RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MUC12 (Homo sapiens)

Ensembl gene IDs: ENSG00000205277

Ensembl transcript IDs: ENST00000305119.3, ENST00000379442.7, ENST00000467414.1, ENST00000473098.5, ENST00000474482.1, ENST00000536621.5, ENST00000536621.6

Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACTGGCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTaGCTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGC +
Preference number: 1 (lower is better)
Translates to: DWPSLSAQSRTGFRA*LRSPLDPPRRLVVG
Trigger: GCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGCCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.5
3UTR TCA 90 bp AGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTaGCCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCT +
Preference number: 1 (lower is better)
Translates to: SSEQDRLQGLTSVSS*PAPEACGGLCVCSS
Trigger: AGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.5
3UTR GCA 90 bp GTAGGGAAATTCCAGAGTGGGGAGCCACCCAGGAGGAGACAGGGGTaGCGAGGCTTCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTT +
Preference number: 1 (lower is better)
Translates to: VGKFQSGEPPRRRQG*RGFWESGSSRMERL
Trigger: AAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGAAGCCTCGGCACCCCTGTCTCCTCCTGGGTGGCTCCCCACTCTGGAATTTCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.5
3UTR CAA 90 bp CAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTaGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: QLRAGPASGPDFGLL*TRPGGLWWALCLQL
Trigger: GAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.5
3UTR-3UTR CCA 90 bp GGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGACCATCTCCGGCCTCTaGATGTGGAGCTCTGTGCCA +
Preference number: 2 (lower is better)
Translates to: GPASGPDFGLLLTRPGGLTISGL*MWSSVP
Trigger: TGGCACAGAGCTCCACATCCAGAGGCCGGAGATGGT...CAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305119.3
3UTR-3UTR CCA 90 bp CAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCTCCGGCCTCTGGATGTaGAGCTCTGTGCCAGAGTCA +
Preference number: 2 (lower is better)
Translates to: QLRAGPASGPDFGLLLTRSGLWM*SSVPES
Trigger: TGACTCTGGCACAGAGCTCCACATCCAGAGGCCGGA...GCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305119.3
3UTR-3UTR CCA 90 bp CCCGTTGGCTCACACAGTGGATGCTACCATCTCCGGCCTCTGGATGTGGAGCTCCAACAGTCTCCAGGGTaGGCCGGAAGTTGTTGTAGG +
Preference number: 2 (lower is better)
Translates to: PVGSHSGCYHLRPLDVELQQSPG*AGSCCR
Trigger: CCTACAACAACTTCCGGCCCACCCTGGAGACTGTTG...GAGCTCCACATCCAGAGGCCGGAGATGGTAGCATCCACTGTGTGAGCCAACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305119.3
3UTR-3UTR CCA 90 bp CCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCTGAACAGAGCTAGACGTTGGCTCACACAGTaGATGCTACCATCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: PRRLVVGSVFAALLNRARRWLTQ*MLPSPA
Trigger: GGCCGGAGATGGTAGCATCCACTGTGTGAGCCAACG...TCTAGCTCTGTTCAGGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305119.3
3UTR-3UTR GCA 90 bp CCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCTGAACAGAGCTAGAGGATGTGGAGCTCTGTaGCAGAGTCAACAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: PRRLVVGSVFAALLNRARGCGAL*QSQQSP
Trigger: TGGAGACTGTTGACTCTGGCACAGAGCTCCACATCC...TCTAGCTCTGTTCAGGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305119.3
3UTR-3UTR TCA 90 bp GCTTTCAGATTTGCTTTTATTGGTAGGGAAATTCCAGAGTGGGGAGCCACCCAGACTTCGGTCTCCTCTTaGCCCGCCCCGGAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: AFRFAFIGREIPEWGATQTSVSS*PAPEAC
Trigger: ACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGT...CTGGGTGGCTCCCCACTCTGGAATTTCCCTACCAATAAAAGCAAATCTGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.5
3UTR-3UTR CCA 90 bp GCTTTCAGATTTGCTTTTATTGGTAGGGAAATTCCAGAGTGGGGAGCCACCCAGCCCGGAGGCTTGTGGTaGGCTCTGTGTTTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: AFRFAFIGREIPEWGATQPGGLW*ALCLQL
Trigger: GAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGG...CTGGGTGGCTCCCCACTCTGGAATTTCCCTACCAATAAAAGCAAATCTGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.5
3UTR TCA 72 bp CAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTaGCCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTT +
Preference number: 3 (lower is better)
Translates to: QDRLQGLTSVSS*PAPEACGGLCV
Trigger: AACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.5
3UTR CCA 72 bp CAGGAGGAGACAGGGGTGCCGAGGCTTCTGGGAGTCTaGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAG +
Preference number: 3 (lower is better)
Translates to: QEETGVPRLLGV*KLPDGEAYSPQ
Trigger: CTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGAAGCCTCGGCACCCCTGTCTCCTCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.5
3UTR TCA 72 bp AGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTaGCTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTT +
Preference number: 3 (lower is better)
Translates to: SLSAQSRTGFRA*LRSPLDPPRRL
Trigger: AAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.5
3UTR-3UTR CAA 90 bp ACTGGCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTACCCGCCCCGGAGGCTaGTGGTGGGCTCTGTGTTTG +
Preference number: 3 (lower is better)
Translates to: TGQVCQLRAGPASGPDFGTRPGG*WWALCL
Trigger: CAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGT...ACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.5
3UTR CCA 72 bp TTCAGATTTGCTTTTATTGGTAGGGAAATTCCAGAGTaGGGAGCCACCCAGGAGGAGACAGGGGTGCCGAGG +
Preference number: 3 (lower is better)
Translates to: FRFAFIGREIPE*GATQEETGVPR
Trigger: CCTCGGCACCCCTGTCTCCTCCTGGGTGGCTCCCCACTCTGGAATTTCCCTACCAATAAAAGCAAATCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.5
3UTR CAA 72 bp GCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTaGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: AGPASGPDFGLL*TRPGGLWWALC
Trigger: ACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.5
CDS-3UTR TCA 90 bp AGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAACTTCGGTCTCCTCTTaGCCCGCCCCGGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: RAGPASGPDFGLLLTRPGTSVSS*PAPEAC
Trigger: ACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGT...TCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR GCA 90 bp GAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGGGCAGCGGGGGCCACTaGGTTGCAGCTGACATGTGC +
Preference number: 4 (lower is better)
Translates to: ESGSSRMERLTAPSLPQQGSGGH*VAADMC
Trigger: GCACATGTCAGCTGCAACGCAGTGGCCCCCGCTGCC...CTGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp GGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGGGCTCCTGCAGCCCTTaGCTGCTCACTAAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GPDFGLLLTRPGGLWWALGSCSP*LLTKWE
Trigger: CTCCCACTTAGTGAGCAGGCAAGGGCTGCAGGAGCC...CAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp CCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGCCCGGAGGCTTGTGGTaGGCTCTGTGTTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PASGPDFGLLLTRPGGLWPGGLW*ALCLQL
Trigger: GAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGG...CCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp AGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGGGGGTGCCGAGGCTTCTaGGAGTCTGGAAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SLEAPGWRGLQPPAFPSRGCRGF*ESGSSR
Trigger: CCGGGAGCTTCCAGACTCCCAGAAGCCTCGGCACCC...CCTGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp GGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGCCACTGCGTTGCAGCTaGCATGTGCCCAGGTTACAG +
Preference number: 4 (lower is better)
Translates to: GPASGPDFGLLLTRPGGLPLRCS*HVPRLQ
Trigger: CTGTAACCTGGGCACATGTCAGCTGCAACGCAGTGG...CAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp CCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGACCATCTCCGGCCTCTaGATGTGGAGCTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: PASGPDFGLLLTRPGGLWTISGL*MWSSVP
Trigger: TGGCACAGAGCTCCACATCCAGAGGCCGGAGATGGT...CCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp CTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGTGGGAGGCCCCCGTTaGCTCACACAGTGGATGCTA +
Preference number: 4 (lower is better)
Translates to: LRAGPASGPDFGLLLTRPVGGPR*LTQWML
Trigger: TAGCATCCACTGTGTGAGCCAACGGGGGCCTCCCAC...GGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp GGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGCCTTCGGCAGCCTTCTaGGTGCATTGCTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GPASGPDFGLLLTRPGGLPSAAF*VHCSWK
