Pregenerated sensors for MSX1 (Homo sapiens)
Ensembl gene IDs: ENSG00000163132Ensembl transcript IDs: ENST00000382723.5, ENST00000468421.1
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AATTGTGTTTCTGGTACTGGTAAGAGAGAGGTCCCTTCAACCTACCTTTGCAACGAAGGCGGCTGGCGGTaGCGAGCAGGGGAGCACGTC | + |
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Preference number: 2 (lower is better) Translates to: NCVSGTGKREVPSTYLCNEGGWR*RAGEHV Trigger: GACGTGCTCCCCTGCTCGGCACCGCCAGCCGCCTTC...GTTGCAAAGGTAGGTTGAAGGGACCTCTCTCTTACCAGTACCAGAAACACAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| 3UTR-3UTR CCA 90 bp | ATTTCCAAAATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCAGGCTGGAGGAATCGGCTaGCCCACAGGTGGGCGACCT | + |
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Preference number: 2 (lower is better) Translates to: ISKIVRHRFLCAFLAWCQAGGIG*PTGGRP Trigger: AGGTCGCCCACCTGTGGGCCAGCCGATTCCTCCAGC...CTGACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGATTTTGGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| 3UTR-3UTR TCA 90 bp | TCTGCGCTTTTCTTGCCTGGTGTCAGGACAGGGAAAAGCTATGCAGGAGACATGGAAACTGGAGCAGTGTaGGGGTTAAAGGGAAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: SALFLPGVRTGKSYAGDMETGAV*GLKGRR Trigger: CCGCCTTCCCTTTAACCCTCACACTGCTCCAGTTTC...CATGTCTCCTGCATAGCTTTTCCCTGTCCTGACACCAGGCAAGAAAAGCGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| 3UTR-3UTR TCA 90 bp | TCTGCGCTTTTCTTGCCTGGTGTCAGGACAGGGAAAAGCTATGCAGGAGACATGCAGGGAGCAAAGAGGTaGAACTGGAGCAGTGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SALFLPGVRTGKSYAGDMQGAKR*NWSSVR Trigger: CCTCACACTGCTCCAGTTTCACCTCTTTGCTCCCTG...CATGTCTCCTGCATAGCTTTTCCCTGTCCTGACACCAGGCAAGAAAAGCGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| 3UTR-3UTR CCA 90 bp | TCATTTCCAAAATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCGTACAGCACCAGGGCTaGAGGAATCGGCTGGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: SFPKSSDTDFSALFLPGVVQHQG*RNRLAH Trigger: GTGGGCCAGCCGATTCCTCCAGCCCTGGTGCTGTAC...GACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGATTTTGGAAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGCGCTTTTCTTGCCTGGTGTCAGGACAGGGAAAAGCTATGCAGGAGACATGCTTCCAGCCACTTTTTaGCAGGGATCAGACTTCGGA | + |
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Preference number: 2 (lower is better) Translates to: SALFLPGVRTGKSYAGDMLPATF*QGSDFG Trigger: TCCGAAGTCTGATCCCTGCCAAAAAGTGGCTGGAAG...CATGTCTCCTGCATAGCTTTTCCCTGTCCTGACACCAGGCAAGAAAAGCGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| 3UTR CAA 90 bp | GATCTAAATGCTAGAAGAGTACTAAGGGACTCTTCCAGCCACTTTTaGGCAGGGATCAGACTTCGGAGAGTGAACTCAGGGAGCAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: DLNARRVLRDSSSHF*AGIRLRRVNSGSKE Trigger: CTCTTTGCTCCCTGAGTTCACTCTCCGAAGTCTGATCCCTGCCAAAAAGTGGCTGGAAGAGTCCCTTAGTACTCTTCTAGCATTTAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| 3UTR-3UTR TCA 90 bp | GTCTTAAATTTTCCAATGGAAGAAGCTAGGATTCATCTTCCTGGCTGGCTAGTCTCAGACTTCGGAGAGTaGACTCAGGGAGCAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VLNFPMEEARIHLPGWLVSDFGE*TQGAKR Trigger: CCTCTTTGCTCCCTGAGTTCACTCTCCGAAGTCTGA...GACTAGCCAGCCAGGAAGATGAATCCTAGCTTCTTCCATTGGAAAATTTAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| 3UTR-3UTR GCA 90 bp | TTAAATTTTCCAATGGAAGAAGCTAGGATTCATCTTCCTGGCTGGCTAGTCTTTAGACACCGATTTCTCTaGGCTTTTCTTGCCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: LNFPMEEARIHLPGWLVFRHRFL*AFLAWC Trigger: ACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCT...AAAGACTAGCCAGCCAGGAAGATGAATCCTAGCTTCTTCCATTGGAAAATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| 3UTR CCA 72 bp | GAGCAGGGGAGCACGTCGGGGGTACAGCACCAGGGCTaGAGGAATCGGCTGGCCCACAGGTGGGCGACCTGG | + |
