Pregenerated sensors for MUCL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000172551Ensembl transcript IDs: ENST00000308796.11, ENST00000546809.5, ENST00000547958.1, ENST00000547990.1, ENST00000619042.1, ENST00000652289.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTGATTAGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCAATAGTTGTGACCAATTaGAGAAGACTCAAGCTGATT | + |
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Preference number: 2 (lower is better) Translates to: LIRDKGDIVGKVSSWMKSIVVTN*RRLKLI Trigger: AATCAGCTTGAGTCTTCTGCAATTGGTCACAACTAT...TGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCTAATCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| 3UTR-3UTR GCA 90 bp | ATTAGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGATAGTTGTGACCAATTaGAGAAGACTCAAGCTGATT | + |
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Preference number: 2 (lower is better) Translates to: IRDKGDIVGKVSSWMKSQIVVTN*RRLKLI Trigger: AATCAGCTTGAGTCTTCTGCAATTGGTCACAACTAT...CTGTGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| 3UTR TCA 72 bp | GGCAAGGTAAGTAGTTGGATGAAATCACAGGAAGCATaGATAGTTGTGACCAATTGCAGAAGACTCAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: GKVSSWMKSQEA*IVVTNCRRLKL Trigger: CAGCTTGAGTCTTCTGCAATTGGTCACAACTATTCATGCTTCCTGTGATTTCATCCAACTACTTACCTTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| 3UTR-3UTR CAA 90 bp | ATTAGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGAATAGTTGTGACCAATaGCAGAAGACTCAAGCTGAT | + |
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Preference number: 3 (lower is better) Translates to: IRDKGDIVGKVSSWMKSQNSCDQ*QKTQAD Trigger: ATCAGCTTGAGTCTTCTGCAATTGGTCACAACTATT...CTGTGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| 3UTR-3UTR CAA 90 bp | CTGATTAGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCAAATAGTTGTGACCAATaGCAGAAGACTCAAGCTGAT | + |
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Preference number: 3 (lower is better) Translates to: LIRDKGDIVGKVSSWMKSNSCDQ*QKTQAD Trigger: ATCAGCTTGAGTCTTCTGCAATTGGTCACAACTATT...TGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCTAATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS-3UTR GCA 90 bp | ATCACAGGAAGCATGAATAGTTGTGACCAATTGCAGAAGACTCAAGCTGATTCCAGGAGCAGCAGTGGTTaGAGTGGTTGCAGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ITGSMNSCDQLQKTQADSRSSSG*SGCSSS Trigger: ACTGCTGCTGCAACCACTGCAACCACTGCTGCTCCT...GGAATCAGCTTGAGTCTTCTGCAATTGGTCACAACTATTCATGCTTCCTGTGAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS-3UTR CCA 90 bp | GATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGGAAGCAAGCAGGACCAGTAGCTaGATACGTGTCAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DKGDIVGKVSSWMKSQEASRTSS*IRVSWS Trigger: GCTCCAGCTGACACGTATCCAGCTACTGGTCCTGCT...TGCTTCCTGTGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS-3UTR CCA 90 bp | GATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGGAAGCATGGATACGTGTCAGCTaGAGCAGCTGTTGTCGGATT | + |
|
Preference number: 4 (lower is better) Translates to: DKGDIVGKVSSWMKSQEAWIRVS*SSCCRI Trigger: AATCCGACAACAGCTGCTCCAGCTGACACGTATCCA...TGCTTCCTGTGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS-3UTR CCA 90 bp | ATTAGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGAGCAGGACCAGTAGCTaGATACGTGTCAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IRDKGDIVGKVSSWMKSQSRTSS*IRVSWS Trigger: GCTCCAGCTGACACGTATCCAGCTACTGGTCCTGCT...CTGTGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS-3UTR TCA 90 bp | ATTAGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGTTCATGGTGGTGACCTaGAGATCAGGGAGCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IRDKGDIVGKVSSWMKSQFMVVT*RSGSTD Trigger: GTCTGTGCTCCCTGATCTTCAGGTCACCACCATGAA...CTGTGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308796.11 |