Trigger: CTTCCAGGAGCAATGCACCCAGAAGGCTGCCGAAGG...CAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp GAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGACCGGCTTCAGGGCCTaGCTTCGGTCTCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: ESGSSRMERLTAPSLPQQTGFRA*LRSPLD
Trigger: GTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGT...CTGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp CCCGTTGGCTCACACAGTGGATGCTACCATCTCCGGCCTCTGGATGTGGAGCTCGGCAGCGGGGGCCACTaGGTTGCAGCTGACATGTGC +
Preference number: 4 (lower is better)
Translates to: PVGSHSGCYHLRPLDVELGSGGH*VAADMC
Trigger: GCACATGTCAGCTGCAACGCAGTGGCCCCCGCTGCC...GAGCTCCACATCCAGAGGCCGGAGATGGTAGCATCCACTGTGTGAGCCAACGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305119.3
CDS-3UTR GCA 90 bp CCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCTGAACAGAGCTCCTGCAGCCCTTGCCTaGTCACTAAGTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PPRRLVVGSVFAALLNRAPAALA*SLSGSP
Trigger: GGGGCTCCCACTTAGTGAGCAGGCAAGGGCTGCAGG...AGCTCTGTTCAGGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp CCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGCGGCAGCCTTCTGGGTaGATTGCTCCTGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: PASGPDFGLLLTRPGGLWRQPSG*IAPGSQ
Trigger: TTGACTTCCAGGAGCAATGCACCCAGAAGGCTGCCG...CCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp CTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCGTGTGTGTTCGTATTTaGGCACAGGCAGCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLTRPGGLWWALCLQLSVCVRI*AQAAGA
Trigger: GGCCCCCGCTGCCTGTGCCCAAATACGAACACACAC...GGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp CCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGCAACAGTCTCCAGGGTaGGCCGGAAGTTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: PASGPDFGLLLTRPGGLWQQSPG*AGSCCR
Trigger: CCTACAACAACTTCCGGCCCACCCTGGAGACTGTTG...CCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp CTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCTGAACCGCCCCGGAGGCTTGTaGTGGGCTCTGTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LDPPRRLVVGSVFAALLNRPGGL*WALCLQ
Trigger: CTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCG...GTTCAGGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp CCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTGCACAGGCAGGGGACTaGCCAAGTCTGTCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PDFGLLLTRPGGLWWALCAQAGD*PSLSAQ
Trigger: CTGAGCTGACAGACTTGGCCAGTCCCCTGCCTGTGC...ACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR TCA 90 bp GAGGCCCCCGTTGGCTCACACAGTGGATGCTACCATCTCCGGCCTCTGGATGTGACCGGCTTCAGGGCCTaGCTTCGGTCTCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: EAPVGSHSGCYHLRPLDVTGFRA*LRSPLD
Trigger: GTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGT...CACATCCAGAGGCCGGAGATGGTAGCATCCACTGTGTGAGCCAACGGGGGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305119.3
CDS-3UTR TCA 90 bp TGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGGAGCAGCCCGGAGTCACCGATaGATCCACGAAAGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: WKLPDGEAYSPQPSPAGAARSHR*IHESVL
Trigger: GAGGACACTTTCGTGGATTCATCGGTGACTCCGGGC...TGCTCCTGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp CTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCGGCTCACACAGTGGATaGTACCATCTCCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LLLTRPGGLWWALCLQLSGSHSG*YHLRPL
Trigger: CAGAGGCCGGAGATGGTAGCATCCACTGTGTGAGCC...GGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR GCA 90 bp CTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCCTTTCAGGGCATTCCTaGACCGTAGCTCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLLTRPGGLWWALCLQLSLSGHS*TVAPLQ
Trigger: CTGCAGGGGAGCTACGGTGCAGGAATGCCCTGAAAG...GGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp CCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCTGAACAGAGCTGTGTGTGTTCGTATTTaGGCACAGGCAGCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PPRRLVVGSVFAALLNRAVCVRI*AQAAGA
Trigger: GGCCCCCGCTGCCTGTGCCCAAATACGAACACACAC...AGCTCTGTTCAGGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp CTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCTCCGGCCTCTGGATGTaGAGCTCTGTGCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LLLTRPGGLWWALCLQLSSGLWM*SSVPES
Trigger: TGACTCTGGCACAGAGCTCCACATCCAGAGGCCGGA...GGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp GGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCACCATCTCCGGCCTCTaGATGTGGAGCTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GLLLTRPGGLWWALCLQLTISGL*MWSSVP
Trigger: TGGCACAGAGCTCCACATCCAGAGGCCGGAGATGGT...GAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp CTGGCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCGTGGGAGGCCCCCGTTaGCTCACACAGTGGATGCTA +
Preference number: 4 (lower is better)
Translates to: LAKSVSSEQDRLQGLTSVVGGPR*LTQWML
Trigger: TAGCATCCACTGTGTGAGCCAACGGGGGCCTCCCAC...GACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp GACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCCCGGAGGCTTGTGGTaGGCTCTGTGTTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: DFGLLLTRPGGLWWALCLPGGLW*ALCLQL
Trigger: GAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGG...CAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp ACTGGCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCGCCCCGGAGGCTTGTaGTGGGCTCTGTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: TGQVCQLRAGPASGPDFGRPGGL*WALCLQ
Trigger: CTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCG...ACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp CCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCTGAACAGAGCTGCACAGGCAGGGGACTaGCCAAGTCTGTCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PPRRLVVGSVFAALLNRAAQAGD*PSLSAQ
Trigger: CTGAGCTGACAGACTTGGCCAGTCCCCTGCCTGTGC...AGCTCTGTTCAGGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp GGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAATCCCCGTCGTCCCCTaGGCTAGCAAACTCCACCAA +
Preference number: 4 (lower is better)
Translates to: GVWKLPDGEAYSPQPSPAIPVVP*ASKLHQ
Trigger: TTGGTGGAGTTTGCTAGCCCAGGGGACGACGGGGAT...TGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp CAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCTGCCTGCTCACTAAGTaGGAGCCCCAGGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: QLRAGPASGPDFGLLLTRCLLTK*EPQAKA
Trigger: GGCTTTAGCCTGGGGCTCCCACTTAGTGAGCAGGCA...GCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp CTGGCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCCTGGAAGCTCCCGGATaGAGAGGCTTACAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LAKSVSSEQDRLQGLTSVLEAPG*RGLQPP
Trigger: TGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAG...GACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp CTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCAGGCTTCTGGGAGTCTaGAAGCTCCCGGATGGAGAG +
Preference number: 4 (lower is better)
Translates to: LLLTRPGGLWWALCLQLSRLLGV*KLPDGE
Trigger: CTCTCCATCCGGGAGCTTCCAGACTCCCAGAAGCCT...GGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp CCGAGGCTTCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGAGGGAAATTCCAGAGTaGGGAGCCACCCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PRLLGVWKLPDGEAYSPQREIPE*GATQEE
Trigger: CTCCTCCTGGGTGGCTCCCCACTCTGGAATTTCCCT...CTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGAAGCCTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp CTGGCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCCCACTGCGTTGCAGCTaGCATGTGCCCAGGTTACAG +
Preference number: 4 (lower is better)
Translates to: LAKSVSSEQDRLQGLTSVPLRCS*HVPRLQ
Trigger: CTGTAACCTGGGCACATGTCAGCTGCAACGCAGTGG...GACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR TCA 90 bp GGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGCAGTGTTGTCTCAGTTaGGCCTGGCTTACTGTGGAA +
Preference number: 4 (lower is better)
Translates to: GPDFGLLLTRPGGLWWALQCCLS*AWLTVE
Trigger: TTCCACAGTAAGCCAGGCTCAACTGAGACAACACTG...CAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp AGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGATGTGGAGCTCTGTaGCAGAGTCAACAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RAGPASGPDFGLLLTRPGGCGAL*QSQQSP
Trigger: TGGAGACTGTTGACTCTGGCACAGAGCTCCACATCC...TCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR GCA 90 bp GCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGACTGTTGTTGCCATTaGATCTGGGCTGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: ASGPDFGLLLTRPGGLWWDCCCH*IWAAVG
