower is better)
Translates to: NVKHSYTGYIHCITPEDTKLGIV*LLSYLG
Trigger: CCCCAAGTATGATAATAGGCAGACTATTCCCAACTT...GGTGTCCTCTGGAGTTATGCAATGTATATAACCTGTGTAGCTGTGTTTTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGGTGTTTGATATGTTGTaGCTTGGTATTCCATGGTTT +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLVFDML*LGIPWF
Trigger: AAACCATGGAATACCAAGGCACAACATATCAAACAC...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR GCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGACAATGGGTGCTCACTaGTTAACTGGATTGTATTTT +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLTMGAH*LTGLYF
Trigger: AAAATACAATCCAGTTAAGCAGTGAGCACCCATTGT...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGAGGCATGGTTTAAAGTaGTATGCCATAGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLERHGLK*YAIAAV
Trigger: GACAGCTGCTATGGCATAGCACTTTAAACCATGCCT...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CCA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGTGGCAACAAAAATTGTaGAACCAAGTCTACCGGCCT +
Preference number: 4 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLEWQQKL*NQVYRP
Trigger: AGGCCGGTAGACTTGGTTCCACAATTTTTGTTGCCA...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CCA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGAGCCTATTATCATACTTaGGGCTTGCTACATTATCAG +
Preference number: 4 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRAYYHT*GLLHYQ
Trigger: CTGATAATGTAGCAAGCCCCAAGTATGATAATAGGC...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGGTTCACTTCAATGGCTaGAAACTAGACAGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLVHFNG*KLDRKL
Trigger: CAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAAC...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGAGCAGTTCACTTCAATaGCTGGAAACTAGACAGAAA +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLSSSLQ*LETRQK
Trigger: TTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCT...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGAACTGCATTTATAAATaGATCAGCTCCTGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLNCIYK*ISSCRS
Trigger: ACTTCTGCAGGAGCTGATCCATTTATAAATGCAGTT...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCTATGTCTAACATCGTaGGATCCAATGTGTTTGATA +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLLCLTS*DPMCLI
Trigger: TATCAAACACATTGGATCCCACGATGTTAGACATAG...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTCTATGTCTAACATCGTaGGATCCAATGTGTTTGATA +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLLCLTS*DPMCLI
Trigger: TATCAAACACATTGGATCCCACGATGTTAGACATAG...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR CCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGCACTGTTATTTAGCCTaGGGTACAATTCAAGAGATC +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLHCYLA*GTIQEI
Trigger: GATCTCTTGAATTGTACCCCAGGCTAAATAACAGTG...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGCATGACCACACTGACTaGATTTCTCTTTTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLHDHTD*ISLLVS
Trigger: AGAAACTAAAAGAGAAATTCAGTCAGTGTGGTCATG...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR TCA 90 bp AATGTAAAACACAGCTACACAGGTTATATACATTGCATAACTCCAGAGGACACCATAAGTAGCAGCTACTaGGGTCTTCATTCCATAAAT +
Preference number: 4 (lower is better)
Translates to: NVKHSYTGYIHCITPEDTISSSY*GLHSIN
Trigger: ATTTATGGAATGAAGACCTCAGTAGCTGCTACTTAT...GGTGTCCTCTGGAGTTATGCAATGTATATAACCTGTGTAGCTGTGTTTTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGAGCCAAATAACTACCTaGAAAGCCACCTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLESQITT*KATFPN
Trigger: ATTTGGGAAGGTGGCTTTTCAGGTAGTTATTTGGCT...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR TCA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGTCTAAAAATGAACTGTaGGTTCTTCCAGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLESKNEL*VLPGEQ
Trigger: CTGCTCACCTGGAAGAACTCACAGTTCATTTTTAGA...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTTGAACTGCTTCAATTaGTTGCTCAAAAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLLNCFN*LLKSDS
Trigger: ACTGTCACTTTTGAGCAAGCAATTGAAGCAGTTCAA...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp ACAAAGTATGGTCCAGGGACTCTTGAGGGTTCAATAGGTCAAAACTATTTAAGTTTGAACTGCTTCAATTaGTTGCTCAAAAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: TKYGPGTLEGSIGQNYLSLNCFN*LLKSDS
Trigger: ACTGTCACTTTTGAGCAAGCAATTGAAGCAGTTCAA...ACTTAAATAGTTTTGACCTATTGAACCCTCAAGAGTCCCTGGACCATACTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTTTCTCTTTTAGTTTCTaGCAAGTCAAGTCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLFSFSF*QVKSKG
Trigger: ACCTTTTGACTTGACTTGGCAGAAACTAAAAGAGAA...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR GCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGATCATACTTGGGGCTTaGTACATTATCAGTTCTATA +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLIILGA*YIISSI
Trigger: TATAGAACTGATAATGTAGCAAGCCCCAAGTATGAT...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR GCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGGTGTTTGATATGTTGTaGCTTGGTATTCCATGGTTT +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLVFDML*LGIPWF
Trigger: AAACCATGGAATACCAAGGCACAACATATCAAACAC...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR GCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCGCAAAGCTGAATAACTaGAACAGAAATCACACAGCC +
Preference number: 4 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFAKLNN*NRNHTA
Trigger: GGCTGTGTGATTTCTGTTGCAGTTATTCAGCTTTGC...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGTCATTCAATAGATACTaGCCAAAAGCTATCAACTCT +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLSFNRY*PKAINS
Trigger: AGAGTTGATAGCTTTTGGGCAGTATCTATTGAATGA...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp AAACTGCCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAATGGTTTAAAGTGCTATaGCATAGCAGCTGTCTAATC +
Preference number: 4 (lower is better)
Translates to: KLPIEHRNCLNCFNCLLKWFKVL*HSSCLI
Trigger: GATTAGACAGCTGCTATGGCATAGCACTTTAAACCA...TTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGGCAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CCA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTCCATTTCATGTCATATaGGATGTTGCTAATGAAAAC +
Preference number: 4 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLPFHVI*DVANEN
Trigger: GTTTTCATTAGCAACATCCCATATGACATGAAATGG...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGCTATGTCTAACATCGTaGGATCCAATGTGTTTGATA +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLLCLTS*DPMCLI