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| CDS-3UTR CCA 90 bp | AGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGGAAGCTGTTGTCGGATTCTaGGCAGAGACCAGAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RDKGDIVGKVSSWMKSQEAVVGF*AETRKM Trigger: CATCTTTCTGGTCTCTGCCCAGAATCCGACAACAGC...TTCCTGTGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308796.11 |
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| CDS-3UTR CCA 90 bp | AGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGGAATGGATACGTGTCAGCTaGAGCAGCTGTTGTCGGATT | + |
|
Preference number: 4 (lower is better) Translates to: RDKGDIVGKVSSWMKSQEWIRVS*SSCCRI Trigger: AATCCGACAACAGCTGCTCCAGCTGACACGTATCCA...TTCCTGTGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS-3UTR TCA 90 bp | CTGATTAGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCAAGAACTTCATGGTGGTaGCCTGAAGATCAGGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LIRDKGDIVGKVSSWMKSRTSWW*PEDQGA Trigger: TGCTCCCTGATCTTCAGGTCACCACCATGAAGTTCT...TGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCTAATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308796.11 |
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| CDS-3UTR GCA 90 bp | CTGATTAGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACTCTGCTTTAGTCACTaGCAGTTGATACCCATGGTC | + |
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Preference number: 4 (lower is better) Translates to: LIRDKGDIVGKVSSWMKSLCFSH*QLIPMV Trigger: GACCATGGGTATCAACTGGCAGTGACTAAAGCAGAG...TGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCTAATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546809.5 |
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| CDS-3UTR TCA 90 bp | GATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGGAAGCAAAATCACAGGAAGCATaGATAGTTGTGACCAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: DKGDIVGKVSSWMKSQEAKSQEA*IVVTNC Trigger: GCAATTGGTCACAACTATTCATGCTTCCTGTGATTT...TGCTTCCTGTGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS-3UTR CCA 90 bp | AGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGGAAGATCCCCAACCCATTTaGGTAAAACTGGAATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RDKGDIVGKVSSWMKSQEDPQPI*VKLECL Trigger: AAGACATTCCAGTTTTACCCAAATGGGTTGGGGATC...TTCCTGTGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS-3UTR TCA 90 bp | AGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGGAAAAATCACAGGAAGCATaGATAGTTGTGACCAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: RDKGDIVGKVSSWMKSQEKSQEA*IVVTNC Trigger: GCAATTGGTCACAACTATTCATGCTTCCTGTGATTT...TTCCTGTGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS-3UTR GCA 90 bp | ATCACAGGAAGCATGAATAGTTGTGACCAATTGCAGAAGACTCAAGCTGATTCCATAGTTGTGACCAATTaGAGAAGACTCAAGCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: ITGSMNSCDQLQKTQADSIVVTN*RRLKLI Trigger: AATCAGCTTGAGTCTTCTGCAATTGGTCACAACTAT...GGAATCAGCTTGAGTCTTCTGCAATTGGTCACAACTATTCATGCTTCCTGTGAT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS-3UTR GCA 90 bp | GATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGGAAGCAATAGTTGTGACCAATTaGAGAAGACTCAAGCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: DKGDIVGKVSSWMKSQEAIVVTN*RRLKLI Trigger: AATCAGCTTGAGTCTTCTGCAATTGGTCACAACTAT...TGCTTCCTGTGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS-3UTR CCA 90 bp | CTGATTAGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCAGATCCCCAACCCATTTaGGTAAAACTGGAATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LIRDKGDIVGKVSSWMKSDPQPI*VKLECL Trigger: AAGACATTCCAGTTTTACCCAAATGGGTTGGGGATC...TGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCTAATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS-3UTR CCA 90 bp | CTGATTAGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCAGGCAAGGTAAGTAGTTaGATGAAATCACAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIRDKGDIVGKVSSWMKSGKVSS*MKSQEA Trigger: TGCTTCCTGTGATTTCATCCAACTACTTACCTTGCC...TGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCTAATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS-3UTR CCA 90 bp | ATTAGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGGGCAAGGTAAGTAGTTaGATGAAATCACAGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: IRDKGDIVGKVSSWMKSQGKVSS*MKSQEA Trigger: TGCTTCCTGTGATTTCATCCAACTACTTACCTTGCC...CTGTGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS GCA 90 bp | CGTGTCAGCTGGAGCAGCTGTTGTCGGATTCTCTGCTTTAGTCACTaGCAGTTGATACCCATGGTCACCTCCCATACTGGCCAGAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: RVSWSSCCRILCFSH*QLIPMVTSHTGQKP Trigger: AGGCTTCTGGCCAGTATGGGAGGTGACCATGGGTATCAACTGGCAGTGACTAAAGCAGAGAATCCGACAACAGCTGCTCCAGCTGACACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546809.5 |
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| CDS TCA 90 bp | GCTGGAGCAGCTGTTGTCGGATTCTCTGCTTTAGTCACTGCCAGTTaGTACCCATGGTCACCTCCCATACTGGCCAGAAGCCTGAACTGT | + |
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Preference number: 5 (lower is better) Translates to: AGAAVVGFSALVTAS*YPWSPPILARSLNC Trigger: ACAGTTCAGGCTTCTGGCCAGTATGGGAGGTGACCATGGGTATCAACTGGCAGTGACTAAAGCAGAGAATCCGACAACAGCTGCTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546809.5 |
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| CDS GCA 90 bp | AAAATCTGGAATGTCTTTACGAGCAGTGGTAGAAGCAGCGGTGGTTaGAGTGGTAGGAGCAGCAGTGGTTGCAGTGGTTGCAGCAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: KIWNVFTSSGRSSGG*SGRSSSGCSGCSSS Trigger: ACTGCTGCTGCAACCACTGCAACCACTGCTGCTCCTACCACTGCAACCACCGCTGCTTCTACCACTGCTCGTAAAGACATTCCAGATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652289.1 |
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| CDS GCA 90 bp | AGTAGCTGGATACGTGTCAGCTGGAGCAGCTGTTGTCGGATTCTCTaGTTTAGTCACTGCCAGTTGATACCCATGGTCACCTCCCATACT | + |
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Preference number: 5 (lower is better) Translates to: SSWIRVSWSSCCRIL*FSHCQLIPMVTSHT Trigger: AGTATGGGAGGTGACCATGGGTATCAACTGGCAGTGACTAAAGCAGAGAATCCGACAACAGCTGCTCCAGCTGACACGTATCCAGCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546809.5 |
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| CDS CCA 90 bp | GAGATGACATTCAAGTGCAGACTCACTAGCTGGATACGTGTCAGCTaGAGCAGCTGTTGTCGGATTCTGGGCAGAGACCAGAAAGATGGA | + |
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Preference number: 5 (lower is better) Translates to: EMTFKCRLTSWIRVS*SSCCRILGRDQKDG Trigger: TCCATCTTTCTGGTCTCTGCCCAGAATCCGACAACAGCTGCTCCAGCTGACACGTATCCAGCTAGTGAGTCTGCACTTGAATGTCATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547958.1 |