Trigger: TCCCACAGCAGCCCAGATGCAATGGCAACAACAGTC...CCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp GGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGCTCTCCCTCAGATTCTaGTCTGTGCCGTTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GPASGPDFGLLLTRPGGLLSLRF*SVPFSL
Trigger: CAGAGAAAACGGCACAGACCAGAATCTGAGGGAGAG...CAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305119.3
CDS-3UTR CCA 90 bp GACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCGTTGGCTCACACAGTaGATGCTACCATCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: DFGLLLTRPGGLWWALCLRWLTQ*MLPSPA
Trigger: GGCCGGAGATGGTAGCATCCACTGTGTGAGCCAACG...CAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp AGGCTTCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTCGTTGGCTCACACAGTaGATGCTACCATCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: RLLGVWKLPDGEAYSPQPRWLTQ*MLPSPA
Trigger: GGCCGGAGATGGTAGCATCCACTGTGTGAGCCAACG...AGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp GAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGTTTTGCACTGAGGCCTaGTGTTGTGGCAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ESGSSRMERLTAPSLPQQFCTEA*CCGSAG
Trigger: GCCAGCACTGCCACAACACCAGGCCTCAGTGCAAAA...CTGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp GCTTCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCAGATGGCCGTCTTCTaGAAGATGCCAGGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ASGSLEAPGWRGLQPPAFQMAVF*KMPGVP
Trigger: AGGCACCCCTGGCATCTTCCAGAAGACGGCCATCTG...GAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp CCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCTGAACAGAGCTGGCTCTTGGCGATGTTaGATTCACAGGTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PPRRLVVGSVFAALLNRAGSWRC*IHRSLP
Trigger: GGGGAGAGACCTGTGAATTCAACATCGCCAAGAGCC...AGCTCTGTTCAGGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR TCA 90 bp CTGGCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCGGCTCTTGGCGATGTTaGATTCACAGGTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LAKSVSSEQDRLQGLTSVGSWRC*IHRSLP
Trigger: GGGGAGAGACCTGTGAATTCAACATCGCCAAGAGCC...GACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR TCA 90 bp GACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGTGGTGGGTTCTCCACTaGTGCTGGAGCTTGTCATGC +
Preference number: 4 (lower is better)
Translates to: DFGLLLTRPGGLWWALCLWWVLH*CWSLSC
Trigger: GCATGACAAGCTCCAGCATCAGTGGAGAACCCACCA...CAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp TGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCTTCCTCAGTGAGGCCTaGTGTGCTGGAACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: CQLRAGPASGPDFGLLLTFLSEA*CAGTRR
Trigger: CCTGCGAGTTCCAGCACATCAGGCCTCACTGAGGAA...GGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp TGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGGAGCACCTGTCATCCACAAATaGACCAGCACCACCACACTC +
Preference number: 4 (lower is better)
Translates to: WKLPDGEAYSPQPSPAGAPVIHK*TSTTTL
Trigger: GAGTGTGGTGGTGCTGGTGCATTTGTGGATGACAGG...TGCTCCTGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp TGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCTCCGGCCTCTGGATGTaGAGCTCTGTGCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: CQLRAGPASGPDFGLLLTSGLWM*SSVPES
Trigger: TGACTCTGGCACAGAGCTCCACATCCAGAGGCCGGA...GGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp GCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGAACAGCAGAGCCCTCTaGTGTCACTGTAGTAACGGA +
Preference number: 4 (lower is better)
Translates to: ASGPDFGLLLTRPGGLWWNSRAL*CHCSNG
Trigger: TCCGTTACTACAGTGACACCAGAGGGCTCTGCTGTT...CCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp TCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCTGCCCTGCTGGGAAATaGCTTTGTGAACAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SGSLEAPGWRGLQPPAFPCPAGK*LCEQQS
Trigger: GCTCTGCTGTTCACAAAGCCATTTCCCAGCAGGGCA...GGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp GGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTAGAAGTGAAGCTTaGACTGGTGTGGAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GPDFGLLLTRPGGLWWALCRSEA*TGVEGG
Trigger: ACCACCTTCCACACCAGTCCAAGCTTCACTTCTACA...CAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp GACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGTGGGTGCATTGCTCCTaGAAGTCAAAGCCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: DFGLLLTRPGGLWWALCLWVHCS*KSKPGV
Trigger: GACTCCGGGCTTTGACTTCCAGGAGCAATGCACCCA...CAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp GAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGTCTGGTCTTCCCAGATaGCCGTCTTCTGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: ESGSSRMERLTAPSLPQQSGLPR*PSSGRC
Trigger: GCATCTTCCAGAAGACGGCCATCTGGGAAGACCAGA...CTGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp GACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGTGGGAAATGGCTTTGTaGACAGCAGAGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: DFGLLLTRPGGLWWALCLWEMAL*TAEPSG
Trigger: ACCAGAGGGCTCTGCTGTTCACAAAGCCATTTCCCA...CAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp AGGCTTCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTGGTAAAAGGGTCGCTTaGACTGGGTGTGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: RLLGVWKLPDGEAYSPQPGKRVA*TGCGCR
Trigger: TCTGCATCCACACCCAGTTCAAGCGACCCTTTTACC...AGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGAAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp ACTGGCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTGTAACACTGTGTGAGTaGAGCCTGGGCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TGQVCQLRAGPASGPDFGVTLCE*SLGCQG
Trigger: TCCCTGACAGCCCAGGCTTCACTCACACAGTGTTAC...ACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp CCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTCACCCCTCTATACTaGGGAAGATTGTCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PDFGLLLTRPGGLWWALCFTPLY*GRLSPF
Trigger: GAAGGGCGACAATCTTCCTCAGTATAGAGGGGTGAA...ACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp TCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCTCCTTTCGCCACTCTTaGGGCACATCATACTGTTCC +
Preference number: 4 (lower is better)
Translates to: SGSLEAPGWRGLQPPAFPSFRHS*GTSYCS
Trigger: GGAACAGTATGATGTGCCTCAAGAGTGGCGAAAGGA...GGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp CCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCTGAACAGAGCTAGAGGCTCACACAGTGGATaGTACCATCTCCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PRRLVVGSVFAALLNRARGSHSG*YHLRPL
Trigger: CAGAGGCCGGAGATGGTAGCATCCACTGTGTGAGCC...TCTAGCTCTGTTCAGGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR GCA 90 bp GGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCACCTTGCTCGACTGTCTaGTTCTCCAAAACCTCACCA +
Preference number: 4 (lower is better)
Translates to: GVWKLPDGEAYSPQPSPAPCSTV*FSKTSP
Trigger: TGGTGAGGTTTTGGAGAAGCAGACAGTCGAGCAAGG...TGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp CTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCTGAACAGAGTGCTCTTCCCTTaGTCGACTGTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LDPPRRLVVGSVFAALLNRVLFP*STVCFS
Trigger: GGAGAAGCAGACAGTCGAGCAAGGGAAGAGCACTCT...GTTCAGGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp ACTGGCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTGGAAGATGCCAGGGGTaGCTTCCTTTCGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: TGQVCQLRAGPASGPDFGGRCQG*LPFATL
Trigger: AAGAGTGGCGAAAGGAAGGCACCCCTGGCATCTTCC...ACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp TGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGGAGCAGCGACTTCGTTCCTTTaGTGCACTTGTTCACACAGG +
Preference number: 4 (lower is better)
Translates to: WKLPDGEAYSPQPSPAGAATSFL*CTCSHR
Trigger: CCTGTGTGAACAAGTGCACCAAAGGAACGAAGTCGC...TGCTCCTGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp CTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGTGTTTTGTTGCAGTTaGGCCCGTGATAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: LRAGPASGPDFGLLLTRPVFCCS*ARDKCD
Trigger: GTCACATTTATCACGGGCTCAACTGCAACAAAACAC...GGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp TGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGGAGCAGAGTGTTTGGTCTGGTaGTCTGGAGCTACTGTAAAG +
Preference number: 4 (lower is better)
Translates to: WKLPDGEAYSPQPSPAGAECLVW*SGATVK
