RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTSS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000170873

Ensembl transcript IDs: ENST00000325064.9, ENST00000378017.7, ENST00000431961.6, ENST00000472084.2, ENST00000518547.6, ENST00000519168.5, ENST00000519226.1, ENST00000519671.1, ENST00000520094.1, ENST00000520771.1, ENST00000522118.1, ENST00000522162.1, ENST00000522722.1, ENST00000523179.5, ENST00000523587.5, ENST00000524090.5, ENST00000524243.5, ENST00000529463.5

Found 649 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCATGCATGGGGCTaGTTGTGGGTGCTGTGTGCAGTCCAGAGGAATCATGGGAGAAAG +
Preference number: 1 (lower is better)
Translates to: VGDSTTAQRQQHAWG*LWVLCAVQRNHGRK
Trigger: CTTTCTCCCATGATTCCTCTGGACTGCACACAGCACCCACAACCAGCCCCATGCATGCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR CCA 90 bp ACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCATGCATaGGGCTGGTTGTGGGTGCTGTGTGCAGTCCAGAGGAATCATGGG +
Preference number: 1 (lower is better)
Translates to: TEVGDSTTAQRQQHA*GWLWVLCAVQRNHG
Trigger: CCCATGATTCCTCTGGACTGCACACAGCACCCACAACCAGCCCCATGCATGCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR GCA 90 bp TGCCCAGAGGCAGCAGCATGCATGGGGCTGGTTGTGGGTGCTGTGTaGAGTCCAGAGGAATCATGGGAGAAAGGAAGTCAAGTCCTTAAA +
Preference number: 1 (lower is better)
Translates to: CPEAAACMGLVVGAV*SPEESWEKGSQVLK
Trigger: TTTAAGGACTTGACTTCCTTTCTCCCATGATTCCTCTGGACTGCACACAGCACCCACAACCAGCCCCATGCATGCTGCTGCCTCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR CCA 90 bp TATTTGGATTCCATAAAGGTGAGTACAATCAACGAGAAACTGAAGTaGGAGATTCTACGACTGCCCAGAGGCAGCAGCATGCATGGGGCT +
Preference number: 1 (lower is better)
Translates to: YLDSIKVSTINEKLK*EILRLPRGSSMHGA
Trigger: AGCCCCATGCATGCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGTACTCACCTTTATGGAATCCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR GCA 90 bp CACCCTACAGAAACAAACACTGCAATCCAGTATGGCTTATTCGGATaGATTTACCATGAAGCTACCAGAAGAAATTCAACCTACGAGGCT +
Preference number: 1 (lower is better)
Translates to: HPTETNTAIQYGLFG*IYHEATRRNSTYEA
Trigger: AGCCTCGTAGGTTGAATTTCTTCTGGTAGCTTCATGGTAAATGCATCCGAATAAGCCATACTGGATTGCAGTGTTTGTTTCTGTAGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR TCA 90 bp CCCCCAATCCCAACACAGTCTACCATTTCCAGATTTACTTCACTCTaGATATTGCTCATCAATTGTTACTCCTGCTCTTTTCATCCAGAA +
Preference number: 1 (lower is better)
Translates to: PPIPTQSTISRFTSL*ILLINCYSCSFHPE
Trigger: TTCTGGATGAAAAGAGCAGGAGTAACAATTGATGAGCAATATTCAGAGTGAAGTAAATCTGGAAATGGTAGACTGTGTTGGGATTGGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR CCA 90 bp CATCATATGCACAATGCATCAGCTACTTTTAGTCATCAAGATTGGTaGGCTAAACCACAGGCACTACTGTTGTTTATATTCTGTAAAAGG +
Preference number: 1 (lower is better)
Translates to: HHMHNASATFSHQDW*AKPQALLLFIFCKR
Trigger: CCTTTTACAGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGCATTGTGCATATGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR GCA 90 bp TCCCAACACAGTCTACCATTTCCAGATTTACTTCACTCTGAATATTaGTCATCAATTGTTACTCCTGCTCTTTTCATCCAGAACATAGTA +
Preference number: 1 (lower is better)
Translates to: SQHSLPFPDLLHSEY*SSIVTPALFIQNIV
Trigger: TACTATGTTCTGGATGAAAAGAGCAGGAGTAACAATTGATGAGCAATATTCAGAGTGAAGTAAATCTGGAAATGGTAGACTGTGTTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR CCA 90 bp AAGCATCATATGCACAATGCATCAGCTACTTTTAGTCATCAAGATTaGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTGTAAA +
Preference number: 1 (lower is better)
Translates to: KHHMHNASATFSHQD*WAKPQALLLFIFCK
Trigger: TTTACAGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGCATTGTGCATATGATGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR GCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGGTTGTGGGTGCTGTGTaGAGTCCAGAGGAATCATGG +
Preference number: 2 (lower is better)
Translates to: ASATFSHQDWWAKPQALLVVGAV*SPEESW
Trigger: CCATGATTCCTCTGGACTGCACACAGCACCCACAAC...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR GCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGGGGCTGGTTGTGGGTaGTGTGTGCAGTCCAGAGGA +
Preference number: 2 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAGAGCG*CVQSRG
Trigger: TCCTCTGGACTGCACACAGCACCCACAACCAGCCCC...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR CCA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGAGGCAGCAGCATGCATaGGGCTGGTTGTGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWRQQHA*GWLWVL
Trigger: CAGCACCCACAACCAGCCCCATGCATGCTGCTGCCT...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR CCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCGCATGGGGCTGGTTGTaGGTGCTGTGTGCAGTCCAG +
Preference number: 2 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFAWGWL*VLCAVQ
Trigger: CTGGACTGCACACAGCACCCACAACCAGCCCCATGC...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR CCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGAGGCAGCAGCATGCATaGGGCTGGTTGTGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMRQQHA*GWLWVL
Trigger: CAGCACCCACAACCAGCCCCATGCATGCTGCTGCCT...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR GCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACACTTCGTGGTTCCCCTaGCCCAACCCCCTTTATGCA +
Preference number: 2 (lower is better)
Translates to: TALPFWMYLDSIKVSTINTSWFP*PNPLYA
Trigger: TGCATAAAGGGGGTTGGGGCAGGGGAACCACGAAGT...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR GCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCGGGAGATTCTACGACTaGCCAGAGGCAGCAGCATGC +
Preference number: 2 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFGRFYD*PEAAAC
Trigger: GCATGCTGCTGCCTCTGGGCAGTCGTAGAATCTCCC...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR CCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAACGCACCCAGCCTGCTaGGCACAGTTAAGTAAAAGG +
Preference number: 2 (lower is better)
Translates to: SNVIPLNLQISVGFRGWATHPAC*AQLSKR
Trigger: CCTTTTACTTAACTGTGCCCAGCAGGCTGGGTGCGT...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR GCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCACTTCGTGGTTCCCCTaGCCCAACCCCCTTTATGCA +
Preference number: 2 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFTSWFP*PNPLYA
Trigger: TGCATAAAGGGGGTTGGGGCAGGGGAACCACGAAGT...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR TCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGACTCCTCCTCTGCCTTaGGAGGGTTCGGTCAGAAAT +
Preference number: 2 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMTPPLP*EGSVRN
Trigger: ATTTCTGACCGAACCCTCTCAAGGCAGAGGAGGAGT...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR CCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGAACGAGAAACTGAAGTaGGAGATTCTACGACTGCCC +
Preference number: 2 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMNEKLK*EILRLP
Trigger: GGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTT...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR TCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGCAATCAACGAGAAACTaGAGTGGGAGATTCTACGAC +
Preference number: 2 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMQSTRN*SGRFYD
Trigger: GTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTG...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR GCA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCTAGACTACTACAATaGATCTACAAAAGCTTGTGG +
Preference number: 2 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWARLLQ*IYKSLW
Trigger: CCACAAGCTTTTGTAGATGCATTGTAGTAGTCTAGC...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR GCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGTATGGCTTATTCGGATaGATTTACCATGAAGCTACC +
Preference number: 2 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRYGLFG*IYHEAT
Trigger: GGTAGCTTCATGGTAAATGCATCCGAATAAGCCATA...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR GCA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTTATGGCTTATTCGGATaGATTTACCATGAAGCTACC +
Preference number: 2 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSYGLFG*IYHEAT
Trigger: GGTAGCTTCATGGTAAATGCATCCGAATAAGCCATA...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR CCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTCACTGCAATCCAGTATaGCTTATTCGGATGCATTTA +
Preference number: 2 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCHCNPV*LIRMHL
Trigger: TAAATGCATCCGAATAAGCCATACTGGATTGCAGTG...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR TCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTCACTTTTATCTATTGTaGTTACCTTGCAGCGATTTC +
Preference number: 2 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCHFYLL*LPCSDF
Trigger: GAAATCGCTGCAAGGTAATCACAATAGATAAAAGTG...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR GCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCGCTAGACTACTACAATaGATCTACAAAAGCTTGTGG +
Preference number: 2 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFARLLQ*IYKSLW
Trigger: CCACAAGCTTTTGTAGATGCATTGTAGTAGTCTAGC...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR GCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCACTTCACTCTGAATATTaGTCATCAATTGTTACTCCT +
Preference number: 2 (lower is better)
Translates to: SNVIPLNLQISVGFRGWALHSEY*SSIVTP
Trigger: AGGAGTAACAATTGATGAGCAATATTCAGAGTGAAG...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR GCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTATCTCAAGCATCATATaGACAATGCATCAGCTACTT +
Preference number: 2 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCISSII*TMHQLL
Trigger: AAGTAGCTGATGCATTGTGCATATGATGCTTGAGAT...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR GCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGTACAGAAACAAACACTaGAATCCAGTATGGCTTATT +
Preference number: 2 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRYRNKH*NPVWLI
Trigger: AATAAGCCATACTGGATTGCAGTGTTTGTTTCTGTA...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR GCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCTACAGAAACAAACACTaGAATCCAGTATGGCTTATT +
Preference number: 2 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFYRNKH*NPVWLI
Trigger: AATAAGCCATACTGGATTGCAGTGTTTGTTTCTGTA...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR GCA 72 bp CCCAGAGGCAGCAGCATGCATGGGGCTGGTTGTGGGTaGTGTGTGCAGTCCAGAGGAATCATGGGAGAAAGG +
Preference number: 3 (lower is better)
Translates to: PRGSSMHGAGCG*CVQSRGIMGER
Trigger: CCTTTCTCCCATGATTCCTCTGGACTGCACACAGCACCCACAACCAGCCCCATGCATGCTGCTGCCTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR GCA 72 bp TCTGCAGGGTGTATGAAACCCACCAAACTCCTCCTCTaGCTTGAGAGGGTTCGGTCAGAAATGTGCCCTGTT +
Preference number: 3 (lower is better)
Translates to: SAGCMKPTKLLL*LERVRSEMCPV
Trigger: AACAGGGCACATTTCTGACCGAACCCTCTCAAGGCAGAGGAGGAGTTTGGTGGGTTTCATACACCCTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR CAA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCACAGGATCGGCTATGTaGACGATGTACCCCTCCCAT +
Preference number: 3 (lower is better)
Translates to: TINEKLKWEILRLPRGSSTGSAM*TMYPSH
Trigger: ATGGGAGGGGTACATCGTCAACATAGCCGATCCTGT...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR CCA 72 bp TCCATAAAGGTGAGTACAATCAACGAGAAACTGAAGTaGGAGATTCTACGACTGCCCAGAGGCAGCAGCATG +
Preference number: 3 (lower is better)
Translates to: SIKVSTINEKLK*EILRLPRGSSM
Trigger: CATGCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGTACTCACCTTTATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR CAA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTCATGCATGGGGCTGGTaGTGGGTGCTGTGTGCAGTC +
Preference number: 3 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCHAWGW*WVLCAV
Trigger: GACTGCACACAGCACCCACAACCAGCCCCATGCATG...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR TCA 72 bp TGCAATCCAGTATGGCTTATTCGGATGCATTTACCATaGAGCTACCAGAAGAAATTCAACCTACGAGGCTAC +
Preference number: 3 (lower is better)
Translates to: CNPVWLIRMHLP*SYQKKFNLRGY
Trigger: GTAGCCTCGTAGGTTGAATTTCTTCTGGTAGCTTCATGGTAAATGCATCCGAATAAGCCATACTGGATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR CAA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCCCAAGCTGGCTACCCTaGTCAAATCTGTTCGAGTTT +
Preference number: 3 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFPSWLP*SNLFEF
Trigger: AAACTCGAACAGATTTGACAAGGGTAGCCAGCTTGG...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR CAA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGAAACACATTGGCAAGTaGCTAGACTCCAAGCTGGCT +
Preference number: 3 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMKHIGK*LDSKLA
Trigger: AGCCAGCTTGGAGTCTAGCAACTTGCCAATGTGTTT...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR CAA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGAAACAAGCCCCCAGATaGGTAAACACATTGGCAAGT +
Preference number: 3 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWKQAPR*VNTLAS
Trigger: ACTTGCCAATGTGTTTACCAATCTGGGGGCTTGTTT...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR GCA 72 bp GAAACAAACACTGCAATCCAGTATGGCTTATTCGGATaGATTTACCATGAAGCTACCAGAAGAAATTCAACC +
Preference number: 3 (lower is better)
Translates to: ETNTAIQYGLFG*IYHEATRRNST
Trigger: GGTTGAATTTCTTCTGGTAGCTTCATGGTAAATGCATCCGAATAAGCCATACTGGATTGCAGTGTTTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR CCA 72 bp CACAATGCATCAGCTACTTTTAGTCATCAAGATTGGTaGGCTAAACCACAGGCACTACTGTTGTTTATATTC +
Preference number: 3 (lower is better)
Translates to: HNASATFSHQDW*AKPQALLLFIF
Trigger: GAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGCATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR CCA 72 bp ATGCACAATGCATCAGCTACTTTTAGTCATCAAGATTaGTGGGCTAAACCACAGGCACTACTGTTGTTTATA +
Preference number: 3 (lower is better)
Translates to: MHNASATFSHQD*WAKPQALLLFI
Trigger: TATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGCATTGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR CAA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTCCCTTTTGGATGTATTaGGATTCCATAAAGGTGAGT +
Preference number: 3 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCPFWMY*DSIKVS
Trigger: ACTCACCTTTATGGAATCCAAATACATCCAAAAGGG...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR CAA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGCCCTTTTGGATGTATTaGGATTCCATAAAGGTGAGT +
Preference number: 3 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRPFWMY*DSIKVS
Trigger: ACTCACCTTTATGGAATCCAAATACATCCAAAAGGG...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR-3UTR CAA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGGAGCTATATTCCGAGTaGCCTACAAAATCTTTTGTT +
Preference number: 3 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRELYSE*PTKSFV
Trigger: AACAAAAGATTTTGTAGGCAACTCGGAATATAGCTC...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCGAAGGTGGACAGAGGTaGCCCGAGGGAGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: TINEKLKWEILRLPRGSSEGGQR*PEGAGG
Trigger: CCCGCCTGCTCCCTCGGGTCACCTCTGTCCACCTTC...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR CCA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCCTCAGCTGCTGCAGGTaGGCCGCTGGCGGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: TINEKLKWEILRLPRGSSLSCCR*AAGGSG
Trigger: CCCACTACCGCCAGCGGCCCACCTGCAGCAGCTGAG...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCGAGAAAATCGCCCGCTaGCCCGGGGCCAGCGCCATT +
Preference number: 4 (lower is better)
Translates to: TINEKLKWEILRLPRGSSEKIAR*PGASAI
Trigger: AATGGCGCTGGCCCCGGGTCAGCGGGCGATTTTCTC...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR CCA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCGCGAGTGGGAGCCGCTaGACCGGGAGTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: TINEKLKWEILRLPRGSSASGSR*TGSHCC
Trigger: ACAGCAGTGACTCCCGGTCCAGCGGCTCCCACTCGC...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGCTGGGGGAATGCGAGTaGGAGCCGCTGGACCGGGAG +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLLGECE*EPLDRE
Trigger: CTCCCGGTCCAGCGGCTCCCACTCGCATTCCCCCAG...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCCCTCACCAGGCCTGGTaGCAGCCGATACAGTCATGC +
Preference number: 4 (lower is better)
Translates to: TINEKLKWEILRLPRGSSPHQAW*QPIQSC
Trigger: GCATGACTGTATCGGCTGCCACCAGGCCTGGTGAGG...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCGAGGAGGGCAGTTTGTaGGGGTCCATGGTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: TINEKLKWEILRLPRGSSEEGSL*GSMVRL
Trigger: AAGCCTGACCATGGACCCTCACAAACTGCCCTCCTC...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGGCGAGTGGGAGCCGCTaGACCGGGAGTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLASGSR*TGSHCC
Trigger: ACAGCAGTGACTCCCGGTCCAGCGGCTCCCACTCGC...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCTCTCCTCACCAGGCCTaGTGGCAGCCGATACAGTCA +
Preference number: 4 (lower is better)
Translates to: TINEKLKWEILRLPRGSSSPHQA*WQPIQS
Trigger: TGACTGTATCGGCTGCCACCAGGCCTGGTGAGGAGA...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGCCCATCTGGAGGGGCTaGCAACACCCCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLPIWRG*QHPWEV
Trigger: GACCTCCCAGGGGTGTTGCCAGCCCCTCCAGATGGG...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCTTCCAGCTAGGGATCTaGGATGACGGGAACATGCCG +
Preference number: 4 (lower is better)
Translates to: TINEKLKWEILRLPRGSSFQLGI*DDGNMP
Trigger: CGGCATGTTCCCGTCATCTCAGATCCCTAGCTGGAA...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR TCA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCAGAAAAGCGAGGGGCTaGGCGATCGTTTGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: TINEKLKWEILRLPRGSSRKARG*AIVCRG
Trigger: ACCACGACAAACGATCGCTCAGCCCCTCGCTTTTCT...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCCCTTGGGCTCAGGTCTaGAGGGTCACTCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: TINEKLKWEILRLPRGSSPWAQV*RVTLWN
Trigger: ATTCCAGAGAGTGACCCTGCAGACCTGAGCCCAAGG...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCACTTCGTGGTTCCCCTaGCCCAACCCCCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: TINEKLKWEILRLPRGSSTSWFP*PNPLYA
Trigger: TGCATAAAGGGGGTTGGGGCAGGGGAACCACGAAGT...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCACCTCCTTTTCACTCCTaGGCGCCCGGCCCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAPPFHS*APGPGA
Trigger: AGCGCCGGGGCCGGGCGCGCAGGAGTGAAAAGGAGG...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR CCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGGGCGGACAGAAGGCTTaGTGGAAGGGGTCCGTCGGA +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLGGQKA*WKGSVG
Trigger: TCCGACGGACCCCTTCCACCAAGCCTTCTGTCCGCC...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGAGGCAGCAGCATGCATaGGGCTGGTTGTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLRQQHA*GWLWVL
Trigger: CAGCACCCACAACCAGCCCCATGCATGCTGCTGCCT...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTTGGTGGAGCCCGAGCTaGCAGAGGTGGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSWWSPS*QRWGSC
Trigger: GCAGCTCCCCCACCTCTGTCAGCTCGGGCTCCACCA...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378017.7
CDS-3UTR GCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTCTCTGGGTGTCCAGCTaGAGGCCCCGAGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCLWVSS*RPRDRA
Trigger: GGCCCTGTCTCGGGGCCTGCAGCTGGACACCCAGAG...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCGGCGTCCGGATCTGTTaGTCGCAGCTGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFGVRIC*SQLRPP
Trigger: CGGCGGCCGCAGCTGCGAGCAACAGATCCGGACGCC...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR CCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCACAGGTCCCAGGGTGGTaGGGAGGCCAGCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAQVPGW*GGQQLR
Trigger: CCTCAACTGCTGGCCTCCCCACCACCCTGGGACCTG...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGAAGGTGGACAGAGGTaGCCCGAGGGAGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAEGGQR*PEGAGG
Trigger: CCCGCCTGCTCCCTCGGGTCACCTCTGTCCACCTTC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGGGGAGGCCAGCAGTTaGGGCTGGACGCTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWGEASS*GWTLGL
Trigger: CAAGCCAAGCGTCCAGCCTCAACTGCTGGCCTCCCC...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTGGGGAGGCCAGCAGTTaGGGCTGGACGCTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCGEASS*GWTLGL