Trigger: TATCAAACACATTGGATCCCACGATGTTAGACATAG...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR CCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCTATTCCAGATCCTACTaGACCCATGTTAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFYSRSY*THVRRS
Trigger: GGATCTTCTAACATGGGTCCAGTAGGATCTGGAATA...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGTGCTCACTGCTTAACTaGATTGTATTTTATTTGGCT +
Preference number: 4 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLCSLLN*IVFYLA
Trigger: AGCCAAATAAAATACAATCCAGTTAAGCAGTGAGCA...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGAATGGATCAGCTCCATaGCTTGAAATTATGCATTAC +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLNGSAP*LEIMHY
Trigger: GTAATGCATAATTTCAAGCCATGGAGCTGATCCATT...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560172.5
3UTR CAA 72 bp GACAGAAAGTTGGGAATAGTCTGCCTATTATCATACTaGGGGCTTGCTACATTATCAGTTCTATATGAACTT +
Preference number: 4 (lower is better)
Translates to: DRKLGIVCLLSY*GLATLSVLYEL
Trigger: AAGTTCATATAGAACTGATAATGTAGCAAGCCCCAAGTATGATAATAGGCAGACTATTCCCAACTTTCTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
3UTR CAA 72 bp ATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTaGTGCCTTGGTATTCCATGGTTTATTAAAACTGCA +
Preference number: 4 (lower is better)
Translates to: MSNIVGSNVFDM*CLGIPWFIKTA
Trigger: TGCAGTTTTAATAAACCATGGAATACCAAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
3UTR CAA 72 bp ATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTaGATATGTTGTGCCTTGGTATTCCATGGTTTATTA +
Preference number: 4 (lower is better)
Translates to: IWLCLTSWDPMC*ICCALVFHGLL
Trigger: TAATAAACCATGGAATACCAAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
3UTR CAA 72 bp AGGTGTGAGAGTCTAAGGGTAAGGGAGAAAACTTGTTaGGATCAGAATGATTATGATAATGAGCCTCATAAT +
Preference number: 4 (lower is better)
Translates to: RCESLRVREKTC*DQNDYDNEPHN
Trigger: ATTATGAGGCTCATTATCATAATCATTCTGATCCAAACAAGTTTTCTCCCTTACCCTTAGACTCTCACACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR TCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCTCTTCCAACCAACTTTaGAGTCAAGATTGGCAACAA +
Preference number: 4 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFSSNQL*SQDWQQ
Trigger: TTGTTGCCAATCTTGACTTCAAAGTTGGTTGGAAGA...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp AAACTGCCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAAAACATAGAAATTGCTTaGACTGCTTCAATTGCTTGC +
Preference number: 4 (lower is better)
Translates to: KLPIEHRNCLNCFNCLLKNIEIA*TASIAC
Trigger: GCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTT...TTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGGCAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGAGAAATTGCTTGAACTaGTTCAATTGCTTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLRNCLN*FNCLLK
Trigger: TTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCT...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR GCA 90 bp AATGTAAAACACAGCTACACAGGTTATATACATTGCATAACTCCAGAGGACACCAGAAATTGCTTGAACTaGTTCAATTGCTTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: NVKHSYTGYIHCITPEDTRNCLN*FNCLLK
Trigger: TTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCT...GGTGTCCTCTGGAGTTATGCAATGTATATAACCTGTGTAGCTGTGTTTTACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp ACAAAGTATGGTCCAGGGACTCTTGAGGGTTCAATAGGTCAAAACTATTTAAGTAGAAATTGCTTGAACTaGTTCAATTGCTTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: TKYGPGTLEGSIGQNYLSRNCLN*FNCLLK
Trigger: TTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCT...ACTTAAATAGTTTTGACCTATTGAACCCTCAAGAGTCCCTGGACCATACTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp AATGTAAAACACAGCTACACAGGTTATATACATTGCATAACTCCAGAGGACACCATCATACTTGGGGCTTaGTACATTATCAGTTCTATA +
Preference number: 4 (lower is better)
Translates to: NVKHSYTGYIHCITPEDTIILGA*YIISSI
Trigger: TATAGAACTGATAATGTAGCAAGCCCCAAGTATGAT...GGTGTCCTCTGGAGTTATGCAATGTATATAACCTGTGTAGCTGTGTTTTACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGATCATACTTGGGGCTTaGTACATTATCAGTTCTATA +
Preference number: 4 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLIILGA*YIISSI
Trigger: TATAGAACTGATAATGTAGCAAGCCCCAAGTATGAT...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR GCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCGTCATTAAAAATCTGTaGTACCTGGGTTACCCGAAT +
Preference number: 4 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFVIKNL*YLGYPN
Trigger: ATTCGGGTAACCCAGGTAGCACAGATTTTTAATGAC...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR GCA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGGGAAAGGTAAAACAATaGCACTCTCCTCACCAATTT +
Preference number: 4 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLEGKVKQ*HSPHQF
Trigger: AAATTGGTGAGGAGAGTGGCATTGTTTTACCTTTCC...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CCA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGACCATTTCATGTCATATaGGATGTTGCTAATGAAAAC +
Preference number: 4 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRPFHVI*DVANEN
Trigger: GTTTTCATTAGCAACATCCCATATGACATGAAATGG...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CCA 90 bp CACCATCAACCGTGCCCAAATAAAACAGCGAACTTAATCAATAAATGTTCTGACCCATTTCATGTCATATaGGATGTTGCTAATGAAAAC +
Preference number: 4 (lower is better)
Translates to: HHQPCPNKTANLINKCSDPFHVI*DVANEN
Trigger: GTTTTCATTAGCAACATCCCATATGACATGAAATGG...GTCAGAACATTTATTGATTAAGTTCGCTGTTTTATTTGGGCACGGTTGATGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS-3UTR CCA 90 bp CCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAAAGTGACCCATTTCATGTCATATaGGATGTTGCTAATGAAAAC +
Preference number: 4 (lower is better)
Translates to: PIEHRNCLNCFNCLLKSDPFHVI*DVANEN
Trigger: GTTTTCATTAGCAACATCCCATATGACATGAAATGG...GTCACTTTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCCTCAGAAAAAGGGGCTaGTTTGGAAGAAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFLRKRG*FGRKKK
Trigger: TTTCTTCTTTCTTCCAAACCAGCCCCTTTTTCTGAG...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR TCA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGCAAATTCTTCATCTTTaGATTCAACCACACCCTTTC +
Preference number: 4 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLEQILHL*IQPHPF
Trigger: GAAAGGGTGTGGTTGAATTCAAAGATGAAGAATTTG...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610570.4
CDS-3UTR GCA 90 bp AAAGTGCTATGCCATAGCAGCTGTCTAATCATGAATCTTCAAAAGGGTTTCTTTAGAAATTGCTTGAACTaGTTCAATTGCTTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: KVLCHSSCLIMNLQKGFFRNCLN*FNCLLK
