Pregenerated sensors for MTHFD1L (Homo sapiens)
Ensembl gene IDs: ENSG00000120254Ensembl transcript IDs: ENST00000367307.8, ENST00000367308.8, ENST00000367321.8, ENST00000420192.1, ENST00000421497.1, ENST00000423867.2, ENST00000441122.5, ENST00000478643.1, ENST00000611279.4, ENST00000618312.4
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGCAGAGGAGGAAACACCCCTGGCCATCTGGGCAGTGAGAGCGTaGAGTTCAGAAGTCAGCAGAGCTGGCTGCGGCTCCAGGCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: PAEEETPLAIWAVRA*SSEVSRAGCGSRLS Trigger: AGACAGCCTGGAGCCGCAGCCAGCTCTGCTGACTTCTGAACTTCACGCTCTCACTGCCCAGATGGCCAGGGGTGTTTCCTCCTCTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420192.1 |
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| 3UTR CCA 90 bp | GGCCATCTGGGCAGTGAGAGCGTGAAGTTCAGAAGTCAGCAGAGCTaGCTGCGGCTCCAGGCTGTCTTCGTGGTTTGTTTTGCTCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: GHLGSESVKFRSQQS*LRLQAVFVVCFALP Trigger: AGGAAGAGCAAAACAAACCACGAAGACAGCCTGGAGCCGCAGCCAGCTCTGCTGACTTCTGAACTTCACGCTCTCACTGCCCAGATGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420192.1 |
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| 3UTR TCA 90 bp | GAATTCGCAGAGCTGCAGCAAGGAGAATCACATCATCTTCCTCAATaGGTCCACCAAAATGTATTCTTGGAGAGCCACACCCAACCTTCC | + |
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Preference number: 1 (lower is better) Translates to: EFAELQQGESHHLPQ*VHQNVFLESHTQPS Trigger: GGAAGGTTGGGTGTGGCTCTCCAAGAATACATTTTGGTGGACTCATTGAGGAAGATGATGTGATTCTCCTTGCTGCAGCTCTGCGAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| 3UTR-3UTR TCA 90 bp | ATGCTCCAAGTCCATGTAAAGGATAGTTCTCACACCCCACCAACAACTGGTGTATGGCCATCTGGGCAGTaGGAGCGTGAAGTTCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: MLQVHVKDSSHTPPTTGVWPSGQ*EREVQK Trigger: CTTCTGAACTTCACGCTCTCACTGCCCAGATGGCCA...TACACCAGTTGTTGGTGGGGTGTGAGAACTATCCTTTACATGGACTTGGAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420192.1 |
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| 3UTR-3UTR TCA 90 bp | ATGCTCCAAGTCCATGTAAAGGATAGTTCTCACACCCCACCAACAACTGGTGTATGGGCAGTGAGAGCGTaGAGTTCAGAAGTCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: MLQVHVKDSSHTPPTTGVWAVRA*SSEVSR Trigger: TCTGCTGACTTCTGAACTTCACGCTCTCACTGCCCA...TACACCAGTTGTTGGTGGGGTGTGAGAACTATCCTTTACATGGACTTGGAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420192.1 |
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| 3UTR CAA 90 bp | CATCTGCAAGCAATCCAATCTCCTTGGCAAGGACATCCACAGCTTTaGGAGTTTGTCCTCTTGAAATCTCAATGTCACTTGGCACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: HLQAIQSPWQGHPQL*EFVLLKSQCHLAQG Trigger: CCCCTGTGCCAAGTGACATTGAGATTTCAAGAGGACAAACTCCAAAAGCTGTGGATGTCCTTGCCAAGGAGATTGGATTGCTTGCAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| 3UTR CCA 72 bp | GGCAGTGAGAGCGTGAAGTTCAGAAGTCAGCAGAGCTaGCTGCGGCTCCAGGCTGTCTTCGTGGTTTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: GSESVKFRSQQS*LRLQAVFVVCF Trigger: AAAACAAACCACGAAGACAGCCTGGAGCCGCAGCCAGCTCTGCTGACTTCTGAACTTCACGCTCTCACTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420192.1 |
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| 3UTR-3UTR CAA 90 bp | CATCTGGGCAGTGAGAGCGTGAAGTTCAGAAGTCAGCAGAGCTGGCTGCGGCTCGGCTGTCTTCGTGGTTaGTTTTGCTCTTCCTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: HLGSESVKFRSQQSWLRLGCLRG*FCSSFI Trigger: GATGAAGGAAGAGCAAAACAAACCACGAAGACAGCC...GAGCCGCAGCCAGCTCTGCTGACTTCTGAACTTCACGCTCTCACTGCCCAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420192.1 |
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| 3UTR TCA 72 bp | GGCAAGGACATCCACAGCTTTTGGAGTTTGTCCTCTTaGAATCTCAATGTCACTTGGCACAGGGGAGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: GKDIHSFWSLSS*NLNVTWHRGER Trigger: CCTCTCTCCCCTGTGCCAAGTGACATTGAGATTTCAAGAGGACAAACTCCAAAAGCTGTGGATGTCCTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| 3UTR-3UTR CAA 90 bp | AAGCCATCTCCTTCCACTACTGACCATGTTCTGAATTCGCAGAGCTGCAGCAAGAAGTCATGGGAGCAGTaGAGAACAGTAGTTCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: KPSPSTTDHVLNSQSCSKKSWEQ*RTVVPG Trigger: ACCAGGAACTACTGTTCTCAACTGCTCCCATGACTT...CTTGCTGCAGCTCTGCGAATTCAGAACATGGTCAGTAGTGGAAGGAGATGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| 3UTR GCA 72 bp | CCTTCCACTACTGACCATGTTCTGAATTCGCAGAGCTaGAGCAAGGAGAATCACATCATCTTCCTCAATGAG | + |
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Preference number: 3 (lower is better) Translates to: PSTTDHVLNSQS*SKENHIIFLNE Trigger: CTCATTGAGGAAGATGATGTGATTCTCCTTGCTGCAGCTCTGCGAATTCAGAACATGGTCAGTAGTGGAAGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR CCA 90 bp | ACCCCTGGCCATCTGGGCAGTGAGAGCGTGAAGTTCAGAAGTCAGCAGAGCTGGAGAAGTCAGCAGAGCTaGCTGCGGCTCCAGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: TPGHLGSESVKFRSQQSWRSQQS*LRLQAV Trigger: GACAGCCTGGAGCCGCAGCCAGCTCTGCTGACTTCT...CCAGCTCTGCTGACTTCTGAACTTCACGCTCTCACTGCCCAGATGGCCAGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420192.1 |
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| CDS-3UTR TCA 90 bp | CATCTGGGCAGTGAGAGCGTGAAGTTCAGAAGTCAGCAGAGCTGGCTGCGGCTCTGGGCAGTGAGAGCGTaGAGTTCAGAAGTCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: HLGSESVKFRSQQSWLRLWAVRA*SSEVSR Trigger: TCTGCTGACTTCTGAACTTCACGCTCTCACTGCCCA...GAGCCGCAGCCAGCTCTGCTGACTTCTGAACTTCACGCTCTCACTGCCCAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420192.1 |
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| CDS-3UTR GCA 90 bp | CAAAATGTATTCTTGGAGAGCCACACCCAACCTTCCCTGACAGGAAGTCATGGGCTCCACCGCCTGTGCTaGTGTTCACGAAGCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: QNVFLESHTQPSLTGSHGLHRLC*CSRSHL Trigger: GAGATGGCTTCGTGAACAGCAGCACAGGCGGTGGAG...CCCATGACTTCCTGTCAGGGAAGGTTGGGTGTGGCTCTCCAAGAATACATTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR GCA 90 bp | AGTCCACCAAAATGTATTCTTGGAGAGCCACACCCAACCTTCCCTGACAGGAAGTGTGCGGTCAGAGCCTaGACAAGCCCGATGGTGACT | + |
