Pregenerated sensors for MTPN (Homo sapiens)
Ensembl gene IDs: ENSG00000105887Ensembl transcript IDs: ENST00000393085.4, ENST00000435723.1
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTCACCAACCTTATAGGCAGCGCTCTTAACTATGCCAGGAAATCCCCAGTAGAGATCCCAGTAAAAGCCTaGTCATGGTTCCTTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: VTNLIGSALNYARKSPVEIPVKA*SWFLLP Trigger: GGGCAAAAGGAACCATGATCAGGCTTTTACTGGGAT...CTCTACTGGGGATTTCCTGGCATAGTTAAGAGCGCTGCCTATAAGGTTGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| 3UTR-3UTR GCA 90 bp | GTCACCAACCTTATAGGCAGCGCTCTTAACTATGCCAGGAAATCCCCAGTAGAGGGTGTATTTTGTCTTTaGTCTCCCTTGGGTATAAGG | + |
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Preference number: 2 (lower is better) Translates to: VTNLIGSALNYARKSPVEGVFCL*SPLGIR Trigger: CCTTATACCCAAGGGAGAGCAAAGACAAAATACACC...CTCTACTGGGGATTTCCTGGCATAGTTAAGAGCGCTGCCTATAAGGTTGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| 3UTR-3UTR TCA 90 bp | TACATCACAGCAGCCACTACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGGGGAAGAGGCTTACTTaGTCAGGAATCCCAGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: YITAATTAQTVRATKYVEGKRLT*SGIPVK Trigger: TTTTACTGGGATTCCTGATCAAGTAAGCCTCTTCCC...CTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGTAGTGGCTGCTGTGATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAATCCCAGTAAAAGCCTaGTCATGGTTCCTTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: TAQTVRATKYVELAFVESIPVKA*SWFLLP Trigger: GGGCAAAAGGAACCATGATCAGGCTTTTACTGGGAT...TGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| 3UTR-3UTR TCA 90 bp | GGAGCTGAAAAGGTCAAATGTTACTGGTGTATTTTGTCTTTGCTCTCCCTTGGGGGGAAGAGGCTTACTTaGTCAGGAATCCCAGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: GAEKVKCYWCILSLLSLGGKRLT*SGIPVK Trigger: TTTTACTGGGATTCCTGATCAAGTAAGCCTCTTCCC...CCCAAGGGAGAGCAAAGACAAAATACACCAGTAACATTTGACCTTTTCAGCTCC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACAAGGTCAAATGTTACTaGTGTATTTTGTCTTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: AQTVRATKYVELAFVESDKVKCY*CILSLL Trigger: GAGCAAAGACAAAATACACCAGTAACATTTGACCTT...GTCTGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGTCTGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| 3UTR-3UTR CAA 90 bp | GGAGCTGAAAAGGTCAAATGTTACTGGTGTATTTTGTCTTTGCTCTCCCTTGGGAGGGAAGAGGCTTACTaGATCAGGAATCCCAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: GAEKVKCYWCILSLLSLGREEAY*IRNPSK Trigger: TTTACTGGGATTCCTGATCAAGTAAGCCTCTTCCCT...CCCAAGGGAGAGCAAAGACAAAATACACCAGTAACATTTGACCTTTTCAGCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| 3UTR-3UTR CAA 90 bp | GCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACTGTCTTTGCTCTCCCTaGGGTATAAGGTGTATATTT | + |
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Preference number: 3 (lower is better) Translates to: AQTVRATKYVELAFVESDCLCSP*GIRCIF Trigger: AAATATACACCTTATACCCAAGGGAGAGCAAAGACA...GTCTGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGTCTGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| 3UTR-3UTR CAA 90 bp | TACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACCTTCAACACAATCTAATAGGGAAGAGGCTTACTaGATCAGGAATCCCAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: YQICRVGLCRIRPSTQSNREEAY*IRNPSK Trigger: TTTACTGGGATTCCTGATCAAGTAAGCCTCTTCCCT...ATTAGATTGTGTTGAAGGTCTGATTCTACAAAGGCCAACTCTACATATTTGGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| 3UTR-3UTR CAA 90 bp | AAATATATTATGCAGGTGGGTTGGCATATGTTCAGCAGAAGCCTATCAACAACTTGTCTTTGCTCTCCCTaGGGTATAAGGTGTATATTT | + |
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Preference number: 3 (lower is better) Translates to: KYIMQVGWHMFSRSLSTTCLCSP*GIRCIF Trigger: AAATATACACCTTATACCCAAGGGAGAGCAAAGACA...AGTTGTTGATAGGCTTCTGCTGAACATATGCCAACCCACCTGCATAATATATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| 3UTR GCA 72 bp | CTGTTGCACTACGTTGATAGTTATAGACTGATAGAGTaGCCTCCATTTTCAATGAGGATGTCTCCATATTTT | + |
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Preference number: 3 (lower is better) Translates to: LLHYVDSYRLIE*PPFSMRMSPYF Trigger: AAAATATGGAGACATCCTCATTGAAAATGGAGGGCACTCTATCAGTCTATAACTATCAACGTAGTGCAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR CCA 90 bp | GGCAGCGCTCTTAACTATGCCAGGAAATCCCCAGTAGAGTGCATTCTTAAGGCACAGAGAGGTTCCGCCTaGCCGAGGAGAGGCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: GSALNYARKSPVECILKAQRGSA*PRRGRN Trigger: GTTCCTGCCTCTCCTCGGCCAGGCGGAACCTCTCTG...TGCCTTAAGAATGCACTCTACTGGGGATTTCCTGGCATAGTTAAGAGCGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR GCA 90 bp | TGCTTATCTCAGCACCCTAAGTTTACATCACAGCAGCCACTACTGCTCAGACAGGAAGGAGGGTTAGGCTaGCAGGCGGGCGAGGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: CLSQHPKFTSQQPLLLRQEGGLG*QAGEAV Trigger: AACTGCCTCGCCCGCCTGGCAGCCTAACCCTCCTTC...CTGTCTGAGCAGTAGTGGCTGCTGTGATGTAAACTTAGGGTGCTGAGATAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR GCA 90 bp | TCACCGAGGAAAGATTTGGTCACCAACCTTATAGGCAGCGCTCTTAACTATGCCCTTGTCGCACATCACTaGAGCGGGGCAGGCCGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SPRKDLVTNLIGSALNYALVAHH*SGAGRL Trigger: CAACCGGCCTGCCCCGCTGCAGTGATGTGCGACAAG...GGCATAGTTAAGAGCGCTGCCTATAAGGTTGGTGACCAAATCTTTCCTCGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR GCA 90 bp | ACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACCTTCAAGCAGCAGCAAGCGGATaGCGCCGGGCGAGAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TVRATKYVELAFVESDLQAAASG*RRARGR Trigger: CCTCCCTCTCGCCCGGCGGCATCCGCTTGCTGCTGC...TTGAAGGTCTGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR GCA 90 bp | GCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACGAAGGAGGGTTAGGCTaGCAGGCGGGCGAGGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: AQTVRATKYVELAFVESDEGGLG*QAGEAV Trigger: AACTGCCTCGCCCGCCTGGCAGCCTAACCCTCCTTC...GTCTGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGTCTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR CCA 90 bp | GGCAGCGCTCTTAACTATGCCAGGAAATCCCCAGTAGAGTGCATTCTTAAGGCAGGCGGTCAGTCCATCTaGGCCTTTCACAGTCTTATC | + |