Trigger: CTTTACAGTAGCTCCAGATCACCAGACCAAACACTC...TGCTCCTGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp GACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGGCTGTGGAAGGCTGTTaGTTCCTGACCAATGTCTGT +
Preference number: 4 (lower is better)
Translates to: DFGLLLTRPGGLWWALCLAVEGC*FLTNVC
Trigger: ACAGACATTGGTCAGGAATCAACAGCCTTCCACAGC...CAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp AGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGATACCTAAAGTGGCGTTaGGTTTTTCCGGGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: RAGPASGPDFGLLLTRPGYLKWR*VFPGFL
Trigger: TAGAAACCCCGGAAAAACTCAACGCCACTTTAGGTA...TCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp CCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCTGAACAGAGCTTCTCAAGGCCGAATCTaGTCTCCCTCAGATTCTGGT +
Preference number: 4 (lower is better)
Translates to: PPRRLVVGSVFAALLNRASQGRI*SPSDSG
Trigger: ACCAGAATCTGAGGGAGAGCAGATTCGGCCTTGAGA...AGCTCTGTTCAGGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR GCA 90 bp TGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCGGATGTGGAGCTCTGTaGCAGAGTCAACAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: CQLRAGPASGPDFGLLLTGCGAL*QSQQSP
Trigger: TGGAGACTGTTGACTCTGGCACAGAGCTCCACATCC...GGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR GCA 90 bp CCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTACTTCGTTCCTTTGGTaGACTTGTTCACACAGGCCA +
Preference number: 4 (lower is better)
Translates to: PDFGLLLTRPGGLWWALCTSFLW*TCSHRP
Trigger: TGGCCTGTGTGAACAAGTGCACCAAAGGAACGAAGT...ACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp CCGAGGCTTCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGTCATACTGTTCCCTGTaGCGTTTTCTCTGGGATAGG +
Preference number: 4 (lower is better)
Translates to: PRLLGVWKLPDGEAYSPQSYCSL*RFLWDR
Trigger: CCTATCCCAGAGAAAACGGCACAGGGAACAGTATGA...CTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGAAGCCTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp TGGCTCACACAGTGGATGCTACCATCTCCGGCCTCTGGATGTGGAGCTCTGTGCCAACAGTCTCCAGGGTaGGCCGGAAGTTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: WLTQWMLPSPASGCGALCQQSPG*AGSCCR
Trigger: CCTACAACAACTTCCGGCCCACCCTGGAGACTGTTG...GCACAGAGCTCCACATCCAGAGGCCGGAGATGGTAGCATCCACTGTGTGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305119.3
CDS-3UTR CCA 90 bp CTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCTGAACGAGCGGGCAGAAATGTaGGTTGTTGGAATTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LDPPRRLVVGSVFAALLNERAEM*VVGIEL
Trigger: GAGCTCAATTCCAACAACCCACATTTCTGCCCGCTC...GTTCAGGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp CCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCTGAACAGAGCTAGATGTGTGAGTGAAGCCTaGGCTGTCAGGGAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PRRLVVGSVFAALLNRARCVSEA*AVREGC
Trigger: ACACCCTTCCCTGACAGCCCAGGCTTCACTCACACA...TCTAGCTCTGTTCAGGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp CCGAGGCTTCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCAAATTTGTCCTTCCTaGCACAACCCTGGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: PRLLGVWKLPDGEAYSPQQICPS*HNPGAK
Trigger: CTTAGCACCAGGGTTGTGCCAGGAAGGACAAATTTG...CTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGAAGCCTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp AGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAAAGTTCTGGTATTCCTaGGAGGATGCGTCATTCATC +
Preference number: 4 (lower is better)
Translates to: RAGPASGPDFGLLLTRPGKFWYS*EDASFI
Trigger: GATGAATGACGCATCCTCCCAGGAATACCAGAACTT...TCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp TGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGGAGCAGCAGACCTGTGGAAATaGTTTTTCTGCCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: WKLPDGEAYSPQPSPAGAADLWK*FFCLLR
Trigger: TCTGAGAAGGCAGAAAAATCATTTCCACAGGTCTGC...TGCTCCTGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp TGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGGAGCAGACATTGTGTTGCTGTaGGAAAACGCTGTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: WKLPDGEAYSPQPSPAGADIVLL*ENAVVS
Trigger: TGAAACCACAGCGTTTTCTCACAGCAACACAATGTC...TGCTCCTGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp CCGAGGCTTCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGGTTGCAGCTGACATGTaGCCAGGTTACAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: PRLLGVWKLPDGEAYSPQVAADM*PGYSSF
Trigger: AAATGAACTGTAACCTGGGCACATGTCAGCTGCAAC...CTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGAAGCCTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp ACTGGCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTTCTCAAGGCCGAATCTaGTCTCCCTCAGATTCTGGT +
Preference number: 4 (lower is better)
Translates to: TGQVCQLRAGPASGPDFGSQGRI*SPSDSG
Trigger: ACCAGAATCTGAGGGAGAGCAGATTCGGCCTTGAGA...ACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR GCA 90 bp CAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCGAATGGACATTGTGTTaGTGTGAGAAAACGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QLRAGPASGPDFGLLLTREWTLC*CEKTLW
Trigger: CCACAGCGTTTTCTCACAGCAACACAATGTCCATTC...GCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp ACTGGCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCAGTTGCGTCTGAGCTaGTGTGGAAGGCTGTTGATT +
Preference number: 4 (lower is better)
Translates to: TGQVCQLRAGPASGPDFGQLRLS*CGRLLI
Trigger: AATCAACAGCCTTCCACAGCAGCTCAGACGCAACTG...ACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp GGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCCTGTGCCGTTTTCTCTaGGATAGGCTGAATAAGATG +
Preference number: 4 (lower is better)
Translates to: GLLLTRPGGLWWALCLQLLCRFL*DRLNKM
Trigger: CATCTTATTCAGCCTATCCCAGAGAAAACGGCACAG...GAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CCA 90 bp GACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGTGTGTTGACTCTGCTTaGCTATACAAGCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: DFGLLLTRPGGLWWALCLCVDSA*LYKLVG
Trigger: ACCCACCAGCTTGTATAGCCAAGCAGAGTCAACACA...CAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp GCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCAAGTGCTATGATTTATaGCTGTCTCCTGACGCTCCT +
Preference number: 4 (lower is better)
Translates to: AKSVSSEQDRLQGLTSVSKCYDL*LSPDAP
Trigger: AGGAGCGTCAGGAGACAGTCATAAATCATAGCACTT...GGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp CCGAGGCTTCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGTTACTGTTGAGCCTGTaGTTTGAGAGAAACCAGAGA +
Preference number: 4 (lower is better)
Translates to: PRLLGVWKLPDGEAYSPQLLLSL*FERNQR
Trigger: TCTCTGGTTTCTCTCAAATCACAGGCTCAACAGTAA...CTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGAAGCCTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp GACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGTTCTTGAGCAAAAGATaGAGTTGTGATGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: DFGLLLTRPGGLWWALCLFLSKR*SCDAAR
Trigger: CCTGGCAGCATCACAACTTCATCTTTTGCTCAAGAA...CAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp TGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCAAGGCTGTTGATTCCTaGCCAATGTCTGTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: CQLRAGPASGPDFGLLLTKAVDS*PMSVVV
Trigger: CACAACCACAGACATTGGTCAGGAATCAACAGCCTT...GGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp CAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCAGGTTACAGTTCATTTaGGACTTCGTTCCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: QLRAGPASGPDFGLLLTRRLQFI*DFVPLV
Trigger: CACCAAAGGAACGAAGTCGCAAATGAACTGTAACCT...GCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR GCA 90 bp ACTGGCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTGGTGTTGTGGCAGTaGTGGCTAATGTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: TGQVCQLRAGPASGPDFGLVLWQ*WLMLFP
Trigger: TGGAAACAACATTAGCCAGCACTGCCACAACACCAG...ACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp CAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCGTATTCCTGGGAGGATaGGTCATTCATCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: QLRAGPASGPDFGLLLTRVFLGG*VIHLFC
Trigger: ACAGAAAAGATGAATGACGCATCCTCCCAGGAATAC...GCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp CTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCACAGTATGGCCTTTCTaGAGGAATCAGGATCAAGAA +
Preference number: 4 (lower is better)
Translates to: LLLTRPGGLWWALCLQLSTVWPF*RNQDQE
Trigger: TTCTTGATCCTGATTCCTGCAGAAAGGCCATACTGT...GGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp TCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCTGTGTAAGTAGGGGATaGGCTGATGTAGAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SGSLEAPGWRGLQPPAFPCVSRG*ADVESC