Trigger: CAAGCCAAGCGTCCAGCCTCAACTGCTGGCCTCCCC...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATTGGTGGAGCCCGAGCTaGCAGAGGTGGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNWWSPS*QRWGSC
Trigger: GCAGCTCCCCCACCTCTGTCAGCTCGGGCTCCACCA...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000519168.5
CDS-3UTR GCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGCAGCGAGGACGGGGTaGACCAGACCGACTGTTCTC +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAAARTG*TRPTVL
Trigger: GAGAACAGTCGGTCTGGTGCACCCCGTCCTCGCTGC...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR GCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCCTCTGGGTGTCCAGCTaGAGGCCCCGAGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVALWVSS*RPRDRA
Trigger: GGCCCTGTCTCGGGGCCTGCAGCTGGACACCCAGAG...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCCTCTGGGTGTCCAGCTaGAGGCCCCGAGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFLWVSS*RPRDRA
Trigger: GGCCCTGTCTCGGGGCCTGCAGCTGGACACCCAGAG...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTCTCTGGGTGTCCAGCTaGAGGCCCCGAGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFLWVSS*RPRDRA
Trigger: GGCCCTGTCTCGGGGCCTGCAGCTGGACACCCAGAG...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGGGTCCGTCGGATAGTTaGAACCCCTGGAGTGACCAT +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLGPSDS*NPWSDH
Trigger: ATGGTCACTCCAGGGGTTGCAACTATCCGACGGACC...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGGGAATTGCCTGTCTGTaGTCCTCAGGGATACTGGGC +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLGIACL*SSGILG
Trigger: GCCCAGTATCCCTGAGGAGCACAGACAGGCAATTCC...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCATCTGTTGCTCGCAGCTaGGGCCGCCGCCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWASVARS*GRRLLF
Trigger: GAAAAGGAGGCGGCGGCCGCAGCTGCGAGCAACAGA...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR CCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGCAGATCCAATCTCCCTaGTCCCACCACGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLQIQSP*SHHVCW
Trigger: CCAACACACGTGGTGGGACCAGGGAGATTGGATCTG...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGAGACACTGGACTTTCTaGACATGGTGGTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLRHWTF*TWWCWG
Trigger: CCCCCAGCACCACCATGTCCAGAAAGTCCAGTGTCT...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCCTGGGGGAATGCGAGTaGGAGCCGCTGGACCGGGAG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVALGECE*EPLDRE
Trigger: CTCCCGGTCCAGCGGCTCCCACTCGCATTCCCCCAG...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCTGGGGGAATGCGAGTaGGAGCCGCTGGACCGGGAG +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLLGECE*EPLDRE
Trigger: CTCCCGGTCCAGCGGCTCCCACTCGCATTCCCCCAG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCACATGCCGGGCCCAATaGTGTAATAATGAGCGTAGT +
Preference number: 4 (lower is better)
Translates to: TINEKLKWEILRLPRGSSTCRAQ*CNNERS
Trigger: ACTACGCTCATTATTACACCATTGGGCCCGGCATGT...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCTCAGCTGCTGCAGGTaGGCCGCTGGCGGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLLSCCR*AAGGSG
Trigger: CCCACTACCGCCAGCGGCCCACCTGCAGCAGCTGAG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAACTCAGCTGCTGCAGGTaGGCCGCTGGCGGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQLSCCR*AAGGSG
Trigger: CCCACTACCGCCAGCGGCCCACCTGCAGCAGCTGAG...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCCTCAGCTGCTGCAGGTaGGCCGCTGGCGGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVALSCCR*AAGGSG
Trigger: CCCACTACCGCCAGCGGCCCACCTGCAGCAGCTGAG...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGCAGGTCCCAGGGTGGTaGGGAGGCCAGCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRQVPGW*GGQQLR
Trigger: CCTCAACTGCTGGCCTCCCCACCACCCTGGGACCTG...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGGCGGACAGAAGGCTTaGTGGAAGGGGTCCGTCGGA +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAGGQKA*WKGSVG
Trigger: TCCGACGGACCCCTTCCACCAAGCCTTCTGTCCGCC...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTCCCATCTGGAGGGGCTaGCAACACCCCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCPIWRG*QHPWEV
Trigger: GACCTCCCAGGGGTGTTGCCAGCCCCTCCAGATGGG...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTGAGGCAGGCAGGCAATaGGGGAAAAGGCCTGCACCC +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCEAGRQ*GKRPAP
Trigger: GGGTGCAGGCCTTTTCCCTCATTGCCTGCCTGCCTC...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR TCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGGGGAGGCCAGCAGTTaGGGCTGGACGCTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLGEASS*GWTLGL
Trigger: CAAGCCAAGCGTCCAGCCTCAACTGCTGGCCTCCCC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGGGGAGGCCAGCAGTTaGGGCTGGACGCTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNGEASS*GWTLGL
Trigger: CAAGCCAAGCGTCCAGCCTCAACTGCTGGCCTCCCC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGCACTGTTCAGGCTGCTaGAGACACTGGACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLHCSGC*RHWTFW
Trigger: CCAGAAAGTCCAGTGTCTGCAGCAGCCTGAACAGTG...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTGAAGCGAGTCCCGGCTaGTCCTCTGGGTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSEASPG*SSGCPA
Trigger: AGCTGGACACCCAGAGGAGCAGCCGGGACTCGCTTC...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCATCGCTGATGATGGTCTaGAAGAGGCCTCCGAGCGCG +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWASLMMV*KRPPSA
Trigger: CGCGCTCGGAGGCCTCTTCCAGACCATCATCAGCGA...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGACTGTTGTCCGAAGCTaGGACTGCAGCTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLTVVRS*DCSFPA
Trigger: AGCAGGAAAGCTGCAGTCCCAGCTTCGGACAACAGT...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGCGAGTGGGAGCCGCTaGACCGGGAGTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQASGSR*TGSHCC
Trigger: ACAGCAGTGACTCCCGGTCCAGCGGCTCCCACTCGC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGCGAGTGGGAGCCGCTaGACCGGGAGTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFASGSR*TGSHCC
Trigger: ACAGCAGTGACTCCCGGTCCAGCGGCTCCCACTCGC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCTCACAGGAGCCTGCTaGGCCAGGTTGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLLTGAC*ARLELR
Trigger: CCGCAGCTCCAACCTGGCCCAGCAGGCTCCTGTGAG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCCTCACAGGAGCCTGCTaGGCCAGGTTGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVALTGAC*ARLELR
Trigger: CCGCAGCTCCAACCTGGCCCAGCAGGCTCCTGTGAG...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTCTCACAGGAGCCTGCTaGGCCAGGTTGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFLTGAC*ARLELR
Trigger: CCGCAGCTCCAACCTGGCCCAGCAGGCTCCTGTGAG...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGGGCCTCTGGCGGCATaGGGGATGGTGACTTGGACT +
Preference number: 4 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWGPLAA*GMVTWT
Trigger: AGTCCAAGTCACCATCCCCCATGCCGCCAGAGGCCC...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTAAAGGCCTGCACCCGTaGGCCCCACGTGGGACTCAC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFKGLHP*APRGTH
Trigger: GTGAGTCCCACGTGGGGCCCACGGGTGCAGGCCTTT...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAAAGGCCTGCACCCGTaGGCCCCACGTGGGACTCAC +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQKGLHP*APRGTH
Trigger: GTGAGTCCCACGTGGGGCCCACGGGTGCAGGCCTTT...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTTGGGTCCTCCCCCGTTaGGGTCCGGTTCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCWVLPR*GPVLAS
Trigger: AGAAGCGAGAACCGGACCCCAACGGGGGAGGACCCA...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTTGGGTCCTCCCCCGTTaGGGTCCGGTTCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSWVLPR*GPVLAS
Trigger: AGAAGCGAGAACCGGACCCCAACGGGGGAGGACCCA...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCAGGTCCCAGGGTGGTaGGGAGGCCAGCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNQVPGW*GGQQLR
Trigger: CCTCAACTGCTGGCCTCCCCACCACCCTGGGACCTG...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCCAGGTCCCAGGGTGGTaGGGAGGCCAGCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAQVPGW*GGQQLR
Trigger: CCTCAACTGCTGGCCTCCCCACCACCCTGGGACCTG...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGGCTGGCAACACCCCTaGGAGGTCTGGGACGGTTGG +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFGWQHP*EVWDGW
Trigger: CCAACCGTCCCAGACCTCCCAGGGGTGTTGCCAGCC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCGGCTGGCAACACCCCTaGGAGGTCTGGGACGGTTGG +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFGWQHP*EVWDGW
Trigger: CCAACCGTCCCAGACCTCCCAGGGGTGTTGCCAGCC...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGGCTGGCAACACCCCTaGGAGGTCTGGGACGGTTGG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAGWQHP*EVWDGW
Trigger: CCAACCGTCCCAGACCTCCCAGGGGTGTTGCCAGCC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAACCCATCTGGAGGGGCTaGCAACACCCCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQPIWRG*QHPWEV
Trigger: GACCTCCCAGGGGTGTTGCCAGCCCCTCCAGATGGG...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGGGCCTGGGGAGACAGTaGCACTTGGGGGTTCCCGTT +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRGLGRQ*HLGVPV
Trigger: AACGGGAACCCCCAAGTGCCACTGTCTCCCCAGGCC...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACTGGACGAGTTCTGGTTaGGGGCCTCTGGCGGCATGG +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINWTSSG*GPLAAW
Trigger: CCATGCCGCCAGAGGCCCCCAACCAGAACTCGTCCA...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378017.7
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGAGCTGGACGAGTTCTaGTTGGGGGCCTCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAELDEF*LGASGG
Trigger: GCCGCCAGAGGCCCCCAACCAGAACTCGTCCAGCTC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000519168.5
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGAGCTGGACGAGTTCTaGTTGGGGGCCTCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQELDEF*LGASGG
Trigger: GCCGCCAGAGGCCCCCAACCAGAACTCGTCCAGCTC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000519168.5
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCGGAGGAGGCCGAGCTaGACGAGTTCTGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLRRRPS*TSSGWG
Trigger: CCCCCAACCAGAACTCGTCCAGCTCGGCCTCCTCCG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000519168.5
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAACGGAGGAGGCCGAGCTaGACGAGTTCTGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQRRRPS*TSSGWG
Trigger: CCCCCAACCAGAACTCGTCCAGCTCGGCCTCCTCCG...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000519168.5
CDS-3UTR TCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGGGAGTCACTGCTGTTaGCACTGTTCAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAGSHCC*HCSGCC
Trigger: GCAGCAGCCTGAACAGTGTCAACAGCAGTGACTCCC...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACGCGGTAGCGGTAATGTaGGCTGGGGGAATGCGAGTG +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINAVAVM*AGGMRV
Trigger: CACTCGCATTCCCCCAGCTCACATTACCGCTACCGC...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGCGGCATGGGGGATGGTaGCTTGGACTGGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRRHGGW*LGLEGI
Trigger: GATGCCTTCCAGTCCAAGTCACCATCCCCCATGCCG...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGAGGCAGGCAGGCAATaGGGGAAAAGGCCTGCACCC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAEAGRQ*GKRPAP
Trigger: GGGTGCAGGCCTTTTCCCTCATTGCCTGCCTGCCTC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGAGGCAGGCAGGCAATaGGGGAAAAGGCCTGCACCC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLEAGRQ*GKRPAP
Trigger: GGGTGCAGGCCTTTTCCCTCATTGCCTGCCTGCCTC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGCTAGGGATCTGAGATaGCGGGAACATGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAARDLR*REHAGP
Trigger: GGGCCCGGCATGTTCCCGTCATCTCAGATCCCTAGC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCGCTAGGGATCTGAGATaGCGGGAACATGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFARDLR*REHAGP
Trigger: GGGCCCGGCATGTTCCCGTCATCTCAGATCCCTAGC...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR TCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGCTAGGGATCTGAGATaGCGGGAACATGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFARDLR*REHAGP
Trigger: GGGCCCGGCATGTTCCCGTCATCTCAGATCCCTAGC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGGATCACGGGTGTCTTaGTGGGGATGGGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWGSRVS*WGWDQL
Trigger: GAGCTGGTCCCATCCCCATCAAGACACCCGTGATCC...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGAATCTGCAGGGTGTATaGAACCCACCAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLNLQGV*NPPNSS
Trigger: GGAGGAGTTTGGTGGGTTTCATACACCCTGCAGATT...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGCAGCGAGGACGGGGTaGACCAGACCGACTGTTCTC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFAARTG*TRPTVL
Trigger: GAGAACAGTCGGTCTGGTGCACCCCGTCCTCGCTGC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325064.9
ENST00000518547.6
CDS-3UTR GCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAACTCGCAGCCTCTTCTaGAGCGAGGACGGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQTRSLF*SEDGVH
Trigger: GTGCACCCCGTCCTCGCTGCAGAAGAGGCTGCGAGT...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325064.9
ENST00000518547.6
CDS-3UTR GCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGCAAGAAGGCAGCTGCTaGTACTACTGTTGTCCGAAG +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLQEGSC*YYCCPK
Trigger: CTTCGGACAACAGTAGTAGCAGCAGCTGCCTTCTTG...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTGGGCCAGGTTGGAGCTaGGGTAGCGGTAATGTGAGC +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCGPGWS*GSGNVS
Trigger: GCTCACATTACCGCTACCGCAGCTCCAACCTGGCCC...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTAGCCTCACAGGAGCCTaGTGGGCCAGGTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFSLTGA*WARLEL
Trigger: CAGCTCCAACCTGGCCCAGCAGGCTCCTGTGAGGCT...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGAGCCTCACAGGAGCCTaGTGGGCCAGGTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMSLTGA*WARLEL
Trigger: CAGCTCCAACCTGGCCCAGCAGGCTCCTGTGAGGCT...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCAGCCTCACAGGAGCCTaGTGGGCCAGGTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVASLTGA*WARLEL
Trigger: CAGCTCCAACCTGGCCCAGCAGGCTCCTGTGAGGCT...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTAGCCTCACAGGAGCCTaGTGGGCCAGGTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLSLTGA*WARLEL
Trigger: CAGCTCCAACCTGGCCCAGCAGGCTCCTGTGAGGCT...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCATGAGGGAAAAGGCCTaGACCCGTGGGCCCCACGTG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAMREKA*TRGPHV
Trigger: CACGTGGGGCCCACGGGTGCAGGCCTTTTCCCTCAT...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTATGAGGGAAAAGGCCTaGACCCGTGGGCCCCACGTG +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLMREKA*TRGPHV
Trigger: CACGTGGGGCCCACGGGTGCAGGCCTTTTCCCTCAT...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCATTCTCTTTGCGGCGCTaGAGGGTGTTCACCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAFSLRR*RVFTRG
Trigger: GCCTCTGGTGAACACCCTGCAGCGCCGCAAAGAGAA...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGAAGCGAGTCCCGGCTaGTCCTCTGGGTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAEASPG*SSGCPA
Trigger: AGCTGGACACCCAGAGGAGCAGCCGGGACTCGCTTC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGGAAGCGAGTCCCGGCTaGTCCTCTGGGTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMEASPG*SSGCPA
Trigger: AGCTGGACACCCAGAGGAGCAGCCGGGACTCGCTTC...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGAAGCGAGTCCCGGCTaGTCCTCTGGGTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLEASPG*SSGCPA
Trigger: AGCTGGACACCCAGAGGAGCAGCCGGGACTCGCTTC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGGGGCTGGTTGTGGGTaGTGTGTGCAGTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWGAGCG*CVQSRG
Trigger: TCCTCTGGACTGCACACAGCACCCACAACCAGCCCC...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACGCTGGGGGAAGAGGGTaGCGTCTGATACGACCAGCT +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINAGGRG*RLIRPA
Trigger: AGCTGGTCGTATCAGACGCCACCCTCTTCCCCCAGC...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGGGCCTCTGGCGGCATaGGGGATGGTGACTTGGACT +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLGPLAA*GMVTWT
Trigger: AGTCCAAGTCACCATCCCCCATGCCGCCAGAGGCCC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGGGCCTCTGGCGGCATaGGGGATGGTGACTTGGACT +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQGPLAA*GMVTWT
Trigger: AGTCCAAGTCACCATCCCCCATGCCGCCAGAGGCCC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGGGCCTCTGGCGGCATaGGGGATGGTGACTTGGACT +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAGPLAA*GMVTWT
Trigger: AGTCCAAGTCACCATCCCCCATGCCGCCAGAGGCCC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTAACCCGTTAGACAACTaGTTGGGGGCCTCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCNPLDN*LGASGG
Trigger: GCCGCCAGAGGCCCCCAACCAGTTGTCTAACGGGTT...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTGGGTCCTCCCCCGTTaGGGTCCGGTTCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFWVLPR*GPVLAS
Trigger: AGAAGCGAGAACCGGACCCCAACGGGGGAGGACCCA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATTGGGTCCTCCCCCGTTaGGGTCCGGTTCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNWVLPR*GPVLAS
Trigger: AGAAGCGAGAACCGGACCCCAACGGGGGAGGACCCA...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGCCTCACCAGGCCTGGTaGCAGCCGATACAGTCATGC +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRPHQAW*QPIQSC
Trigger: GCATGACTGTATCGGCTGCCACCAGGCCTGGTGAGG...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGCAGAGCAGCAGGGGGTaGTTGTCTGGGTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRQSSRG*LSGCCS
Trigger: GCTACAGCACCCAGACAACCACCCCCTGCTGCTCTG...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGGCGGACAGAAGGCTTaGTGGAAGGGGTCCGTCGGA +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLGGQKA*WKGSVG
Trigger: TCCGACGGACCCCTTCCACCAAGCCTTCTGTCCGCC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGGCGGACAGAAGGCTTaGTGGAAGGGGTCCGTCGGA +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNGGQKA*WKGSVG
Trigger: TCCGACGGACCCCTTCCACCAAGCCTTCTGTCCGCC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACTGGGACCAGCTCCAATaGTTCCCCGGCGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINWDQLQ*FPGGQK
Trigger: CTTCTGTCCGCCGGGGAACCATTGGAGCTGGTCCCA...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGTGGGACCAGCTCCAATaGTTCCCCGGCGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRWDQLQ*FPGGQK
Trigger: CTTCTGTCCGCCGGGGAACCATTGGAGCTGGTCCCA...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGGAGACAGTGGCACTTaGGGGTTCCCGTTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWGDSGT*GFPFLV
Trigger: GACCAGGAACGGGAACCCCCAAGTGCCACTGTCTCC...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGGCCTGGGGAGACAGTaGCACTTGGGGGTTCCCGTT +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLGLGRQ*HLGVPV
Trigger: AACGGGAACCCCCAAGTGCCACTGTCTCCCCAGGCC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCGGCCTGGGGAGACAGTaGCACTTGGGGGTTCCCGTT +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFGLGRQ*HLGVPV
Trigger: AACGGGAACCCCCAAGTGCCACTGTCTCCCCAGGCC...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGGCCTGGGGAGACAGTaGCACTTGGGGGTTCCCGTT +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNGLGRQ*HLGVPV
Trigger: AACGGGAACCCCCAAGTGCCACTGTCTCCCCAGGCC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAATGGACGAGTTCTGGTTaGGGGCCTCTGGCGGCATGG +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQWTSSG*GPLAAW
Trigger: CCATGCCGCCAGAGGCCCCCAACCAGAACTCGTCCA...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000519168.5
CDS-3UTR CCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGGCATGGGGCTGGTTGTaGGTGCTGTGTGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRAWGWL*VLCAVQ
Trigger: CTGGACTGCACACAGCACCCACAACCAGCCCCATGC...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACAGGCAGCAGCATGCATaGGGCTGGTTGTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINRQQHA*GWLWVL
