RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MS4A14 (Homo sapiens)

Ensembl gene IDs: ENSG00000166928

Ensembl transcript IDs: ENST00000300187.11, ENST00000395001.5, ENST00000395005.6, ENST00000525397.5, ENST00000526375.5, ENST00000527841.5, ENST00000530662.5, ENST00000531783.5, ENST00000531787.5, ENST00000531949.1, ENST00000534688.2

Found 1286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTTTCGGGGATTTCTTCTCTTGGGCCGGCTGGTCTTCAGTTTGCTaGTCCTGGGTTTGCTTCTTTGAGTTTTGCTCCTTATCAGTCTGC +
Preference number: 1 (lower is better)
Translates to: PFGDFFSWAGWSSVC*SWVCFFEFCSLSVC
Trigger: GCAGACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAGGATCAGCAAACTGAAGACCAGCCGGCCCAAGAGAAGAAATCCCCGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR TCA 90 bp GAGCTTGCTTATCTACGGAGTGCCTCTTTGGGGATAGCCAGTCTTTaGTTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTT +
Preference number: 1 (lower is better)
Translates to: ELAYLRSASLGIASL*FAGLRISALEIASL
Trigger: AAGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCTATCCCCAAAGAGGCACTCCGTAGATAAGCAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR TCA 90 bp TTGGGCCGGCTGGTCTTCAGTTTGCTGATCCTGGGTTTGCTTCTTTaGGTTTTGCTCCTTATCAGTCTGCTGGTCTTTAACTTGTCCATC +
Preference number: 1 (lower is better)
Translates to: LGRLVFSLLILGLLL*VLLLISLLVFNLSI
Trigger: GATGGACAAGTTAAAGACCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAGGATCAGCAAACTGAAGACCAGCCGGCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR GCA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTaGTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGC +
Preference number: 1 (lower is better)
Translates to: WAVACWVWTSWYRAF*FRASFSNRSCVCQC
Trigger: GCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR GCA 90 bp GGGAACTGCACAATATGGGATGTTGAGGCTTCAGGTAATATGGCATaGGCTGATAGAGCTTGGGATAGCATATCTTGGGAAGGTATGTCT +
Preference number: 1 (lower is better)
Translates to: GNCTIWDVEASGNMA*ADRAWDSISWEGMS
Trigger: AGACATACCTTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACCTGAAGCCTCAACATCCCATATTGTGCAGTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CCA 90 bp GATGGCAAGTCTTCAGGTGATATATCTTCGAGTTTTAGTGCAGAATaGGATGGAAAAACTTGGAGTGACGCAGCTTGGTCCTGCAGAAGC +
Preference number: 1 (lower is better)
Translates to: DGKSSGDISSSFSAE*DGKTWSDAAWSCRS
Trigger: GCTTCTGCAGGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCATTCTGCACTAAAACTCGAAGATATATCACCTGAAGACTTGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CCA 90 bp TTATCTACGGAGTGCCTCTTTGGGGATAGCCAGTCTTTGATTTGCTaGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTTTGCTTTGC +
Preference number: 1 (lower is better)
Translates to: LSTECLFGDSQSLIC*SKDFCFGDCQPLLC
Trigger: GCAAAGCAAAGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCTATCCCCAAAGAGGCACTCCGTAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CCA 90 bp TTTCAGGGAACTGCACAATATGGGATGTTGAGGCTTCAGGTAATATaGCATGCGCTGATAGAGCTTGGGATAGCATATCTTGGGAAGGTA +
Preference number: 1 (lower is better)
Translates to: FQGTAQYGMLRLQVI*HALIELGIAYLGKV
Trigger: TACCTTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACCTGAAGCCTCAACATCCCATATTGTGCAGTTCCCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CCA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTaGTATAGAGCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCC +
Preference number: 1 (lower is better)
Translates to: HSRLCWAVACWVWTS*YRAFCFRASFSNRS
Trigger: GGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR CCA 90 bp TTAGATGGCATGGTTTGTTCTGACAGGCCTTCTACTGGTAGAGCTTaGGATGGCAAGTCTTCAGGTGATATATCTTCGAGTTTTAGTGCA +
Preference number: 1 (lower is better)
Translates to: LDGMVCSDRPSTGRA*DGKSSGDISSSFSA
Trigger: TGCACTAAAACTCGAAGATATATCACCTGAAGACTTGCCATCCCAAGCTCTACCAGTAGAAGGCCTGTCAGAACAAACCATGCCATCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CCA 90 bp ATCAGTCTGCTGGTCTTTAACTTGTCCATCTTTAGATTGTCCTTCTaGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATC +
Preference number: 1 (lower is better)
Translates to: ISLLVFNLSIFRLSF*VLFPFGLLIFSLLI
Trigger: GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAATCTAAAGATGGACAAGTTAAAGACCAGCAGACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR GCA 90 bp TGTCCAGCCTGGAGATTGCCTTTGTGGAATTGCCAGAATTGGTATTaGTGTATTTGGGATTCTGAATCTTGGCATAACAGTTTTGGCACT +
Preference number: 1 (lower is better)
Translates to: CPAWRLPLWNCQNWY*CIWDSESWHNSFGT
Trigger: AGTGCCAAAACTGTTATGCCAAGATTCAGAATCCCAAATACAGCAATACCAATTCTGGCAATTCCACAAAGGCAATCTCCAGGCTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CCA 90 bp AGGAAGCTGAAGTGTCTGGTTGCACATCTTGTTCTGAATCTAGATTaGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAG +
Preference number: 1 (lower is better)
Translates to: RKLKCLVAHLVLNLD*TNRLNMCLVLSFGQ
Trigger: CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACACTTCAGCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR CCA 90 bp TGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTaGGAGTTGCTCTTTAGTTTGATTAAGTTGAGCTTGCTTATCTAC +
Preference number: 1 (lower is better)
Translates to: WVLFPFGLLIFSLLI*ELLFSLIKLSLLIY
Trigger: GTAGATAAGCAAGCTCAACTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR TCA 90 bp ACTTGGAGTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCATTTaGGAAGGTTGTACAATAGCAGATTGTAGATCTTCATCTTTCATT +
Preference number: 1 (lower is better)
Translates to: TWSDAAWSCRSLVCI*EGCTIADCRSSSFI
Trigger: AATGAAAGATGAAGATCTACAATCTGCTATTGTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR TCA 90 bp AAGAATAAACTGAGAGTAGTTATTACAATGATGATGGTAGTGCAGTaGCCAAATGGAGTTGCTTCTTTTGCCGTGAAGGGAGCTGCCTTT +
Preference number: 1 (lower is better)
Translates to: KNKLRVVITMMMVVQ*PNGVASFAVKGAAF
Trigger: AAAGGCAGCTCCCTTCACGGCAAAAGAAGCAACTCCATTTGGTCACTGCACTACCATCATCATTGTAATAACTACTCTCAGTTTATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531949.1
3UTR GCA 90 bp CAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTAGATTCTaGATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATC +
Preference number: 1 (lower is better)
Translates to: QFNSINGGSVVLGRF*MLVRVFRLLLIFWI
Trigger: GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAATACCACACTGCCCCCATTAATGGAATTAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR CCA 90 bp TGCTTTTGTTCATCTGGCACAAATTCTCTACCTTTATTACCTGGTTaGGAGACTAAAGGACTCCTAGAGAGTGTTAACTTGAAGAAAGCA +
Preference number: 1 (lower is better)
Translates to: CFCSSGTNSLPLLPG*ETKGLLESVNLKKA
Trigger: TGCTTTCTTCAAGTTAACACTCTCTAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGGTAGAGAATTTGTGCCAGATGAACAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR TCA 90 bp GATTGTAGATCTTCATCTTTCATTTGTTTAAATGTAGAGTCTAGCTaGATGGACATATTTTCTGAGGGCTTTTTCTCTAGTGTGGGAGGC +
Preference number: 1 (lower is better)
Translates to: DCRSSSFICLNVESS*MDIFSEGFFSSVGG
Trigger: GCCTCCCACACTAGAGAAAAAGCCCTCAGAAAATATGTCCATTCAGCTAGACTCTACATTTAAACAAATGAAAGATGAAGATCTACAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp GGGAAGGTATGTCTTGAGGTGGCATGGCGTGGGATGGTGTGTCTTGAGATAGCATGTCTTGAGGTGGCATaGCGTGGGATGGTGTGTCTT +
Preference number: 2 (lower is better)
Translates to: GKVCLEVAWRGMVCLEIACLEVA*RGMVCL
Trigger: AAGACACACCATCCCACGCCATGCCACCTCAAGACA...TGCTATCTCAAGACACACCATCCCACGCCATGCCACCTCAAGACATACCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 90 bp TGGCACTTTCTCCACCTGAGCTTGCTGTCCTTCGGCTTGAACATTTaGGAATTGTCCTTTCGGGGATTTCTTCTCTTGGGCCGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: WHFLHLSLLSFGLNI*ELSFRGFLLLGRLV
Trigger: GACCAGCCGGCCCAAGAGAAGAAATCCCCGAAAGGACAATTCCAAAATGTTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCGGCACTTTCTCCACCTaGGCTTGCTGTCCTTCGGCT +
Preference number: 2 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSGTFST*ACCPSA
Trigger: AGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCC...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGTGTTGGGCTGTTGCGTaGTGGGTTTGGACTTCTTGG +
Preference number: 2 (lower is better)
Translates to: RLLIAGPLRFALYISCPLCWAVA*WVWTSW
Trigger: CCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACA...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR CAA 90 bp TCTCCAGCCCTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATaGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: SPALSYPVRGFLAKR*TVLGCPAWRLPLWN
Trigger: ATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAGGGCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTATGTTGGGCTGTTaGGTGCTGGGTTTGGACTTC +
Preference number: 2 (lower is better)
Translates to: RLLIAGPLRFALYISCPLVMLGC*VLGLDF
Trigger: GAAGTCCAAACCCAGCACGCAACAGCCCAACATAAC...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp GGGAAGGTATGTCTTGAGGTGGCATGGCGTGGGATGGTGTGTCTTGAGATAGCATCTACTGGTAGAGCTTaGGATGGCAAGTCTTCAGGT +
Preference number: 2 (lower is better)
Translates to: GKVCLEVAWRGMVCLEIASTGRA*DGKSSG
Trigger: ACCTGAAGACTTGCCATCCCAAGCTCTACCAGTAGA...TGCTATCTCAAGACACACCATCCCACGCCATGCCACCTCAAGACATACCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 90 bp TTTCTCCACCTGAGCTTGCTGTCCTTCGGCTTGAACATTTTGGAATaGTCCTTTCGGGGATTTCTTCTCTTGGGCCGGCTGGTCTTCAGT +
Preference number: 2 (lower is better)
Translates to: FLHLSLLSFGLNILE*SFRGFLLLGRLVFS
Trigger: ACTGAAGACCAGCCGGCCCAAGAGAAGAAATCCCCGAAAGGACAATTCCAAAATGTTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTAAGAAGCTGATCCTCTaGTCATCTTGGGGCCGTGGA +
Preference number: 2 (lower is better)
Translates to: LLRAGFGLLGIELSALGLKKLIL*SSWGRG
Trigger: TCCACGGCCCCAAGATGATCAGAGGATCAGCTTCTT...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTGTTGGGCTGTTGCGTaGTGGGTTTGGACTTCTTGG +
Preference number: 2 (lower is better)
Translates to: SRLCWAVACWVWTSWYRACWAVA*WVWTSW
Trigger: CCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACA...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCTGTTGGGCTGTTGCGTaGTGGGTTTGGACTTCTTGG +
Preference number: 2 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSCWAVA*WVWTSW
Trigger: CCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACA...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp TCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGGTGTCTTGGGATAGTATaGCTTGAGGGGGCAGGTCAT +
Preference number: 2 (lower is better)
Translates to: SFWVLFPFGLLIFSLLIWCLGIV*LEGAGH
Trigger: ATGACCTGCCCCCTCAAGGCATACTATCCCAAGACA...CCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTAGGTATGTCTTGAGGTaGCATGGCGTGGGATGGTGT +
Preference number: 2 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCRYVLR*HGVGWC
Trigger: ACACCATCCCACGCCATGCCACCTCAAGACATACCT...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp GGCATAACAGTTTTGGCACTTTCTCCACCTGAGCTTGCTGTCCTTCGGCTTGAAAGATCTGGGGGCTGCTaGAGTAGGTGTTGTATTTCA +
Preference number: 2 (lower is better)
Translates to: GITVLALSPPELAVLRLERSGGC*SRCCIS
Trigger: TGAAATACAACACCTACTTCAGCAGCCCCCAGATCT...TTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCCAAAACTGTTATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp CAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGGGATAGCCAGTCTTTaGTTTGCTGGTCTAAGGATT +
Preference number: 2 (lower is better)
Translates to: QGILGQKIDSPGLSSLEIGIASL*FAGLRI
Trigger: AATCCTTAGACCAGCAAATCAAAGACTGGCTATCCC...AATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp GTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCATTTGAGAAGGTTGTACAAGTTATGTTGGGCTGTTaGGTGCTGGGTTTGGACTTC +
Preference number: 2 (lower is better)
Translates to: VTQLGPAEAWFAFEKVVQVMLGC*VLGLDF
Trigger: GAAGTCCAAACCCAGCACGCAACAGCCCAACATAAC...TTGTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp GGCATAACAGTTTTGGCACTTTCTCCACCTGAGCTTGCTGTCCTTCGGCTTGAAAGGTCCCCTGAGGTTTaGCCTATACATTTCATGTCC +
Preference number: 2 (lower is better)
Translates to: GITVLALSPPELAVLRLERSPEV*PIHFMS
Trigger: GGACATGAAATGTATAGGGCAAACCTCAGGGGACCT...TTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCCAAAACTGTTATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp ATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTGACGCAGCTTGGTCCTaGAGAAGCTTGGTTTGCATT +
Preference number: 2 (lower is better)
Translates to: ILGQKIDSPGLSSLEIAFDAAWS*RSLVCI
Trigger: AATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTC...AAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp ATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTTGTCTTGGGATAGTATaGCTTGAGGGGGCAGGTCAT +
Preference number: 2 (lower is better)
Translates to: ILGQKIDSPGLSSLEIAFCLGIV*LEGAGH
Trigger: ATGACCTGCCCCCTCAAGGCATACTATCCCAAGACA...AAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp CAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTGTGGAATTGTGCTTATCTACGGAGTaGCTCTTTGGGGATAGCCAG +
Preference number: 2 (lower is better)
Translates to: QKIDSPGLSSLEIAFVELCLSTE*LFGDSQ
Trigger: CTGGCTATCCCCAAAGAGGCACTCCGTAGATAAGCA...CAATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 90 bp TTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTaGTCCAGCCTGGAGATTGCCTTTGTGGAATTGCCAGAATTGGTA +
Preference number: 2 (lower is better)
Translates to: LSSQGILGQKIDSPG*SSLEIAFVELPELV
Trigger: TACCAATTCTGGCAATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 90 bp ATAATCTTTGTTTCTCCAGCCCTGAGTTATCCAGTCAGGGGATTCTaGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTG +
Preference number: 2 (lower is better)
Translates to: IIFVSPALSYPVRGF*AKRLTVLGCPAWRL
Trigger: CAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAGGGCTGGAGAAACAAAGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp GGCATAACAGTTTTGGCACTTTCTCCACCTGAGCTTGCTGTCCTTCGGCTTGAAACATGTGTCTTGTACTaGGCTTTGGCCAGAAGAAGA +
Preference number: 2 (lower is better)
Translates to: GITVLALSPPELAVLRLETCVLY*ALARRR
Trigger: TCTTCTTCTGGCCAAAGCTCAGTACAAGACACATGT...TTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCCAAAACTGTTATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp GGCTTGCTGATCTTCAGCTTGCTGATCTGGGAGTTGCTCTTTAGTTTGATTAAGAAGAAGCTGATCCTCTaGTCATCTTGGGGCCGTGGA +
Preference number: 2 (lower is better)
Translates to: GLLIFSLLIWELLFSLIKKKLIL*SSWGRG
Trigger: TCCACGGCCCCAAGATGATCAGAGGATCAGCTTCTT...CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTAGGTCCCCTGAGGTTTaGCCTATACATTTCATGTCC +
Preference number: 2 (lower is better)
Translates to: SRLCWAVACWVWTSWYRARSPEV*PIHFMS
Trigger: GGACATGAAATGTATAGGGCAAACCTCAGGGGACCT...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp ATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTAGGTCCCCTGAGGTTTaGCCTATACATTTCATGTCC +
Preference number: 2 (lower is better)
Translates to: ILGQKIDSPGLSSLEIAFRSPEV*PIHFMS
Trigger: GGACATGAAATGTATAGGGCAAACCTCAGGGGACCT...AAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp TCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGGTCAGGTAATATGGCATaGGCTGATAGAGCTTGGGAT +
Preference number: 2 (lower is better)
Translates to: SFWVLFPFGLLIFSLLIWSGNMA*ADRAWD
Trigger: ATCCCAAGCTCTATCAGCGCATGCCATATTACCTGA...CCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTGTTGCGTGCTGGGTTTaGACTTCTTGGTATAGAGCT +
Preference number: 2 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAVACWV*TSWYRA
Trigger: AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAAC...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCCATTCTAGGTTATGTTaGGCTGTTGCGTGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLIHSRLC*AVACWV
Trigger: AACCCAGCACGCAACAGCCCAACATAACCTAGAATG...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp AGCCAGTCTTTGATTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTTGGGATGGAAAAACTTaGAGTGACGCAGCTTGGTCC +
Preference number: 2 (lower is better)
Translates to: SQSLICWSKDFCFGDCQPWDGKT*SDAAWS
Trigger: GGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA...AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 90 bp GGCTTGCTGATCTTCAGCTTGCTGATCTGGGAGTTGCTCTTTAGTTaGATTAAGTTGAGCTTGCTTATCTACGGAGTGCCTCTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: GLLIFSLLIWELLFS*IKLSLLIYGVPLWG
Trigger: TCCCCAAAGAGGCACTCCGTAGATAAGCAAGCTCAACTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 90 bp CTGCTGGTCTTTAACTTGTCCATCTTTAGATTGTCCTTCTGGGTATaGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGGGAG +
Preference number: 2 (lower is better)
Translates to: LLVFNLSIFRLSFWV*FPFGLLIFSLLIWE
Trigger: CTCCCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAATCTAAAGATGGACAAGTTAAAGACCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCACATGTGTCTTGTACTaGGCTTTGGCCAGAAGAAGA +
Preference number: 2 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSTCVLY*ALARRR
Trigger: TCTTCTTCTGGCCAAAGCTCAGTACAAGACACATGT...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR TCA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTACATGTGTCTTGTACTaGGCTTTGGCCAGAAGAAGA +
Preference number: 2 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCTCVLY*ALARRR
Trigger: TCTTCTTCTGGCCAAAGCTCAGTACAAGACACATGT...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTTGGGATGGTGTGTCTTaGGATAGCATATCTAGGGAT +
Preference number: 2 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCWDGVS*DSISRD
Trigger: ATCCCTAGATATGCTATCTCAAGACACACCATCCCA...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCTGGTCTAAGGATTTCTaGTTTGGAGATTGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSWSKDF*FGDCQP
Trigger: AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCA...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp TCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGGAGCCAGTCTTTGATTTaGTGGTCTAAGGATTTCTGC +
Preference number: 2 (lower is better)
Translates to: SFWVLFPFGLLIFSLLIWSQSLI*WSKDFC
Trigger: GCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT...CCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp GGCATAACAGTTTTGGCACTTTCTCCACCTGAGCTTGCTGTCCTTCGGCTTGAACCTTTATTACCTGGTTaGGAGACTAAAGGACTCCTA +
Preference number: 2 (lower is better)
Translates to: GITVLALSPPELAVLRLEPLLPG*ETKGLL
Trigger: TAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGG...TTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCCAAAACTGTTATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp TCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGGCCTTTATTACCTGGTTaGGAGACTAAAGGACTCCTA +
Preference number: 2 (lower is better)
Translates to: SFWVLFPFGLLIFSLLIWPLLPG*ETKGLL
Trigger: TAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGG...CCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTAGGCTTCAGGTAATATaGCATGCGCTGATAGAGCTT +
Preference number: 2 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCRLQVI*HALIEL
Trigger: AAGCTCTATCAGCGCATGCCATATTACCTGAAGCCT...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp GCTGATCCTGGGTTTGCTTCTTTGAGTTTTGCTCCTTATCAGTCTGCTGGTCTTCTCTTTGAGGATTTCTaGCCTTTGGCTTGCACGTCT +
Preference number: 2 (lower is better)
Translates to: ADPGFASLSFAPYQSAGLLFEDF*PLACTS
Trigger: AGACGTGCAAGCCAAAGGCCAGAAATCCTCAAAGAG...AAGACCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAGGATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 90 bp GCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAATATGGGATGTaGAGGCTTCAGGTAATATGGCATGCGCTGATAGAGCTTGGGATA +
Preference number: 2 (lower is better)
Translates to: AEVGVVFQGTAQYGM*RLQVIWHALIELGI
Trigger: TATCCCAAGCTCTATCAGCGCATGCCATATTACCTGAAGCCTCAACATCCCATATTGTGCAGTTCCCTGAAATACAACACCTACTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGGGTGGCAACCACAGTTaGGAACACAGATTGGAGGAG +
Preference number: 2 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQGGNHS*EHRLEE
Trigger: CTCCTCCAATCTGTGTTCTCAACTGTGGTTGCCACC...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR TCA 90 bp GTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCATTTGAGAAGGTTGTACAAGGTTGTTCACTATTTTaGGTAACATCCGAAGGCAAG +
Preference number: 2 (lower is better)
Translates to: VTQLGPAEAWFAFEKVVQGCSLF*VTSEGK
Trigger: CTTGCCTTCGGATGTTACTCAAAATAGTGAACAACC...TTGTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCTGTTTGACATGGGATaGTGTAGACTTAGATGGCAT +
Preference number: 2 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCLFDMG*CRLRWH
Trigger: ATGCCATCTAAGTCTACATCATCCCATGTCAAACAG...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp AGATTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGCTGTTTGACATGGGATaGTGTAGACTTAGATGGCAT +
Preference number: 2 (lower is better)
Translates to: RLSFWVLFPFGLLIFSLLLFDMG*CRLRWH
Trigger: ATGCCATCTAAGTCTACATCATCCCATGTCAAACAG...CAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp GGTAATATGGCATGCGCTGATAGAGCTTGGGATAGCATATCTTGGGAAGGTATGTGGGATGGTGTGTCTTaGGATAGCATATCTAGGGAT +
Preference number: 2 (lower is better)
Translates to: GNMACADRAWDSISWEGMWDGVS*DSISRD
Trigger: ATCCCTAGATATGCTATCTCAAGACACACCATCCCA...CATACCTTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp GGCTTGCTGATCTTCAGCTTGCTGATCTGGGAGTTGCTCTTTAGTTTGATTAAGAGATCTGGGGGCTGCTaGAGTAGGTGTTGTATTTCA +
Preference number: 2 (lower is better)
Translates to: GLLIFSLLIWELLFSLIKRSGGC*SRCCIS
Trigger: TGAAATACAACACCTACTTCAGCAGCCCCCAGATCT...CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp CTAGCTGAATGGACATATTTTCTGAGGGCTTTTTCTCTAGTGTGGGAGGCAAAGAAACAGAACCTCATCTaGCTGTGTCCAGCACTTGCT +
Preference number: 2 (lower is better)
Translates to: LAEWTYFLRAFSLVWEAKKQNLI*LCPALA
Trigger: AGCAAGTGCTGGACACAGTCAGATGAGGTTCTGTTT...CTTTGCCTCCCACACTAGAGAAAAAGCCCTCAGAAAATATGTCCATTCAGCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530662.5
3UTR-3UTR GCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCGTTATGTTGGGCTGTTaGGTGCTGGGTTTGGACTTC +
Preference number: 2 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISVMLGC*VLGLDF
Trigger: GAAGTCCAAACCCAGCACGCAACAGCCCAACATAAC...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp TCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGGAGCATATCTAGGGATTaGATATCTTGGGATGTCATG +
Preference number: 2 (lower is better)
Translates to: SFWVLFPFGLLIFSLLIWSISRD*ISWDVM
Trigger: CATGACATCCCAAGATATGCAATCCCTAGATATGCT...CCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGTGGAGTGACGCAGCTTaGTCCTGCAGAAGCTTGGTT +
Preference number: 2 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQWSDAA*SCRSLV
Trigger: AACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCA...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp TTGAGGCTTCAGGTAATATGGCATGCGCTGATAGAGCTTGGGATAGCATATCTTTCTACTGGTAGAGCTTaGGATGGCAAGTCTTCAGGT +
Preference number: 2 (lower is better)
Translates to: LRLQVIWHALIELGIAYLSTGRA*DGKSSG
Trigger: ACCTGAAGACTTGCCATCCCAAGCTCTACCAGTAGA...AAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACCTGAAGCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp ATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTAGGATTTCTGGCCTTTaGCTTGCACGTCTAAAGAAT +
Preference number: 2 (lower is better)
Translates to: ILGQKIDSPGLSSLEIAFRISGL*LARLKN
Trigger: ATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCT...AAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCAGCTTGCTGATCTaGGAGTTGCTCTTTAGTTTG +
Preference number: 2 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAFSLLI*ELLFSL
Trigger: CAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAA...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCTTTAGATTGTCCTTCTaGGTATTGTTCCCCTTTGGC +
Preference number: 2 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSFRLSF*VLFPFG
Trigger: GCCAAAGGGGAACAATACCCAGAAGGACAATCTAAA...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 90 bp TTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGGGAGTaGCTCTTTAGTTTGATTAAGTTGAGCTTGCTTATCTACGGAGTG +
Preference number: 2 (lower is better)
Translates to: LFPFGLLIFSLLIWE*LFSLIKLSLLIYGV
Trigger: CACTCCGTAGATAAGCAAGCTCAACTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTaGCTGATCTGGGAGTTGCTCTTTAGTTTGATTAAGTTGAGCTTG +
Preference number: 2 (lower is better)
Translates to: LSFWVLFPFGLLIFS*LIWELLFSLIKLSL
Trigger: CAAGCTCAACTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 90 bp TTGTCCATCTTTAGATTGTCCTTCTGGGTATTGTTCCCCTTTGGCTaGCTGATCTTCAGCTTGCTGATCTGGGAGTTGCTCTTTAGTTTG +
Preference number: 2 (lower is better)
Translates to: LSIFRLSFWVLFPFG*LIFSLLIWELLFSL
Trigger: CAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAATCTAAAGATGGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 90 bp TTGCTCCTTATCAGTCTGCTGGTCTTTAACTTGTCCATCTTTAGATaGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGC +
Preference number: 2 (lower is better)
Translates to: LLLISLLVFNLSIFR*SFWVLFPFGLLIFS
Trigger: GCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAATCTAAAGATGGACAAGTTAAAGACCAGCAGACTGATAAGGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCTGTGTAACTCTGGATTaGAGGTCTTGTTGGTCTTTA +
Preference number: 2 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSCVTLD*RSCWSL
Trigger: TAAAGACCAACAAGACCTTCAATCCAGAGTTACACA...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR TCA 90 bp TTGAGGCTTCAGGTAATATGGCATGCGCTGATAGAGCTTGGGATAGCATATCTTTGGCCAGAAGAAGAATaGAAATCTGCCTTCACGTCT +
Preference number: 2 (lower is better)
Translates to: LRLQVIWHALIELGIAYLWPEEE*KSAFTS
Trigger: AGACGTGAAGGCAGATTTTCATTCTTCTTCTGGCCA...AAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACCTGAAGCCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp AGATTAGAAGACTGTTTGACATGGGATGATGTAGACTTAGATGGCATGGTTTGTAAGAAGCTGATCCTCTaGTCATCTTGGGGCCGTGGA +
Preference number: 2 (lower is better)
Translates to: RLEDCLTWDDVDLDGMVCKKLIL*SSWGRG
Trigger: TCCACGGCCCCAAGATGATCAGAGGATCAGCTTCTT...ACAAACCATGCCATCTAAGTCTACATCATCCCATGTCAAACAGTCTTCTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp CAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTAATAGATCCTGTGTTTaGCAGTGCTTCATTTCAAAT +
Preference number: 2 (lower is better)
Translates to: QGILGQKIDSPGLSSLEINRSCV*QCFISN
Trigger: ATTTGAAATGAAGCACTGGCAAACACAGGATCTATT...AATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTTGGTATAGAGCTTTCTaGTTTAGGGCTTCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCWYRAF*FRASFS
Trigger: AGAGAAAGAAGCCCTAAAGCAGAAAGCTCTATACCA...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGGTTATGTTGGGCTGTTaGGTGCTGGGTTTGGACTTC +