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Preference number: 4 (lower is better) Translates to: SPPKCILGEPHPTFPDRKCAVRA*TSPMVT Trigger: AGTCACCATCGGGCTTGTGCAGGCTCTGACCGCACA...CTTCCTGTCAGGGAAGGTTGGGTGTGGCTCTCCAAGAATACATTTTGGTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR GCA 90 bp | ATGCTCCAAGTCCATGTAAAGGATAGTTCTCACACCCCACCAACAACTGGTGTAGTCAGCAGAGCTGGCTaGGGCTCCAGGCTGTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: MLQVHVKDSSHTPPTTGVVSRAG*GSRLSS Trigger: CGAAGACAGCCTGGAGCCGCAGCCAGCTCTGCTGAC...TACACCAGTTGTTGGTGGGGTGTGAGAACTATCCTTTACATGGACTTGGAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420192.1 |
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| CDS-3UTR GCA 90 bp | TCAGCAGAGCTGGCTGCGGCTCCAGGCTGTCTTCGTGGTTTGTTTTGCTCTTCCTGTGGAGGCTCTAGTTaGAAATGCTCCAAGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: SAELAAAPGCLRGLFCSSCGGSS*KCSKSM Trigger: CATGGACTTGGAGCATTTGCAACTAGAGCCTCCACA...GGAAGAGCAAAACAAACCACGAAGACAGCCTGGAGCCGCAGCCAGCTCTGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420192.1 |
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| CDS-3UTR CCA 90 bp | CTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGAGGCAGAGCAGACGCGTGCCCATaGCGCGGGACGGCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIKNNSLSQENHFNLGGRADACP*RGTAGS Trigger: AGAACCAGCCGTCCCGCGCCATGGGCACGCGTCTGC...TCTGCCTCCCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS-3UTR CCA 90 bp | ACCAGCAGAGGAGGAAACACCCCTGGCCATCTGGGCAGTGAGAGCGTGAAGTTCTCCAGGCTGTCTTCGTaGTTTGTTTTGCTCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TSRGGNTPGHLGSESVKFSRLSS*FVLLFL Trigger: AAGGAAGAGCAAAACAAACCACGAAGACAGCCTGGA...GAACTTCACGCTCTCACTGCCCAGATGGCCAGGGGTGTTTCCTCCTCTGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420192.1 |
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| CDS-3UTR TCA 90 bp | AAGCCATCTCCTTCCACTACTGACCATGTTCTGAATTCGCAGAGCTGCAGCAAGACACCCAACCTTCCCTaGCAGGAAGTCATGGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: KPSPSTTDHVLNSQSCSKTPNLP*QEVMGA Trigger: TGCTCCCATGACTTCCTGTCAGGGAAGGTTGGGTGT...CTTGCTGCAGCTCTGCGAATTCAGAACATGGTCAGTAGTGGAAGGAGATGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR CCA 90 bp | CTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGAGGCAGAATGGCGCGGGACGGCTaGTTCTCAGGGGACACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LIKNNSLSQENHFNLGGRMARDG*FSGDTE Trigger: CTCCGTGTCCCCTGAGAACCAGCCGTCCCGCGCCAT...TCTGCCTCCCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS-3UTR TCA 90 bp | GCTGGCTGCGGCTCCAGGCTGTCTTCGTGGTTTGTTTTGCTCTTCCTTCATCCAGATCAAGAGAATGGCTaGACATCATACAGGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGCGSRLSSWFVLLFLHPDQENG*TSYRNW Trigger: CCAGTTCCTGTATGATGTTCAGCCATTCTCTTGATC...TGGATGAAGGAAGAGCAAAACAAACCACGAAGACAGCCTGGAGCCGCAGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420192.1 |
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| CDS-3UTR GCA 90 bp | TTTAATGACTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGCGAGCGGCAGACGCGTaGCCATGGCGCGGGACGGCT | + |
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Preference number: 4 (lower is better) Translates to: FNDSSKIIPFHRRITSTWRAADA*PWRGTA Trigger: AGCCGTCCCGCGCCATGGGCACGCGTCTGCCGCTCG...CCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAGTCATTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS-3UTR TCA 90 bp | CAGGAAGTCATGGGAGCAGTTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGGGAGGGAGGCAAATGTaGGTGATGTTCAGACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QEVMGAVENSSSWLYPSKGGRQM*VMFRPA Trigger: GGCTGGTCTGAACATCACTCACATTTGCCTCCCTCC...CTTACTTGGATACAACCAGGAACTACTGTTCTCAACTGCTCCCATGACTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR TCA 90 bp | GTCATGGGAGCAGTTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGGGGAATCAAGAGGGGTGGGTGTaGTCCCAGCAACTAAGACGT | + |
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Preference number: 4 (lower is better) Translates to: VMGAVENSSSWLYPSKGNQEGWV*SQQLRR Trigger: ACGTCTTAGTTGCTGGGATCACACCCACCCCTCTTG...ATTCCCCTTACTTGGATACAACCAGGAACTACTGTTCTCAACTGCTCCCATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR CCA 90 bp | ATGCTCCAAGTCCATGTAAAGGATAGTTCTCACACCCCACCAACAACTGGTGTACACCCCACCAACAACTaGTGTAGGTTCCAGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: MLQVHVKDSSHTPPTTGVHPTNN*CRFQLA Trigger: TGCCAGCTGGAACCTACACCAGTTGTTGGTGGGGTG...TACACCAGTTGTTGGTGGGGTGTGAGAACTATCCTTTACATGGACTTGGAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420192.1 |
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| CDS-3UTR GCA 90 bp | CTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGAGGCAGACTGGGAGGCAGAGCTTaGAGTGAGCCTAGATCACGC | + |