Trigger: CAGCACCCACAACCAGCCCCATGCATGCTGCTGCCT...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCTCTTCCATCTGTTCTTaGAGTGGGTTTATCAGACAA +
Preference number: 4 (lower is better)
Translates to: TINEKLKWEILRLPRGSSSSICS*SGFIRQ
Trigger: TTGTCTGATAAACCCACTTCAAGAACAGATGGAAGA...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGCGGTAGCGGTAATGTaGGCTGGGGGAATGCGAGTG +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNAVAVM*AGGMRV
Trigger: CACTCGCATTCCCCCAGCTCACATTACCGCTACCGC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGGCGGTAGCGGTAATGTaGGCTGGGGGAATGCGAGTG +
Preference number: 4 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMAVAVM*AGGMRV
Trigger: CACTCGCATTCCCCCAGCTCACATTACCGCTACCGC...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGCGGTAGCGGTAATGTaGGCTGGGGGAATGCGAGTG +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLAVAVM*AGGMRV
Trigger: CACTCGCATTCCCCCAGCTCACATTACCGCTACCGC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAACGGCATGGGGGATGGTaGCTTGGACTGGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQRHGGW*LGLEGI
Trigger: GATGCCTTCCAGTCCAAGTCACCATCCCCCATGCCG...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCCGGCATGGGGGATGGTaGCTTGGACTGGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFRHGGW*LGLEGI
Trigger: GATGCCTTCCAGTCCAAGTCACCATCCCCCATGCCG...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCGGCATGGGGGATGGTaGCTTGGACTGGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLRHGGW*LGLEGI
Trigger: GATGCCTTCCAGTCCAAGTCACCATCCCCCATGCCG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGGATCACGGGTGTCTTaGTGGGGATGGGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLGSRVS*WGWDQL
Trigger: GAGCTGGTCCCATCCCCATCAAGACACCCGTGATCC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATTTGGCCGCTCCACATTaGGGAGGGCATGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNLAAPH*GGHAGD
Trigger: GTCACCAGCATGCCCTCCTCAATGTGGAGCGGCCAA...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTTGGCCGCTCCACATTaGGGAGGGCATGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFLAAPH*GGHAGD
Trigger: GTCACCAGCATGCCCTCCTCAATGTGGAGCGGCCAA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTTGGCCGCTCCACATTaGGGAGGGCATGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVALAAPH*GGHAGD
Trigger: GTCACCAGCATGCCCTCCTCAATGTGGAGCGGCCAA...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAATTGGCCGCTCCACATTaGGGAGGGCATGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQLAAPH*GGHAGD
Trigger: GTCACCAGCATGCCCTCCTCAATGTGGAGCGGCCAA...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGGCCTCCGAGCGCGCTaGATTCCTTCTCAATCACAG +
Preference number: 4 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWGLRAR*IPSQSQ
Trigger: CTGTGATTGAGAAGGAATGCAGCGCGCTCGGAGGCC...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCGGACTGCAGCTTTCCTaGTTTGTTTATGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: TINEKLKWEILRLPRGSSGLQLS*FVYEIF
Trigger: GAAGATTTCATAAACAAAGCAGGAAAGCTGCAGTCC...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGAAAGCGCTCGAAAACTaGCTCAGCTTGGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLKALEN*LSLASM
Trigger: CATTGAAGCCAAGCTGAGGCAGTTTTCGAGCGCTTT...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGGGCCAGGTTGGAGCTaGGGTAGCGGTAATGTGAGC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAGPGWS*GSGNVS
Trigger: GCTCACATTACCGCTACCGCAGCTCCAACCTGGCCC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGGGCCAGGTTGGAGCTaGGGTAGCGGTAATGTGAGC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLGPGWS*GSGNVS
Trigger: GCTCACATTACCGCTACCGCAGCTCCAACCTGGCCC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGGGCCAGGTTGGAGCTaGGGTAGCGGTAATGTGAGC +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNGPGWS*GSGNVS
Trigger: GCTCACATTACCGCTACCGCAGCTCCAACCTGGCCC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCACCTTGGGCTCAGGTCTaGAGGGTCACTCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAPWAQV*RVTLWN
Trigger: ATTCCAGAGAGTGACCCTGCAGACCTGAGCCCAAGG...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGGGGCTGGTTGTGGGTaGTGTGTGCAGTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFGAGCG*CVQSRG
Trigger: TCCTCTGGACTGCACACAGCACCCACAACCAGCCCC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTCAATCAGGCCACCACTaGTGCCCACTACGGAAACGG +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCQSGHH*CPLRKR
Trigger: CCGTTTCCGTAGTGGGCACCAGTGGTGGCCTGATTG...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTCGCTGATGATGGTCTaGAAGAGGCCTCCGAGCGCG +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFSLMMV*KRPPSA
Trigger: CGCGCTCGGAGGCCTCTTCCAGACCATCATCAGCGA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTCGCTGATGATGGTCTaGAAGAGGCCTCCGAGCGCG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVASLMMV*KRPPSA
Trigger: CGCGCTCGGAGGCCTCTTCCAGACCATCATCAGCGA...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGAAAACTGCCTCAGCTTaGCTTCAATGCTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLKTASA*LQCFCA
Trigger: GGCACAGAAGCATTGAAGCCAAGCTGAGGCAGTTTT...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGCTGGGGGAAGAGGGTaGCGTCTGATACGACCAGCT +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNAGGRG*RLIRPA
Trigger: AGCTGGTCGTATCAGACGCCACCCTCTTCCCCCAGC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGGCTGGGGGAAGAGGGTaGCGTCTGATACGACCAGCT +
Preference number: 4 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMAGGRG*RLIRPA
Trigger: AGCTGGTCGTATCAGACGCCACCCTCTTCCCCCAGC...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCCTGCTGGGCCAGGTTaGAGCTGCGGTAGCGGTAAT +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNPAGPG*SCGSGN
Trigger: ATTACCGCTACCGCAGCTCCAACCTGGCCCAGCAGG...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGCCTGCTGGGCCAGGTTaGAGCTGCGGTAGCGGTAAT +
Preference number: 4 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMPAGPG*SCGSGN
Trigger: ATTACCGCTACCGCAGCTCCAACCTGGCCCAGCAGG...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCCTGCTGGGCCAGGTTaGAGCTGCGGTAGCGGTAAT +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLPAGPG*SCGSGN
Trigger: ATTACCGCTACCGCAGCTCCAACCTGGCCCAGCAGG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTAACCCGTTAGACAACTaGTTGGGGGCCTCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLNPLDN*LGASGG
Trigger: GCCGCCAGAGGCCCCCAACCAGTTGTCTAACGGGTT...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325064.9
ENST00000518547.6
CDS-3UTR CCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCATACAGTCATGCTCCGTaGTCTCTGAGCCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAYSHAP*SLSLLS
Trigger: GCTGAGGAGGCTCAGAGACCACGGAGCATGACTGTA...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCCTCACCAGGCCTGGTaGCAGCCGATACAGTCATGC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLPHQAW*QPIQSC
Trigger: GCATGACTGTATCGGCTGCCACCAGGCCTGGTGAGG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTCCTCACCAGGCCTGGTaGCAGCCGATACAGTCATGC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFPHQAW*QPIQSC
Trigger: GCATGACTGTATCGGCTGCCACCAGGCCTGGTGAGG...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTTCTCCTCACCAGGCCTaGTGGCAGCCGATACAGTCA +
Preference number: 4 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSSPHQA*WQPIQS
Trigger: TGACTGTATCGGCTGCCACCAGGCCTGGTGAGGAGA...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTCAGAGCAGCAGGGGGTaGTTGTCTGGGTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFQSSRG*LSGCCS
Trigger: GCTACAGCACCCAGACAACCACCCCCTGCTGCTCTG...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGCAGAGCAGCAGGGGGTaGTTGTCTGGGTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMQSSRG*LSGCCS
Trigger: GCTACAGCACCCAGACAACCACCCCCTGCTGCTCTG...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCAGAGCAGCAGGGGGTaGTTGTCTGGGTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLQSSRG*LSGCCS
Trigger: GCTACAGCACCCAGACAACCACCCCCTGCTGCTCTG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGCGCTGTTTCTTGGAATaGTGGAGGACTTGTCGAACT +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLRCFLE*WRTCRT
Trigger: AGTTCGACAAGTCCTCCACCATTCCAAGAAACAGCG...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTGGGACCAGCTCCAATaGTTCCCCGGCGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFWDQLQ*FPGGQK
Trigger: CTTCTGTCCGCCGGGGAACCATTGGAGCTGGTCCCA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAATGGGACCAGCTCCAATaGTTCCCCGGCGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQWDQLQ*FPGGQK
Trigger: CTTCTGTCCGCCGGGGAACCATTGGAGCTGGTCCCA...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCACTTCGGGCCTGGAAGTaGAGGGTTAACGGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWALRAWK*RVNGSL
Trigger: CAAGCTTCCGTTAACCCTCCACTTCCAGGCCCGAAG...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGACTGGGCTTCGGGCCTaGAAGTGGAGGGTTAACGGA +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRTGLRA*KWRVNG
Trigger: TCCGTTAACCCTCCACTTCCAGGCCCGAAGCCCAGT...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGGAGACAGTGGCACTTaGGGGTTCCCGTTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFGDSGT*GFPFLV
Trigger: GACCAGGAACGGGAACCCCCAAGTGCCACTGTCTCC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGGAGACAGTGGCACTTaGGGGTTCCCGTTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAGDSGT*GFPFLV
Trigger: GACCAGGAACGGGAACCCCCAAGTGCCACTGTCTCC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGGAGACAGTGGCACTTaGGGGTTCCCGTTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQGDSGT*GFPFLV
Trigger: GACCAGGAACGGGAACCCCCAAGTGCCACTGTCTCC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGCAGCATGCATGGGGCTaGTTGTGGGTGCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRQHAWG*LWVLCA
Trigger: TGCACACAGCACCCACAACCAGCCCCATGCATGCTG...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGAGGAGGGCAGTTTGTaGGGGTCCATGGTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAEEGSL*GSMVRL
Trigger: AAGCCTGACCATGGACCCTCACAAACTGCCCTCCTC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCGAGGAGGGCAGTTTGTaGGGGTCCATGGTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFEEGSL*GSMVRL
Trigger: AAGCCTGACCATGGACCCTCACAAACTGCCCTCCTC...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGGGAGTCACTGCTGTTaGCACTGTTCAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQGSHCC*HCSGCC
Trigger: GCAGCAGCCTGAACAGTGTCAACAGCAGTGACTCCC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGGGGAGTCACTGCTGTTaGCACTGTTCAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMGSHCC*HCSGCC
Trigger: GCAGCAGCCTGAACAGTGTCAACAGCAGTGACTCCC...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGGGAGTCACTGCTGTTaGCACTGTTCAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLGSHCC*HCSGCC
Trigger: GCAGCAGCCTGAACAGTGTCAACAGCAGTGACTCCC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCACTGGGATATGAATCCTaGGTCATGGGAGGACACGCT +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWALGYES*VMGGHA
Trigger: AGCGTGTCCTCCCATGACTCAGGATTCATATCCCAG...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTAGAAAAGCGAGGGGCTaGGCGATCGTTTGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCRKARG*AIVCRG
Trigger: ACCACGACAAACGATCGCTCAGCCCCTCGCTTTTCT...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAATCAGGCCACCACTGGTaGCCACTACGGAAACGGCAA +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQSGHHW*PLRKRQ
Trigger: TTGCCGTTTCCGTAGTGGGCACCAGTGGTGGCCTGA...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325064.9
ENST00000518547.6
CDS-3UTR GCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGTCAGGCCACCACTGGTaGCCACTACGGAAACGGCAA +
Preference number: 4 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMSGHHW*PLRKRQ
Trigger: TTGCCGTTTCCGTAGTGGGCACCAGTGGTGGCCTGA...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR GCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGGCCTCCGAGCGCGCTaGATTCCTTCTCAATCACAG +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQGLRAR*IPSQSQ
Trigger: CTGTGATTGAGAAGGAATGCAGCGCGCTCGGAGGCC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTTCTCTTTGCGGCGCTaGAGGGTGTTCACCAGAGGC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFFSLRR*RVFTRG
Trigger: GCCTCTGGTGAACACCCTGCAGCGCCGCAAAGAGAA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAATTCTCTTTGCGGCGCTaGAGGGTGTTCACCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQFSLRR*RVFTRG
Trigger: GCCTCTGGTGAACACCCTGCAGCGCCGCAAAGAGAA...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGGTTCTCGCTTCTCTTTaGGGCGCTGCAGGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRVLASL*GAAGCS
Trigger: TGAACACCCTGCAGCGCCGCAAAGAGAAGCGAGAAC...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTGTTCTCGCTTCTCTTTaGGGCGCTGCAGGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSVLASL*GAAGCS
Trigger: TGAACACCCTGCAGCGCCGCAAAGAGAAGCGAGAAC...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGGGGAGATTCTACGACTaGCCAGAGGCAGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMGRFYD*PEAAAC
Trigger: GCATGCTGCTGCCTCTGGGCAGTCGTAGAATCTCCC...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGGGAGATTCTACGACTaGCCAGAGGCAGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLGRFYD*PEAAAC
Trigger: GCATGCTGCTGCCTCTGGGCAGTCGTAGAATCTCCC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTCAATCAGGCCACCACTaGTGCCCACTACGGAAACGG +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFQSGHH*CPLRKR
Trigger: CCGTTTCCGTAGTGGGCACCAGTGGTGGCCTGATTG...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325064.9
ENST00000518547.6
CDS-3UTR CCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGGAAATCTTCCCAAACTaGATAGCTCCCCTTCATGTC +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLEIFPN*IAPLHV
Trigger: GACATGAAGGGGAGCTATCCAGTTTGGGAAGATTTC...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGCAGATCCAATCTCCCTaGTCCCACCACGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRQIQSP*SHHVCW
Trigger: CCAACACACGTGGTGGGACCAGGGAGATTGGATCTG...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGAGACACTGGACTTTCTaGACATGGTGGTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRRHWTF*TWWCWG
Trigger: CCCCCAGCACCACCATGTCCAGAAAGTCCAGTGTCT...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGGGCTGCTGCAGACACTaGACTTTCTGGACATGGTGG +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRGCCRH*TFWTWW
Trigger: CCACCATGTCCAGAAAGTCCAGTGTCTGCAGCAGCC...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATAGCGGTAATGTGAGCTaGGGGAATGCGAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNSGNVS*GNASGS
Trigger: GCTCCCACTCGCATTCCCCCAGCTCACATTACCGCT...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGAGCGGTAATGTGAGCTaGGGGAATGCGAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMSGNVS*GNASGS
Trigger: GCTCCCACTCGCATTCCCCCAGCTCACATTACCGCT...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTAGCGGTAATGTGAGCTaGGGGAATGCGAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLSGNVS*GNASGS
Trigger: GCTCCCACTCGCATTCCCCCAGCTCACATTACCGCT...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCAGCGGTAATGTGAGCTaGGGGAATGCGAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVASGNVS*GNASGS
Trigger: GCTCCCACTCGCATTCCCCCAGCTCACATTACCGCT...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTCCCGTGGGCCCCACGTaGGACTCACTTGATAAACTA +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCPVGPT*DSLDKL
Trigger: TAGTTTATCAAGTGAGTCCCACGTGGGGCCCACGGG...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR CCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGTACAGTCATGCTCCGTaGTCTCTGAGCCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRYSHAP*SLSLLS
Trigger: GCTGAGGAGGCTCAGAGACCACGGAGCATGACTGTA...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAATCTCCTCACCAGGCCTaGTGGCAGCCGATACAGTCA +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQSPHQA*WQPIQS
Trigger: TGACTGTATCGGCTGCCACCAGGCCTGGTGAGGAGA...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTCTCCTCACCAGGCCTaGTGGCAGCCGATACAGTCA +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFSPHQA*WQPIQS
Trigger: TGACTGTATCGGCTGCCACCAGGCCTGGTGAGGAGA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGAGGTCTGGGACGGTTaGGGTCTTGACAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAEVWDG*GLDRDH
Trigger: GTGATCCCTGTCAAGACCCCAACCGTCCCAGACCTC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGAGGTCTGGGACGGTTaGGGTCTTGACAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLEVWDG*GLDRDH
Trigger: GTGATCCCTGTCAAGACCCCAACCGTCCCAGACCTC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGAGGTCTGGGACGGTTaGGGTCTTGACAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFEVWDG*GLDRDH
Trigger: GTGATCCCTGTCAAGACCCCAACCGTCCCAGACCTC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGAGGTCTGGGACGGTTaGGGTCTTGACAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNEVWDG*GLDRDH
Trigger: GTGATCCCTGTCAAGACCCCAACCGTCCCAGACCTC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATATGCTGGTGACACCTTaGGGGCCCTCACCCACAGAT +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNMLVTP*GPSPTD
Trigger: ATCTGTGGGTGAGGGCCCCCAAGGTGTCACCAGCAT...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGATGCTGGTGACACCTTaGGGGCCCTCACCCACAGAT +
Preference number: 4 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMMLVTP*GPSPTD
Trigger: ATCTGTGGGTGAGGGCCCCCAAGGTGTCACCAGCAT...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCATGCTGGTGACACCTTaGGGGCCCTCACCCACAGAT +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFMLVTP*GPSPTD
Trigger: ATCTGTGGGTGAGGGCCCCCAAGGTGTCACCAGCAT...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATACTGGGCTTCGGGCCTaGAAGTGGAGGGTTAACGGA +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNTGLRA*KWRVNG
Trigger: TCCGTTAACCCTCCACTTCCAGGCCCGAAGCCCAGT...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGACTGGGCTTCGGGCCTaGAAGTGGAGGGTTAACGGA +
Preference number: 4 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMTGLRA*KWRVNG
Trigger: TCCGTTAACCCTCCACTTCCAGGCCCGAAGCCCAGT...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTCAGCATGCATGGGGCTaGTTGTGGGTGCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFQHAWG*LWVLCA
Trigger: TGCACACAGCACCCACAACCAGCCCCATGCATGCTG...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGAGTCATCAAGATTGGTaGGCTAAACCACAGGCACTA +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLSHQDW*AKPQAL
Trigger: TAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACT...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
3UTR CAA 72 bp AAAACAAGCCCCCAGATTGGTAAACACATTGGCAAGTaGCTAGACTCCAAGCTGGCTACCCTTGTCAAATCT +
Preference number: 4 (lower is better)
Translates to: KTSPQIGKHIGK*LDSKLATLVKS
Trigger: AGATTTGACAAGGGTAGCCAGCTTGGAGTCTAGCAACTTGCCAATGTGTTTACCAATCTGGGGGCTTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACTCATGCACATCCTGGTaGGAGCAGATCCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINSCTSW*EQIQSP
Trigger: GGGAGATTGGATCTGCTCTCACCAGGATGTGCATGA...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGTCATGCACATCCTGGTaGGAGCAGATCCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRSCTSW*EQIQSP
Trigger: GGGAGATTGGATCTGCTCTCACCAGGATGTGCATGA...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGAGAGCACTGTCCAACTaGGGCTGGATATCACCTCTC +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRRALSN*GWISPL
Trigger: GAGAGGTGATATCCAGCCTCAGTTGGACAGTGCTCT...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGAGAGCACTGTCCAACTaGGGCTGGATATCACCTCTC +
Preference number: 4 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWRALSN*GWISPL
Trigger: GAGAGGTGATATCCAGCCTCAGTTGGACAGTGCTCT...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATTTCCAGCTAGGGATCTaGGATGACGGGAACATGCCG +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNFQLGI*DDGNMP
Trigger: CGGCATGTTCCCGTCATCTCAGATCCCTAGCTGGAA...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTTCCAGCTAGGGATCTaGGATGACGGGAACATGCCG +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFFQLGI*DDGNMP