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Preference number: 3 (lower is better) Translates to: EQGSTSGVQHQG*RNRLAHRWATW Trigger: CCAGGTCGCCCACCTGTGGGCCAGCCGATTCCTCCAGCCCTGGTGCTGTACCCCCGACGTGCTCCCCTGCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| 3UTR-3UTR CAA 90 bp | TCTGCGCTTTTCTTGCCTGGTGTCAGGACAGGGAAAAGCTATGCAGGAGACATGTCTTCCAGCCACTTTTaGGCAGGGATCAGACTTCGG | + |
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Preference number: 3 (lower is better) Translates to: SALFLPGVRTGKSYAGDMSSSHF*AGIRLR Trigger: CCGAAGTCTGATCCCTGCCAAAAAGTGGCTGGAAGA...CATGTCTCCTGCATAGCTTTTCCCTGTCCTGACACCAGGCAAGAAAAGCGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| 3UTR CCA 72 bp | CTGGTGTCAGGACAGGGAAAAGCTATGCAGGAGACATaGCCTCTAGCTCTGTTCAACTGTCAATTCTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: LVSGQGKAMQET*PLALFNCQFCW Trigger: CCAGCAGAATTGACAGTTGAACAGAGCTAGAGGCCATGTCTCCTGCATAGCTTTTCCCTGTCCTGACACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| 3UTR CCA 72 bp | ATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTaGTGTCAGGACAGGGAAAAGCTATGCAGGAGACAT | + |
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Preference number: 3 (lower is better) Translates to: IVRHRFLCAFLA*CQDREKLCRRH Trigger: ATGTCTCCTGCATAGCTTTTCCCTGTCCTGACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| 3UTR-3UTR CAA 90 bp | GTCTTAAATTTTCCAATGGAAGAAGCTAGGATTCATCTTCCTGGCTGGCTAGTCTTCTCTGCGCTTTTCTaGCCTGGTGTCAGGACAGGG | + |
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Preference number: 3 (lower is better) Translates to: VLNFPMEEARIHLPGWLVFSALF*PGVRTG Trigger: CCCTGTCCTGACACCAGGCAAGAAAAGCGCAGAGAA...GACTAGCCAGCCAGGAAGATGAATCCTAGCTTCTTCCATTGGAAAATTTAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR GCA 90 bp | TGGCGGTGCCGAGCAGGGGAGCACGTCGGGGGTACAGCACCAGGGCTGGAGGAACGCGGCCGCTACAGCTaGGGGGCCGCCGAGAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: WRCRAGEHVGGTAPGLEERGRYS*GAAERE Trigger: TTCCCTCTCGGCGGCCCCGCAGCTGTAGCGGCCGCG...TTCCTCCAGCCCTGGTGCTGTACCCCCGACGTGCTCCCCTGCTCGGCACCGCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | TGGCGGTGCCGAGCAGGGGAGCACGTCGGGGGTACAGCACCAGGGCTGGAGGAACGGCTGGCCCACAGGTaGGCGACCTGGGACCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: WRCRAGEHVGGTAPGLEERLAHR*ATWDPL Trigger: TAGAGGGTCCCAGGTCGCCCACCTGTGGGCCAGCCG...TTCCTCCAGCCCTGGTGCTGTACCCCCGACGTGCTCCCCTGCTCGGCACCGCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR GCA 90 bp | TGGCGGTGCCGAGCAGGGGAGCACGTCGGGGGTACAGCACCAGGGCTGGAGGAAGCTTCTGGCGGAACTTaGGCTCCAGCGCCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: WRCRAGEHVGGTAPGLEEASGGT*APAPAA Trigger: AGCTGCTGGCGCTGGAGCGCAAGTTCCGCCAGAAGC...TTCCTCCAGCCCTGGTGCTGTACCCCCGACGTGCTCCCCTGCTCGGCACCGCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR GCA 90 bp | TCTGCGCTTTTCTTGCCTGGTGTCAGGACAGGGAAAAGCTATGCAGGAGACATGGAAGGCGGCTGGCGGTaGCGAGCAGGGGAGCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: SALFLPGVRTGKSYAGDMEGGWR*RAGEHV Trigger: GACGTGCTCCCCTGCTCGGCACCGCCAGCCGCCTTC...CATGTCTCCTGCATAGCTTTTCCCTGTCCTGACACCAGGCAAGAAAAGCGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | GCAGGAGACATGGCCTCTAGCTCTGTTCAACTGTCAATTCTGCTGGGGACCTTACTTCTGCCGCAGCACTaGCCAGCCGCCGGGCATGGG | + |