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| CDS CCA 90 bp | GGTTATTGCTGGAAAGAGATGACATTCAAGTGCAGACTCACTAGCTaGATACGTGTCAGCTGGAGCAGCTGTTGTCGGATTCTGGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: GYCWKEMTFKCRLTS*IRVSWSSCCRILGR Trigger: TCTGCCCAGAATCCGACAACAGCTGCTCCAGCTGACACGTATCCAGCTAGTGAGTCTGCACTTGAATGTCATCTCTTTCCAGCAATAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547958.1 |
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| CDS-3UTR CAA 90 bp | GATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGGAAGCACAGCTGGAGCAGCTGTaGTCGGATTCTGGGCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: DKGDIVGKVSSWMKSQEAQLEQL*SDSGQR Trigger: TCTCTGCCCAGAATCCGACAACAGCTGCTCCAGCTG...TGCTTCCTGTGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308796.11 |
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| CDS TCA 90 bp | TGGAAACTCCCAAGAGTACCAGGACTGCTAAGAACTTCATGGTGGTaGCCTGAAGATCAGGGAGCACAGACAAAAATGCTTCAAAGCCTA | + |
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Preference number: 5 (lower is better) Translates to: WKLPRVPGLLRTSWW*PEDQGAQTKMLQSL Trigger: TAGGCTTTGAAGCATTTTTGTCTGTGCTCCCTGATCTTCAGGTCACCACCATGAAGTTCTTAGCAGTCCTGGTACTCTTGGGAGTTTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000547958.1 |
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| CDS GCA 90 bp | CTGGAAGTGAAAAATGGTTATTGCTGGAAAGAGATGACATTCAAGTaGAGACTCACTAGCTGGATACGTGTCAGCTGGAGCAGCTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: LEVKNGYCWKEMTFK*RLTSWIRVSWSSCC Trigger: ACAACAGCTGCTCCAGCTGACACGTATCCAGCTAGTGAGTCTGCACTTGAATGTCATCTCTTTCCAGCAATAACCATTTTTCACTTCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547958.1 |
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| CDS CCA 90 bp | AACTGGCTGTTTGACATGAGGCTGGAAGTGAAAAATGGTTATTGCTaGAAAGAGATGACATTCAAGTGCAGACTCACTAGCTGGATACGT | + |
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Preference number: 5 (lower is better) Translates to: NWLFDMRLEVKNGYC*KEMTFKCRLTSWIR Trigger: ACGTATCCAGCTAGTGAGTCTGCACTTGAATGTCATCTCTTTCCAGCAATAACCATTTTTCACTTCCAGCCTCATGTCAAACAGCCAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547958.1 |
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| CDS-3UTR CAA 90 bp | ATCACAGGAAGCATGAATAGTTGTGACCAATTGCAGAAGACTCAAGCTGATTCCAGATCCCCAACCCATTaGGGTAAAACTGGAATGTCT | + |
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Preference number: 5 (lower is better) Translates to: ITGSMNSCDQLQKTQADSRSPTH*GKTGMS Trigger: AGACATTCCAGTTTTACCCAAATGGGTTGGGGATCT...GGAATCAGCTTGAGTCTTCTGCAATTGGTCACAACTATTCATGCTTCCTGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS TCA 90 bp | CTAGGCTCATTAGGATCCCTTGGATATGTGAATTTGCCAGTTGGTTaGTCCATATTTAGATACCAGGCCCAGACAACCCAAAGTTATTCT | + |
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Preference number: 5 (lower is better) Translates to: LGSLGSLGYVNLPVG*SIFRYQAQTTQSYS Trigger: AGAATAACTTTGGGTTGTCTGGGCCTGGTATCTAAATATGGATCAACCAACTGGCAAATTCACATATCCAAGGGATCCTAATGAGCCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652289.1 |
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| CDS TCA 90 bp | GATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCACAGGAAGCATaGATAGTTGTGACCAATTGCAGAAGACTCAAGCTGATTCCATCT | + |