Preference number: 2 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWVMLGC*VLGLDF
Trigger: GAAGTCCAAACCCAGCACGCAACAGCCCAACATAAC...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp TATCTTGGGATGTCATGTCATGAAACAGCATATCTTGAGATGATGTGTCTTGGGGACGCAGCTTGGTCCTaGAGAAGCTTGGTTTGCATT +
Preference number: 2 (lower is better)
Translates to: YLGMSCHETAYLEMMCLGDAAWS*RSLVCI
Trigger: AATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTC...CCCAAGACACATCATCTCAAGATATGCTGTTTCATGACATGACATCCCAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp AGCCAGTCTTTGATTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTGAGATTGCCAGCCTTTaGTTTGCTGATCTAAGGAAT +
Preference number: 2 (lower is better)
Translates to: SQSLICWSKDFCFGDCQPEIASL*FADLRN
Trigger: ATTCCTTAGATCAGCAAAGCAAAGGCTGGCAATCTC...AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTGTCCAGCCTGGAGATTaGCTTTGTGGAATTGCCAGA +
Preference number: 2 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIVQPGD*LCGIAR
Trigger: TCTGGCAATTCCACAAAGGCAATCTCCAGGCTGGAC...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGCATTCTAGGTTATGTTaGGCTGTTGCGTGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKHSRLC*AVACWV
Trigger: AACCCAGCACGCAACAGCCCAACATAACCTAGAATG...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp GTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCATTTGAGAAGGTTGTACAAACATTTCATGTCCCCTaGTTTGATGTCTCTAGTGTA +
Preference number: 2 (lower is better)
Translates to: VTQLGPAEAWFAFEKVVQTFHVP*FDVSSV
Trigger: TACACTAGAGACATCAAACCAGGGGACATGAAATGT...TTGTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp GGCATAACAGTTTTGGCACTTTCTCCACCTGAGCTTGCTGTCCTTCGGCTTGAAGTTGAGAACACAGATTaGAGGAGGCAATATTGTTTT +
Preference number: 2 (lower is better)
Translates to: GITVLALSPPELAVLRLEVENTD*RRQYCF
Trigger: AAAACAATATTGCCTCCTCCAATCTGTGTTCTCAAC...TTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCCAAAACTGTTATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp GGCATAACAGTTTTGGCACTTTCTCCACCTGAGCTTGCTGTCCTTCGGCTTGAATTGATCATTTTCTTCTaGGGCAGGTTGTTCACTATT +
Preference number: 2 (lower is better)
Translates to: GITVLALSPPELAVLRLELIIFF*GRLFTI
Trigger: AATAGTGAACAACCTGCCCCAGAAGAAAATGATCAA...TTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCCAAAACTGTTATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATTGATCATTTTCTTCTaGGGCAGGTTGTTCACTATT +
Preference number: 2 (lower is better)
Translates to: LPSRLLIAGPLRFALYISLIIFF*GRLFTI
Trigger: AATAGTGAACAACCTGCCCCAGAAGAAAATGATCAA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 90 bp GGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGTaGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: GLYLECLDILGYVGL*RAGFGLLGIELSAL
Trigger: TAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR TCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCTCTTCAGATTGCTGTTaGTCTTTTGGATCACATGAA +
Preference number: 2 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSSSDCC*SFGSHE
Trigger: TTCATGTGATCCAAAAGATCAACAGCAATCTGAAGA...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR TCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTCTTCAGATTGCTGTTaGTCTTTTGGATCACATGAA +
Preference number: 2 (lower is better)
Translates to: SRLCWAVACWVWTSWYRASSDCC*SFGSHE
Trigger: TTCATGTGATCCAAAAGATCAACAGCAATCTGAAGA...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR TCA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTCTTCAGATTGCTGTTaGTCTTTTGGATCACATGAA +
Preference number: 2 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLISSDCC*SFGSHE
Trigger: TTCATGTGATCCAAAAGATCAACAGCAATCTGAAGA...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTGCTGTCCTTCGGCTTaGACATTTTGGAATTGTCCT +
Preference number: 2 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISCCPSA*TFWNCP
Trigger: AGGACAATTCCAAAATGTTCAAGCCGAAGGACAGCA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATCTTGGCCAAAAGATTaGCAGTCCTGGGTTGTCCAG +
Preference number: 2 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTSWPKD*QSWVVQ
Trigger: CTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCAAATAGATCCTGTGTTTaGCAGTGCTTCATTTCAAAT +
Preference number: 2 (lower is better)
Translates to: LPSRLLIAGPLRFALYISNRSCV*QCFISN
Trigger: ATTTGAAATGAAGCACTGGCAAACACAGGATCTATT...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTTGTTGGGCTGTTGCGTaGTGGGTTTGGACTTCTTGG +
Preference number: 2 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGCWAVA*WVWTSW
Trigger: CCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACA...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTGTTGGGCTGTTGCGTaGTGGGTTTGGACTTCTTGG +
Preference number: 2 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLCWAVA*WVWTSW
Trigger: CCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTGTTGGGCTGTTGCGTaGTGGGTTTGGACTTCTTGG +
Preference number: 2 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLCWAVA*WVWTSW
Trigger: CCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGGTTATGTTGGGCTGTTaGGTGCTGGGTTTGGACTTC +
Preference number: 2 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVVMLGC*VLGLDF
Trigger: GAAGTCCAAACCCAGCACGCAACAGCCCAACATAAC...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCGTTATGTTGGGCTGTTaGGTGCTGGGTTTGGACTTC +
Preference number: 2 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSVMLGC*VLGLDF
Trigger: GAAGTCCAAACCCAGCACGCAACAGCCCAACATAAC...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGAGGTCCCCTGAGGTTTaGCCTATACATTTCATGTCC +
Preference number: 2 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWRSPEV*PIHFMS
Trigger: GGACATGAAATGTATAGGGCAAACCTCAGGGGACCT...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTAGGTCCCCTGAGGTTTaGCCTATACATTTCATGTCC +
Preference number: 2 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIRSPEV*PIHFMS
Trigger: GGACATGAAATGTATAGGGCAAACCTCAGGGGACCT...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCAGGTCCCCTGAGGTTTaGCCTATACATTTCATGTCC +
Preference number: 2 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIRSPEV*PIHFMS
Trigger: GGACATGAAATGTATAGGGCAAACCTCAGGGGACCT...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp GCTGATCCTGGGTTTGCTTCTTTGAGTTTTGCTCCTTATCAGTCTGCTGGTCTTTGCTGGTTTAAGGAATaGCGTCTTGAGGATTTTCTT +
Preference number: 2 (lower is better)
Translates to: ADPGFASLSFAPYQSAGLCWFKE*RLEDFL
Trigger: AAGAAAATCCTCAAGACGGCATTCCTTAAACCAGCA...AAGACCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAGGATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp GGCTTGCTGATCTTCAGCTTGCTGATCTGGGAGTTGCTCTTTAGTTTGATTAAGGAGATTGCCAGCCTTTaGTTTGCTGATCTAAGGAAT +
Preference number: 2 (lower is better)
Translates to: GLLIFSLLIWELLFSLIKEIASL*FADLRN
Trigger: ATTCCTTAGATCAGCAAAGCAAAGGCTGGCAATCTC...CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTGGTCTAAGGATTTCTaGTTTGGAGATTGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISWSKDF*FGDCQP
Trigger: AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp TTTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCGTTGCGTGCTGGGTTTaGACTTCTTGGTATAGAGCT +
Preference number: 2 (lower is better)
Translates to: FGRWKDTLLLFIWHKFSTVACWV*TSWYRA
Trigger: AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAAC...GGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTGGGCTGTTGCGTGCTaGGTTTGGACTTCTTGGTAT +
Preference number: 2 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSWAVAC*VWTSWY
Trigger: ATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTCATTCTAGGTTATGTTaGGCTGTTGCGTGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIHSRLC*AVACWV
Trigger: AACCCAGCACGCAACAGCCCAACATAACCTAGAATG...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGCATTCTAGGTTATGTTaGGCTGTTGCGTGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWHSRLC*AVACWV
Trigger: AACCCAGCACGCAACAGCCCAACATAACCTAGAATG...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCCATTCTAGGTTATGTTaGGCTGTTGCGTGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIHSRLC*AVACWV
Trigger: AACCCAGCACGCAACAGCCCAACATAACCTAGAATG...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp TCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGGTTGCTTTTGTTCATCTaGCACAAATTCTCTACCTTT +
Preference number: 2 (lower is better)
Translates to: SFWVLFPFGLLIFSLLIWLLLFI*HKFSTF
Trigger: AAAGGTAGAGAATTTGTGCCAGATGAACAAAAGCAA...CCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCGGTCCTGCAGAAGCTTaGTTTGCATTTGAGAAGGTT +
Preference number: 2 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISGPAEA*FAFEKV
Trigger: AACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACC...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTGAAGACTGTTTGACATaGGATGATGTAGACTTAGAT +
Preference number: 2 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAEDCLT*DDVDLD
Trigger: ATCTAAGTCTACATCATCCCATGTCAAACAGTCTTC...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGGTATGTCTTGAGGTaGCATGGCGTGGGATGGTGT +
Preference number: 2 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLRYVLR*HGVGWC
Trigger: ACACCATCCCACGCCATGCCACCTCAAGACATACCT...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGGGGAACTGCACAATATaGGATGTTGAGGCTTCAGGT +
Preference number: 2 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQGNCTI*DVEASG
Trigger: ACCTGAAGCCTCAACATCCCATATTGTGCAGTTCCC...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTAGTATTGCAAGGCTTTaGTTTGCTGGTTTAAGGAAT +
Preference number: 2 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCSIARL*FAGLRN
Trigger: ATTCCTTAAACCAGCAAACCAAAGCCTTGCAATACT...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGACATGTGTCTTGTACTaGGCTTTGGCCAGAAGAAGA +
Preference number: 2 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQTCVLY*ALARRR
Trigger: TCTTCTTCTGGCCAAAGCTCAGTACAAGACACATGT...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR TCA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGGGTTGTTCACTATTTTaGGTAACATCCGAAGGCAAG +
Preference number: 2 (lower is better)
Translates to: GLVGLYLECLDILGYVGLGCSLF*VTSEGK
Trigger: CTTGCCTTCGGATGTTACTCAAAATAGTGAACAACC...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp GCTGATCCTGGGTTTGCTTCTTTGAGTTTTGCTCCTTATCAGTCTGCTGGTCTTTTGTGCATTTGTTGTTaGATCATCACTGGAAAACTC +
Preference number: 2 (lower is better)
Translates to: ADPGFASLSFAPYQSAGLLCICC*IITGKL
Trigger: GAGTTTTCCAGTGATGATTCAACAACAAATGCACAA...AAGACCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAGGATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp GGTAATATGGCATGCGCTGATAGAGCTTGGGATAGCATATCTTGGGAAGGTATGAATGTAGAGTCTAGCTaGATGGACATATTTTCTGAG +
Preference number: 2 (lower is better)
Translates to: GNMACADRAWDSISWEGMNVESS*MDIFSE
Trigger: CTCAGAAAATATGTCCATTCAGCTAGACTCTACATT...CATACCTTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTTTGTTTCTCCAGCCCTaGGTTATCCAGTCAGGGGAT +
Preference number: 2 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGLFLQP*VIQSGD
Trigger: ATCCCCTGACTGGATAACTCAGGGCTGGAGAAACAA...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGAGGTCCCCTGAGGTTTaGCCTATACATTTCATGTCC +
Preference number: 2 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWRSPEV*PIHFMS
Trigger: GGACATGAAATGTATAGGGCAAACCTCAGGGGACCT...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTTGCGTGCTGGGTTTaGACTTCTTGGTATAGAGCT +
Preference number: 2 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWVACWV*TSWYRA
Trigger: AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAAC...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTTAATGGGGGCAGTGTaGTATTGGGTAGATTCTGCA +
Preference number: 2 (lower is better)
Translates to: FCFRASFSNRSCVCQCFILMGAV*YWVDSA
Trigger: TGCAGAATCTACCCAATACCACACTGCCCCCATTAA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp AGCCAGTCTTTGATTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTTTGATCATTTTCTTCTaGGGCAGGTTGTTCACTATT +
Preference number: 2 (lower is better)
Translates to: SQSLICWSKDFCFGDCQPLIIFF*GRLFTI
Trigger: AATAGTGAACAACCTGCCCCAGAAGAAAATGATCAA...AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATAGGCTTCAGGTAATATaGCATGCGCTGATAGAGCTT +
Preference number: 2 (lower is better)
Translates to: FEDFWPLACTSKECLLKYRLQVI*HALIEL
Trigger: AAGCTCTATCAGCGCATGCCATATTACCTGAAGCCT...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTGTGTAACTCTGGATTaGAGGTCTTGTTGGTCTTTA +
Preference number: 2 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISCVTLD*RSCWSL
Trigger: TAAAGACCAACAAGACCTTCAATCCAGAGTTACACA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR TCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTGGCCAGAAGAAGAATaGAAATCTGCCTTCACGTCT +
Preference number: 2 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSWPEEE*KSAFTS
Trigger: AGACGTGAAGGCAGATTTTCATTCTTCTTCTGGCCA...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR TCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATGGCCAGAAGAAGAATaGAAATCTGCCTTCACGTCT +
Preference number: 2 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTWPEEE*KSAFTS
Trigger: AGACGTGAAGGCAGATTTTCATTCTTCTTCTGGCCA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR TCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGGCCAGAAGAAGAATaGAAATCTGCCTTCACGTCT +
Preference number: 2 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMWPEEE*KSAFTS
Trigger: AGACGTGAAGGCAGATTTTCATTCTTCTTCTGGCCA...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR TCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGACATGTGTCTTGTACTaGGCTTTGGCCAGAAGAAGA +
Preference number: 2 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWTCVLY*ALARRR
Trigger: TCTTCTTCTGGCCAAAGCTCAGTACAAGACACATGT...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR TCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAACATGTGTCTTGTACTaGGCTTTGGCCAGAAGAAGA +
Preference number: 2 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTTCVLY*ALARRR
Trigger: TCTTCTTCTGGCCAAAGCTCAGTACAAGACACATGT...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGTGGTATAGAGCTTTCTaGTTTAGGGCTTCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: GLVGLYLECLDILGYVGLWYRAF*FRASFS
Trigger: AGAGAAAGAAGCCCTAAAGCAGAAAGCTCTATACCA...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGGTTGCGTGCTGGGTTTaGACTTCTTGGTATAGAGCT +
Preference number: 2 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLVACWV*TSWYRA
Trigger: AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAAC...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp GCTGATCCTGGGTTTGCTTCTTTGAGTTTTGCTCCTTATCAGTCTGCTGGTCTTTTGTTGAATCATCACTaGAAAACTCTTCTTGAAGCA +
Preference number: 2 (lower is better)
Translates to: ADPGFASLSFAPYQSAGLLLNHH*KTLLEA
Trigger: TGCTTCAAGAAGAGTTTTCCAGTGATGATTCAACAA...AAGACCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAGGATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATGCGCTGATAGAGCTTaGGATAGCATATCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTCADRA*DSISWE
Trigger: TTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGTTCAGCTTGCTGATCTaGGAGTTGCTCTTTAGTTTG +
Preference number: 2 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQFSLLI*ELLFSL
Trigger: CAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAA...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGCTGGGTTTGCTTCTTTaGGTTTTGCTCCTTATCAGT +
Preference number: 2 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVLGLLL*VLLLIS
Trigger: ACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAG...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTGGTATAGAGCTTTCTaGTTTAGGGCTTCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWWYRAF*FRASFS
Trigger: AGAGAAAGAAGCCCTAAAGCAGAAAGCTCTATACCA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTAGCATATCTAGGGATTaGATATCTTGGGATGTCATG +
Preference number: 2 (lower is better)
Translates to: FCFRASFSNRSCVCQCFISISRD*ISWDVM
Trigger: CATGACATCCCAAGATATGCAATCCCTAGATATGCT...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGCTTGCTTCTAAAGGATaGAATAGTCACAGAGATGCT +
Preference number: 2 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWLASKG*NSHRDA
Trigger: AGCATCTCTGTGACTATTGCATCCTTTAGAAGCAAG...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530662.5
3UTR-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGACATTTCATGTCCCCTaGTTTGATGTCTCTAGTGTA +
Preference number: 2 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWTFHVP*FDVSSV
Trigger: TACACTAGAGACATCAAACCAGGGGACATGAAATGT...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp TATCTTGGGATGTCATGTCATGAAACAGCATATCTTGAGATGATGTGTCTTGGGACATTTCATGTCCCCTaGTTTGATGTCTCTAGTGTA +
Preference number: 2 (lower is better)
Translates to: YLGMSCHETAYLEMMCLGTFHVP*FDVSSV
Trigger: TACACTAGAGACATCAAACCAGGGGACATGAAATGT...CCCAAGACACATCATCTCAAGATATGCTGTTTCATGACATGACATCCCAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp CTAGCTGAATGGACATATTTTCTGAGGGCTTTTTCTCTAGTGTGGGAGGCAAAGTTGTTGAATCATCACTaGAAAACTCTTCTTGAAGCA +
Preference number: 2 (lower is better)
Translates to: LAEWTYFLRAFSLVWEAKLLNHH*KTLLEA
Trigger: TGCTTCAAGAAGAGTTTTCCAGTGATGATTCAACAA...CTTTGCCTCCCACACTAGAGAAAAAGCCCTCAGAAAATATGTCCATTCAGCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGCCTTTATTACCTGGTTaGGAGACTAAAGGACTCCTA +
Preference number: 2 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWPLLPG*ETKGLL
Trigger: TAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGG...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATGAGGATTTTCTTCTATaGAGTTCCTCCTCAGATTTC +
Preference number: 2 (lower is better)
Translates to: FEDFWPLACTSKECLLKYEDFLL*SSSSDF
Trigger: GAAATCTGAGGAGGAACTCCATAGAAGAAAATCCTC...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGGGTATTGTTCCCCTTTaGCTTGCTGATCTTCAGCTT +
Preference number: 2 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLGIVPL*LADLQL
Trigger: AAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACC...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGTCCTTATCAGTCTGCTaGTCTTTAACTTGTCCATCT +
Preference number: 2 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQSLSVC*SLTCPS
Trigger: AGATGGACAAGTTAAAGACCAGCAGACTGATAAGGA...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTGGGATTCTGAATCTTaGCATAACAGTTTTGGCACT +
Preference number: 2 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIWDSES*HNSFGT
Trigger: AGTGCCAAAACTGTTATGCCAAGATTCAGAATCCCA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 90 bp TATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATaGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTG +
Preference number: 2 (lower is better)
Translates to: YCFSQFNSINGGSVV*GRFCMLVRVFRLLL
Trigger: CAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR TCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGTGTGTAACTCTGGATTaGAGGTCTTGTTGGTCTTTA +
Preference number: 2 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWCVTLD*RSCWSL
Trigger: TAAAGACCAACAAGACCTTCAATCCAGAGTTACACA...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR TCA 90 bp AGATTAGAAGACTGTTTGACATGGGATGATGTAGACTTAGATGGCATGGTTTGTTGTGTAACTCTGGATTaGAGGTCTTGTTGGTCTTTA +
Preference number: 2 (lower is better)
Translates to: RLEDCLTWDDVDLDGMVCCVTLD*RSCWSL
Trigger: TAAAGACCAACAAGACCTTCAATCCAGAGTTACACA...ACAAACCATGCCATCTAAGTCTACATCATCCCATGTCAAACAGTCTTCTAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTTGTGCATTTGTTGTTaGATCATCACTGGAAAACTC +
Preference number: 2 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWLCICC*IITGKL
Trigger: GAGTTTTCCAGTGATGATTCAACAACAAATGCACAA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTTGTGCATTTGTTGTTaGATCATCACTGGAAAACTC +
Preference number: 2 (lower is better)
Translates to: FCFRASFSNRSCVCQCFILCICC*IITGKL
Trigger: GAGTTTTCCAGTGATGATTCAACAACAAATGCACAA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATTTCAATTTCTTCCTCTaGAAATTTGGGAGATGGAAG +
Preference number: 2 (lower is better)
Translates to: FEDFWPLACTSKECLLKYFNFFL*KFGRWK
Trigger: CTTCCATCTCCCAAATTTTCAGAGGAAGAAATTGAA...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATAATGTAGAGTCTAGCTaGATGGACATATTTTCTGAG +
Preference number: 2 (lower is better)
Translates to: FEDFWPLACTSKECLLKYNVESS*MDIFSE
Trigger: CTCAGAAAATATGTCCATTCAGCTAGACTCTACATT...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTAATAGATCCTGTGTTTaGCAGTGCTTCATTTCAAAT +
Preference number: 2 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPNRSCV*QCFISN
Trigger: ATTTGAAATGAAGCACTGGCAAACACAGGATCTATT...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGTGGTATAGAGCTTTCTaGTTTAGGGCTTCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWWYRAF*FRASFS
Trigger: AGAGAAAGAAGCCCTAAAGCAGAAAGCTCTATACCA...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATGGTATAGAGCTTTCTaGTTTAGGGCTTCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTWYRAF*FRASFS
Trigger: AGAGAAAGAAGCCCTAAAGCAGAAAGCTCTATACCA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGGTATAGAGCTTTCTaGTTTAGGGCTTCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMWYRAF*FRASFS
Trigger: AGAGAAAGAAGCCCTAAAGCAGAAAGCTCTATACCA...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR GCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTGTCTCCTTAAGTATTaGAAGGCTTTGGTTTGCTGG +
Preference number: 2 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLCLLKY*KALVCW
Trigger: CCAGCAAACCAAAGCCTTGCAATACTTAAGGAGACA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGACATTTCATGTCCCCTaGTTTGATGTCTCTAGTGTA +
Preference number: 2 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMTFHVP*FDVSSV
Trigger: TACACTAGAGACATCAAACCAGGGGACATGAAATGT...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCACATTTCATGTCCCCTaGTTTGATGTCTCTAGTGTA +
Preference number: 2 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSTFHVP*FDVSSV
Trigger: TACACTAGAGACATCAAACCAGGGGACATGAAATGT...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAACATTTCATGTCCCCTaGTTTGATGTCTCTAGTGTA +
Preference number: 2 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTTFHVP*FDVSSV
Trigger: TACACTAGAGACATCAAACCAGGGGACATGAAATGT...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGTGGTATTGCTGTATTTaGGATTCTGAATCTTGGCAT +
Preference number: 2 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQWYCCI*DSESWH
Trigger: ATGCCAAGATTCAGAATCCCAAATACAGCAATACCA...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR TCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTGTGTAACTCTGGATTaGAGGTCTTGTTGGTCTTTA +
Preference number: 2 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLCVTLD*RSCWSL
Trigger: TAAAGACCAACAAGACCTTCAATCCAGAGTTACACA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR TCA 90 bp AGATTAGAAGACTGTTTGACATGGGATGATGTAGACTTAGATGGCATGGTTTGTTTCAATTTCTTCCTCTaGAAATTTGGGAGATGGAAG +
Preference number: 2 (lower is better)
Translates to: RLEDCLTWDDVDLDGMVCFNFFL*KFGRWK
Trigger: CTTCCATCTCCCAAATTTTCAGAGGAAGAAATTGAA...ACAAACCATGCCATCTAAGTCTACATCATCCCATGTCAAACAGTCTTCTAATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAATAGATCCTGTGTTTaGCAGTGCTTCATTTCAAAT +
Preference number: 2 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQNRSCV*QCFISN
Trigger: ATTTGAAATGAAGCACTGGCAAACACAGGATCTATT...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGACATTTCATGTCCCCTaGTTTGATGTCTCTAGTGTA +
Preference number: 2 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLTFHVP*FDVSSV
Trigger: TACACTAGAGACATCAAACCAGGGGACATGAAATGT...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CCA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATTTGCTTTTGTTCATCTaGCACAAATTCTCTACCTTT +
Preference number: 2 (lower is better)
Translates to: FEDFWPLACTSKECLLKYLLLFI*HKFSTF
Trigger: AAAGGTAGAGAATTTGTGCCAGATGAACAAAAGCAA...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGGAGGATTTTCTTCTATaGAGTTCCTCCTCAGATTTC +
Preference number: 2 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLEDFLL*SSSSDF
Trigger: GAAATCTGAGGAGGAACTCCATAGAAGAAAATCCTC...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGAGTATTGCAAGGCTTTaGTTTGCTGGTTTAAGGAAT +
Preference number: 2 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVSIARL*FAGLRN
Trigger: ATTCCTTAAACCAGCAAACCAAAGCCTTGCAATACT...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTTGCTTTTGTTCATCTaGCACAAATTCTCTACCTTT +
Preference number: 2 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMLLLFI*HKFSTF
Trigger: AAAGGTAGAGAATTTGTGCCAGATGAACAAAAGCAA...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR GCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTAATAGATCCTGTGTTTaGCAGTGCTTCATTTCAAAT +
Preference number: 2 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLNRSCV*QCFISN
Trigger: ATTTGAAATGAAGCACTGGCAAACACAGGATCTATT...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTGGTTATGTTGGGCTGTaGCGTGCTGGGTTTGGACTT +
Preference number: 3 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAGYVGL*RAGFGL
Trigger: AAGTCCAAACCCAGCACGCAACAGCCCAACATAACC...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp ATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTTTTCTCCACCTGAGCTaGCTGTCCTTCGGCTTGAAC +
Preference number: 3 (lower is better)
Translates to: ILGQKIDSPGLSSLEIAFFLHLS*LSFGLN
Trigger: GTTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAA...AAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR GCA 72 bp GCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTaGCCTATACATTTCATGTCCCCTGGTTTGATGTCT +
Preference number: 3 (lower is better)
Translates to: AFTSSDCRSPEV*PIHFMSPGLMS
Trigger: AGACATCAAACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCGGGGGCAGTGTGGTATaGGGTAGATTCTGCATGTTA +
Preference number: 3 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSGGSVV*GRFCML
Trigger: TAACATGCAGAATCTACCCAATACCACACTGCCCCC...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTGGGGGCAGTGTGGTATaGGGTAGATTCTGCATGTTA +
Preference number: 3 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAGGSVV*GRFCML