Trigger: CGGCATGTTCCCGTCATCTCAGATCCCTAGCTGGAA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTTGTCGAACTCCTGCTaGTCTGCCTCCTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVALSNSC*SASWSP
Trigger: TGGTGACCAGGAGGCAGATCAGCAGGAGTTCGACAA...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGTTGTCGAACTCCTGCTaGTCTGCCTCCTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMLSNSC*SASWSP
Trigger: TGGTGACCAGGAGGCAGATCAGCAGGAGTTCGACAA...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTGTCGAACTCCTGCTaGTCTGCCTCCTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLLSNSC*SASWSP
Trigger: TGGTGACCAGGAGGCAGATCAGCAGGAGTTCGACAA...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGGTCGGTAGGACTGGCTaGTGTCGCTGTTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRVGRTG*CRCFLE
Trigger: TTCCAAGAAACAGCGACATCAGCCAGTCCTACCGAC...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAGAAAAGCGAGGGGCTaGGCGATCGTTTGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQRKARG*AIVCRG
Trigger: ACCACGACAAACGATCGCTCAGCCCCTCGCTTTTCT...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTAGAAAAGCGAGGGGCTaGGCGATCGTTTGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFRKARG*AIVCRG
Trigger: ACCACGACAAACGATCGCTCAGCCCCTCGCTTTTCT...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGCGGATGCATTTACCATaGAGCTACCAGAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLRMHLP*SYQKKF
Trigger: GAATTTCTTCTGGTAGCTTCATGGTAAATGCATCCG...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTACTCCTCCTCTGCCTTaGGAGGGTTCGGTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSTPPLP*EGSVRN
Trigger: ATTTCTGACCGAACCCTCTCAAGGCAGAGGAGGAGT...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGAACATAAAATGTCCTTaGGCAATCGCAGCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: ASATFSHQDWWAKPQALLNIKCP*AIAAVF
Trigger: GAACACTGCTGCGATTGCTCAAGGACATTTTATGTT...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCCGGCAAAGCCCATCTTaGTGCAGAGAAAATCGCCCG +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFRQSPS*CRENRP
Trigger: CGGGCGATTTTCTCTGCATCAAGATGGGCTTTGCCG...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR GCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCACAAGAAGGCAGCTGCTaGTACTACTGTTGTCCGAAG +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAQEGSC*YYCCPK
Trigger: CTTCGGACAACAGTAGTAGCAGCAGCTGCCTTCTTG...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTGTCCAAGAAGGCAGCTaGTGCTACTACTGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCVQEGS*CYYCCP
Trigger: CGGACAACAGTAGTAGCAGCAGCTGCCTTCTTGGAC...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACCACTGTTCAGGCTGCTaGAGACACTGGACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINHCSGC*RHWTFW
Trigger: CCAGAAAGTCCAGTGTCTGCAGCAGCCTGAACAGTG...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTGAGATGACGGGAACATaGCGGGCCCAATGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCEMTGT*RAQWCN
Trigger: ATTACACCATTGGGCCCGGCATGTTCCCGTCATCTC...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR GCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGTTCTCGCTTCTCTTTaGGGCGCTGCAGGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLVLASL*GAAGCS
Trigger: TGAACACCCTGCAGCGCCGCAAAGAGAAGCGAGAAC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGTTCTCGCTTCTCTTTaGGGCGCTGCAGGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNVLASL*GAAGCS
Trigger: TGAACACCCTGCAGCGCCGCAAAGAGAAGCGAGAAC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGGTCCGTCGGATAGTTaGAACCCCTGGAGTGACCAT +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQGPSDS*NPWSDH
Trigger: ATGGTCACTCCAGGGGTTGCAACTATCCGACGGACC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGGTCCGTCGGATAGTTaGAACCCCTGGAGTGACCAT +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNGPSDS*NPWSDH
Trigger: ATGGTCACTCCAGGGGTTGCAACTATCCGACGGACC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGGAATTGCCTGTCTGTaGTCCTCAGGGATACTGGGC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAGIACL*SSGILG
Trigger: GCCCAGTATCCCTGAGGAGCACAGACAGGCAATTCC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGGAATTGCCTGTCTGTaGTCCTCAGGGATACTGGGC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLGIACL*SSGILG
Trigger: GCCCAGTATCCCTGAGGAGCACAGACAGGCAATTCC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGGAATTGCCTGTCTGTaGTCCTCAGGGATACTGGGC +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNGIACL*SSGILG
Trigger: GCCCAGTATCCCTGAGGAGCACAGACAGGCAATTCC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCCTTGGGCTCAGGTCTaGAGGGTCACTCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNPWAQV*RVTLWN
Trigger: ATTCCAGAGAGTGACCCTGCAGACCTGAGCCCAAGG...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAACCTTGGGCTCAGGTCTaGAGGGTCACTCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQPWAQV*RVTLWN
Trigger: ATTCCAGAGAGTGACCCTGCAGACCTGAGCCCAAGG...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATACTTCGTGGTTCCCCTaGCCCAACCCCCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNTSWFP*PNPLYA
Trigger: TGCATAAAGGGGGTTGGGGCAGGGGAACCACGAAGT...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCCTTCACTCTGAATATTaGTCATCAATTGTTACTCCT +
Preference number: 4 (lower is better)
Translates to: TINEKLKWEILRLPRGSSLHSEY*SSIVTP
Trigger: AGGAGTAACAATTGATGAGCAATATTCAGAGTGAAG...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTGTTGTGGGTGCTGTGTaGAGTCCAGAGGAATCATGG +
Preference number: 4 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSVVGAV*SPEESW
Trigger: CCATGATTCCTCTGGACTGCACACAGCACCCACAAC...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTACCAAACTCCTCCTCTaGCTTGAGAGGGTTCGGTCA +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCTKLLL*LERVRS
Trigger: TGACCGAACCCTCTCAAGGCAGAGGAGGAGTTTGGT...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTCAGATCCAATCTCCCTaGTCCCACCACGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFQIQSP*SHHVCW
Trigger: CCAACACACGTGGTGGGACCAGGGAGATTGGATCTG...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAGACACTGGACTTTCTaGACATGGTGGTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQRHWTF*TWWCWG
Trigger: CCCCCAGCACCACCATGTCCAGAAAGTCCAGTGTCT...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCAGACACTGGACTTTCTaGACATGGTGGTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVARHWTF*TWWCWG
Trigger: CCCCCAGCACCACCATGTCCAGAAAGTCCAGTGTCT...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGGCTGCTGCAGACACTaGACTTTCTGGACATGGTGG +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFGCCRH*TFWTWW
Trigger: CCACCATGTCCAGAAAGTCCAGTGTCTGCAGCAGCC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGGCTGCTGCAGACACTaGACTTTCTGGACATGGTGG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAGCCRH*TFWTWW
Trigger: CCACCATGTCCAGAAAGTCCAGTGTCTGCAGCAGCC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACATGAATCCTGAGTCATaGGAGGACACGCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINMNPES*EDTLDS
Trigger: GCTGTCCAGCGTGTCCTCCCATGACTCAGGATTCAT...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAACCCGTGGGCCCCACGTaGGACTCACTTGATAAACTA +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQPVGPT*DSLDKL
Trigger: TAGTTTATCAAGTGAGTCCCACGTGGGGCCCACGGG...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTACAGTCATGCTCCGTaGTCTCTGAGCCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFYSHAP*SLSLLS
Trigger: GCTGAGGAGGCTCAGAGACCACGGAGCATGACTGTA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAATACAGTCATGCTCCGTaGTCTCTGAGCCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQYSHAP*SLSLLS
Trigger: GCTGAGGAGGCTCAGAGACCACGGAGCATGACTGTA...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTTGAGGCTGGACGCTTaGCTTGGAACATCCGTCGGT +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFLRLDA*LGTSVG
Trigger: ACCGACGGATGTTCCAAGCCAAGCGTCCAGCCTCAA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCTTGAGGCTGGACGCTTaGCTTGGAACATCCGTCGGT +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFLRLDA*LGTSVG
Trigger: ACCGACGGATGTTCCAAGCCAAGCGTCCAGCCTCAA...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTGAGGCTGGACGCTTaGCTTGGAACATCCGTCGGT +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLLRLDA*LGTSVG
Trigger: ACCGACGGATGTTCCAAGCCAAGCGTCCAGCCTCAA...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACGATAGTTGCAACCCCTaGAGTGACCATAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINDSCNP*SDHSRS
Trigger: GGACCTGCTATGGTCACTCCAGGGGTTGCAACTATC...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGGGTTAACGGAAGCTTaGCCGCTCCACATTGAGGAG +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLGLTEA*PLHIEE
Trigger: CTCCTCAATGTGGAGCGGCCAAGCTTCCGTTAACCC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGGGTTAACGGAAGCTTaGCCGCTCCACATTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNGLTEA*PLHIEE
Trigger: CTCCTCAATGTGGAGCGGCCAAGCTTCCGTTAACCC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGGGTTAACGGAAGCTTaGCCGCTCCACATTGAGGAG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAGLTEA*PLHIEE
Trigger: CTCCTCAATGTGGAGCGGCCAAGCTTCCGTTAACCC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAACTTCGGGCCTGGAAGTaGAGGGTTAACGGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQLRAWK*RVNGSL
Trigger: CAAGCTTCCGTTAACCCTCCACTTCCAGGCCCGAAG...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGCTTCGGGCCTGGAAGTaGAGGGTTAACGGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMLRAWK*RVNGSL
Trigger: CAAGCTTCCGTTAACCCTCCACTTCCAGGCCCGAAG...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTCTTCGGGCCTGGAAGTaGAGGGTTAACGGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFLRAWK*RVNGSL
Trigger: CAAGCTTCCGTTAACCCTCCACTTCCAGGCCCGAAG...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTGGGGGTTCCCGTTCCTaGTCTTCAGCTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSGGSRS*SSASLS
Trigger: AGAAAGTGAAGCTGAAGACCAGGAACGGGAACCCCC...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAATTGTGGAGTATCCCTTaGGCTCAGGTCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQLWSIP*AQVCRV
Trigger: GACCCTGCAGACCTGAGCCCAAGGGATACTCCACAA...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTTGTGGAGTATCCCTTaGGCTCAGGTCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFLWSIP*AQVCRV
Trigger: GACCCTGCAGACCTGAGCCCAAGGGATACTCCACAA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATTTGTGGAGTATCCCTTaGGCTCAGGTCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNLWSIP*AQVCRV
Trigger: GACCCTGCAGACCTGAGCCCAAGGGATACTCCACAA...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTCACGCCCCTTCGGATaGCGTTCAGCATGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVASRPFG*RSACLL
Trigger: GAGAAGACATGCTGAACGCCATCCGAAGGGGCGTGA...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTCACGCCCCTTCGGATaGCGTTCAGCATGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFSRPFG*RSACLL
Trigger: GAGAAGACATGCTGAACGCCATCCGAAGGGGCGTGA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTCATGCACATCCTGGTaGGAGCAGATCCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVASCTSW*EQIQSP
Trigger: GGGAGATTGGATCTGCTCTCACCAGGATGTGCATGA...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTAGAGCACTGTCCAACTaGGGCTGGATATCACCTCTC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLRALSN*GWISPL
Trigger: GAGAGGTGATATCCAGCCTCAGTTGGACAGTGCTCT...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCCTGGGATATGAATCCTaGGTCATGGGAGGACACGCT +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVALGYES*VMGGHA
Trigger: AGCGTGTCCTCCCATGACTCAGGATTCATATCCCAG...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCTGGGATATGAATCCTaGGTCATGGGAGGACACGCT +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLLGYES*VMGGHA
Trigger: AGCGTGTCCTCCCATGACTCAGGATTCATATCCCAG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGTCGGTAGGACTGGCTaGTGTCGCTGTTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAVGRTG*CRCFLE
Trigger: TTCCAAGAAACAGCGACATCAGCCAGTCCTACCGAC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGTCGGTAGGACTGGCTaGTGTCGCTGTTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQVGRTG*CRCFLE
Trigger: TTCCAAGAAACAGCGACATCAGCCAGTCCTACCGAC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTAATCTGCAGGGTGTATaGAACCCACCAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSNLQGV*NPPNSS
Trigger: GGAGGAGTTTGGTGGGTTTCATACACCCTGCAGATT...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTGTCCGAAGCTGGGACTaGAGCTTTCCTGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCVRSWD*SFPALF
Trigger: AAACAAAGCAGGAAAGCTGCAGTCCCAGCTTCGGAC...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACGTCCGAAGCTGGGACTaGAGCTTTCCTGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINVRSWD*SFPALF
Trigger: AAACAAAGCAGGAAAGCTGCAGTCCCAGCTTCGGAC...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGTCCAAGAAGGCAGCTaGTGCTACTACTGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLVQEGS*CYYCCP
Trigger: CGGACAACAGTAGTAGCAGCAGCTGCCTTCTTGGAC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCGTCCAAGAAGGCAGCTaGTGCTACTACTGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFVQEGS*CYYCCP
Trigger: CGGACAACAGTAGTAGCAGCAGCTGCCTTCTTGGAC...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTCACTGTTCAGGCTGCTaGAGACACTGGACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFHCSGC*RHWTFW
Trigger: CCAGAAAGTCCAGTGTCTGCAGCAGCCTGAACAGTG...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGAGATGACGGGAACATaGCGGGCCCAATGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNEMTGT*RAQWCN
Trigger: ATTACACCATTGGGCCCGGCATGTTCCCGTCATCTC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGAGATGACGGGAACATaGCGGGCCCAATGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAEMTGT*RAQWCN
Trigger: ATTACACCATTGGGCCCGGCATGTTCCCGTCATCTC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGAACTCCTGCTGATCTaGCTCCTGGTCACCACTTAC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLELLLI*LLVTTY
Trigger: GTAAGTGGTGACCAGGAGGCAGATCAGCAGGAGTTC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCGAACTCCTGCTGATCTaGCTCCTGGTCACCACTTAC +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFELLLI*LLVTTY
Trigger: GTAAGTGGTGACCAGGAGGCAGATCAGCAGGAGTTC...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGAACTCCTGCTGATCTaGCTCCTGGTCACCACTTAC +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNELLLI*LLVTTY
Trigger: GTAAGTGGTGACCAGGAGGCAGATCAGCAGGAGTTC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGAACTCCTGCTGATCTaGCTCCTGGTCACCACTTAC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFELLLI*LLVTTY
Trigger: GTAAGTGGTGACCAGGAGGCAGATCAGCAGGAGTTC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGTTGTGGGTGCTGTGTaGAGTCCAGAGGAATCATGG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAVVGAV*SPEESW
Trigger: CCATGATTCCTCTGGACTGCACACAGCACCCACAAC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAACCAAACTCCTCCTCTaGCTTGAGAGGGTTCGGTCA +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQTKLLL*LERVRS
Trigger: TGACCGAACCCTCTCAAGGCAGAGGAGGAGTTTGGT...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACGAGCCAACAGGAATCTaGAGGGTGTATGAAACCCAC +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINEPTGI*RVYETH
Trigger: GTGGGTTTCATACACCCTGCAGATTCCTGTTGGCTC...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATACTGTTGTCCGAAGCTaGGACTGCAGCTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNTVVRS*DCSFPA
Trigger: AGCAGGAAAGCTGCAGTCCCAGCTTCGGACAACAGT...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCACTGTTGTCCGAAGCTaGGACTGCAGCTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVATVVRS*DCSFPA
Trigger: AGCAGGAAAGCTGCAGTCCCAGCTTCGGACAACAGT...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATATGAATCCTGAGTCATaGGAGGACACGCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNMNPES*EDTLDS
Trigger: GCTGTCCAGCGTGTCCTCCCATGACTCAGGATTCAT...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCATGAATCCTGAGTCATaGGAGGACACGCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAMNPES*EDTLDS
Trigger: GCTGTCCAGCGTGTCCTCCCATGACTCAGGATTCAT...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTATGAATCCTGAGTCATaGGAGGACACGCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFMNPES*EDTLDS
Trigger: GCTGTCCAGCGTGTCCTCCCATGACTCAGGATTCAT...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTGATGGTGACTTGGACTaGAAGGCATCCTGGGATATG +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCDGDLD*KASWDM
Trigger: CATATCCCAGGATGCCTTCCAGTCCAAGTCACCATC...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGATGTCGCTGTTTCTTaGAATGGTGGAGGACTTGTC +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWADVAVS*NGGGLV
Trigger: GACAAGTCCTCCACCATTCCAAGAAACAGCGACATC...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGATAGTTGCAACCCCTaGAGTGACCATAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQDSCNP*SDHSRS
Trigger: GGACCTGCTATGGTCACTCCAGGGGTTGCAACTATC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGGGGGTTCCCGTTCCTaGTCTTCAGCTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLGGSRS*SSASLS
Trigger: AGAAAGTGAAGCTGAAGACCAGGAACGGGAACCCCC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCGGGGGTTCCCGTTCCTaGTCTTCAGCTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFGGSRS*SSASLS
Trigger: AGAAAGTGAAGCTGAAGACCAGGAACGGGAACCCCC...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGGGGGTTCCCGTTCCTaGTCTTCAGCTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNGGSRS*SSASLS
Trigger: AGAAAGTGAAGCTGAAGACCAGGAACGGGAACCCCC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTCATGTCTTCTCCTTGTaGAGTATCCCTTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCHVFSL*SIPWAQ
Trigger: CTGAGCCCAAGGGATACTCCACAAGGAGAAGACATG...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACAAATTAACTACTTCGTaGTTCCCCTGCCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINKLTTS*FPCPNP
Trigger: GGGGTTGGGGCAGGGGAACCACGAAGTAGTTAATTT...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAACGCACCCAGCCTGCTaGGCACAGTTAAGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQTHPAC*AQLSKR
Trigger: CCTTTTACTTAACTGTGCCCAGCAGGCTGGGTGCGT...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTCTTCCGAGATGGTCTaGAGGTGGGTTATTTCCCCT +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFSSEMV*RWVISP
Trigger: AGGGGAAATAACCCACCTTCAGACCATCTCGGAAGA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAATCTTCCGAGATGGTCTaGAGGTGGGTTATTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQSSEMV*RWVISP
Trigger: AGGGGAAATAACCCACCTTCAGACCATCTCGGAAGA...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTAATCACCTGTTCACTTaGGGAGGGCAGTTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLNHLFT*GGQFVR
Trigger: CCTCACAAACTGCCCTCCTCAAGTGAACAGGTGATT...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTAATCACCTGTTCACTTaGGGAGGGCAGTTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFNHLFT*GGQFVR
Trigger: CCTCACAAACTGCCCTCCTCAAGTGAACAGGTGATT...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATTGCCCTGTTATGACCTaGCTGCTAAGGGACTTGCTT +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNCPVMT*LLRDLL
Trigger: AAGCAAGTCCCTTAGCAGTCAGGTCATAACAGGGCA...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTGCCCTGTTATGACCTaGCTGCTAAGGGACTTGCTT +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFCPVMT*LLRDLL
Trigger: AAGCAAGTCCCTTAGCAGTCAGGTCATAACAGGGCA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGTCCGAAGCTGGGACTaGAGCTTTCCTGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFVRSWD*SFPALF
Trigger: AAACAAAGCAGGAAAGCTGCAGTCCCAGCTTCGGAC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAACAAGAAGGCAGCTGCTaGTACTACTGTTGTCCGAAG +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQQEGSC*YYCCPK
Trigger: CTTCGGACAACAGTAGTAGCAGCAGCTGCCTTCTTG...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGCTTCAATGCTTCTGTaGCTCATGCACATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAASMLL*LMHILV