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Preference number: 5 (lower is better) Translates to: DIVGKVSSWMKSQEA*IVVTNCRRLKLIPS Trigger: AGATGGAATCAGCTTGAGTCTTCTGCAATTGGTCACAACTATTCATGCTTCCTGTGATTTCATCCAACTACTTACCTTGCCTACGATATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS-3UTR CAA 90 bp | CTGATTAGAGATAAAGGGGATATCGTAGGCAAGGTAAGTAGTTGGATGAAATCAAGATCCCCAACCCATTaGGGTAAAACTGGAATGTCT | + |
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Preference number: 5 (lower is better) Translates to: LIRDKGDIVGKVSSWMKSRSPTH*GKTGMS Trigger: AGACATTCCAGTTTTACCCAAATGGGTTGGGGATCT...TGATTTCATCCAACTACTTACCTTGCCTACGATATCCCCTTTATCTCTAATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000546809.5 |
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| CDS TCA 90 bp | TTTAGATACCAGGCCCAGACAACCCAAAGTTATTCTGGGGGCCTTTaGATGTTGTTCAGGAGAGAGAATAAATGGATAATCAATGAACTA | + |
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Preference number: 5 (lower is better) Translates to: FRYQAQTTQSYSGGL*MLFRRENKWIINEL Trigger: TAGTTCATTGATTATCCATTTATTCTCTCTCCTGAACAACATTCAAAGGCCCCCAGAATAACTTTGGGTTGTCTGGGCCTGGTATCTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652289.1 |
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| CDS CCA 90 bp | CTTTTGCTTAGGATTCCTTATAACAAAGACTATCCACATGGAAACTaGCTGTTTGACATGAGGCTGGAAGTGAAAAATGGTTATTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LLLRIPYNKDYPHGN*LFDMRLEVKNGYCW Trigger: CCAGCAATAACCATTTTTCACTTCCAGCCTCATGTCAAACAGCCAGTTTCCATGTGGATAGTCTTTGTTATAAGGAATCCTAAGCAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000547958.1 |
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| CDS TCA 90 bp | AAGACAAATGGTAAAGCCTATCCACATTTCCCTAATTATTTTCTGTaGGGGTGCAGAAGAAAGAACTCACTTATCTATTACAGCATACCA | + |
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Preference number: 5 (lower is better) Translates to: KTNGKAYPHFPNYFL*GCRRKNSLIYYSIP Trigger: TGGTATGCTGTAATAGATAAGTGAGTTCTTTCTTCTGCACCCTCACAGAAAATAATTAGGGAAATGTGGATAGGCTTTACCATTTGTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652289.1 |
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| CDS CCA 72 bp | ATCATCAGCAGGACCAGTAGCTGGATACGTGTCAGCTaGAGCAGCTGTTGTCGGATTCTGGGCAGAGACCAG | + |
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Preference number: 6 (lower is better) Translates to: IISRTSSWIRVS*SSCCRILGRDQ Trigger: CTGGTCTCTGCCCAGAATCCGACAACAGCTGCTCCAGCTGACACGTATCCAGCTACTGGTCCTGCTGATGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000619042.1 |
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| CDS CCA 72 bp | TTCAAGTGCAGACTCACTAGCTGGATACGTGTCAGCTaGAGCAGCTGTTGTCGGATTCTGGGCAGAGACCAG | + |
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Preference number: 6 (lower is better) Translates to: FKCRLTSWIRVS*SSCCRILGRDQ Trigger: CTGGTCTCTGCCCAGAATCCGACAACAGCTGCTCCAGCTGACACGTATCCAGCTAGTGAGTCTGCACTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547958.1 |
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| CDS CAA 90 bp | AGCTGGAGCAGCTGTTGTCGGATTCTCTGCTTTAGTCACTGCCAGTaGATACCCATGGTCACCTCCCATACTGGCCAGAAGCCTGAACTG | + |
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Preference number: 6 (lower is better) Translates to: SWSSCCRILCFSHCQ*IPMVTSHTGQKPEL Trigger: CAGTTCAGGCTTCTGGCCAGTATGGGAGGTGACCATGGGTATCAACTGGCAGTGACTAAAGCAGAGAATCCGACAACAGCTGCTCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546809.5 |