Trigger: ACAACTTTCTACATCAGCCCATCCCCTACTTACACA...GGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp CGTTGGCTCACACAGTGGATGCTACCATCTCCGGCCTCTGGATGTGGAGCTCTGTCAGATTCTGGTCTGTaGCGTTTTCTCTGGGATAGG +
Preference number: 4 (lower is better)
Translates to: RWLTQWMLPSPASGCGALSDSGL*RFLWDR
Trigger: CCTATCCCAGAGAAAACGGCACAGACCAGAATCTGA...CAGAGCTCCACATCCAGAGGCCGGAGATGGTAGCATCCACTGTGTGAGCCAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305119.3
CDS-3UTR CCA 90 bp GAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGTATTACCTCCAATACTaGTGTTTACTGTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ESGSSRMERLTAPSLPQQYYLQY*CLLLSL
Trigger: CAGGCTCAACAGTAAACACCAGTATTGGAGGTAATA...CTGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp ACTGGCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCCTGAGGTAGTAAAATaGGCAGGTAAGGGTGTGATT +
Preference number: 4 (lower is better)
Translates to: TGQVCQLRAGPASGPDFGPEVVK*AGKGVI
Trigger: AATCACACCCTTACCTGCCCATTTTACTACCTCAGG...ACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CCA 90 bp CACAGTGGATGCTACCATCTCCGGCCTCTGGATGTGGAGCTCTGTGCCAGAGTCCTGTGCCGTTTTCTCTaGGATAGGCTGAATAAGATG +
Preference number: 4 (lower is better)
Translates to: HSGCYHLRPLDVELCARVLCRFL*DRLNKM
Trigger: CATCTTATTCAGCCTATCCCAGAGAAAACGGCACAG...GACTCTGGCACAGAGCTCCACATCCAGAGGCCGGAGATGGTAGCATCCACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305119.3
CDS-3UTR CCA 90 bp TGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGGAGCAATTGTTGACTATGAATaGACATTGTGTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: WKLPDGEAYSPQPSPAGAIVDYE*TLCCCE
Trigger: CTCACAGCAACACAATGTCCATTCATAGTCAACAAT...TGCTCCTGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR GCA 90 bp TCACACAGTGGATGCTACCATCTCCGGCCTCTGGATGTGGAGCTCTGTGCCAGAGTTGCAGCTGACATGTaGCCAGGTTACAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: SHSGCYHLRPLDVELCARVAADM*PGYSSF
Trigger: AAATGAACTGTAACCTGGGCACATGTCAGCTGCAAC...TCTGGCACAGAGCTCCACATCCAGAGGCCGGAGATGGTAGCATCCACTGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305119.3
CDS-3UTR CCA 90 bp GCTTTCAGATTTGCTTTTATTGGTAGGGAAATTCCAGAGTGGGGAGCCACCCAGCTCTCCCTCAGATTCTaGTCTTCCCAGATGGCCGTC +
Preference number: 4 (lower is better)
Translates to: AFRFAFIGREIPEWGATQLSLRF*SSQMAV
Trigger: GACGGCCATCTGGGAAGACCAGAATCTGAGGGAGAG...CTGGGTGGCTCCCCACTCTGGAATTTCCCTACCAATAAAAGCAAATCTGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp GCTTTCAGATTTGCTTTTATTGGTAGGGAAATTCCAGAGTGGGGAGCCACCCAGTTCTGCAATGCGGCCTaGGGTAGTAAAATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AFRFAFIGREIPEWGATQFCNAA*GSKMGR
Trigger: CCTGCCCATTTTACTACCTCAGGCCGCATTGCAGAA...CTGGGTGGCTCCCCACTCTGGAATTTCCCTACCAATAAAAGCAAATCTGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR TCA 90 bp GCTTTCAGATTTGCTTTTATTGGTAGGGAAATTCCAGAGTGGGGAGCCACCCAGGTTGAGCCTGTGATTTaGGAGAAACCAGAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: AFRFAFIGREIPEWGATQVEPVI*EKPEKV
Trigger: CACTTTCTCTGGTTTCTCTCAAATCACAGGCTCAAC...CTGGGTGGCTCCCCACTCTGGAATTTCCCTACCAATAAAAGCAAATCTGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS CCA 90 bp CTCCGACCCTGCATCACTGGGCTGCGGGTAAGTGCAGAGCCTGCCTaGGGAGCCGCCCGCTGGACCCCGGAACAGGAGGGAGCGGAGCAG +
Preference number: 5 (lower is better)
Translates to: LRPCITGLRVSAEPA*GAARWTPEQEGAEQ
Trigger: CTGCTCCGCTCCCTCCTGTTCCGGGGTCCAGCGGGCGGCTCCCCAGGCAGGCTCTGCACTTACCCGCAGCCCAGTGATGCAGGGTCGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474482.1
CDS GCA 90 bp CATCTGCCCTACGCCCTTTCCCACTGCCGACCACCCCTCCGACCCTaGATCACTGGGCTGCGGGTAAGTGCAGAGCCTGCCTGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: HLPYALSHCRPPLRP*ITGLRVSAEPAWGA
Trigger: GGCTCCCCAGGCAGGCTCTGCACTTACCCGCAGCCCAGTGATGCAGGGTCGGAGGGGTGGTCGGCAGTGGGAAAGGGCGTAGGGCAGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474482.1
CDS-3UTR CAA 90 bp CCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGACCCGCCCCGGAGGCTaGTGGTGGGCTCTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: PASGPDFGLLLTRPGGLWTRPGG*WWALCL
Trigger: CAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGT...CCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CAA 90 bp AGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGTGGGAGGCCCCCGTaGGCTCACACAGTGGATGCT +
Preference number: 5 (lower is better)
Translates to: RAGPASGPDFGLLLTRPGGGRPP*AHTVDA
Trigger: AGCATCCACTGTGTGAGCCAACGGGGGCCTCCCACC...TCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CAA 90 bp AGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAACCCGCCCCGGAGGCTaGTGGTGGGCTCTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: RAGPASGPDFGLLLTRPGTRPGG*WWALCL
Trigger: CAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGT...TCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CAA 90 bp CTGGCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCGCGGGGGCCACTGCGTaGCAGCTGACATGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LAKSVSSEQDRLQGLTSVAGATA*QLTCAQ
Trigger: CTGGGCACATGTCAGCTGCAACGCAGTGGCCCCCGC...GACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CAA 90 bp CCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTGGTGGGAGGCCCCCGTaGGCTCACACAGTGGATGCT +
Preference number: 5 (lower is better)
Translates to: PDFGLLLTRPGGLWWALCGGRPP*AHTVDA
Trigger: AGCATCCACTGTGTGAGCCAACGGGGGCCTCCCACC...ACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CAA 90 bp CCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTGACTTCGGTCTCCTCTaGACCCGCCCCGGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: PDFGLLLTRPGGLWWALCDFGLL*TRPGGL
Trigger: CAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTC...ACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS GCA 90 bp CCAGGGTGGGCCGGAAGTTGTTGTAGGCGTTCTCAAGGCCGAATCTaGTCTCCCTCAGATTCTGGTCTGGGGAGCCGCCCGCTGGACCCC +
Preference number: 5 (lower is better)
Translates to: PGWAGSCCRRSQGRI*SPSDSGLGSRPLDP
Trigger: GGGGTCCAGCGGGCGGCTCCCCAGACCAGAATCTGAGGGAGAGCAGATTCGGCCTTGAGAACGCCTACAACAACTTCCGGCCCACCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467414.1
CDS CCA 90 bp ACGCTCCTTCTCTCTGGCTCCTGCAGCCCTTGCCTGCTCACTAAGTaGGAGCCCCAGGCTAAAGCCCTCGGCTCTGCCATCCCCGTCGTC +
Preference number: 5 (lower is better)
Translates to: TLLLSGSCSPCLLTK*EPQAKALGSAIPVV
Trigger: GACGACGGGGATGGCAGAGCCGAGGGCTTTAGCCTGGGGCTCCCACTTAGTGAGCAGGCAAGGGCTGCAGGAGCCAGAGAGAAGGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS GCA 90 bp CAAAAGGAAGAGTCAGCCCGGCATCTGCCCTACGCCCTTTCCCACTaGCGACCACCCCTCCGACCCTGCATCACTGGGCTGCGGGTAAGT +
Preference number: 5 (lower is better)
Translates to: QKEESARHLPYALSH*RPPLRPCITGLRVS
Trigger: ACTTACCCGCAGCCCAGTGATGCAGGGTCGGAGGGGTGGTCGGCAGTGGGAAAGGGCGTAGGGCAGATGCCGGGCTGACTCTTCCTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474482.1
CDS-3UTR CAA 90 bp CTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCAGTGTGTGTTCGTATTaGGGCACAGGCAGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: LLLTRPGGLWWALCLQLSSVCSY*GTGSGG
Trigger: GCCCCCGCTGCCTGTGCCCAAATACGAACACACACT...GGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CAA 90 bp GCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGCACTACGGCCGGAGGTaGTGGAGCTCTCAGGAAAGT +
Preference number: 5 (lower is better)
Translates to: ASGPDFGLLLTRPGGLWWHYGRR*WSSQES
Trigger: ACTTTCCTGAGAGCTCCACAACCTCCGGCCGTAGTG...CCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp TTGGCTCACACAGTGGATGCTACCATCTCCGGCCTCTGGATGTGGAGCTCTGTGGCGGGGGCCACTGCGTaGCAGCTGACATGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LAHTVDATISGLWMWSSVAGATA*QLTCAQ
Trigger: CTGGGCACATGTCAGCTGCAACGCAGTGGCCCCCGC...CACAGAGCTCCACATCCAGAGGCCGGAGATGGTAGCATCCACTGTGTGAGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305119.3
CDS-3UTR CAA 90 bp TGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGGAGCAGGCTGCTGTGGTAGCTaGTATGTGCTAGGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: WKLPDGEAYSPQPSPAGAGCCGS*YVLGQL
Trigger: CAGCTGCCCTAGCACATACAAGCTACCACAGCAGCC...TGCTCCTGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp CTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCAGCCTTCTGGGTGCATaGCTCCTGGAAGTCAAAGCC +
Preference number: 5 (lower is better)
Translates to: LRAGPASGPDFGLLLTRPSLLGA*LLEVKA