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Preference number: 4 (lower is better) Translates to: AGDMASSSVQLSILLGTLLLPQH*PAAGHG Trigger: CCCATGCCCGGCGGCTGGCCAGTGCTGCGGCAGAAG...TAAGGTCCCCAGCAGAATTGACAGTTGAACAGAGCTAGAGGCCATGTCTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | TATGCAGGAGACATGGCCTCTAGCTCTGTTCAACTGTCAATTCTGCTGGGGACCGGGACACTTTGGGCTTaGCCCCCTCCTCGTCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: YAGDMASSSVQLSILLGTGTLWA*PPPRPR Trigger: GCGCGGACGAGGAGGGGGCCAAGCCCAAAGTGTCCC...GGTCCCCAGCAGAATTGACAGTTGAACAGAGCTAGAGGCCATGTCTCCTGCATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR TCA 90 bp | CTGGTACTGGTAAGAGAGAGGTCCCTTCAACCTACCTTTGCAACACATCTGTGTGCAGCTGCGCGGTGGTaGAGGGCGTCCGCGGCTTAC | + |
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Preference number: 4 (lower is better) Translates to: LVLVRERSLQPTFATHLCAAARW*RASAAY Trigger: GTAAGCCGCGGACGCCCTTCACCACCGCGCAGCTGC...ACACAGATGTGTTGCAAAGGTAGGTTGAAGGGACCTCTCTCTTACCAGTACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | TCCAGCCACTTTTTGGCAGGGATCAGACTTCGGAGAGTGAACTCAGGGAGCAAAGCTGGAGGAATCGGCTaGCCCACAGGTGGGCGACCT | + |
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Preference number: 4 (lower is better) Translates to: SSHFLAGIRLRRVNSGSKAGGIG*PTGGRP Trigger: AGGTCGCCCACCTGTGGGCCAGCCGATTCCTCCAGC...TTTGCTCCCTGAGTTCACTCTCCGAAGTCTGATCCCTGCCAAAAAGTGGCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR TCA 90 bp | TCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCAGGACAGGGAAAAGCCGGGGCTCTCGGCTTTaGCGAGCGCATCTTCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SDTDFSALFLPGVRTGKSRGSRL*RAHLLA Trigger: TGCCAGAAGATGCGCTCGTCAAAGCCGAGAGCCCCG...GCTTTTCCCTGTCCTGACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR GCA 90 bp | TCATTTCCAAAATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCCTGGCCTCCGGTCGCTaGCGCCGCGCAGGCAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: SFPKSSDTDFSALFLPGVLASGR*RRAGRV Trigger: AACTCTGCCTGCGCGGCGGCAGCGACCGGAGGCCAG...GACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGATTTTGGAAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR GCA 90 bp | TCCAGCCACTTTTTGGCAGGGATCAGACTTCGGAGAGTGAACTCAGGGAGCAAAGGTTCGTCTTGTGTTTaGGGAGGGTGCAGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SSHFLAGIRLRRVNSGSKGSSCV*GGCRLG Trigger: CCCCAGCCTGCACCCTCCGCAAACACAAGACGAACC...TTTGCTCCCTGAGTTCACTCTCCGAAGTCTGATCCCTGCCAAAAAGTGGCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR GCA 90 bp | TGTGTTTCTGGTACTGGTAAGAGAGAGGTCCCTTCAACCTACCTTTGCAACACATCCAGCGCCAGCAGCTaGGCGGTGGTGAAGGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: CVSGTGKREVPSTYLCNTSSASS*AVVKGV Trigger: GACGCCCTTCACCACCGCGCAGCTGCTGGCGCTGGA...TGTGTTGCAAAGGTAGGTTGAAGGGACCTCTCTCTTACCAGTACCAGAAACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | ATTTCCAAAATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCAGCCAGGGCGCTCTCCTTaGCCCCCGGCTTCCTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: ISKIVRHRFLCAFLAWCQPGRSP*PPASCG Trigger: ACCACAGGAAGCCGGGGGCCAAGGAGAGCGCCCTGG...CTGACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGATTTTGGAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | AAAATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCAGGACAGGCAGCCGGTGGCAGCATaGGCTTGGCGGCCATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: KIVRHRFLCAFLAWCQDRQPVAA*AWRPSS Trigger: TGAAGATGGCCGCCAAGCCCATGCTGCCACCGGCTG...CCTGTCCTGACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR GCA 90 bp | TGTGTTTCTGGTACTGGTAAGAGAGAGGTCCCTTCAACCTACCTTTGCAACACAGAGAAGCGGGGGCTCTaGATCCACGGGGTCCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: CVSGTGKREVPSTYLCNTEKRGL*IHGVLS Trigger: CGAGAGGACCCCGTGGATGCAGAGCCCCCGCTTCTC...TGTGTTGCAAAGGTAGGTTGAAGGGACCTCTCTCTTACCAGTACCAGAAACACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | AAAATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCAGGACAGGGACGAGCGCATCTTCTaGCAGCTTGAGGAGTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: KIVRHRFLCAFLAWCQDRDERIF*QLEESP Trigger: GGGGGACTCCTCAAGCTGCCAGAAGATGCGCTCGTC...CCTGTCCTGACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGATTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | ATTTCCAAAATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCAGCCGCGCGCTCGGCGATaGACAGGTACTGCTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ISKIVRHRFLCAFLAWCQPRARR*TGTASG Trigger: GCCAGAAGCAGTACCTGTCCATCGCCGAGCGCGCGG...CTGACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGATTTTGGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR TCA 90 bp | TATGCAGGAGACATGGCCTCTAGCTCTGTTCAACTGTCAATTCTGCTGGGGACCGAAACTGGAGCAGTGTaGGGGTTAAAGGGAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: YAGDMASSSVQLSILLGTETGAV*GLKGRR Trigger: CCGCCTTCCCTTTAACCCTCACACTGCTCCAGTTTC...GGTCCCCAGCAGAATTGACAGTTGAACAGAGCTAGAGGCCATGTCTCCTGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | TTAAATTTTCCAATGGAAGAAGCTAGGATTCATCTTCCTGGCTGGCTAGTCTTTCCAGCTCCGGCGTGCTaGGCCTGGCCTCCGGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: LNFPMEEARIHLPGWLVFPAPAC*AWPPVA Trigger: AGCGACCGGAGGCCAGGCCCAGCACGCCGGAGCTGG...AAAGACTAGCCAGCCAGGAAGATGAATCCTAGCTTCTTCCATTGGAAAATTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | AAAATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCAGGACAGGGTGGCAGCATGGGCTTaGCGGCCATCTTCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KIVRHRFLCAFLAWCQDRVAAWA*RPSSAS Trigger: AGAAGCTGAAGATGGCCGCCAAGCCCATGCTGCCAC...CCTGTCCTGACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | ATTTCCAAAATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCAGGTACAGCACCAGGGCTaGAGGAATCGGCTGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: ISKIVRHRFLCAFLAWCQVQHQG*RNRLAH Trigger: GTGGGCCAGCCGATTCCTCCAGCCCTGGTGCTGTAC...CTGACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGATTTTGGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR TCA 90 bp | AAAATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCAGGACAGGCGGAGTCCTCCACTTTaGCACCGAGTGGCAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: KIVRHRFLCAFLAWCQDRRSPPL*HRVAKK Trigger: CTTCTTTGCCACTCGGTGTCAAAGTGGAGGACTCCG...CCTGTCCTGACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR GCA 90 bp | CCAAAATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCAGGACAATGTCAGGTGGTACATaGTGTAGCCCACATGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PKSSDTDFSALFLPGVRTMSGGT*CSPHGP Trigger: CGGCCCATGTGGGCTACAGCATGTACCACCTGACAT...TGTCCTGACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGATTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR GCA 90 bp | GCAGGAGACATGGCCTCTAGCTCTGTTCAACTGTCAATTCTGCTGGGGACCTTATCTCTGCGCTTTTCTTaGCTGGTGTCAGGACAGGGA | + |