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| CDS TCA 72 bp | GCTGTTGTCGGATTCTCTGCTTTAGTCACTGCCAGTTaGTACCCATGGTCACCTCCCATACTGGCCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: AVVGFSALVTAS*YPWSPPILARS Trigger: GCTTCTGGCCAGTATGGGAGGTGACCATGGGTATCAACTGGCAGTGACTAAAGCAGAGAATCCGACAACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546809.5 |
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| CDS GCA 72 bp | TGGAGCAGCTGTTGTCGGATTCTCTGCTTTAGTCACTaGCAGTTGATACCCATGGTCACCTCCCATACTGGC | + |
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Preference number: 6 (lower is better) Translates to: WSSCCRILCFSH*QLIPMVTSHTG Trigger: GCCAGTATGGGAGGTGACCATGGGTATCAACTGGCAGTGACTAAAGCAGAGAATCCGACAACAGCTGCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546809.5 |
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| CDS GCA 72 bp | ATACGTGTCAGCTGGAGCAGCTGTTGTCGGATTCTCTaGTTTAGTCACTGCCAGTTGATACCCATGGTCACC | + |
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Preference number: 6 (lower is better) Translates to: IRVSWSSCCRIL*FSHCQLIPMVT Trigger: GGTGACCATGGGTATCAACTGGCAGTGACTAAAGCAGAGAATCCGACAACAGCTGCTCCAGCTGACACGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546809.5 |
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| CDS CCA 72 bp | ATCATCAGCAGGACCAGTAGCTGGATACGTGTCAGCTaGAGCAGCTGTTGTCGGATTCTCTGCTTTAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: IISRTSSWIRVS*SSCCRILCFSH Trigger: GTGACTAAAGCAGAGAATCCGACAACAGCTGCTCCAGCTGACACGTATCCAGCTACTGGTCCTGCTGATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546809.5 |
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| CDS CAA 72 bp | AGCTGTTGTCGGATTCTCTGCTTTAGTCACTGCCAGTaGATACCCATGGTCACCTCCCATACTGGCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SCCRILCFSHCQ*IPMVTSHTGQK Trigger: CTTCTGGCCAGTATGGGAGGTGACCATGGGTATCAACTGGCAGTGACTAAAGCAGAGAATCCGACAACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546809.5 |
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| CDS GCA 72 bp | TTTGCATTCCCACCAGCAATGAGTGAGTATTCCTGTTaGTCCACATCCTCACCAGCATTAGGTGCTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: FAFPPAMSEYSC*STSSPALGAVR Trigger: TCTGACAGCACCTAATGCTGGTGAGGATGTGGAGCAACAGGAATACTCACTCATTGCTGGTGGGAATGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652289.1 |
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| CDS TCA 72 bp | CCAAGAGTACCAGGACTGCTAAGAACTTCATGGTGGTaGCCTGAAGATCAGGGAGCACAGACAAAAATGCTT | + |
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Preference number: 6 (lower is better) Translates to: PRVPGLLRTSWW*PEDQGAQTKML Trigger: AAGCATTTTTGTCTGTGCTCCCTGATCTTCAGGTCACCACCATGAAGTTCTTAGCAGTCCTGGTACTCTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000308796.11 ENST00000547958.1 |
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| CDS GCA 72 bp | AGTGTGTGTAGGCATGTGTGTGTGTGTGTATGTGTGTaGATATACCCACATATTGGGGGTGGGGTATATTTG | + |
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Preference number: 6 (lower is better) Translates to: SVCRHVCVCVCV*IYPHIGGGVYL Trigger: CAAATATACCCCACCCCCAATATGTGGGTATATGCACACACATACACACACACACACATGCCTACACACACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652289.1 |
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| CDS TCA 72 bp | ATACGTGTCAGCTGGAGCAGCTGTTGTCGGATTCTCTaGGTGTACAAAACATCCAGTCTGTTTCCAAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: IRVSWSSCCRIL*VYKTSSLFPKF Trigger: AAACTTTGGAAACAGACTGGATGTTTTGTACACTCAGAGAATCCGACAACAGCTGCTCCAGCTGACACGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547990.1 ENST00000652289.1 |