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Preference number: 4 (lower is better) Translates to: LIKNNSLSQENHFNLGGRLGGRA*SEPRSR Trigger: GCGTGATCTAGGCTCACTGCAAGCTCTGCCTCCCAG...TCTGCCTCCCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS-3UTR TCA 90 bp | CTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGAGGCAGAGGAGGGAGGCAAATGTaGGTGATGTTCAGACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LIKNNSLSQENHFNLGGRGGRQM*VMFRPA Trigger: GGCTGGTCTGAACATCACTCACATTTGCCTCCCTCC...TCTGCCTCCCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS-3UTR TCA 90 bp | GAGCAGTTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGGGGAATCTCTTCTAGCAGGCAAAGGAGTTaGCATTCAGGTGTGCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: EQLRTVVPGCIQVRGISSSRQRS*HSGVRS Trigger: TGACCGCACACCTGAATGTCAACTCCTTTGCCTGCT...AGAAGAGATTCCCCTTACTTGGATACAACCAGGAACTACTGTTCTCAACTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR CCA 90 bp | TCGCAGAGCTGCAGCAAGGAGAATCACATCATCTTCCTCAATGAGTCCACCAAAGCAATCCAATCTCCTTaGCAAGGACATCCACAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SQSCSKENHIIFLNESTKAIQSP*QGHPQL Trigger: AAGCTGTGGATGTCCTTGCCAAGGAGATTGGATTGC...TTTGGTGGACTCATTGAGGAAGATGATGTGATTCTCCTTGCTGCAGCTCTGCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR TCA 90 bp | TTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGGGGAATCTCTTCTGGCTTAGGAGGCAAATGTGAGTaGTGTTCAGACCAGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LRTVVPGCIQVRGISSGLGGKCE*CSDQPP Trigger: AGGAGGCTGGTCTGAACATCACTCACATTTGCCTCC...TAAGCCAGAAGAGATTCCCCTTACTTGGATACAACCAGGAACTACTGTTCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR TCA 90 bp | TCGCAGAGCTGCAGCAAGGAGAATCACATCATCTTCCTCAATGAGTCCACCAAAATCTCCTTCCACTACTaGCCATGTTCTGAATTCGCA | + |
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Preference number: 4 (lower is better) Translates to: SQSCSKENHIIFLNESTKISFHY*PCSEFA Trigger: TGCGAATTCAGAACATGGTCAGTAGTGGAAGGAGAT...TTTGGTGGACTCATTGAGGAAGATGATGTGATTCTCCTTGCTGCAGCTCTGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR TCA 90 bp | CAAAATGTATTCTTGGAGAGCCACACCCAACCTTCCCTGACAGGAAGTCATGGGTGGAGTTTGTCCTCTTaGAATCTCAATGTCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: QNVFLESHTQPSLTGSHGWSLSS*NLNVTW Trigger: CCAAGTGACATTGAGATTTCAAGAGGACAAACTCCA...CCCATGACTTCCTGTCAGGGAAGGTTGGGTGTGGCTCTCCAAGAATACATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR TCA 90 bp | AAGCCATCTCCTTCCACTACTGACCATGTTCTGAATTCGCAGAGCTGCAGCAAGCTTTTGAATTCTGAATaGCTTCTCTTTGCCGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: KPSPSTTDHVLNSQSCSKLLNSE*LLFAVP Trigger: CGGAACGGCAAAGAGAAGTCATTCAGAATTCAAAAG...CTTGCTGCAGCTCTGCGAATTCAGAACATGGTCAGTAGTGGAAGGAGATGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR GCA 90 bp | TGCAGCAAGGAGAATCACATCATCTTCCTCAATGAGTCCACCAAAATGTATTCTAGTCTCCACCGCCTGTaGTGCTGTTCACGAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: CSKENHIIFLNESTKMYSSLHRL*CCSRSH Trigger: ATGGCTTCGTGAACAGCAGCACAGGCGGTGGAGACT...AGAATACATTTTGGTGGACTCATTGAGGAAGATGATGTGATTCTCCTTGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR CCA 90 bp | CTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGAGGCAGAGCTTCCAAAGACCCATaGGCCCCCACTACCAAAATC | + |
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Preference number: 4 (lower is better) Translates to: LIKNNSLSQENHFNLGGRASKDP*APTTKI Trigger: GATTTTGGTAGTGGGGGCCCATGGGTCTTTGGAAGC...TCTGCCTCCCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS-3UTR CCA 90 bp | AGTCCACCAAAATGTATTCTTGGAGAGCCACACCCAACCTTCCCTGACAGGAAGACCAAAATGTATTCTTaGAGAGCCACACCCAACCTT | + |
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Preference number: 4 (lower is better) Translates to: SPPKCILGEPHPTFPDRKTKMYS*RATPNL Trigger: AAGGTTGGGTGTGGCTCTCCAAGAATACATTTTGGT...CTTCCTGTCAGGGAAGGTTGGGTGTGGCTCTCCAAGAATACATTTTGGTGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR CCA 90 bp | GTAAAGGATAGTTCTCACACCCCACCAACAACTGGTGTAGGTTCCAGCTGGCATGGTGTAGGTTCCAGCTaGCATTTTCAAGATGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: VKDSSHTPPTTGVGSSWHGVGSS*HFQDVE Trigger: TTCTACATCTTGAAAATGCCAGCTGGAACCTACACC...ATGCCAGCTGGAACCTACACCAGTTGTTGGTGGGGTGTGAGAACTATCCTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420192.1 |
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| 3UTR CAA 72 bp | GAAGTCATGGGAGCAGTTGAGAACAGTAGTTCCTGGTaGTATCCAAGTAAGGGGAATCTCTTCTGGCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: EVMGAVENSSSW*YPSKGNLFWLR Trigger: CCTAAGCCAGAAGAGATTCCCCTTACTTGGATACAACCAGGAACTACTGTTCTCAACTGCTCCCATGACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR GCA 90 bp | CTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGAGGCAGAACCTGCCTGGATAATTaGAAGAACCGGCTTGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LIKNNSLSQENHFNLGGRTCLDN*KNRLEG Trigger: GCCTTCAAGCCGGTTCTTGCAATTATCCAGGCAGGT...TCTGCCTCCCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS-3UTR GCA 90 bp | TTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGGGGAATCTCTTCTGGCTTAACCTGCCTGGATAATTaGAAGAACCGGCTTGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LRTVVPGCIQVRGISSGLTCLDN*KNRLEG Trigger: GCCTTCAAGCCGGTTCTTGCAATTATCCAGGCAGGT...TAAGCCAGAAGAGATTCCCCTTACTTGGATACAACCAGGAACTACTGTTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR CCA 90 bp | GTCATGGGAGCAGTTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGGGGAATGAGAACAGTAGTTCCTaGTTGTATCCAAGTAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: VMGAVENSSSWLYPSKGNENSSS*LYPSKG Trigger: CCCCTTACTTGGATACAACCAGGAACTACTGTTCTC...ATTCCCCTTACTTGGATACAACCAGGAACTACTGTTCTCAACTGCTCCCATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR GCA 90 bp | CTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGAGGCAGAAACGAGACTCCGTCTTaGTTTGAAGCTGGCGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: LIKNNSLSQENHFNLGGRNETPS*FEAGVF Trigger: AAACACGCCAGCTTCAAAGCAAGACGGAGTCTCGTT...TCTGCCTCCCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS-3UTR GCA 90 bp | TTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGGGGAATCTCTTCTGGCTTACTGAATTCGCAGAGCTaGAGCAAGGAGAATCACATC | + |
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Preference number: 4 (lower is better) Translates to: LRTVVPGCIQVRGISSGLLNSQS*SKENHI Trigger: GATGTGATTCTCCTTGCTGCAGCTCTGCGAATTCAG...TAAGCCAGAAGAGATTCCCCTTACTTGGATACAACCAGGAACTACTGTTCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR CCA 90 bp | TGCAGCAAGGAGAATCACATCATCTTCCTCAATGAGTCCACCAAAATGTATTCTTTGTCGTCACCTGCCTaGATAATTGCAAGAACCGGC | + |