Trigger: TAACATGCAGAATCTACCCAATACCACACTGCCCCC...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp GGGAAGGTATGTCTTGAGGTGGCATGGCGTGGGATGGTGTGTCTTGAGATAGCAGTAAGAACAAATTGTTaGAGTGCTCAGCATGCCCTT +
Preference number: 3 (lower is better)
Translates to: GKVCLEVAWRGMVCLEIAVRTNC*SAQHAL
Trigger: AAGGGCATGCTGAGCACTCAAACAATTTGTTCTTAC...TGCTATCTCAAGACACACCATCCCACGCCATGCCACCTCAAGACATACCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp GGCATAACAGTTTTGGCACTTTCTCCACCTGAGCTTGCTGTCCTTCGGCTTGAACTAAGGATTTCTGCTTaGGAGATTGCCAGCCTTTGC +
Preference number: 3 (lower is better)
Translates to: GITVLALSPPELAVLRLELRISA*EIASLC
Trigger: GCAAAGGCTGGCAATCTCCAAAGCAGAAATCCTTAG...TTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCCAAAACTGTTATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp CAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTGTGGAATTGTTGCTGATCTTCAGCTaGCTGATCTGGGAGTTGCTC +
Preference number: 3 (lower is better)
Translates to: QKIDSPGLSSLEIAFVELLLIFS*LIWELL
Trigger: GAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAA...CAATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGGATTGAAGGTCTTGTaGGTCTTTATCTTGAGTGTC +
Preference number: 3 (lower is better)
Translates to: RLLIAGPLRFALYISCPLGLKVL*VFILSV
Trigger: GACACTCAAGATAAAGACCAACAAGACCTTCAATCC...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp CAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGTAAGAACAAATTGTTaGAGTGCTCAGCATGCCCTT +
Preference number: 3 (lower is better)
Translates to: QGILGQKIDSPGLSSLEIVRTNC*SAQHAL
Trigger: AAGGGCATGCTGAGCACTCAAACAATTTGTTCTTAC...AATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCTAAGGAATGCCTCTTaGAGGATTTCTGGCCTTTGG +
Preference number: 3 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSLRNAS*RISGLW
Trigger: CCAAAGGCCAGAAATCCTCAAAGAGGCATTCCTTAG...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGGTTCTTCTGGGGCAGGTaGTTCACTATTTTGAGTAAC +
Preference number: 3 (lower is better)
Translates to: SFWVLFPFGLLIFSLLIWFFWGR*FTILSN
Trigger: GTTACTCAAAATAGTGAACAACCTGCCCCAGAAGAA...CCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGGAGATGGAAGGATACTTaGCTTTTGTTCATCTGGCAC +
Preference number: 3 (lower is better)
Translates to: SFWVLFPFGLLIFSLLIWRWKDT*LLFIWH
Trigger: GTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCT...CCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCGCACAATATGGGATGTaGAGGCTTCAGGTAATATGG +
Preference number: 3 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLIAQYGM*RLQVIW
Trigger: CCATATTACCTGAAGCCTCAACATCCCATATTGTGC...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCCGGCTGGTCTTCAGTTaGCTGATCCTGGGTTTGCTT +
Preference number: 3 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISRLVFS*LILGLL
Trigger: AAGCAAACCCAGGATCAGCAAACTGAAGACCAGCCG...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp CAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTGTGGAATTGGACTGTGTCCAGCACTaGCTTCTAAAGGATGCAATA +
Preference number: 3 (lower is better)
Translates to: QKIDSPGLSSLEIAFVELDCVQH*LLKDAI
Trigger: TATTGCATCCTTTAGAAGCAAGTGCTGGACACAGTC...CAATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530662.5
3UTR TCA 72 bp GATTTCTTCTCTTGGGCCGGCTGGTCTTCAGTTTGCTaGTCCTGGGTTTGCTTCTTTGAGTTTTGCTCCTTA +
Preference number: 3 (lower is better)
Translates to: DFFSWAGWSSVC*SWVCFFEFCSL
Trigger: TAAGGAGCAAAACTCAAAGAAGCAAACCCAGGATCAGCAAACTGAAGACCAGCCGGCCCAAGAGAAGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CCA 72 bp TCTTCGAGTTTTAGTGCAGAATGGGATGGAAAAACTTaGAGTGACGCAGCTTGGTCCTGCAGAAGCTTGGTT +
Preference number: 3 (lower is better)
Translates to: SSSFSAEWDGKT*SDAAWSCRSLV
Trigger: AACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCATTCTGCACTAAAACTCGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CCA 72 bp TTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTaGAGATTGCCTTTGTGGAATTGCCAGAATTGGTAT +
Preference number: 3 (lower is better)
Translates to: LAKRLTVLGCPA*RLPLWNCQNWY
Trigger: ATACCAATTCTGGCAATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGGGTTATGTTGGGCTGTaGCGTGCTGGGTTTGGACTT +
Preference number: 3 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWGYVGL*RAGFGL
Trigger: AAGTCCAAACCCAGCACGCAACAGCCCAACATAACC...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCGGATTGAAGGTCTTGTaGGTCTTTATCTTGAGTGTC +
Preference number: 3 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLIGLKVL*VFILSV
Trigger: GACACTCAAGATAAAGACCAACAAGACCTTCAATCC...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp AGATTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGGTCAGAGTCTTCAGATaGCTGTTGATCTTTTGGATC +
Preference number: 3 (lower is better)
Translates to: RLSFWVLFPFGLLIFSLLVRVFR*LLIFWI
Trigger: GATCCAAAAGATCAACAGCAATCTGAAGACTCTGAC...CAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp AGCCAGTCTTTGATTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTGCACAATATGGGATGTaGAGGCTTCAGGTAATATGG +
Preference number: 3 (lower is better)
Translates to: SQSLICWSKDFCFGDCQPAQYGM*RLQVIW
Trigger: CCATATTACCTGAAGCCTCAACATCCCATATTGTGC...AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTTGATTAAGTTGAGCTaGCTTATCTACGGAGTGCCT +
Preference number: 3 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLILIKLS*LIYGVP
Trigger: AGGCACTCCGTAGATAAGCAAGCTCAACTTAATCAA...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp GGCATAACAGTTTTGGCACTTTCTCCACCTGAGCTTGCTGTCCTTCGGCTTGAATTGTCCATCTTTAGATaGTCCTTCTGGGTATTGTTC +
Preference number: 3 (lower is better)
Translates to: GITVLALSPPELAVLRLELSIFR*SFWVLF
Trigger: GAACAATACCCAGAAGGACAATCTAAAGATGGACAA...TTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCCAAAACTGTTATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGCGGGGATTTCTTCTCTaGGGCCGGCTGGTCTTCAGT +
Preference number: 3 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLRGFLL*GRLVFS
Trigger: ACTGAAGACCAGCCGGCCCAAGAGAAGAAATCCCCG...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTATTGCCTTTGTGGAATaGCCAGAATTGGTATTGCTG +
Preference number: 3 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCIAFVE*PELVLL
Trigger: CAGCAATACCAATTCTGGCAATTCCACAAAGGCAAT...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR TCA 72 bp CATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGAATaGAAATCTGCCTTCACGTCTTCTGATTGCAGGTCC +
Preference number: 3 (lower is better)
Translates to: HVSCTELWPEEE*KSAFTSSDCRS
Trigger: GGACCTGCAATCAGAAGACGTGAAGGCAGATTTTCATTCTTCTTCTGGCCAAAGCTCAGTACAAGACACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR CCA 72 bp ATGGTTTGTTCTGACAGGCCTTCTACTGGTAGAGCTTaGGATGGCAAGTCTTCAGGTGATATATCTTCGAGT +
Preference number: 3 (lower is better)
Translates to: MVCSDRPSTGRA*DGKSSGDISSS
Trigger: ACTCGAAGATATATCACCTGAAGACTTGCCATCCCAAGCTCTACCAGTAGAAGGCCTGTCAGAACAAACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGGTTATGTTGGGCTGTaGCGTGCTGGGTTTGGACTT +
Preference number: 3 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGAGYVGL*RAGFGL
Trigger: AAGTCCAAACCCAGCACGCAACAGCCCAACATAACC...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAGGTTATGTTGGGCTGTaGCGTGCTGGGTTTGGACTT +
Preference number: 3 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTGYVGL*RAGFGL
Trigger: AAGTCCAAACCCAGCACGCAACAGCCCAACATAACC...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp GTTGAAGATCTGGGGGCTGCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAATCTGGATTGAAGGTCTaGTTGGTCTTTATCTTGAGT +
Preference number: 3 (lower is better)
Translates to: VEDLGAAEVGVVFQGTAQSGLKV*LVFILS
Trigger: ACTCAAGATAAAGACCAACAAGACCTTCAATCCAGA...TTGTGCAGTTCCCTGAAATACAACACCTACTTCAGCAGCCCCCAGATCTTCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp AGCCAGTCTTTGATTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTGTCAGAGTCTTCAGATaGCTGTTGATCTTTTGGATC +
Preference number: 3 (lower is better)
Translates to: SQSLICWSKDFCFGDCQPVRVFR*LLIFWI
Trigger: GATCCAAAAGATCAACAGCAATCTGAAGACTCTGAC...AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATGGGGGCAGTGTGGTATaGGGTAGATTCTGCATGTTA +
Preference number: 3 (lower is better)
Translates to: FEDFWPLACTSKECLLKYGGSVV*GRFCML
Trigger: TAACATGCAGAATCTACCCAATACCACACTGCCCCC...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTAGGTTGTTCACTATTTaGAGTAACATCCGAAGGCAA +
Preference number: 3 (lower is better)
Translates to: SRLCWAVACWVWTSWYRARLFTI*SNIRRQ
Trigger: TTGCCTTCGGATGTTACTCAAAATAGTGAACAACCT...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR TCA 72 bp TATCTACGGAGTGCCTCTTTGGGGATAGCCAGTCTTTaGTTTGCTGGTCTAAGGATTTCTGCTTTGGAGATT +
Preference number: 3 (lower is better)
Translates to: YLRSASLGIASL*FAGLRISALEI
Trigger: AATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCTATCCCCAAAGAGGCACTCCGTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR TCA 72 bp CTGGTCTTCAGTTTGCTGATCCTGGGTTTGCTTCTTTaGGTTTTGCTCCTTATCAGTCTGCTGGTCTTTAAC +
Preference number: 3 (lower is better)
Translates to: LVFSLLILGLLL*VLLLISLLVFN
Trigger: GTTAAAGACCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAGGATCAGCAAACTGAAGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CCA 72 bp AGTTATTACAATGATGATGGTAGTGCAGTGACCAAATaGAGTTGCTTCTTTTGCCGTGAAGGGAGCTGCCTT +
Preference number: 3 (lower is better)
Translates to: SYYNDDGSAVTK*SCFFCREGSCL
Trigger: AAGGCAGCTCCCTTCACGGCAAAAGAAGCAACTCCATTTGGTCACTGCACTACCATCATCATTGTAATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531949.1
3UTR CCA 72 bp TCTTCAGGTGATATATCTTCGAGTTTTAGTGCAGAATaGGATGGAAAAACTTGGAGTGACGCAGCTTGGTCC +
Preference number: 3 (lower is better)
Translates to: SSGDISSSFSAE*DGKTWSDAAWS
Trigger: GGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCATTCTGCACTAAAACTCGAAGATATATCACCTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CCA 72 bp ACTGCACAATATGGGATGTTGAGGCTTCAGGTAATATaGCATGCGCTGATAGAGCTTGGGATAGCATATCTT +
Preference number: 3 (lower is better)
Translates to: TAQYGMLRLQVI*HALIELGIAYL
Trigger: AAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACCTGAAGCCTCAACATCCCATATTGTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CCA 72 bp TTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTaGGAGTTGCTCTTTAGTTTGATTAAGTTGAGCTTG +
Preference number: 3 (lower is better)
Translates to: FPFGLLIFSLLI*ELLFSLIKLSL
Trigger: CAAGCTCAACTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGGTTATGTTGGGCTGTaGCGTGCTGGGTTTGGACTT +
Preference number: 3 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLGYVGL*RAGFGL
Trigger: AAGTCCAAACCCAGCACGCAACAGCCCAACATAACC...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGGGGGGCAGTGTGGTATaGGGTAGATTCTGCATGTTA +
Preference number: 3 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVGGSVV*GRFCML
Trigger: TAACATGCAGAATCTACCCAATACCACACTGCCCCC...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp GTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCATTTGAGAAGGTTGTACAAAAGGATACTTTGCTTTaGTTCATCTGGCACAAATTC +
Preference number: 3 (lower is better)
Translates to: VTQLGPAEAWFAFEKVVQKDTLL*FIWHKF
Trigger: GAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTT...TTGTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTGAGGCTTCAGGTAATATGGCATGCGCTGATAGAGCTTGGGATAGCATATCTTAGATGGAAGGATACTTaGCTTTTGTTCATCTGGCAC +
Preference number: 3 (lower is better)
Translates to: LRLQVIWHALIELGIAYLRWKDT*LLFIWH
Trigger: GTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCT...AAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACCTGAAGCCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp CTAGCTGAATGGACATATTTTCTGAGGGCTTTTTCTCTAGTGTGGGAGGCAAAGAGATGGAAGGATACTTaGCTTTTGTTCATCTGGCAC +
Preference number: 3 (lower is better)
Translates to: LAEWTYFLRAFSLVWEAKRWKDT*LLFIWH
Trigger: GTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCT...CTTTGCCTCCCACACTAGAGAAAAAGCCCTCAGAAAATATGTCCATTCAGCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCCTGCAGAAGCTTGGTTaGCATTTGAGAAGGTTGTAC +
Preference number: 3 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISLQKLG*HLRRLY
Trigger: GTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAG...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGTTTCTGCTTTGGAGATaGCCAGCCTTTGCTTTGCTG +
Preference number: 3 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQFLLWR*PAFALL
Trigger: CAGCAAAGCAAAGGCTGGCAATCTCCAAAGCAGAAA...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR GCA 72 bp AAGTATTGCAAGGCTTTGGTTTGCTGGTTTAAGGAATaGCGTCTTGAGGATTTTCTTCTATGGAGTTCCTCC +
Preference number: 3 (lower is better)
Translates to: KYCKALVCWFKE*RLEDFLLWSSS
Trigger: GGAGGAACTCCATAGAAGAAAATCCTCAAGACGGCATTCCTTAAACCAGCAAACCAAAGCCTTGCAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTGAGGCTTCAGGTAATATGGCATGCGCTGATAGAGCTTGGGATAGCATATCTTTTGTGTAACTCTGGATaGAAGGTCTTGTTGGTCTTT +
Preference number: 3 (lower is better)
Translates to: LRLQVIWHALIELGIAYLLCNSG*KVLLVF
Trigger: AAAGACCAACAAGACCTTCAATCCAGAGTTACACAA...AAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACCTGAAGCCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTGGGGGCAGTGTGGTATaGGGTAGATTCTGCATGTTA +
Preference number: 3 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGGGSVV*GRFCML
Trigger: TAACATGCAGAATCTACCCAATACCACACTGCCCCC...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCGTAAGAACAAATTGTTaGAGTGCTCAGCATGCCCTT +
Preference number: 3 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISVRTNC*SAQHAL
Trigger: AAGGGCATGCTGAGCACTCAAACAATTTGTTCTTAC...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp AGCCAGTCTTTGATTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTTTAAGTAAGAACAAATaGTTTGAGTGCTCAGCATGC +
Preference number: 3 (lower is better)
Translates to: SQSLICWSKDFCFGDCQPLSKNK*FECSAC
Trigger: GCATGCTGAGCACTCAAACAATTTGTTCTTACTTAA...AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTTCTTCTGGGGCAGGTaGTTCACTATTTTGAGTAAC +
Preference number: 3 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISFFWGR*FTILSN
Trigger: GTTACTCAAAATAGTGAACAACCTGCCCCAGAAGAA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTCTGCAGAAGCTTGGTTaGCATTTGAGAAGGTTGTAC +
Preference number: 3 (lower is better)
Translates to: FCFRASFSNRSCVCQCFILQKLG*HLRRLY
Trigger: GTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAG...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGCTGCAGAAGCTTGGTTaGCATTTGAGAAGGTTGTAC +
Preference number: 3 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQLQKLG*HLRRLY
Trigger: GTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAG...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp GCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAATATGGGATGTTGAGGCTTAGATTAGAAGACTGTTaGACATGGGATGATGTAGAC +
Preference number: 3 (lower is better)
Translates to: AEVGVVFQGTAQYGMLRLRLEDC*TWDDVD
Trigger: GTCTACATCATCCCATGTCAAACAGTCTTCTAATCT...AAGCCTCAACATCCCATATTGTGCAGTTCCCTGAAATACAACACCTACTTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACACTAAGGATTTCTGCTTaGGAGATTGCCAGCCTTTGC +
Preference number: 3 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTLRISA*EIASLC
Trigger: GCAAAGGCTGGCAATCTCCAAAGCAGAAATCCTTAG...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTTCGGCTTGAACATTTaGGAATTGTCCTTTCGGGGA +
Preference number: 3 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIFGLNI*ELSFRG
Trigger: TCCCCGAAAGGACAATTCCAAAATGTTCAAGCCGAA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGCTTGGCATAACAGTTTaGGCACTTTCTCCACCTGAG +
Preference number: 3 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVLGITV*ALSPPE
Trigger: CTCAGGTGGAGAAAGTGCCAAAACTGTTATGCCAAG...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527841.5
ENST00000530662.5
3UTR CCA 72 bp TCATCTGGCACAAATTCTCTACCTTTATTACCTGGTTaGGAGACTAAAGGACTCCTAGAGAGTGTTAACTTG +
Preference number: 3 (lower is better)
Translates to: SSGTNSLPLLPG*ETKGLLESVNL
Trigger: CAAGTTAACACTCTCTAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGGTAGAGAATTTGTGCCAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CCA 72 bp TGGTTTAAGGAATGCCGTCTTGAGGATTTTCTTCTATaGAGTTCCTCCTCAGATTTCCATTCTTTGGTCTCT +
Preference number: 3 (lower is better)
Translates to: WFKECRLEDFLL*SSSSDFHSLVS
Trigger: AGAGACCAAAGAATGGAAATCTGAGGAGGAACTCCATAGAAGAAAATCCTCAAGACGGCATTCCTTAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CCA 72 bp GATCTAAGGAATGCCTCTTTGAGGATTTCTGGCCTTTaGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATT +
Preference number: 3 (lower is better)
Translates to: DLRNASLRISGL*LARLKNVSLSI
Trigger: AATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAAGAGGCATTCCTTAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTTCTTCTGGGGCAGGTaGTTCACTATTTTGAGTAAC +
Preference number: 3 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIFFWGR*FTILSN
Trigger: GTTACTCAAAATAGTGAACAACCTGCCCCAGAAGAA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp CTAGCTGAATGGACATATTTTCTGAGGGCTTTTTCTCTAGTGTGGGAGGCAAAGAAGGATACTTTGCTTTaGTTCATCTGGCACAAATTC +
Preference number: 3 (lower is better)
Translates to: LAEWTYFLRAFSLVWEAKKDTLL*FIWHKF
Trigger: GAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTT...CTTTGCCTCCCACACTAGAGAAAAAGCCCTCAGAAAATATGTCCATTCAGCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGCTAAGGAATGCCTCTTaGAGGATTTCTGGCCTTTGG +
Preference number: 3 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLLRNAS*RISGLW
Trigger: CCAAAGGCCAGAAATCCTCAAAGAGGCATTCCTTAG...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCGGCTTGAACATTTaGGAATTGTCCTTTCGGGGA +
Preference number: 3 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTFGLNI*ELSFRG
Trigger: TCCCCGAAAGGACAATTCCAAAATGTTCAAGCCGAA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTTCTTGGCCAAAAGATaGACAGTCCTGGGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLFLAKR*TVLGCP
Trigger: TGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGGATTGAAGGTCTTGTaGGTCTTTATCTTGAGTGTC +
Preference number: 3 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGAGLKVL*VFILSV
Trigger: GACACTCAAGATAAAGACCAACAAGACCTTCAATCC...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTCTGGATTGAAGGTCTaGTTGGTCTTTATCTTGAGT +
Preference number: 3 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWSGLKV*LVFILS
Trigger: ACTCAAGATAAAGACCAACAAGACCTTCAATCCAGA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATTCTGGATTGAAGGTCTaGTTGGTCTTTATCTTGAGT +
Preference number: 3 (lower is better)
Translates to: FEDFWPLACTSKECLLKYSGLKV*LVFILS
Trigger: ACTCAAGATAAAGACCAACAAGACCTTCAATCCAGA...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTTGTGTAACTCTGGATaGAAGGTCTTGTTGGTCTTT +
Preference number: 3 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWLCNSG*KVLLVF
Trigger: AAAGACCAACAAGACCTTCAATCCAGAGTTACACAA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp TATCTTGGGATGTCATGTCATGAAACAGCATATCTTGAGATGATGTGTCTTGGGTTGTGTAACTCTGGATaGAAGGTCTTGTTGGTCTTT +
Preference number: 3 (lower is better)
Translates to: YLGMSCHETAYLEMMCLGLCNSG*KVLLVF
Trigger: AAAGACCAACAAGACCTTCAATCCAGAGTTACACAA...CCCAAGACACATCATCTCAAGATATGCTGTTTCATGACATGACATCCCAAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCTTGTGTAACTCTGGATaGAAGGTCTTGTTGGTCTTT +
Preference number: 3 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWILCNSG*KVLLVF
Trigger: AAAGACCAACAAGACCTTCAATCCAGAGTTACACAA...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTCAGAGTCTTCAGATaGCTGTTGATCTTTTGGATC +
Preference number: 3 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWVRVFR*LLIFWI
Trigger: GATCCAAAAGATCAACAGCAATCTGAAGACTCTGAC...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGGTCAGAGTCTTCAGATaGCTGTTGATCTTTTGGATC +
Preference number: 3 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVVRVFR*LLIFWI
Trigger: GATCCAAAAGATCAACAGCAATCTGAAGACTCTGAC...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGGTAAGAACAAATTGTTaGAGTGCTCAGCATGCCCTT +
Preference number: 3 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVVRTNC*SAQHAL
Trigger: AAGGGCATGCTGAGCACTCAAACAATTTGTTCTTAC...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp TTTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCAGGTTGTTCACTATTTaGAGTAACATCCGAAGGCAA +
Preference number: 3 (lower is better)
Translates to: FGRWKDTLLLFIWHKFSTRLFTI*SNIRRQ
Trigger: TTGCCTTCGGATGTTACTCAAAATAGTGAACAACCT...GGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAGATTAGAAGACTGTTaGACATGGGATGATGTAGAC +
Preference number: 3 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQRLEDC*TWDDVD
Trigger: GTCTACATCATCCCATGTCAAACAGTCTTCTAATCT...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATTTAAGGAATGCCGTCTaGAGGATTTTCTTCTATGGA +
Preference number: 3 (lower is better)
Translates to: FEDFWPLACTSKECLLKYLRNAV*RIFFYG
Trigger: TCCATAGAAGAAAATCCTCAAGACGGCATTCCTTAA...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCGTGCTTCATTTCAAATaGCCATTCTCGTGCTTTATA +
Preference number: 3 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIVLHFK*PFSCFI
Trigger: TATAAAGCACGAGAATGGCAATTTGAAATGAAGCAC...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTCTGGATTGAAGGTCTaGTTGGTCTTTATCTTGAGT +
Preference number: 3 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMSGLKV*LVFILS
Trigger: ACTCAAGATAAAGACCAACAAGACCTTCAATCCAGA...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTCTGGATTGAAGGTCTaGTTGGTCTTTATCTTGAGT +
Preference number: 3 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVSGLKV*LVFILS
Trigger: ACTCAAGATAAAGACCAACAAGACCTTCAATCCAGA...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTTGTGTAACTCTGGATaGAAGGTCTTGTTGGTCTTT +
Preference number: 3 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMLCNSG*KVLLVF
Trigger: AAAGACCAACAAGACCTTCAATCCAGAGTTACACAA...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGGTCAGAGTCTTCAGATaGCTGTTGATCTTTTGGATC +
Preference number: 3 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLVRVFR*LLIFWI
Trigger: GATCCAAAAGATCAACAGCAATCTGAAGACTCTGAC...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAAGGTTGTTCACTATTTaGAGTAACATCCGAAGGCAA +
Preference number: 3 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGARLFTI*SNIRRQ
Trigger: TTGCCTTCGGATGTTACTCAAAATAGTGAACAACCT...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527841.5
ENST00000530662.5
3UTR CCA 72 bp GTTTGCTTCTTTGAGTTTTGCTCCTTATCAGTCTGCTaGTCTTTAACTTGTCCATCTTTAGATTGTCCTTCT +
Preference number: 3 (lower is better)
Translates to: VCFFEFCSLSVC*SLTCPSLDCPS
Trigger: AGAAGGACAATCTAAAGATGGACAAGTTAAAGACCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR-3UTR CAA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCGTGCTTCATTTCAAATaGCCATTCTCGTGCTTTATA +
Preference number: 3 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSVLHFK*PFSCFI
Trigger: TATAAAGCACGAGAATGGCAATTTGAAATGAAGCAC...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGGTGCTTCATTTCAAATaGCCATTCTCGTGCTTTATA +
Preference number: 3 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVVLHFK*PFSCFI
Trigger: TATAAAGCACGAGAATGGCAATTTGAAATGAAGCAC...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTTGTGTAACTCTGGATaGAAGGTCTTGTTGGTCTTT +
Preference number: 3 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLLCNSG*KVLLVF
Trigger: AAAGACCAACAAGACCTTCAATCCAGAGTTACACAA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTGCTTCATTTCAAATaGCCATTCTCGTGCTTTATA +
Preference number: 3 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLVLHFK*PFSCFI
Trigger: TATAAAGCACGAGAATGGCAATTTGAAATGAAGCAC...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR-3UTR CAA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTGTGCTTCATTTCAAATaGCCATTCTCGTGCTTTATA +
Preference number: 3 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGVLHFK*PFSCFI
Trigger: TATAAAGCACGAGAATGGCAATTTGAAATGAAGCAC...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TGGGATGGAAAAACTTGGAGTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCTGGGAAGGTATGTCTTaGGGTGGCATGGCGTGGGAT +
Preference number: 4 (lower is better)
Translates to: WDGKTWSDAAWSCRSLVCWEGMS*GGMAWD
Trigger: ATCCCACGCCATGCCACCTCAAGACATACCTTCCCA...GCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTGGTCCTGTGTGCTGTaGCTGGGGATCAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGWSCVL*LGISSP
Trigger: AGGTGAGCTGATCCCCAGCCACAGCACACAGGACCA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531787.5
3UTR CAA 72 bp GTTTCTCCAGCCCTGAGTTATCCAGTCAGGGGATTCTaGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VSPALSYPVRGF*AKRLTVLGCPA
Trigger: GGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAGGGCTGGAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGGCACTTTCTCCACCTaGGCTTGCTGTCCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSGTFST*ACCPSA
Trigger: AGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCC...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGAGAGCAAGCAGGATCTaGGTAGCCCCCAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: RLLIAGPLRFALYISCPLRASRI*VAPKTL
Trigger: AAGAGTCTTGGGGGCTACCCAGATCCTGCTTGCTCT...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGTGTCTTGAGGTGGCATaGCGTGGGATGGTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: RLLIAGPLRFALYISCPLCLEVA*RGMVCL
Trigger: AAGACACACCATCCCACGCCATGCCACCTCAAGACA...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGGAAGGTATGTCTTGAGGTGGCATGGCGTGGGATGGTGTGTCTTGAGATAGCAAGGGATTATAGGAAGTaGCTGGAGTGTGGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: GKVCLEVAWRGMVCLEIARDYRK*LECGGV
Trigger: CACTCCTCCACACTCCAGCCACTTCCTATAATCCCT...TGCTATCTCAAGACACACCATCCCACGCCATGCCACCTCAAGACATACCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTGCTGGAACCTCCCACTaGCTGTTCCTGCCAGAACGA +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELAGTSH*LFLPER
Trigger: TCGTTCTGGCAGGAACAGCCAGTGGGAGGTTCCAGC...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531787.5
CDS-3UTR TCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTGGGAAGGTATGTCTTaGGGTGGCATGGCGTGGGAT +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSWEGMS*GGMAWD
Trigger: ATCCCACGCCATGCCACCTCAAGACATACCTTCCCA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGGGAAGGTATGTCTTaGGGTGGCATGGCGTGGGAT +
