Pregenerated sensors for MUC22 (Homo sapiens)
Ensembl gene IDs: ENSG00000261272Ensembl transcript IDs: ENST00000561890.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTaGCGTGGCCTCCTTGGTGGCTCCCTCTGTGATCCACTCCATGGT | + |
|
Preference number: 1 (lower is better) Translates to: IICFDTQSMATAILS*RGLLGGSLCDPLHG Trigger: ACCATGGAGTGGATCACAGAGGGAGCCACCAAGGAGGCCACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| 3UTR-3UTR CCA 90 bp | TGGGAGAGAAGATGTCCTGAGGGTGGTTGTCGTGACTCCCCACAACAGAGGCTGCCATGGATCACATCCTaGGAAGCTTCCTATGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: WERRCPEGGCRDSPQQRLPWITS*EASYAP Trigger: TGGAGCATAGGAAGCTTCCCAGGATGTGATCCATGG...CAGCCTCTGTTGTGGGGAGTCACGACAACCACCCTCAGGACATCTTCTCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| 3UTR CAA 90 bp | CCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTaGTCCTGCCGTGGCCTCCTTGGTGGCTCCCTCTGTGATCCACTC | + |
|
Preference number: 2 (lower is better) Translates to: PPIICFDTQSMATAI*SCRGLLGGSLCDPL Trigger: GAGTGGATCACAGAGGGAGCCACCAAGGAGGCCACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| 3UTR-3UTR TCA 90 bp | GGGATGAGAAACGTTGACCCTGATGTGGCGGGAAATGGGAGAGAAGATGTCCTGAACTCACAGAAGCTTTaGCTTGAAGTCCCCTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: GMRNVDPDVAGNGREDVLNSQKL*LEVPSK Trigger: CTTGGAGGGGACTTCAAGTCAAAGCTTCTGTGAGTT...CAGGACATCTTCTCTCCCATTTCCCGCCACATCAGGGTCAACGTTTCTCATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| 3UTR-3UTR TCA 90 bp | GGGATGAGAAACGTTGACCCTGATGTGGCGGGAAATGGGAGAGAAGATGTCCTGTGCTGGTTCTTTTCTTaGCCTAGTCCATGTCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: GMRNVDPDVAGNGREDVLCWFFS*PSPCPS Trigger: AGATGGACATGGACTAGGTCAAGAAAAGAACCAGCA...CAGGACATCTTCTCTCCCATTTCCCGCCACATCAGGGTCAACGTTTCTCATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| 3UTR-3UTR CAA 90 bp | GGGATGAGAAACGTTGACCCTGATGTGGCGGGAAATGGGAGAGAAGATGTCCTGCACAGAAGCTTTGACTaGAAGTCCCCTCCAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GMRNVDPDVAGNGREDVLHRSFD*KSPPSQ Trigger: CTGGCTTGGAGGGGACTTCAAGTCAAAGCTTCTGTG...CAGGACATCTTCTCTCCCATTTCCCGCCACATCAGGGTCAACGTTTCTCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| 3UTR TCA 72 bp | TTTCTTAGACATGTCTTGGTAATATTTATAGCACCATaGGGAAACACAGGGATGAGAAACGTTGACCCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: FLRHVLVIFIAP*GNTGMRNVDPD Trigger: ATCAGGGTCAACGTTTCTCATCCCTGTGTTTCCTCATGGTGCTATAAATATTACCAAGACATGTCTAAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR TCA 90 bp | TGGGAGAGAAGATGTCCTGAGGGTGGTTGTCGTGACTCCCCACAACAGAGGCTGGAGACTATGGTGGTCTaGGAGCCTGTGGGGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WERRCPEGGCRDSPQQRLETMVV*EPVGEG Trigger: CCCCTCCCCCACAGGCTCTCAGACCACCATAGTCTC...CAGCCTCTGTTGTGGGGAGTCACGACAACCACCCTCAGGACATCTTCTCTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR GCA 90 bp | TGGGAGAGAAGATGTCCTGAGGGTGGTTGTCGTGACTCCCCACAACAGAGGCTGAGAGCCCATGGTGGATaGCATGGTAGGCTCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WERRCPEGGCRDSPQQRLRAHGG*HGRLRA Trigger: GGCTCTGAGCCTACCATGGCATCCACCATGGGCTCT...CAGCCTCTGTTGTGGGGAGTCACGACAACCACCCTCAGGACATCTTCTCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CCA 90 bp | GGGATGAGAAACGTTGACCCTGATGTGGCGGGAAATGGGAGAGAAGATGTCCTGGGCAGATGGCATGGTTaGGGGGAGCCCCCAAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: GMRNVDPDVAGNGREDVLGRWHG*GEPPNC Trigger: GCAATTTGGGGGCTCCCCCCAACCATGCCATCTGCC...CAGGACATCTTCTCTCCCATTTCCCGCCACATCAGGGTCAACGTTTCTCATCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR GCA 90 bp | GGGATGAGAAACGTTGACCCTGATGTGGCGGGAAATGGGAGAGAAGATGTCCTGCCAAAGGCCAGCCAGTaGCAGGGTAAGCCTTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GMRNVDPDVAGNGREDVLPKASQ*QGKPCR Trigger: CCTACAAGGCTTACCCTGGCACTGGCTGGCCTTTGG...CAGGACATCTTCTCTCCCATTTCCCGCCACATCAGGGTCAACGTTTCTCATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CCA 90 bp | CATGACCCCCTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCCAGCGGGGGCCACAGTaGTCTCAGAGCTCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HDPLPPIICFDTQSMATAQRGPQ*SQSSCW Trigger: CCAGCATGAGCTCTGAGACCACTGTGGCCCCCGCTG...GGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAGGGGGTCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR GCA 90 bp | CATGACCCCCTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCACAGCCATCTTGTCCTaGCGTGGCCTCCTTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HDPLPPIICFDTQSMATATAILS*RGLLGG Trigger: GCCACCAAGGAGGCCACGGCAGGACAAGATGGCTGT...GGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAGGGGGTCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CCA 90 bp | TGGGAGAGAAGATGTCCTGAGGGTGGTTGTCGTGACTCCCCACAACAGAGGCTGTGGTGGAGGCCATGGTaGTCTCAGAAATTATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WERRCPEGGCRDSPQQRLWWRPW*SQKLWR Trigger: CCTCCATAATTTCTGAGACCACCATGGCCTCCACCA...CAGCCTCTGTTGTGGGGAGTCACGACAACCACCCTCAGGACATCTTCTCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR TCA 90 bp | TGGGAGAGAAGATGTCCTGAGGGTGGTTGTCGTGACTCCCCACAACAGAGGCTGAACTCACAGAAGCTTTaGCTTGAAGTCCCCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WERRCPEGGCRDSPQQRLNSQKL*LEVPSK Trigger: CTTGGAGGGGACTTCAAGTCAAAGCTTCTGTGAGTT...CAGCCTCTGTTGTGGGGAGTCACGACAACCACCCTCAGGACATCTTCTCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR GCA 90 bp | TGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTGGCCTCCTTGCCTGTGGTGAAGGCTaGAGTAGAAGCCATGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CFDTQSMATAILSCRGLLACGEG*SRSHGG Trigger: TCCACCATGGCTTCTACTGCAGCCTTCACCACAGGC...AAGGAGGCCACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR GCA 90 bp | CCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTGGTGGTGTTAGAGCCTaGAGCGGGGGCCACAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PIICFDTQSMATAILSCRGGVRA*SGGHSG Trigger: ACCACTGTGGCCCCCGCTGCAGGCTCTAACACCACC...ACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTGGTGGCTCCCTCTGTaGTCCACTCCATGGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPPIICFDTQSMATAILWWLPL*STPWCP Trigger: AGGACACCATGGAGTGGATCACAGAGGGAGCCACCA...CAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR GCA 90 bp | CCCCTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGGCCCATGGTGGAGGCTaGAGTCGTCTCAGAATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLPPIICFDTQSMATAILAHGGG*SRLRMC Trigger: GCACATTCTGAGACGACTGCAGCCTCCACCATGGGC...CAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CCA 90 bp | CTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCCATCTTGTCCTGCCGTaGCCTCCTTGGTGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPPIICFDTQSMATAILSHLVLP*PPWWLP Trigger: AGGGAGCCACCAAGGAGGCCACGGCAGGACAAGATG...GGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGCTTGGAGTCTGCAGTTaGGGTTGTGGTGGCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLPPIICFDTQSMATAILLGVCS*GCGGLR Trigger: TCTGAGGCCACCACAACCTCAACTGCAGACTCCAAG...CAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGCGTCAGTGGCCTTGGTaGGTACAAACGTGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLPPIICFDTQSMATAILRQWPW*VQTWWK