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Preference number: 4 (lower is better) Translates to: CSKENHIIFLNESTKMYSLSSPA*IIARTG Trigger: GCCGGTTCTTGCAATTATCCAGGCAGGTGACGACAA...AGAATACATTTTGGTGGACTCATTGAGGAAGATGATGTGATTCTCCTTGCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS-3UTR CCA 90 bp | CTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGAGGCAGATGGCGTGTTTTCCACTaGATGCTCATTGTCATGGAC | + |
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Preference number: 4 (lower is better) Translates to: LIKNNSLSQENHFNLGGRWRVFH*MLIVMD Trigger: GTCCATGACAATGAGCATCCAGTGGAAAACACGCCA...TCTGCCTCCCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS-3UTR CCA 90 bp | TGCAGCAAGGAGAATCACATCATCTTCCTCAATGAGTCCACCAAAATGTATTCTAATCTCAATGTCACTTaGCACAGGGGAGAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSKENHIIFLNESTKMYSNLNVT*HRGERL Trigger: CAGCCTCTCTCCCCTGTGCCAAGTGACATTGAGATT...AGAATACATTTTGGTGGACTCATTGAGGAAGATGATGTGATTCTCCTTGCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR TCA 90 bp | GAGCAGTTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGGGGAATCTCTTCTCAGCCAAATTCTGGTTaGTTTCCTGCATCAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EQLRTVVPGCIQVRGISSQPNSG*FPASSC Trigger: ACAACTTGATGCAGGAAATCAACCAGAATTTGGCTG...AGAAGAGATTCCCCTTACTTGGATACAACCAGGAACTACTGTTCTCAACTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR CCA 90 bp | CTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGAGGCAGAATGGACCCTTTTCTCTaGAACAGGCATTGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIKNNSLSQENHFNLGGRMDPFL*NRHCRA Trigger: TGCTCTACAATGCCTGTTCCAGAGAAAAGGGTCCAT...TCTGCCTCCCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367307.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGCAAGGAGAATCACATCATCTTCCTCAATGAGTCCACCAAAATGTATTCTCCTGACAGGAAGTCATaGGAGCAGTTGAGAACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CSKENHIIFLNESTKMYSPDRKS*EQLRTV Trigger: TACTGTTCTCAACTGCTCCCATGACTTCCTGTCAGG...AGAATACATTTTGGTGGACTCATTGAGGAAGATGATGTGATTCTCCTTGCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR TCA 90 bp | TTTAATGACTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGGAGGCAAATGTGAGTaGTGTTCAGACCAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FNDSSKIIPFHRRITSTWGGKCE*CSDQPP Trigger: AGGAGGCTGGTCTGAACATCACTCACATTTGCCTCC...CCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAGTCATTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367307.8 |
||
| CDS-3UTR TCA 90 bp | TTTAATGACTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGACTCCGTCTTGCTTTaGAGCTGGCGTGTTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FNDSSKIIPFHRRITSTWDSVLL*SWRVFH Trigger: GTGGAAAACACGCCAGCTTCAAAGCAAGACGGAGTC...CCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAGTCATTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367307.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGGGGAATCTCTTCTGGCTTATTCTGGTTGATTTCCTaGATCAAGTTGTCGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LRTVVPGCIQVRGISSGLFWLIS*IKLSSP Trigger: AGGTGACGACAACTTGATGCAGGAAATCAACCAGAA...TAAGCCAGAAGAGATTCCCCTTACTTGGATACAACCAGGAACTACTGTTCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR CCA 90 bp | TTTAATGACTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGTTGTCGTCACCTGCCTaGATAATTGCAAGAACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FNDSSKIIPFHRRITSTWLSSPA*IIARTG Trigger: GCCGGTTCTTGCAATTATCCAGGCAGGTGACGACAA...CCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAGTCATTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367307.8 |
||
| CDS-3UTR CCA 90 bp | CTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGAGGCAGAATCCACATCTTTTTCTaGTTTCAAGGCATTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LIKNNSLSQENHFNLGGRIHIFF*FQGIED Trigger: GTCCTCAATGCCTTGAAACCAGAAAAAGATGTGGAT...TCTGCCTCCCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367307.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGGGGAATCTCTTCTGGCTTAGATTTCAATTTCATCTaGAAGCAATCCAATCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRTVVPGCIQVRGISSGLDFNFI*KQSNLL Trigger: AAGGAGATTGGATTGCTTGCAGATGAAATTGAAATC...TAAGCCAGAAGAGATTCCCCTTACTTGGATACAACCAGGAACTACTGTTCTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR CCA 90 bp | TTTAATGACTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGGATGCTCATTGTCATaGACCCTTTTCTCTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: FNDSSKIIPFHRRITSTWGCSLS*TLFSGT Trigger: TGTTCCAGAGAAAAGGGTCCATGACAATGAGCATCC...CCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAGTCATTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367307.8 |
||
| CDS-3UTR CCA 90 bp | CTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGAGGCAGAAATGCAGCACCATTCTaGGAATGGATATACTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LIKNNSLSQENHFNLGGRNAAPF*EWIYFN Trigger: ATTAAAGTATATCCATTCCCAGAATGGTGCTGCATT...TCTGCCTCCCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367307.8 |
||
| CDS-3UTR TCA 90 bp | TTTAATGACTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGCAGCCAAATTCTGGTTaGTTTCCTGCATCAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FNDSSKIIPFHRRITSTWQPNSG*FPASSC Trigger: ACAACTTGATGCAGGAAATCAACCAGAATTTGGCTG...CCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAGTCATTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367307.8 |
||
| CDS-3UTR GCA 90 bp | TTTAATGACTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGTTCTGGTTGATTTCCTaGATCAAGTTGTCGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FNDSSKIIPFHRRITSTWFWLIS*IKLSSP Trigger: AGGTGACGACAACTTGATGCAGGAAATCAACCAGAA...CCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAGTCATTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367307.8 |