Preference number: 4 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLIWEGMS*GGMAWD
Trigger: ATCCCACGCCATGCCACCTCAAGACATACCTTCCCA...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTGGGAAGGTATGTCTTaGGGTGGCATGGCGTGGGAT +
Preference number: 4 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAWEGMS*GGMAWD
Trigger: ATCCCACGCCATGCCACCTCAAGACATACCTTCCCA...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTAGTGATGACGTGAGTTaGCCTTCTGTCCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: QGILGQKIDSPGLSSLEISDDVS*PSVLGC
Trigger: ACATCCCAGGACAGAAGGGCAACTCACGTCATCACT...AATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp TGGGATGGAAAAACTTGGAGTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCGTCCAGCCTGGAGATTaGCTTTGTGGAATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: WDGKTWSDAAWSCRSLVCVQPGD*LCGIAR
Trigger: TCTGGCAATTCCACAAAGGCAATCTCCAGGCTGGAC...GCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGAGCCCCCAAGACTCTTaGCTCTCCCTTCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: RLLIAGPLRFALYISCPLSPQDS*LSLQKI
Trigger: GATTTTCTGAAGGGAGAGCCAAGAGTCTTGGGGGCT...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp TGGGATGGAAAAACTTGGAGTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCAGCCCCCAAGACTCTTaGCTCTCCCTTCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: WDGKTWSDAAWSCRSLVCSPQDS*LSLQKI
Trigger: GATTTTCTGAAGGGAGAGCCAAGAGTCTTGGGGGCT...GCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGTGGAGTGACGCAGCTTaGTCCTGCAGAAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRWSDAA*SCRSLV
Trigger: AACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCA...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR CAA 72 bp CTGAGCTTGCTGTCCTTCGGCTTGAACATTTTGGAATaGTCCTTTCGGGGATTTCTTCTCTTGGGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LSLLSFGLNILE*SFRGFLLLGRL
Trigger: CAGCCGGCCCAAGAGAAGAAATCCCCGAAAGGACAATTCCAAAATGTTCAAGCCGAAGGACAGCAAGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 72 bp CAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTaGTCCAGCCTGGAGATTGCCTTTGTGGAATTGCCA +
Preference number: 4 (lower is better)
Translates to: QGILGQKIDSPG*SSLEIAFVELP
Trigger: TGGCAATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 72 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATaGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCT +
Preference number: 4 (lower is better)
Translates to: LSYPVRGFLAKR*TVLGCPAWRLP
Trigger: AGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGTGGGAAGGTATGTCTTaGGGTGGCATGGCGTGGGAT +
Preference number: 4 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIEWEGMS*GGMAWD
Trigger: ATCCCACGCCATGCCACCTCAAGACATACCTTCCCA...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGCTTGCTGATCTTCAGCTTGCTGATCTGGGAGTTGCTCTTTAGTTTGATTAAGGGCACTTTCTCCACCTaGGCTTGCTGTCCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: GLLIFSLLIWELLFSLIKGTFST*ACCPSA
Trigger: AGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCC...CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTGGTGGCAACCACAGTTaGGAACACAGATTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAGGNHS*EHRLEE
Trigger: CTCCTCCAATCTGTGTTCTCAACTGTGGTTGCCACC...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GATGATGGTAGTGCAGTGACCAAATGGAGTTGCTTCTTTTGCCGTGAAGGGAGCAGTGATGACGTGAGTTaGCCTTCTGTCCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: DDGSAVTKWSCFFCREGSSDDVS*PSVLGC
Trigger: ACATCCCAGGACAGAAGGGCAACTCACGTCATCACT...GCTCCCTTCACGGCAAAAGAAGCAACTCCATTTGGTCACTGCACTACCATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS-3UTR GCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTGCTTATCTACGGAGTaGCTCTTTGGGGATAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGCLSTE*LFGDSQ
Trigger: CTGGCTATCCCCAAAGAGGCACTCCGTAGATAAGCA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTTGTTGGGCTGTTGCGTaGTGGGTTTGGACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLCWAVA*WVWTSW
Trigger: CCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACA...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GATGATGGTAGTGCAGTGACCAAATGGAGTTGCTTCTTTTGCCGTGAAGGGAGCAGCCCCCAAGACTCTTaGCTCTCCCTTCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: DDGSAVTKWSCFFCREGSSPQDS*LSLQKI
Trigger: GATTTTCTGAAGGGAGAGCCAAGAGTCTTGGGGGCT...GCTCCCTTCACGGCAAAAGAAGCAACTCCATTTGGTCACTGCACTACCATCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS-3UTR CCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTGGAGTGACGCAGCTTaGTCCTGCAGAAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAWSDAA*SCRSLV
Trigger: AACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCA...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCTGGAGTGACGCAGCTTaGTCCTGCAGAAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSWSDAA*SCRSLV
Trigger: AACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCA...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGGGATGGAAAAACTTGGAGTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCTCTACTGGTAGAGCTTaGGATGGCAAGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: WDGKTWSDAAWSCRSLVCSTGRA*DGKSSG
Trigger: ACCTGAAGACTTGCCATCCCAAGCTCTACCAGTAGA...GCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTGTCTTGAGGTGGCATaGCGTGGGATGGTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELCLEVA*RGMVCL
Trigger: AAGACACACCATCCCACGCCATGCCACCTCAAGACA...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTTGTCTTGAGGTGGCATaGCGTGGGATGGTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCCLEVA*RGMVCL
Trigger: AAGACACACCATCCCACGCCATGCCACCTCAAGACA...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTAGGTATGTCTTGAGGTaGCATGGCGTGGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: SRLCWAVACWVWTSWYRARYVLR*HGVGWC
Trigger: ACACCATCCCACGCCATGCCACCTCAAGACATACCT...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGCTCTTTGAGGATTTCTaGCCTTTGGCTTGCACGTCT +
Preference number: 4 (lower is better)
Translates to: RLLIAGPLRFALYISCPLLFEDF*PLACTS
Trigger: AGACGTGCAAGCCAAAGGCCAGAAATCCTCAAAGAG...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTCTCTTTGAGGATTTCTaGCCTTTGGCTTGCACGTCT +
Preference number: 4 (lower is better)
Translates to: QGILGQKIDSPGLSSLEILFEDF*PLACTS
Trigger: AGACGTGCAAGCCAAAGGCCAGAAATCCTCAAAGAG...AATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp GGGAAGGTATGTCTTGAGGTGGCATGGCGTGGGATGGTGTGTCTTGAGATAGCAGGTATTGTTCCCCTTTaGCTTGCTGATCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GKVCLEVAWRGMVCLEIAGIVPL*LADLQL
Trigger: AAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACC...TGCTATCTCAAGACACACCATCCCACGCCATGCCACCTCAAGACATACCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGGGCTGTTGCGTGCTaGGTTTGGACTTCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISWAVAC*VWTSWY
Trigger: ATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTGGATCAGCTCACCTCTaGGGAGCGCTCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPGSAHL*GALSWN
Trigger: GTTCCAGCTGAGCGCTCCCCAGAGGTGAGCTGATCC...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531787.5
3UTR CAA 72 bp CTCCACCTGAGCTTGCTGTCCTTCGGCTTGAACATTTaGGAATTGTCCTTTCGGGGATTTCTTCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LHLSLLSFGLNI*ELSFRGFLLLG
Trigger: GCCCAAGAGAAGAAATCCCCGAAAGGACAATTCCAAAATGTTCAAGCCGAAGGACAGCAAGCTCAGGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATCTGTCCTGGGATGTTaGCTCCATGATTCTATGGCA +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISSVLGC*LHDSMA
Trigger: TGCCATAGAATCATGGAGTCAACATCCCAGGACAGA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp TGGGATGGAAAAACTTGGAGTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCTTCCAAAGCCCACAATaGTTAGAGCAAGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: WDGKTWSDAAWSCRSLVCFQSPQ*LEQAGS
Trigger: AGATCCTGCTTGCTCTAATCATTGTGGGCTTTGGAA...GCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGAGAATGGATATCCTGTaGGGACAACAAGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRRMDIL*GQQGEV
Trigger: GACTTCCCCTTGTTGTCCTCACAGGATATCCATTCT...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGTGGTCTTCAGTTTGCTaGTCCTGGGTTTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: RLLIAGPLRFALYISCPLWSSVC*SWVCFF
Trigger: AAAGAAGCAAACCCAGGATCAGCAAACTGAAGACCA...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTGGCACTTTCTCCACCTaGGCTTGCTGTCCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPGTFST*ACCPSA
Trigger: AGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCC...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTCTTGGCCAAAAGATTaGCAGTCCTGGGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSSWPKD*QSWVVQ
Trigger: CTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTTGTTTCTCCAGCCCTaGGTTATCCAGTCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLILFLQP*VIQSGD
Trigger: ATCCCCTGACTGGATAACTCAGGGCTGGAGAAACAA...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGGGTGGCAACCACAGTTaGGAACACAGATTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIEGGNHS*EHRLEE
Trigger: CTCCTCCAATCTGTGTTCTCAACTGTGGTTGCCACC...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTGACGCAGCTTGGTCCTaGAGAAGCTTGGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELDAAWS*RSLVCI
Trigger: AATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTC...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTGACGCAGCTTGGTCCTaGAGAAGCTTGGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: SRLCWAVACWVWTSWYRADAAWS*RSLVCI
Trigger: AATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTC...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTGTCTTGGGATAGTATaGCTTGAGGGGGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSCLGIV*LEGAGH
Trigger: ATGACCTGCCCCCTCAAGGCATACTATCCCAAGACA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTTGTCTTGGGATAGTATaGCTTGAGGGGGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLCLGIV*LEGAGH
Trigger: ATGACCTGCCCCCTCAAGGCATACTATCCCAAGACA...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTTTCTGGCCTTTGGCTTaGACGTCTAAAGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: QGILGQKIDSPGLSSLEIFWPLA*TSKECL
Trigger: GAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAA...AATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTGCTTATCTACGGAGTaGCTCTTTGGGGATAGCCAG +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSCLSTE*LFGDSQ
Trigger: CTGGCTATCCCCAAAGAGGCACTCCGTAGATAAGCA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGCTTATCTACGGAGTaGCTCTTTGGGGATAGCCAG +
Preference number: 4 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLICLSTE*LFGDSQ
Trigger: CTGGCTATCCCCAAAGAGGCACTCCGTAGATAAGCA...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCGTCCAGCCTGGAGATTaGCTTTGTGGAATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLIVQPGD*LCGIAR
Trigger: TCTGGCAATTCCACAAAGGCAATCTCCAGGCTGGAC...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGTGTTGGGCTGTTGCGTaGTGGGTTTGGACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIECWAVA*WVWTSW
Trigger: CCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACA...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGATGTTGGGCTGTTGCGTaGTGGGTTTGGACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRCWAVA*WVWTSW
Trigger: CCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACA...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCAAGGTCCCCTGAGGTTTaGCCTATACATTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISRSPEV*PIHFMS
Trigger: GGACATGAAATGTATAGGGCAAACCTCAGGGGACCT...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTGTTGCCCTTCTGTCCTaGGATGTTGACTCCATGATT +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGVALLS*DVDSMI
Trigger: AATCATGGAGTCAACATCCCAGGACAGAAGGGCAAC...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCAGTTGCCCTTCTGTCCTaGGATGTTGACTCCATGATT +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISVALLS*DVDSMI
Trigger: AATCATGGAGTCAACATCCCAGGACAGAAGGGCAAC...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGTTGCCCTTCTGTCCTaGGATGTTGACTCCATGATT +
Preference number: 4 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRVALLS*DVDSMI
Trigger: AATCATGGAGTCAACATCCCAGGACAGAAGGGCAAC...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTAGCCCCCAAGACTCTTaGCTCTCCCTTCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSSPQDS*LSLQKI
Trigger: GATTTTCTGAAGGGAGAGCCAAGAGTCTTGGGGGCT...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAAGAGCAAGCAGGATCTaGGTAGCCCCCAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRRASRI*VAPKTL
Trigger: AAGAGTCTTGGGGGCTACCCAGATCCTGCTTGCTCT...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp AGATTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGTGGGATGGAAAAACTTaGAGTGACGCAGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: RLSFWVLFPFGLLIFSLLWDGKT*SDAAWS
Trigger: GGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA...CAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTCTACTGGTAGAGCTTaGGATGGCAAGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGSTGRA*DGKSSG
Trigger: ACCTGAAGACTTGCCATCCCAAGCTCTACCAGTAGA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATCTACTGGTAGAGCTTaGGATGGCAAGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISSTGRA*DGKSSG
Trigger: ACCTGAAGACTTGCCATCCCAAGCTCTACCAGTAGA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGGAAGGTATGTCTTGAGGTGGCATGGCGTGGGATGGTGTGTCTTGAGATAGCAAGGATTTCTGGCCTTTaGCTTGCACGTCTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: GKVCLEVAWRGMVCLEIARISGL*LARLKN
Trigger: ATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCT...TGCTATCTCAAGACACACCATCCCACGCCATGCCACCTCAAGACATACCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTCTCTTTGAGGATTTCTaGCCTTTGGCTTGCACGTCT +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGLFEDF*PLACTS
Trigger: AGACGTGCAAGCCAAAGGCCAGAAATCCTCAAAGAG...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCACTCTTTGAGGATTTCTaGCCTTTGGCTTGCACGTCT +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISLFEDF*PLACTS
Trigger: AGACGTGCAAGCCAAAGGCCAGAAATCCTCAAAGAG...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTCTGGGTTGTCCAGCCTaGAGATTGCCTTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELLGCPA*RLPLWN
Trigger: ATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAG...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCTGGGTTGTCCAGCCTaGAGATTGCCTTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSLGCPA*RLPLWN
Trigger: ATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAG...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCTGGGCTGTTGCGTGCTaGGTTTGGACTTCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSWAVAC*VWTSWY
Trigger: ATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTGGGATGTTGACTCCATaGTTCTATGGCAGAACTCTA +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGGMLTP*FYGRTL
Trigger: TAGAGTTCTGCCATAGAATCATGGAGTCAACATCCC...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCAGGGATGTTGACTCCATaGTTCTATGGCAGAACTCTA +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISGMLTP*FYGRTL
Trigger: TAGAGTTCTGCCATAGAATCATGGAGTCAACATCCC...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTTCTGTCCTGGGATGTTaGCTCCATGATTCTATGGCA +
Preference number: 4 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCSVLGC*LHDSMA
Trigger: TGCCATAGAATCATGGAGTCAACATCCCAGGACAGA...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTTTTATAGTGATGACGTaGGTTGCCCTTCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLFIVMT*VALLSW
Trigger: CCAGGACAGAAGGGCAACTCACGTCATCACTATAAA...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGTTCCAAAGCCCACAATaGTTAGAGCAAGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRFQSPQ*LEQAGS
Trigger: AGATCCTGCTTGCTCTAATCATTGTGGGCTTTGGAA...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp GATGATGGTAGTGCAGTGACCAAATGGAGTTGCTTCTTTTGCCGTGAAGGGAGCTTCCAAAGCCCACAATaGTTAGAGCAAGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: DDGSAVTKWSCFFCREGSFQSPQ*LEQAGS
Trigger: AGATCCTGCTTGCTCTAATCATTGTGGGCTTTGGAA...GCTCCCTTCACGGCAAAAGAAGCAACTCCATTTGGTCACTGCACTACCATCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS-3UTR TCA 90 bp AGATTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGAGAATGGATATCCTGTaGGGACAACAAGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: RLSFWVLFPFGLLIFSLLRMDIL*GQQGEV
Trigger: GACTTCCCCTTGTTGTCCTCACAGGATATCCATTCT...CAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCAGATCTGGGGGCTGCTaGAGTAGGTGTTGTATTTCA +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSRSGGC*SRCCIS
Trigger: TGAAATACAACACCTACTTCAGCAGCCCCCAGATCT...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp ATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTAGATCTGGGGGCTGCTaGAGTAGGTGTTGTATTTCA +
Preference number: 4 (lower is better)
Translates to: ILGQKIDSPGLSSLEIAFRSGGC*SRCCIS
Trigger: TGAAATACAACACCTACTTCAGCAGCCCCCAGATCT...AAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTAGATCTGGGGGCTGCTaGAGTAGGTGTTGTATTTCA +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSRSGGC*SRCCIS
Trigger: TGAAATACAACACCTACTTCAGCAGCCCCCAGATCT...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTGTGGAATTGAGATCTGGGGGCTGCTaGAGTAGGTGTTGTATTTCA +
Preference number: 4 (lower is better)
Translates to: QKIDSPGLSSLEIAFVELRSGGC*SRCCIS
Trigger: TGAAATACAACACCTACTTCAGCAGCCCCCAGATCT...CAATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTGGTCTTCAGTTTGCTaGTCCTGGGTTTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGWSSVC*SWVCFF
Trigger: AAAGAAGCAAACCCAGGATCAGCAAACTGAAGACCA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGGGCACTTTCTCCACCTaGGCTTGCTGTCCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWGTFST*ACCPSA
Trigger: AGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCC...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTGGCACTTTCTCCACCTaGGCTTGCTGTCCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIGTFST*ACCPSA
Trigger: AGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCC...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGTGGCCAGAAGAAGAATaGAAATCTGCCTTCACGTCT +
Preference number: 4 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRWPEEE*KSAFTS
Trigger: AGACGTGAAGGCAGATTTTCATTCTTCTTCTGGCCA...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CTAGCTGAATGGACATATTTTCTGAGGGCTTTTTCTCTAGTGTGGGAGGCAAAGGGTGGCAACCACAGTTaGGAACACAGATTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LAEWTYFLRAFSLVWEAKGGNHS*EHRLEE
Trigger: CTCCTCCAATCTGTGTTCTCAACTGTGGTTGCCACC...CTTTGCCTCCCACACTAGAGAAAAAGCCCTCAGAAAATATGTCCATTCAGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATCAGGTAATATGGCATaGGCTGATAGAGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISSGNMA*ADRAWD
Trigger: ATCCCAAGCTCTATCAGCGCATGCCATATTACCTGA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGTCAGGTAATATGGCATaGGCTGATAGAGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRSGNMA*ADRAWD
Trigger: ATCCCAAGCTCTATCAGCGCATGCCATATTACCTGA...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTTGTCTCCTTAAGTATTaGAAGGCTTTGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: QGILGQKIDSPGLSSLEICLLKY*KALVCW
Trigger: CCAGCAAACCAAAGCCTTGCAATACTTAAGGAGACA...AATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGTGTCTCCTTAAGTATTaGAAGGCTTTGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RLLIAGPLRFALYISCPLCLLKY*KALVCW
Trigger: CCAGCAAACCAAAGCCTTGCAATACTTAAGGAGACA...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGTTCTGGCCTTTGGCTTaGACGTCTAAAGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRFWPLA*TSKECL
Trigger: GAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAA...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGGTCTAAGGATTTCTaGTTTGGAGATTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISWSKDF*FGDCQP
Trigger: AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGTTATGTTGGGCTGTTaGGTGCTGGGTTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRVMLGC*VLGLDF
Trigger: GAAGTCCAAACCCAGCACGCAACAGCCCAACATAAC...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGGTTATGTTGGGCTGTTaGGTGCTGGGTTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIEVMLGC*VLGLDF
Trigger: GAAGTCCAAACCCAGCACGCAACAGCCCAACATAAC...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GTCTCCTGGAGGGCCATATTTATGGAATTCATTACCCTAGGACGTGAAGCAGTTTGGAGTTGCTTCTTTTaGCGTGAAGGGAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: VSWRAIFMEFITLGREAVWSCFF*REGSCL
Trigger: AAGGCAGCTCCCTTCACGGCAAAAGAAGCAACTCCA...AACTGCTTCACGTCCTAGGGTAATGAATTCCATAAATATGGCCCTCCAGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS-3UTR CCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTGTTGCCCTTCTGTCCTaGGATGTTGACTCCATGATT +
Preference number: 4 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAVALLS*DVDSMI
Trigger: AATCATGGAGTCAACATCCCAGGACAGAAGGGCAAC...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTGTTGCCCTTCTGTCCTaGGATGTTGACTCCATGATT +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELVALLS*DVDSMI
Trigger: AATCATGGAGTCAACATCCCAGGACAGAAGGGCAAC...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCGTTGCCCTTCTGTCCTaGGATGTTGACTCCATGATT +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSVALLS*DVDSMI
Trigger: AATCATGGAGTCAACATCCCAGGACAGAAGGGCAAC...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAAGCCCCCAAGACTCTTaGCTCTCCCTTCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRSPQDS*LSLQKI
Trigger: GATTTTCTGAAGGGAGAGCCAAGAGTCTTGGGGGCT...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTAAGTGCTCCCCAGAATaGATATCCTGTGAGGACAAC +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELKCSPE*ISCEDN
Trigger: GTTGTCCTCACAGGATATCCATTCTGGGGAGCACTT...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp TGGGATGGAAAAACTTGGAGTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCCCTTTATTACCTGGTTaGGAGACTAAAGGACTCCTA +
Preference number: 4 (lower is better)
Translates to: WDGKTWSDAAWSCRSLVCPLLPG*ETKGLL
Trigger: TAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGG...GCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCAGGTCCTGCAGAAGCTTaGTTTGCATTTGAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISGPAEA*FAFEKV
Trigger: AACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACC...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCTGGAGTGACGCAGCTTaGTCCTGCAGAAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFWSDAA*SCRSLV
Trigger: AACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCA...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTCTACTGGTAGAGCTTaGGATGGCAAGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SRLCWAVACWVWTSWYRASTGRA*DGKSSG
Trigger: ACCTGAAGACTTGCCATCCCAAGCTCTACCAGTAGA...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGCGCTGATAGAGCTTaGGATAGCATATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISCADRA*DSISWE
Trigger: TTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp ATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTGGGAACTGCACAATATaGGATGTTGAGGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ILGQKIDSPGLSSLEIAFGNCTI*DVEASG
Trigger: ACCTGAAGCCTCAACATCCCATATTGTGCAGTTCCC...AAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp GTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCATTTGAGAAGGTTGTACAAGGGAACTGCACAATATaGGATGTTGAGGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VTQLGPAEAWFAFEKVVQGNCTI*DVEASG
Trigger: ACCTGAAGCCTCAACATCCCATATTGTGCAGTTCCC...TTGTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTAGGTTCAGTGTTTTCTaGTTGAAGATCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLRFSVF*LKIWGL
Trigger: CAGCCCCCAGATCTTCAACCAGAAAACACTGAACCT...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTGTGGAATTGAGGTTCAGTGTTTTCTaGTTGAAGATCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QKIDSPGLSSLEIAFVELRFSVF*LKIWGL
Trigger: CAGCCCCCAGATCTTCAACCAGAAAACACTGAACCT...CAATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTCTCTTTGAGGATTTCTaGCCTTTGGCTTGCACGTCT +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLLFEDF*PLACTS
Trigger: AGACGTGCAAGCCAAAGGCCAGAAATCCTCAAAGAG...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGTTCAGCTTGCTGATCTaGGAGTTGCTCTTTAGTTTG +
Preference number: 4 (lower is better)
Translates to: RLLIAGPLRFALYISCPLFSLLI*ELLFSL
Trigger: CAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAA...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGGAAGGTATGTCTTGAGGTGGCATGGCGTGGGATGGTGTGTCTTGAGATAGCATGGAGATTGCCTTTGTaGAATTGCCAGAATTGGTAT +
Preference number: 4 (lower is better)
Translates to: GKVCLEVAWRGMVCLEIAWRLPL*NCQNWY
Trigger: ATACCAATTCTGGCAATTCCACAAAGGCAATCTCCA...TGCTATCTCAAGACACACCATCCCACGCCATGCCACCTCAAGACATACCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp GCTGATCCTGGGTTTGCTTCTTTGAGTTTTGCTCCTTATCAGTCTGCTGGTCTTCTGGGTTGTCCAGCCTaGAGATTGCCTTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: ADPGFASLSFAPYQSAGLLGCPA*RLPLWN
Trigger: ATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAG...AAGACCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAGGATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCGTTGCGTGCTGGGTTTaGACTTCTTGGTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLIVACWV*TSWYRA
Trigger: AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAAC...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp ATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTGTTGCGTGCTGGGTTTaGACTTCTTGGTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: ILGQKIDSPGLSSLEIAFVACWV*TSWYRA
Trigger: AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAAC...AAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp AGCCAGTCTTTGATTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTTGGGCTGTTGCGTGCTaGGTTTGGACTTCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: SQSLICWSKDFCFGDCQPWAVAC*VWTSWY
Trigger: ATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA...AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCATTCTAGGTTATGTTaGGCTGTTGCGTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSHSRLC*AVACWV