Trigger: CACCAGGATGTGCATGAGGCACAGAAGCATTGAAGC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGCTTCAATGCTTCTGTaGCTCATGCACATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQASMLL*LMHILV
Trigger: CACCAGGATGTGCATGAGGCACAGAAGCATTGAAGC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGGCCTTCCGGACAGCCTaGTTTTCTGTTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRAFRTA*FSVSSN
Trigger: ATTGGAAGAAACAGAAAAGCAGGCTGTCCGGAAGGC...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACTTCACTTTCTGGAATTaGCTGTCTGTGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINFTFWN*LSVLLR
Trigger: CCTGAGGAGCACAGACAGGCAATTCCAGAAAGTGAA...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTTTCACTTTCTGGAATTaGCTGTCTGTGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSFTFWN*LSVLLR
Trigger: CCTGAGGAGCACAGACAGGCAATTCCAGAAAGTGAA...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACTTAACGCACCCAGCCTaGTGGGCACAGTTAAGTAAA +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINLTHPA*WAQLSK
Trigger: TTTACTTAACTGTGCCCAGCAGGCTGGGTGCGTTAA...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGAGCCAACAGGAATCTaGAGGGTGTATGAAACCCAC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFEPTGI*RVYETH
Trigger: GTGGGTTTCATACACCCTGCAGATTCCTGTTGGCTC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGATGGTGACTTGGACTaGAAGGCATCCTGGGATATG +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLDGDLD*KASWDM
Trigger: CATATCCCAGGATGCCTTCCAGTCCAAGTCACCATC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGATGGTGACTTGGACTaGAAGGCATCCTGGGATATG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVADGDLD*KASWDM
Trigger: CATATCCCAGGATGCCTTCCAGTCCAAGTCACCATC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGATGGTGACTTGGACTaGAAGGCATCCTGGGATATG +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQDGDLD*KASWDM
Trigger: CATATCCCAGGATGCCTTCCAGTCCAAGTCACCATC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACGATGTCGCTGTTTCTTaGAATGGTGGAGGACTTGTC +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINDVAVS*NGGGLV
Trigger: GACAAGTCCTCCACCATTCCAAGAAACAGCGACATC...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAACATGTCTTCTCCTTGTaGAGTATCCCTTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQHVFSL*SIPWAQ
Trigger: CTGAGCCCAAGGGATACTCCACAAGGAGAAGACATG...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCATGTCTTCTCCTTGTaGAGTATCCCTTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNHVFSL*SIPWAQ
Trigger: CTGAGCCCAAGGGATACTCCACAAGGAGAAGACATG...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTCATGTCTTCTCCTTGTaGAGTATCCCTTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFHVFSL*SIPWAQ
Trigger: CTGAGCCCAAGGGATACTCCACAAGGAGAAGACATG...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCAAATTAACTACTTCGTaGTTCCCCTGCCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAKLTTS*FPCPNP
Trigger: GGGGTTGGGGCAGGGGAACCACGAAGTAGTTAATTT...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTCAATCAACGAGAAACTaGAGTGGGAGATTCTACGAC +
Preference number: 4 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSQSTRN*SGRFYD
Trigger: GTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTG...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTAAAGCGCTCGAAAACTaGCTCAGCTTGGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFKALEN*LSLASM
Trigger: CATTGAAGCCAAGCTGAGGCAGTTTTCGAGCGCTTT...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCAAAGCGCTCGAAAACTaGCTCAGCTTGGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFKALEN*LSLASM
Trigger: CATTGAAGCCAAGCTGAGGCAGTTTTCGAGCGCTTT...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGCCTTCCGGACAGCCTaGTTTTCTGTTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFAFRTA*FSVSSN
Trigger: ATTGGAAGAAACAGAAAAGCAGGCTGTCCGGAAGGC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGCCTTCCGGACAGCCTaGTTTTCTGTTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQAFRTA*FSVSSN
Trigger: ATTGGAAGAAACAGAAAAGCAGGCTGTCCGGAAGGC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATTTCACTTTCTGGAATTaGCTGTCTGTGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNFTFWN*LSVLLR
Trigger: CCTGAGGAGCACAGACAGGCAATTCCAGAAAGTGAA...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAATTCACTTTCTGGAATTaGCTGTCTGTGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQFTFWN*LSVLLR
Trigger: CCTGAGGAGCACAGACAGGCAATTCCAGAAAGTGAA...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR GCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCTTAACGCACCCAGCCTaGTGGGCACAGTTAAGTAAA +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFLTHPA*WAQLSK
Trigger: TTTACTTAACTGTGCCCAGCAGGCTGGGTGCGTTAA...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCACCTTGCAGCGATTTCTaGTTTTGCAAAAACCATCTC +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAPCSDF*FCKNHL
Trigger: GAGATGGTTTTTGCAAAAGCAGAAATCGCTGCAAGG...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTAAAACTGCCTCAGCTTaGCTTCAATGCTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFKTASA*LQCFCA
Trigger: GGCACAGAAGCATTGAAGCCAAGCTGAGGCAGTTTT...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGTGGTCTTTATCCAGCTaGTTGGCCACTTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWWSLSS*LATFFH
Trigger: ATGGAAGAAAGTGGCCAACCAGCTGGATAAAGACCA...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAATAATGAGCGTAGTCTaGAAGGTGGACAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQIMSVV*KVDRGD
Trigger: GTCACCTCTGTCCACCTTCCAGACTACGCTCATTAT...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCATAATGAGCGTAGTCTaGAAGGTGGACAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFIMSVV*KVDRGD
Trigger: GTCACCTCTGTCCACCTTCCAGACTACGCTCATTAT...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTACATGCCGGGCCCAATaGTGTAATAATGAGCGTAGT +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLTCRAQ*CNNERS
Trigger: ACTACGCTCATTATTACACCATTGGGCCCGGCATGT...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTACATGCCGGGCCCAATaGTGTAATAATGAGCGTAGT +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFTCRAQ*CNNERS
Trigger: ACTACGCTCATTATTACACCATTGGGCCCGGCATGT...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCCGCTGTTTCTTGGAATaGTGGAGGACTTGTCGAACT +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVARCFLE*WRTCRT
Trigger: AGTTCGACAAGTCCTCCACCATTCCAAGAAACAGCG...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCGCTGTTTCTTGGAATaGTGGAGGACTTGTCGAACT +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNRCFLE*WRTCRT
Trigger: AGTTCGACAAGTCCTCCACCATTCCAAGAAACAGCG...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAACGCTGTTTCTTGGAATaGTGGAGGACTTGTCGAACT +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQRCFLE*WRTCRT
Trigger: AGTTCGACAAGTCCTCCACCATTCCAAGAAACAGCG...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGATGTCGCTGTTTCTTaGAATGGTGGAGGACTTGTC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLDVAVS*NGGGLV
Trigger: GACAAGTCCTCCACCATTCCAAGAAACAGCGACATC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTAGCGATCGTTTGTCGTaGTCTTCTTCAGTTTCACGC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFSDRLS*SSSVSR
Trigger: GCGTGAAACTGAAGAAGACCACGACAAACGATCGCT...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCAGCGATCGTTTGTCGTaGTCTTCTTCAGTTTCACGC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVASDRLS*SSSVSR
Trigger: GCGTGAAACTGAAGAAGACCACGACAAACGATCGCT...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTAGCGATCGTTTGTCGTaGTCTTCTTCAGTTTCACGC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLSDRLS*SSSVSR
Trigger: GCGTGAAACTGAAGAAGACCACGACAAACGATCGCT...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTAACGAGAAACTGAAGTaGGAGATTCTACGACTGCCC +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFNEKLK*EILRLP
Trigger: GGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTT...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTAACGAGAAACTGAAGTaGGAGATTCTACGACTGCCC +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLNEKLK*EILRLP
Trigger: GGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTT...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAAGAGATACTTATCATTaGCATCTTGGAGAGCACTGT +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWARDTYH*HLGEHC
Trigger: ACAGTGCTCTCCAAGATGTCAATGATAAGTATCTCT...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCCAATCAACGAGAAACTaGAGTGGGAGATTCTACGAC +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFQSTRN*SGRFYD
Trigger: GTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTG...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGAACATAAAATGTCCTTaGGCAATCGCAGCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRNIKCP*AIAAVF
Trigger: GAACACTGCTGCGATTGCTCAAGGACATTTTATGTT...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGCTAGACTACTACAATaGATCTACAAAAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAARLLQ*IYKSLW
Trigger: CCACAAGCTTTTGTAGATGCATTGTAGTAGTCTAGC...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCATATGGCTTATTCGGATaGATTTACCATGAAGCTACC +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAYGLFG*IYHEAT
Trigger: GGTAGCTTCATGGTAAATGCATCCGAATAAGCCATA...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGAAATCTTCCCAAACTaGATAGCTCCCCTTCATGTC +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQEIFPN*IAPLHV
Trigger: GACATGAAGGGGAGCTATCCAGTTTGGGAAGATTTC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTGGTCTTTATCCAGCTaGTTGGCCACTTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFWSLSS*LATFFH
Trigger: ATGGAAGAAAGTGGCCAACCAGCTGGATAAAGACCA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAATGGTCTTTATCCAGCTaGTTGGCCACTTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQWSLSS*LATFFH
Trigger: ATGGAAGAAAGTGGCCAACCAGCTGGATAAAGACCA...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACTTCTTCTTCAATCACTaGCCGCAGCATAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINFFFNH*PQHRDE
Trigger: TTCATCTCTATGCTGCGGCCAGTGATTGAAGAAGAA...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACGTTTGTGAGGGTCCATaGTCAGGCTTTTTAGATCTT +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINVCEGP*SGFLDL
Trigger: AAGATCTAAAAAGCCTGACCATGGACCCTCACAAAC...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCACACTGCAATCCAGTATaGCTTATTCGGATGCATTTA +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAHCNPV*LIRMHL
Trigger: TAAATGCATCCGAATAAGCCATACTGGATTGCAGTG...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTAGTCATCAAGATTGGTaGGCTAAACCACAGGCACTA +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFSHQDW*AKPQAL
Trigger: TAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACT...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGAGAGATACTTATCATTaGCATCTTGGAGAGCACTGT +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRRDTYH*HLGEHC
Trigger: ACAGTGCTCTCCAAGATGTCAATGATAAGTATCTCT...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACGGACTGCAGCTTTCCTaGTTTGTTTATGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINGLQLS*FVYEIF
Trigger: GAAGATTTCATAAACAAAGCAGGAAAGCTGCAGTCC...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAAGCGATTTCTGCTTTTaGAAAAACCATCTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWASDFCF*KNHLKH
Trigger: ATGCTTGAGATGGTTTTTGCAAAAGCAGAAATCGCT...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGCCTTGCAGCGATTTCTaGTTTTGCAAAAACCATCTC +
Preference number: 4 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMPCSDF*FCKNHL
Trigger: GAGATGGTTTTTGCAAAAGCAGAAATCGCTGCAAGG...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAATTCTTCTTCAATCACTaGCCGCAGCATAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQFFFNH*PQHRDE
Trigger: TTCATCTCTATGCTGCGGCCAGTGATTGAAGAAGAA...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTTCTTCTTCAATCACTaGCCGCAGCATAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFFFFNH*PQHRDE
Trigger: TTCATCTCTATGCTGCGGCCAGTGATTGAAGAAGAA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGTTTGTGAGGGTCCATaGTCAGGCTTTTTAGATCTT +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAVCEGP*SGFLDL
Trigger: AAGATCTAAAAAGCCTGACCATGGACCCTCACAAAC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCGTTTGTGAGGGTCCATaGTCAGGCTTTTTAGATCTT +
Preference number: 4 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFVCEGP*SGFLDL
Trigger: AAGATCTAAAAAGCCTGACCATGGACCCTCACAAAC...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGTTCCTGCTTTGTTTATaGAATCTTCCCAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRFLLCL*NLPKLD
Trigger: ATCCAGTTTGGGAAGATTTCATAAACAAAGCAGGAA...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTCTTCCATCTGTTCTTaGAGTGGGTTTATCAGACAA +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVASSICS*SGFIRQ
Trigger: TTGTCTGATAAACCCACTTCAAGAACAGATGGAAGA...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTCTTCCATCTGTTCTTaGAGTGGGTTTATCAGACAA +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLSSICS*SGFIRQ
Trigger: TTGTCTGATAAACCCACTTCAAGAACAGATGGAAGA...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCAGAGATACTTATCATTaGCATCTTGGAGAGCACTGT +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVARDTYH*HLGEHC
Trigger: ACAGTGCTCTCCAAGATGTCAATGATAAGTATCTCT...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACGAAATAATCATAATCTaGAACTTGGGAAGGGATGGT +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINEIIII*NLGRDG
Trigger: ACCATCCCTTCCCAAGTTTCAGATTATGATTATTTC...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGCACTTTTATCTATTGTaGTTACCTTGCAGCGATTTC +
Preference number: 4 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWHFYLL*LPCSDF
Trigger: GAAATCGCTGCAAGGTAATCACAATAGATAAAAGTG...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGGACTGCAGCTTTCCTaGTTTGTTTATGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAGLQLS*FVYEIF
Trigger: GAAGATTTCATAAACAAAGCAGGAAAGCTGCAGTCC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCATTTCTTATATTCTTTTaGGTGGTCTTTATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAFLIFF*VVFIQL
Trigger: CAGCTGGATAAAGACCACGCAAAAGAATATAAGAAA...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCATACTCTCACATCCAATaGAGTTATGTGTTAAAGCAT +
Preference number: 4 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAYSHIQ*SYVLKH
Trigger: ATGCTTTAACACATAACTGCATTGGATGTGAGAGTA...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTAGATCTTCCGAGATaGTCTGAAGGTGGGTTATTT +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLLDLPR*SEGGLF
Trigger: AAATAACCCACCTTCAGACCATCTCGGAAGATCTAA...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATTTAGATCTTCCGAGATaGTCTGAAGGTGGGTTATTT +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNLDLPR*SEGGLF
Trigger: AAATAACCCACCTTCAGACCATCTCGGAAGATCTAA...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTTAGATCTTCCGAGATaGTCTGAAGGTGGGTTATTT +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVALDLPR*SEGGLF
Trigger: AAATAACCCACCTTCAGACCATCTCGGAAGATCTAA...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCACTGCAATCCAGTATaGCTTATTCGGATGCATTTA +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNHCNPV*LIRMHL
Trigger: TAAATGCATCCGAATAAGCCATACTGGATTGCAGTG...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAATTCCTGCTTTGTTTATaGAATCTTCCCAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQFLLCL*NLPKLD
Trigger: ATCCAGTTTGGGAAGATTTCATAAACAAAGCAGGAA...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR TCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGAAATAATCATAATCTaGAACTTGGGAAGGGATGGT +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFEIIII*NLGRDG
Trigger: ACCATCCCTTCCCAAGTTTCAGATTATGATTATTTC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGAAATAATCATAATCTaGAACTTGGGAAGGGATGGT +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLEIIII*NLGRDG
Trigger: ACCATCCCTTCCCAAGTTTCAGATTATGATTATTTC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGAAATAATCATAATCTaGAACTTGGGAAGGGATGGT +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAEIIII*NLGRDG
Trigger: ACCATCCCTTCCCAAGTTTCAGATTATGATTATTTC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR TCA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCACTTTTATCTATTGTaGTTACCTTGCAGCGATTTC +
Preference number: 4 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNHFYLL*LPCSDF
Trigger: GAAATCGCTGCAAGGTAATCACAATAGATAAAAGTG...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTTACAGAAACAAACACTaGAATCCAGTATGGCTTATT +
Preference number: 4 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSYRNKH*NPVWLI
Trigger: AATAAGCCATACTGGATTGCAGTGTTTGTTTCTGTA...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACTACTCTCACATCCAATaGAGTTATGTGTTAAAGCAT +
Preference number: 4 (lower is better)
Translates to: TALPFWMYLDSIKVSTINYSHIQ*SYVLKH
Trigger: ATGCTTTAACACATAACTGCATTGGATGTGAGAGTA...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAATCTCAAGCATCATATaGACAATGCATCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQISSII*TMHQLL
Trigger: AAGTAGCTGATGCATTGTGCATATGATGCTTGAGAT...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTATCTCAAGCATCATATaGACAATGCATCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLISSII*TMHQLL
Trigger: AAGTAGCTGATGCATTGTGCATATGATGCTTGAGAT...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTAGCGATTTCTGCTTTTaGAAAAACCATCTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFSDFCF*KNHLKH
Trigger: ATGCTTGAGATGGTTTTTGCAAAAGCAGAAATCGCT...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTTCTTATATTCTTTTaGGTGGTCTTTATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLFLIFF*VVFIQL
Trigger: CAGCTGGATAAAGACCACGCAAAAGAATATAAGAAA...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTTTCTTATATTCTTTTaGGTGGTCTTTATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAFLIFF*VVFIQL
Trigger: CAGCTGGATAAAGACCACGCAAAAGAATATAAGAAA...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR GCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAGAAACAAACACTaGAATCCAGTATGGCTTATT +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAYRNKH*NPVWLI
Trigger: AATAAGCCATACTGGATTGCAGTGTTTGTTTCTGTA...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTCATCTGTTCTTGAAGTaGGTTTATCAGACAATCAAT +
Preference number: 4 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFHLFLK*VYQTIN
Trigger: ATTGATTGTCTGATAAACCCACTTCAAGAACAGATG...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCCATCTGTTCTTGAAGTaGGTTTATCAGACAATCAAT +
Preference number: 4 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAHLFLK*VYQTIN
Trigger: ATTGATTGTCTGATAAACCCACTTCAAGAACAGATG...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CCA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCATCTGTTCTTGAAGTaGGTTTATCAGACAATCAAT +
Preference number: 4 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLHLFLK*VYQTIN
Trigger: ATTGATTGTCTGATAAACCCACTTCAAGAACAGATG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS GCA 90 bp AGCAGAGCGGGTCAGCTCGCGGCGTCCGGATCTGTTGCTCGCAGCTaGGGCCGCCGCCTCCTTTTCACTCCTGCGCGCCCGGCCCCGGCG +
Preference number: 5 (lower is better)
Translates to: SRAGQLAASGSVARS*GRRLLFTPARPAPA
Trigger: CGCCGGGGCCGGGCGCGCAGGAGTGAAAAGGAGGCGGCGGCCGCAGCTGCGAGCAACAGATCCGGACGCCGCGAGCTGACCCGCTCTGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS GCA 90 bp AGCCGATACAGTCATGCTCCGTGGTCTCTGAGCCTCCTCAGCTGCTaGAGGTGGGCCGCTGGCGGTAGTGGGTCCTCCCCCGTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: SRYSHAPWSLSLLSC*RWAAGGSGSSPVGV
Trigger: GACCCCAACGGGGGAGGACCCACTACCGCCAGCGGCCCACCTGCAGCAGCTGAGGAGGCTCAGAGACCACGGAGCATGACTGTATCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520094.1
ENST00000520771.1
ENST00000523179.5
ENST00000523587.5
ENST00000524090.5
CDS TCA 90 bp CACAGGAGCCTGCTGGGCCAGGTTGGAGCTGCGGTAGCGGTAATGTaGGCTGGGGGAATGCGAGTGGGAGCCGCTGGACCGGGAGTCACT +
Preference number: 5 (lower is better)
Translates to: HRSLLGQVGAAVAVM*AGGMRVGAAGPGVT
Trigger: AGTGACTCCCGGTCCAGCGGCTCCCACTCGCATTCCCCCAGCTCACATTACCGCTACCGCAGCTCCAACCTGGCCCAGCAGGCTCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000522118.1
ENST00000522722.1