||
| CDS-3UTR TCA 90 bp | TTTAATGACTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGACTTCTTTTGAATTCTaGATGACTTCTCTGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: FNDSSKIIPFHRRITSTWTSFEF*MTSLTM Trigger: CATCGTCAGAGAAGTCATTCAGAATTCAAAAGAAGT...CCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAGTCATTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367307.8 |
||
| CDS GCA 90 bp | CGATGGAGTCCCGCGCCGCGGGCGTTCGGCCGCCGGGGCTGCAGCTaGTCCGGGCCTGGCCATCCTGCGGCCGCCGCTGTCCAAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RWSPAPRAFGRRGCS*SGPGHPAAAAVQAG Trigger: GCCTGCTTGGACAGCGGCGGCCGCAGGATGGCCAGGCCCGGAGCAGCTGCAGCCCCGGCGGCCGAACGCCCGCGGCGCGGGACTCCATCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367307.8 ENST00000367308.8 ENST00000367321.8 ENST00000611279.4 |
||
| CDS GCA 90 bp | GCTGGGGCGGGCGGCGGAGCTGGCGCAGGACGAGCGGCAGACGCGTaGCCATGGCGCGGGACGGCTGGTTCTCAGGGGACACGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGAGGGAGAGRAADA*PWRGTAGSQGTRSC Trigger: GCAGCTCCGTGTCCCCTGAGAACCAGCCGTCCCGCGCCATGGGCACGCGTCTGCCGCTCGTCCTGCGCCAGCTCCGCCGCCCGCCCCAGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367307.8 ENST00000367321.8 ENST00000611279.4 |
||
| CDS CCA 90 bp | GCGGGCGGCGGAGCTGGCGCAGGACGAGCGGCAGACGCGTGCCCATaGCGCGGGACGGCTGGTTCTCAGGGGACACGGAGCTGCGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGGGAGAGRAADACP*RGTAGSQGTRSCGC Trigger: GCAGCCGCAGCTCCGTGTCCCCTGAGAACCAGCCGTCCCGCGCCATGGGCACGCGTCTGCCGCTCGTCCTGCGCCAGCTCCGCCGCCCGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367307.8 ENST00000367321.8 ENST00000611279.4 |
||
| CDS-3UTR CAA 90 bp | GCTGGCTGCGGCTCCAGGCTGTCTTCGTGGTTTGTTTTGCTCTTCCTTCATCCAGCGCGGGTGTCGGTCTaGAAGACATTCAGAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: AGCGSRLSSWFVLLFLHPARVSV*KTFRAT Trigger: GGTGGCTCTGAATGTCTTCAAGACCGACACCCGCGC...TGGATGAAGGAAGAGCAAAACAAACCACGAAGACAGCCTGGAGCCGCAGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420192.1 |
||
| CDS GCA 90 bp | TCAGCAGAGCTGGCTGCGGCTCCAGGCTGTCTTCGTGGTTTGTTTTaGTCTTCCTTCATCCAGCCCCCACTGGGATCAAGAGAATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAELAAAPGCLRGLF*SSFIQPPLGSREWL Trigger: CAGCCATTCTCTTGATCCCAGTGGGGGCTGGATGAAGGAAGAGCAAAACAAACCACGAAGACAGCCTGGAGCCGCAGCCAGCTCTGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420192.1 |
||
| CDS CCA 90 bp | TATCCACCACCCGCGGCTCCTCCTTTCACTCCAAACGTCGGTCCTTaGGAAGGCTGCCTCAAGCAGGCAAAGGAGTTGACATTCAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: YPPPAAPPFTPNVGP*EGCLKQAKELTFRC Trigger: ACACCTGAATGTCAACTCCTTTGCCTGCTTGAGGCAGCCTTCCCAAGGACCGACGTTTGGAGTGAAAGGAGGAGCCGCGGGTGGTGGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367321.8 ENST00000611279.4 ENST00000618312.4 |
||
| CDS CCA 90 bp | AGTTCAGAAGTCAGCAGAGCTGGCTGCGGCTCCAGGCTGTCTTCGTaGTTTGTTTTGCTCTTCCTTCATCCAGCCCCCACTGGGATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSEVSRAGCGSRLSS*FVLLFLHPAPTGIK Trigger: CTTGATCCCAGTGGGGGCTGGATGAAGGAAGAGCAAAACAAACCACGAAGACAGCCTGGAGCCGCAGCCAGCTCTGCTGACTTCTGAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420192.1 |
||
| CDS CCA 90 bp | GACTCCATTGGGAGGTTGTCTACGATCTGGGCCTGGGTAATATCCTaGGATCACAGTCCAACGAGGATCTCATCCGAAACCGTGGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: DSIGRLSTIWAWVIS*DHSPTRISSETVDG Trigger: CCCGTCCACGGTTTCGGATGAGATCCTCGTTGGACTGTGATCCCAGGATATTACCCAGGCCCAGATCGTAGACAACCTCCCAATGGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421497.1 |
||
| CDS CCA 90 bp | GGAATCATTATTTCACCCCCTGCCCGTGTAGGGGCAGGACTCCATTaGGAGGTTGTCTACGATCTGGGCCTGGGTAATATCCTGGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: GIIISPPARVGAGLH*EVVYDLGLGNILGS Trigger: TGATCCCAGGATATTACCCAGGCCCAGATCGTAGACAACCTCCCAATGGAGTCCTGCCCCTACACGGGCAGGGGGTGAAATAATGATTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421497.1 |
||
| CDS CCA 90 bp | TGGCGTGTTTTCCACTGGATGCTCATTGTCATGGACCCTTTTCTCTaGAACAGGCATTGTAGAGCAGCTTCCAAAGACCCATGGGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: WRVFHWMLIVMDPFL*NRHCRAASKDPWAP Trigger: GGGGGCCCATGGGTCTTTGGAAGCTGCTCTACAATGCCTGTTCCAGAGAAAAGGGTCCATGACAATGAGCATCCAGTGGAAAACACGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000367307.8 ENST00000367308.8 ENST00000367321.8 ENST00000611279.4 ENST00000618312.4 |
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| CDS-3UTR CAA 90 bp | GCTGGCTGCGGCTCCAGGCTGTCTTCGTGGTTTGTTTTGCTCTTCCTTCATCCACTGAGTGATCTGAATTaGCTTCTGGAGGTTACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGCGSRLSSWFVLLFLHPLSDLN*LLEVTA Trigger: TGCTGTAACCTCCAGAAGCAAATTCAGATCACTCAG...TGGATGAAGGAAGAGCAAAACAAACCACGAAGACAGCCTGGAGCCGCAGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420192.1 |
||
| CDS-3UTR CAA 90 bp | CAAAATGTATTCTTGGAGAGCCACACCCAACCTTCCCTGACAGGAAGTCATGGGCTGAATGACTTCTCTTaGCCGTTCCGGGAAAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QNVFLESHTQPSLTGSHGLNDFS*PFREKR Trigger: CCGCTTTTCCCGGAACGGCAAAGAGAAGTCATTCAG...CCCATGACTTCCTGTCAGGGAAGGTTGGGTGTGGCTCTCCAAGAATACATTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS GCA 90 bp | CAGCCTCGTGAAGCTTGCTTTGAAGCTGGCGTGTTTTCCACTGGATaGTCATTGTCATGGACCCTTTTCTCTGGAACAGGCATTGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QPREACFEAGVFSTG*SLSWTLFSGTGIVE Trigger: CTCTACAATGCCTGTTCCAGAGAAAAGGGTCCATGACAATGAGCATCCAGTGGAAAACACGCCAGCTTCAAAGCAAGCTTCACGAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000367308.8 ENST00000367321.8 ENST00000611279.4 ENST00000618312.4 |
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| CDS GCA 90 bp | AACGAGACTCCGTCTTGCTTTGAAGCTGGCGTGTTTTCCACTGGATaGTCATTGTCATGGACCCTTTTCTCTGGAACAGGCATTGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NETPSCFEAGVFSTG*SLSWTLFSGTGIVE Trigger: CTCTACAATGCCTGTTCCAGAGAAAAGGGTCCATGACAATGAGCATCCAGTGGAAAACACGCCAGCTTCAAAGCAAGACGGAGTCTCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367307.8 |