Trigger: GGCTTTGACTTCCAGGAGCAATGCACCCAGAAGGCT...GGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp TTGGCTCACACAGTGGATGCTACCATCTCCGGCCTCTGGATGTGGAGCTCTGTGGACTTCGGTCTCCTCTaGACCCGCCCCGGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: LAHTVDATISGLWMWSSVDFGLL*TRPGGL
Trigger: CAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTC...CACAGAGCTCCACATCCAGAGGCCGGAGATGGTAGCATCCACTGTGTGAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305119.3
CDS-3UTR CAA 90 bp TCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCCAGAGTGCTCTTCCCTaGCTCGACTGTCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SGSLEAPGWRGLQPPAFPQSALP*LDCLLL
Trigger: GAGAAGCAGACAGTCGAGCAAGGGAAGAGCACTCTG...GGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp TCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCCGGCAGGTAAGACTGTaGTTGCCATTGCATCTGGGC +
Preference number: 5 (lower is better)
Translates to: SGSLEAPGWRGLQPPAFPRQVRL*LPLHLG
Trigger: GCCCAGATGCAATGGCAACAACAGTCTTACCTGCCG...GGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp TCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGGCTCTTGGCGATGTaGAATTCACAGGTCTCTCCC +
Preference number: 5 (lower is better)
Translates to: SGSLEAPGWRGLQPPAFPRLLAM*NSQVSP
Trigger: GGGAGAGACCTGTGAATTCAACATCGCCAAGAGCCT...GGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp GGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCACAGGTAAGACTGTTGTaGCCATTGCATCTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: GVWKLPDGEAYSPQPSPAQVRLL*PLHLGC
Trigger: GCAGCCCAGATGCAATGGCAACAACAGTCTTACCTG...TGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp CAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCACCATGAACTGAGGTaGTGGTGCTGTGAGGGAACA +
Preference number: 5 (lower is better)
Translates to: QLRAGPASGPDFGLLLTRHHELR*WCCEGT
Trigger: TGTTCCCTCACAGCACCACAACCTCAGTTCATGGTG...GCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp AGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAAGGATGACATCGTTCTaGACCACGATGCTACCGTTG +
Preference number: 5 (lower is better)
Translates to: RAGPASGPDFGLLLTRPGRMTSF*TTMLPL
Trigger: CAACGGTAGCATCGTGGTCAAGAACGATGTCATCCT...TCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp TCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCGTTCCTTTGGTGCACTaGTTCACACAGGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SGSLEAPGWRGLQPPAFPVPLVH*FTQASF
Trigger: GAAGCTGGCCTGTGTGAACAAGTGCACCAAAGGAAC...GGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS CCA 90 bp CAATGTGCCCTGCTGGGAAATGGCTTTGTGAACAGCAGAGCCCTCTaGTGTCACTGTAGTAACGGACGCGCAGAGCCGGAGAGCCAGCGT +
Preference number: 5 (lower is better)
Translates to: QCALLGNGFVNSRAL*CHCSNGRAEPESQR
Trigger: ACGCTGGCTCTCCGGCTCTGCGCGTCCGTTACTACAGTGACACCAGAGGGCTCTGCTGTTCACAAAGCCATTTCCCAGCAGGGCACATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp GCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGACGCTGTTGTGTGTGTaGACTCTGCTTGGCTATACA +
Preference number: 5 (lower is better)
Translates to: ASGPDFGLLLTRPGGLWWTLLCV*TLLGYT
Trigger: TGTATAGCCAAGCAGAGTCAACACACACAACAGCGT...CCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp CAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCACAGTGTTGTCTCAGTaGAGCCTGGCTTACTGTGGA +
Preference number: 5 (lower is better)
Translates to: QLRAGPASGPDFGLLLTRTVLSQ*SLAYCG
Trigger: TCCACAGTAAGCCAGGCTCAACTGAGACAACACTGT...GCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp GGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGACATCCATCCGATTCTaGAAGAGGGTACTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: GPDFGLLLTRPGGLWWALTSIRF*KRVLKF
Trigger: GAACTTCAGTACCCTCTTCAAGAATCGGATGGATGT...CAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS GCA 90 bp CCAGGGTGGGCCGGAAGTTGTTGTAGGCGTTCTCAAGGCCGAATCTaGTCTCCCTCAGATTCTGGTCTTCCCAGATGGCCGTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: PGWAGSCCRRSQGRI*SPSDSGLPRWPSSG
Trigger: TCCAGAAGACGGCCATCTGGGAAGACCAGAATCTGAGGGAGAGCAGATTCGGCCTTGAGAACGCCTACAACAACTTCCGGCCCACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS CCA 90 bp GCCTCTGGATGTGGAGCTCTGTGCCAGAGTCAACAGTCTCCAGGGTaGGCCGGAAGTTGTTGTAGGCGTTCTCAAGGCCGAATCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ASGCGALCQSQQSPG*AGSCCRRSQGRICS
Trigger: AGAGCAGATTCGGCCTTGAGAACGCCTACAACAACTTCCGGCCCACCCTGGAGACTGTTGACTCTGGCACAGAGCTCCACATCCAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000467414.1
ENST00000473098.5
ENST00000474482.1
ENST00000536621.6
CDS-3UTR CAA 90 bp AGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAAAGATTTTGTGTGTGTaGTGCTGCCGTGGAAAGTTG +
Preference number: 5 (lower is better)
Translates to: RAGPASGPDFGLLLTRPGKILCV*CCRGKL
Trigger: CAACTTTCCACGGCAGCACAACACACACAAAATCTT...TCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp AGGCTTCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTGCGACTTCGTTCCTTaGGTGCACTTGTTCACACAG +
Preference number: 5 (lower is better)
Translates to: RLLGVWKLPDGEAYSPQPCDFVP*VHLFTQ
Trigger: CTGTGTGAACAAGTGCACCAAAGGAACGAAGTCGCA...AGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGAAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS GCA 90 bp CCAGGGTGGGCCGGAAGTTGTTGTAGGCGTTCTCAAGGCCGAATCTaGTCTCCCTCAGATTCTGGTCTGTGCCGTTTTCTCTGGGATAGG +
Preference number: 5 (lower is better)
Translates to: PGWAGSCCRRSQGRI*SPSDSGLCRFLWDR
Trigger: CCTATCCCAGAGAAAACGGCACAGACCAGAATCTGAGGGAGAGCAGATTCGGCCTTGAGAACGCCTACAACAACTTCCGGCCCACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305119.3
CDS-3UTR CAA 90 bp CGTTGGCTCACACAGTGGATGCTACCATCTCCGGCCTCTGGATGTGGAGCTCTGAGGCTCTTGGCGATGTaGAATTCACAGGTCTCTCCC +
Preference number: 5 (lower is better)
Translates to: RWLTQWMLPSPASGCGALRLLAM*NSQVSP
Trigger: GGGAGAGACCTGTGAATTCAACATCGCCAAGAGCCT...CAGAGCTCCACATCCAGAGGCCGGAGATGGTAGCATCCACTGTGTGAGCCAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305119.3
CDS-3UTR CAA 90 bp CCTGACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTGTGTGGATGCAGAAGTaGTATTACCTCCAATACTGG +
Preference number: 5 (lower is better)
Translates to: PDFGLLLTRPGGLWWALCVWMQK*YYLQYW
Trigger: CCAGTATTGGAGGTAATACAACTTCTGCATCCACAC...ACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp ACTGGCCAAGTCTGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCAGTGCTGGCTAATGTaGTTTCCATTGAGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: TGQVCQLRAGPASGPDFGQCWLM*FPLSLE
Trigger: CTCCAGGCTCAATGGAAACAACATTAGCCAGCACTG...ACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACAGACTTGGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp GGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCATACCTAAAGTGGCGTaGAGTTTTTCCGGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: GLLLTRPGGLWWALCLQLIPKVA*SFSGVS
Trigger: AGAAACCCCGGAAAAACTCAACGCCACTTTAGGTAT...GAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS TCA 90 bp GTGTTCGTATTTGGGCACAGGCAGCGGGGGCCACTGCGTTGCAGCTaGCATGTGCCCAGGTTACAGTTCATTTGCGACTTCGTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: VFVFGHRQRGPLRCS*HVPRLQFICDFVPL
Trigger: CAAAGGAACGAAGTCGCAAATGAACTGTAACCTGGGCACATGTCAGCTGCAACGCAGTGGCCCCCGCTGCCTGTGCCCAAATACGAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.6
CDS GCA 90 bp TATTTGGGCACAGGCAGCGGGGGCCACTGCGTTGCAGCTGACATGTaGCCAGGTTACAGTTCATTTGCGACTTCGTTCCTTTGGTGCACT +
Preference number: 5 (lower is better)
Translates to: YLGTGSGGHCVAADM*PGYSSFATSFLWCT
Trigger: AGTGCACCAAAGGAACGAAGTCGCAAATGAACTGTAACCTGGGCACATGTCAGCTGCAACGCAGTGGCCCCCGCTGCCTGTGCCCAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.6
CDS-3UTR CAA 90 bp GACTTCGGTCTCCTCTTGACCCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGGTTACAGTTCATTaGCGACTTCGTTCCTTTGGT +
Preference number: 5 (lower is better)
Translates to: DFGLLLTRPGGLWWALCLQVTVH*RLRSFG
Trigger: ACCAAAGGAACGAAGTCGCAAATGAACTGTAACCTG...CAAACACAGAGCCCACCACAAGCCTCCGGGGCGGGTCAAGAGGAGACCGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CAA 90 bp CCGCCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCTGAACAGAGCTCAGGTTACAGTTCATTaGCGACTTCGTTCCTTTGGT +
Preference number: 5 (lower is better)
Translates to: PPRRLVVGSVFAALLNRAQVTVH*RLRSFG
Trigger: ACCAAAGGAACGAAGTCGCAAATGAACTGTAACCTG...AGCTCTGTTCAGGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CAA 90 bp CCCCGGAGGCTTGTGGTGGGCTCTGTGTTTGCAGCTCTCCTGAACAGAGCTAGACCATACACGAGGCTCTaGGCGATGTTGAATTCACAG +
Preference number: 5 (lower is better)
Translates to: PRRLVVGSVFAALLNRARPYTRL*AMLNSQ