Trigger: AACCCAGCACGCAACAGCCCAACATAACCTAGAATG...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp ATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTCATTCTAGGTTATGTTaGGCTGTTGCGTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: ILGQKIDSPGLSSLEIAFHSRLC*AVACWV
Trigger: AACCCAGCACGCAACAGCCCAACATAACCTAGAATG...AAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTCATTCTAGGTTATGTTaGGCTGTTGCGTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLHSRLC*AVACWV
Trigger: AACCCAGCACGCAACAGCCCAACATAACCTAGAATG...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTTAATGGGGGCAGTGTaGTATTGGGTAGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGLMGAV*YWVDSA
Trigger: TGCAGAATCTACCCAATACCACACTGCCCCCATTAA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGGGGAGCGCTCAGCTaGAACCTCCCACTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMWGALS*NLPLAV
Trigger: AACAGCCAGTGGGAGGTTCCAGCTGAGCGCTCCCCA...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531787.5
CDS-3UTR TCA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGTGGAGCCCTCAGAGATaGGCCCTTAGTGATGACTCT +
Preference number: 4 (lower is better)
Translates to: GLVGLYLECLDILGYVGLWSPQR*ALSDDS
Trigger: AGAGTCATCACTAAGGGCTCATCTCTGAGGGCTCCA...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
CDS-3UTR TCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTGGGATGTTGACTCCATaGTTCTATGGCAGAACTCTA +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELGMLTP*FYGRTL
Trigger: TAGAGTTCTGCCATAGAATCATGGAGTCAACATCCC...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp GTCTCCTGGAGGGCCATATTTATGGAATTCATTACCCTAGGACGTGAAGCAGTTTCTGTCCTGGGATGTTaGCTCCATGATTCTATGGCA +
Preference number: 4 (lower is better)
Translates to: VSWRAIFMEFITLGREAVSVLGC*LHDSMA
Trigger: TGCCATAGAATCATGGAGTCAACATCCCAGGACAGA...AACTGCTTCACGTCCTAGGGTAATGAATTCCATAAATATGGCCCTCCAGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS-3UTR TCA 90 bp GTCTCCTGGAGGGCCATATTTATGGAATTCATTACCCTAGGACGTGAAGCAGTTTTTATAGTGATGACGTaGGTTGCCCTTCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VSWRAIFMEFITLGREAVFIVMT*VALLSW
Trigger: CCAGGACAGAAGGGCAACTCACGTCATCACTATAAA...AACTGCTTCACGTCCTAGGGTAATGAATTCCATAAATATGGCCCTCCAGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS-3UTR TCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTTTCCAAAGCCCACAATaGTTAGAGCAAGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLFQSPQ*LEQAGS
Trigger: AGATCCTGCTTGCTCTAATCATTGTGGGCTTTGGAA...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAAGAATGGATATCCTGTaGGGACAACAAGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRRMDIL*GQQGEV
Trigger: GACTTCCCCTTGTTGTCCTCACAGGATATCCATTCT...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGAGAATGGATATCCTGTaGGGACAACAAGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIERMDIL*GQQGEV
Trigger: GACTTCCCCTTGTTGTCCTCACAGGATATCCATTCT...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp TTGGTCTCCTGGAGGGCCATATTTATGGAATTCATTACCCTAGGACGTGAAGCAAGAATGGATATCCTGTaGGGACAACAAGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LVSWRAIFMEFITLGREARMDIL*GQQGEV
Trigger: GACTTCCCCTTGTTGTCCTCACAGGATATCCATTCT...TGCTTCACGTCCTAGGGTAATGAATTCCATAAATATGGCCCTCCAGGAGACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS-3UTR TCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTGGGATGGTGTGTCTTaGGATAGCATATCTAGGGAT +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELWDGVS*DSISRD
Trigger: ATCCCTAGATATGCTATCTCAAGACACACCATCCCA...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTGGGATGGTGTGTCTTaGGATAGCATATCTAGGGAT +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSWDGVS*DSISRD
Trigger: ATCCCTAGATATGCTATCTCAAGACACACCATCCCA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCTGGGAAGGTATGTCTTaGGGTGGCATGGCGTGGGAT +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIWEGMS*GGMAWD
Trigger: ATCCCACGCCATGCCACCTCAAGACATACCTTCCCA...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTGGGATAGCCAGTCTTTaGTTTGCTGGTCTAAGGATT +
Preference number: 4 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAGIASL*FAGLRI
Trigger: AATCCTTAGACCAGCAAATCAAAGACTGGCTATCCC...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGGGATAGCCAGTCTTTaGTTTGCTGGTCTAAGGATT +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSGIASL*FAGLRI
Trigger: AATCCTTAGACCAGCAAATCAAAGACTGGCTATCCC...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTGGTCTTCAGTTTGCTaGTCCTGGGTTTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSWSSVC*SWVCFF
Trigger: AAAGAAGCAAACCCAGGATCAGCAAACTGAAGACCA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGGTCTTCAGTTTGCTaGTCCTGGGTTTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLIWSSVC*SWVCFF
Trigger: AAAGAAGCAAACCCAGGATCAGCAAACTGAAGACCA...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTGCTGTCCTTCGGCTTaGACATTTTGGAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSCCPSA*TFWNCP
Trigger: AGGACAATTCCAAAATGTTCAAGCCGAAGGACAGCA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTGCTGTCCTTCGGCTTaGACATTTTGGAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: SRLCWAVACWVWTSWYRACCPSA*TFWNCP
Trigger: AGGACAATTCCAAAATGTTCAAGCCGAAGGACAGCA...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGGGCACTTTCTCCACCTaGGCTTGCTGTCCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVGTFST*ACCPSA
Trigger: AGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCC...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAGGCACTTTCTCCACCTaGGCTTGCTGTCCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTGTFST*ACCPSA
Trigger: AGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCC...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TCATGTCATGAAACAGCATATCTTGAGATGATGTGTCTTGGGATAGTATGCCTTGGCACTTTCTCCACCTaGGCTTGCTGTCCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: SCHETAYLEMMCLGIVCLGTFST*ACCPSA
Trigger: AGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCC...AAGGCATACTATCCCAAGACACATCATCTCAAGATATGCTGTTTCATGACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCTCTTGGCCAAAAGATTaGCAGTCCTGGGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFSWPKD*QSWVVQ
Trigger: CTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGA...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGTGTGTAACTCTGGATTaGAGGTCTTGTTGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: RLLIAGPLRFALYISCPLCVTLD*RSCWSL
Trigger: TAAAGACCAACAAGACCTTCAATCCAGAGTTACACA...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTTGGCCAGAAGAAGAATaGAAATCTGCCTTCACGTCT +
Preference number: 4 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCWPEEE*KSAFTS
Trigger: AGACGTGAAGGCAGATTTTCATTCTTCTTCTGGCCA...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTGGCCAGAAGAAGAATaGAAATCTGCCTTCACGTCT +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSWPEEE*KSAFTS
Trigger: AGACGTGAAGGCAGATTTTCATTCTTCTTCTGGCCA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTACATGTGTCTTGTACTaGGCTTTGGCCAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELTCVLY*ALARRR
Trigger: TCTTCTTCTGGCCAAAGCTCAGTACAAGACACATGT...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGGGTGGCAACCACAGTTaGGAACACAGATTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKGGNHS*EHRLEE
Trigger: CTCCTCCAATCTGTGTTCTCAACTGTGGTTGCCACC...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTGGGGCAAACTCAACTTaGCCTGTCTCCAAAATCTAT +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLGANST*PVSKIY
Trigger: ATAGATTTTGGAGACAGGTCAAGTTGAGTTTGCCCC...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395001.5
CDS-3UTR TCA 90 bp GGTAATATGGCATGCGCTGATAGAGCTTGGGATAGCATATCTTGGGAAGGTATGAAACAGAACCTCATCTaGCTGTGTCCAGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: GNMACADRAWDSISWEGMKQNLI*LCPALA
Trigger: AGCAAGTGCTGGACACAGTCAGATGAGGTTCTGTTT...CATACCTTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530662.5
CDS-3UTR GCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCAGTGATGACGTGAGTTaGCCTTCTGTCCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFSDDVS*PSVLGC
Trigger: ACATCCCAGGACAGAAGGGCAACTCACGTCATCACT...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp GCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAATATGGGATGTTGAGGCTTGACGCAGCTTGGTCCTaGAGAAGCTTGGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: AEVGVVFQGTAQYGMLRLDAAWS*RSLVCI
Trigger: AATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTC...AAGCCTCAACATCCCATATTGTGCAGTTCCCTGAAATACAACACCTACTTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCGACGCAGCTTGGTCCTaGAGAAGCTTGGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFDAAWS*RSLVCI
Trigger: AATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTC...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGAGCATATCTAGGGATTaGATATCTTGGGATGTCATG +
Preference number: 4 (lower is better)
Translates to: RLLIAGPLRFALYISCPLSISRD*ISWDVM
Trigger: CATGACATCCCAAGATATGCAATCCCTAGATATGCT...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTTCAGGTAATATGGCATaGGCTGATAGAGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLSGNMA*ADRAWD
Trigger: ATCCCAAGCTCTATCAGCGCATGCCATATTACCTGA...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCAGGTAATATGGCATaGGCTGATAGAGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELSGNMA*ADRAWD
Trigger: ATCCCAAGCTCTATCAGCGCATGCCATATTACCTGA...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGTGCTGGTTTAAGGAATaGCGTCTTGAGGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: RLLIAGPLRFALYISCPLCWFKE*RLEDFL
Trigger: AAGAAAATCCTCAAGACGGCATTCCTTAAACCAGCA...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTTTCTGGCCTTTGGCTTaGACGTCTAAAGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLFWPLA*TSKECL
Trigger: GAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAA...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGTGCTCCTTATCAGTCTaGTGGTCTTTAACTTGTCCA +
Preference number: 4 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRCSLSV*WSLTCP
Trigger: TGGACAAGTTAAAGACCAGCAGACTGATAAGGAGCA...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGCTCCTTATCAGTCTaGTGGTCTTTAACTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISCSLSV*WSLTCP
Trigger: TGGACAAGTTAAAGACCAGCAGACTGATAAGGAGCA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGGAAGGTATGTCTTGAGGTGGCATGGCGTGGGATGGTGTGTCTTGAGATAGCATGCCAGAATTGGTATTaGTGTATTTGGGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: GKVCLEVAWRGMVCLEIACQNWY*CIWDSE
Trigger: TTCAGAATCCCAAATACAGCAATACCAATTCTGGCA...TGCTATCTCAAGACACACCATCCCACGCCATGCCACCTCAAGACATACCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp GGCTTGCTGATCTTCAGCTTGCTGATCTGGGAGTTGCTCTTTAGTTTGATTAAGGTCCAGCCTGGAGATTaGCTTTGTGGAATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GLLIFSLLIWELLFSLIKVQPGD*LCGIAR
Trigger: TCTGGCAATTCCACAAAGGCAATCTCCAGGCTGGAC...CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGTGGTATAGAGCTTTCTaGTTTAGGGCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RLLIAGPLRFALYISCPLWYRAF*FRASFS
Trigger: AGAGAAAGAAGCCCTAAAGCAGAAAGCTCTATACCA...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTACCTTTATTACCTGGTTGGGAGACTAAAGGACTCCTAGAGAGTGTTAACTTGTGTTGGGCTGTTGCGTaGTGGGTTTGGACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LPLLPGWETKGLLESVNLCWAVA*WVWTSW
Trigger: CCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACA...CAAGTTAACACTCTCTAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAAGGTCCCCTGAGGTTTaGCCTATACATTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRRSPEV*PIHFMS
Trigger: GGACATGAAATGTATAGGGCAAACCTCAGGGGACCT...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTACCTTGACCAATAAGTaGTCCCCAGAATGGATATCC +
Preference number: 4 (lower is better)
Translates to: SRLCWAVACWVWTSWYRATLTNK*SPEWIS
Trigger: GGATATCCATTCTGGGGAGCACTTATTGGTCAAGGT...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp GTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCATTTGAGAAGGTTGTACAAACCTTGACCAATAAGTaGTCCCCAGAATGGATATCC +
Preference number: 4 (lower is better)
Translates to: VTQLGPAEAWFAFEKVVQTLTNK*SPEWIS
Trigger: GGATATCCATTCTGGGGAGCACTTATTGGTCAAGGT...TTGTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp TTGGTCTCCTGGAGGGCCATATTTATGGAATTCATTACCCTAGGACGTGAAGCAGTGACCAAATGGAGTTaGTTCTTTTGCCGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: LVSWRAIFMEFITLGREAVTKWS*FFCREG
Trigger: CCCTTCACGGCAAAAGAAGCAACTCCATTTGGTCAC...TGCTTCACGTCCTAGGGTAATGAATTCCATAAATATGGCCCTCCAGGAGACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS-3UTR CCA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGACTCCATGATTCTATaGCAGAACTCTAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRDSMIL*QNSSKG
Trigger: TCCCTTACTAGAGTTCTGCCATAGAATCATGGAGTC...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp GGCATAACAGTTTTGGCACTTTCTCCACCTGAGCTTGCTGTCCTTCGGCTTGAAGACTCCATGATTCTATaGCAGAACTCTAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: GITVLALSPPELAVLRLEDSMIL*QNSSKG
Trigger: TCCCTTACTAGAGTTCTGCCATAGAATCATGGAGTC...TTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCCAAAACTGTTATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TTGGTCTCCTGGAGGGCCATATTTATGGAATTCATTACCCTAGGACGTGAAGCAGTTGCCCTTCTGTCCTaGGATGTTGACTCCATGATT +
Preference number: 4 (lower is better)
Translates to: LVSWRAIFMEFITLGREAVALLS*DVDSMI
Trigger: AATCATGGAGTCAACATCCCAGGACAGAAGGGCAAC...TGCTTCACGTCCTAGGGTAATGAATTCCATAAATATGGCCCTCCAGGAGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS-3UTR CCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGAGAGCAAGCAGGATCTaGGTAGCCCCCAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKRASRI*VAPKTL
Trigger: AAGAGTCTTGGGGGCTACCCAGATCCTGCTTGCTCT...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp TACAATGATGATGGTAGTGCAGTGACCAAATGGAGTTGCTTCTTTTGCCGTGAAAGAGCAAGCAGGATCTaGGTAGCCCCCAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: YNDDGSAVTKWSCFFCRERASRI*VAPKTL
Trigger: AAGAGTCTTGGGGGCTACCCAGATCCTGCTTGCTCT...TTCACGGCAAAAGAAGCAACTCCATTTGGTCACTGCACTACCATCATCATTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS-3UTR CCA 90 bp GTCTCCTGGAGGGCCATATTTATGGAATTCATTACCCTAGGACGTGAAGCAGTTAAGTGCTCCCCAGAATaGATATCCTGTGAGGACAAC +
Preference number: 4 (lower is better)
Translates to: VSWRAIFMEFITLGREAVKCSPE*ISCEDN
Trigger: GTTGTCCTCACAGGATATCCATTCTGGGGAGCACTT...AACTGCTTCACGTCCTAGGGTAATGAATTCCATAAATATGGCCCTCCAGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS-3UTR CCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTCCTTTATTACCTGGTTaGGAGACTAAAGGACTCCTA +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGPLLPG*ETKGLL
Trigger: TAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGG...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCACCTTTATTACCTGGTTaGGAGACTAAAGGACTCCTA +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISPLLPG*ETKGLL
Trigger: TAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGG...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGGTCCTGCAGAAGCTTaGTTTGCATTTGAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSGPAEA*FAFEKV
Trigger: AACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACC...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTTGTCTTGAGGTGGCATaGCGTGGGATGGTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPCLEVA*RGMVCL
Trigger: AAGACACACCATCCCACGCCATGCCACCTCAAGACA...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGCGCTGATAGAGCTTaGGATAGCATATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLICADRA*DSISWE
Trigger: TTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCA...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCTGCGCTGATAGAGCTTaGGATAGCATATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSCADRA*DSISWE
Trigger: TTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCA...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTAGGCTTCAGGTAATATaGCATGCGCTGATAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSRLQVI*HALIEL
Trigger: AAGCTCTATCAGCGCATGCCATATTACCTGAAGCCT...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCAGGCTTCAGGTAATATaGCATGCGCTGATAGAGCTT +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSRLQVI*HALIEL
Trigger: AAGCTCTATCAGCGCATGCCATATTACCTGAAGCCT...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGAGGTTCAGTGTTTTCTaGTTGAAGATCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIERFSVF*LKIWGL
Trigger: CAGCCCCCAGATCTTCAACCAGAAAACACTGAACCT...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCAAAGGCTTTGGTTTGCTaGTTTAAGGAATGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISKALVC*FKECRL
Trigger: AAGACGGCATTCCTTAAACCAGCAAACCAAAGCCTT...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTAGGATTTCTGGCCTTTaGCTTGCACGTCTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGRISGL*LARLKN
Trigger: ATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCT...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCAAGGATTTCTGGCCTTTaGCTTGCACGTCTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISRISGL*LARLKN
Trigger: ATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCT...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGAGGATTTCTGGCCTTTaGCTTGCACGTCTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRRISGL*LARLKN
Trigger: ATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCT...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTTCAGCTTGCTGATCTaGGAGTTGCTCTTTAGTTTG +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGFSLLI*ELLFSL
Trigger: CAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTGGTATTGTTCCCCTTTaGCTTGCTGATCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELGIVPL*LADLQL
Trigger: AAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACC...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTGGTATTGTTCCCCTTTaGCTTGCTGATCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCGIVPL*LADLQL
Trigger: AAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACC...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTGGTATTGTTCCCCTTTaGCTTGCTGATCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLGIVPL*LADLQL
Trigger: AAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACC...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCTGGGCTGTTGCGTGCTaGGTTTGGACTTCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFWAVAC*VWTSWY
Trigger: ATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTTAATGGGGGCAGTGTaGTATTGGGTAGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELLMGAV*YWVDSA
Trigger: TGCAGAATCTACCCAATACCACACTGCCCCCATTAA...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCAGGGATTATAGGAAGTaGCTGGAGTGTGGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFRDYRK*LECGGV
Trigger: CACTCCTCCACACTCCAGCCACTTCCTATAATCCCT...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCCTGCCAGAACGATCTTaGTGCTCTGCTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWILPERS*CSALQP
Trigger: AGGCTGGAGAGCAGAGCACCAAGATCGTTCTGGCAG...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531787.5
3UTR CAA 72 bp GCTGTATTTGGGATTCTGAATCTTGGCATAACAGTTTaGGCACTTTCTCCACCTGAGCTTGCTGTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: AVFGILNLGITV*ALSPPELAVLR
Trigger: CCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCCAAAACTGTTATGCCAAGATTCAGAATCCCAAATACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTTGCCGCCCAAATCATaGTCTACCTCTCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFILPPKS*STSPPE
Trigger: CTCTGGTGGAGAGGTAGATCATGATTTGGGCGGCAA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp GTCTCCTGGAGGGCCATATTTATGGAATTCATTACCCTAGGACGTGAAGCAGTTGGGATGTTGACTCCATaGTTCTATGGCAGAACTCTA +
Preference number: 4 (lower is better)
Translates to: VSWRAIFMEFITLGREAVGMLTP*FYGRTL
Trigger: TAGAGTTCTGCCATAGAATCATGGAGTCAACATCCC...AACTGCTTCACGTCCTAGGGTAATGAATTCCATAAATATGGCCCTCCAGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS-3UTR TCA 90 bp GGCTTGCTGATCTTCAGCTTGCTGATCTGGGAGTTGCTCTTTAGTTTGATTAAGTTTATAGTGATGACGTaGGTTGCCCTTCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GLLIFSLLIWELLFSLIKFIVMT*VALLSW
Trigger: CCAGGACAGAAGGGCAACTCACGTCATCACTATAAA...CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCGGTTGTTCACTATTTTaGGTAACATCCGAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLIGCSLF*VTSEGK
Trigger: CTTGCCTTCGGATGTTACTCAAAATAGTGAACAACC...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp CAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTGTGGAATTGGGTTGTTCACTATTTTaGGTAACATCCGAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: QKIDSPGLSSLEIAFVELGCSLF*VTSEGK
Trigger: CTTGCCTTCGGATGTTACTCAAAATAGTGAACAACC...CAATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp TGGGATGGAAAAACTTGGAGTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCAATGTAGAGTCTAGCTaGATGGACATATTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: WDGKTWSDAAWSCRSLVCNVESS*MDIFSE
Trigger: CTCAGAAAATATGTCCATTCAGCTAGACTCTACATT...GCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTCTGTTTGACATGGGATaGTGTAGACTTAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: SRLCWAVACWVWTSWYRALFDMG*CRLRWH
Trigger: ATGCCATCTAAGTCTACATCATCCCATGTCAAACAG...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCATGGGAAGGTATGTCTTaGGGTGGCATGGCGTGGGAT +
Preference number: 4 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGAWEGMS*GGMAWD
Trigger: ATCCCACGCCATGCCACCTCAAGACATACCTTCCCA...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCTGGGTTTGCTTCTTTaGGTTTTGCTCCTTATCAGT +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSLGLLL*VLLLIS
Trigger: ACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAG...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GCTGATCCTGGGTTTGCTTCTTTGAGTTTTGCTCCTTATCAGTCTGCTGGTCTTTGCTGTCCTTCGGCTTaGACATTTTGGAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: ADPGFASLSFAPYQSAGLCCPSA*TFWNCP
Trigger: AGGACAATTCCAAAATGTTCAAGCCGAAGGACAGCA...AAGACCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAGGATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGTCTTGGCCAAAAGATTaGCAGTCCTGGGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GLVGLYLECLDILGYVGLSWPKD*QSWVVQ
Trigger: CTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGA...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTTCTTGGCCAAAAGATTaGCAGTCCTGGGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPSWPKD*QSWVVQ
Trigger: CTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGA...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTTTGTTTCTCCAGCCCTaGGTTATCCAGTCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPLFLQP*VIQSGD
Trigger: ATCCCCTGACTGGATAACTCAGGGCTGGAGAAACAA...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGTTGTTTCTCCAGCCCTaGGTTATCCAGTCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: GLVGLYLECLDILGYVGLLFLQP*VIQSGD
Trigger: ATCCCCTGACTGGATAACTCAGGGCTGGAGAAACAA...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTGTAACTCTGGATTaGAGGTCTTGTTGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISCVTLD*RSCWSL
Trigger: TAAAGACCAACAAGACCTTCAATCCAGAGTTACACA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp AGCCAGTCTTTGATTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTACATGTGTCTTGTACTaGGCTTTGGCCAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SQSLICWSKDFCFGDCQPTCVLY*ALARRR
Trigger: TCTTCTTCTGGCCAAAGCTCAGTACAAGACACATGT...AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp TTCACTATTTTGAGTAACATCCGAAGGCAAGAAAAACAGAACCTGGTGACGGTTAAGAAGCTGATCCTCTaGTCATCTTGGGGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: FTILSNIRRQEKQNLVTVKKLIL*SSWGRG
Trigger: TCCACGGCCCCAAGATGATCAGAGGATCAGCTTCTT...AACCGTCACCAGGTTCTGTTTTTCTTGCCTTCGGATGTTACTCAAAATAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525397.5
ENST00000527841.5
CDS-3UTR TCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTAAGAAGCTGATCCTCTaGTCATCTTGGGGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIKKLIL*SSWGRG
Trigger: TCCACGGCCCCAAGATGATCAGAGGATCAGCTTCTT...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGCTGATCCTCTaGTCATCTTGGGGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQKKLIL*SSWGRG
Trigger: TCCACGGCCCCAAGATGATCAGAGGATCAGCTTCTT...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp GTCTCCTGGAGGGCCATATTTATGGAATTCATTACCCTAGGACGTGAAGCAGTTATGATGGTAGTGCAGTaGCCAAATGGAGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VSWRAIFMEFITLGREAVMMVVQ*PNGVAS
Trigger: AGAAGCAACTCCATTTGGTCACTGCACTACCATCAT...AACTGCTTCACGTCCTAGGGTAATGAATTCCATAAATATGGCCCTCCAGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS-3UTR GCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTAGAGTGAGCAAACATTaGCGCCCAAATCATGATCTA +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSRVSKH*RPNHDL
Trigger: TAGATCATGATTTGGGCGGCAATGTTTGCTCACTCT...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCAGAGTGAGCAAACATTaGCGCCCAAATCATGATCTA +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSRVSKH*RPNHDL
Trigger: TAGATCATGATTTGGGCGGCAATGTTTGCTCACTCT...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp CAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTGTGGAATTGAGAGTGAGCAAACATTaGCGCCCAAATCATGATCTA +
Preference number: 4 (lower is better)
Translates to: QKIDSPGLSSLEIAFVELRVSKH*RPNHDL
Trigger: TAGATCATGATTTGGGCGGCAATGTTTGCTCACTCT...CAATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGAGTGATGACGTGAGTTaGCCTTCTGTCCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: GLVGLYLECLDILGYVGLSDDVS*PSVLGC
Trigger: ACATCCCAGGACAGAAGGGCAACTCACGTCATCACT...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCAGTGATGACGTGAGTTaGCCTTCTGTCCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISSDDVS*PSVLGC
Trigger: ACATCCCAGGACAGAAGGGCAACTCACGTCATCACT...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp GGCATAACAGTTTTGGCACTTTCTCCACCTGAGCTTGCTGTCCTTCGGCTTGAAAGGTCTGTAGGGAAATaGAGTCAATACAGTTTCGTT +
Preference number: 4 (lower is better)
Translates to: GITVLALSPPELAVLRLERSVGK*SQYSFV