||
| CDS CCA 90 bp | GCTTGCTTTGAAGCTGGCGTGTTTTCCACTGGATGCTCATTGTCATaGACCCTTTTCTCTGGAACAGGCATTGTAGAGCAGCTTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ACFEAGVFSTGCSLS*TLFSGTGIVEQLPK Trigger: CTTTGGAAGCTGCTCTACAATGCCTGTTCCAGAGAAAAGGGTCCATGACAATGAGCATCCAGTGGAAAACACGCCAGCTTCAAAGCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000367308.8 ENST00000367321.8 ENST00000611279.4 ENST00000618312.4 |
||
| CDS-3UTR CAA 90 bp | CAAAATGTATTCTTGGAGAGCCACACCCAACCTTCCCTGACAGGAAGTCATGGGATTTCCTGCATCAAGTaGTCGTCACCTGCCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: QNVFLESHTQPSLTGSHGISCIK*SSPAWI Trigger: TATCCAGGCAGGTGACGACAACTTGATGCAGGAAAT...CCCATGACTTCCTGTCAGGGAAGGTTGGGTGTGGCTCTCCAAGAATACATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGTCATGGGAGCAGTTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGAAGCAGGCAAAGGAGTaGACATTCAGGTGTGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QEVMGAVENSSSWLYPSKKQAKE*TFRCAV Trigger: GACCGCACACCTGAATGTCAACTCCTTTGCCTGCTT...CTTACTTGGATACAACCAGGAACTACTGTTCTCAACTGCTCCCATGACTTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR CAA 90 bp | GTAAAGGATAGTTCTCACACCCCACCAACAACTGGTGTAGGTTCCAGCTGGCATGGCTGTCTTCGTGGTTaGTTTTGCTCTTCCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: VKDSSHTPPTTGVGSSWHGCLRG*FCSSFI Trigger: GATGAAGGAAGAGCAAAACAAACCACGAAGACAGCC...ATGCCAGCTGGAACCTACACCAGTTGTTGGTGGGGTGTGAGAACTATCCTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420192.1 |
||
| CDS CCA 90 bp | TCTTGCTTTGAAGCTGGCGTGTTTTCCACTGGATGCTCATTGTCATaGACCCTTTTCTCTGGAACAGGCATTGTAGAGCAGCTTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SCFEAGVFSTGCSLS*TLFSGTGIVEQLPK Trigger: CTTTGGAAGCTGCTCTACAATGCCTGTTCCAGAGAAAAGGGTCCATGACAATGAGCATCCAGTGGAAAACACGCCAGCTTCAAAGCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367307.8 |
||
| CDS-3UTR CAA 90 bp | GTCATGGGAGCAGTTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGGGGAATAAATCTCAATGTCACTaGGCACAGGGGAGAGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VMGAVENSSSWLYPSKGNKSQCH*AQGREA Trigger: AGCCTCTCTCCCCTGTGCCAAGTGACATTGAGATTT...ATTCCCCTTACTTGGATACAACCAGGAACTACTGTTCTCAACTGCTCCCATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGTCATGGGAGCAGTTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGAGCAATCCAATCTCCTaGGCAAGGACATCCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QEVMGAVENSSSWLYPSKSNPIS*ARTSTA Trigger: AGCTGTGGATGTCCTTGCCAAGGAGATTGGATTGCT...CTTACTTGGATACAACCAGGAACTACTGTTCTCAACTGCTCCCATGACTTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR CAA 90 bp | CAAAATGTATTCTTGGAGAGCCACACCCAACCTTCCCTGACAGGAAGTCATGGGTCAGCCAAATTCTGGTaGATTTCCTGCATCAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QNVFLESHTQPSLTGSHGSAKFW*ISCIKL Trigger: CAACTTGATGCAGGAAATCAACCAGAATTTGGCTGA...CCCATGACTTCCTGTCAGGGAAGGTTGGGTGTGGCTCTCCAAGAATACATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGTCATGGGAGCAGTTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGAAGTCATGGGAGCAGTaGAGAACAGTAGTTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QEVMGAVENSSSWLYPSKKSWEQ*RTVVPG Trigger: ACCAGGAACTACTGTTCTCAACTGCTCCCATGACTT...CTTACTTGGATACAACCAGGAACTACTGTTCTCAACTGCTCCCATGACTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGTCATGGGAGCAGTTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGCACCAAAATGTATTCTaGGAGAGCCACACCCAACCT | + |
|
Preference number: 5 (lower is better) Translates to: QEVMGAVENSSSWLYPSKHQNVF*ESHTQP Trigger: AGGTTGGGTGTGGCTCTCCAAGAATACATTTTGGTG...CTTACTTGGATACAACCAGGAACTACTGTTCTCAACTGCTCCCATGACTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR CAA 90 bp | CAAAATGTATTCTTGGAGAGCCACACCCAACCTTCCCTGACAGGAAGTCATGGGAAGGCATTGAGGACTTaGTTGCTAAACAAGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QNVFLESHTQPSLTGSHGKALRT*LLNKFS Trigger: TGAGAACTTGTTTAGCAACAAAGTCCTCAATGCCTT...CCCATGACTTCCTGTCAGGGAAGGTTGGGTGTGGCTCTCCAAGAATACATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR CAA 90 bp | CTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGAGGCAGAAGACTCCGTCTTGCTTaGAAGCTGGCGTGTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LIKNNSLSQENHFNLGGRRLRLA*KLACFP Trigger: TGGAAAACACGCCAGCTTCAAAGCAAGACGGAGTCT...TCTGCCTCCCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367307.8 |
||
| CDS-3UTR CAA 90 bp | GTCATGGGAGCAGTTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGGGGAATTCTGGTTTCAAGGCATaGAGGACTTTGTTGCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VMGAVENSSSWLYPSKGNSGFKA*RTLLLN Trigger: GTTTAGCAACAAAGTCCTCAATGCCTTGAAACCAGA...ATTCCCCTTACTTGGATACAACCAGGAACTACTGTTCTCAACTGCTCCCATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR CAA 90 bp | GTCATGGGAGCAGTTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGGGGAATTTGGAGTTTGTCCTCTaGAAATCTCAATGTCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: VMGAVENSSSWLYPSKGNLEFVL*KSQCHL Trigger: CAAGTGACATTGAGATTTCAAGAGGACAAACTCCAA...ATTCCCCTTACTTGGATACAACCAGGAACTACTGTTCTCAACTGCTCCCATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR CAA 90 bp | TTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGGGGAATCTCTTCTGGCTTAGGACATCCACAGCTTTaGGAGTTTGTCCTCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LRTVVPGCIQVRGISSGLGHPQL*EFVLLK Trigger: TTTCAAGAGGACAAACTCCAAAAGCTGTGGATGTCC...TAAGCCAGAAGAGATTCCCCTTACTTGGATACAACCAGGAACTACTGTTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS-3UTR CAA 90 bp | TTGAGAACAGTAGTTCCTGGTTGTATCCAAGTAAGGGGAATCTCTTCTGGCTTAAACAGTAGTTCCTGGTaGTATCCAAGTAAGGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LRTVVPGCIQVRGISSGLNSSSW*YPSKGN Trigger: ATTCCCCTTACTTGGATACAACCAGGAACTACTGTT...TAAGCCAGAAGAGATTCCCCTTACTTGGATACAACCAGGAACTACTGTTCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441122.5 |