Trigger: TTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCT...AAAGAAACCCTTTTGAAGATTCATGATTAGACAGCTGCTATGGCATAGCACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR GCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCGTGTTTGATATGTTGTaGCTTGGTATTCCATGGTTT +
Preference number: 4 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFVFDML*LGIPWF
Trigger: AAACCATGGAATACCAAGGCACAACATATCAAACAC...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
3UTR CAA 72 bp AAATTACTGATGACTTCAGGAGGAATGTTTGGATTATaGAGTATGGAAGGTGGTAAATTCATCAACCCTGAT +
Preference number: 4 (lower is better)
Translates to: KLLMTSGGMFGL*SMEGGKFINPD
Trigger: ATCAGGGTTGATGAATTTACCACCTTCCATACTCAATAATCCAAACATTCCTCCTGAAGTCATCAGTAATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CCA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCACATTGGTTGAAGCTTaGCAAACTTTTTATGAGTTG +
Preference number: 4 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFTLVEA*QTFYEL
Trigger: CAACTCATAAAAAGTTTGCCAAGCTTCAACCAATGT...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS GCA 90 bp TTCTCCATTTTAACGCCATTGGAGCTGCTGCTGTGCTGCGGCTGCTaGTTCTCCGCCTCCGCGGGGTGCGGCTCTCGCCGCGGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: FSILTPLELLLCCGC*FSASAGCGSRRGSP
Trigger: GGGCGAGCCGCGGCGAGAGCCGCACCCCGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAGCAGCAGCTCCAATGGCGTTAAAATGGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000559862.5
ENST00000561151.1
ENST00000561351.5
ENST00000610570.4
CDS GCA 90 bp TCATTCTCCATTTTAACGCCATTGGAGCTGCTGCTGTGCTGCGGCTaGTGCTTCTCCGCCTCCGCGGGGTGCGGCTCTCGCCGCGGCTCG +
Preference number: 5 (lower is better)
Translates to: SFSILTPLELLLCCG*CFSASAGCGSRRGS
Trigger: CGAGCCGCGGCGAGAGCCGCACCCCGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAGCAGCAGCTCCAATGGCGTTAAAATGGAGAATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000559862.5
ENST00000561151.1
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp CCCCATCTCTCTCCGTCGCCTCAGGCCTCCCTCTTTAATATTAAGGGGTCTTCCGGCACCTCGGCCTTGTaGGCGTCCGCCATCCCGCCG +
Preference number: 5 (lower is better)
Translates to: PHLSPSPQASLFNIKGSSGTSAL*ASAIPP
Trigger: CGGCGGGATGGCGGACGCCAACAAGGCCGAGGTGCC...GGAAGACCCCTTAATATTAAAGAGGGAGGCCTGAGGCGACGGAGAGAGATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS GCA 90 bp GCTGATTCATCATTCTCCATTTTAACGCCATTGGAGCTGCTGCTGTaGTGCGGCTGCTGCTTCTCCGCCTCCGCGGGGTGCGGCTCTCGC +
Preference number: 5 (lower is better)
Translates to: ADSSFSILTPLELLL*CGCCFSASAGCGSR
Trigger: GCGAGAGCCGCACCCCGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAGCAGCAGCTCCAATGGCGTTAAAATGGAGAATGATGAATCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000559862.5
ENST00000561151.1
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCGGCACCTCGGCCTTGTaGGCGTCCGCCATCCCGCCG +
Preference number: 5 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCGTSAL*ASAIPP
Trigger: CGGCGGGATGGCGGACGCCAACAAGGCCGAGGTGCC...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CAA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCACCGGGCACCTCGGCCTaGTTGGCGTCCGCCATCCCG +
Preference number: 5 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSPGTSA*LASAIP
Trigger: CGGGATGGCGGACGCCAACAAGGCCGAGGTGCCCGG...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGGGCACCTCGGCCTTGTaGGCGTCCGCCATCCCGCCG +
Preference number: 5 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLGTSAL*ASAIPP
Trigger: CGGCGGGATGGCGGACGCCAACAAGGCCGAGGTGCC...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CAA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTCCGGGCACCTCGGCCTaGTTGGCGTCCGCCATCCCG +
Preference number: 5 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLPGTSA*LASAIP
Trigger: CGGGATGGCGGACGCCAACAAGGCCGAGGTGCCCGG...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CAA 90 bp CCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAAAGTGACGGCACCTCGGCCTTGTaGGCGTCCGCCATCCCGCCG +
Preference number: 5 (lower is better)
Translates to: PIEHRNCLNCFNCLLKSDGTSAL*ASAIPP
Trigger: CGGCGGGATGGCGGACGCCAACAAGGCCGAGGTGCC...GTCACTTTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp CACCATCAACCGTGCCCAAATAAAACAGCGAACTTAATCAATAAATGTTCTGACCCGGGCACCTCGGCCTaGTTGGCGTCCGCCATCCCG +
Preference number: 5 (lower is better)
Translates to: HHQPCPNKTANLINKCSDPGTSA*LASAIP
Trigger: CGGGATGGCGGACGCCAACAAGGCCGAGGTGCCCGG...GTCAGAACATTTATTGATTAAGTTCGCTGTTTTATTTGGGCACGGTTGATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS-3UTR CAA 90 bp AAACTGCCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAACCGGGCACCTCGGCCTaGTTGGCGTCCGCCATCCCG +
Preference number: 5 (lower is better)
Translates to: KLPIEHRNCLNCFNCLLKPGTSA*LASAIP
Trigger: CGGGATGGCGGACGCCAACAAGGCCGAGGTGCCCGG...TTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGGCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp CATCTCTCTCCGTCGCCTCAGGCCTCCCTCTTTAATATTAAGGGGTCTTCCACTTCCATTTTAACGCCATaGGAGCTGCTGCTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: HLSPSPQASLFNIKGSSTSILTP*ELLLCC
Trigger: GCAGCACAGCAGCAGCTCCAATGGCGTTAAAATGGA...AGTGGAAGACCCCTTAATATTAAAGAGGGAGGCCTGAGGCGACGGAGAGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS GCA 90 bp CCCATATCAGGGACGTGTCCTCCTGGAAATGATCCTCCTGTTCGCTaGAATGCCCTACGAGCATTTTCTCCATCAGGATCCTTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: PISGTCPPGNDPPVR*NALRAFSPSGSFLS
Trigger: AGAGAGAAAGGATCCTGATGGAGAAAATGCTCGTAGGGCATTGCAGCGAACAGGAGGATCATTTCCAGGAGGACACGTCCCTGATATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559862.5
CDS CCA 90 bp ATACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTaGCTGGCACTAATAGGCTGTCCACCCGGACCAAGTCCCATCCCA +
Preference number: 5 (lower is better)
Translates to: IPPGPKFPITPPMFN*LALIGCPPGPSPIP
Trigger: TGGGATGGGACTTGGTCCGGGTGGACAGCCTATTAGTGCCAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560513.1
ENST00000561301.5
ENST00000616409.4
CDS CCA 90 bp ATTCCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTaGCTGGCACTAATAGGCTGTCCACCCGGACCAAGTCCCATCCCA +
Preference number: 5 (lower is better)
Translates to: IPPGPKFPITPPMFN*LALIGCPPGPSPIP
Trigger: TGGGATGGGACTTGGTCCGGGTGGACAGCCTATTAGTGCCAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558395.1
CDS-3UTR CAA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGCCGGGCACCTCGGCCTaGTTGGCGTCCGCCATCCCG +