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Preference number: 4 (lower is better) Translates to: AGDMASSSVQLSILLGTLSLRFS*LVSGQG Trigger: TCCCTGTCCTGACACCAGGCAAGAAAAGCGCAGAGA...TAAGGTCCCCAGCAGAATTGACAGTTGAACAGAGCTAGAGGCCATGTCTCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | TTAAATTTTCCAATGGAAGAAGCTAGGATTCATCTTCCTGGCTGGCTAGTCTTTGCCCCCGGCTTCCTGTaGTCGGCCATGAGCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LNFPMEEARIHLPGWLVFAPGFL*SAMSAS Trigger: GGAGGCGCTCATGGCCGACCACAGGAAGCCGGGGGC...AAAGACTAGCCAGCCAGGAAGATGAATCCTAGCTTCTTCCATTGGAAAATTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | GTCTTAAATTTTCCAATGGAAGAAGCTAGGATTCATCTTCCTGGCTGGCTAGTCGCGAAGGGGACACTTTaGGCTTGGCCCCCTCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: VLNFPMEEARIHLPGWLVAKGTL*AWPPPR Trigger: ACGAGGAGGGGGCCAAGCCCAAAGTGTCCCCTTCGC...GACTAGCCAGCCAGGAAGATGAATCCTAGCTTCTTCCATTGGAAAATTTAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | ATTGTGTTTCTGGTACTGGTAAGAGAGAGGTCCCTTCAACCTACCTTTGCAACACACAGGTGGGCGACCTaGGACCCTCTATGTCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: IVFLVLVRERSLQPTFATHRWAT*DPLCQV Trigger: CACCTGACATAGAGGGTCCCAGGTCGCCCACCTGTG...TGTTGCAAAGGTAGGTTGAAGGGACCTCTCTCTTACCAGTACCAGAAACACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | TCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCAGGACAGGGAAAAGCCTTCCAGCCACTTTTTaGCAGGGATCAGACTTCGGA | + |
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Preference number: 4 (lower is better) Translates to: SDTDFSALFLPGVRTGKSLPATF*QGSDFG Trigger: TCCGAAGTCTGATCCCTGCCAAAAAGTGGCTGGAAG...GCTTTTCCCTGTCCTGACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| 3UTR CAA 72 bp | GCTAGAAGAGTACTAAGGGACTCTTCCAGCCACTTTTaGGCAGGGATCAGACTTCGGAGAGTGAACTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ARRVLRDSSSHF*AGIRLRRVNSG Trigger: CCCTGAGTTCACTCTCCGAAGTCTGATCCCTGCCAAAAAGTGGCTGGAAGAGTCCCTTAGTACTCTTCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR TCA 90 bp | TCATTTCCAAAATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCCAGGGAGCAAAGAGGTaGAACTGGAGCAGTGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SFPKSSDTDFSALFLPGVQGAKR*NWSSVR Trigger: CCTCACACTGCTCCAGTTTCACCTCTTTGCTCCCTG...GACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGATTTTGGAAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR TCA 90 bp | GTGTTTCTGGTACTGGTAAGAGAGAGGTCCCTTCAACCTACCTTTGCAACACATTCAGACTTCGGAGAGTaGACTCAGGGAGCAAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: VFLVLVRERSLQPTFATHSDFGE*TQGAKR Trigger: CCTCTTTGCTCCCTGAGTTCACTCTCCGAAGTCTGA...ATGTGTTGCAAAGGTAGGTTGAAGGGACCTCTCTCTTACCAGTACCAGAAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR GCA 90 bp | AAAATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCAGGACAGGAGACACCGATTTCTCTaGGCTTTTCTTGCCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: KIVRHRFLCAFLAWCQDRRHRFL*AFLAWC Trigger: ACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCT...CCTGTCCTGACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR GCA 90 bp | TCATTTCCAAAATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCCATCTGTGTTTTCCCTaGCCCCCAGAGCAAATGTTT | + |
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Preference number: 4 (lower is better) Translates to: SFPKSSDTDFSALFLPGVHLCFP*PPEQMF Trigger: AAACATTTGCTCTGGGGGGCAGGGAAAACACAGATG...GACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGATTTTGGAAATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR TCA 90 bp | CTGGTACTGGTAAGAGAGAGGTCCCTTCAACCTACCTTTGCAACACATCTGTGTTTCCAAAGGGATGTTTaGGAGCCACACAAATGTACT | + |