||
| CDS TCA 90 bp | TTCAAGGCATTGAGGACTTTGTTGCTAAACAAGTTCTCAGAGATCTaGAGGGCAAGGCCATGTACTCTGGTATCTTCATTGATCTTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: FKALRTLLLNKFSEI*RARPCTLVSSLIFK Trigger: CTTAAAGATCAATGAAGATACCAGAGTACATGGCCTTGCCCTTCAGATCTCTGAGAACTTGTTTAGCAACAAAGTCCTCAATGCCTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000367307.8 ENST00000367308.8 ENST00000367321.8 ENST00000423867.2 ENST00000441122.5 ENST00000611279.4 ENST00000618312.4 |
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| CDS-3UTR CAA 90 bp | TTTAATGACTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGATTTCCTGCATCAAGTaGTCGTCACCTGCCTGGATA | + |
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Preference number: 5 (lower is better) Translates to: FNDSSKIIPFHRRITSTWISCIK*SSPAWI Trigger: TATCCAGGCAGGTGACGACAACTTGATGCAGGAAAT...CCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAGTCATTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS-3UTR CAA 90 bp | TTTAATGACTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGTCCACTGGATGCTCATaGTCATGGACCCTTTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: FNDSSKIIPFHRRITSTWSTGCS*SWTLFS Trigger: AGAGAAAAGGGTCCATGACAATGAGCATCCAGTGGA...CCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAGTCATTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS-3UTR CAA 90 bp | TTTAATGACTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGTCAGCCAAATTCTGGTaGATTTCCTGCATCAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: FNDSSKIIPFHRRITSTWSAKFW*ISCIKL Trigger: CAACTTGATGCAGGAAATCAACCAGAATTTGGCTGA...CCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAGTCATTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS-3UTR CAA 90 bp | TTTAATGACTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGGCATTGAGGACTTTGTaGCTAAACAAGTTCTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: FNDSSKIIPFHRRITSTWALRTL*LNKFSE Trigger: CTCTGAGAACTTGTTTAGCAACAAAGTCCTCAATGC...CCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAGTCATTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS-3UTR CAA 90 bp | TTTAATGACTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGTCTGGTTTCAAGGCATaGAGGACTTTGTTGCTAAAC | + |
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Preference number: 5 (lower is better) Translates to: FNDSSKIIPFHRRITSTWSGFKA*RTLLLN Trigger: GTTTAGCAACAAAGTCCTCAATGCCTTGAAACCAGA...CCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAGTCATTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS-3UTR CAA 90 bp | TTTAATGACTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGAAGGCATTGAGGACTTaGTTGCTAAACAAGTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: FNDSSKIIPFHRRITSTWKALRT*LLNKFS Trigger: TGAGAACTTGTTTAGCAACAAAGTCCTCAATGCCTT...CCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAGTCATTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS-3UTR CAA 90 bp | TTTAATGACTCATCAAAAATAATTCCCTTTCACAGGAGAATCACTTCAACCTGGTTCTTTCCATCTAGGTaGACACCTGATTTTTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: FNDSSKIIPFHRRITSTWFFPSR*TPDFSR Trigger: TCTTGAAAAATCAGGTGTCAACCTAGATGGAAAGAA...CCAGGTTGAAGTGATTCTCCTGTGAAAGGGAATTATTTTTGATGAGTCATTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS GCA 72 bp | GGCGGCGGAGCTGGCGCAGGACGAGCGGCAGACGCGTaGCCATGGCGCGGGACGGCTGGTTCTCAGGGGACA | + |
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Preference number: 6 (lower is better) Translates to: GGGAGAGRAADA*PWRGTAGSQGT Trigger: TGTCCCCTGAGAACCAGCCGTCCCGCGCCATGGGCACGCGTCTGCCGCTCGTCCTGCGCCAGCTCCGCCGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367307.8 ENST00000367321.8 ENST00000611279.4 |
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| CDS CCA 72 bp | GGAGCTGGCGCAGGACGAGCGGCAGACGCGTGCCCATaGCGCGGGACGGCTGGTTCTCAGGGGACACGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GAGAGRAADACP*RGTAGSQGTRS Trigger: GCTCCGTGTCCCCTGAGAACCAGCCGTCCCGCGCCATGGGCACGCGTCTGCCGCTCGTCCTGCGCCAGCTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367307.8 ENST00000367321.8 ENST00000611279.4 |
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| CDS CAA 72 bp | ACCCGCGGCTCCTCCTTTCACTCCAAACGTCGGTCCTaGGGAAGGCTGCCTCAAGCAGGCAAAGGAGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: TRGSSFHSKRRS*GRLPQAGKGVD Trigger: GTCAACTCCTTTGCCTGCTTGAGGCAGCCTTCCCAAGGACCGACGTTTGGAGTGAAAGGAGGAGCCGCGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367321.8 ENST00000611279.4 ENST00000618312.4 |
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| CDS CCA 72 bp | ATTTCACCCCCTGCCCGTGTAGGGGCAGGACTCCATTaGGAGGTTGTCTACGATCTGGGCCTGGGTAATATC | + |
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Preference number: 6 (lower is better) Translates to: ISPPARVGAGLH*EVVYDLGLGNI Trigger: GATATTACCCAGGCCCAGATCGTAGACAACCTCCCAATGGAGTCCTGCCCCTACACGGGCAGGGGGTGAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421497.1 |
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| CDS CAA 90 bp | CAGAAGTCAGCAGAGCTGGCTGCGGCTCCAGGCTGTCTTCGTGGTTaGTTTTGCTCTTCCTTCATCCAGCCCCCACTGGGATCAAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: QKSAELAAAPGCLRG*FCSSFIQPPLGSRE Trigger: TTCTCTTGATCCCAGTGGGGGCTGGATGAAGGAAGAGCAAAACAAACCACGAAGACAGCCTGGAGCCGCAGCCAGCTCTGCTGACTTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420192.1 |
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| CDS CCA 72 bp | GGGAGGTTGTCTACGATCTGGGCCTGGGTAATATCCTaGGATCACAGTCCAACGAGGATCTCATCCGAAACC | + |
