Pregenerated sensors for MST1 (Homo sapiens)
Ensembl gene IDs: ENSG00000173531Ensembl transcript IDs: ENST00000448220.5, ENST00000449682.2
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ATAAAGAGGAAACATGGCTTTATGTCTGACAAGAAGTTTTGTCCTCCCCAAGGCCCCCCGCAGAAATGCTaGCCCTGCCGATTCCGCAAG | + |
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Preference number: 4 (lower is better) Translates to: IKRKHGFMSDKKFCPPQGPPQKC*PCRFRK Trigger: CTTGCGGAATCGGCAGGGCCAGCATTTCTGCGGGGG...GCCTTGGGGAGGACAAAACTTCTTGTCAGACATAAAGCCATGTTTCCTCTTTAT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000449682.2 |
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| CDS-3UTR GCA 90 bp | ATAAAGAGGAAACATGGCTTTATGTCTGACAAGAAGTTTTGTCCTCCCCAAGGCTGTGAAAGTGAGAGCTaGCAGAGGTCTGGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IKRKHGFMSDKKFCPPQGCESES*QRSGLQ Trigger: CTGGAGCCCAGACCTCTGGCAGCTCTCACTTTCACA...GCCTTGGGGAGGACAAAACTTCTTGTCAGACATAAAGCCATGTTTCCTCTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449682.2 |
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| CDS-3UTR CCA 90 bp | AAGAGGAAACATGGCTTTATGTCTGACAAGAAGTTTTGTCCTCCCCAAGGCATATGGCTCTCCATGCTGTaGGTTCAGGAGGAGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KRKHGFMSDKKFCPPQGIWLSML*VQEEKH Trigger: GTGCTTCTCCTCCTGAACCCACAGCATGGAGAGCCA...TATGCCTTGGGGAGGACAAAACTTCTTGTCAGACATAAAGCCATGTTTCCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448220.5 |
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| CDS-3UTR TCA 90 bp | ATAAAGAGGAAACATGGCTTTATGTCTGACAAGAAGTTTTGTCCTCCCCAAGGCGTGGGCGTGTACTTGTaGTCATTTGGGAACTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: IKRKHGFMSDKKFCPPQGVGVYL*SFGNLW Trigger: CCACAAGTTCCCAAATGATCACAAGTACACGCCCAC...GCCTTGGGGAGGACAAAACTTCTTGTCAGACATAAAGCCATGTTTCCTCTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449682.2 |
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| CDS-3UTR CAA 90 bp | ATAAAGAGGAAACATGGCTTTATGTCTGACAAGAAGTTTTGTCCTCCCCAAGGCTTCTCCCGAAGGTCTTaGCACGCGTATTTTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IKRKHGFMSDKKFCPPQGFSRRS*HAYFSG Trigger: GCCAGAAAAATACGCGTGCAAAGACCTTCGGGAGAA...GCCTTGGGGAGGACAAAACTTCTTGTCAGACATAAAGCCATGTTTCCTCTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000449682.2 |
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