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Preference number: 4 (lower is better) Translates to: GSALNYARKSPVECILKAGGQSI*AFHSLI Trigger: GATAAGACTGTGAAAGGCCCAGATGGACTGACCGCC...TGCCTTAAGAATGCACTCTACTGGGGATTTCCTGGCATAGTTAAGAGCGCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR CCA 90 bp | TGCTTATCTCAGCACCCTAAGTTTACATCACAGCAGCCACTACTGCTCAGACAGGGCGGTCAGTCCATCTaGGCCTTTCACAGTCTTATC | + |
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Preference number: 4 (lower is better) Translates to: CLSQHPKFTSQQPLLLRQGGQSI*AFHSLI Trigger: GATAAGACTGTGAAAGGCCCAGATGGACTGACCGCC...CTGTCTGAGCAGTAGTGGCTGCTGTGATGTAAACTTAGGGTGCTGAGATAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR TCA 90 bp | TCACCGAGGAAAGATTTGGTCACCAACCTTATAGGCAGCGCTCTTAACTATGCCACTGGAGAAGAGCTTTaGTTGCCTGGTTGTCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SPRKDLVTNLIGSALNYATGEEL*LPGCQW Trigger: CCACTGACAACCAGGCAATCAAAGCTCTTCTCCAGT...GGCATAGTTAAGAGCGCTGCCTATAAGGTTGGTGACCAAATCTTTCCTCGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR GCA 90 bp | GCTAGAGCTAATTGCTTATCTCAGCACCCTAAGTTTACATCACAGCAGCCACTAGAAAGAAAGTTCTTTTaGGGCCACCGGGCCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ARANCLSQHPKFTSQQPLERKFF*GHRAQQ Trigger: CTGCTGGGCCCGGTGGCCGCAAAAGAACTTTCTTTC...TAGTGGCTGCTGTGATGTAAACTTAGGGTGCTGAGATAAGCAATTAGCTCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR GCA 90 bp | CTGAAAAGGTCAAATGTTACTGGTGTATTTTGTCTTTGCTCTCCCTTGGGTATACTTGTCGCACATCACTaGAGCGGGGCAGGCCGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LKRSNVTGVFCLCSPLGILVAHH*SGAGRL Trigger: CAACCGGCCTGCCCCGCTGCAGTGATGTGCGACAAG...TATACCCAAGGGAGAGCAAAGACAAAATACACCAGTAACATTTGACCTTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR CCA 90 bp | CTGAAAAGGTCAAATGTTACTGGTGTATTTTGTCTTTGCTCTCCCTTGGGTATACAGAGAGGTTCCGCCTaGCCGAGGAGAGGCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LKRSNVTGVFCLCSPLGIQRGSA*PRRGRN Trigger: GTTCCTGCCTCTCCTCGGCCAGGCGGAACCTCTCTG...TATACCCAAGGGAGAGCAAAGACAAAATACACCAGTAACATTTGACCTTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR CCA 90 bp | GTCACCAACCTTATAGGCAGCGCTCTTAACTATGCCAGGAAATCCCCAGTAGAGCCATCCATCCATCACTaGAGAAGAGCTTTGATTGCC | + |
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Preference number: 4 (lower is better) Translates to: VTNLIGSALNYARKSPVEPSIHH*RRALIA Trigger: GGCAATCAAAGCTCTTCTCCAGTGATGGATGGATGG...CTCTACTGGGGATTTCCTGGCATAGTTAAGAGCGCTGCCTATAAGGTTGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR TCA 90 bp | ATCACAGCAGCCACTACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGTTTTCAGGGCCCACATaGACTCCTTGTCGCACATCA | + |
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Preference number: 4 (lower is better) Translates to: ITAATTAQTVRATKYVELFSGPT*TPCRTS Trigger: TGATGTGCGACAAGGAGTTCATGTGGGCCCTGAAAA...CAACTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGTAGTGGCTGCTGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR TCA 90 bp | GGAGCTGAAAAGGTCAAATGTTACTGGTGTATTTTGTCTTTGCTCTCCCTTGGGCTTCTAGTGTCCGGTTaGCATCTTCTCCCTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GAEKVKCYWCILSLLSLGLLVSG*HLLPWP Trigger: TGGCCAAGGGAGAAGATGTCAACCGGACACTAGAAG...CCCAAGGGAGAGCAAAGACAAAATACACCAGTAACATTTGACCTTTTCAGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR TCA 90 bp | TGCTTATCTCAGCACCCTAAGTTTACATCACAGCAGCCACTACTGCTCAGACAGATCCCAGTAAAAGCCTaGTCATGGTTCCTTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: CLSQHPKFTSQQPLLLRQIPVKA*SWFLLP Trigger: GGGCAAAAGGAACCATGATCAGGCTTTTACTGGGAT...CTGTCTGAGCAGTAGTGGCTGCTGTGATGTAAACTTAGGGTGCTGAGATAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR GCA 90 bp | ACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGAAAGAAAGTTCTTTTaGGGCCACCGGGCCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TAQTVRATKYVELAFVESERKFF*GHRAQQ Trigger: CTGCTGGGCCCGGTGGCCGCAAAAGAACTTTCTTTC...TGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR GCA 90 bp | TGCTTATCTCAGCACCCTAAGTTTACATCACAGCAGCCACTACTGCTCAGACAGGAGAAGAGCTTTGATTaGCTGGTTGTCAGTGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: CLSQHPKFTSQQPLLLRQEKSFD*LVVSGF Trigger: GAAGCCACTGACAACCAGGCAATCAAAGCTCTTCTC...CTGTCTGAGCAGTAGTGGCTGCTGTGATGTAAACTTAGGGTGCTGAGATAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR GCA 90 bp | TGCTTATCTCAGCACCCTAAGTTTACATCACAGCAGCCACTACTGCTCAGACAGAAAGGCCTACTTGTTTaGAGCTTCCACACACTGCAC | + |