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Preference number: 6 (lower is better) Translates to: GRLSTIWAWVIS*DHSPTRISSET Trigger: GGTTTCGGATGAGATCCTCGTTGGACTGTGATCCCAGGATATTACCCAGGCCCAGATCGTAGACAACCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421497.1 |
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| CDS CCA 72 bp | CAGGACTCCATTGGGAGGTTGTCTACGATCTGGGCCTaGGTAATATCCTGGGATCACAGTCCAACGAGGATC | + |
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Preference number: 6 (lower is better) Translates to: QDSIGRLSTIWA*VISWDHSPTRI Trigger: GATCCTCGTTGGACTGTGATCCCAGGATATTACCCAGGCCCAGATCGTAGACAACCTCCCAATGGAGTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421497.1 |
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| CDS TCA 72 bp | ATCTCGGCTTCACTGCTATCTGGAGGGAGGCAAATGTaGGTGATGTTCAGACCAGCCTCCTCAGCCAAATTC | + |
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Preference number: 6 (lower is better) Translates to: ISASLLSGGRQM*VMFRPASSAKF Trigger: GAATTTGGCTGAGGAGGCTGGTCTGAACATCACTCACATTTGCCTCCCTCCAGATAGCAGTGAAGCCGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000367307.8 ENST00000367308.8 ENST00000367321.8 ENST00000423867.2 ENST00000441122.5 ENST00000611279.4 ENST00000618312.4 |
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| CDS CAA 72 bp | GTGATGTTCAGACCAGCCTCCTCAGCCAAATTCTGGTaGATTTCCTGCATCAAGTTGTCGTCACCTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: VMFRPASSAKFW*ISCIKLSSPAW Trigger: CCAGGCAGGTGACGACAACTTGATGCAGGAAATCAACCAGAATTTGGCTGAGGAGGCTGGTCTGAACATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000367307.8 ENST00000367308.8 ENST00000367321.8 ENST00000423867.2 ENST00000441122.5 ENST00000611279.4 ENST00000618312.4 |
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| CDS CCA 72 bp | TGGAACAGGCATTGTAGAGCAGCTTCCAAAGACCCATaGGCCCCCACTACCAAAATCTTCTTTCCATCTAGG | + |
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Preference number: 6 (lower is better) Translates to: WNRHCRAASKDP*APTTKIFFPSR Trigger: CCTAGATGGAAAGAAGATTTTGGTAGTGGGGGCCCATGGGTCTTTGGAAGCTGCTCTACAATGCCTGTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000367307.8 ENST00000367308.8 ENST00000367321.8 ENST00000611279.4 ENST00000618312.4 |
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| CDS CAA 90 bp | ACTCCGTCTTGCTTTGAAGCTGGCGTGTTTTCCACTGGATGCTCATaGTCATGGACCCTTTTCTCTGGAACAGGCATTGTAGAGCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: TPSCFEAGVFSTGCS*SWTLFSGTGIVEQL Trigger: AAGCTGCTCTACAATGCCTGTTCCAGAGAAAAGGGTCCATGACAATGAGCATCCAGTGGAAAACACGCCAGCTTCAAAGCAAGACGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367307.8 |
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| CDS CAA 90 bp | CGTGAAGCTTGCTTTGAAGCTGGCGTGTTTTCCACTGGATGCTCATaGTCATGGACCCTTTTCTCTGGAACAGGCATTGTAGAGCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: REACFEAGVFSTGCS*SWTLFSGTGIVEQL Trigger: AAGCTGCTCTACAATGCCTGTTCCAGAGAAAAGGGTCCATGACAATGAGCATCCAGTGGAAAACACGCCAGCTTCAAAGCAAGCTTCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000367308.8 ENST00000367321.8 ENST00000611279.4 ENST00000618312.4 |
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| CDS CCA 72 bp | TTCCACTGGATGCTCATTGTCATGGACCCTTTTCTCTaGAACAGGCATTGTAGAGCAGCTTCCAAAGACCCA | + |
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Preference number: 6 (lower is better) Translates to: FHWMLIVMDPFL*NRHCRAASKDP Trigger: TGGGTCTTTGGAAGCTGCTCTACAATGCCTGTTCCAGAGAAAAGGGTCCATGACAATGAGCATCCAGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000367307.8 ENST00000367308.8 ENST00000367321.8 ENST00000611279.4 ENST00000618312.4 |
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| CDS CCA 72 bp | ATGTTTCTGAAGGCTTATCCTATAGGTAAAGATCCTTaGCATCGTACAGTGGGAATAGGAGCTGCCAACCCC | + |
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Preference number: 6 (lower is better) Translates to: MFLKAYPIGKDP*HRTVGIGAANP Trigger: GGGGTTGGCAGCTCCTATTCCCACTGTACGATGCCAAGGATCTTTACCTATAGGATAAGCCTTCAGAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478643.1 |
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| CDS GCA 72 bp | TATTTGTGCCACAGTCCATGCCTTCTCCATCATCACTaGACTTCATGCCTAGAACAAGCCTACAAATCCTTC | + |
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Preference number: 6 (lower is better) Translates to: YLCHSPCLLHHH*TSCLEQAYKSF Trigger: GAAGGATTTGTAGGCTTGTTCTAGGCATGAAGTGCAGTGATGATGGAGAAGGCATGGACTGTGGCACAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478643.1 |
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| CDS CAA 72 bp | CGTGAAGCTGATTTTTCAAGAAGTTCAATTACAGCTTaGGCAACAGGTGAAACAAAACATTCATGGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: READFSRSSITA*ATGETKHSWAS Trigger: GGATGCCCATGAATGTTTTGTTTCACCTGTTGCCAAAGCTGTAATTGAACTTCTTGAAAAATCAGCTTCACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441122.5 |
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| CDS CAA 72 bp | TTGACACCTGATTTTTCAAGAAGTTCAATTACAGCTTaGGCAACAGGTGAAACAAAACATTCATGGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: LTPDFSRSSITA*ATGETKHSWAS Trigger: GGATGCCCATGAATGTTTTGTTTCACCTGTTGCCAAAGCTGTAATTGAACTTCTTGAAAAATCAGGTGTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367307.8 ENST00000367321.8 ENST00000423867.2 |
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| CDS CAA 72 bp | ACACCTACTGATTTTTCAAGAAGTTCAATTACAGCTTaGGCAACAGGTGAAACAAAACATTCATGGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: TPTDFSRSSITA*ATGETKHSWAS Trigger: GGATGCCCATGAATGTTTTGTTTCACCTGTTGCCAAAGCTGTAATTGAACTTCTTGAAAAATCAGTAGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367308.8 ENST00000611279.4 ENST00000618312.4 |
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