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Preference number: 4 (lower is better) Translates to: LVLVRERSLQPTFATHLCFQRDV*EPHKCT Trigger: AGTACATTTGTGTGGCTCTCAAACATCCCTTTGGAA...ACACAGATGTGTTGCAAAGGTAGGTTGAAGGGACCTCTCTCTTACCAGTACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CCA 90 bp | ATTGTGTTTCTGGTACTGGTAAGAGAGAGGTCCCTTCAACCTACCTTTGCAACACACTTTGACACCGAGTaGCAAAGAAGTCATGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: IVFLVLVRERSLQPTFATHFDTE*QRSHVS Trigger: GCTGACATGACTTCTTTGCCACTCGGTGTCAAAGTG...TGTTGCAAAGGTAGGTTGAAGGGACCTCTCTCTTACCAGTACCAGAAACACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS GCA 90 bp | GCCAGAGGCACCGTAGAGCGAGGCACCCGCCGCGGCCGCTACAGCTaGGGGGCCGCCGAGAGGGAAGGAGAGGCCGAAGGCAGCCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: ARGTVERGTRRGRYS*GAAEREGEAEGSRW Trigger: CCACCGGCTGCCTTCGGCCTCTCCTTCCCTCTCGGCGGCCCCGCAGCTGTAGCGGCCGCGGCGGGTGCCTCGCTCTACGGTGCCTCTGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS CCA 90 bp | GGCGGTGCCGAGCAGGGGAGCACGTCGGGGGTACAGCACCAGGGCTaGAGGAATCGGCTGGCCCACAGGTGGGCGACCTGGGACCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: GGAEQGSTSGVQHQG*RNRLAHRWATWDPL Trigger: TAGAGGGTCCCAGGTCGCCCACCTGTGGGCCAGCCGATTCCTCCAGCCCTGGTGCTGTACCCCCGACGTGCTCCCCTGCTCGGCACCGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS CCA 90 bp | AGGGGAGCACGTCGGGGGTACAGCACCAGGGCTGGAGGAATCGGCTaGCCCACAGGTGGGCGACCTGGGACCCTCTATGTCAGGTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: RGARRGYSTRAGGIG*PTGGRPGTLYVRWY Trigger: GTACCACCTGACATAGAGGGTCCCAGGTCGCCCACCTGTGGGCCAGCCGATTCCTCCAGCCCTGGTGCTGTACCCCCGACGTGCTCCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS CCA 90 bp | CAGCACCAGGGCTGGAGGAATCGGCTGGCCCACAGGTGGGCGACCTaGGACCCTCTATGTCAGGTGGTACATGCTGTAGCCCACATGGGC | + |
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Preference number: 5 (lower is better) Translates to: QHQGWRNRLAHRWAT*DPLCQVVHAVAHMG Trigger: GCCCATGTGGGCTACAGCATGTACCACCTGACATAGAGGGTCCCAGGTCGCCCACCTGTGGGCCAGCCGATTCCTCCAGCCCTGGTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS CCA 90 bp | TCGGGGGTACAGCACCAGGGCTGGAGGAATCGGCTGGCCCACAGGTaGGCGACCTGGGACCCTCTATGTCAGGTGGTACATGCTGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: SGVQHQGWRNRLAHR*ATWDPLCQVVHAVA Trigger: GGCTACAGCATGTACCACCTGACATAGAGGGTCCCAGGTCGCCCACCTGTGGGCCAGCCGATTCCTCCAGCCCTGGTGCTGTACCCCCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CAA 90 bp | GCAGGAGACATGGCCTCTAGCTCTGTTCAACTGTCAATTCTGCTGGGGACCTTAGGGGACACTTTGGGCTaGGCCCCCTCCTCGTCCGCG | + |
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Preference number: 5 (lower is better) Translates to: AGDMASSSVQLSILLGTLGDTLG*APSSSA Trigger: CGCGGACGAGGAGGGGGCCAAGCCCAAAGTGTCCCC...TAAGGTCCCCAGCAGAATTGACAGTTGAACAGAGCTAGAGGCCATGTCTCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CAA 90 bp | TCCAGCCACTTTTTGGCAGGGATCAGACTTCGGAGAGTGAACTCAGGGAGCAAATGCTTCTGGCGGAACTaGCGCTCCAGCGCCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SSHFLAGIRLRRVNSGSKCFWRN*RSSASS Trigger: GCTGCTGGCGCTGGAGCGCAAGTTCCGCCAGAAGCA...TTTGCTCCCTGAGTTCACTCTCCGAAGTCTGATCCCTGCCAAAAAGTGGCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CAA 90 bp | TCCAGCCACTTTTTGGCAGGGATCAGACTTCGGAGAGTGAACTCAGGGAGCAAATCGGGGCTCTCGGCTTaGACGAGCGCATCTTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: SSHFLAGIRLRRVNSGSKSGLSA*TSASSG Trigger: GCCAGAAGATGCGCTCGTCAAAGCCGAGAGCCCCGA...TTTGCTCCCTGAGTTCACTCTCCGAAGTCTGATCCCTGCCAAAAAGTGGCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CAA 90 bp | ATTTCCAAAATCGTCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCAGAGCGAAGGGGACACTTaGGGCTTGGCCCCCTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: ISKIVRHRFLCAFLAWCQSEGDT*GLAPSS Trigger: CGAGGAGGGGGCCAAGCCCAAAGTGTCCCCTTCGCT...CTGACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGACGATTTTGGAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CAA 90 bp | TCAGACACCGATTTCTCTGCGCTTTTCTTGCCTGGTGTCAGGACAGGGAAAAGCGCGGAGTCCTCCACTTaGACACCGAGTGGCAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: SDTDFSALFLPGVRTGKSAESST*TPSGKE Trigger: TTCTTTGCCACTCGGTGTCAAAGTGGAGGACTCCGC...GCTTTTCCCTGTCCTGACACCAGGCAAGAAAAGCGCAGAGAAATCGGTGTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CAA 90 bp | AATTGTGTTTCTGGTACTGGTAAGAGAGAGGTCCCTTCAACCTACCTTTGCAACCGGTTCGTCTTGTGTTaGCGGAGGGTGCAGGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: NCVSGTGKREVPSTYLCNRFVLC*RRVQAG Trigger: CCCAGCCTGCACCCTCCGCAAACACAAGACGAACCG...GTTGCAAAGGTAGGTTGAAGGGACCTCTCTCTTACCAGTACCAGAAACACAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CAA 90 bp | CTGGTACTGGTAAGAGAGAGGTCCCTTCAACCTACCTTTGCAACACATCTGTGTGGCTTACGGTTCGTCTaGTGTTTGCGGAGGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: LVLVRERSLQPTFATHLCGLRFV*CLRRVQ Trigger: CTGCACCCTCCGCAAACACAAGACGAACCGTAAGCC...ACACAGATGTGTTGCAAAGGTAGGTTGAAGGGACCTCTCTCTTACCAGTACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CAA 90 bp | GCAGGAGACATGGCCTCTAGCTCTGTTCAACTGTCAATTCTGCTGGGGACCTTATCTTCCAGCCACTTTTaGGCAGGGATCAGACTTCGG | + |
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Preference number: 5 (lower is better) Translates to: AGDMASSSVQLSILLGTLSSSHF*AGIRLR Trigger: CCGAAGTCTGATCCCTGCCAAAAAGTGGCTGGAAGA...TAAGGTCCCCAGCAGAATTGACAGTTGAACAGAGCTAGAGGCCATGTCTCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CAA 90 bp | GTCTTAAATTTTCCAATGGAAGAAGCTAGGATTCATCTTCCTGGCTGGCTAGTCGGTGGCAGCATGGGCTaGGCGGCCATCTTCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: VLNFPMEEARIHLPGWLVGGSMG*AAIFSF Trigger: GAAGCTGAAGATGGCCGCCAAGCCCATGCTGCCACC...GACTAGCCAGCCAGGAAGATGAATCCTAGCTTCTTCCATTGGAAAATTTAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CAA 90 bp | ATTGTGTTTCTGGTACTGGTAAGAGAGAGGTCCCTTCAACCTACCTTTGCAACACCTCTTGTAGTCTCTTaGCCTTGGCGCGGCGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: IVFLVLVRERSLQPTFATPLVVS*PWRGGS Trigger: AGAACCGCCGCGCCAAGGCAAAGAGACTACAAGAGG...TGTTGCAAAGGTAGGTTGAAGGGACCTCTCTCTTACCAGTACCAGAAACACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CAA 90 bp | TATGCAGGAGACATGGCCTCTAGCTCTGTTCAACTGTCAATTCTGCTGGGGACCCTTCCAAAGGGATGTTaGAGAGCCACACAAATGTAC | + |
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Preference number: 5 (lower is better) Translates to: YAGDMASSSVQLSILLGTLPKGC*RATQMY Trigger: GTACATTTGTGTGGCTCTCAAACATCCCTTTGGAAG...GGTCCCCAGCAGAATTGACAGTTGAACAGAGCTAGAGGCCATGTCTCCTGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CAA 90 bp | TTAAATTTTCCAATGGAAGAAGCTAGGATTCATCTTCCTGGCTGGCTAGTCTTTTTCTCTGCGCTTTTCTaGCCTGGTGTCAGGACAGGG | + |