ENST00000523179.5
ENST00000523587.5
ENST00000524090.5
CDS CCA 90 bp GAGCCTGCTGGGCCAGGTTGGAGCTGCGGTAGCGGTAATGTGAGCTaGGGGAATGCGAGTGGGAGCCGCTGGACCGGGAGTCACTGCTGT +
Preference number: 5 (lower is better)
Translates to: EPAGPGWSCGSGNVS*GNASGSRWTGSHCC
Trigger: ACAGCAGTGACTCCCGGTCCAGCGGCTCCCACTCGCATTCCCCCAGCTCACATTACCGCTACCGCAGCTCCAACCTGGCCCAGCAGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000522118.1
ENST00000522722.1
ENST00000523179.5
ENST00000523587.5
ENST00000524090.5
CDS TCA 90 bp CGGGCCTGGAAGTGGAGGGTTAACGGAAGCTTGGCCGCTCCACATTaGGGAGGGCATGCTGGTGACACCTTGGGGGCCCTCACCCACAGA +
Preference number: 5 (lower is better)
Translates to: RAWKWRVNGSLAAPH*GGHAGDTLGALTHR
Trigger: TCTGTGGGTGAGGGCCCCCAAGGTGTCACCAGCATGCCCTCCTCAATGTGGAGCGGCCAAGCTTCCGTTAACCCTCCACTTCCAGGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS TCA 90 bp TGGAGTGACCATAGCAGGTCCCAGGGTGGTGGGGAGGCCAGCAGTTaGGGCTGGACGCTTGGCTTGGAACATCCGTCGGTAGGACTGGCT +
Preference number: 5 (lower is better)
Translates to: WSDHSRSQGGGEASS*GWTLGLEHPSVGLA
Trigger: AGCCAGTCCTACCGACGGATGTTCCAAGCCAAGCGTCCAGCCTCAACTGCTGGCCTCCCCACCACCCTGGGACCTGCTATGGTCACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CCA 90 bp GGGATACTGGGCTTCGGGCCTGGAAGTGGAGGGTTAACGGAAGCTTaGCCGCTCCACATTGAGGAGGGCATGCTGGTGACACCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: GILGFGPGSGGLTEA*PLHIEEGMLVTPWG
Trigger: CCCCCAAGGTGTCACCAGCATGCCCTCCTCAATGTGGAGCGGCCAAGCTTCCGTTAACCCTCCACTTCCAGGCCCGAAGCCCAGTATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CCA 90 bp GGAGTATCCCTTGGGCTCAGGTCTGCAGGGTCACTCTCTGGAATCTaGCCTGGGGAGACAGTGGCACTTGGGGGTTCCCGTTCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: GVSLGLRSAGSLSGI*PGETVALGGSRSWS
Trigger: AGACCAGGAACGGGAACCCCCAAGTGCCACTGTCTCCCCAGGCCAGATTCCAGAGAGTGACCCTGCAGACCTGAGCCCAAGGGATACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS GCA 90 bp GAATTTCACCTTCCGAGAGACCCACCTCGGACTCGCAGCCTCTTCTaGAGCGAGGACGGGGTGCACCAGACCGACTGTTCTCTGCCCAAA +
Preference number: 5 (lower is better)
Translates to: EFHLPRDPPRTRSLF*SEDGVHQTDCSLPK
Trigger: TTTGGGCAGAGAACAGTCGGTCTGGTGCACCCCGTCCTCGCTGCAGAAGAGGCTGCGAGTCCGAGGTGGGTCTCTCGGAAGGTGAAATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325064.9
ENST00000518547.6
CDS CCA 90 bp GGTGACTTGGACTGGAAGGCATCCTGGGATATGAATCCTGAGTCATaGGAGGACACGCTGGACAGCCTCACAGGAGCCTGCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GDLDWKASWDMNPES*EDTLDSLTGACWAR
Trigger: CCTGGCCCAGCAGGCTCCTGTGAGGCTGTCCAGCGTGTCCTCCCATGACTCAGGATTCATATCCCAGGATGCCTTCCAGTCCAAGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000522118.1
ENST00000522722.1
ENST00000523179.5
ENST00000523587.5
ENST00000524090.5
CDS CCA 90 bp GCTCAACAGCACTCCTGTTCTGCCCCCGTGAGCACTACATGTCTGTaGGGCCAGGGGGCTATTGACTTGCTTGGGTCCCACTCTGACCCT +
Preference number: 5 (lower is better)
Translates to: AQQHSCSAPVSTTCL*GQGAIDLLGSHSDP
Trigger: AGGGTCAGAGTGGGACCCAAGCAAGTCAATAGCCCCCTGGCCCCACAGACATGTAGTGCTCACGGGGGCAGAACAGGAGTGCTGTTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520771.1
CDS CCA 90 bp TCAGGTCTGCAGGGTCACTCTCTGGAATCTGGCCTGGGGAGACAGTaGCACTTGGGGGTTCCCGTTCCTGGTCTTCAGCTTCACTTTCTG +
Preference number: 5 (lower is better)
Translates to: SGLQGHSLESGLGRQ*HLGVPVPGLQLHFL
Trigger: CAGAAAGTGAAGCTGAAGACCAGGAACGGGAACCCCCAAGTGCCACTGTCTCCCCAGGCCAGATTCCAGAGAGTGACCCTGCAGACCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CCA 90 bp CCTTCGGATGGCGTTCAGCATGTCTTCTCCTTGTGGAGTATCCCTTaGGCTCAGGTCTGCAGGGTCACTCTCTGGAATCTGGCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: PSDGVQHVFSLWSIP*AQVCRVTLWNLAWG
Trigger: TCCCCAGGCCAGATTCCAGAGAGTGACCCTGCAGACCTGAGCCCAAGGGATACTCCACAAGGAGAAGACATGCTGAACGCCATCCGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS TCA 90 bp AGGATTCTGTGCACCTCTAAGACCTCGCCTGGGTATCACCTAGACTaGGCAGCATTTCCCATGCTCTGCCTCCAAGGGACCCGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: RILCTSKTSPGYHLD*AAFPMLCLQGTRLS
Trigger: AGAGAGGCGGGTCCCTTGGAGGCAGAGCATGGGAAATGCTGCTCAGTCTAGGTGATACCCAGGCGAGGTCTTAGAGGTGCACAGAATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519671.1
CDS GCA 90 bp ACTTGGGGGTTCCCGTTCCTGGTCTTCAGCTTCACTTTCTGGAATTaGCTGTCTGTGCTCCTCAGGGATACTGGGCTTCGGGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TWGFPFLVFSFTFWN*LSVLLRDTGLRAWK
Trigger: CTTCCAGGCCCGAAGCCCAGTATCCCTGAGGAGCACAGACAGGCAATTCCAGAAAGTGAAGCTGAAGACCAGGAACGGGAACCCCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CCA 90 bp GGAATCTGGCCTGGGGAGACAGTGGCACTTGGGGGTTCCCGTTCCTaGTCTTCAGCTTCACTTTCTGGAATTGCCTGTCTGTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GIWPGETVALGGSRS*SSASLSGIACLCSS
Trigger: TGAGGAGCACAGACAGGCAATTCCAGAAAGTGAAGCTGAAGACCAGGAACGGGAACCCCCAAGTGCCACTGTCTCCCCAGGCCAGATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CCA 90 bp CCAATCTCCCTGGTCCCACCTCCCAGCTTCTGTACACTCCACTGCTaGGATGGTGCCCTTCTCACAGGATTCTGTGCACCTCTAAGACCT +
Preference number: 5 (lower is better)
Translates to: PISLVPPPSFCTLHC*DGALLTGFCAPLRP
Trigger: AGGTCTTAGAGGTGCACAGAATCCTGTGAGAAGGGCACCATCCCAGCAGTGGAGTGTACAGAAGCTGGGAGGTGGGACCAGGGAGATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519671.1
CDS GCA 90 bp TCCCGTTCCTGGTCTTCAGCTTCACTTTCTGGAATTGCCTGTCTGTaGTCCTCAGGGATACTGGGCTTCGGGCCTGGAAGTGGAGGGTTA +
Preference number: 5 (lower is better)
Translates to: SRSWSSASLSGIACL*SSGILGFGPGSGGL
Trigger: TAACCCTCCACTTCCAGGCCCGAAGCCCAGTATCCCTGAGGAGCACAGACAGGCAATTCCAGAAAGTGAAGCTGAAGACCAGGAACGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS GCA 90 bp GATCCAATCTCCCTGGTCCCACCTCCCAGCTTCTGTACACTCCACTaGTGGGATGGTGCCCTTCTCACAGGATTCTGTGCACCTCTAAGA +
Preference number: 5 (lower is better)
Translates to: DPISLVPPPSFCTLH*WDGALLTGFCAPLR
Trigger: TCTTAGAGGTGCACAGAATCCTGTGAGAAGGGCACCATCCCAGCAGTGGAGTGTACAGAAGCTGGGAGGTGGGACCAGGGAGATTGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519671.1
CDS CCA 90 bp GGCTTGGAACATCCGTCGGTAGGACTGGCTGATGTCGCTGTTTCTTaGAATGGTGGAGGACTTGTCGAACTCCTGCTGATCTGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: GLEHPSVGLADVAVS*NGGGLVELLLICLL
Trigger: CAGGAGGCAGATCAGCAGGAGTTCGACAAGTCCTCCACCATTCCAAGAAACAGCGACATCAGCCAGTCCTACCGACGGATGTTCCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CCA 90 bp CAGTTTCACGCCCCTTCGGATGGCGTTCAGCATGTCTTCTCCTTGTaGAGTATCCCTTGGGCTCAGGTCTGCAGGGTCACTCTCTGGAAT +
Preference number: 5 (lower is better)
Translates to: QFHAPSDGVQHVFSL*SIPWAQVCRVTLWN
Trigger: ATTCCAGAGAGTGACCCTGCAGACCTGAGCCCAAGGGATACTCCACAAGGAGAAGACATGCTGAACGCCATCCGAAGGGGCGTGAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS-3UTR CAA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGGTGGGTCCTCCCCCGTaGGGGTCCGGTTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: ASATFSHQDWWAKPQALLVGPPP*GSGSRF
Trigger: GAAGCGAGAACCGGACCCCAACGGGGGAGGACCCAC...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCCATGCATGGGGCTGGTaGTGGGTGCTGTGTGCAGTC +
Preference number: 5 (lower is better)
Translates to: TINEKLKWEILRLPRGSSHAWGW*WVLCAV
Trigger: GACTGCACACAGCACCCACAACCAGCCCCATGCATG...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS TCA 90 bp TTGAGGCTGGACGCTTGGCTTGGAACATCCGTCGGTAGGACTGGCTaGTGTCGCTGTTTCTTGGAATGGTGGAGGACTTGTCGAACTCCT +
Preference number: 5 (lower is better)
Translates to: LRLDAWLGTSVGRTG*CRCFLEWWRTCRTP
Trigger: AGGAGTTCGACAAGTCCTCCACCATTCCAAGAAACAGCGACATCAGCCAGTCCTACCGACGGATGTTCCAAGCCAAGCGTCCAGCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS TCA 90 bp AGTACTGCCTGCACGTGGAGTAAAAGCTGGTCACAAGCACATGCATaGCCCAGATGTGGTGCCAAGGGAACCGAACCCACAGCCACCATT +
Preference number: 5 (lower is better)
Translates to: STACTWSKSWSQAHA*PRCGAKGTEPTATI
Trigger: AATGGTGGCTGTGGGTTCGGTTCCCTTGGCACCACATCTGGGTCATGCATGTGCTTGTGACCAGCTTTTACTCCACGTGCAGGCAGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529463.5
CDS CCA 90 bp AGCGATCGTTTGTCGTGGTCTTCTTCAGTTTCACGCCCCTTCGGATaGCGTTCAGCATGTCTTCTCCTTGTGGAGTATCCCTTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: SDRLSWSSSVSRPFG*RSACLLLVEYPLGS
Trigger: TGAGCCCAAGGGATACTCCACAAGGAGAAGACATGCTGAACGCCATCCGAAGGGGCGTGAAACTGAAGAAGACCACGACAAACGATCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS-3UTR CAA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGCCGTTAGACAACTGGTaGGGGGCCTCTGGCGGCATG +
Preference number: 5 (lower is better)
Translates to: ASATFSHQDWWAKPQALLPLDNW*GASGGM
Trigger: CATGCCGCCAGAGGCCCCCAACCAGTTGTCTAACGG...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR CAA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGCATGCTGGTGACACCTaGGGGGCCCTCACCCACAGA +
Preference number: 5 (lower is better)
Translates to: ASATFSHQDWWAKPQALLHAGDT*GALTHR
Trigger: TCTGTGGGTGAGGGCCCCCAAGGTGTCACCAGCATG...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTCGGCGTCCGGATCTGTaGCTCGCAGCTGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCRRPDL*LAAAAA
Trigger: GGCGGCCGCAGCTGCGAGCAACAGATCCGGACGCCG...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR CAA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGGTTGAGGCTGGACGCTaGGCTTGGAACATCCGTCGG +
Preference number: 5 (lower is better)
Translates to: ASATFSHQDWWAKPQALLVEAGR*AWNIRR
Trigger: CCGACGGATGTTCCAAGCCAAGCGTCCAGCCTCAAC...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGCATGCATGGGGCTGGTaGTGGGTGCTGTGTGCAGTC +
Preference number: 5 (lower is better)
Translates to: ASATFSHQDWWAKPQALLHAWGW*WVLCAV
Trigger: GACTGCACACAGCACCCACAACCAGCCCCATGCATG...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS TCA 90 bp TTTCAAGTCCAGAATCACCTAAGGGGACAGAGCCAGCTGGGTGAATaGGGTGCTGAGAGGGGAAGCGTTAGCCATCAAAGCTTAACATCC +
Preference number: 5 (lower is better)
Translates to: FQVQNHLRGQSQLGE*GAERGSVSHQSLTS
Trigger: GGATGTTAAGCTTTGATGGCTAACGCTTCCCCTCTCAGCACCTCATTCACCCAGCTGGCTCTGTCCCCTTAGGTGATTCTGGACTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519226.1
CDS GCA 90 bp ATTAAAGCGCTCGAAAACTGCCTCAGCTTGGCTTCAATGCTTCTGTaGCTCATGCACATCCTGGTGAGAGCAGATCCAATCTCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: IKALENCLSLASMLL*LMHILVRADPISLV
Trigger: GACCAGGGAGATTGGATCTGCTCTCACCAGGATGTGCATGAGGCACAGAAGCATTGAAGCCAAGCTGAGGCAGTTTTCGAGCGCTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519671.1
ENST00000522162.1
ENST00000529463.5
CDS-3UTR CAA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCGAATCACCTGTTCACTaGAGGAGGGCAGTTTGTGAG +
Preference number: 5 (lower is better)
Translates to: TINEKLKWEILRLPRGSSESPVH*RRAVCE
Trigger: CTCACAAACTGCCCTCCTCAAGTGAACAGGTGATTC...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGTGGGTCCTCCCCCGTaGGGGTCCGGTTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLVGPPP*GSGSRF
Trigger: GAAGCGAGAACCGGACCCCAACGGGGGAGGACCCAC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGTGGGTCCTCCCCCGTaGGGGTCCGGTTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQVGPPP*GSGSRF
Trigger: GAAGCGAGAACCGGACCCCAACGGGGGAGGACCCAC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGTGGGTCCTCCCCCGTaGGGGTCCGGTTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNVGPPP*GSGSRF
Trigger: GAAGCGAGAACCGGACCCCAACGGGGGAGGACCCAC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGCTGGACGAGTTCTGGTaGGGGGCCTCTGGCGGCATG +
Preference number: 5 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWLDEFW*GASGGM
Trigger: CATGCCGCCAGAGGCCCCCAACCAGAACTCGTCCAG...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378017.7
CDS GCA 90 bp AATACGAGTCAGCTCAGCTCTGATAACTTAAGCTGCATCTTCTTGTaGAGCCACCCAAGGGGAAGAGTCCACGTGCAGAATGCAGTTAAC +
Preference number: 5 (lower is better)
Translates to: NTSQLSSDNLSCIFL*SHPRGRVHVQNAVN
Trigger: GTTAACTGCATTCTGCACGTGGACTCTTCCCCTTGGGTGGCTGCACAAGAAGATGCAGCTTAAGTTATCAGAGCTGAGCTGACTCGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472084.2
CDS-3UTR CAA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTTGGGGAGGCCAGCAGTaGAGGCTGGACGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSWGGQQ*RLDAWL
Trigger: AAGCCAAGCGTCCAGCCTCAACTGCTGGCCTCCCCA...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGTGGGGAGGCCAGCAGTaGAGGCTGGACGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRWGGQQ*RLDAWL
Trigger: AAGCCAAGCGTCCAGCCTCAACTGCTGGCCTCCCCA...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTGGGACGGTTGGGGTCTaGACAGGGATCACGGGTGTC +
Preference number: 5 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCGTVGV*TGITGV
Trigger: GACACCCGTGATCCCTGTCAAGACCCCAACCGTCCC...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTGGGAGACAGTGGCACTaGGGGGTTCCCGTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSGRQWH*GVPVPG
Trigger: ACCAGGAACGGGAACCCCCAAGTGCCACTGTCTCCC...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCTGGACGAGTTCTGGTaGGGGGCCTCTGGCGGCATG +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLLDEFW*GASGGM
Trigger: CATGCCGCCAGAGGCCCCCAACCAGAACTCGTCCAG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000519168.5
CDS-3UTR CAA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCAAACAAGCCCCCAGATaGGTAAACACATTGGCAAGT +
Preference number: 5 (lower is better)
Translates to: TINEKLKWEILRLPRGSSKQAPR*VNTLAS
Trigger: ACTTGCCAATGTGTTTACCAATCTGGGGGCTTGTTT...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS TCA 90 bp CTACTGTTGTCCGAAGCTGGGACTGCAGCTTTCCTGCTTTGTTTATaGAATCTTCCCAAACTGGATAGCTCCCTTCAGGGACAGACAATG +
Preference number: 5 (lower is better)
Translates to: LLLSEAGTAAFLLCL*NLPKLDSSLQGQTM
Trigger: CATTGTCTGTCCCTGAAGGGAGCTATCCAGTTTGGGAAGATTTCATAAACAAAGCAGGAAAGCTGCAGTCCCAGCTTCGGACAACAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522162.1
CDS-3UTR CAA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCCGTTAGACAACTGGTaGGGGGCCTCTGGCGGCATG +
Preference number: 5 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNPLDNW*GASGGM
Trigger: CATGCCGCCAGAGGCCCCCAACCAGTTGTCTAACGG...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325064.9
ENST00000518547.6
CDS-3UTR CAA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGGTTCTCGCTTCTCTTaGCGGCGCTGCAGGGTGTTC +
Preference number: 5 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWGSRFS*RRCRVF
Trigger: GAACACCCTGCAGCGCCGCAAAGAGAAGCGAGAACC...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGGGTTCTCGCTTCTCTTaGCGGCGCTGCAGGGTGTTC +
Preference number: 5 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRGSRFS*RRCRVF
Trigger: GAACACCCTGCAGCGCCGCAAAGAGAAGCGAGAACC...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACGGCTGGACGCTTGGCTaGGAACATCCGTCGGTAGGA +
Preference number: 5 (lower is better)
Translates to: TALPFWMYLDSIKVSTINGWTLG*EHPSVG
Trigger: TCCTACCGACGGATGTTCCAAGCCAAGCGTCCAGCC...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTGGGGAGGCCAGCAGTaGAGGCTGGACGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAWGGQQ*RLDAWL
Trigger: AAGCCAAGCGTCCAGCCTCAACTGCTGGCCTCCCCA...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATTGGGGAGGCCAGCAGTaGAGGCTGGACGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNWGGQQ*RLDAWL
Trigger: AAGCCAAGCGTCCAGCCTCAACTGCTGGCCTCCCCA...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGGGATCACGGGTGTCTaGATGGGGATGGGACCAGCT +
Preference number: 5 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWGITGV*MGMGPA
Trigger: AGCTGGTCCCATCCCCATCAAGACACCCGTGATCCC...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGGGACGGTTGGGGTCTaGACAGGGATCACGGGTGTC +
Preference number: 5 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQGTVGV*TGITGV
Trigger: GACACCCGTGATCCCTGTCAAGACCCCAACCGTCCC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCGGGACGGTTGGGGTCTaGACAGGGATCACGGGTGTC +
Preference number: 5 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFGTVGV*TGITGV
Trigger: GACACCCGTGATCCCTGTCAAGACCCCAACCGTCCC...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCATGCTGGTGACACCTaGGGGGCCCTCACCCACAGA +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLHAGDT*GALTHR
Trigger: TCTGTGGGTGAGGGCCCCCAAGGTGTCACCAGCATG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCCATGCTGGTGACACCTaGGGGGCCCTCACCCACAGA +
Preference number: 5 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAHAGDT*GALTHR
Trigger: TCTGTGGGTGAGGGCCCCCAAGGTGTCACCAGCATG...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAACATGCTGGTGACACCTaGGGGGCCCTCACCCACAGA +
Preference number: 5 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQHAGDT*GALTHR
Trigger: TCTGTGGGTGAGGGCCCCCAAGGTGTCACCAGCATG...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGGGAGACAGTGGCACTaGGGGGTTCCCGTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNGRQWH*GVPVPG
Trigger: ACCAGGAACGGGAACCCCCAAGTGCCACTGTCTCCC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGGGAGACAGTGGCACTaGGGGGTTCCCGTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFGRQWH*GVPVPG
Trigger: ACCAGGAACGGGAACCCCCAAGTGCCACTGTCTCCC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGGGAGACAGTGGCACTaGGGGGTTCCCGTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQGRQWH*GVPVPG
Trigger: ACCAGGAACGGGAACCCCCAAGTGCCACTGTCTCCC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS TCA 90 bp AATAAGAGATACTTATCATTGACATCTTGGAGAGCACTGTCCAACTaGGGCTGGATATCACCTCTCCCTTCTCACACTGCACAACCCCCA +
Preference number: 5 (lower is better)
Translates to: NKRYLSLTSWRALSN*GWISPLPSHTAQPP
Trigger: TGGGGGTTGTGCAGTGTGAGAAGGGAGAGGTGATATCCAGCCTCAGTTGGACAGTGCTCTCCAAGATGTCAATGATAAGTATCTCTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431961.6
ENST00000522118.1
CDS TCA 90 bp ACCAAAGGCACAGCTCAAGGTTCAACAACCAGCACGTCATTAAAGTaGTCAAAGAACCCATCAAGCCAACTCGTGCAGAAACAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: TKGTAQGSTTSTSLK*SKNPSSQLVQKQWF
Trigger: GAACCACTGTTTCTGCACGAGTTGGCTTGATGGGTTCTTTGATCACTTTAATGACGTGCTGGTTGTTGAACCTTGAGCTGTGCCTTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472084.2
CDS GCA 90 bp CCACAAGGAAACAAGGAAAACCCACGTAAGGAGGAAAACGCAAATTaGAACCAAAGGCACAGCTCAAGGTTCAACAACCAGCACGTCATT +
Preference number: 5 (lower is better)
Translates to: PQGNKENPRKEENAN*NQRHSSRFNNQHVI
Trigger: AATGACGTGCTGGTTGTTGAACCTTGAGCTGTGCCTTTGGTTGCAATTTGCGTTTTCCTCCTTACGTGGGTTTTCCTTGTTTCCTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472084.2
CDS-3UTR CAA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCAAGAGATACTTATCATaGACATCTTGGAGAGCACTG +
Preference number: 5 (lower is better)
Translates to: TINEKLKWEILRLPRGSSKRYLS*TSWRAL
Trigger: CAGTGCTCTCCAAGATGTCAATGATAAGTATCTCTT...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATGGTTCTCGCTTCTCTTaGCGGCGCTGCAGGGTGTTC +
Preference number: 5 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNGSRFS*RRCRVF
Trigger: GAACACCCTGCAGCGCCGCAAAGAGAAGCGAGAACC...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGGTTCTCGCTTCTCTTaGCGGCGCTGCAGGGTGTTC +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLGSRFS*RRCRVF
Trigger: GAACACCCTGCAGCGCCGCAAAGAGAAGCGAGAACC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGGCTGGACGCTTGGCTaGGAACATCCGTCGGTAGGA +
Preference number: 5 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQGWTLG*EHPSVG
Trigger: TCCTACCGACGGATGTTCCAAGCCAAGCGTCCAGCC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGGCTGGACGCTTGGCTaGGAACATCCGTCGGTAGGA +
Preference number: 5 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFGWTLG*EHPSVG
Trigger: TCCTACCGACGGATGTTCCAAGCCAAGCGTCCAGCC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGGCTGGACGCTTGGCTaGGAACATCCGTCGGTAGGA +
Preference number: 5 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAGWTLG*EHPSVG
Trigger: TCCTACCGACGGATGTTCCAAGCCAAGCGTCCAGCC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGTTGAGGCTGGACGCTaGGCTTGGAACATCCGTCGG +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLVEAGR*AWNIRR
Trigger: CCGACGGATGTTCCAAGCCAAGCGTCCAGCCTCAAC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGGGATCACGGGTGTCTaGATGGGGATGGGACCAGCT +
Preference number: 5 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAGITGV*MGMGPA
Trigger: AGCTGGTCCCATCCCCATCAAGACACCCGTGATCCC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGGGATCACGGGTGTCTaGATGGGGATGGGACCAGCT +
Preference number: 5 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQGITGV*MGMGPA