Trigger: CTGTGAATTCAACATCGCCAAGAGCCTCGTGTATGG...TCTAGCTCTGTTCAGGAGAGCTGCAAACACAGAGCCCACCACAAGCCTCCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305119.3
ENST00000379442.7
CDS-3UTR CAA 90 bp TCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCGACTATGAATGGACATaGTGTTGCTGTGAGAAAACG +
Preference number: 5 (lower is better)
Translates to: SGSLEAPGWRGLQPPAFPDYEWT*CCCEKT
Trigger: CGTTTTCTCACAGCAACACAATGTCCATTCATAGTC...GGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp CAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCCGCAGGGAAGGGTGTAGATaGTTGACTATGAATGGACAT +
Preference number: 5 (lower is better)
Translates to: QLRAGPASGPDFGLLLTRREGCR*LTMNGH
Trigger: ATGTCCATTCATAGTCAACAATCTACACCCTTCCCT...GCGGGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp TGTCAGCTCAGAGCAGGACCGGCTTCAGGGCCTGACTTCGGTCTCCTCTTGACCTTCCTTTCGCCACTCTaGAGGCACATCATACTGTTC +
Preference number: 5 (lower is better)
Translates to: CQLRAGPASGPDFGLLLTFLSPL*RHIILF
Trigger: GAACAGTATGATGTGCCTCAAGAGTGGCGAAAGGAA...GGTCAAGAGGAGACCGAAGTCAGGCCCTGAAGCCGGTCCTGCTCTGAGCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS GCA 90 bp GATTCTGGTCTTCCCAGATGGCCGTCTTCTGGAAGATGCCAGGGGTaGCTTCCTTTCGCCACTCTTGAGGCACATCATACTGTTCCCTGT +
Preference number: 5 (lower is better)
Translates to: DSGLPRWPSSGRCQG*LPFATLEAHHTVPC
Trigger: ACAGGGAACAGTATGATGTGCCTCAAGAGTGGCGAAAGGAAGGCACCCCTGGCATCTTCCAGAAGACGGCCATCTGGGAAGACCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS GCA 90 bp TCTCCCTCAGATTCTGGTCTTCCCAGATGGCCGTCTTCTGGAAGATaGCAGGGGTGCCTTCCTTTCGCCACTCTTGAGGCACATCATACT +
Preference number: 5 (lower is better)
Translates to: SPSDSGLPRWPSSGR*QGCLPFATLEAHHT
Trigger: AGTATGATGTGCCTCAAGAGTGGCGAAAGGAAGGCACCCCTGGCATCTTCCAGAAGACGGCCATCTGGGAAGACCAGAATCTGAGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS-3UTR CAA 90 bp TCACACAGTGGATGCTACCATCTCCGGCCTCTGGATGTGGAGCTCTGTGCCAGACCATACACGAGGCTCTaGGCGATGTTGAATTCACAG +
Preference number: 5 (lower is better)
Translates to: SHSGCYHLRPLDVELCARPYTRL*AMLNSQ
Trigger: CTGTGAATTCAACATCGCCAAGAGCCTCGTGTATGG...TCTGGCACAGAGCTCCACATCCAGAGGCCGGAGATGGTAGCATCCACTGTGTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305119.3
CDS-3UTR CAA 90 bp CCGAGGCTTCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCTAATGTTGTTTCCATaGAGCCTGGAGAGATATAGA +
Preference number: 5 (lower is better)
Translates to: PRLLGVWKLPDGEAYSPQLMLFP*SLERYR
Trigger: TCTATATCTCTCCAGGCTCAATGGAAACAACATTAG...CTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGAAGCCTCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp GGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGTTTCATTCATAATCTaGGCCTTTACAATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: GVWKLPDGEAYSPQPSPAVSFII*AFTISA
Trigger: GGCAGAGATTGTAAAGGCCAAGATTATGAATGAAAC...TGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS TCA 90 bp CCATCACAGCCCCCACGATCCCATACACGAGGCTCTTGGCGATGTTaGATTCACAGGTCTCTCCCCAGTACCAGTGTGTGTTCGTATTTG +
Preference number: 5 (lower is better)
Translates to: PSQPPRSHTRGSWRC*IHRSLPSTSVCSYL
Trigger: CAAATACGAACACACACTGGTACTGGGGAGAGACCTGTGAATTCAACATCGCCAAGAGCCTCGTGTATGGGATCGTGGGGGCTGTGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.6
CDS-3UTR CAA 90 bp GCTTCTGGGAGTCTGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCGAAGGGTGTAGATTGTaGACTATGAATGGACATTGT +
Preference number: 5 (lower is better)
Translates to: ASGSLEAPGWRGLQPPAFEGCRL*TMNGHC
Trigger: ACAATGTCCATTCATAGTCAACAATCTACACCCTTC...GAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCAGACTCCCAGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS-3UTR CAA 90 bp TGGAAGCTCCCGGATGGAGAGGCTTACAGCCCCCAGCCTTCCCCAGCAGGAGCATCAGATTTGCTTTTATaGGTAGGGAAATTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: WKLPDGEAYSPQPSPAGASDLLL*VGKFQS
Trigger: ACTCTGGAATTTCCCTACCAATAAAAGCAAATCTGA...TGCTCCTGCTGGGGAAGGCTGGGGGCTGTAAGCCTCTCCATCCGGGAGCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS TCA 90 bp CTTCTGGGTGCATTGCTCCTGGAAGTCAAAGCCCGGAGTCACCGATaGATCCACGAAAGTGTCCTCTTCACTATAGCACAGTATGGCCTT +
Preference number: 5 (lower is better)
Translates to: LLGALLLEVKARSHR*IHESVLFTIAQYGL
Trigger: AAGGCCATACTGTGCTATAGTGAAGAGGACACTTTCGTGGATTCATCGGTGACTCCGGGCTTTGACTTCCAGGAGCAATGCACCCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS CCA 90 bp GCTGACATGTGCCCAGGTTACAGTTCATTTGCGACTTCGTTCCTTTaGTGCACTTGTTCACACAGGCCAGCTTCCCATCCAAGACATCCA +
Preference number: 5 (lower is better)
Translates to: ADMCPGYSSFATSFL*CTCSHRPASHPRHP
Trigger: TGGATGTCTTGGATGGGAAGCTGGCCTGTGTGAACAAGTGCACCAAAGGAACGAAGTCGCAAATGAACTGTAACCTGGGCACATGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS GCA 90 bp GACATGTGCCCAGGTTACAGTTCATTTGCGACTTCGTTCCTTTGGTaGACTTGTTCACACAGGCCAGCTTCCCATCCAAGACATCCACAT +
Preference number: 5 (lower is better)
Translates to: DMCPGYSSFATSFLW*TCSHRPASHPRHPH
Trigger: ATGTGGATGTCTTGGATGGGAAGCTGGCCTGTGTGAACAAGTGCACCAAAGGAACGAAGTCGCAAATGAACTGTAACCTGGGCACATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS-3UTR CAA 90 bp GCTTTCAGATTTGCTTTTATTGGTAGGGAAATTCCAGAGTGGGGAGCCACCCAGGTAACCAACGTAGCCTaGGGGACAGACGCATTGTTT +
Preference number: 5 (lower is better)
Translates to: AFRFAFIGREIPEWGATQVTNVA*GTDALF
Trigger: AAACAATGCGTCTGTCCCCAAGGCTACGTTGGTTAC...CTGGGTGGCTCCCCACTCTGGAATTTCCCTACCAATAAAAGCAAATCTGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS TCA 90 bp ACGATGCTACCGTTGAGCAATCTCCGAATGTTCACCCCTCTATACTaGGGAAGATTGTCGCCCTTCAAAACGACATCCATCCGATTCTTG +
Preference number: 5 (lower is better)
Translates to: TMLPLSNLRMFTPLY*GRLSPFKTTSIRFL
Trigger: CAAGAATCGGATGGATGTCGTTTTGAAGGGCGACAATCTTCCTCAGTATAGAGGGGTGAACATTCGGAGATTGCTCAACGGTAGCATCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS TCA 90 bp TGTGGATGCAGAAGTTGTATTACCTCCAATACTGGTGTTTACTGTTaGGCCTGTGATTTGAGAGAAACCAGAGAAAGTGCTATGATTTAT +
Preference number: 5 (lower is better)
Translates to: CGCRSCITSNTGVYC*ACDLRETRESAMIY
Trigger: ATAAATCATAGCACTTTCTCTGGTTTCTCTCAAATCACAGGCTCAACAGTAAACACCAGTATTGGAGGTAATACAACTTCTGCATCCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS GCA 72 bp ACCCCTCCGACCCTGCATCACTGGGCTGCGGGTAAGTaGAGAGCCTGCCTGGGGAGCCGCCCGCTGGACCCC +
Preference number: 6 (lower is better)
Translates to: TPPTLHHWAAGK*RACLGSRPLDP
Trigger: GGGGTCCAGCGGGCGGCTCCCCAGGCAGGCTCTGCACTTACCCGCAGCCCAGTGATGCAGGGTCGGAGGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474482.1
CDS GCA 72 bp ACCCTGCATCACTGGGCTGCGGGTAAGTGCAGAGCCTaGCTGGGGAGCCGCCCGCTGGACCCCGGAACAGGA +
Preference number: 6 (lower is better)
Translates to: TLHHWAAGKCRA*LGSRPLDPGTG
Trigger: TCCTGTTCCGGGGTCCAGCGGGCGGCTCCCCAGGCAGGCTCTGCACTTACCCGCAGCCCAGTGATGCAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474482.1
CDS GCA 72 bp GAGTCAGCCCGGCATCTGCCCTACGCCCTTTCCCACTaGCGACCACCCCTCCGACCCTGCATCACTGGGCTG +
Preference number: 6 (lower is better)
Translates to: ESARHLPYALSH*RPPLRPCITGL
Trigger: CAGCCCAGTGATGCAGGGTCGGAGGGGTGGTCGGCAGTGGGAAAGGGCGTAGGGCAGATGCCGGGCTGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474482.1
CDS CCA 72 bp CTCTCTGGCTCCTGCAGCCCTTGCCTGCTCACTAAGTaGGAGCCCCAGGCTAAAGCCCTCGGCTCTGCCATC +
Preference number: 6 (lower is better)
Translates to: LSGSCSPCLLTK*EPQAKALGSAI
Trigger: GATGGCAGAGCCGAGGGCTTTAGCCTGGGGCTCCCACTTAGTGAGCAGGCAAGGGCTGCAGGAGCCAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS GCA 72 bp GCCGGAAGTTGTTGTAGGCGTTCTCAAGGCCGAATCTaGTCTCCCTCAGATTCTGGTCTGGGGAGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: AGSCCRRSQGRI*SPSDSGLGSRP
Trigger: CGGGCGGCTCCCCAGACCAGAATCTGAGGGAGAGCAGATTCGGCCTTGAGAACGCCTACAACAACTTCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467414.1
CDS GCA 72 bp ATTTCCTCTGGCAAAAGGAAGAGTCAGCCCGGCATCTaGCCTACGCCCTTTCCCACTGCCGACCACCCCTCC +
Preference number: 6 (lower is better)
Translates to: ISSGKRKSQPGI*PTPFPTADHPS
Trigger: GGAGGGGTGGTCGGCAGTGGGAAAGGGCGTAGGGCAGATGCCGGGCTGACTCTTCCTTTTGCCAGAGGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474482.1
CDS CAA 90 bp AGCAGCACCGCCATCACAGCCCCCACGATCCCATACACGAGGCTCTaGGCGATGTTGAATTCACAGGTCTCTCCCCAGTACCAGTGTGTG +
Preference number: 6 (lower is better)
Translates to: SSTAITAPTIPYTRL*AMLNSQVSPQYQCV
Trigger: CACACACTGGTACTGGGGAGAGACCTGTGAATTCAACATCGCCAAGAGCCTCGTGTATGGGATCGTGGGGGCTGTGATGGCGGTGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.6
CDS TCA 72 bp TTTGGGCACAGGCAGCGGGGGCCACTGCGTTGCAGCTaGCATGTGCCCAGGTTACAGTTCATTTGCGACTTC +
Preference number: 6 (lower is better)