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Preference number: 4 (lower is better) Translates to: CLSQHPKFTSQQPLLLRQKGLLV*SFHTLH Trigger: GTGCAGTGTGTGGAAGCTGCAAACAAGTAGGCCTTT...CTGTCTGAGCAGTAGTGGCTGCTGTGATGTAAACTTAGGGTGCTGAGATAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR TCA 90 bp | TACATCACAGCAGCCACTACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGATCCCAGTAAAAGCCTaGTCATGGTTCCTTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: YITAATTAQTVRATKYVEIPVKA*SWFLLP Trigger: GGGCAAAAGGAACCATGATCAGGCTTTTACTGGGAT...CTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGTAGTGGCTGCTGTGATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR TCA 90 bp | TCACCGAGGAAAGATTTGGTCACCAACCTTATAGGCAGCGCTCTTAACTATGCCCTGGGTTTAGAAAGGTaGGCTATGCGTAGAAGAACT | + |
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Preference number: 4 (lower is better) Translates to: SPRKDLVTNLIGSALNYALGLER*AMRRRT Trigger: AGTTCTTCTACGCATAGCTCACCTTTCTAAACCCAG...GGCATAGTTAAGAGCGCTGCCTATAAGGTTGGTGACCAAATCTTTCCTCGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR GCA 90 bp | GGCAGCGCTCTTAACTATGCCAGGAAATCCCCAGTAGAGTGCATTCTTAAGGCAGGTGTATTTTGTCTTTaGTCTCCCTTGGGTATAAGG | + |
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Preference number: 4 (lower is better) Translates to: GSALNYARKSPVECILKAGVFCL*SPLGIR Trigger: CCTTATACCCAAGGGAGAGCAAAGACAAAATACACC...TGCCTTAAGAATGCACTCTACTGGGGATTTCCTGGCATAGTTAAGAGCGCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR GCA 90 bp | GCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACGAGAAGAGCTTTGATTaGCTGGTTGTCAGTGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: AQTVRATKYVELAFVESDEKSFD*LVVSGF Trigger: GAAGCCACTGACAACCAGGCAATCAAAGCTCTTCTC...GTCTGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGTCTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR GCA 90 bp | ACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACCTTCAAACCCACACACCCACATaGCAACCAACCAACCAACCA | + |
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Preference number: 4 (lower is better) Translates to: TVRATKYVELAFVESDLQTHTPT*QPTNQP Trigger: TGGTTGGTTGGTTGGTTGGCATGTGGGTGTGTGGGT...TTGAAGGTCTGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR CCA 90 bp | ATTATGCAGGTGGGTTGGCATATGTTCAGCAGAAGCCTATCAACAACTCTGGGAGCCTATCAACAACTCTaGGAAACCTGGTTACAAGTG | + |
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Preference number: 4 (lower is better) Translates to: IMQVGWHMFSRSLSTTLGAYQQL*ETWLQV Trigger: CACTTGTAACCAGGTTTCCCAGAGTTGTTGATAGGC...TCCCAGAGTTGTTGATAGGCTTCTGCTGAACATATGCCAACCCACCTGCATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR GCA 90 bp | TGCTTATCTCAGCACCCTAAGTTTACATCACAGCAGCCACTACTGCTCAGACAGTGGAGCATTAATATCTaGTCCTTTCAGCAGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: CLSQHPKFTSQQPLLLRQWSINI*SFQQQK Trigger: TTTCTGCTGCTGAAAGGAGCAGATATTAATGCTCCA...CTGTCTGAGCAGTAGTGGCTGCTGTGATGTAAACTTAGGGTGCTGAGATAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR GCA 90 bp | GAAAGGGAAGAGGCTTACTTGATCAGGAATCCCAGTAAAAGCCTGATCATGGTTAAATCCCCAGTAGAGTaGATTCTTAAGGCAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: EREEAYLIRNPSKSLIMVKSPVE*ILKAEG Trigger: GCCTTCTGCCTTAAGAATGCACTCTACTGGGGATTT...AACCATGATCAGGCTTTTACTGGGATTCCTGATCAAGTAAGCCTCTTCCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR CCA 90 bp | GCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACCTTCAACACAATCTATTGCCTGGTTGTCAGTaGCTTCAAAGGCGGTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: ATKYVELAFVESDLQHNLLPGCQ*LQRRSV Trigger: GACTGACCGCCTTTGAAGCCACTGACAACCAGGCAA...TAGATTGTGTTGAAGGTCTGATTCTACAAAGGCCAACTCTACATATTTGGTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR CCA 90 bp | ACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCACCATCCATCCATCACTaGAGAAGAGCTTTGATTGCC | + |
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Preference number: 4 (lower is better) Translates to: TAQTVRATKYVELAFVESPSIHH*RRALIA Trigger: GGCAATCAAAGCTCTTCTCCAGTGATGGATGGATGG...TGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR CCA 90 bp | GCTAGAGCTAATTGCTTATCTCAGCACCCTAAGTTTACATCACAGCAGCCACTATCTTATCAGCACCCTTaGCCACATAGTCTTTCACCT | + |
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Preference number: 4 (lower is better) Translates to: ARANCLSQHPKFTSQQPLSYQHP*PHSLSP Trigger: AGGTGAAAGACTATGTGGCCAAGGGTGCTGATAAGA...TAGTGGCTGCTGTGATGTAAACTTAGGGTGCTGAGATAAGCAATTAGCTCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435723.1 |
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| CDS-3UTR TCA 90 bp | ATTATGCAGGTGGGTTGGCATATGTTCAGCAGAAGCCTATCAACAACTCTGGGATTATTATCCACAATCTaGGTATCAGTCCCTAACCCA | + |
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Preference number: 4 (lower is better) Translates to: IMQVGWHMFSRSLSTTLGLLSTI*VSVPNP Trigger: TGGGTTAGGGACTGATACTCAGATTGTGGATAATAA...TCCCAGAGTTGTTGATAGGCTTCTGCTGAACATATGCCAACCCACCTGCATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR TCA 90 bp | TGCTTATCTCAGCACCCTAAGTTTACATCACAGCAGCCACTACTGCTCAGACAGCAACCAACCAGCAACTaGTCAGTAAAACTTGTTATT | + |