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Preference number: 5 (lower is better) Translates to: LNFPMEEARIHLPGWLVFFSALF*PGVRTG Trigger: CCCTGTCCTGACACCAGGCAAGAAAAGCGCAGAGAA...AAAGACTAGCCAGCCAGGAAGATGAATCCTAGCTTCTTCCATTGGAAAATTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS-3UTR CAA 90 bp | GTCTTAAATTTTCCAATGGAAGAAGCTAGGATTCATCTTCCTGGCTGGCTAGTCCCCTTCAACCTACCTTaGCAACACATCTGTGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: VLNFPMEEARIHLPGWLVPFNLP*QHICVF Trigger: GAAAACACAGATGTGTTGCAAAGGTAGGTTGAAGGG...GACTAGCCAGCCAGGAAGATGAATCCTAGCTTCTTCCATTGGAAAATTTAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS GCA 72 bp | ACCGTAGAGCGAGGCACCCGCCGCGGCCGCTACAGCTaGGGGGCCGCCGAGAGGGAAGGAGAGGCCGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: TVERGTRRGRYS*GAAEREGEAEG Trigger: GCCTTCGGCCTCTCCTTCCCTCTCGGCGGCCCCGCAGCTGTAGCGGCCGCGGCGGGTGCCTCGCTCTACGGT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS CCA 72 bp | CGTCGGGGGTACAGCACCAGGGCTGGAGGAATCGGCTaGCCCACAGGTGGGCGACCTGGGACCCTCTATGTC | + |
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Preference number: 6 (lower is better) Translates to: RRGYSTRAGGIG*PTGGRPGTLYV Trigger: GACATAGAGGGTCCCAGGTCGCCCACCTGTGGGCCAGCCGATTCCTCCAGCCCTGGTGCTGTACCCCCGACG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS GCA 72 bp | GGGGGCTCAGCCGCCCAGATATTGAGTGCCGCCAAGTaGCTCGGTGCCGGGCATCGCGCAAGGCACTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: GGSAAQILSAAK*LGAGHRARHLK Trigger: TTTCAAGTGCCTTGCGCGATGCCCGGCACCGAGGCACTTGGCGGCACTCAATATCTGGGCGGCTGAGCCCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468421.1 |
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| CDS TCA 72 bp | CCCCCGCCGGCTTGCCGAAGGCGGAGTCCTCCACTTTaGCACCGAGTGGCAAAGAAGTCATGTCAGCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: PPPACRRRSPPL*HRVAKKSCQQP Trigger: CGGCTGCTGACATGACTTCTTTGCCACTCGGTGTCAAAGTGGAGGACTCCGCCTTCGGCAAGCCGGCGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS CCA 72 bp | AGGAGAGGCCGAAGGCAGCCGGTGGCAGCATGGGCTTaGCGGCCATCTTCAGCTTCTCCAGCTCTGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RRGRRQPVAAWA*RPSSASPALPL Trigger: AAGAGGCAGAGCTGGAGAAGCTGAAGATGGCCGCCAAGCCCATGCTGCCACCGGCTGCCTTCGGCCTCTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382723.5 ENST00000468421.1 |
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| CDS CCA 72 bp | GGCTGGAGGAATCGGCTGGCCCACAGGTGGGCGACCTaGGACCCTCTATGTCAGGTGGTACATGCTGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: GWRNRLAHRWAT*DPLCQVVHAVA Trigger: GGCTACAGCATGTACCACCTGACATAGAGGGTCCCAGGTCGCCCACCTGTGGGCCAGCCGATTCCTCCAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS CAA 72 bp | AAGGAGAGGCCGAAGGCAGCCGGTGGCAGCATGGGCTaGGCGGCCATCTTCAGCTTCTCCAGCTCTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: KERPKAAGGSMG*AAIFSFSSSAS Trigger: AGAGGCAGAGCTGGAGAAGCTGAAGATGGCCGCCAAGCCCATGCTGCCACCGGCTGCCTTCGGCCTCTCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382723.5 ENST00000468421.1 |
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| CDS GCA 72 bp | GTGGGCGACCTGGGACCCTCTATGTCAGGTGGTACATaGTGTAGCCCACATGGGCCGTGTAGAGTCCCACGG | + |
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Preference number: 6 (lower is better) Translates to: VGDLGPSMSGGT*CSPHGPCRVPR Trigger: CCGTGGGACTCTACACGGCCCATGTGGGCTACAGCATGTACCACCTGACATAGAGGGTCCCAGGTCGCCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382723.5 |
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| CDS TCA 72 bp | CCAAGTGCCTCGGTGCCGGGCATCGCGCAAGGCACTTaGAATATATTTTCTCCAATTCCCATTGCAACCCCG | + |
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Preference number: 6 (lower is better) Translates to: PSASVPGIAQGT*NIFSPIPIATP Trigger: CGGGGTTGCAATGGGAATTGGAGAAAATATATTTCAAGTGCCTTGCGCGATGCCCGGCACCGAGGCACTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468421.1 |
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