Trigger: AGCTGGTCCCATCCCCATCAAGACACCCGTGATCCC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGCTTGTGGAGTATCCCTaGGGCTCAGGTCTGCAGGGT +
Preference number: 5 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRLVEYP*GSGLQG
Trigger: ACCCTGCAGACCTGAGCCCAAGGGATACTCCACAAG...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ACAATCAACGAGAAACTGAAGTGGGAGATTCTACGACTGCCCAGAGGCAGCAGCCCCTTTTGGATGTATTaGGATTCCATAAAGGTGAGT +
Preference number: 5 (lower is better)
Translates to: TINEKLKWEILRLPRGSSPFWMY*DSIKVS
Trigger: ACTCACCTTTATGGAATCCAAATACATCCAAAAGGG...GCTGCTGCCTCTGGGCAGTCGTAGAATCTCCCACTTCAGTTTCTCGTTGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp GCATCAGCTACTTTTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGCGTAGGCTGAAGCAATaGTTACAATGTAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: ASATFSHQDWWAKPQALLRRLKQ*LQCRRE
Trigger: CTCCCTCCTACATTGTAACAATTGCTTCAGCCTACG...CAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAAAAGTAGCTGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS CCA 90 bp GCAGTTTGTGAGGGTCCATGGTCAGGCTTTTTAGATCTTCCGAGATaGTCTGAAGGTGGGTTATTTCCCCTAGCATTGAGATTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: AVCEGPWSGFLDLPR*SEGGLFPLALRFLL
Trigger: AAGAAGAAATCTCAATGCTAGGGGAAATAACCCACCTTCAGACCATCTCGGAAGATCTAAAAAGCCTGACCATGGACCCTCACAAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000522118.1
ENST00000523179.5
ENST00000524090.5
CDS-3UTR CAA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTCTGCTGCTACTACTGTaGTCCGAAGCTGGGACTGCA +
Preference number: 5 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCLLLLL*SEAGTA
Trigger: TGCAGTCCCAGCTTCGGACAACAGTAGTAGCAGCAG...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCCGGGAGTCACTGCTGTaGACACTGTTCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVARESLL*TLFRLL
Trigger: CAGCAGCCTGAACAGTGTCAACAGCAGTGACTCCCG...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGCGGGAGTCACTGCTGTaGACACTGTTCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMRESLL*TLFRLL
Trigger: CAGCAGCCTGAACAGTGTCAACAGCAGTGACTCCCG...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCGGGAGTCACTGCTGTaGACACTGTTCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLRESLL*TLFRLL
Trigger: CAGCAGCCTGAACAGTGTCAACAGCAGTGACTCCCG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTCTTGTGGAGTATCCCTaGGGCTCAGGTCTGCAGGGT +
Preference number: 5 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFLVEYP*GSGLQG
Trigger: ACCCTGCAGACCTGAGCCCAAGGGATACTCCACAAG...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCCTTGTGGAGTATCCCTaGGGCTCAGGTCTGCAGGGT +
Preference number: 5 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVALVEYP*GSGLQG
Trigger: ACCCTGCAGACCTGAGCCCAAGGGATACTCCACAAG...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCTGCTGCTACTACTGTaGTCCGAAGCTGGGACTGCA +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLLLLLL*SEAGTA
Trigger: TGCAGTCCCAGCTTCGGACAACAGTAGTAGCAGCAG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGAAAACTGCCTCAGCTaGGCTTCAATGCTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAENCLS*ASMLLC
Trigger: GCACAGAAGCATTGAAGCCAAGCTGAGGCAGTTTTC...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACCAGCATGTCTTCTCCTaGTGGAGTATCCCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: TALPFWMYLDSIKVSTINQHVFS*WSIPWA
Trigger: AGCCCAAGGGATACTCCACAAGGAGAAGACATGCTG...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ACACTGCTTTTACAATATGCAAAAACACAAGCAGAACTACCCAAGGTGTGTTGTACAGGATCGGCTATGTaGACGATGTACCCCTCCCAT +
Preference number: 5 (lower is better)
Translates to: TLLLQYAKTQAELPKVCCTGSAM*TMYPSH
Trigger: ATGGGAGGGGTACATCGTCAACATAGCCGATCCTGT...ACAACACACCTTGGGTAGTTCTGCTTGTGTTTTTGCATATTGTAAAAGCAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTGAAAACTGCCTCAGCTaGGCTTCAATGCTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSENCLS*ASMLLC
Trigger: GCACAGAAGCATTGAAGCCAAGCTGAGGCAGTTTTC...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCAGCATGTCTTCTCCTaGTGGAGTATCCCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLQHVFS*WSIPWA
Trigger: AGCCCAAGGGATACTCCACAAGGAGAAGACATGCTG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAACAGCATGTCTTCTCCTaGTGGAGTATCCCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQQHVFS*WSIPWA
Trigger: AGCCCAAGGGATACTCCACAAGGAGAAGACATGCTG...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCCAGCATGTCTTCTCCTaGTGGAGTATCCCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAQHVFS*WSIPWA
Trigger: AGCCCAAGGGATACTCCACAAGGAGAAGACATGCTG...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGGGCTGAGCGATCGTTaGTCGTGGTCTTCTTCAGTT +
Preference number: 5 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFGLSDR*SWSSSV
Trigger: AACTGAAGAAGACCACGACAAACGATCGCTCAGCCC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGGGCTGAGCGATCGTTaGTCGTGGTCTTCTTCAGTT +
Preference number: 5 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQGLSDR*SWSSSV
Trigger: AACTGAAGAAGACCACGACAAACGATCGCTCAGCCC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCGGGCTGAGCGATCGTTaGTCGTGGTCTTCTTCAGTT +
Preference number: 5 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAGLSDR*SWSSSV
Trigger: AACTGAAGAAGACCACGACAAACGATCGCTCAGCCC...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGGGCTGAGCGATCGTTaGTCGTGGTCTTCTTCAGTT +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLGLSDR*SWSSSV
Trigger: AACTGAAGAAGACCACGACAAACGATCGCTCAGCCC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATACAGGATCGGCTATGTaGACGATGTACCCCTCCCAT +
Preference number: 5 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNTGSAM*TMYPSH
Trigger: ATGGGAGGGGTACATCGTCAACATAGCCGATCCTGT...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAACTCCTCCTCTGCCTaGAGAGGGTTCGGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQNSSSA*RGFGQK
Trigger: TTTCTGACCGAACCCTCTCAAGGCAGAGGAGGAGTT...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGAACTCCTCCTCTGCCTaGAGAGGGTTCGGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMNSSSA*RGFGQK
Trigger: TTTCTGACCGAACCCTCTCAAGGCAGAGGAGGAGTT...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCACGGCAAAGCCCATCTaGATGCAGAGAAAATCGCCC +
Preference number: 5 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVATAKPI*MQRKSP
Trigger: GGGCGATTTTCTCTGCATCAAGATGGGCTTTGCCGT...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR CAA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGAAAACTGCCTCAGCTaGGCTTCAATGCTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFENCLS*ASMLLC
Trigger: GCACAGAAGCATTGAAGCCAAGCTGAGGCAGTTTTC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGAATCACCTGTTCACTaGAGGAGGGCAGTTTGTGAG +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLESPVH*RRAVCE
Trigger: CTCACAAACTGCCCTCCTCAAGTGAACAGGTGATTC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCGAATCACCTGTTCACTaGAGGAGGGCAGTTTGTGAG +
Preference number: 5 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFESPVH*RRAVCE
Trigger: CTCACAAACTGCCCTCCTCAAGTGAACAGGTGATTC...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAACTTCACTTTCTGGAATaGCCTGTCTGTGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQLHFLE*PVCAPQ
Trigger: CTGAGGAGCACAGACAGGCAATTCCAGAAAGTGAAG...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTCTTCACTTTCTGGAATaGCCTGTCTGTGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFLHFLE*PVCAPQ
Trigger: CTGAGGAGCACAGACAGGCAATTCCAGAAAGTGAAG...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCTTCACTTTCTGGAATaGCCTGTCTGTGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLLHFLE*PVCAPQ
Trigger: CTGAGGAGCACAGACAGGCAATTCCAGAAAGTGAAG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACCCAAGCTGGCTACCCTaGTCAAATCTGTTCGAGTTT +
Preference number: 5 (lower is better)
Translates to: TALPFWMYLDSIKVSTINPSWLP*SNLFEF
Trigger: AAACTCGAACAGATTTGACAAGGGTAGCCAGCTTGG...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTAAACACATTGGCAAGTaGCTAGACTCCAAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSKHIGK*LDSKLA
Trigger: AGCCAGCTTGGAGTCTAGCAACTTGCCAATGTGTTT...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGAAACACATTGGCAAGTaGCTAGACTCCAAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWKHIGK*LDSKLA
Trigger: AGCCAGCTTGGAGTCTAGCAACTTGCCAATGTGTTT...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TCTTCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGATCTACAAATCTCTGTaGGCTTTAGGGGATGGGCAG +
Preference number: 5 (lower is better)
Translates to: SSNVIPLNLQISVGFRGWIYKSL*ALGDGQ
Trigger: CTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT...CCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCCCAAGCTGGCTACCCTaGTCAAATCTGTTCGAGTTT +
Preference number: 5 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAPSWLP*SNLFEF
Trigger: AAACTCGAACAGATTTGACAAGGGTAGCCAGCTTGG...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATATCTACAAATCTCTGTaGGCTTTAGGGGATGGGCAG +
Preference number: 5 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNIYKSL*ALGDGQ
Trigger: CTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCCGTAGGCTGAAGCAATaGTTACAATGTAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVARRLKQ*LQCRRE
Trigger: CTCCCTCCTACATTGTAACAATTGCTTCAGCCTACG...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCATGCAGCTTTCCTGCTTaGTTTATGAAATCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: SNVIPLNLQISVGFRGWACSFPA*FMKSSQ
Trigger: TTGGGAAGATTTCATAAACAAAGCAGGAAAGCTGCA...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTCTTATCATTGACATCTaGGAGAGCACTGTCCAACTG +
Preference number: 5 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFLIIDI*ESTVQL
Trigger: CAGTTGGACAGTGCTCTCCAAGATGTCAATGATAAG...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTATCATTGACATCTaGGAGAGCACTGTCCAACTG +
Preference number: 5 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNLIIDI*ESTVQL
Trigger: CAGTTGGACAGTGCTCTCCAAGATGTCAATGATAAG...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGCTTATCATTGACATCTaGGAGAGCACTGTCCAACTG +
Preference number: 5 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMLIIDI*ESTVQL
Trigger: CAGTTGGACAGTGCTCTCCAAGATGTCAATGATAAG...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACCCACGTGGGACTCACTaGATAAACTATAGTGAGAAA +
Preference number: 5 (lower is better)
Translates to: TALPFWMYLDSIKVSTINPRGTH*INYSEK
Trigger: TTTCTCACTATAGTTTATCAAGTGAGTCCCACGTGG...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTAAACAAGCCCCCAGATaGGTAAACACATTGGCAAGT +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLKQAPR*VNTLAS
Trigger: ACTTGCCAATGTGTTTACCAATCTGGGGGCTTGTTT...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TCAAATGTGATCCCTTTAAATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCACCACAGGCACTACTGTaGTTTATATTCTGTAAAAGG +
Preference number: 5 (lower is better)
Translates to: SNVIPLNLQISVGFRGWAPQALL*FIFCKR
Trigger: CCTTTTACAGAATATAAACAACAGTAGTGCCTGTGG...TGCCCATCCCCTAAAGCCAACAGAGATTTGTAGATTTAAAGGGATCACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCCACGTGGGACTCACTaGATAAACTATAGTGAGAAA +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLPRGTH*INYSEK
Trigger: TTTCTCACTATAGTTTATCAAGTGAGTCCCACGTGG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp TTAGTCATCAAGATTGGTGGGCTAAACCACAGGCACTACTGTTGTTTATATTCTAACTGCCTTACCCTTTaGGATGTATTTGGATTCCAT +
Preference number: 5 (lower is better)
Translates to: LVIKIGGLNHRHYCCLYSNCLTL*DVFGFH
Trigger: ATGGAATCCAAATACATCCAAAAGGGTAAGGCAGTT...AGAATATAAACAACAGTAGTGCCTGTGGTTTAGCCCACCAATCTTGATGACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ACGGTACGTTACTCTCACATCCAATGCAGTTATGTGTTAAAGCATAAGATTAGGTCTATTGTGATTACCTaGCAGCGATTTCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: TVRYSHIQCSYVLKHKIRSIVIT*QRFLLL
Trigger: CAAAAGCAGAAATCGCTGCAAGGTAATCACAATAGA...CCTAATCTTATGCTTTAACACATAACTGCATTGGATGTGAGAGTAACGTACCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATTGCAGCTTTCCTGCTTaGTTTATGAAATCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: SKGVEYFQKSYIPSCLQNCSFPA*FMKSSQ
Trigger: TTGGGAAGATTTCATAAACAAAGCAGGAAAGCTGCA...ATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGCAGCTTTCCTGCTTaGTTTATGAAATCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLCSFPA*FMKSSQ
Trigger: TTGGGAAGATTTCATAAACAAAGCAGGAAAGCTGCA...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTTTCTTCCATCTGTTCTaGAAGTGGGTTTATCAGACA +
Preference number: 5 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFFFHLF*KWVYQT
Trigger: TGTCTGATAAACCCACTTCAAGAACAGATGGAAGAA...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTTCTTCCATCTGTTCTaGAAGTGGGTTTATCAGACA +
Preference number: 5 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVAFFHLF*KWVYQT
Trigger: TGTCTGATAAACCCACTTCAAGAACAGATGGAAGAA...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGTTCTTCCATCTGTTCTaGAAGTGGGTTTATCAGACA +
Preference number: 5 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMFFHLF*KWVYQT
Trigger: TGTCTGATAAACCCACTTCAAGAACAGATGGAAGAA...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAAGAGATACTTATCATaGACATCTTGGAGAGCACTG +
Preference number: 5 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQKRYLS*TSWRAL
Trigger: CAGTGCTCTCCAAGATGTCAATGATAAGTATCTCTT...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTAAGAGATACTTATCATaGACATCTTGGAGAGCACTG +
Preference number: 5 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFKRYLS*TSWRAL
Trigger: CAGTGCTCTCCAAGATGTCAATGATAAGTATCTCTT...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ACTGCCTTACCCTTTTGGATGTATTTGGATTCCATAAAGGTGAGTACAATCAACGAGCTATATTCCGAGTaGCCTACAAAATCTTTTGTT +
Preference number: 5 (lower is better)
Translates to: TALPFWMYLDSIKVSTINELYSE*PTKSFV
Trigger: AACAAAAGATTTTGTAGGCAACTCGGAATATAGCTC...GTTGATTGTACTCACCTTTATGGAATCCAAATACATCCAAAAGGGTAAGGCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAACTGCCTTACCCTTTaGGATGTATTTGGATTCCAT +
Preference number: 5 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQNCLTL*DVFGFH
Trigger: ATGGAATCCAAATACATCCAAAAGGGTAAGGCAGTT...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCCACAGGCACTACTGTaGTTTATATTCTGTAAAAGG +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLPQALL*FIFCKR
Trigger: CCTTTTACAGAATATAAACAACAGTAGTGCCTGTGG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTCTATTGTGATTACCTaGCAGCGATTTCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVASIVIT*QRFLLL
Trigger: CAAAAGCAGAAATCGCTGCAAGGTAATCACAATAGA...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AATTCTTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCACTACCCAAGGTGTGTaGTCACATTCTTTCTACATT +
Preference number: 5 (lower is better)
Translates to: NSYLKVSSTFKRAIFRVATTQGV*SHSFYI
Trigger: AATGTAGAAAGAATGTGACAACACACCTTGGGTAGT...GGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCACTACCCAAGGTGTGTaGTCACATTCTTTCTACATT +
Preference number: 5 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFTTQGV*SHSFYI
Trigger: AATGTAGAAAGAATGTGACAACACACCTTGGGTAGT...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTCTTTCTTATATTCTTTaGCGTGGTCTTTATCCAGCT +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLLSYIL*RGLYPA
Trigger: AGCTGGATAAAGACCACGCAAAAGAATATAAGAAAG...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ATATATAGAACAATGACCATACGGTACGTTACTCTCACATCCAATGCAGTTATGCTTTCTTATATTCTTTaGCGTGGTCTTTATCCAGCT +
Preference number: 5 (lower is better)
Translates to: IYRTMTIRYVTLTSNAVMLSYIL*RGLYPA
Trigger: AGCTGGATAAAGACCACGCAAAAGAATATAAGAAAG...CATAACTGCATTGGATGTGAGAGTAACGTACCGTATGGTCATTGTTCTATATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp ATCTACAAATCTCTGTTGGCTTTAGGGGATGGGCAGTATAACAAATTTAACTTCCTTTCTTATATTCTTTaGCGTGGTCTTTATCCAGCT +
Preference number: 5 (lower is better)
Translates to: IYKSLLALGDGQYNKFNFLSYIL*RGLYPA
Trigger: AGCTGGATAAAGACCACGCAAAAGAATATAAGAAAG...GAAGTTAAATTTGTTATACTGCCCATCCCCTAAAGCCAACAGAGATTTGTAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378017.7
ENST00000518547.6
CDS-3UTR CAA 90 bp TTATCTAAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAGAGCTATATTCCGAGTaGCCTACAAAATCTTTTGTT +
Preference number: 5 (lower is better)
Translates to: LSKGVEYFQKSYIPSCLQELYSE*PTKSFV
Trigger: AACAAAAGATTTTGTAGGCAACTCGGAATATAGCTC...TTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTTAGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AAAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTGAGCTATATTCCGAGTaGCCTACAAAATCTTTTGTT +
Preference number: 5 (lower is better)
Translates to: KGVEYFQKSYIPSCLQNLELYSE*PTKSFV
Trigger: AACAAAAGATTTTGTAGGCAACTCGGAATATAGCTC...AAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS-3UTR CAA 90 bp AAGGTGTCGAGTACTTTCAAAAGAGCTATATTCCGAGTTGCCTACAAAATCTTTGAGCTATATTCCGAGTaGCCTACAAAATCTTTTGTT +
Preference number: 5 (lower is better)
Translates to: KVSSTFKRAIFRVAYKIFELYSE*PTKSFV
Trigger: AACAAAAGATTTTGTAGGCAACTCGGAATATAGCTC...AAAGATTTTGTAGGCAACTCGGAATATAGCTCTTTTGAAAGTACTCGACACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
CDS GCA 72 bp GGTCAGCTCGCGGCGTCCGGATCTGTTGCTCGCAGCTaGGGCCGCCGCCTCCTTTTCACTCCTGCGCGCCCG +
Preference number: 6 (lower is better)
Translates to: GQLAASGSVARS*GRRLLFTPARP
Trigger: CGGGCGCGCAGGAGTGAAAAGGAGGCGGCGGCCGCAGCTGCGAGCAACAGATCCGGACGCCGCGAGCTGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS CAA 72 bp GCAGGTGGGCCGCTGGCGGTAGTGGGTCCTCCCCCGTaGGGGTCCGGTTCTCGCTTCTCTTTGCGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: AGGPLAVVGPPP*GSGSRFSLRRC
Trigger: GCAGCGCCGCAAAGAGAAGCGAGAACCGGACCCCAACGGGGGAGGACCCACTACCGCCAGCGGCCCACCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
ENST00000520094.1
ENST00000520771.1
ENST00000523179.5
ENST00000523587.5
ENST00000524090.5
CDS CAA 72 bp GCAGGTGGGCCGCTGGCGGTAGTGGGTCCTCCCCCGTaGGGGTCCGGTTCTCGCTTCTCTTTGCGGCGCTGG +
Preference number: 6 (lower is better)
Translates to: AGGPLAVVGPPP*GSGSRFSLRRW
Trigger: CCAGCGCCGCAAAGAGAAGCGAGAACCGGACCCCAACGGGGGAGGACCCACTACCGCCAGCGGCCCACCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431961.6
CDS GCA 72 bp CAGCAGAGCGGGTCAGCTCGCGGCGTCCGGATCTGTTaGTCGCAGCTGCGGCCGCCGCCTCCTTTTCACTCC +
Preference number: 6 (lower is better)
Translates to: QQSGSARGVRIC*SQLRPPPPFHS
Trigger: GGAGTGAAAAGGAGGCGGCGGCCGCAGCTGCGAGCAACAGATCCGGACGCCGCGAGCTGACCCGCTCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS CAA 72 bp GCAGGTGGGCCGCTGGCGGTAGTGGGTCCTCCCCCGTaGGGGTCCGGTTCTCGCTTCTCTTTGCGGCGCTTC +
Preference number: 6 (lower is better)
Translates to: AGGPLAVVGPPP*GSGSRFSLRRF
Trigger: GAAGCGCCGCAAAGAGAAGCGAGAACCGGACCCCAACGGGGGAGGACCCACTACCGCCAGCGGCCCACCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522722.1
CDS CAA 90 bp TCAGCTGCTGCAGGTGGGCCGCTGGCGGTAGTGGGTCCTCCCCCGTaGGGGTCCGGTTCTCGCTTCTCTTTGCGGCGCTGCAGGGTGTTC +
Preference number: 6 (lower is better)
Translates to: SAAAGGPLAVVGPPP*GSGSRFSLRRCRVF
Trigger: GAACACCCTGCAGCGCCGCAAAGAGAAGCGAGAACCGGACCCCAACGGGGGAGGACCCACTACCGCCAGCGGCCCACCTGCAGCAGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
ENST00000520094.1
ENST00000520771.1
ENST00000523179.5
ENST00000523587.5
ENST00000524090.5
CDS CAA 90 bp TCAGCTGCTGCAGGTGGGCCGCTGGCGGTAGTGGGTCCTCCCCCGTaGGGGTCCGGTTCTCGCTTCTCTTTGCGGCGCTTCCAGCTAGGG +
Preference number: 6 (lower is better)
Translates to: SAAAGGPLAVVGPPP*GSGSRFSLRRFQLG
Trigger: CCCTAGCTGGAAGCGCCGCAAAGAGAAGCGAGAACCGGACCCCAACGGGGGAGGACCCACTACCGCCAGCGGCCCACCTGCAGCAGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522722.1
CDS GCA 72 bp AGTCATGCTCCGTGGTCTCTGAGCCTCCTCAGCTGCTaGAGGTGGGCCGCTGGCGGTAGTGGGTCCTCCCCC +
Preference number: 6 (lower is better)
Translates to: SHAPWSLSLLSC*RWAAGGSGSSP
Trigger: GGGGGAGGACCCACTACCGCCAGCGGCCCACCTGCAGCAGCTGAGGAGGCTCAGAGACCACGGAGCATGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520094.1
ENST00000520771.1
ENST00000523179.5
ENST00000523587.5
ENST00000524090.5
CDS CCA 72 bp GGGCCAGGTTGGAGCTGCGGTAGCGGTAATGTGAGCTaGGGGAATGCGAGTGGGAGCCGCTGGACCGGGAGT +
Preference number: 6 (lower is better)
Translates to: GPGWSCGSGNVS*GNASGSRWTGS