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Preference number: 4 (lower is better) Translates to: CLSQHPKFTSQQPLLLRQQPTSN*SVKLVI Trigger: AATAACAAGTTTTACTGATCAGTTGCTGGTTGGTTG...CTGTCTGAGCAGTAGTGGCTGCTGTGATGTAAACTTAGGGTGCTGAGATAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR GCA 90 bp | GGAGCTGAAAAGGTCAAATGTTACTGGTGTATTTTGTCTTTGCTCTCCCTTGGGAAGGCTAGAGCTAATTaGTTATCTCAGCACCCTAAG | + |
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Preference number: 4 (lower is better) Translates to: GAEKVKCYWCILSLLSLGKARAN*LSQHPK Trigger: CTTAGGGTGCTGAGATAAGCAATTAGCTCTAGCCTT...CCCAAGGGAGAGCAAAGACAAAATACACCAGTAACATTTGACCTTTTCAGCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR GCA 90 bp | GGAGCTGAAAAGGTCAAATGTTACTGGTGTATTTTGTCTTTGCTCTCCCTTGGGGGACAATGCACTCTCTaGAATAGCCAACTACAACAA | + |
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Preference number: 4 (lower is better) Translates to: GAEKVKCYWCILSLLSLGGQCTL*NSQLQQ Trigger: TTGTTGTAGTTGGCTATTGCAGAGAGTGCATTGTCC...CCCAAGGGAGAGCAAAGACAAAATACACCAGTAACATTTGACCTTTTCAGCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR GCA 90 bp | GGCAGCGCTCTTAACTATGCCAGGAAATCCCCAGTAGAGTGCATTCTTAAGGCATTGAGTATACAATATTaGATGGAAGAAAACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSALNYARKSPVECILKALSIQY*MEENSS Trigger: GCTGCTGTTTTCTTCCATGCAATATTGTATACTCAA...TGCCTTAAGAATGCACTCTACTGGGGATTTCCTGGCATAGTTAAGAGCGCTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR CCA 90 bp | GTCACCAACCTTATAGGCAGCGCTCTTAACTATGCCAGGAAATCCCCAGTAGAGAACTGTGAACCATCTTaGTCAGTCTATTCTATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VTNLIGSALNYARKSPVENCEPS*SVYSIL Trigger: TAGAATAGAATAGACTGACCAAGATGGTTCACAGTT...CTCTACTGGGGATTTCCTGGCATAGTTAAGAGCGCTGCCTATAAGGTTGGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR TCA 90 bp | ACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACATGAAATCCATGTaGAAGGGGAGAGAAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAQTVRATKYVELAFVESDMKSM*KGRENP Trigger: TGGATTTTCTCTCCCCTTTCACATGGATTTCATGTC...TGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR GCA 90 bp | ACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAAAGCTGCCCACAATCTaGTGCATAATGAAGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TAQTVRATKYVELAFVESKLPTI*CIMKRF Trigger: AAACCTCTTCATTATGCAGCAGATTGTGGGCAGCTT...TGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR GCA 90 bp | GAAAGGGAAGAGGCTTACTTGATCAGGAATCCCAGTAAAAGCCTGATCATGGTTTATAGACTGATAGAGTaGCCTCCATTTTCAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EREEAYLIRNPSKSLIMVYRLIE*PPFSMR Trigger: CCTCATTGAAAATGGAGGGCACTCTATCAGTCTATA...AACCATGATCAGGCTTTTACTGGGATTCCTGATCAAGTAAGCCTCTTCCCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR CCA 90 bp | TACATCACAGCAGCCACTACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGAATATATTATGCAGGTaGGTTGGCATATGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YITAATTAQTVRATKYVENILCR*VGICSA Trigger: TGCTGAACATATGCCAACCCACCTGCATAATATATT...CTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGTAGTGGCTGCTGTGATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| 3UTR CAA 72 bp | ACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGTaGGCCTTTGTAGAATCAGACCTTCAACACAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: TAQTVRATKYVE*AFVESDLQHNL Trigger: TAGATTGTGTTGAAGGTCTGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
||
| CDS-3UTR TCA 90 bp | TACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACCTTCAACACAATCTAATTTTTCAGGGCCCACATaGACTCCTTGTCGCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: YQICRVGLCRIRPSTQSNFSGPT*TPCRTS Trigger: TGATGTGCGACAAGGAGTTCATGTGGGCCCTGAAAA...ATTAGATTGTGTTGAAGGTCTGATTCTACAAAGGCCAACTCTACATATTTGGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
||
| CDS-3UTR TCA 90 bp | GCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACCTTCAACACAATCTAGGGAAGAGGCTTACTTaGTCAGGAATCCCAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ATKYVELAFVESDLQHNLGKRLT*SGIPVK Trigger: TTTTACTGGGATTCCTGATCAAGTAAGCCTCTTCCC...TAGATTGTGTTGAAGGTCTGATTCTACAAAGGCCAACTCTACATATTTGGTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
||
| CDS-3UTR TCA 90 bp | GGAGCTGAAAAGGTCAAATGTTACTGGTGTATTTTGTCTTTGCTCTCCCTTGGGCCTCCCCTAAAAATTTaGGGTACATTCAATTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: GAEKVKCYWCILSLLSLGPPLKI*GTFNYC Trigger: GCAATAATTGAATGTACCTCAAATTTTTAGGGGAGG...CCCAAGGGAGAGCAAAGACAAAATACACCAGTAACATTTGACCTTTTCAGCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR CCA 90 bp | TACATCACAGCAGCCACTACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGAAGGTCAAATGTTACTaGTGTATTTTGTCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YITAATTAQTVRATKYVEKVKCY*CILSLL Trigger: GAGCAAAGACAAAATACACCAGTAACATTTGACCTT...CTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGTAGTGGCTGCTGTGATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
||