Trigger: CTTCCACCACGTTTGTACTCACCAAGGCCACTGACG...CAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR TCA 90 bp | TGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTGGCCTCCTTAGTGGTTCTGGTGCCTaGCATAGGTGTGTTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CFDTQSMATAILSCRGLLSGSGA*HRCVGD Trigger: ATCACCAACACACCTATGTCAGGCACCAGAACCACT...AAGGAGGCCACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR TCA 90 bp | TGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTGGCCTCCTTGCCAGTCAAAGTCTCTaGGGTCCTTTTGCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFDTQSMATAILSCRGLLASQSL*GPFAGS Trigger: AGAACCAGCAAAAGGACCTCAGAGACTTTGACTGGC...AAGGAGGCCACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR GCA 90 bp | CTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCGCCTGTGAGGGAAGTTaGAGTGGGCTCCAAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPPIICFDTQSMATAILSACEGS*SGLQAC Trigger: GCAAGCTTGGAGCCCACTGCAACTTCCCTCACAGGC...GGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CCA 90 bp | TGGGAGAGAAGATGTCCTGAGGGTGGTTGTCGTGACTCCCCACAACAGAGGCTGTGGTCTCAGAAATTATaGAGGAGGCCATCGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WERRCPEGGCRDSPQQRLWSQKL*RRPSFS Trigger: AGAAAACGATGGCCTCCTCCATAATTTCTGAGACCA...CAGCCTCTGTTGTGGGGAGTCACGACAACCACCCTCAGGACATCTTCTCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CCA 90 bp | CCCCTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGCTGTGTTTGTGCCCATaGACACCGGGCCTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPPIICFDTQSMATAILLCLCP*TPGLFP Trigger: AGGAAACAGGCCCGGTGTCCATGGGCACAAACACAG...CAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CCA 90 bp | CCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTCTGAGGTGGAGACTGTaGTGGTCTCCAAATCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PIICFDTQSMATAILSCRLRWRL*WSPNLR Trigger: CCGCAGATTTGGAGACCACCACAGTCTCCACCTCAG...ACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CCA 90 bp | CCCCTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGGTGTTGGTGATGGGCTaGATAGAAACGTCAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLPPIICFDTQSMATAILVLVMG*IETSVA Trigger: GGCCACTGACGTTTCTATCCAGCCCATCACCAACAC...CAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR GCA 90 bp | CCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTGGGGAGCCCCCAAATTaGTCCACAGTTTGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PIICFDTQSMATAILSCRGEPPN*STVWLL Trigger: AAGAAGCCAAACTGTGGAGCAATTTGGGGGCTCCCC...ACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CCA 90 bp | CATGACCCCCTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCTGGTATTCTCAGAGCTaGGTCCCAGAAGTCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HDPLPPIICFDTQSMATAWYSQS*VPEVQR Trigger: TCTTTGGACTTCTGGGACCCAGCTCTGAGAATACCA...GGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAGGGGGTCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CCA 90 bp | CTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCCTGCAGCAAAGACTGTaGTCACCTCAGAGCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPPIICFDTQSMATAILSLQQRL*SPQSLQ Trigger: CTGCAAGCTCTGAGGTGACCACAGTCTTTGCTGCAG...GGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CCA 90 bp | CCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTACGTTGACCCTGATGTaGCGGGAAATGGGAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PIICFDTQSMATAILSCRTLTLM*REMGEK Trigger: CTTCTCTCCCATTTCCCGCCACATCAGGGTCAACGT...ACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR TCA 90 bp | CCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTACAGAAGCTTTGACTTaGAGTCCCCTCCAAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PIICFDTQSMATAILSCRTEALT*SPLQAS Trigger: ACTGGCTTGGAGGGGACTTCAAGTCAAAGCTTCTGT...ACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CCA 90 bp | CTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCCCATGGATCACATCCTaGGAAGCTTCCTATGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPPIICFDTQSMATAILSPWITS*EASYAP Trigger: TGGAGCATAGGAAGCTTCCCAGGATGTGATCCATGG...GGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR GCA 90 bp | CCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTAGTCGTCTCAGAATGTaGAGTAGAGGCTGTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PIICFDTQSMATAILSCRSRLRM*SRGCCG Trigger: ACCACAACAGCCTCTACTGCACATTCTGAGACGACT...ACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGAATATCCACTTGGTTTaGTCACGTTTGTGGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLPPIICFDTQSMATAILNIHLV*SRLWVC Trigger: ACACACCCACAAACGTGATCAAACCAAGTGGATATT...CAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR TCA 90 bp | CATGACCCCCTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCACCCATAATATGTTTTaGTACCCAATCTATGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HDPLPPIICFDTQSMATATHNMF*YPIYGH Trigger: GTGGCCATAGATTGGGTATCAAAACATATTATGGGT...GGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAGGGGGTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR TCA 90 bp | CTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCTGGTTCTTTTCTTaGCCTAGTCCATGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPPIICFDTQSMATAILSCWFFS*PSPCPS Trigger: AGATGGACATGGACTAGGTCAAGAAAAGAACCAGCA...GGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR TCA 90 bp | CATGACCCCCTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATATTTATAGCACCATaGGGAAACACAGGGATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HDPLPPIICFDTQSMATAIFIAP*GNTGMR Trigger: TCTCATCCCTGTGTTTCCTCATGGTGCTATAAATAT...GGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAGGGGGTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CCA 90 bp | CCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTACGTTTGTGGGTGTGTaGCTCATGCTAACTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PIICFDTQSMATAILSCRTFVGV*LMLTVF Trigger: AAACACAGTTAGCATGAGCCACACACCCACAAACGT...ACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR GCA 90 bp | CCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTAAGTTGTCATTTAGATaGCTGGGTTCCAAAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PIICFDTQSMATAILSCRKLSFR*LGSKGR Trigger: CCTTCCTTTGGAACCCAGGCATCTAAATGACAACTT...ACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR GCA 90 bp | CCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTCTGGGAAGCTTCCTATaGTCCATTTTAATTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PIICFDTQSMATAILSCRLGSFL*SILIIS Trigger: TGAAATAATTAAAATGGAGCATAGGAAGCTTCCCAG...ACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CAA 90 bp | TGGGAGAGAAGATGTCCTGAGGGTGGTTGTCGTGACTCCCCACAACAGAGGCTGCACAGAAGCTTTGACTaGAAGTCCCCTCCAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WERRCPEGGCRDSPQQRLHRSFD*KSPPSQ Trigger: CTGGCTTGGAGGGGACTTCAAGTCAAAGCTTCTGTG...CAGCCTCTGTTGTGGGGAGTCACGACAACCACCCTCAGGACATCTTCTCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS CCA 90 bp | AGGCCAGCCAGTGCCAGGGTAAGCCTTGTAGGCAGATGGCATGGTTaGGGGGAGCCCCCAAATTGCTCCACAGTTTGGCTTCTTATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RPASARVSLVGRWHG*GEPPNCSTVWLLIF Trigger: AAAAATAAGAAGCCAAACTGTGGAGCAATTTGGGGGCTCCCCCCAACCATGCCATCTGCCTACAAGGCTTACCCTGGCACTGGCTGGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS CCA 90 bp | GTTCCAGTGGTTCTGGTGCCTGACATAGGTGTGTTGGTGATGGGCTaGATAGAAACGTCAGTGGCCTTGGTGAGTACAAACGTGGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VPVVLVPDIGVLVMG*IETSVALVSTNVVE Trigger: TTCCACCACGTTTGTACTCACCAAGGCCACTGACGTTTCTATCCAGCCCATCACCAACACACCTATGTCAGGCACCAGAACCACTGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CAA 90 bp | TGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTGGCCTCCTTGAAACGTCAGTGGCCTaGGTGAGTACAAACGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CFDTQSMATAILSCRGLLETSVA*VSTNVV Trigger: CACCACGTTTGTACTCACCAAGGCCACTGACGTTTC...AAGGAGGCCACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CAA 90 bp | CCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTGGGGGAGCCCCCAAATaGCTCCACAGTTTGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PIICFDTQSMATAILSCRGGAPK*LHSLAS Trigger: AGAAGCCAAACTGTGGAGCAATTTGGGGGCTCCCCC...ACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CAA 90 bp | TGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTGGCCTCCTTCCTGACATAGGTGTGTaGGTGATGGGCTGGATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CFDTQSMATAILSCRGLLPDIGV*VMGWIE Trigger: TTCTATCCAGCCCATCACCAACACACCTATGTCAGG...AAGGAGGCCACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CAA 90 bp | TGTTTTGATACCCAATCTATGGCCACAGCCATCTTGTCCTGCCGTGGCCTCCTTCAAACCCCCTGGGCCTaGATAGAAAATAAAGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CFDTQSMATAILSCRGLLQTPWA*IENKVA Trigger: TGCAACTTTATTTTCTATCAAGGCCCAGGGGGTTTG...AAGGAGGCCACGGCAGGACAAGATGGCTGTGGCCATAGATTGGGTATCAAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS-3UTR CAA 90 bp | CATGACCCCCTCCCACCCATAATATGTTTTGATACCCAATCTATGGCCACAGCCAAATATCCACTTGGTTaGATCACGTTTGTGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HDPLPPIICFDTQSMATAKYPLG*ITFVGV Trigger: CACACCCACAAACGTGATCAAACCAAGTGGATATTT...GGCTGTGGCCATAGATTGGGTATCAAAACATATTATGGGTGGGAGGGGGTCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS CCA 72 bp | AGTGCCAGGGTAAGCCTTGTAGGCAGATGGCATGGTTaGGGGGAGCCCCCAAATTGCTCCACAGTTTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SARVSLVGRWHG*GEPPNCSTVWL Trigger: AAGCCAAACTGTGGAGCAATTTGGGGGCTCCCCCCAACCATGCCATCTGCCTACAAGGCTTACCCTGGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS CAA 72 bp | CTGGTTCCAGTGGTTCTGGTGCCTGACATAGGTGTGTaGGTGATGGGCTGGATAGAAACGTCAGTGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LVPVVLVPDIGV*VMGWIETSVAL Trigger: CAAGGCCACTGACGTTTCTATCCAGCCCATCACCAACACACCTATGTCAGGCACCAGAACCACTGGAACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS CCA 72 bp | GTTCTGGTGCCTGACATAGGTGTGTTGGTGATGGGCTaGATAGAAACGTCAGTGGCCTTGGTGAGTACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: VLVPDIGVLVMG*IETSVALVSTN Trigger: GTTTGTACTCACCAAGGCCACTGACGTTTCTATCCAGCCCATCACCAACACACCTATGTCAGGCACCAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||
| CDS GCA 72 bp | AATAAAGTTGCACAAAAAGACCCAAAGGCCAGCCAGTaGCAGGGTAAGCCTTGTAGGCAGATGGCATGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: NKVAQKDPKASQ*QGKPCRQMAWL Trigger: CAACCATGCCATCTGCCTACAAGGCTTACCCTGGCACTGGCTGGCCTTTGGGTCTTTTTGTGCAACTTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561890.1 |
||