Translates to: FGHRQRGPLRCS*HVPRLQFICDF
Trigger: GAAGTCGCAAATGAACTGTAACCTGGGCACATGTCAGCTGCAACGCAGTGGCCCCCGCTGCCTGTGCCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.6
CDS GCA 72 bp GTGTGTTCGTATTTGGGCACAGGCAGCGGGGGCCACTaGGTTGCAGCTGACATGTGCCCAGGTTACAGTTCA +
Preference number: 6 (lower is better)
Translates to: VCSYLGTGSGGH*VAADMCPGYSS
Trigger: TGAACTGTAACCTGGGCACATGTCAGCTGCAACGCAGTGGCCCCCGCTGCCTGTGCCCAAATACGAACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.6
CDS CCA 72 bp CTGCTGGGAAATGGCTTTGTGAACAGCAGAGCCCTCTaGTGTCACTGTAGTAACGGACGCGCAGAGCCGGAG +
Preference number: 6 (lower is better)
Translates to: LLGNGFVNSRAL*CHCSNGRAEPE
Trigger: CTCCGGCTCTGCGCGTCCGTTACTACAGTGACACCAGAGGGCTCTGCTGTTCACAAAGCCATTTCCCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS GCA 72 bp ACAGGCAGCGGGGGCCACTGCGTTGCAGCTGACATGTaGCCAGGTTACAGTTCATTTGCGACTTCGTTCCTT +
Preference number: 6 (lower is better)
Translates to: TGSGGHCVAADM*PGYSSFATSFL
Trigger: AAGGAACGAAGTCGCAAATGAACTGTAACCTGGGCACATGTCAGCTGCAACGCAGTGGCCCCCGCTGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.6
CDS GCA 72 bp GCCGGAAGTTGTTGTAGGCGTTCTCAAGGCCGAATCTaGTCTCCCTCAGATTCTGGTCTTCCCAGATGGCCG +
Preference number: 6 (lower is better)
Translates to: AGSCCRRSQGRI*SPSDSGLPRWP
Trigger: CGGCCATCTGGGAAGACCAGAATCTGAGGGAGAGCAGATTCGGCCTTGAGAACGCCTACAACAACTTCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS GCA 72 bp CAGATTCTGGTCTCTATTCCAGTACGTGGTTCAGGCTaGAGACCCCTCCCGGAGATTCAGACAGGCACGAGC +
Preference number: 6 (lower is better)
Translates to: QILVSIPVRGSG*RPLPEIQTGTS
Trigger: GCTCGTGCCTGTCTGAATCTCCGGGAGGGGTCTGCAGCCTGAACCACGTACTGGAATAGAGACCAGAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473098.5
CDS CAA 72 bp GCCCCCACGATCCCATACACGAGGCTCTTGGCGATGTaGAATTCACAGGTCTCTCCCCAGTACCAGTGTGTG +
Preference number: 6 (lower is better)
Translates to: APTIPYTRLLAM*NSQVSPQYQCV
Trigger: CACACACTGGTACTGGGGAGAGACCTGTGAATTCAACATCGCCAAGAGCCTCGTGTATGGGATCGTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.6
CDS CAA 72 bp GCCATCACAGCCCCCACGATCCCATACACGAGGCTCTaGGCGATGTTGAATTCACAGGTCTCTCCCCAGTAC +
Preference number: 6 (lower is better)
Translates to: AITAPTIPYTRL*AMLNSQVSPQY
Trigger: GTACTGGGGAGAGACCTGTGAATTCAACATCGCCAAGAGCCTCGTGTATGGGATCGTGGGGGCTGTGATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.6
CDS TCA 72 bp CCCCCACGATCCCATACACGAGGCTCTTGGCGATGTTaGATTCACAGGTCTCTCCCCAGTACCAGTGTGTGT +
Preference number: 6 (lower is better)
Translates to: PPRSHTRGSWRC*IHRSLPSTSVC
Trigger: ACACACACTGGTACTGGGGAGAGACCTGTGAATTCAACATCGCCAAGAGCCTCGTGTATGGGATCGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.6
CDS GCA 72 bp ATCCAGCAGATGCCCCCTCATCTTTCAGGGCATTCCTaGACCGTAGCTCCCCTGCAGACCTGTGGAAATGAT +
Preference number: 6 (lower is better)
Translates to: IQQMPPHLSGHS*TVAPLQTCGND
Trigger: ATCATTTCCACAGGTCTGCAGGGGAGCTACGGTGCAGGAATGCCCTGAAAGATGAGGGGGCATCTGCTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS GCA 72 bp CCCAGGTTCTTCACTCGTGCTCCTGTCATCCACAAATaGACCAGCACCACCACACTCTCCCCAGCAAACATC +
Preference number: 6 (lower is better)
Translates to: PRFFTRAPVIHK*TSTTTLSPANI
Trigger: GATGTTTGCTGGGGAGAGTGTGGTGGTGCTGGTGCATTTGTGGATGACAGGAGCACGAGTGAAGAACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS GCA 72 bp CTTCCCAGATGGCCGTCTTCTGGAAGATGCCAGGGGTaGCTTCCTTTCGCCACTCTTGAGGCACATCATACT +
Preference number: 6 (lower is better)
Translates to: LPRWPSSGRCQG*LPFATLEAHHT
Trigger: AGTATGATGTGCCTCAAGAGTGGCGAAAGGAAGGCACCCCTGGCATCTTCCAGAAGACGGCCATCTGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS CAA 90 bp GGGGCCACTGCGTTGCAGCTGACATGTGCCCAGGTTACAGTTCATTaGCGACTTCGTTCCTTTGGTGCACTTGTTCACACAGGCCAGCTT +
Preference number: 6 (lower is better)
Translates to: GATALQLTCAQVTVH*RLRSFGALVHTGQL
Trigger: AAGCTGGCCTGTGTGAACAAGTGCACCAAAGGAACGAAGTCGCAAATGAACTGTAACCTGGGCACATGTCAGCTGCAACGCAGTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS TCA 72 bp CCAGTCCACAATGTGCCCTGCTGGGAAATGGCTTTGTaGACAGCAGAGCCCTCTGGTGTCACTGTAGTAACG +
Preference number: 6 (lower is better)
Translates to: PVHNVPCWEMAL*TAEPSGVTVVT
Trigger: CGTTACTACAGTGACACCAGAGGGCTCTGCTGTTCACAAAGCCATTTCCCAGCAGGGCACATTGTGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS TCA 72 bp TGGAAGATGCCAGGGGTGCCTTCCTTTCGCCACTCTTaGGGCACATCATACTGTTCCCTGTGCCGTTTTCTC +
Preference number: 6 (lower is better)
Translates to: WKMPGVPSFRHS*GTSYCSLCRFL
Trigger: GAGAAAACGGCACAGGGAACAGTATGATGTGCCTCAAGAGTGGCGAAAGGAAGGCACCCCTGGCATCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS GCA 72 bp TGCCTTCTCAGAGTGCTCTTCCCTTGCTCGACTGTCTaGTTCTCCAAAACCTCACCAGTCCACAATGTGCCC +
Preference number: 6 (lower is better)
Translates to: CLLRVLFPCSTV*FSKTSPVHNVP
Trigger: GGGCACATTGTGGACTGGTGAGGTTTTGGAGAAGCAGACAGTCGAGCAAGGGAAGAGCACTCTGAGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379442.7
CDS CAA 72 bp CTGGAAGATGCCAGGGGTGCCTTCCTTTCGCCACTCTaGAGGCACATCATACTGTTCCCTGTGCCGTTTTCT +
Preference number: 6 (lower is better)
Translates to: LEDARGAFLSPL*RHIILFPVPFS
Trigger: AGAAAACGGCACAGGGAACAGTATGATGTGCCTCAAGAGTGGCGAAAGGAAGGCACCCCTGGCATCTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS CAA 90 bp GCCATCACAGCCCCCACGATCCCATACACGAGGCTCTTGGCGATGTaGAATTCACAGGTCTCTCCCCAGTACCAGTGTGTGTTCGTATTT +
Preference number: 6 (lower is better)
Translates to: AITAPTIPYTRLLAM*NSQVSPQYQCVFVF
Trigger: AAATACGAACACACACTGGTACTGGGGAGAGACCTGTGAATTCAACATCGCCAAGAGCCTCGTGTATGGGATCGTGGGGGCTGTGATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305119.3
ENST00000379442.7
ENST00000536621.6
CDS GCA 72 bp GCCGGAAGTTGTTGTAGGCGTTCTCAAGGCCGAATCTaGTCTCCCTCAGATTCTGGTCTCTATTCCAGTACG +
Preference number: 6 (lower is better)
Translates to: AGSCCRRSQGRI*SPSDSGLYSST
Trigger: CGTACTGGAATAGAGACCAGAATCTGAGGGAGAGCAGATTCGGCCTTGAGAACGCCTACAACAACTTCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473098.5
CDS CAA 72 bp GTGCCCAGGTTACAGTTCATTTGCGACTTCGTTCCTTaGGTGCACTTGTTCACACAGGCCAGCTTCCCATCC +
Preference number: 6 (lower is better)
Translates to: VPRLQFICDFVP*VHLFTQASFPS
Trigger: GGATGGGAAGCTGGCCTGTGTGAACAAGTGCACCAAAGGAACGAAGTCGCAAATGAACTGTAACCTGGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS TCA 72 bp GCATTGCTCCTGGAAGTCAAAGCCCGGAGTCACCGATaGATCCACGAAAGTGTCCTCTTCACTATAGCACAG +
Preference number: 6 (lower is better)
Translates to: ALLLEVKARSHR*IHESVLFTIAQ
Trigger: CTGTGCTATAGTGAAGAGGACACTTTCGTGGATTCATCGGTGACTCCGGGCTTTGACTTCCAGGAGCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS CCA 72 bp TGCCCAGGTTACAGTTCATTTGCGACTTCGTTCCTTTaGTGCACTTGTTCACACAGGCCAGCTTCCCATCCA +
Preference number: 6 (lower is better)
Translates to: CPGYSSFATSFL*CTCSHRPASHP
Trigger: TGGATGGGAAGCTGGCCTGTGTGAACAAGTGCACCAAAGGAACGAAGTCGCAAATGAACTGTAACCTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS TCA 72 bp CCGTTGAGCAATCTCCGAATGTTCACCCCTCTATACTaGGGAAGATTGTCGCCCTTCAAAACGACATCCATC +
Preference number: 6 (lower is better)
Translates to: PLSNLRMFTPLY*GRLSPFKTTSI
Trigger: GATGGATGTCGTTTTGAAGGGCGACAATCTTCCTCAGTATAGAGGGGTGAACATTCGGAGATTGCTCAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS CAA 72 bp GCACTGGTAACCAACGTAGCCTTGGGGACAGACGCATaGTTTTCCATTCCAAATTTGTCCTTCCTGGCACAA +
Preference number: 6 (lower is better)
Translates to: ALVTNVALGTDA*FSIPNLSFLAQ
Trigger: TTGTGCCAGGAAGGACAAATTTGGAATGGAAAACAATGCGTCTGTCCCCAAGGCTACGTTGGTTACCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS CAA 72 bp TTACAGTTCATTTGCGACTTCGTTCCTTTGGTGCACTaGTTCACACAGGCCAGCTTCCCATCCAAGACATCC +
Preference number: 6 (lower is better)
Translates to: LQFICDFVPLVH*FTQASFPSKTS
Trigger: GGATGTCTTGGATGGGAAGCTGGCCTGTGTGAACAAGTGCACCAAAGGAACGAAGTCGCAAATGAACTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS TCA 72 bp TGTAAGTCACTTTCACTGTCATACCTAAAGTGGCGTTaGGTTTTTCCGGGGTTTCTACAGGGAAGGATTCCA +
Preference number: 6 (lower is better)
Translates to: CKSLSLSYLKWR*VFPGFLQGRIP
Trigger: TGGAATCCTTCCCTGTAGAAACCCCGGAAAAACTCAACGCCACTTTAGGTATGACAGTGAAAGTGACTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6
CDS CAA 90 bp CAGGAATCAGGATCAAGAAGAGTTGTTCTAGTTTCATTCATAATCTaGGCCTTTACAATCTCTGCCAGGTTTTCAAACAGTTCCTCATAC +
Preference number: 6 (lower is better)
Translates to: QESGSRRVVLVSFII*AFTISARFSNSSSY
Trigger: GTATGAGGAACTGTTTGAAAACCTGGCAGAGATTGTAAAGGCCAAGATTATGAATGAAACTAGAACAACTCTTCTTGATCCTGATTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379442.7
ENST00000536621.6