| CDS-3UTR CCA 90 bp | GCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACCTTCAACACAATCTAATTATGCAGGTGGGTTaGCATATGTTCAGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATKYVELAFVESDLQHNLIMQVG*HMFSRS Trigger: GCTTCTGCTGAACATATGCCAACCCACCTGCATAAT...TAGATTGTGTTGAAGGTCTGATTCTACAAAGGCCAACTCTACATATTTGGTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR CCA 90 bp | GCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACGCAAGCTTATATGGATaGCAAGTCAAAGGAATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AQTVRATKYVELAFVESDASLYG*QVKGIL Trigger: TAAGATTCCTTTGACTTGCCATCCATATAAGCTTGC...GTCTGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGTCTGAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR TCA 90 bp | TTAGAAAGGGAAGAGGCTTACTTGATCAGGAATCCCAGTAAAAGCCTGATCATGTTATCTAAAGAGACATaGAATCCATGTGAAAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LEREEAYLIRNPSKSLIMLSKET*NPCERG Trigger: TCCCCTTTCACATGGATTTCATGTCTCTTTAGATAA...CATGATCAGGCTTTTACTGGGATTCCTGATCAAGTAAGCCTCTTCCCTTTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGAAAAGGTCAAATGTTACTGGTGTATTTTGTCTTTGCTCTCCCTTGGGATCAAAACACCCTGTTaGACTACGTTGATAGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: GAEKVKCYWCILSLLSLGIKTPC*TTLIVI Trigger: TATAACTATCAACGTAGTGCAACAGGGTGTTTTGAT...CCCAAGGGAGAGCAAAGACAAAATACACCAGTAACATTTGACCTTTTCAGCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR TCA 90 bp | TACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACCTTCAACACAATCTAATGGGAAGAGGCTTACTTaGTCAGGAATCCCAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YQICRVGLCRIRPSTQSNGKRLT*SGIPVK Trigger: TTTTACTGGGATTCCTGATCAAGTAAGCCTCTTCCC...ATTAGATTGTGTTGAAGGTCTGATTCTACAAAGGCCAACTCTACATATTTGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
||
| CDS-3UTR TCA 90 bp | AAATATATTATGCAGGTGGGTTGGCATATGTTCAGCAGAAGCCTATCAACAACTGCCCTCCATTTTCAATaGGGATGTCTCCATATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KYIMQVGWHMFSRSLSTTALHFQ*GCLHIL Trigger: TAAAATATGGAGACATCCTCATTGAAAATGGAGGGC...AGTTGTTGATAGGCTTCTGCTGAACATATGCCAACCCACCTGCATAATATATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR CCA 90 bp | ACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAAAGGTCAAATGTTACTaGTGTATTTTGTCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAQTVRATKYVELAFVESKVKCY*CILSLL Trigger: GAGCAAAGACAAAATACACCAGTAACATTTGACCTT...TGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
||
| CDS-3UTR TCA 90 bp | TACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACCTTCAACACAATCTAATCTTATCAGCACCCTTTaGCAGAAGCAATTTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: YQICRVGLCRIRPSTQSNLISTL*QKQFHT Trigger: TGTGTGAAATTGCTTCTGTCAAAGGGTGCTGATAAG...ATTAGATTGTGTTGAAGGTCTGATTCTACAAAGGCCAACTCTACATATTTGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR GCA 90 bp | TACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACCTTCAACACAATCTAATGGTGTATTTTGTCTTTaGTCTCCCTTGGGTATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YQICRVGLCRIRPSTQSNGVFCL*SPLGIR Trigger: CCTTATACCCAAGGGAGAGCAAAGACAAAATACACC...ATTAGATTGTGTTGAAGGTCTGATTCTACAAAGGCCAACTCTACATATTTGGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
||
| CDS-3UTR GCA 90 bp | TACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACCTTCAACACAATCTAATAAGGCTAGAGCTAATTaGTTATCTCAGCACCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YQICRVGLCRIRPSTQSNKARAN*LSQHPK Trigger: CTTAGGGTGCTGAGATAAGCAATTAGCTCTAGCCTT...ATTAGATTGTGTTGAAGGTCTGATTCTACAAAGGCCAACTCTACATATTTGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
||
| CDS GCA 90 bp | GGCCGCGCGAAGCCGGAGAGGAGAAGAAGAGAAGGAGGGTTAGGCTaGCAGGCGGGCGAGGCAGTTGGCCGCGGCGACCGTTCGGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRAKPERRRREGGLG*QAGEAVGRGDRSGG Trigger: CCCGCCCGAACGGTCGCCGCGGCCAACTGCCTCGCCCGCCTGGCAGCCTAACCCTCCTTCTCTTCTTCTCCTCTCCGGCTTCGCGCGGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS GCA 90 bp | CAGTTGGCCGCGGCGACCGTTCGGGCGGGAGAAAGAAAGTTCTTTTaGGGCCACCGGGCCCAGCAGAGAGGTTCCGCCTGGCCGAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QLAAATVRAGERKFF*GHRAQQRGSAWPRR Trigger: TCTCCTCGGCCAGGCGGAACCTCTCTGCTGGGCCCGGTGGCCGCAAAAGAACTTTCTTTCTCCCGCCCGAACGGTCGCCGCGGCCAACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS GCA 90 bp | GTCTCCGTTTTTCAGGGCCCACATGAACTCCTTGTCGCACATCACTaGAGCGGGGCAGGCCGGTTGGCCGGGCAGAAGATGAGGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VSVFQGPHELLVAHH*SGAGRLAGQKMRRR Trigger: CCGCCTCCTCATCTTCTGCCCGGCCAACCGGCCTGCCCCGCTGCAGTGATGTGCGACAAGGAGTTCATGTGGGCCCTGAAAAACGGAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS CCA 90 bp | GAGAAGAAGAGAAGGAGGGTTAGGCTGCCAGGCGGGCGAGGCAGTTaGCCGCGGCGACCGTTCGGGCGGGAGAAAGAAAGTTCTTTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: EKKRRRVRLPGGRGS*PRRPFGREKESSFA Trigger: CGCAAAAGAACTTTCTTTCTCCCGCCCGAACGGTCGCCGCGGCCAACTGCCTCGCCCGCCTGGCAGCCTAACCCTCCTTCTCTTCTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR CAA 90 bp | TACATCACAGCAGCCACTACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGAGGCGGGCGAGGCAGTaGGCCGCGGCGACCGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: YITAATTAQTVRATKYVERRARQ*AAATVR Trigger: CCGAACGGTCGCCGCGGCCAACTGCCTCGCCCGCCT...CTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGTAGTGGCTGCTGTGATGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR CAA 90 bp | GTCACCAACCTTATAGGCAGCGCTCTTAACTATGCCAGGAAATCCCCAGTAGAGAGCGGGGCAGGCCGGTaGGCCGGGCAGAAGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VTNLIGSALNYARKSPVESGAGR*AGQKMR Trigger: CCTCATCTTCTGCCCGGCCAACCGGCCTGCCCCGCT...CTCTACTGGGGATTTCCTGGCATAGTTAAGAGCGCTGCCTATAAGGTTGGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGAAAAGGTCAAATGTTACTGGTGTATTTTGTCTTTGCTCTCCCTTGGGAGGCGGGCGAGGCAGTaGGCCGCGGCGACCGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GAEKVKCYWCILSLLSLGRRARQ*AAATVR