Preference number: 5 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLEPGTSA*LASAIP
Trigger: CGGGATGGCGGACGCCAACAAGGCCGAGGTGCCCGG...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp CCCCATCTCTCTCCGTCGCCTCAGGCCTCCCTCTTTAATATTAAGGGGTCTTCCAAACTCTGTTACGATTaGGACCCTTCTTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: PHLSPSPQASLFNIKGSSKLCYD*DPSFLQ
Trigger: CTGGAGAAAAGAAGGGTCCAAATCGTAACAGAGTTT...GGAAGACCCCTTAATATTAAAGAGGGAGGCCTGAGGCGACGGAGAGAGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS-3UTR CAA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGTGCAGTGAGCCGAGATaGCGCCACGGCACTCCAGCA +
Preference number: 5 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLCSEPR*RHGTPA
Trigger: TGCTGGAGTGCCGTGGCGCAATCTCGGCTCACTGCA...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS CCA 90 bp TCCTCGATCCATATCGATGCTCCTTTCCAGTATAGCTCCTATACCTaGTCCCATTCTATCAAAGCTGGAACTCATCCGGTCCAGTCCCAT +
Preference number: 5 (lower is better)
Translates to: SSIHIDAPFQYSSYT*SHSIKAGTHPVQSH
Trigger: ATGGGACTGGACCGGATGAGTTCCAGCTTTGATAGAATGGGACCAGGTATAGGAGCTATACTGGAAAGGAGCATCGATATGGATCGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000558289.5
ENST00000558395.1
ENST00000560513.1
ENST00000560530.5
ENST00000616409.4
ENST00000620867.4
CDS-3UTR CAA 90 bp TATGTTCAACTGGCTGGCACTAATAGGCTGTCCACCCGGACCAAGTCCCATCCCTTCTTCCAACCAACTTaGAAGTCAAGATTGGCAACA +
Preference number: 5 (lower is better)
Translates to: YVQLAGTNRLSTRTKSHPFFQPT*KSRLAT
Trigger: TGTTGCCAATCTTGACTTCAAAGTTGGTTGGAAGAA...GGGATGGGACTTGGTCCGGGTGGACAGCCTATTAGTGCCAGCCAGTTGAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp AGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACAAAGACACCTCCTCTTGCTGCGCCTGTCTaGCCAAAGCTATGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: RKHHQDYMGPEKGTKTPPLAAPV*PKLWRE
Trigger: TTCTCTCCATAGCTTTGGCAAGACAGGCGCAGCAAG...AGGAGGTGTCTTTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp CCAAGTCTACCGGCCTGCAAATTACTGATGACTTCAGGAGGAATGTTTGGATTATCCATTTTAACGCCATaGGAGCTGCTGCTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: PSLPACKLLMTSGGMFGLSILTP*ELLLCC
Trigger: GCAGCACAGCAGCAGCTCCAATGGCGTTAAAATGGA...TAATCCAAACATTCCTCCTGAAGTCATCAGTAATTTGCAGGCCGGTAGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp TATGTTCAACTGGCTGGCACTAATAGGCTGTCCACCCGGACCAAGTCCCATCCCGAACATAGAAATTGCTaGAACTGCTTCAATTGCTTG +
Preference number: 5 (lower is better)
Translates to: YVQLAGTNRLSTRTKSHPEHRNC*NCFNCL
Trigger: CAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTC...GGGATGGGACTTGGTCCGGGTGGACAGCCTATTAGTGCCAGCCAGTTGAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp TCTCCGTCGCCTCAGGCCTCCCTCTTTAATATTAAGGGGTCTTCCACTAAGATCGATGTTTTAATTGTTTaGGGGCACCATCAACCGTGC +
Preference number: 5 (lower is better)
Translates to: SPSPQASLFNIKGSSTKIDVLIV*GHHQPC
Trigger: GCACGGTTGATGGTGCCCCAAAACAATTAAAACATC...GATCTTAGTGGAAGACCCCTTAATATTAAAGAGGGAGGCCTGAGGCGACGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS-3UTR CAA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGGTAACGGATCCCGATTaGAAAAGGCCCCGAGCGCTC +
Preference number: 5 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLVTDPD*KRPRAL
Trigger: GAGCGCTCGGGGCCTTTTCAAATCGGGATCCGTTAC...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267836.10
CDS-3UTR CAA 90 bp AGGAAGCATCACCAAGACTATATGGGGCCAGAAAAAGGAACAAAGACACCTCCTCAAACCCTCCAATCATaGCACTGCCAAGTCTACCAA +
Preference number: 5 (lower is better)
Translates to: RKHHQDYMGPEKGTKTPPQTLQS*HCQVYQ
Trigger: TTGGTAGACTTGGCAGTGCAATGATTGGAGGGTTTG...AGGAGGTGTCTTTGTTCCTTTTTCTGGCCCCATATAGTCTTGGTGATGCTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTTCCATTTTAACGCCATaGGAGCTGCTGCTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLSILTP*ELLLCC
Trigger: GCAGCACAGCAGCAGCTCCAATGGCGTTAAAATGGA...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CAA 90 bp TACTCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTGGCTGAACTGCTTCAATTGCTaGCTCAAAAGTGACAGTGCC +
Preference number: 5 (lower is better)
Translates to: YSPPGPKFPITPPMFNWLNCFNC*LKSDSA
Trigger: GGCACTGTCACTTTTGAGCAAGCAATTGAAGCAGTT...CAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCCTCCCATGCTATTCATaGCTTCCAGACCACCAAACC +
Preference number: 5 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCLPCYS*LPDHQT
Trigger: GGTTTGGTGGTCTGGAAGCAATGAATAGCATGGGAG...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CAA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTAGGCAGGAGAATTGTTaGAATCCAGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLRQENC*NPGGGG
Trigger: ACCTCCGCCTCCTGGATTCAAACAATTCTCCTGCCT...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAAAAGAAATGCAGTCCTaGCTGCGCCTGTCTTGCCAA +
Preference number: 5 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSKEMQS*LRLSCQ
Trigger: TTGGCAAGACAGGCGCAGCAAGGACTGCATTTCTTT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAACTGCTCACCTTGCCTaGGTTAGAAGTGTTCATGGC +
Preference number: 5 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSTAHLA*VRSVHG
Trigger: GCCATGAACACTTCTAACCAAGGCAAGGTGAGCAGT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS GCA 90 bp TATTCCAGATCCTACTGGACCCATGTTAGAAGATCCTATTCTTCCTaGAAACCCTCCAATCATTGCACTGCCAAGTCTACCAAAGGAATC +
Preference number: 5 (lower is better)
Translates to: YSRSYWTHVRRSYSS*KPSNHCTAKSTKGI
Trigger: GATTCCTTTGGTAGACTTGGCAGTGCAATGATTGGAGGGTTTGCAGGAAGAATAGGATCTTCTAACATGGGTCCAGTAGGATCTGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324324.12
ENST00000616409.4
CDS-3UTR CAA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTCCATTTTAACGCCATaGGAGCTGCTGCTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLSILTP*ELLLCC
Trigger: GCAGCACAGCAGCAGCTCCAATGGCGTTAAAATGGA...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CAA 90 bp TACTCACCACCTGGACCTAAATTTCCCATTACTCCACCTATGTTCAACTGGCTGAAACTCTGTTACGATTaGGACCCTTCTTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: YSPPGPKFPITPPMFNWLKLCYD*DPSFLQ
Trigger: CTGGAGAAAAGAAGGGTCCAAATCGTAACAGAGTTT...CAGCCAGTTGAACATAGGTGGAGTAATGGGAAATTTAGGTCCAGGTGGTGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGCCACACCACAACCCCTaGATTTTCCTTCCGCATCCT +
Preference number: 5 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLPHHNP*IFLPHP