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| CDS TCA 72 bp | CAGGCCCAGACAACCCAAAGTTATTCTGGGGGCCTTTaGATGTTGTTCAGGAGAGAGAATAAATGGATAATC | + |
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Preference number: 6 (lower is better) Translates to: QAQTTQSYSGGL*MLFRRENKWII Trigger: GATTATCCATTTATTCTCTCTCCTGAACAACATTCAAAGGCCCCCAGAATAACTTTGGGTTGTCTGGGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652289.1 |
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| CDS GCA 72 bp | AAAAATGGTTATTGCTGGAAAGAGATGACATTCAAGTaGAGACTCACTAGCTGGATACGTGTCAGCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: KNGYCWKEMTFK*RLTSWIRVSWS Trigger: GCTCCAGCTGACACGTATCCAGCTAGTGAGTCTGCACTTGAATGTCATCTCTTTCCAGCAATAACCATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547958.1 |
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| CDS TCA 72 bp | TTAGGATCCCTTGGATATGTGAATTTGCCAGTTGGTTaGTCCATATTTAGATACCAGGCCCAGACAACCCAA | + |
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Preference number: 6 (lower is better) Translates to: LGSLGYVNLPVG*SIFRYQAQTTQ Trigger: TTGGGTTGTCTGGGCCTGGTATCTAAATATGGATCAACCAACTGGCAAATTCACATATCCAAGGGATCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652289.1 |
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| CDS CCA 72 bp | TTTGACATGAGGCTGGAAGTGAAAAATGGTTATTGCTaGAAAGAGATGACATTCAAGTGCAGACTCACTAGC | + |
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Preference number: 6 (lower is better) Translates to: FDMRLEVKNGYC*KEMTFKCRLTS Trigger: GCTAGTGAGTCTGCACTTGAATGTCATCTCTTTCCAGCAATAACCATTTTTCACTTCCAGCCTCATGTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547958.1 |
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| CDS CCA 72 bp | AGGATTCCTTATAACAAAGACTATCCACATGGAAACTaGCTGTTTGACATGAGGCTGGAAGTGAAAAATGGT | + |
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Preference number: 6 (lower is better) Translates to: RIPYNKDYPHGN*LFDMRLEVKNG Trigger: ACCATTTTTCACTTCCAGCCTCATGTCAAACAGCCAGTTTCCATGTGGATAGTCTTTGTTATAAGGAATCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547958.1 |
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| CDS CAA 90 bp | TTAACATGCAGTTTAAAGAAGTTTGAACAGACTGTCACAACCCAATaGATCAACTTTTGTAATGTTTCCAAGAGTCTCAGGACAGAGATG | + |
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Preference number: 6 (lower is better) Translates to: LTCSLKKFEQTVTTQ*INFCNVSKSLRTEM Trigger: CATCTCTGTCCTGAGACTCTTGGAAACATTACAAAAGTTGATCAATTGGGTTGTGACAGTCTGTTCAAACTTCTTTAAACTGCATGTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652289.1 |
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| CDS CAA 72 bp | AGTTTAAAGAAGTTTGAACAGACTGTCACAACCCAATaGATCAACTTTTGTAATGTTTCCAAGAGTCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SLKKFEQTVTTQ*INFCNVSKSLR Trigger: CCTGAGACTCTTGGAAACATTACAAAAGTTGATCAATTGGGTTGTGACAGTCTGTTCAAACTTCTTTAAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652289.1 |
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| CDS TCA 72 bp | TTACAGCTGATGAACCTATATTGGTACATTATCACCTaGAGTCTTTATTTAGTTTATGTTCGGGTTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LQLMNLYWYIIT*SLYLVYVRVLS Trigger: AGAGAGAACCCGAACATAAACTAAATAAAGACTTCAGGTGATAATGTACCAATATAGGTTCATCAGCTGTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652289.1 |
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