Trigger: CCGAACGGTCGCCGCGGCCAACTGCCTCGCCCGCCT...CCCAAGGGAGAGCAAAGACAAAATACACCAGTAACATTTGACCTTTTCAGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS TCA 90 bp | CATAGTCTTTCACCTCATCCAAGTCTCCGTTTTTCAGGGCCCACATaGACTCCTTGTCGCACATCACTGCAGCGGGGCAGGCCGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HSLSPHPSLRFSGPT*TPCRTSLQRGRPVG Trigger: GCCAACCGGCCTGCCCCGCTGCAGTGATGTGCGACAAGGAGTTCATGTGGGCCCTGAAAAACGGAGACTTGGATGAGGTGAAAGACTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS GCA 90 bp | CGGAGTTATCAGTCCATCCATCCATCACTGGAGAAGAGCTTTGATTaGCTGGTTGTCAGTGGCTTCAAAGGCGGTCAGTCCATCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSYQSIHPSLEKSFD*LVVSGFKGGQSIWA Trigger: GGCCCAGATGGACTGACCGCCTTTGAAGCCACTGACAACCAGGCAATCAAAGCTCTTCTCCAGTGATGGATGGATGGACTGATAACTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR CAA 90 bp | GTCACCAACCTTATAGGCAGCGCTCTTAACTATGCCAGGAAATCCCCAGTAGAGGCCCACATGAACTCCTaGTCGCACATCACTGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: VTNLIGSALNYARKSPVEAHMNS*SHITAA Trigger: CGCTGCAGTGATGTGCGACAAGGAGTTCATGTGGGC...CTCTACTGGGGATTTCCTGGCATAGTTAAGAGCGCTGCCTATAAGGTTGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS TCA 90 bp | CTTCCGGAGTTATCAGTCCATCCATCCATCACTGGAGAAGAGCTTTaGTTGCCTGGTTGTCAGTGGCTTCAAAGGCGGTCAGTCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPELSVHPSITGEEL*LPGCQWLQRRSVHL Trigger: CAGATGGACTGACCGCCTTTGAAGCCACTGACAACCAGGCAATCAAAGCTCTTCTCCAGTGATGGATGGATGGACTGATAACTCCGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS CCA 90 bp | CAGGAGAGTCATTCTTCCGGAGTTATCAGTCCATCCATCCATCACTaGAGAAGAGCTTTGATTGCCTGGTTGTCAGTGGCTTCAAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QESHSSGVISPSIHH*RRALIAWLSVASKA Trigger: CGCCTTTGAAGCCACTGACAACCAGGCAATCAAAGCTCTTCTCCAGTGATGGATGGATGGACTGATAACTCCGGAAGAATGACTCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS CCA 90 bp | TTTGATTGCCTGGTTGTCAGTGGCTTCAAAGGCGGTCAGTCCATCTaGGCCTTTCACAGTCTTATCAGCACCCTTGGCCACATAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FDCLVVSGFKGGQSI*AFHSLISTLGHIVF Trigger: AAAGACTATGTGGCCAAGGGTGCTGATAAGACTGTGAAAGGCCCAGATGGACTGACCGCCTTTGAAGCCACTGACAACCAGGCAATCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435723.1 |
||
| CDS-3UTR CAA 90 bp | TGCTTATCTCAGCACCCTAAGTTTACATCACAGCAGCCACTACTGCTCAGACAGGCTTTGATTGCCTGGTaGTCAGTGGCTTCAAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CLSQHPKFTSQQPLLLRQALIAW*SVASKA Trigger: CGCCTTTGAAGCCACTGACAACCAGGCAATCAAAGC...CTGTCTGAGCAGTAGTGGCTGCTGTGATGTAAACTTAGGGTGCTGAGATAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
||
| CDS-3UTR CAA 90 bp | ACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGCCCACATGAACTCCTaGTCGCACATCACTGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TAQTVRATKYVELAFVESAHMNS*SHITAA Trigger: CGCTGCAGTGATGTGCGACAAGGAGTTCATGTGGGC...TGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
||
| CDS-3UTR CAA 90 bp | ATCACAGCAGCCACTACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGGCTTTGATTGCCTGGTaGTCAGTGGCTTCAAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ITAATTAQTVRATKYVELALIAW*SVASKA Trigger: CGCCTTTGAAGCCACTGACAACCAGGCAATCAAAGC...CAACTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGTAGTGGCTGCTGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
||
| CDS-3UTR CAA 90 bp | TTAAGGCAGAAGGCTAGAGCTAATTGCTTATCTCAGCACCCTAAGTTTACATCAAGAAAGAAAGTTCTTTaGCGGCCACCGGGCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRQKARANCLSQHPKFTSRKKVL*RPPGPA Trigger: TGCTGGGCCCGGTGGCCGCAAAAGAACTTTCTTTCT...TGATGTAAACTTAGGGTGCTGAGATAAGCAATTAGCTCTAGCCTTCTGCCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
||
| CDS-3UTR CAA 90 bp | TTAAGGCAGAAGGCTAGAGCTAATTGCTTATCTCAGCACCCTAAGTTTACATCACCTTCTAGTGTCCGGTaGACATCTTCTCCCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRQKARANCLSQHPKFTSPSSVR*TSSPLA Trigger: GGCCAAGGGAGAAGATGTCAACCGGACACTAGAAGG...TGATGTAAACTTAGGGTGCTGAGATAAGCAATTAGCTCTAGCCTTCTGCCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR CAA 90 bp | GCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACCACTGGAGAAGAGCTTaGATTGCCTGGTTGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AQTVRATKYVELAFVESDHWRRA*IAWLSV Trigger: CACTGACAACCAGGCAATCAAAGCTCTTCTCCAGTG...GTCTGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGTCTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
||
| CDS-3UTR CAA 90 bp | ATCACAGCAGCCACTACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGTCACCGAGGAAAGATTaGGTCACCAACCTTATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ITAATTAQTVRATKYVELSPRKD*VTNLIG Trigger: GCCTATAAGGTTGGTGACCAAATCTTTCCTCGGTGA...CAACTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGTAGTGGCTGCTGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR CAA 90 bp | ATCACAGCAGCCACTACTGCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGAGGGAAGAGGCTTACTaGATCAGGAATCCCAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: ITAATTAQTVRATKYVELREEAY*IRNPSK Trigger: TTTACTGGGATTCCTGATCAAGTAAGCCTCTTCCCT...CAACTCTACATATTTGGTAGCCCTAACTGTCTGAGCAGTAGTGGCTGCTGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
||