Trigger: AGGATGCGGAAGGAAAATCAAGGGGTTGTGGTGTGG...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CAA 90 bp TCTCTCCGTCGCCTCAGGCCTCCCTCTTTAATATTAAGGGGTCTTCCACTAAGACCACTAAGATCATATTaGTTCATAGTTTCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: SLRRLRPPSLILRGLPLRPLRSY*FIVSRA
Trigger: AGCCCTAGAAACTATGAACAAATATGATCTTAGTGG...TCTTAGTGGAAGACCCCTTAATATTAAAGAGGGAGGCCTGAGGCGACGGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561151.1
CDS-3UTR CAA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCTCATTCCGCTTCCCATaGGACCCGATAAAAATCCTC +
Preference number: 5 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCSFRFP*DPIKIL
Trigger: GAGGATTTTTATCGGGTCCAATGGGAAGCGGAATGA...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CAA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCACTAGCTACTGCTGCTaGGCCATAATCCACTACAGT +
Preference number: 5 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCTSYCC*AIIHYS
Trigger: ACTGTAGTGGATTATGGCCAAGCAGCAGTAGCTAGT...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTTGGAGAACCATAACCTaGCAGCACGGCGTAATACCT +
Preference number: 5 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLWRTIT*QHGVIP
Trigger: AGGTATTACGCCGTGCTGCAAGGTTATGGTTCTCCA...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCAACTGCTTCAATTGCTaGCTCAAAAGTGACAGTGCC +
Preference number: 5 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCNCFNC*LKSDSA
Trigger: GGCACTGTCACTTTTGAGCAAGCAATTGAAGCAGTT...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CAA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGACTCCCATGCTATTCATaGCTTCCAGACCACCAAACC +
Preference number: 5 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRLPCYS*LPDHQT
Trigger: GGTTTGGTGGTCTGGAAGCAATGAATAGCATGGGAG...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTTCATTCCGCTTCCCATaGGACCCGATAAAAATCCTC +
Preference number: 5 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLSFRFP*DPIKIL
Trigger: GAGGATTTTTATCGGGTCCAATGGGAAGCGGAATGA...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR CAA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCAATATCTGGTTGCCTTaGGAGCCTATTCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCNIWLP*EPILSL
Trigger: GAGAGAGAGAATAGGCTCCAAAGGCAACCAGATATT...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CAA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAGCATACCAGACACAATaGCAAGTGTGTTGGTTGCAA +
Preference number: 5 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSAYQTQ*QVCWLQ
Trigger: TTGCAACCAACACACTTGCAATTGTGTCTGGTATGC...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTAAGGGAGCATTTAAATaGGGCCTTGCTGGACAGGAA +
Preference number: 5 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLKGAFK*GLAGQE
Trigger: TTCCTGTCCAGCAAGGCCCAATTTAAATGCTCCCTT...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGGGGTTACTGCTCACCTaGCCTTGGTTAGAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLGLLLT*PWLEVF
Trigger: GAACACTTCTAACCAAGGCAAGGTGAGCAGTAACCC...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCGTTTCCCAACTCCTGTaGTCCATTAAAGCCACAACA +
Preference number: 5 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCVSQLL*SIKATT
Trigger: TGTTGTGGCTTTAATGGACAACAGGAGTTGGGAAAC...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTCTCAACACTATCATGTaGGCCCCTATTCAGAGACTG +
Preference number: 5 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLLNTIM*APIQRL
Trigger: CAGTCTCTGAATAGGGGCCAACATGATAGTGTTGAG...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGTCCATTTTAACGCCATaGGAGCTGCTGCTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLESILTP*ELLLCC
Trigger: GCAGCACAGCAGCAGCTCCAATGGCGTTAAAATGGA...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCAAACTCTGTTACGATTaGGACCCTTCTTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCKLCYD*DPSFLQ
Trigger: CTGGAGAAAAGAAGGGTCCAAATCGTAACAGAGTTT...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CAA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCCCACACCACAACCCCTaGATTTTCCTTCCGCATCCT +
Preference number: 5 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFPHHNP*IFLPHP
Trigger: AGGATGCGGAAGGAAAATCAAGGGGTTGTGGTGTGG...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTGATTGGCAACAAAAATaGTGGAACCAAGTCTACCGG +
Preference number: 5 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLDWQQK*WNQVYR
Trigger: CCGGTAGACTTGGTTCCACAATTTTTGTTGCCAATC...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CAA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCCTGCTCTTGCCATCTTaGTCTTCTTTAATATCTGCC +
Preference number: 5 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCLLLPS*SSLISA
Trigger: GGCAGATATTAAAGAAGACAAAGATGGCAAGAGCAG...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CAA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCATGGGATCCAATGTGTTaGATATGTTGTGCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSWDPMC*ICCALV
Trigger: TACCAAGGCACAACATATCAAACACATTGGATCCCA...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCAAGGAGCTCTATTTTaGGGAAAACAATGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLQGALF*GKQWVL
Trigger: GAGCACCCATTGTTTTCCCAAAAATAGAGCTCCTTG...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGCACAAATGGGACAGATaGCCAAAATGTGGTGAGGAC +
Preference number: 5 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLHKWDR*PKCGED
Trigger: GTCCTCACCACATTTTGGCAATCTGTCCCATTTGTG...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGGATTGGCAACAAAAATaGTGGAACCAAGTCTACCGG +
Preference number: 5 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLDWQQK*WNQVYR
Trigger: CCGGTAGACTTGGTTCCACAATTTTTGTTGCCAATC...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CAA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCATTCTTCCAACCAACTTaGAAGTCAAGATTGGCAACA +
Preference number: 5 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSFFQPT*KSRLAT
Trigger: TGTTGCCAATCTTGACTTCAAAGTTGGTTGGAAGAA...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGAAACTGCTTCAATTGCTaGCTCAAAAGTGACAGTGCC +
Preference number: 5 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRNCFNC*LKSDSA
Trigger: GGCACTGTCACTTTTGAGCAAGCAATTGAAGCAGTT...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGAATATCTGGTTGCCTTaGGAGCCTATTCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLNIWLP*EPILSL
Trigger: GAGAGAGAGAATAGGCTCCAAAGGCAACCAGATATT...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR CAA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCTGTTCCAACCATGGCTaGAAATTATGCATTACGATC +