Trigger: ACTCCCGGTCCAGCGGCTCCCACTCGCATTCCCCCAGCTCACATTACCGCTACCGCAGCTCCAACCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000522118.1
ENST00000522722.1
ENST00000523179.5
ENST00000523587.5
ENST00000524090.5
CDS CAA 72 bp GGTCCTCCCCCGTTGGGGTCCGGTTCTCGCTTCTCTTaGCGGCGCTGCAGGGTGTTCACCAGAGGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: GPPPLGSGSRFS*RRCRVFTRGWS
Trigger: TGACCAGCCTCTGGTGAACACCCTGCAGCGCCGCAAAGAGAAGCGAGAACCGGACCCCAACGGGGGAGGACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
ENST00000520094.1
ENST00000520771.1
ENST00000523179.5
ENST00000523587.5
ENST00000524090.5
CDS GCA 72 bp CTTCCGAGAGACCCACCTCGGACTCGCAGCCTCTTCTaGAGCGAGGACGGGGTGCACCAGACCGACTGTTCT +
Preference number: 6 (lower is better)
Translates to: LPRDPPRTRSLF*SEDGVHQTDCS
Trigger: AGAACAGTCGGTCTGGTGCACCCCGTCCTCGCTGCAGAAGAGGCTGCGAGTCCGAGGTGGGTCTCTCGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325064.9
ENST00000518547.6
CDS GCA 72 bp GTCCTCCCCCGTTGGGGTCCGGTTCTCGCTTCTCTTTaGGGCGCTGCAGGGTGTTCACCAGAGGCTGGTCAT +
Preference number: 6 (lower is better)
Translates to: VLPRWGPVLASL*GAAGCSPEAGH
Trigger: ATGACCAGCCTCTGGTGAACACCCTGCAGCGCCGCAAAGAGAAGCGAGAACCGGACCCCAACGGGGGAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519168.5
ENST00000520094.1
ENST00000520771.1
ENST00000523179.5
ENST00000523587.5
ENST00000524090.5
CDS CCA 72 bp AGGGGCTGGCAACACCCCTGGGAGGTCTGGGACGGTTaGGGTCTTGACAGGGATCACGGGTGTCTTGATGGG +
Preference number: 6 (lower is better)
Translates to: RGWQHPWEVWDG*GLDRDHGCLDG
Trigger: CCCATCAAGACACCCGTGATCCCTGTCAAGACCCCAACCGTCCCAGACCTCCCAGGGGTGTTGCCAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS TCA 72 bp CATAGCAGGTCCCAGGGTGGTGGGGAGGCCAGCAGTTaGGGCTGGACGCTTGGCTTGGAACATCCGTCGGTA +
Preference number: 6 (lower is better)
Translates to: HSRSQGGGEASS*GWTLGLEHPSV
Trigger: TACCGACGGATGTTCCAAGCCAAGCGTCCAGCCTCAACTGCTGGCCTCCCCACCACCCTGGGACCTGCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS TCA 72 bp GCGAGTGGGAGCCGCTGGACCGGGAGTCACTGCTGTTaGCACTGTTCAGGCTGCACCAAAACGAGGGGAGCT +
Preference number: 6 (lower is better)
Translates to: ASGSRWTGSHCC*HCSGCTKTRGA
Trigger: AGCTCCCCTCGTTTTGGTGCAGCCTGAACAGTGTCAACAGCAGTGACTCCCGGTCCAGCGGCTCCCACTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523587.5
CDS GCA 72 bp ATTTCCCATGCTCTGCCTCCAAGGGACCCGCCTCTCTaGCTAAACCAGACCCCTGTGCCCCGTCACACCCGT +
Preference number: 6 (lower is better)
Translates to: ISHALPPRDPPL*LNQTPVPRHTR
Trigger: ACGGGTGTGACGGGGCACAGGGGTCTGGTTTAGGCAGAGAGGCGGGTCCCTTGGAGGCAGAGCATGGGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519671.1
CDS CAA 72 bp TGCGAGTGGGAGCCGCTGGACCGGGAGTCACTGCTGTaGACACTGTTCAGGCTGCACCAAAACGAGGGGAGC +
Preference number: 6 (lower is better)
Translates to: CEWEPLDRESLL*TLFRLHQNEGS
Trigger: GCTCCCCTCGTTTTGGTGCAGCCTGAACAGTGTCAACAGCAGTGACTCCCGGTCCAGCGGCTCCCACTCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523587.5
CDS TCA 72 bp GCGAGTGGGAGCCGCTGGACCGGGAGTCACTGCTGTTaGCACTGTTCAGGCTGCTGCAGACACTGGACTTTC +
Preference number: 6 (lower is better)
Translates to: ASGSRWTGSHCC*HCSGCCRHWTF
Trigger: GAAAGTCCAGTGTCTGCAGCAGCCTGAACAGTGTCAACAGCAGTGACTCCCGGTCCAGCGGCTCCCACTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000522118.1
ENST00000523179.5
ENST00000524090.5
CDS TCA 72 bp AAGTGGAGGGTTAACGGAAGCTTGGCCGCTCCACATTaGGGAGGGCATGCTGGTGACACCTTGGGGGCCCTC +
Preference number: 6 (lower is better)
Translates to: KWRVNGSLAAPH*GGHAGDTLGAL
Trigger: GAGGGCCCCCAAGGTGTCACCAGCATGCCCTCCTCAATGTGGAGCGGCCAAGCTTCCGTTAACCCTCCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS TCA 72 bp CACTGGTGCCCACTACGGAAACGGCAAAGCCCATCTTaGTGCAGAGAAAATCGCCCGCTGACCCGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: HWCPLRKRQSPS*CRENRPLTRGQ
Trigger: CTGGCCCCGGGTCAGCGGGCGATTTTCTCTGCATCAAGATGGGCTTTGCCGTTTCCGTAGTGGGCACCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS TCA 72 bp GCGAGTGGGAGCCGCTGGACCGGGAGTCACTGCTGTTaGCACTGTTCAGGCTGCAATATCTTCAGGGGGCAG +
Preference number: 6 (lower is better)
Translates to: ASGSRWTGSHCC*HCSGCNIFRGQ
Trigger: CTGCCCCCTGAAGATATTGCAGCCTGAACAGTGTCAACAGCAGTGACTCCCGGTCCAGCGGCTCCCACTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522722.1
CDS CCA 72 bp GGCTTCGGGCCTGGAAGTGGAGGGTTAACGGAAGCTTaGCCGCTCCACATTGAGGAGGGCATGCTGGTGACA +
Preference number: 6 (lower is better)
Translates to: GFGPGSGGLTEA*PLHIEEGMLVT
Trigger: TGTCACCAGCATGCCCTCCTCAATGTGGAGCGGCCAAGCTTCCGTTAACCCTCCACTTCCAGGCCCGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CCA 72 bp CTGTCTGTGCTCCTCAGGGATACTGGGCTTCGGGCCTaGAAGTGGAGGGTTAACGGAAGCTTGGCCGCTCCA +
Preference number: 6 (lower is better)
Translates to: LSVLLRDTGLRA*KWRVNGSLAAP
Trigger: TGGAGCGGCCAAGCTTCCGTTAACCCTCCACTTCCAGGCCCGAAGCCCAGTATCCCTGAGGAGCACAGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CCA 72 bp CACTCCTGTTCTGCCCCCGTGAGCACTACATGTCTGTaGGGCCAGGGGGCTATTGACTTGCTTGGGTCCCAC +
Preference number: 6 (lower is better)
Translates to: HSCSAPVSTTCL*GQGAIDLLGSH
Trigger: GTGGGACCCAAGCAAGTCAATAGCCCCCTGGCCCCACAGACATGTAGTGCTCACGGGGGCAGAACAGGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520771.1
CDS CAA 72 bp CCACTGGTGCCCACTACGGAAACGGCAAAGCCCATCTaGATGCAGAGAAAATCGCCCGCTGACCCGGGGCCA +
Preference number: 6 (lower is better)
Translates to: PLVPTTETAKPI*MQRKSPADPGP
Trigger: TGGCCCCGGGTCAGCGGGCGATTTTCTCTGCATCAAGATGGGCTTTGCCGTTTCCGTAGTGGGCACCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518547.6
CDS GCA 72 bp GACAGAAGGCTTGGTGGAAGGGGTCCGTCGGATAGTTaGAACCCCTGGAGTGACCATAGCAGGTCCCAGGGT +
Preference number: 6 (lower is better)
Translates to: DRRLGGRGPSDS*NPWSDHSRSQG
Trigger: ACCCTGGGACCTGCTATGGTCACTCCAGGGGTTGCAACTATCCGACGGACCCCTTCCACCAAGCCTTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CCA 72 bp GGGGCCTCTGGCGGCATGGGGGATGGTGACTTGGACTaGAAGGCATCCTGGGATATGAATCCTGAGTCATGG +
Preference number: 6 (lower is better)
Translates to: GASGGMGDGDLD*KASWDMNPESW
Trigger: CCATGACTCAGGATTCATATCCCAGGATGCCTTCCAGTCCAAGTCACCATCCCCCATGCCGCCAGAGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000522118.1
ENST00000522722.1
ENST00000523179.5
ENST00000523587.5
ENST00000524090.5
CDS CCA 72 bp CATGCCGGGCCCAATGGTGTAATAATGAGCGTAGTCTaGAAGGTGGACAGAGGTGACCCGAGGGAGCAGGCG +
Preference number: 6 (lower is better)
Translates to: HAGPNGVIMSVV*KVDRGDPREQA
Trigger: CGCCTGCTCCCTCGGGTCACCTCTGTCCACCTTCCAGACTACGCTCATTATTACACCATTGGGCCCGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
ENST00000520094.1
ENST00000522118.1
ENST00000522722.1
ENST00000523587.5
ENST00000524090.5
CDS CCA 72 bp CAGGGTCACTCTCTGGAATCTGGCCTGGGGAGACAGTaGCACTTGGGGGTTCCCGTTCCTGGTCTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: QGHSLESGLGRQ*HLGVPVPGLQL
Trigger: AAGCTGAAGACCAGGAACGGGAACCCCCAAGTGCCACTGTCTCCCCAGGCCAGATTCCAGAGAGTGACCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CAA 72 bp TGCGAGTGGGAGCCGCTGGACCGGGAGTCACTGCTGTaGACACTGTTCAGGCTGCTGCAGACACTGGACTTT +
Preference number: 6 (lower is better)
Translates to: CEWEPLDRESLL*TLFRLLQTLDF
Trigger: AAAGTCCAGTGTCTGCAGCAGCCTGAACAGTGTCAACAGCAGTGACTCCCGGTCCAGCGGCTCCCACTCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000522118.1
ENST00000523179.5
ENST00000524090.5
CDS CAA 72 bp CACGCCCCTTCGGATGGCGTTCAGCATGTCTTCTCCTaGTGGAGTATCCCTTGGGCTCAGGTCTGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: HAPSDGVQHVFS*WSIPWAQVCRV
Trigger: GACCCTGCAGACCTGAGCCCAAGGGATACTCCACAAGGAGAAGACATGCTGAACGCCATCCGAAGGGGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CAA 72 bp TGCGAGTGGGAGCCGCTGGACCGGGAGTCACTGCTGTaGACACTGTTCAGGCTGCAATATCTTCAGGGGGCA +
Preference number: 6 (lower is better)
Translates to: CEWEPLDRESLL*TLFRLQYLQGA
Trigger: TGCCCCCTGAAGATATTGCAGCCTGAACAGTGTCAACAGCAGTGACTCCCGGTCCAGCGGCTCCCACTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522722.1
CDS CAA 90 bp CCCTTCGGATGGCGTTCAGCATGTCTTCTCCTTGTGGAGTATCCCTaGGGCTCAGGTCTGCAGGGTCACTCTCTGGAATCTGGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: PFGWRSACLLLVEYP*GSGLQGHSLESGLG
Trigger: CCCCAGGCCAGATTCCAGAGAGTGACCCTGCAGACCTGAGCCCAAGGGATACTCCACAAGGAGAAGACATGCTGAACGCCATCCGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS GCA 72 bp GTCTTCTCCTTGTGGAGTATCCCTTGGGCTCAGGTCTaGAGGGTCACTCTCTGGAATCTGGCCTGGGGAGAC +
Preference number: 6 (lower is better)
Translates to: VFSLWSIPWAQV*RVTLWNLAWGD
Trigger: GTCTCCCCAGGCCAGATTCCAGAGAGTGACCCTGCAGACCTGAGCCCAAGGGATACTCCACAAGGAGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS GCA 72 bp TCCCTGGTCCCACCTCCCAGCTTCTGTACACTCCACTaGTGGGATGGTGCCCTTCTCACAGGATTCTGTGCA +
Preference number: 6 (lower is better)
Translates to: SLVPPPSFCTLH*WDGALLTGFCA
Trigger: TGCACAGAATCCTGTGAGAAGGGCACCATCCCAGCAGTGGAGTGTACAGAAGCTGGGAGGTGGGACCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519671.1
CDS CCA 72 bp GCCCCTTCGGATGGCGTTCAGCATGTCTTCTCCTTGTaGAGTATCCCTTGGGCTCAGGTCTGCAGGGTCACT +
Preference number: 6 (lower is better)
Translates to: APSDGVQHVFSL*SIPWAQVCRVT
Trigger: AGTGACCCTGCAGACCTGAGCCCAAGGGATACTCCACAAGGAGAAGACATGCTGAACGCCATCCGAAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CCA 72 bp CTGGTCCCACCTCCCAGCTTCTGTACACTCCACTGCTaGGATGGTGCCCTTCTCACAGGATTCTGTGCACCT +
Preference number: 6 (lower is better)
Translates to: LVPPPSFCTLHC*DGALLTGFCAP
Trigger: AGGTGCACAGAATCCTGTGAGAAGGGCACCATCCCAGCAGTGGAGTGTACAGAAGCTGGGAGGTGGGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519671.1
CDS CAA 90 bp CTTCAGTTTCACGCCCCTTCGGATGGCGTTCAGCATGTCTTCTCCTaGTGGAGTATCCCTTGGGCTCAGGTCTGCAGGGTCACTCTCTGG +
Preference number: 6 (lower is better)
Translates to: LQFHAPSDGVQHVFS*WSIPWAQVCRVTLW
Trigger: CCAGAGAGTGACCCTGCAGACCTGAGCCCAAGGGATACTCCACAAGGAGAAGACATGCTGAACGCCATCCGAAGGGGCGTGAAACTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS GCA 72 bp GCACTACATGTCTGTGGGGCCAGGGGGCTATTGACTTaGTTGGGTCCCACTCTGACCCTAGAAAGTTCTGCC +
Preference number: 6 (lower is better)
Translates to: ALHVCGARGLLT*LGPTLTLESSA
Trigger: GGCAGAACTTTCTAGGGTCAGAGTGGGACCCAAGCAAGTCAATAGCCCCCTGGCCCCACAGACATGTAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520771.1
CDS CCA 72 bp AGGCAGGCAGGCAATGAGGGAAAAGGCCTGCACCCGTaGGCCCCACGTGGGACTCACTTGATAAACTATAGT +
Preference number: 6 (lower is better)
Translates to: RQAGNEGKGLHP*APRGTHLINYS
Trigger: ACTATAGTTTATCAAGTGAGTCCCACGTGGGGCCCACGGGTGCAGGCCTTTTCCCTCATTGCCTGCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
ENST00000520094.1
ENST00000522118.1
ENST00000522722.1
ENST00000523587.5
ENST00000524090.5
CDS CCA 72 bp CCTGGGGAGACAGTGGCACTTGGGGGTTCCCGTTCCTaGTCTTCAGCTTCACTTTCTGGAATTGCCTGTCTG +
Preference number: 6 (lower is better)
Translates to: PGETVALGGSRS*SSASLSGIACL
Trigger: CAGACAGGCAATTCCAGAAAGTGAAGCTGAAGACCAGGAACGGGAACCCCCAAGTGCCACTGTCTCCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CCA 72 bp CCCAACCAGCTACTGAGAACAAGAGCATCACCCTGGTaGCAGCCGATACAGTCATGCTCCGTGGTCTCTGAG +
Preference number: 6 (lower is better)
Translates to: PNQLLRTRASPW*QPIQSCSVVSE
Trigger: CTCAGAGACCACGGAGCATGACTGTATCGGCTGCCACCAGGGTGATGCTCTTGTTCTCAGTAGCTGGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520771.1
CDS TCA 72 bp CAGAATCACCTAAGGGGACAGAGCCAGCTGGGTGAATaGGGTGCTGAGAGGGGAAGCGTTAGCCATCAAAGC +
Preference number: 6 (lower is better)
Translates to: QNHLRGQSQLGE*GAERGSVSHQS
Trigger: GCTTTGATGGCTAACGCTTCCCCTCTCAGCACCTCATTCACCCAGCTGGCTCTGTCCCCTTAGGTGATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519226.1
CDS CCA 72 bp GGCGTTCAGCATGTCTTCTCCTTGTGGAGTATCCCTTaGGCTCAGGTCTGCAGGGTCACTCTCTGGAATCTG +
Preference number: 6 (lower is better)
Translates to: GVQHVFSLWSIP*AQVCRVTLWNL
Trigger: CAGATTCCAGAGAGTGACCCTGCAGACCTGAGCCCAAGGGATACTCCACAAGGAGAAGACATGCTGAACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CAA 72 bp AGCACTACATGTCTGTGGGGCCAGGGGGCTATTGACTaGCTTGGGTCCCACTCTGACCCTAGAAAGTTCTGC +
Preference number: 6 (lower is better)
Translates to: STTCLWGQGAID*LGSHSDPRKFC
Trigger: GCAGAACTTTCTAGGGTCAGAGTGGGACCCAAGCAAGTCAATAGCCCCCTGGCCCCACAGACATGTAGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520771.1
CDS TCA 72 bp AGGCTTAGCCCAGTCCTTCCAGCTAGGGATCTGAGATaGCGGGAACATGCCGGGCCCAATGGTGTAATAATG +
Preference number: 6 (lower is better)
Translates to: RLSPVLPARDLR*REHAGPNGVIM
Trigger: CATTATTACACCATTGGGCCCGGCATGTTCCCGTCATCTCAGATCCCTAGCTGGAAGGACTGGGCTAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325064.9
ENST00000518547.6
ENST00000519168.5
ENST00000520094.1
ENST00000523587.5
ENST00000524090.5
CDS TCA 72 bp GACGCTTGGCTTGGAACATCCGTCGGTAGGACTGGCTaGTGTCGCTGTTTCTTGGAATGGTGGAGGACTTGT +
Preference number: 6 (lower is better)
Translates to: DAWLGTSVGRTG*CRCFLEWWRTC
Trigger: ACAAGTCCTCCACCATTCCAAGAAACAGCGACATCAGCCAGTCCTACCGACGGATGTTCCAAGCCAAGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS TCA 72 bp CTTCTCTTTGCGGCGCTTCCAGCTAGGGATCTGAGATaGCGGGAACATGCCGGGCCCAATGGTGTAATAATG +
Preference number: 6 (lower is better)
Translates to: LLFAALPARDLR*REHAGPNGVIM
Trigger: CATTATTACACCATTGGGCCCGGCATGTTCCCGTCATCTCAGATCCCTAGCTGGAAGCGCCGCAAAGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522722.1
CDS GCA 72 bp TGGTCTTCAGCTTCACTTTCTGGAATTGCCTGTCTGTaGTCCTCAGGGATACTGGGCTTCGGGCCTGGAAGT +
Preference number: 6 (lower is better)
Translates to: WSSASLSGIACL*SSGILGFGPGS
Trigger: ACTTCCAGGCCCGAAGCCCAGTATCCCTGAGGAGCACAGACAGGCAATTCCAGAAAGTGAAGCTGAAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS GCA 72 bp TTCCCGTTCCTGGTCTTCAGCTTCACTTTCTGGAATTaGCTGTCTGTGCTCCTCAGGGATACTGGGCTTCGG +
Preference number: 6 (lower is better)
Translates to: FPFLVFSFTFWN*LSVLLRDTGLR
Trigger: CCGAAGCCCAGTATCCCTGAGGAGCACAGACAGGCAATTCCAGAAAGTGAAGCTGAAGACCAGGAACGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS GCA 72 bp TCTTCTTGTGCAGCCACCCAAGGGGAAGAGTCCACGTaGAGAATGCAGTTAACACTGGGAGTCAGCCTCCAT +
Preference number: 6 (lower is better)
Translates to: SSCAATQGEEST*RMQLTLGVSLH
Trigger: ATGGAGGCTGACTCCCAGTGTTAACTGCATTCTGCACGTGGACTCTTCCCCTTGGGTGGCTGCACAAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472084.2
CDS CCA 72 bp CATCCGTCGGTAGGACTGGCTGATGTCGCTGTTTCTTaGAATGGTGGAGGACTTGTCGAACTCCTGCTGATC +
Preference number: 6 (lower is better)
Translates to: HPSVGLADVAVS*NGGGLVELLLI
Trigger: GATCAGCAGGAGTTCGACAAGTCCTCCACCATTCCAAGAAACAGCGACATCAGCCAGTCCTACCGACGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CAA 72 bp GTTCCCGTTCCTGGTCTTCAGCTTCACTTTCTGGAATaGCCTGTCTGTGCTCCTCAGGGATACTGGGCTTCG +
Preference number: 6 (lower is better)
Translates to: VPVPGLQLHFLE*PVCAPQGYWAS
Trigger: CGAAGCCCAGTATCCCTGAGGAGCACAGACAGGCAATTCCAGAAAGTGAAGCTGAAGACCAGGAACGGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CCA 72 bp TTGTCGTGGTCTTCTTCAGTTTCACGCCCCTTCGGATaGCGTTCAGCATGTCTTCTCCTTGTGGAGTATCCC +
Preference number: 6 (lower is better)
Translates to: LSWSSSVSRPFG*RSACLLLVEYP
Trigger: GGGATACTCCACAAGGAGAAGACATGCTGAACGCCATCCGAAGGGGCGTGAAACTGAAGAAGACCACGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CCA 72 bp GCCGCTCCAGGACAAGGAGAGTCATATTGCTTTTTGTaGTCCCATGATAGTGCCACGTGTGTTGGTGGCCAT +
Preference number: 6 (lower is better)
Translates to: AAPGQGESYCFL*SHDSATCVGGH
Trigger: ATGGCCACCAACACACGTGGCACTATCATGGGACCACAAAAAGCAATATGACTCTCCTTGTCCTGGAGCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524243.5
CDS GCA 72 bp CTCGAAAACTGCCTCAGCTTGGCTTCAATGCTTCTGTaGCTCATGCACATCCTGGTGAGAGCAGATCCAATC +
Preference number: 6 (lower is better)
Translates to: LENCLSLASMLL*LMHILVRADPI
Trigger: GATTGGATCTGCTCTCACCAGGATGTGCATGAGGCACAGAAGCATTGAAGCCAAGCTGAGGCAGTTTTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519671.1
ENST00000522162.1
ENST00000529463.5
CDS GCA 72 bp CAGCTCAGCTCTGATAACTTAAGCTGCATCTTCTTGTaGAGCCACCCAAGGGGAAGAGTCCACGTGCAGAAT +
Preference number: 6 (lower is better)
Translates to: QLSSDNLSCIFL*SHPRGRVHVQN
Trigger: ATTCTGCACGTGGACTCTTCCCCTTGGGTGGCTGCACAAGAAGATGCAGCTTAAGTTATCAGAGCTGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472084.2
CDS TCA 72 bp TCCGAAGCTGGGACTGCAGCTTTCCTGCTTTGTTTATaGAATCTTCCCAAACTGGATAGCTCCCTTCAGGGA +
Preference number: 6 (lower is better)
Translates to: SEAGTAAFLLCL*NLPKLDSSLQG
Trigger: TCCCTGAAGGGAGCTATCCAGTTTGGGAAGATTTCATAAACAAAGCAGGAAAGCTGCAGTCCCAGCTTCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522162.1
CDS GCA 72 bp GAAAATACGAGTCAGCTCAGCTCTGATAACTTAAGCTaGATCTTCTTGTGCAGCCACCCAAGGGGAAGAGTC +
Preference number: 6 (lower is better)
Translates to: ENTSQLSSDNLS*IFLCSHPRGRV
Trigger: GACTCTTCCCCTTGGGTGGCTGCACAAGAAGATGCAGCTTAAGTTATCAGAGCTGAGCTGACTCGTATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472084.2
CDS CCA 72 bp GACAATCAATTAAAGCGCTCGAAAACTGCCTCAGCTTaGCTTCAATGCTTCTGTGCCTCATGCACATCCTGG +
Preference number: 6 (lower is better)
Translates to: DNQLKRSKTASA*LQCFCASCTSW
Trigger: CCAGGATGTGCATGAGGCACAGAAGCATTGAAGCCAAGCTGAGGCAGTTTTCGAGCGCTTTAATTGATTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519671.1
ENST00000522162.1
ENST00000529463.5
CDS CCA 72 bp GAGGGTCCATGGTCAGGCTTTTTAGATCTTCCGAGATaGTCTGAAGGTGGGTTATTTCCCCTAGCATTGAGA +
Preference number: 6 (lower is better)
Translates to: EGPWSGFLDLPR*SEGGLFPLALR
Trigger: TCTCAATGCTAGGGGAAATAACCCACCTTCAGACCATCTCGGAAGATCTAAAAAGCCTGACCATGGACCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000522118.1
ENST00000523179.5
ENST00000524090.5
CDS TCA 72 bp TCCGAAGCTGGGACTGCAGCTTTCCTGCTTTGTTTATaGAATCTTCCCAAACTGGATAGCTCCCCTTCATGT +
Preference number: 6 (lower is better)
Translates to: SEAGTAAFLLCL*NLPKLDSSPSC
Trigger: ACATGAAGGGGAGCTATCCAGTTTGGGAAGATTTCATAAACAAAGCAGGAAAGCTGCAGTCCCAGCTTCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000472084.2
ENST00000518547.6
ENST00000524243.5
CDS TCA 72 bp TACTTATCATTGACATCTTGGAGAGCACTGTCCAACTaGGGCTGGATATCACCTCTCCCAAGAGTGTCCACT +
Preference number: 6 (lower is better)
Translates to: YLSLTSWRALSN*GWISPLPRVST
Trigger: AGTGGACACTCTTGGGAGAGGTGATATCCAGCCTCAGTTGGACAGTGCTCTCCAAGATGTCAATGATAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325064.9
CDS TCA 72 bp TACTTATCATTGACATCTTGGAGAGCACTGTCCAACTaGGGCTGGATATCACCTCTCCCTTCTCACACTGCA +
Preference number: 6 (lower is better)
Translates to: YLSLTSWRALSN*GWISPLPSHTA
Trigger: TGCAGTGTGAGAAGGGAGAGGTGATATCCAGCCTCAGTTGGACAGTGCTCTCCAAGATGTCAATGATAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431961.6
ENST00000522118.1
CDS GCA 72 bp TGGAATGGTGGAGGACTTGTCGAACTCCTGCTGATCTaGCTCCTGGTCACCACTTACAGAGAAATAATCATA +
Preference number: 6 (lower is better)
Translates to: WNGGGLVELLLI*LLVTTYREIII
Trigger: TATGATTATTTCTCTGTAAGTGGTGACCAGGAGGCAGATCAGCAGGAGTTCGACAAGTCCTCCACCATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000519168.5
ENST00000520771.1
ENST00000523587.5
ENST00000524090.5
CDS CAA 72 bp AGACAATCAATTAAAGCGCTCGAAAACTGCCTCAGCTaGGCTTCAATGCTTCTGTGCCTCATGCACATCCTG +
Preference number: 6 (lower is better)
Translates to: RQSIKALENCLS*ASMLLCLMHIL
Trigger: CAGGATGTGCATGAGGCACAGAAGCATTGAAGCCAAGCTGAGGCAGTTTTCGAGCGCTTTAATTGATTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000518547.6
ENST00000519671.1
ENST00000522162.1
ENST00000529463.5
CDS TCA 72 bp TCCATGGTCAGGCTTTTTAGATCTTCCGAGATGGTCTaGAGGTGGGTTATTTCCCCTAGCATTGAGATTTCT +
Preference number: 6 (lower is better)
Translates to: SMVRLFRSSEMV*RWVISPSIEIS
Trigger: AGAAATCTCAATGCTAGGGGAAATAACCCACCTTCAGACCATCTCGGAAGATCTAAAAAGCCTGACCATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000325064.9
ENST00000378017.7
ENST00000431961.6
ENST00000518547.6
ENST00000522118.1
ENST00000523179.5
ENST00000524090.5
CDS TCA 72 bp ACAGCTCAAGGTTCAACAACCAGCACGTCATTAAAGTaGTCAAAGAACCCATCAAGCCAACTCGTGCAGAAA +
Preference number: 6 (lower is better)
Translates to: TAQGSTTSTSLK*SKNPSSQLVQK
Trigger: TTTCTGCACGAGTTGGCTTGATGGGTTCTTTGATCACTTTAATGACGTGCTGGTTGTTGAACCTTGAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472084.2
CDS GCA 72 bp GAAACTCAGAAAAATGGTCTATCCAATCATCCCTACTaGTTCCCATTCCACAAGGAAACAAGGAAAACCCAC +
Preference number: 6 (lower is better)
Translates to: ETQKNGLSNHPY*FPFHKETRKTH
Trigger: GTGGGTTTTCCTTGTTTCCTTGTGGAATGGGAAGCAGTAGGGATGATTGGATAGACCATTTTTCTGAGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472084.2