| CDS-3UTR CAA 90 bp | GGCAGCGCTCTTAACTATGCCAGGAAATCCCCAGTAGAGTGCATTCTTAAGGCAGCTGCAAGGGAGACTTaGTTAGTACACTACTATAAA | + |
|
Preference number: 5 (lower is better) Translates to: GSALNYARKSPVECILKAAARET*LVHYYK Trigger: TTTATAGTAGTGTACTAACAAAGTCTCCCTTGCAGC...TGCCTTAAGAATGCACTCTACTGGGGATTTCCTGGCATAGTTAAGAGCGCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR CAA 90 bp | GCTCAGACAGTTAGGGCTACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACAAAAGGCCTACTTGTTaGCAGCTTCCACACACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AQTVRATKYVELAFVESDKRPTC*QLPHTA Trigger: TGCAGTGTGTGGAAGCTGCAAACAAGTAGGCCTTTT...GTCTGATTCTACAAAGGCCAACTCTACATATTTGGTAGCCCTAACTGTCTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393085.4 |
||
| CDS-3UTR CAA 90 bp | ATTATGCAGGTGGGTTGGCATATGTTCAGCAGAAGCCTATCAACAACTCTGGGATCTTATCAGCACCCTTaGACAGAAGCAATTTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: IMQVGWHMFSRSLSTTLGSYQHP*TEAISH Trigger: GTGTGAAATTGCTTCTGTCAAAGGGTGCTGATAAGA...TCCCAGAGTTGTTGATAGGCTTCTGCTGAACATATGCCAACCCACCTGCATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR CAA 90 bp | GCTAGAGCTAATTGCTTATCTCAGCACCCTAAGTTTACATCACAGCAGCCACTATATTATGCAGGTGGGTaGGCATATGTTCAGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: ARANCLSQHPKFTSQQPLYYAGG*AYVQQK Trigger: CTTCTGCTGAACATATGCCAACCCACCTGCATAATA...TAGTGGCTGCTGTGATGTAAACTTAGGGTGCTGAGATAAGCAATTAGCTCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR CAA 90 bp | TACCAAATATGTAGAGTTGGCCTTTGTAGAATCAGACCTTCAACACAATCTAATAGAAAGAAAGTTCTTTaGCGGCCACCGGGCCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: YQICRVGLCRIRPSTQSNRKKVL*RPPGPA Trigger: TGCTGGGCCCGGTGGCCGCAAAAGAACTTTCTTTCT...ATTAGATTGTGTTGAAGGTCTGATTCTACAAAGGCCAACTCTACATATTTGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGGTCAAATGTTACTGGTGTATTTTGTCTTTGCTCTCCCTTGGGTATACACTGGAGAAGAGCTTaGATTGCCTGGTTGTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: LKRSNVTGVFCLCSPLGIHWRRA*IAWLSV Trigger: CACTGACAACCAGGCAATCAAAGCTCTTCTCCAGTG...TATACCCAAGGGAGAGCAAAGACAAAATACACCAGTAACATTTGACCTTTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR CAA 90 bp | ATTATGCAGGTGGGTTGGCATATGTTCAGCAGAAGCCTATCAACAACTCTGGGATGTCTTTGCTCTCCCTaGGGTATAAGGTGTATATTT | + |
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Preference number: 5 (lower is better) Translates to: IMQVGWHMFSRSLSTTLGCLCSP*GIRCIF Trigger: AAATATACACCTTATACCCAAGGGAGAGCAAAGACA...TCCCAGAGTTGTTGATAGGCTTCTGCTGAACATATGCCAACCCACCTGCATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR CAA 90 bp | GAAAGGGAAGAGGCTTACTTGATCAGGAATCCCAGTAAAAGCCTGATCATGGTTTGTCTTTGCTCTCCCTaGGGTATAAGGTGTATATTT | + |
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Preference number: 5 (lower is better) Translates to: EREEAYLIRNPSKSLIMVCLCSP*GIRCIF Trigger: AAATATACACCTTATACCCAAGGGAGAGCAAAGACA...AACCATGATCAGGCTTTTACTGGGATTCCTGATCAAGTAAGCCTCTTCCCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR CAA 90 bp | GCTAGAGCTAATTGCTTATCTCAGCACCCTAAGTTTACATCACAGCAGCCACTAACCAAATATGTAGAGTaGGCCTTTGTAGAATCAGAC | + |
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Preference number: 5 (lower is better) Translates to: ARANCLSQHPKFTSQQPLTKYVE*AFVESD Trigger: GTCTGATTCTACAAAGGCCAACTCTACATATTTGGT...TAGTGGCTGCTGTGATGTAAACTTAGGGTGCTGAGATAAGCAATTAGCTCTAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGGTCAAATGTTACTGGTGTATTTTGTCTTTGCTCTCCCTTGGGTATAAGGGAAGAGGCTTACTaGATCAGGAATCCCAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: LKRSNVTGVFCLCSPLGIREEAY*IRNPSK Trigger: TTTACTGGGATTCCTGATCAAGTAAGCCTCTTCCCT...TATACCCAAGGGAGAGCAAAGACAAAATACACCAGTAACATTTGACCTTTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR CAA 90 bp | TTAGAAAGGGAAGAGGCTTACTTGATCAGGAATCCCAGTAAAAGCCTGATCATGACCAAATATGTAGAGTaGGCCTTTGTAGAATCAGAC | + |
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Preference number: 5 (lower is better) Translates to: LEREEAYLIRNPSKSLIMTKYVE*AFVESD Trigger: GTCTGATTCTACAAAGGCCAACTCTACATATTTGGT...CATGATCAGGCTTTTACTGGGATTCCTGATCAAGTAAGCCTCTTCCCTTTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS-3UTR CAA 90 bp | AAATATATTATGCAGGTGGGTTGGCATATGTTCAGCAGAAGCCTATCAACAACTACTACCAGCAGGAGTTaGAAAGTGTTTCAATGCTAT | + |
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Preference number: 5 (lower is better) Translates to: KYIMQVGWHMFSRSLSTTTTSRS*KVFQCY Trigger: ATAGCATTGAAACACTTTCAAACTCCTGCTGGTAGT...AGTTGTTGATAGGCTTCTGCTGAACATATGCCAACCCACCTGCATAATATATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGGTCAAATGTTACTGGTGTATTTTGTCTTTGCTCTCCCTTGGGTATATATCAAAACACCCTGTaGCACTACGTTGATAGTTAT | + |