Trigger: AACGAAACTGTATTGACTGCATTTCCCTACAGACCT...TTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCCAAAACTGTTATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp GATGATGGTAGTGCAGTGACCAAATGGAGTTGCTTCTTTTGCCGTGAAGGGAGCAGGTCTGTAGGGAAATaGAGTCAATACAGTTTCGTT +
Preference number: 4 (lower is better)
Translates to: DDGSAVTKWSCFFCREGSRSVGK*SQYSFV
Trigger: AACGAAACTGTATTGACTGCATTTCCCTACAGACCT...GCTCCCTTCACGGCAAAAGAAGCAACTCCATTTGGTCACTGCACTACCATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS-3UTR GCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCAAGCATATCTAGGGATTaGATATCTTGGGATGTCATG +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISSISRD*ISWDVM
Trigger: CATGACATCCCAAGATATGCAATCCCTAGATATGCT...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGTAATATGGCATGCGCTGATAGAGCTTGGGATAGCATATCTTGGGAAGGTATGTCAGGTAATATGGCATaGGCTGATAGAGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: GNMACADRAWDSISWEGMSGNMA*ADRAWD
Trigger: ATCCCAAGCTCTATCAGCGCATGCCATATTACCTGA...CATACCTTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTGTATTTCAGGGAACTaGACAATATGGGATGTTGAG +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGCISGN*TIWDVE
Trigger: CTCAACATCCCATATTGTGCAGTTCCCTGAAATACA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGCATAACAGTTTTGGCACTTTCTCCACCTGAGCTTGCTGTCCTTCGGCTTGAATGTATTTCAGGGAACTaGACAATATGGGATGTTGAG +
Preference number: 4 (lower is better)
Translates to: GITVLALSPPELAVLRLECISGN*TIWDVE
Trigger: CTCAACATCCCATATTGTGCAGTTCCCTGAAATACA...TTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCCAAAACTGTTATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTGTCTCCTTAAGTATTaGAAGGCTTTGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSCLLKY*KALVCW
Trigger: CCAGCAAACCAAAGCCTTGCAATACTTAAGGAGACA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTGTCTCCTTAAGTATTaGAAGGCTTTGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELCLLKY*KALVCW
Trigger: CCAGCAAACCAAAGCCTTGCAATACTTAAGGAGACA...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GTTGAAGATCTGGGGGCTGCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAATGTCTCCTTAAGTATTaGAAGGCTTTGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VEDLGAAEVGVVFQGTAQCLLKY*KALVCW
Trigger: CCAGCAAACCAAAGCCTTGCAATACTTAAGGAGACA...TTGTGCAGTTCCCTGAAATACAACACCTACTTCAGCAGCCCCCAGATCTTCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTGAGATTGCCAGCCTTTaGTTTGCTGATCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLEIASL*FADLRN
Trigger: ATTCCTTAGATCAGCAAAGCAAAGGCTGGCAATCTC...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTGAGATTGCCAGCCTTTaGTTTGCTGATCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCEIASL*FADLRN
Trigger: ATTCCTTAGATCAGCAAAGCAAAGGCTGGCAATCTC...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp GGTAATATGGCATGCGCTGATAGAGCTTGGGATAGCATATCTTGGGAAGGTATGTGGTCTAAGGATTTCTaGTTTGGAGATTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GNMACADRAWDSISWEGMWSKDF*FGDCQP
Trigger: AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCA...CATACCTTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGCTCCTTATCAGTCTaGTGGTCTTTAACTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLICSLSV*WSLTCP
Trigger: TGGACAAGTTAAAGACCAGCAGACTGATAAGGAGCA...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTTGCTTCTTTGAGTTTTaGTCCTTATCAGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLCFFEF*SLSVCW
Trigger: CCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCA...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTGCTTCTTTGAGTTTTaGTCCTTATCAGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSCFFEF*SLSVCW
Trigger: CCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATTGCCTTTGTGGAATTaGCAGAATTGGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISLPLWN*QNWYCC
Trigger: ACAGCAATACCAATTCTGGCAATTCCACAAAGGCAA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGGTCCAGCCTGGAGATTaGCTTTGTGGAATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GLVGLYLECLDILGYVGLVQPGD*LCGIAR
Trigger: TCTGGCAATTCCACAAAGGCAATCTCCAGGCTGGAC...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTGTTGGGCTGTTGCGTaGTGGGTTTGGACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWCWAVA*WVWTSW
Trigger: CCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTACCTTTATTACCTGGTTGGGAGACTAAAGGACTCCTAGAGAGTGTTAACTTGGTTATGTTGGGCTGTTaGGTGCTGGGTTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: LPLLPGWETKGLLESVNLVMLGC*VLGLDF
Trigger: GAAGTCCAAACCCAGCACGCAACAGCCCAACATAAC...CAAGTTAACACTCTCTAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCAGGTCCCCTGAGGTTTaGCCTATACATTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFRSPEV*PIHFMS
Trigger: GGACATGAAATGTATAGGGCAAACCTCAGGGGACCT...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATAGAGCAAGCAGGATCTaGGTAGCCCCCAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: FEDFWPLACTSKECLLKYRASRI*VAPKTL
Trigger: AAGAGTCTTGGGGGCTACCCAGATCCTGCTTGCTCT...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGGGTCCTGCAGAAGCTTaGTTTGCATTTGAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIEGPAEA*FAFEKV
Trigger: AACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACC...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTTGGAGTGACGCAGCTTaGTCCTGCAGAAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LGDGRILCFCSSGTNSLPWSDAA*SCRSLV
Trigger: AACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCA...AGGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTGGGATGGAAAAACTTaGAGTGACGCAGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISWDGKT*SDAAWS
Trigger: GGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGAAGACTGTTTGACATaGGATGATGTAGACTTAGAT +
Preference number: 4 (lower is better)
Translates to: RLLIAGPLRFALYISCPLEDCLT*DDVDLD
Trigger: ATCTAAGTCTACATCATCCCATGTCAAACAGTCTTC...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTGTCTTGAGGTGGCATaGCGTGGGATGGTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFICLEVA*RGMVCL
Trigger: AAGACACACCATCCCACGCCATGCCACCTCAAGACA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTAGGTATGTCTTGAGGTaGCATGGCGTGGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIRYVLR*HGVGWC
Trigger: ACACCATCCCACGCCATGCCACCTCAAGACATACCT...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTGAGGATTTTCTTCTATaGAGTTCCTCCTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGEDFLL*SSSSDF
Trigger: GAAATCTGAGGAGGAACTCCATAGAAGAAAATCCTC...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTAAGGCTTTGGTTTGCTaGTTTAAGGAATGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCKALVC*FKECRL
Trigger: AAGACGGCATTCCTTAAACCAGCAAACCAAAGCCTT...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTAGGATTTCTGGCCTTTaGCTTGCACGTCTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELRISGL*LARLKN
Trigger: ATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCT...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTTTCAGCTTGCTGATCTaGGAGTTGCTCTTTAGTTTG +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLFSLLI*ELLFSL
Trigger: CAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAA...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTTTTAGATTGTCCTTCTaGGTATTGTTCCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLFRLSF*VLFPFG
Trigger: GCCAAAGGGGAACAATACCCAGAAGGACAATCTAAA...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGTGGGATTCTGAATCTTaGCATAACAGTTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRWDSES*HNSFGT
Trigger: AGTGCCAAAACTGTTATGCCAAGATTCAGAATCCCA...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTCTGGGTTGTCCAGCCTaGAGATTGCCTTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPLGCPA*RLPLWN
Trigger: ATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAG...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCGTTGCGTGCTGGGTTTaGACTTCTTGGTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFVACWV*TSWYRA
Trigger: AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAAC...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTACATTTCATGTCCCCTaGTTTGATGTCTCTAGTGTA +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGTFHVP*FDVSSV
Trigger: TACACTAGAGACATCAAACCAGGGGACATGAAATGT...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp AATGATGATGGTAGTGCAGTGACCAAATGGAGTTGCTTCTTTTGCCGTGAAGGGAGTGCAGTGACCAAATaGAGTTGCTTCTTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: NDDGSAVTKWSCFFCREGSAVTK*SCFFCR
Trigger: ACGGCAAAAGAAGCAACTCCATTTGGTCACTGCACT...CCCTTCACGGCAAAAGAAGCAACTCCATTTGGTCACTGCACTACCATCATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531949.1
3UTR CAA 72 bp CTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGTaGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LECLDILGYVGL*RAGFGLLGIEL
Trigger: AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATGTCAAGACACTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR CAA 72 bp GGTGTTGTATTTCAGGGAACTGCACAATATGGGATGTaGAGGCTTCAGGTAATATGGCATGCGCTGATAGAG +
Preference number: 4 (lower is better)
Translates to: GVVFQGTAQYGM*RLQVIWHALIE
Trigger: CTCTATCAGCGCATGCCATATTACCTGAAGCCTCAACATCCCATATTGTGCAGTTCCCTGAAATACAACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTGGAGCCCTCAGAGATaGGCCCTTAGTGATGACTCT +
Preference number: 4 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSWSPQR*ALSDDS
Trigger: AGAGTCATCACTAAGGGCTCATCTCTGAGGGCTCCA...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
CDS-3UTR TCA 90 bp GGCTTGCTGATCTTCAGCTTGCTGATCTGGGAGTTGCTCTTTAGTTTGATTAAGGGGATGTTGACTCCATaGTTCTATGGCAGAACTCTA +
Preference number: 4 (lower is better)
Translates to: GLLIFSLLIWELLFSLIKGMLTP*FYGRTL
Trigger: TAGAGTTCTGCCATAGAATCATGGAGTCAACATCCC...CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp CTAGCTGAATGGACATATTTTCTGAGGGCTTTTTCTCTAGTGTGGGAGGCAAAGGGGATGTTGACTCCATaGTTCTATGGCAGAACTCTA +
Preference number: 4 (lower is better)
Translates to: LAEWTYFLRAFSLVWEAKGMLTP*FYGRTL
Trigger: TAGAGTTCTGCCATAGAATCATGGAGTCAACATCCC...CTTTGCCTCCCACACTAGAGAAAAAGCCCTCAGAAAATATGTCCATTCAGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGTCTGTCCTGGGATGTTaGCTCCATGATTCTATGGCA +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKSVLGC*LHDSMA
Trigger: TGCCATAGAATCATGGAGTCAACATCCCAGGACAGA...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGAGAATGGATATCCTGTaGGGACAACAAGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKRMDIL*GQQGEV
Trigger: GACTTCCCCTTGTTGTCCTCACAGGATATCCATTCT...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGGGTTGTTCACTATTTTaGGTAACATCCGAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIEGCSLF*VTSEGK
Trigger: CTTGCCTTCGGATGTTACTCAAAATAGTGAACAACC...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGTAATATGGCATGCGCTGATAGAGCTTGGGATAGCATATCTTGGGAAGGTATGGGTTGTTCACTATTTTaGGTAACATCCGAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: GNMACADRAWDSISWEGMGCSLF*VTSEGK
Trigger: CTTGCCTTCGGATGTTACTCAAAATAGTGAACAACC...CATACCTTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTAATGTAGAGTCTAGCTaGATGGACATATTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGNVESS*MDIFSE
Trigger: CTCAGAAAATATGTCCATTCAGCTAGACTCTACATT...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGAATGTAGAGTCTAGCTaGATGGACATATTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRNVESS*MDIFSE
Trigger: CTCAGAAAATATGTCCATTCAGCTAGACTCTACATT...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTGTTTGACATGGGATaGTGTAGACTTAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIELFDMG*CRLRWH
Trigger: ATGCCATCTAAGTCTACATCATCCCATGTCAAACAG...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp AGCCAGTCTTTGATTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTCTGGGTTTGCTTCTTTaGGTTTTGCTCCTTATCAGT +
Preference number: 4 (lower is better)
Translates to: SQSLICWSKDFCFGDCQPLGLLL*VLLLIS
Trigger: ACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAG...AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGACTGGGTTTGCTTCTTTaGGTTTTGCTCCTTATCAGT +
Preference number: 4 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRLGLLL*VLLLIS
Trigger: ACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAG...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTCTTGGCCAAAAGATTaGCAGTCCTGGGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWSWPKD*QSWVVQ
Trigger: CTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATTCTTGGCCAAAAGATTaGCAGTCCTGGGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: FEDFWPLACTSKECLLKYSWPKD*QSWVVQ
Trigger: CTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGA...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp TTTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTTGTTTCTCCAGCCCTaGGTTATCCAGTCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: FGRWKDTLLLFIWHKFSTLFLQP*VIQSGD
Trigger: ATCCCCTGACTGGATAACTCAGGGCTGGAGAAACAA...GGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTTGTGTAACTCTGGATTaGAGGTCTTGTTGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLCVTLD*RSCWSL
Trigger: TAAAGACCAACAAGACCTTCAATCCAGAGTTACACA...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTGTGTAACTCTGGATTaGAGGTCTTGTTGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: SRLCWAVACWVWTSWYRACVTLD*RSCWSL
Trigger: TAAAGACCAACAAGACCTTCAATCCAGAGTTACACA...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTGTGTAACTCTGGATTaGAGGTCTTGTTGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELCVTLD*RSCWSL
Trigger: TAAAGACCAACAAGACCTTCAATCCAGAGTTACACA...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATCTTCAGATTGCTGTTaGTCTTTTGGATCACATGAA +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISSSDCC*SFGSHE
Trigger: TTCATGTGATCCAAAAGATCAACAGCAATCTGAAGA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTCTTCAGATTGCTGTTaGTCTTTTGGATCACATGAA +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGSSDCC*SFGSHE
Trigger: TTCATGTGATCCAAAAGATCAACAGCAATCTGAAGA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGGGTGGCAACCACAGTTaGGAACACAGATTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMGGNHS*EHRLEE
Trigger: CTCCTCCAATCTGTGTTCTCAACTGTGGTTGCCACC...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAGGTGGCAACCACAGTTaGGAACACAGATTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTGGNHS*EHRLEE
Trigger: CTCCTCCAATCTGTGTTCTCAACTGTGGTTGCCACC...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGAAACAGAACCTCATCTaGCTGTGTCCAGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: GLVGLYLECLDILGYVGLKQNLI*LCPALA
Trigger: AGCAAGTGCTGGACACAGTCAGATGAGGTTCTGTTT...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395001.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATAGTGATGACGTGAGTTaGCCTTCTGTCCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: FEDFWPLACTSKECLLKYSDDVS*PSVLGC
Trigger: ACATCCCAGGACAGAAGGGCAACTCACGTCATCACT...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAGTGATGACGTGAGTTaGCCTTCTGTCCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQSDDVS*PSVLGC
Trigger: ACATCCCAGGACAGAAGGGCAACTCACGTCATCACT...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCAGGTCTGTAGGGAAATaGAGTCAATACAGTTTCGTT +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSRSVGK*SQYSFV
Trigger: AACGAAACTGTATTGACTGCATTTCCCTACAGACCT...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTGACGCAGCTTGGTCCTaGAGAAGCTTGGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIDAAWS*RSLVCI
Trigger: AATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTC...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCGACGCAGCTTGGTCCTaGAGAAGCTTGGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIDAAWS*RSLVCI
Trigger: AATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTC...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTGTCTTGGGATAGTATaGCTTGAGGGGGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFICLGIV*LEGAGH
Trigger: ATGACCTGCCCCCTCAAGGCATACTATCCCAAGACA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TATCTTGGGATGTCATGTCATGAAACAGCATATCTTGAGATGATGTGTCTTGGGTGTCTTGGGATAGTATaGCTTGAGGGGGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: YLGMSCHETAYLEMMCLGCLGIV*LEGAGH
Trigger: ATGACCTGCCCCCTCAAGGCATACTATCCCAAGACA...CCCAAGACACATCATCTCAAGATATGCTGTTTCATGACATGACATCCCAAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCAGCATATCTAGGGATTaGATATCTTGGGATGTCATG +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSSISRD*ISWDVM
Trigger: CATGACATCCCAAGATATGCAATCCCTAGATATGCT...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTAGCATATCTAGGGATTaGATATCTTGGGATGTCATG +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSSISRD*ISWDVM
Trigger: CATGACATCCCAAGATATGCAATCCCTAGATATGCT...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GTTGAAGATCTGGGGGCTGCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAATGCTGGTTTAAGGAATaGCGTCTTGAGGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: VEDLGAAEVGVVFQGTAQCWFKE*RLEDFL
Trigger: AAGAAAATCCTCAAGACGGCATTCCTTAAACCAGCA...TTGTGCAGTTCCCTGAAATACAACACCTACTTCAGCAGCCCCCAGATCTTCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGAGCCAGTCTTTGATTTaGTGGTCTAAGGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIESQSLI*WSKDFC
Trigger: GCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTGCTTATCTACGGAGTaGCTCTTTGGGGATAGCCAG +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFICLSTE*LFGDSQ
Trigger: CTGGCTATCCCCAAAGAGGCACTCCGTAGATAAGCA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCTGCTTATCTACGGAGTaGCTCTTTGGGGATAGCCAG +
Preference number: 4 (lower is better)
Translates to: RASFSNRSCVCQCFISNCCLSTE*LFGDSQ
Trigger: CTGGCTATCCCCAAAGAGGCACTCCGTAGATAAGCA...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTGCCAGAATTGGTATTaGTGTATTTGGGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGCQNWY*CIWDSE
Trigger: TTCAGAATCCCAAATACAGCAATACCAATTCTGGCA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTTGCCTTTGTGGAATTaGCAGAATTGGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSLPLWN*QNWYCC
Trigger: ACAGCAATACCAATTCTGGCAATTCCACAAAGGCAA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGGTCCAGCCTGGAGATTaGCTTTGTGGAATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWVQPGD*LCGIAR
Trigger: TCTGGCAATTCCACAAAGGCAATCTCCAGGCTGGAC...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTGTTATGTTGGGCTGTTaGGTGCTGGGTTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIVMLGC*VLGLDF
Trigger: GAAGTCCAAACCCAGCACGCAACAGCCCAACATAAC...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTGTTATGTTGGGCTGTTaGGTGCTGGGTTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: LGDGRILCFCSSGTNSLPVMLGC*VLGLDF
Trigger: GAAGTCCAAACCCAGCACGCAACAGCCCAACATAAC...AGGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGGTTATGTTGGGCTGTTaGGTGCTGGGTTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQVMLGC*VLGLDF
Trigger: GAAGTCCAAACCCAGCACGCAACAGCCCAACATAAC...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTACCTTTATTACCTGGTTGGGAGACTAAAGGACTCCTAGAGAGTGTTAACTTGAGGTCCCCTGAGGTTTaGCCTATACATTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: LPLLPGWETKGLLESVNLRSPEV*PIHFMS
Trigger: GGACATGAAATGTATAGGGCAAACCTCAGGGGACCT...CAAGTTAACACTCTCTAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TATCTTGGGATGTCATGTCATGAAACAGCATATCTTGAGATGATGTGTCTTGGGAGCCCCCAAGACTCTTaGCTCTCCCTTCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: YLGMSCHETAYLEMMCLGSPQDS*LSLQKI
Trigger: GATTTTCTGAAGGGAGAGCCAAGAGTCTTGGGGGCT...CCCAAGACACATCATCTCAAGATATGCTGTTTCATGACATGACATCCCAAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCAGAGCAAGCAGGATCTaGGTAGCCCCCAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSRASRI*VAPKTL
Trigger: AAGAGTCTTGGGGGCTACCCAGATCCTGCTTGCTCT...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGAAGTGCTCCCCAGAATaGATATCCTGTGAGGACAAC +
Preference number: 4 (lower is better)
Translates to: GLVGLYLECLDILGYVGLKCSPE*ISCEDN
Trigger: GTTGTCCTCACAGGATATCCATTCTGGGGAGCACTT...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGTTGTTGAATCATCACTaGAAAACTCTTCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RLLIAGPLRFALYISCPLLLNHH*KTLLEA
Trigger: TGCTTCAAGAAGAGTTTTCCAGTGATGATTCAACAA...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCGGTCCTGCAGAAGCTTaGTTTGCATTTGAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFGPAEA*FAFEKV
Trigger: AACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACC...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGTGGAGTGACGCAGCTTaGTCCTGCAGAAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWWSDAA*SCRSLV
Trigger: AACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCA...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCTGGGATGGAAAAACTTaGAGTGACGCAGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIWDGKT*SDAAWS
Trigger: GGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTTGGGATGGAAAAACTTaGAGTGACGCAGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LGDGRILCFCSSGTNSLPWDGKT*SDAAWS
Trigger: GGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA...AGGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGTCTACTGGTAGAGCTTaGGATGGCAAGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKSTGRA*DGKSSG
Trigger: ACCTGAAGACTTGCCATCCCAAGCTCTACCAGTAGA...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATGTCTTGAGGTGGCATaGCGTGGGATGGTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTCLEVA*RGMVCL
Trigger: AAGACACACCATCCCACGCCATGCCACCTCAAGACA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGAGGTATGTCTTGAGGTaGCATGGCGTGGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWRYVLR*HGVGWC
Trigger: ACACCATCCCACGCCATGCCACCTCAAGACATACCT...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGAGGTATGTCTTGAGGTaGCATGGCGTGGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMRYVLR*HGVGWC
Trigger: ACACCATCCCACGCCATGCCACCTCAAGACATACCT...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGGGGAACTGCACAATATaGGATGTTGAGGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GLVGLYLECLDILGYVGLGNCTI*DVEASG
Trigger: ACCTGAAGCCTCAACATCCCATATTGTGCAGTTCCC...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCGGGAACTGCACAATATaGGATGTTGAGGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISGNCTI*DVEASG
Trigger: ACCTGAAGCCTCAACATCCCATATTGTGCAGTTCCC...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GTTGAAGATCTGGGGGCTGCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAAGAGGATTTTCTTCTATaGAGTTCCTCCTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: VEDLGAAEVGVVFQGTAQEDFLL*SSSSDF
Trigger: GAAATCTGAGGAGGAACTCCATAGAAGAAAATCCTC...TTGTGCAGTTCCCTGAAATACAACACCTACTTCAGCAGCCCCCAGATCTTCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTGAGGATTTTCTTCTATaGAGTTCCTCCTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELEDFLL*SSSSDF
Trigger: GAAATCTGAGGAGGAACTCCATAGAAGAAAATCCTC...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTACCTTTATTACCTGGTTGGGAGACTAAAGGACTCCTAGAGAGTGTTAACTTGCTCTTTGAGGATTTCTaGCCTTTGGCTTGCACGTCT +
Preference number: 4 (lower is better)
Translates to: LPLLPGWETKGLLESVNLLFEDF*PLACTS
Trigger: AGACGTGCAAGCCAAAGGCCAGAAATCCTCAAAGAG...CAAGTTAACACTCTCTAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CTAGCTGAATGGACATATTTTCTGAGGGCTTTTTCTCTAGTGTGGGAGGCAAAGGGTATTGTTCCCCTTTaGCTTGCTGATCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LAEWTYFLRAFSLVWEAKGIVPL*LADLQL
Trigger: AAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACC...CTTTGCCTCCCACACTAGAGAAAAAGCCCTCAGAAAATATGTCCATTCAGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGTTTAGATTGTCCTTCTaGGTATTGTTCCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIEFRLSF*VLFPFG
Trigger: GCCAAAGGGGAACAATACCCAGAAGGACAATCTAAA...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCTCCTTATCAGTCTGCTaGTCTTTAACTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSSLSVC*SLTCPS
Trigger: AGATGGACAAGTTAAAGACCAGCAGACTGATAAGGA...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTCCTTATCAGTCTGCTaGTCTTTAACTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSSLSVC*SLTCPS
Trigger: AGATGGACAAGTTAAAGACCAGCAGACTGATAAGGA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTTGGGATTCTGAATCTTaGCATAACAGTTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLWDSES*HNSFGT
Trigger: AGTGCCAAAACTGTTATGCCAAGATTCAGAATCCCA...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCTGGGATTCTGAATCTTaGCATAACAGTTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSWDSES*HNSFGT
Trigger: AGTGCCAAAACTGTTATGCCAAGATTCAGAATCCCA...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTGGTATTGCTGTATTTaGGATTCTGAATCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGWYCCI*DSESWH
Trigger: ATGCCAAGATTCAGAATCCCAAATACAGCAATACCA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCCTGGGTTGTCCAGCCTaGAGATTGCCTTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: RASFSNRSCVCQCFISNCLGCPA*RLPLWN
Trigger: ATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAG...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGCTGGGTTGTCCAGCCTaGAGATTGCCTTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWLGCPA*RLPLWN
Trigger: ATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAG...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTGGGCTGTTGCGTGCTaGGTTTGGACTTCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: FGRWKDTLLLFIWHKFSTWAVAC*VWTSWY
Trigger: ATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA...GGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTGGGCTGTTGCGTGCTaGGTTTGGACTTCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWWAVAC*VWTSWY
Trigger: ATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTACATTTCATGTCCCCTaGTTTGATGTCTCTAGTGTA +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLTFHVP*FDVSSV
Trigger: TACACTAGAGACATCAAACCAGGGGACATGAAATGT...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTAGCTGAATGGACATATTTTCTGAGGGCTTTTTCTCTAGTGTGGGAGGCAAAGTTAATGGGGGCAGTGTaGTATTGGGTAGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: LAEWTYFLRAFSLVWEAKLMGAV*YWVDSA
Trigger: TGCAGAATCTACCCAATACCACACTGCCCCCATTAA...CTTTGCCTCCCACACTAGAGAAAAAGCCCTCAGAAAATATGTCCATTCAGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TTTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCAGGGATTATAGGAAGTaGCTGGAGTGTGGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: FGRWKDTLLLFIWHKFSTRDYRK*LECGGV