Preference number: 5 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCCSNHG*KLCITI
Trigger: GATCGTAATGCATAATTTCAAGCCATGGTTGGAACA...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CAA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCATGTTCCAACCATGGCTaGAAATTATGCATTACGATC +
Preference number: 5 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSCSNHG*KLCITI
Trigger: GATCGTAATGCATAATTTCAAGCCATGGTTGGAACA...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCTGCCTATTATCATACTaGGGGCTTGCTACATTATCA +
Preference number: 5 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCCLLSY*GLATLS
Trigger: TGATAATGTAGCAAGCCCCAAGTATGATAATAGGCA...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CAA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTTGGGATCCAATGTGTTaGATATGTTGTGCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLWDPMC*ICCALV
Trigger: TACCAAGGCACAACATATCAAACACATTGGATCCCA...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR CAA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGTGGGATCCAATGTGTTaGATATGTTGTGCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLWDPMC*ICCALV
Trigger: TACCAAGGCACAACATATCAAACACATTGGATCCCA...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CAA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTCACAGGTTATATACATaGCATAACTCCAGAGGACAC +
Preference number: 5 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLHRLYT*HNSRGH
Trigger: GTGTCCTCTGGAGTTATGCAATGTATATAACCTGTG...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS TCA 90 bp ACGATTTGGACCCTTCTTTTCTCCAGCGCCCGAATTCTTGTCTTTTaGATAAGGATGAAATCTATTGGCCTTCTTACTTCCTGTAGATTT +
Preference number: 5 (lower is better)
Translates to: TIWTLLFSSARILVF*IRMKSIGLLTSCRF
Trigger: AAATCTACAGGAAGTAAGAAGGCCAATAGATTTCATCCTTATTCAAAAGACAAGAATTCGGGCGCTGGAGAAAAGAAGGGTCCAAATCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000559862.5
ENST00000560157.1
ENST00000561151.1
ENST00000561351.5
ENST00000610570.4
ENST00000616409.4
CDS-3UTR CAA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCACCACTAAGATCATATTaGTTCATAGTTTCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSPLRSY*FIVSRA
Trigger: AGCCCTAGAAACTATGAACAAATATGATCTTAGTGG...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp AAAGTGCTATGCCATAGCAGCTGTCTAATCATGAATCTTCAAAAGGGTTTCTTTGATTGGCAACAAAAATaGTGGAACCAAGTCTACCGG +
Preference number: 5 (lower is better)
Translates to: KVLCHSSCLIMNLQKGFFDWQQK*WNQVYR
Trigger: CCGGTAGACTTGGTTCCACAATTTTTGTTGCCAATC...AAAGAAACCCTTTTGAAGATTCATGATTAGACAGCTGCTATGGCATAGCACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTTTCTTCCAACCAACTTaGAAGTCAAGATTGGCAACA +
Preference number: 5 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLFFQPT*KSRLAT
Trigger: TGTTGCCAATCTTGACTTCAAAGTTGGTTGGAAGAA...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CAA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGCTGCTCTTGCCATCTTaGTCTTCTTTAATATCTGCC +
Preference number: 5 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLLLLPS*SSLISA
Trigger: GGCAGATATTAAAGAAGACAAAGATGGCAAGAGCAG...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CAA 90 bp AAAGTGCTATGCCATAGCAGCTGTCTAATCATGAATCTTCAAAAGGGTTTCTTTAACTGCTTCAATTGCTaGCTCAAAAGTGACAGTGCC +
Preference number: 5 (lower is better)
Translates to: KVLCHSSCLIMNLQKGFFNCFNC*LKSDSA
Trigger: GGCACTGTCACTTTTGAGCAAGCAATTGAAGCAGTT...AAAGAAACCCTTTTGAAGATTCATGATTAGACAGCTGCTATGGCATAGCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCTCATTCCGCTTCCCATaGGACCCGATAAAAATCCTC +
Preference number: 5 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFSFRFP*DPIKIL
Trigger: GAGGATTTTTATCGGGTCCAATGGGAAGCGGAATGA...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGTGTTCCAACCATGGCTaGAAATTATGCATTACGATC +
Preference number: 5 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLCSNHG*KLCITI
Trigger: GATCGTAATGCATAATTTCAAGCCATGGTTGGAACA...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CAA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCTATCATACTTGGGGCTaGCTACATTATCAGTTCTAT +
Preference number: 5 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCYHTWG*LHYQFY
Trigger: ATAGAACTGATAATGTAGCAAGCCCCAAGTATGATA...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CAA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGTGCCTATTATCATACTaGGGGCTTGCTACATTATCA +
Preference number: 5 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLCLLSY*GLATLS
Trigger: TGATAATGTAGCAAGCCCCAAGTATGATAATAGGCA...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CAA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCAAACTAGACAGAAAGTaGGGAATAGTCTGCCTATTA +
Preference number: 5 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCKLDRK*GIVCLL
Trigger: TAATAGGCAGACTATTCCCAACTTTCTGTCTAGTTT...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CAA 90 bp GGGATAGTGACTGTGAGAGTATCCAAGCTAATTCTTCCTCCATTAGGGAAATCAAAACTAGACAGAAAGTaGGGAATAGTCTGCCTATTA +
Preference number: 5 (lower is better)
Translates to: GIVTVRVSKLILPPLGKSKLDRK*GIVCLL
Trigger: TAATAGGCAGACTATTCCCAACTTTCTGTCTAGTTT...TGATTTCCCTAATGGAGGAAGAATTAGCTTGGATACTCTCACAGTCACTATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGGGATCCAATGTGTTaGATATGTTGTGCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLWDPMC*ICCALV
Trigger: TACCAAGGCACAACATATCAAACACATTGGATCCCA...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000560172.5
ENST00000620867.4
CDS-3UTR CAA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGTGTTTTCACACTACATaGGCAAAGCTGAATAACTGC +
Preference number: 5 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLCFHTT*AKLNNC
Trigger: GCAGTTATTCAGCTTTGCCAATGTAGTGTGAAAACA...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp TTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCACAGGAGATGTCCAATaGACACTTCATAAACACTAT +
Preference number: 5 (lower is better)
Translates to: LAVHFNGWKLDRKLGIVCTGDVQ*TLHKHY
Trigger: ATAGTGTTTATGAAGTGTCAATTGGACATCTCCTGT...GCAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp AAAGTGCTATGCCATAGCAGCTGTCTAATCATGAATCTTCAAAAGGGTTTCTTTAAACTCTGTTACGATTaGGACCCTTCTTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: KVLCHSSCLIMNLQKGFFKLCYD*DPSFLQ
Trigger: CTGGAGAAAAGAAGGGTCCAAATCGTAACAGAGTTT...AAAGAAACCCTTTTGAAGATTCATGATTAGACAGCTGCTATGGCATAGCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp AAACTGCCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAACTGCTCTTGCCATCTTaGTCTTCTTTAATATCTGCC +