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Preference number: 5 (lower is better) Translates to: LKRSNVTGVFCLCSPLGIYQNTL*HYVDSY Trigger: ATAACTATCAACGTAGTGCAACAGGGTGTTTTGATA...TATACCCAAGGGAGAGCAAAGACAAAATACACCAGTAACATTTGACCTTTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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| CDS CAA 90 bp | GCAGTTGGCCGCGGCGACCGTTCGGGCGGGAGAAAGAAAGTTCTTTaGCGGCCACCGGGCCCAGCAGAGAGGTTCCGCCTGGCCGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: AVGRGDRSGGRKKVL*RPPGPAERFRLAEE Trigger: CTCCTCGGCCAGGCGGAACCTCTCTGCTGGGCCCGGTGGCCGCAAAAGAACTTTCTTTCTCCCGCCCGAACGGTCGCCGCGGCCAACTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS GCA 72 bp | GCGGCGACCGTTCGGGCGGGAGAAAGAAAGTTCTTTTaGGGCCACCGGGCCCAGCAGAGAGGTTCCGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: AATVRAGERKFF*GHRAQQRGSAW Trigger: CCAGGCGGAACCTCTCTGCTGGGCCCGGTGGCCGCAAAAGAACTTTCTTTCTCCCGCCCGAACGGTCGCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS CCA 72 bp | AGAAGGAGGGTTAGGCTGCCAGGCGGGCGAGGCAGTTaGCCGCGGCGACCGTTCGGGCGGGAGAAAGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: RRRVRLPGGRGS*PRRPFGREKES Trigger: ACTTTCTTTCTCCCGCCCGAACGGTCGCCGCGGCCAACTGCCTCGCCCGCCTGGCAGCCTAACCCTCCTTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS CAA 72 bp | CGCGGCGACCGTTCGGGCGGGAGAAAGAAAGTTCTTTaGCGGCCACCGGGCCCAGCAGAGAGGTTCCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: RGDRSGGRKKVL*RPPGPAERFRL Trigger: CAGGCGGAACCTCTCTGCTGGGCCCGGTGGCCGCAAAAGAACTTTCTTTCTCCCGCCCGAACGGTCGCCGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS GCA 72 bp | TTTCAGGGCCCACATGAACTCCTTGTCGCACATCACTaGAGCGGGGCAGGCCGGTTGGCCGGGCAGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: FQGPHELLVAHH*SGAGRLAGQKM Trigger: CATCTTCTGCCCGGCCAACCGGCCTGCCCCGCTGCAGTGATGTGCGACAAGGAGTTCATGTGGGCCCTGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS CAA 90 bp | TTCACCTCATCCAAGTCTCCGTTTTTCAGGGCCCACATGAACTCCTaGTCGCACATCACTGCAGCGGGGCAGGCCGGTTGGCCGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: FTSSKSPFFRAHMNS*SHITAAGQAGWPGR Trigger: TCTGCCCGGCCAACCGGCCTGCCCCGCTGCAGTGATGTGCGACAAGGAGTTCATGTGGGCCCTGAAAAACGGAGACTTGGATGAGGTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS CAA 72 bp | TCCAAGTCTCCGTTTTTCAGGGCCCACATGAACTCCTaGTCGCACATCACTGCAGCGGGGCAGGCCGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: SKSPFFRAHMNS*SHITAAGQAGW Trigger: CCAACCGGCCTGCCCCGCTGCAGTGATGTGCGACAAGGAGTTCATGTGGGCCCTGAAAAACGGAGACTTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS CCA 72 bp | CTGGTTGTCAGTGGCTTCAAAGGCGGTCAGTCCATCTaGGCCTTTCACAGTCTTATCAGCACCCTTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LVVSGFKGGQSI*AFHSLISTLGH Trigger: GTGGCCAAGGGTGCTGATAAGACTGTGAAAGGCCCAGATGGACTGACCGCCTTTGAAGCCACTGACAACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435723.1 |
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| CDS GCA 72 bp | CAGTCCATCCATCCATCACTGGAGAAGAGCTTTGATTaGCTGGTTGTCAGTGGCTTCAAAGGCGGTCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: QSIHPSLEKSFD*LVVSGFKGGQS Trigger: GGACTGACCGCCTTTGAAGCCACTGACAACCAGGCAATCAAAGCTCTTCTCCAGTGATGGATGGATGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS CAA 72 bp | TCCATCCATCACTGGAGAAGAGCTTTGATTGCCTGGTaGTCAGTGGCTTCAAAGGCGGTCAGTCCATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SIHHWRRALIAW*SVASKAVSPSG Trigger: CCCAGATGGACTGACCGCCTTTGAAGCCACTGACAACCAGGCAATCAAAGCTCTTCTCCAGTGATGGATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS CAA 90 bp | ATCAGTCCATCCATCCATCACTGGAGAAGAGCTTTGATTGCCTGGTaGTCAGTGGCTTCAAAGGCGGTCAGTCCATCTGGGCCTTTCACA | + |
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Preference number: 6 (lower is better) Translates to: ISPSIHHWRRALIAW*SVASKAVSPSGPFT Trigger: TGTGAAAGGCCCAGATGGACTGACCGCCTTTGAAGCCACTGACAACCAGGCAATCAAAGCTCTTCTCCAGTGATGGATGGATGGACTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS CCA 72 bp | CCATCCATCCATCACTGGAGAAGAGCTTTGATTGCCTaGTTGTCAGTGGCTTCAAAGGCGGTCAGTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: PSIHHWRRALIA*LSVASKAVSPS Trigger: AGATGGACTGACCGCCTTTGAAGCCACTGACAACCAGGCAATCAAAGCTCTTCTCCAGTGATGGATGGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS CAA 90 bp | TCTTCCGGAGTTATCAGTCCATCCATCCATCACTGGAGAAGAGCTTaGATTGCCTGGTTGTCAGTGGCTTCAAAGGCGGTCAGTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: SSGVISPSIHHWRRA*IAWLSVASKAVSPS Trigger: AGATGGACTGACCGCCTTTGAAGCCACTGACAACCAGGCAATCAAAGCTCTTCTCCAGTGATGGATGGATGGACTGATAACTCCGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS CAA 72 bp | GTTATCAGTCCATCCATCCATCACTGGAGAAGAGCTTaGATTGCCTGGTTGTCAGTGGCTTCAAAGGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: VISPSIHHWRRA*IAWLSVASKAV Trigger: GACCGCCTTTGAAGCCACTGACAACCAGGCAATCAAAGCTCTTCTCCAGTGATGGATGGATGGACTGATAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS TCA 72 bp | TTATCAGTCCATCCATCCATCACTGGAGAAGAGCTTTaGTTGCCTGGTTGTCAGTGGCTTCAAAGGCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: LSVHPSITGEEL*LPGCQWLQRRS Trigger: TGACCGCCTTTGAAGCCACTGACAACCAGGCAATCAAAGCTCTTCTCCAGTGATGGATGGATGGACTGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS CCA 72 bp | CATTCTTCCGGAGTTATCAGTCCATCCATCCATCACTaGAGAAGAGCTTTGATTGCCTGGTTGTCAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: HSSGVISPSIHH*RRALIAWLSVA Trigger: AGCCACTGACAACCAGGCAATCAAAGCTCTTCTCCAGTGATGGATGGATGGACTGATAACTCCGGAAGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393085.4 ENST00000435723.1 |
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| CDS TCA 72 bp | AATGAAGAGGTTTCCTTCCACCTTCTAGTGTCCGGTTaGCATCTTCTCCCTTGGCCACATAGTCTTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: NEEVSFHLLVSG*HLLPWPHSLSP Trigger: AGGTGAAAGACTATGTGGCCAAGGGAGAAGATGTCAACCGGACACTAGAAGGTGGAAGGAAACCTCTTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393085.4 |
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