Trigger: CACTCCTCCACACTCCAGCCACTTCCTATAATCCCT...GGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 72 bp TTGCTGATCTGGGAGTTGCTCTTTAGTTTGATTAAGTaGAGCTTGCTTATCTACGGAGTGCCTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LLIWELLFSLIK*SLLIYGVPLWG
Trigger: TCCCCAAAGAGGCACTCCGTAGATAAGCAAGCTCAACTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 72 bp TGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTaGCTGATCTGGGAGTTGCTCTTTAGTTTGATTAAG +
Preference number: 4 (lower is better)
Translates to: WVLFPFGLLIFS*LIWELLFSLIK
Trigger: CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
3UTR CAA 72 bp ATCAGTCTGCTGGTCTTTAACTTGTCCATCTTTAGATaGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: ISLLVFNLSIFR*SFWVLFPFGLL
Trigger: CAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAATCTAAAGATGGACAAGTTAAAGACCAGCAGACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGTGGAGCCCTCAGAGATaGGCCCTTAGTGATGACTCT +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLWSPQR*ALSDDS
Trigger: AGAGTCATCACTAAGGGCTCATCTCTGAGGGCTCCA...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
CDS-3UTR TCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTTGCCGCCCAAATCATaGTCTACCTCTCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLLPPKS*STSPPE
Trigger: CTCTGGTGGAGAGGTAGATCATGATTTGGGCGGCAA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGGGGATGTTGACTCCATaGTTCTATGGCAGAACTCTA +
Preference number: 4 (lower is better)
Translates to: GLVGLYLECLDILGYVGLGMLTP*FYGRTL
Trigger: TAGAGTTCTGCCATAGAATCATGGAGTCAACATCCC...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCTGTCCTGGGATGTTaGCTCCATGATTCTATGGCA +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFISVLGC*LHDSMA
Trigger: TGCCATAGAATCATGGAGTCAACATCCCAGGACAGA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCTCTGTCCTGGGATGTTaGCTCCATGATTCTATGGCA +
Preference number: 4 (lower is better)
Translates to: RASFSNRSCVCQCFISNCSVLGC*LHDSMA
Trigger: TGCCATAGAATCATGGAGTCAACATCCCAGGACAGA...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCTTTATAGTGATGACGTaGGTTGCCCTTCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIFIVMT*VALLSW
Trigger: CCAGGACAGAAGGGCAACTCACGTCATCACTATAAA...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGTTTATAGTGATGACGTaGGTTGCCCTTCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQFIVMT*VALLSW
Trigger: CCAGGACAGAAGGGCAACTCACGTCATCACTATAAA...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp TATCTTGGGATGTCATGTCATGAAACAGCATATCTTGAGATGATGTGTCTTGGGAGAATGGATATCCTGTaGGGACAACAAGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: YLGMSCHETAYLEMMCLGRMDIL*GQQGEV
Trigger: GACTTCCCCTTGTTGTCCTCACAGGATATCCATTCT...CCCAAGACACATCATCTCAAGATATGCTGTTTCATGACATGACATCCCAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp ATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTTTGACCCAGAAGTTTTaGTTTCTTATCGGTTACTGT +
Preference number: 4 (lower is better)
Translates to: ILGQKIDSPGLSSLEIAFLTQKF*FLIGYC
Trigger: ACAGTAACCGATAAGAAATCAAAACTTCTGGGTCAA...AAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525397.5
CDS-3UTR TCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCTTGTGCATTTGTTGTTaGATCATCACTGGAAAACTC +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSLCICC*IITGKL
Trigger: GAGTTTTCCAGTGATGATTCAACAACAAATGCACAA...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTTGTGCATTTGTTGTTaGATCATCACTGGAAAACTC +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSLCICC*IITGKL
Trigger: GAGTTTTCCAGTGATGATTCAACAACAAATGCACAA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp ATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTTTCAATTTCTTCCTCTaGAAATTTGGGAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: ILGQKIDSPGLSSLEIAFFNFFL*KFGRWK
Trigger: CTTCCATCTCCCAAATTTTCAGAGGAAGAAATTGAA...AAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp AGATTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGAATGTAGAGTCTAGCTaGATGGACATATTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: RLSFWVLFPFGLLIFSLLNVESS*MDIFSE
Trigger: CTCAGAAAATATGTCCATTCAGCTAGACTCTACATT...CAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTAATGTAGAGTCTAGCTaGATGGACATATTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLNVESS*MDIFSE
Trigger: CTCAGAAAATATGTCCATTCAGCTAGACTCTACATT...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTAATGTAGAGTCTAGCTaGATGGACATATTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SRLCWAVACWVWTSWYRANVESS*MDIFSE
Trigger: CTCAGAAAATATGTCCATTCAGCTAGACTCTACATT...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTTGGGATGGTGTGTCTTaGGATAGCATATCTAGGGAT +
Preference number: 4 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPWDGVS*DSISRD
Trigger: ATCCCTAGATATGCTATCTCAAGACACACCATCCCA...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAGATCTGGGGGCTGCTaGAGTAGGTGTTGTATTTCA +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQRSGGC*SRCCIS
Trigger: TGAAATACAACACCTACTTCAGCAGCCCCCAGATCT...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGTGGTCTTCAGTTTGCTaGTCCTGGGTTTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GLVGLYLECLDILGYVGLWSSVC*SWVCFF
Trigger: AAAGAAGCAAACCCAGGATCAGCAAACTGAAGACCA...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTCTTGGCCAAAAGATTaGCAGTCCTGGGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSSWPKD*QSWVVQ
Trigger: CTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGA...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTACATGTGTCTTGTACTaGGCTTTGGCCAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPTCVLY*ALARRR
Trigger: TCTTCTTCTGGCCAAAGCTCAGTACAAGACACATGT...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTGGTGGCAACCACAGTTaGGAACACAGATTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGGGNHS*EHRLEE
Trigger: CTCCTCCAATCTGTGTTCTCAACTGTGGTTGCCACC...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCAGTGATGACGTGAGTTaGCCTTCTGTCCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSSDDVS*PSVLGC
Trigger: ACATCCCAGGACAGAAGGGCAACTCACGTCATCACT...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCAAAGAATAAAAATAAGTaGTCCCCAGAATGGATATCC +
Preference number: 4 (lower is better)
Translates to: LPSRLLIAGPLRFALYISKNKNK*SPEWIS
Trigger: GGATATCCATTCTGGGGAGCACTTATTTTTATTCTT...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300187.11
ENST00000525397.5
ENST00000531783.5
CDS-3UTR GCA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGGACGCAGCTTGGTCCTaGAGAAGCTTGGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVDAAWS*RSLVCI
Trigger: AATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTC...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGACGCAGCTTGGTCCTaGAGAAGCTTGGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGADAAWS*RSLVCI
Trigger: AATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTC...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp AGATTAGAAGACTGTTTGACATGGGATGATGTAGACTTAGATGGCATGGTTTGTTGTCTTGGGATAGTATaGCTTGAGGGGGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RLEDCLTWDDVDLDGMVCCLGIV*LEGAGH
Trigger: ATGACCTGCCCCCTCAAGGCATACTATCCCAAGACA...ACAAACCATGCCATCTAAGTCTACATCATCCCATGTCAAACAGTCTTCTAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCTGTCTCCTTAAGTATTaGAAGGCTTTGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFCLLKY*KALVCW
Trigger: CCAGCAAACCAAAGCCTTGCAATACTTAAGGAGACA...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTTCTGGCCTTTGGCTTaGACGTCTAAAGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISFWPLA*TSKECL
Trigger: GAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGTGGTCTAAGGATTTCTaGTTTGGAGATTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKWSKDF*FGDCQP
Trigger: AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCA...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATGCTTATCTACGGAGTaGCTCTTTGGGGATAGCCAG +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTCLSTE*LFGDSQ
Trigger: CTGGCTATCCCCAAAGAGGCACTCCGTAGATAAGCA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTAGCTGAATGGACATATTTTCTGAGGGCTTTTTCTCTAGTGTGGGAGGCAAAGTGCTTCTTTGAGTTTTaGTCCTTATCAGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LAEWTYFLRAFSLVWEAKCFFEF*SLSVCW
Trigger: CCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCA...CTTTGCCTCCCACACTAGAGAAAAAGCCCTCAGAAAATATGTCCATTCAGCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTTGCCAGAATTGGTATTaGTGTATTTGGGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCCQNWY*CIWDSE
Trigger: TTCAGAATCCCAAATACAGCAATACCAATTCTGGCA...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGATTGCCTTTGTGGAATTaGCAGAATTGGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRLPLWN*QNWYCC
Trigger: ACAGCAATACCAATTCTGGCAATTCCACAAAGGCAA...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTCCAGCCTGGAGATTaGCTTTGTGGAATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGAVQPGD*LCGIAR
Trigger: TCTGGCAATTCCACAAAGGCAATCTCCAGGCTGGAC...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGGTCCAGCCTGGAGATTaGCTTTGTGGAATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMVQPGD*LCGIAR
Trigger: TCTGGCAATTCCACAAAGGCAATCTCCAGGCTGGAC...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTTATGTTGGGCTGTTaGGTGCTGGGTTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGAVMLGC*VLGLDF
Trigger: GAAGTCCAAACCCAGCACGCAACAGCCCAACATAAC...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCAGGTCCCCTGAGGTTTaGCCTATACATTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: RASFSNRSCVCQCFISNCRSPEV*PIHFMS
Trigger: GGACATGAAATGTATAGGGCAAACCTCAGGGGACCT...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAATATGGGATGTTGAGGCTTGACTCCATGATTCTATaGCAGAACTCTAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: AEVGVVFQGTAQYGMLRLDSMIL*QNSSKG
Trigger: TCCCTTACTAGAGTTCTGCCATAGAATCATGGAGTC...AAGCCTCAACATCCCATATTGTGCAGTTCCCTGAAATACAACACCTACTTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TATCTTGGGATGTCATGTCATGAAACAGCATATCTTGAGATGATGTGTCTTGGGGTTGCCCTTCTGTCCTaGGATGTTGACTCCATGATT +
Preference number: 4 (lower is better)
Translates to: YLGMSCHETAYLEMMCLGVALLS*DVDSMI
Trigger: AATCATGGAGTCAACATCCCAGGACAGAAGGGCAAC...CCCAAGACACATCATCTCAAGATATGCTGTTTCATGACATGACATCCCAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTAGAGCAAGCAGGATCTaGGTAGCCCCCAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLRASRI*VAPKTL
Trigger: AAGAGTCTTGGGGGCTACCCAGATCCTGCTTGCTCT...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGAAGTGCTCCCCAGAATaGATATCCTGTGAGGACAAC +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWKCSPE*ISCEDN
Trigger: GTTGTCCTCACAGGATATCCATTCTGGGGAGCACTT...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATAAGTGCTCCCCAGAATaGATATCCTGTGAGGACAAC +
Preference number: 4 (lower is better)
Translates to: FEDFWPLACTSKECLLKYKCSPE*ISCEDN
Trigger: GTTGTCCTCACAGGATATCCATTCTGGGGAGCACTT...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCTTGATCATTTTCTTCTaGGGCAGGTTGTTCACTATT +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSLIIFF*GRLFTI
Trigger: AATAGTGAACAACCTGCCCCAGAAGAAAATGATCAA...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTTTGATCATTTTCTTCTaGGGCAGGTTGTTCACTATT +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLLIIFF*GRLFTI
Trigger: AATAGTGAACAACCTGCCCCAGAAGAAAATGATCAA...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTGTGGAATTGTTGATCATTTTCTTCTaGGGCAGGTTGTTCACTATT +
Preference number: 4 (lower is better)
Translates to: QKIDSPGLSSLEIAFVELLIIFF*GRLFTI
Trigger: AATAGTGAACAACCTGCCCCAGAAGAAAATGATCAA...CAATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTTGATCATTTTCTTCTaGGGCAGGTTGTTCACTATT +
Preference number: 4 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLILIIFF*GRLFTI
Trigger: AATAGTGAACAACCTGCCCCAGAAGAAAATGATCAA...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CTAGCTGAATGGACATATTTTCTGAGGGCTTTTTCTCTAGTGTGGGAGGCAAAGCCTTTATTACCTGGTTaGGAGACTAAAGGACTCCTA +
Preference number: 4 (lower is better)
Translates to: LAEWTYFLRAFSLVWEAKPLLPG*ETKGLL
Trigger: TAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGG...CTTTGCCTCCCACACTAGAGAAAAAGCCCTCAGAAAATATGTCCATTCAGCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGGGTCCTGCAGAAGCTTaGTTTGCATTTGAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKGPAEA*FAFEKV
Trigger: AACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACC...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCTCTACTGGTAGAGCTTaGGATGGCAAGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RASFSNRSCVCQCFISNCSTGRA*DGKSSG
Trigger: ACCTGAAGACTTGCCATCCCAAGCTCTACCAGTAGA...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTAGGTATGTCTTGAGGTaGCATGGCGTGGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLRYVLR*HGVGWC
Trigger: ACACCATCCCACGCCATGCCACCTCAAGACATACCT...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTAGGCTTCAGGTAATATaGCATGCGCTGATAGAGCTT +
Preference number: 4 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPRLQVI*HALIEL
Trigger: AAGCTCTATCAGCGCATGCCATATTACCTGAAGCCT...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGAGGCTTCAGGTAATATaGCATGCGCTGATAGAGCTT +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKRLQVI*HALIEL
Trigger: AAGCTCTATCAGCGCATGCCATATTACCTGAAGCCT...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATAGGTTCAGTGTTTTCTaGTTGAAGATCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FEDFWPLACTSKECLLKYRFSVF*LKIWGL
Trigger: CAGCCCCCAGATCTTCAACCAGAAAACACTGAACCT...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGAGGTTCAGTGTTTTCTaGTTGAAGATCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWRFSVF*LKIWGL
Trigger: CAGCCCCCAGATCTTCAACCAGAAAACACTGAACCT...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTAGTATTGCAAGGCTTTaGTTTGCTGGTTTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSSIARL*FAGLRN
Trigger: ATTCCTTAAACCAGCAAACCAAAGCCTTGCAATACT...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGCTCTTTGAGGATTTCTaGCCTTTGGCTTGCACGTCT +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWLFEDF*PLACTS
Trigger: AGACGTGCAAGCCAAAGGCCAGAAATCCTCAAAGAG...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTGGTATTGTTCCCCTTTaGCTTGCTGATCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPGIVPL*LADLQL
Trigger: AAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACC...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTGGTATTGCTGTATTTaGGATTCTGAATCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELWYCCI*DSESWH
Trigger: ATGCCAAGATTCAGAATCCCAAATACAGCAATACCA...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCATTTGAGAAGGTTGTACAATGGTATTGCTGTATTTaGGATTCTGAATCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: VTQLGPAEAWFAFEKVVQWYCCI*DSESWH
Trigger: ATGCCAAGATTCAGAATCCCAAATACAGCAATACCA...TTGTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTGGTATTGCTGTATTTaGGATTCTGAATCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAWYCCI*DSESWH
Trigger: ATGCCAAGATTCAGAATCCCAAATACAGCAATACCA...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGTGGAGATTGCCTTTGTaGAATTGCCAGAATTGGTAT +
Preference number: 4 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIEWRLPL*NCQNWY
Trigger: ATACCAATTCTGGCAATTCCACAAAGGCAATCTCCA...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGGTTGCGTGCTGGGTTTaGACTTCTTGGTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQVACWV*TSWYRA
Trigger: AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAAC...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGGTTGCGTGCTGGGTTTaGACTTCTTGGTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWVACWV*TSWYRA
Trigger: AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAAC...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGTTAATGGGGGCAGTGTaGTATTGGGTAGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: GLVGLYLECLDILGYVGLLMGAV*YWVDSA
Trigger: TGCAGAATCTACCCAATACCACACTGCCCCCATTAA...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTGTTGAGAACACAGATTaGAGGAGGCAATATTGTTTT +
Preference number: 4 (lower is better)
Translates to: LLRAGFGLLGIELSALGLVENTD*RRQYCF
Trigger: AAAACAATATTGCCTCCTCCAATCTGTGTTCTCAAC...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTGTGGAATTGGTTGAGAACACAGATTaGAGGAGGCAATATTGTTTT +
Preference number: 4 (lower is better)
Translates to: QKIDSPGLSSLEIAFVELVENTD*RRQYCF
Trigger: AAAACAATATTGCCTCCTCCAATCTGTGTTCTCAAC...CAATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGTTGAGAACACAGATTaGAGGAGGCAATATTGTTTT +
Preference number: 4 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSVENTD*RRQYCF
Trigger: AAAACAATATTGCCTCCTCCAATCTGTGTTCTCAAC...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR CAA 72 bp AAGAAAAACAGAACCTCATCTGACTGTGTCCAGCACTaGCTTCTAAAGGATGCAATAGTCACAGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: KKNRTSSDCVQH*LLKDAIVTEML
Trigger: CAGCATCTCTGTGACTATTGCATCCTTTAGAAGCAAGTGCTGGACACAGTCAGATGAGGTTCTGTTTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530662.5
CDS-3UTR TCA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCATCTGTCCTGGGATGTTaGCTCCATGATTCTATGGCA +
Preference number: 4 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGASVLGC*LHDSMA
Trigger: TGCCATAGAATCATGGAGTCAACATCCCAGGACAGA...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATCTGTCCTGGGATGTTaGCTCCATGATTCTATGGCA +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTSVLGC*LHDSMA
Trigger: TGCCATAGAATCATGGAGTCAACATCCCAGGACAGA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTTTATAGTGATGACGTaGGTTGCCCTTCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVFIVMT*VALLSW
Trigger: CCAGGACAGAAGGGCAACTCACGTCATCACTATAAA...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGTTCCAAAGCCCACAATaGTTAGAGCAAGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQFQSPQ*LEQAGS
Trigger: AGATCCTGCTTGCTCTAATCATTGTGGGCTTTGGAA...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCGGTTGTTCACTATTTTaGGTAACATCCGAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISGCSLF*VTSEGK
Trigger: CTTGCCTTCGGATGTTACTCAAAATAGTGAACAACC...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGATTGTGCATTTGTTGTTaGATCATCACTGGAAAACTC +
Preference number: 4 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRLCICC*IITGKL
Trigger: GAGTTTTCCAGTGATGATTCAACAACAAATGCACAA...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTTGGGATGGTGTGTCTTaGGATAGCATATCTAGGGAT +
Preference number: 4 (lower is better)
Translates to: LGDGRILCFCSSGTNSLPWDGVS*DSISRD
Trigger: ATCCCTAGATATGCTATCTCAAGACACACCATCCCA...AGGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGAGATCTGGGGGCTGCTaGAGTAGGTGTTGTATTTCA +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWRSGGC*SRCCIS
Trigger: TGAAATACAACACCTACTTCAGCAGCCCCCAGATCT...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCGGGATAGCCAGTCTTTaGTTTGCTGGTCTAAGGATT +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIGIASL*FAGLRI
Trigger: AATCCTTAGACCAGCAAATCAAAGACTGGCTATCCC...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGCTGGGTTTGCTTCTTTaGGTTTTGCTCCTTATCAGT +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKLGLLL*VLLLIS
Trigger: ACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAG...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTGCTGTCCTTCGGCTTaGACATTTTGGAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWCCPSA*TFWNCP
Trigger: AGGACAATTCCAAAATGTTCAAGCCGAAGGACAGCA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCTGCTGTCCTTCGGCTTaGACATTTTGGAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: RASFSNRSCVCQCFISNCCCPSA*TFWNCP
Trigger: AGGACAATTCCAAAATGTTCAAGCCGAAGGACAGCA...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGTTGTTTCTCCAGCCCTaGGTTATCCAGTCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLLFLQP*VIQSGD
Trigger: ATCCCCTGACTGGATAACTCAGGGCTGGAGAAACAA...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTTGTTTCTCCAGCCCTaGGTTATCCAGTCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLLFLQP*VIQSGD
Trigger: ATCCCCTGACTGGATAACTCAGGGCTGGAGAAACAA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCTGTGTAACTCTGGATTaGAGGTCTTGTTGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFCVTLD*RSCWSL
Trigger: TAAAGACCAACAAGACCTTCAATCCAGAGTTACACA...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTGGCCAGAAGAAGAATaGAAATCTGCCTTCACGTCT +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIWPEEE*KSAFTS
Trigger: AGACGTGAAGGCAGATTTTCATTCTTCTTCTGGCCA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCTGGCCAGAAGAAGAATaGAAATCTGCCTTCACGTCT +
Preference number: 4 (lower is better)
Translates to: RASFSNRSCVCQCFISNCWPEEE*KSAFTS
Trigger: AGACGTGAAGGCAGATTTTCATTCTTCTTCTGGCCA...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCACATGTGTCTTGTACTaGGCTTTGGCCAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWITCVLY*ALARRR
Trigger: TCTTCTTCTGGCCAAAGCTCAGTACAAGACACATGT...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGTCTTCAGATTGCTGTTaGTCTTTTGGATCACATGAA +
Preference number: 4 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIESSDCC*SFGSHE
Trigger: TTCATGTGATCCAAAAGATCAACAGCAATCTGAAGA...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAAAACAGAACCTCATCTaGCTGTGTCCAGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTKQNLI*LCPALA
Trigger: AGCAAGTGCTGGACACAGTCAGATGAGGTTCTGTTT...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395001.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCACCGATGTAATTAAGTaGAAATATAGTTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSTDVIK*KYSSKA
Trigger: GGCTTTGGAACTATATTTGCACTTAATTACATCGGT...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTGTCTTGGGATAGTATaGCTTGAGGGGGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLCLGIV*LEGAGH
Trigger: ATGACCTGCCCCCTCAAGGCATACTATCCCAAGACA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCAGCATATCTAGGGATTaGATATCTTGGGATGTCATG +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFSISRD*ISWDVM
Trigger: CATGACATCCCAAGATATGCAATCCCTAGATATGCT...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTCAGGTAATATGGCATaGGCTGATAGAGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWSGNMA*ADRAWD
Trigger: ATCCCAAGCTCTATCAGCGCATGCCATATTACCTGA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCTTCTGGCCTTTGGCTTaGACGTCTAAAGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIFWPLA*TSKECL
Trigger: GAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAA...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCGAGATTGCCAGCCTTTaGTTTGCTGATCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISEIASL*FADLRN
Trigger: ATTCCTTAGATCAGCAAAGCAAAGGCTGGCAATCTC...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTGGTCTAAGGATTTCTaGTTTGGAGATTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWWSKDF*FGDCQP
Trigger: AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGAGCCAGTCTTTGATTTaGTGGTCTAAGGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKSQSLI*WSKDFC
Trigger: GCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGTGCTTATCTACGGAGTaGCTCTTTGGGGATAGCCAG +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLCLSTE*LFGDSQ
Trigger: CTGGCTATCCCCAAAGAGGCACTCCGTAGATAAGCA...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGTGCTCCTTATCAGTCTaGTGGTCTTTAACTTGTCCA +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKCSLSV*WSLTCP
Trigger: TGGACAAGTTAAAGACCAGCAGACTGATAAGGAGCA...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGTGCTTCTTTGAGTTTTaGTCCTTATCAGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKCFFEF*SLSVCW
Trigger: CCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCA...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTGCTTCTTTGAGTTTTaGTCCTTATCAGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISCFFEF*SLSVCW
Trigger: CCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp AGCCAGTCTTTGATTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTTGCCAGAATTGGTATTaGTGTATTTGGGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SQSLICWSKDFCFGDCQPCQNWY*CIWDSE
Trigger: TTCAGAATCCCAAATACAGCAATACCAATTCTGGCA...AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp TTGAGGCTTCAGGTAATATGGCATGCGCTGATAGAGCTTGGGATAGCATATCTTTTGCCTTTGTGGAATTaGCAGAATTGGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRLQVIWHALIELGIAYLLPLWN*QNWYCC
Trigger: ACAGCAATACCAATTCTGGCAATTCCACAAAGGCAA...AAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACCTGAAGCCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp GCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAATATGGGATGTTGAGGCTTTTGCCTTTGTGGAATTaGCAGAATTGGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: AEVGVVFQGTAQYGMLRLLPLWN*QNWYCC
Trigger: ACAGCAATACCAATTCTGGCAATTCCACAAAGGCAA...AAGCCTCAACATCCCATATTGTGCAGTTCCCTGAAATACAACACCTACTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp GTTGAAGATCTGGGGGCTGCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAAAATAGATCCTGTGTTTaGCAGTGCTTCATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: VEDLGAAEVGVVFQGTAQNRSCV*QCFISN
Trigger: ATTTGAAATGAAGCACTGGCAAACACAGGATCTATT...TTGTGCAGTTCCCTGAAATACAACACCTACTTCAGCAGCCCCCAGATCTTCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCAATAGATCCTGTGTTTaGCAGTGCTTCATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLINRSCV*QCFISN
Trigger: ATTTGAAATGAAGCACTGGCAAACACAGGATCTATT...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTAATAGATCCTGTGTTTaGCAGTGCTTCATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: SRLCWAVACWVWTSWYRANRSCV*QCFISN
Trigger: ATTTGAAATGAAGCACTGGCAAACACAGGATCTATT...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCTGGTATAGAGCTTTCTaGTTTAGGGCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFWYRAF*FRASFS
Trigger: AGAGAAAGAAGCCCTAAAGCAGAAAGCTCTATACCA...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGCTTGCTGATCTTCAGCTTGCTGATCTGGGAGTTGCTCTTTAGTTTGATTAAGTGGTATAGAGCTTTCTaGTTTAGGGCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GLLIFSLLIWELLFSLIKWYRAF*FRASFS
Trigger: AGAGAAAGAAGCCCTAAAGCAGAAAGCTCTATACCA...CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTTATGTTGGGCTGTTaGGTGCTGGGTTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLVMLGC*VLGLDF