Preference number: 5 (lower is better)
Translates to: KLPIEHRNCLNCFNCLLKLLLPS*SSLISA
Trigger: GGCAGATATTAAAGAAGACAAAGATGGCAAGAGCAG...TTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGGCAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp TTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGGAACATAGAAATTGCTaGAACTGCTTCAATTGCTTG +
Preference number: 5 (lower is better)
Translates to: FSSSLQWLETRQKVGNSLEHRNC*NCFNCL
Trigger: CAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTC...CAGACTATTCCCAACTTTCTGTCTAGTTTCCAGCCATTGAAGTGAACTGCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CAA 90 bp GATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTAAACTAGACAGAAAGTaGGGAATAGTCTGCCTATTA +
Preference number: 5 (lower is better)
Translates to: DMAMSNIVGSNVFDMLCLKLDRK*GIVCLL
Trigger: TAATAGGCAGACTATTCCCAACTTTCTGTCTAGTTT...AAGGCACAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CAA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGACAATTGCAAGTGTGTaGGTTGCAAGAAAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLTIASV*VARKGK
Trigger: CTTACCTTTTCTTGCAACCAACACACTTGCAATTGT...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp ATAACTTACCATATTACAGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGATACATATATCCTGGTTaGGATGGTCACAATAACTGG +
Preference number: 5 (lower is better)
Translates to: ITYHITGLNTIMLAPIQRYIYPG*DGHNNW
Trigger: CCAGTTATTGTGACCATCCAAACCAGGATATATGTA...TCTCTGAATAGGGGCCAACATGATAGTGTTGAGACCTGTAATATGGTAAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCAAACTCTGTTACGATTaGGACCCTTCTTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFKLCYD*DPSFLQ
Trigger: CTGGAGAAAAGAAGGGTCCAAATCGTAACAGAGTTT...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGCCACTAAGATCATATTaGTTCATAGTTTCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLPLRSY*FIVSRA
Trigger: AGCCCTAGAAACTATGAACAAATATGATCTTAGTGG...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267836.10
ENST00000324324.12
CDS-3UTR CAA 90 bp AATGTAAAACACAGCTACACAGGTTATATACATTGCATAACTCCAGAGGACACCGAACATAGAAATTGCTaGAACTGCTTCAATTGCTTG +
Preference number: 5 (lower is better)
Translates to: NVKHSYTGYIHCITPEDTEHRNC*NCFNCL
Trigger: CAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTC...GGTGTCCTCTGGAGTTATGCAATGTATATAACCTGTGTAGCTGTGTTTTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp AAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTATCATACTTGGGGCTaGCTACATTATCAGTTCTAT +
Preference number: 5 (lower is better)
Translates to: KGDMAMSNIVGSNVFDMLYHTWG*LHYQFY
Trigger: ATAGAACTGATAATGTAGCAAGCCCCAAGTATGATA...CAACATATCAAACACATTGGATCCCACGATGTTAGACATAGCCATATCTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000620867.4
CDS-3UTR CAA 90 bp AAAGTGCTATGCCATAGCAGCTGTCTAATCATGAATCTTCAAAAGGGTTTCTTTCCACTAAGATCATATTaGTTCATAGTTTCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: KVLCHSSCLIMNLQKGFFPLRSY*FIVSRA
Trigger: AGCCCTAGAAACTATGAACAAATATGATCTTAGTGG...AAAGAAACCCTTTTGAAGATTCATGATTAGACAGCTGCTATGGCATAGCACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp AAACTGCCCATTGAACATAGAAATTGCTTGAACTGCTTCAATTGCTTGCTCAAAGAACATAGAAATTGCTaGAACTGCTTCAATTGCTTG +
Preference number: 5 (lower is better)
Translates to: KLPIEHRNCLNCFNCLLKEHRNC*NCFNCL
Trigger: CAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTC...TTTGAGCAAGCAATTGAAGCAGTTCAAGCAATTTCTATGTTCAATGGGCAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCTGCCTATTATCATACTaGGGGCTTGCTACATTATCA +
Preference number: 5 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFCLLSY*GLATLS
Trigger: TGATAATGTAGCAAGCCCCAAGTATGATAATAGGCA...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCTTGCAAGTGTGTTGGTaGCAAGAAAAGGTAAGAACT +
Preference number: 5 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFLQVCW*QEKVRT
Trigger: AGTTCTTACCTTTTCTTGCAACCAACACACTTGCAA...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCTTACTTAATGGCACATaGGTTGAAGCTTGGCAAACT +
Preference number: 5 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFLLNGT*VEAWQT
Trigger: AGTTTGCCAAGCTTCAACCAATGTGCCATTAAGTAA...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS-3UTR CAA 90 bp TTATCAGACAAGAAAGCAAAATTCACTAGTAACACCCACAACATTCAGTTAGAGCCACTAAGATCATATTaGTTCATAGTTTCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: LSDKKAKFTSNTHNIQLEPLRSY*FIVSRA
Trigger: AGCCCTAGAAACTATGAACAAATATGATCTTAGTGG...CTCTAACTGAATGTTGTGGGTGTTACTAGTGAATTTTGCTTTCTTGTCTGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561351.5
ENST00000610570.4
CDS-3UTR CAA 90 bp TTAACCTCATCACAATTGCTGATTGAGTTCTTCTCACTAGTTTGCAATTTCTTCGGGGCTTTACTGCTTTaGATATATGGATTGTATGTT +
Preference number: 5 (lower is better)
Translates to: LTSSQLLIEFFSLVCNFFGALLL*IYGLYV
Trigger: AACATACAATCCATATATCAAAAGCAGTAAAGCCCC...GAAGAAATTGCAAACTAGTGAGAAGAACTCAATCAGCAATTGTGATGAGGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324324.12
CDS CCA 72 bp GCTCTGCGGGCTGCAGGTGCGGGCTGTCGCCACCAGTaGCCCCGGGCACCTCGGCCTTGTTGGCGTCCGCCA +
Preference number: 6 (lower is better)
Translates to: ALRAAGAGCRHQ*PRAPRPCWRPP
Trigger: TGGCGGACGCCAACAAGGCCGAGGTGCCCGGGGCCACTGGTGGCGACAGCCCGCACCTGCAGCCCGCAGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000559862.5
ENST00000561151.1
ENST00000561351.5
ENST00000610570.4
CDS GCA 72 bp TTAACGCCATTGGAGCTGCTGCTGTGCTGCGGCTGCTaGTTCTCCGCCTCCGCGGGGTGCGGCTCTCGCCGC +
Preference number: 6 (lower is better)
Translates to: LTPLELLLCCGC*FSASAGCGSRR
Trigger: GCGGCGAGAGCCGCACCCCGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAGCAGCAGCTCCAATGGCGTTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000559862.5
ENST00000561151.1
ENST00000561351.5
ENST00000610570.4
CDS GCA 72 bp TCATTCTCCATTTTAACGCCATTGGAGCTGCTGCTGTaGTGCGGCTGCTGCTTCTCCGCCTCCGCGGGGTGC +
Preference number: 6 (lower is better)
Translates to: SFSILTPLELLL*CGCCFSASAGC
Trigger: GCACCCCGCGGAGGCGGAGAAGCAGCAGCCGCAGCACAGCAGCAGCTCCAATGGCGTTAAAATGGAGAATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000559862.5
ENST00000561151.1
ENST00000561351.5
ENST00000610570.4
ENST00000616409.4
CDS CAA 72 bp TTCGGCCAACTCCTCCAAATCCTCCCATGCTATTCATaGCTTCCAGACCACCAAACCCTATTCCACCTGGAC +
Preference number: 6 (lower is better)
Translates to: FGQLLQILPCYS*LPDHQTLFHLD
Trigger: GTCCAGGTGGAATAGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGGAGGATTTGGAGGAGTTGGCCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558395.1
CDS CAA 72 bp TCTTTTGCTGATTCATCATTCTCCATTTTAACGCCATaGGAGCTGCTGCTGTGCTGCGGCTGCTGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SFADSSFSILTP*ELLLCCGCCFS
Trigger: GGAGAAGCAGCAGCCGCAGCACAGCAGCAGCTCCAATGGCGTTAAAATGGAGAATGATGAATCAGCAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000559862.5
ENST00000561151.1
ENST00000561351.5
ENST00000610570.4
ENST00000616409.4
CDS CAA 90 bp TCTGGTTGCCTTTGGAGCCTATTCTCTCTCTCATTCCGCTTCCCATaGGACCCGATAAAAATCCTCGATCCATATCGATGCTCCTTTCCA +
Preference number: 6 (lower is better)
Translates to: SGCLWSLFSLSFRFP*DPIKILDPYRCSFP
Trigger: TGGAAAGGAGCATCGATATGGATCGAGGATTTTTATCGGGTCCAATGGGAAGCGGAATGAGAGAGAGAATAGGCTCCAAAGGCAACCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000558289.5
ENST00000558395.1
ENST00000559057.1
ENST00000560172.5
ENST00000560530.5
ENST00000616409.4
ENST00000620867.4
CDS GCA 72 bp TCCTACTGGACCCATGTTAGAAGATCCTATTCTTCCTaGAAACCCTCCAATCATTGCACTGCCAAGTCTACC +
Preference number: 6 (lower is better)
Translates to: SYWTHVRRSYSS*KPSNHCTAKST
Trigger: GGTAGACTTGGCAGTGCAATGATTGGAGGGTTTGCAGGAAGAATAGGATCTTCTAACATGGGTCCAGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324324.12
ENST00000616409.4
CDS CCA 72 bp CATATCGATGCTCCTTTCCAGTATAGCTCCTATACCTaGTCCCATTCTATCAAAGCTGGAACTCATCCGGTC +
Preference number: 6 (lower is better)
Translates to: HIDAPFQYSSYT*SHSIKAGTHPV
Trigger: GACCGGATGAGTTCCAGCTTTGATAGAATGGGACCAGGTATAGGAGCTATACTGGAAAGGAGCATCGATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000558289.5
ENST00000558395.1
ENST00000560172.5
ENST00000560513.1
ENST00000560530.5
ENST00000616409.4
ENST00000620867.4
CDS CAA 72 bp CTTTGGAGCCTATTCTCTCTCTCATTCCGCTTCCCATaGGACCCGATAAAAATCCTCGATCCATATCGATGC +
Preference number: 6 (lower is better)
Translates to: LWSLFSLSFRFP*DPIKILDPYRC
Trigger: GCATCGATATGGATCGAGGATTTTTATCGGGTCCAATGGGAAGCGGAATGAGAGAGAGAATAGGCTCCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000558289.5
ENST00000558395.1
ENST00000559057.1
ENST00000560172.5
ENST00000560530.5
ENST00000616409.4
ENST00000620867.4
CDS CAA 90 bp CAAGTCAAGTCAAAAGGTAGATTTCTGACAAATATCTGGTTGCCTTaGGAGCCTATTCTCTCTCTCATTCCGCTTCCCATTGGACCCGAT +
Preference number: 6 (lower is better)
Translates to: QVKSKGRFLTNIWLP*EPILSLIPLPIGPD
Trigger: ATCGGGTCCAATGGGAAGCGGAATGAGAGAGAGAATAGGCTCCAAAGGCAACCAGATATTTGTCAGAAATCTACCTTTTGACTTGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000558289.5
ENST00000558395.1
ENST00000560172.5
ENST00000560530.5
ENST00000616409.4
ENST00000620867.4
CDS CCA 72 bp CATGCTACCCATTCCACCACTTATTCCAGATCCTACTaGACCCATGTTAGAAGATCCTATTCTTCCTGCAAA +
Preference number: 6 (lower is better)
Translates to: HATHSTTYSRSY*THVRRSYSSCK
Trigger: TTTGCAGGAAGAATAGGATCTTCTAACATGGGTCCAGTAGGATCTGGAATAAGTGGTGGAATGGGTAGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324324.12
ENST00000616409.4
CDS CCA 72 bp ATATGGGATGTTGCTAATGAAAACTCTGTTACGATTTaGACCCTTCTTTTCTCCAGCGCCCGAATTCTTGTC +
Preference number: 6 (lower is better)
Translates to: IWDVANENSVTI*TLLFSSARILV
Trigger: GACAAGAATTCGGGCGCTGGAGAAAAGAAGGGTCCAAATCGTAACAGAGTTTTCATTAGCAACATCCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000559862.5
ENST00000560157.1
ENST00000561151.1
ENST00000561351.5
ENST00000610570.4
ENST00000616409.4
CDS TCA 72 bp ACCCTTCTTTTCTCCAGCGCCCGAATTCTTGTCTTTTaGATAAGGATGAAATCTATTGGCCTTCTTACTTCC +
Preference number: 6 (lower is better)
Translates to: TLLFSSARILVF*IRMKSIGLLTS
Trigger: GGAAGTAAGAAGGCCAATAGATTTCATCCTTATTCAAAAGACAAGAATTCGGGCGCTGGAGAAAAGAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000559862.5
ENST00000560157.1
ENST00000561151.1
ENST00000561351.5
ENST00000610570.4
ENST00000616409.4
CDS CAA 72 bp GACCCTTCTTTTCTCCAGCGCCCGAATTCTTGTCTTTaGAATAAGGATGAAATCTATTGGCCTTCTTACTTC +
Preference number: 6 (lower is better)
Translates to: DPSFLQRPNSCL*NKDEIYWPSYF
Trigger: GAAGTAAGAAGGCCAATAGATTTCATCCTTATTCAAAAGACAAGAATTCGGGCGCTGGAGAAAAGAAGGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000559862.5
ENST00000560157.1
ENST00000561151.1
ENST00000561351.5
ENST00000610570.4
ENST00000616409.4
CDS CAA 72 bp TCAAAAGGTAGATTTCTGACAAATATCTGGTTGCCTTaGGAGCCTATTCTCTCTCTCATTCCGCTTCCCATT +
Preference number: 6 (lower is better)
Translates to: SKGRFLTNIWLP*EPILSLIPLPI
Trigger: AATGGGAAGCGGAATGAGAGAGAGAATAGGCTCCAAAGGCAACCAGATATTTGTCAGAAATCTACCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000558289.5
ENST00000558395.1
ENST00000560172.5
ENST00000560530.5
ENST00000616409.4
ENST00000620867.4
CDS CAA 90 bp CTTAATATTTATTTGCTTACATTTCTGACAAATATCTGGTTGCCTTaGGAGCCTATTCTCTCTCTCATTCCGCTTCCCATTGGACCCGAT +
Preference number: 6 (lower is better)
Translates to: LNIYLLTFLTNIWLP*EPILSLIPLPIGPD
Trigger: ATCGGGTCCAATGGGAAGCGGAATGAGAGAGAGAATAGGCTCCAAAGGCAACCAGATATTTGTCAGAAATGTAAGCAAATAAATATTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559057.1
CDS CAA 72 bp TATTTGCTTACATTTCTGACAAATATCTGGTTGCCTTaGGAGCCTATTCTCTCTCTCATTCCGCTTCCCATT +
Preference number: 6 (lower is better)
Translates to: YLLTFLTNIWLP*EPILSLIPLPI
Trigger: AATGGGAAGCGGAATGAGAGAGAGAATAGGCTCCAAAGGCAACCAGATATTTGTCAGAAATGTAAGCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559057.1
CDS CAA 72 bp TCTTTAATAGCTTGCCATTTCATGTCATATGGGATGTaGCTAATGAAAACTCTGTTACGATTTGGACCCTTC +
Preference number: 6 (lower is better)
Translates to: SLIACHFMSYGM*LMKTLLRFGPF
Trigger: GAAGGGTCCAAATCGTAACAGAGTTTTCATTAGCAACATCCCATATGACATGAAATGGCAAGCTATTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000559862.5
ENST00000560157.1
ENST00000561151.1
ENST00000561351.5
ENST00000610570.4
ENST00000616409.4
CDS CAA 90 bp CTCATTAGATCTTTAATAGCTTGCCATTTCATGTCATATGGGATGTaGCTAATGAAAACTCTGTTACGATTTGGACCCTTCTTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: LIRSLIACHFMSYGM*LMKTLLRFGPFFSP
Trigger: TGGAGAAAAGAAGGGTCCAAATCGTAACAGAGTTTTCATTAGCAACATCCCATATGACATGAAATGGCAAGCTATTAAAGATCTAATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000267836.10
ENST00000324324.12
ENST00000559862.5
ENST00000560157.1
ENST00000561151.1
ENST00000561351.5
ENST00000610570.4
ENST00000616409.4
CDS TCA 72 bp AGATTAATTTTGAGATCCAACTGTCAGTCATGTAGCTaGAAGGTACGTTTTGTAAATGTTAAATCTCACCAG +
Preference number: 6 (lower is better)
Translates to: RLILRSNCQSCS*KVRFVNVKSHQ
Trigger: CTGGTGAGATTTAACATTTACAAAACGTACCTTTCAGCTACATGACTGACAGTTGGATCTCAAAATTAATCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560530.5