Trigger: GAAGTCCAAACCCAGCACGCAACAGCCCAACATAAC...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGACCTTGACCAATAAGTaGTCCCCAGAATGGATATCC +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQTLTNK*SPEWIS
Trigger: GGATATCCATTCTGGGGAGCACTTATTGGTCAAGGT...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTAGCCCCCAAGACTCTTaGCTCTCCCTTCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGSPQDS*LSLQKI
Trigger: GATTTTCTGAAGGGAGAGCCAAGAGTCTTGGGGGCT...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGAAGTGCTCCCCAGAATaGATATCCTGTGAGGACAAC +
Preference number: 4 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMKCSPE*ISCEDN
Trigger: GTTGTCCTCACAGGATATCCATTCTGGGGAGCACTT...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAAAGTGCTCCCCAGAATaGATATCCTGTGAGGACAAC +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTKCSPE*ISCEDN
Trigger: GTTGTCCTCACAGGATATCCATTCTGGGGAGCACTT...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGAAGTGCTCCCCAGAATaGATATCCTGTGAGGACAAC +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWKCSPE*ISCEDN
Trigger: GTTGTCCTCACAGGATATCCATTCTGGGGAGCACTT...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTTGCTTTTGTTCATCTaGCACAAATTCTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELLLLFI*HKFSTF
Trigger: AAAGGTAGAGAATTTGTGCCAGATGAACAAAAGCAA...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTGGTCCTGCAGAAGCTTaGTTTGCATTTGAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LGDGRILCFCSSGTNSLPGPAEA*FAFEKV
Trigger: AACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACC...AGGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTTGGGATGGAAAAACTTaGAGTGACGCAGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGWDGKT*SDAAWS
Trigger: GGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTGGGATGGAAAAACTTaGAGTGACGCAGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLWDGKT*SDAAWS
Trigger: GGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GCTGATCCTGGGTTTGCTTCTTTGAGTTTTGCTCCTTATCAGTCTGCTGGTCTTGAAGACTGTTTGACATaGGATGATGTAGACTTAGAT +
Preference number: 4 (lower is better)
Translates to: ADPGFASLSFAPYQSAGLEDCLT*DDVDLD
Trigger: ATCTAAGTCTACATCATCCCATGTCAAACAGTCTTC...AAGACCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAGGATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp AGCCAGTCTTTGATTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTGAAGACTGTTTGACATaGGATGATGTAGACTTAGAT +
Preference number: 4 (lower is better)
Translates to: SQSLICWSKDFCFGDCQPEDCLT*DDVDLD
Trigger: ATCTAAGTCTACATCATCCCATGTCAAACAGTCTTC...AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TTTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTGCGCTGATAGAGCTTaGGATAGCATATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: FGRWKDTLLLFIWHKFSTCADRA*DSISWE
Trigger: TTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCA...GGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATTGCGCTGATAGAGCTTaGGATAGCATATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: FEDFWPLACTSKECLLKYCADRA*DSISWE
Trigger: TTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCA...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCAGGCTTCAGGTAATATaGCATGCGCTGATAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RASFSNRSCVCQCFISNCRLQVI*HALIEL
Trigger: AAGCTCTATCAGCGCATGCCATATTACCTGAAGCCT...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGAGGCTTCAGGTAATATaGCATGCGCTGATAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWRLQVI*HALIEL
Trigger: AAGCTCTATCAGCGCATGCCATATTACCTGAAGCCT...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTAGGCTTCAGGTAATATaGCATGCGCTGATAGAGCTT +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIRLQVI*HALIEL
Trigger: AAGCTCTATCAGCGCATGCCATATTACCTGAAGCCT...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGGGAACTGCACAATATaGGATGTTGAGGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWGNCTI*DVEASG
Trigger: ACCTGAAGCCTCAACATCCCATATTGTGCAGTTCCC...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGGGGAACTGCACAATATaGGATGTTGAGGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMGNCTI*DVEASG
Trigger: ACCTGAAGCCTCAACATCCCATATTGTGCAGTTCCC...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGAGGTTCAGTGTTTTCTaGTTGAAGATCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVRFSVF*LKIWGL
Trigger: CAGCCCCCAGATCTTCAACCAGAAAACACTGAACCT...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCAGGTTCAGTGTTTTCTaGTTGAAGATCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSRFSVF*LKIWGL
Trigger: CAGCCCCCAGATCTTCAACCAGAAAACACTGAACCT...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGAGGTTCAGTGTTTTCTaGTTGAAGATCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWRFSVF*LKIWGL
Trigger: CAGCCCCCAGATCTTCAACCAGAAAACACTGAACCT...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCGAGGATTTTCTTCTATaGAGTTCCTCCTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFEDFLL*SSSSDF
Trigger: GAAATCTGAGGAGGAACTCCATAGAAGAAAATCCTC...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGAAGGCTTTGGTTTGCTaGTTTAAGGAATGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: GLVGLYLECLDILGYVGLKALVC*FKECRL
Trigger: AAGACGGCATTCCTTAAACCAGCAAACCAAAGCCTT...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGAGTATTGCAAGGCTTTaGTTTGCTGGTTTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIESIARL*FAGLRN
Trigger: ATTCCTTAAACCAGCAAACCAAAGCCTTGCAATACT...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTAGGATTTCTGGCCTTTaGCTTGCACGTCTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPRISGL*LARLKN
Trigger: ATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCT...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTGGTATTGTTCCCCTTTaGCTTGCTGATCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIGIVPL*LADLQL
Trigger: AAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACC...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCGGTATTGTTCCCCTTTaGCTTGCTGATCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIGIVPL*LADLQL
Trigger: AAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACC...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTTTAGATTGTCCTTCTaGGTATTGTTCCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISFRLSF*VLFPFG
Trigger: GCCAAAGGGGAACAATACCCAGAAGGACAATCTAAA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCTCCTTATCAGTCTGCTaGTCTTTAACTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFSLSVC*SLTCPS
Trigger: AGATGGACAAGTTAAAGACCAGCAGACTGATAAGGA...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGATGGTATTGCTGTATTTaGGATTCTGAATCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRWYCCI*DSESWH
Trigger: ATGCCAAGATTCAGAATCCCAAATACAGCAATACCA...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGGTTGCGTGCTGGGTTTaGACTTCTTGGTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMVACWV*TSWYRA
Trigger: AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAAC...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCGTTGCGTGCTGGGTTTaGACTTCTTGGTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSVACWV*TSWYRA
Trigger: AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAAC...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTGGGCTGTTGCGTGCTaGGTTTGGACTTCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLWAVAC*VWTSWY
Trigger: ATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGCATTCTAGGTTATGTTaGGCTGTTGCGTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWHSRLC*AVACWV
Trigger: AACCCAGCACGCAACAGCCCAACATAACCTAGAATG...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGTTAATGGGGGCAGTGTaGTATTGGGTAGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQLMGAV*YWVDSA
Trigger: TGCAGAATCTACCCAATACCACACTGCCCCCATTAA...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR CAA 72 bp TCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATaGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SQFNSINGGSVV*GRFCMLVRVFR
Trigger: TCTGAAGACTCTGACTAACATGCAGAATCTACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
3UTR CAA 72 bp TTTGGCTTGCTGATCTTCAGCTTGCTGATCTGGGAGTaGCTCTTTAGTTTGATTAAGTTGAGCTTGCTTATC +
Preference number: 4 (lower is better)
Translates to: FGLLIFSLLIWE*LFSLIKLSLLI
Trigger: GATAAGCAAGCTCAACTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTTTATAGTGATGACGTaGGTTGCCCTTCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLFIVMT*VALLSW
Trigger: CCAGGACAGAAGGGCAACTCACGTCATCACTATAAA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGTTCCAAAGCCCACAATaGTTAGAGCAAGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWFQSPQ*LEQAGS
Trigger: AGATCCTGCTTGCTCTAATCATTGTGGGCTTTGGAA...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCCAAAGCCCACAATaGTTAGAGCAAGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTFQSPQ*LEQAGS
Trigger: AGATCCTGCTTGCTCTAATCATTGTGGGCTTTGGAA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTAGAATGGATATCCTGTaGGGACAACAAGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLRMDIL*GQQGEV
Trigger: GACTTCCCCTTGTTGTCCTCACAGGATATCCATTCT...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCTTGACCCAGAAGTTTTaGTTTCTTATCGGTTACTGT +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFLTQKF*FLIGYC
Trigger: ACAGTAACCGATAAGAAATCAAAACTTCTGGGTCAA...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300187.11
ENST00000525397.5
ENST00000531783.5
CDS-3UTR TCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGGGTTGTTCACTATTTTaGGTAACATCCGAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWGCSLF*VTSEGK
Trigger: CTTGCCTTCGGATGTTACTCAAAATAGTGAACAACC...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGCTTGCTGATCTTCAGCTTGCTGATCTGGGAGTTGCTCTTTAGTTTGATTAAGTTGTGCATTTGTTGTTaGATCATCACTGGAAAACTC +
Preference number: 4 (lower is better)
Translates to: GLLIFSLLIWELLFSLIKLCICC*IITGKL
Trigger: GAGTTTTCCAGTGATGATTCAACAACAAATGCACAA...CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTCTGTTTGACATGGGATaGTGTAGACTTAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFILFDMG*CRLRWH
Trigger: ATGCCATCTAAGTCTACATCATCCCATGTCAAACAG...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCCTGTTTGACATGGGATaGTGTAGACTTAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: RASFSNRSCVCQCFISNCLFDMG*CRLRWH
Trigger: ATGCCATCTAAGTCTACATCATCCCATGTCAAACAG...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTGGGATGGTGTGTCTTaGGATAGCATATCTAGGGAT +
Preference number: 4 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSWDGVS*DSISRD
Trigger: ATCCCTAGATATGCTATCTCAAGACACACCATCCCA...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTAGATCTGGGGGCTGCTaGAGTAGGTGTTGTATTTCA +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGRSGGC*SRCCIS
Trigger: TGAAATACAACACCTACTTCAGCAGCCCCCAGATCT...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGGGGATAGCCAGTCTTTaGTTTGCTGGTCTAAGGATT +
Preference number: 4 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVGIASL*FAGLRI
Trigger: AATCCTTAGACCAGCAAATCAAAGACTGGCTATCCC...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGGGATAGCCAGTCTTTaGTTTGCTGGTCTAAGGATT +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWGIASL*FAGLRI
Trigger: AATCCTTAGACCAGCAAATCAAAGACTGGCTATCCC...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TATCTTGGGATGTCATGTCATGAAACAGCATATCTTGAGATGATGTGTCTTGGGCTGGGTTTGCTTCTTTaGGTTTTGCTCCTTATCAGT +
Preference number: 4 (lower is better)
Translates to: YLGMSCHETAYLEMMCLGLGLLL*VLLLIS
Trigger: ACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAG...CCCAAGACACATCATCTCAAGATATGCTGTTTCATGACATGACATCCCAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATGGTCTTCAGTTTGCTaGTCCTGGGTTTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTWSSVC*SWVCFF
Trigger: AAAGAAGCAAACCCAGGATCAGCAAACTGAAGACCA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTGCTGTCCTTCGGCTTaGACATTTTGGAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSCCPSA*TFWNCP
Trigger: AGGACAATTCCAAAATGTTCAAGCCGAAGGACAGCA...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTGCTTCTGCCCTCCTTTaGAAGGAGTTTCTTTTACTT +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIASALL*KEFLLL
Trigger: AAGTAAAAGAAACTCCTTTCAAAGGAGGGCAGAAGC...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395001.5
CDS-3UTR GCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTAGAGTGAGCAAACATTaGCGCCCAAATCATGATCTA +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIRVSKH*RPNHDL
Trigger: TAGATCATGATTTGGGCGGCAATGTTTGCTCACTCT...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAACCGATGTAATTAAGTaGAAATATAGTTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRTDVIK*KYSSKA
Trigger: GGCTTTGGAACTATATTTGCACTTAATTACATCGGT...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAAAGAATAAAAATAAGTaGTCCCCAGAATGGATATCC +
Preference number: 4 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRKNKNK*SPEWIS
Trigger: GGATATCCATTCTGGGGAGCACTTATTTTTATTCTT...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300187.11
ENST00000525397.5
ENST00000531783.5
CDS-3UTR GCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTGCTGGTTTAAGGAATaGCGTCTTGAGGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISCWFKE*RLEDFL
Trigger: AAGAAAATCCTCAAGACGGCATTCCTTAAACCAGCA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCTGTCTCCTTAAGTATTaGAAGGCTTTGGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RASFSNRSCVCQCFISNCCLLKY*KALVCW
Trigger: CCAGCAAACCAAAGCCTTGCAATACTTAAGGAGACA...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGTTCTGGCCTTTGGCTTaGACGTCTAAAGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWFWPLA*TSKECL
Trigger: GAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAA...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTTCTGGCCTTTGGCTTaGACGTCTAAAGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVFWPLA*TSKECL
Trigger: GAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAA...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTAGCCAGTCTTTGATTTaGTGGTCTAAGGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFISQSLI*WSKDFC
Trigger: GCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCAGCCAGTCTTTGATTTaGTGGTCTAAGGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWISQSLI*WSKDFC
Trigger: GCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCTGCTCCTTATCAGTCTaGTGGTCTTTAACTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RASFSNRSCVCQCFISNCCSLSV*WSLTCP
Trigger: TGGACAAGTTAAAGACCAGCAGACTGATAAGGAGCA...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTTGCTCCTTATCAGTCTaGTGGTCTTTAACTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LGDGRILCFCSSGTNSLPCSLSV*WSLTCP
Trigger: TGGACAAGTTAAAGACCAGCAGACTGATAAGGAGCA...AGGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCTGCCAGAATTGGTATTaGTGTATTTGGGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFCQNWY*CIWDSE
Trigger: TTCAGAATCCCAAATACAGCAATACCAATTCTGGCA...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTAGGTCCCCTGAGGTTTaGCCTATACATTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGRSPEV*PIHFMS
Trigger: GGACATGAAATGTATAGGGCAAACCTCAGGGGACCT...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGACCTTGACCAATAAGTaGTCCCCAGAATGGATATCC +
Preference number: 4 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMTLTNK*SPEWIS
Trigger: GGATATCCATTCTGGGGAGCACTTATTGGTCAAGGT...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCGACTCCATGATTCTATaGCAGAACTCTAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIDSMIL*QNSSKG
Trigger: TCCCTTACTAGAGTTCTGCCATAGAATCATGGAGTC...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGATTGTTGAATCATCACTaGAAAACTCTTCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRLLNHH*KTLLEA
Trigger: TGCTTCAAGAAGAGTTTTCCAGTGATGATTCAACAA...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp AGCCAGTCTTTGATTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTTTGTTGAATCATCACTaGAAAACTCTTCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SQSLICWSKDFCFGDCQPLLNHH*KTLLEA
Trigger: TGCTTCAAGAAGAGTTTTCCAGTGATGATTCAACAA...AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTCCTTTATTACCTGGTTaGGAGACTAAAGGACTCCTA +
Preference number: 4 (lower is better)
Translates to: LGDGRILCFCSSGTNSLPPLLPG*ETKGLL
Trigger: TAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGG...AGGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCCCTTTATTACCTGGTTaGGAGACTAAAGGACTCCTA +
Preference number: 4 (lower is better)
Translates to: RASFSNRSCVCQCFISNCPLLPG*ETKGLL
Trigger: TAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGG...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GCTGATCCTGGGTTTGCTTCTTTGAGTTTTGCTCCTTATCAGTCTGCTGGTCTTTTGCTTTTGTTCATCTaGCACAAATTCTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: ADPGFASLSFAPYQSAGLLLLFI*HKFSTF
Trigger: AAAGGTAGAGAATTTGTGCCAGATGAACAAAAGCAA...AAGACCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAGGATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGCGCTGATAGAGCTTaGGATAGCATATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMCADRA*DSISWE
Trigger: TTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCA...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGTGCGCTGATAGAGCTTaGGATAGCATATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWCADRA*DSISWE
Trigger: TTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCA...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAAGGCTTCAGGTAATATaGCATGCGCTGATAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTRLQVI*HALIEL
Trigger: AAGCTCTATCAGCGCATGCCATATTACCTGAAGCCT...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTCACTATTTTGAGTAACATCCGAAGGCAAGAAAAACAGAACCTGGTGACGGTTAAGGCTTTGGTTTGCTaGTTTAAGGAATGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: FTILSNIRRQEKQNLVTVKALVC*FKECRL
Trigger: AAGACGGCATTCCTTAAACCAGCAAACCAAAGCCTT...AACCGTCACCAGGTTCTGTTTTTCTTGCCTTCGGATGTTACTCAAAATAGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525397.5
ENST00000527841.5
CDS-3UTR CCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTTCAGCTTGCTGATCTaGGAGTTGCTCTTTAGTTTG +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIFSLLI*ELLFSL
Trigger: CAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGTTTAGATTGTCCTTCTaGGTATTGTTCCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQFRLSF*VLFPFG
Trigger: GCCAAAGGGGAACAATACCCAGAAGGACAATCTAAA...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTTTAGATTGTCCTTCTaGGTATTGTTCCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: FGRWKDTLLLFIWHKFSTFRLSF*VLFPFG
Trigger: GCCAAAGGGGAACAATACCCAGAAGGACAATCTAAA...GGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTTTAGATTGTCCTTCTaGGTATTGTTCCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWFRLSF*VLFPFG
Trigger: GCCAAAGGGGAACAATACCCAGAAGGACAATCTAAA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGTGGGATTCTGAATCTTaGCATAACAGTTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKWDSES*HNSFGT
Trigger: AGTGCCAAAACTGTTATGCCAAGATTCAGAATCCCA...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTGGGATTCTGAATCTTaGCATAACAGTTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISWDSES*HNSFGT
Trigger: AGTGCCAAAACTGTTATGCCAAGATTCAGAATCCCA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTGGAGATTGCCTTTGTaGAATTGCCAGAATTGGTAT +
Preference number: 4 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISWRLPL*NCQNWY
Trigger: ATACCAATTCTGGCAATTCCACAAAGGCAATCTCCA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGCATTCTAGGTTATGTTaGGCTGTTGCGTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLHSRLC*AVACWV
Trigger: AACCCAGCACGCAACAGCCCAACATAACCTAGAATG...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTCATTCTAGGTTATGTTaGGCTGTTGCGTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGHSRLC*AVACWV
Trigger: AACCCAGCACGCAACAGCCCAACATAACCTAGAATG...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCACATTTCATGTCCCCTaGTTTGATGTCTCTAGTGTA +
Preference number: 4 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISTFHVP*FDVSSV
Trigger: TACACTAGAGACATCAAACCAGGGGACATGAAATGT...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTACATTTCATGTCCCCTaGTTTGATGTCTCTAGTGTA +
Preference number: 4 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPTFHVP*FDVSSV
Trigger: TACACTAGAGACATCAAACCAGGGGACATGAAATGT...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp AGATTAGAAGACTGTTTGACATGGGATGATGTAGACTTAGATGGCATGGTTTGTTTAATGGGGGCAGTGTaGTATTGGGTAGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: RLEDCLTWDDVDLDGMVCLMGAV*YWVDSA
Trigger: TGCAGAATCTACCCAATACCACACTGCCCCCATTAA...ACAAACCATGCCATCTAAGTCTACATCATCCCATGTCAAACAGTCTTCTAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp GGCTTGCTGATCTTCAGCTTGCTGATCTGGGAGTTGCTCTTTAGTTTGATTAAGGTTGAGAACACAGATTaGAGGAGGCAATATTGTTTT +
Preference number: 4 (lower is better)
Translates to: GLLIFSLLIWELLFSLIKVENTD*RRQYCF
Trigger: AAAACAATATTGCCTCCTCCAATCTGTGTTCTCAAC...CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCGTTGAGAACACAGATTaGAGGAGGCAATATTGTTTT +
Preference number: 4 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFVENTD*RRQYCF
Trigger: AAAACAATATTGCCTCCTCCAATCTGTGTTCTCAAC...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGGGATGTTGACTCCATaGTTCTATGGCAGAACTCTA +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLGMLTP*FYGRTL
Trigger: TAGAGTTCTGCCATAGAATCATGGAGTCAACATCCC...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR TCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTTTGACCCAGAAGTTTTaGTTTCTTATCGGTTACTGT +
Preference number: 4 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPLTQKF*FLIGYC
Trigger: ACAGTAACCGATAAGAAATCAAAACTTCTGGGTCAA...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300187.11
ENST00000525397.5
ENST00000531783.5
CDS-3UTR TCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGGTTGTTCACTATTTTaGGTAACATCCGAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWGCSLF*VTSEGK
Trigger: CTTGCCTTCGGATGTTACTCAAAATAGTGAACAACC...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGGTTGTTCACTATTTTaGGTAACATCCGAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGAGCSLF*VTSEGK
Trigger: CTTGCCTTCGGATGTTACTCAAAATAGTGAACAACC...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTTGTGCATTTGTTGTTaGATCATCACTGGAAAACTC +
Preference number: 4 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISLCICC*IITGKL
Trigger: GAGTTTTCCAGTGATGATTCAACAACAAATGCACAA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGTTCAATTTCTTCCTCTaGAAATTTGGGAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKFNFFL*KFGRWK
Trigger: CTTCCATCTCCCAAATTTTCAGAGGAAGAAATTGAA...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACACTGTTTGACATGGGATaGTGTAGACTTAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTLFDMG*CRLRWH
Trigger: ATGCCATCTAAGTCTACATCATCCCATGTCAAACAG...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTGGGATGGTGTGTCTTaGGATAGCATATCTAGGGAT +
Preference number: 4 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLWDGVS*DSISRD
Trigger: ATCCCTAGATATGCTATCTCAAGACACACCATCCCA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTGGTCTTCAGTTTGCTaGTCCTGGGTTTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLWSSVC*SWVCFF
Trigger: AAAGAAGCAAACCCAGGATCAGCAAACTGAAGACCA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTGGTCTTCAGTTTGCTaGTCCTGGGTTTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLWSSVC*SWVCFF
Trigger: AAAGAAGCAAACCCAGGATCAGCAAACTGAAGACCA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTGCTGTCCTTCGGCTTaGACATTTTGGAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLCCPSA*TFWNCP
Trigger: AGGACAATTCCAAAATGTTCAAGCCGAAGGACAGCA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTGGCCAGAAGAAGAATaGAAATCTGCCTTCACGTCT +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLWPEEE*KSAFTS
Trigger: AGACGTGAAGGCAGATTTTCATTCTTCTTCTGGCCA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTTGGCCAGAAGAAGAATaGAAATCTGCCTTCACGTCT +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGWPEEE*KSAFTS
Trigger: AGACGTGAAGGCAGATTTTCATTCTTCTTCTGGCCA...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAAGAGTGAGCAAACATTaGCGCCCAAATCATGATCTA +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTRVSKH*RPNHDL
Trigger: TAGATCATGATTTGGGCGGCAATGTTTGCTCACTCT...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTAGGTCTGTAGGGAAATaGAGTCAATACAGTTTCGTT +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIRSVGK*SQYSFV
Trigger: AACGAAACTGTATTGACTGCATTTCCCTACAGACCT...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCAGGTCTGTAGGGAAATaGAGTCAATACAGTTTCGTT +
Preference number: 4 (lower is better)
Translates to: RASFSNRSCVCQCFISNCRSVGK*SQYSFV
Trigger: AACGAAACTGTATTGACTGCATTTCCCTACAGACCT...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAGGTCTGTAGGGAAATaGAGTCAATACAGTTTCGTT +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQRSVGK*SQYSFV
Trigger: AACGAAACTGTATTGACTGCATTTCCCTACAGACCT...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGTCAGGTAATATGGCATaGGCTGATAGAGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLSGNMA*ADRAWD
Trigger: ATCCCAAGCTCTATCAGCGCATGCCATATTACCTGA...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCTGTATTTCAGGGAACTaGACAATATGGGATGTTGAG +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWICISGN*TIWDVE
Trigger: CTCAACATCCCATATTGTGCAGTTCCCTGAAATACA...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATTGCTGGTTTAAGGAATaGCGTCTTGAGGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: FEDFWPLACTSKECLLKYCWFKE*RLEDFL
Trigger: AAGAAAATCCTCAAGACGGCATTCCTTAAACCAGCA...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTGCTGGTTTAAGGAATaGCGTCTTGAGGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFICWFKE*RLEDFL
Trigger: AAGAAAATCCTCAAGACGGCATTCCTTAAACCAGCA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTTCTGGCCTTTGGCTTaGACGTCTAAAGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLFWPLA*TSKECL
Trigger: GAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGAGATTGCCAGCCTTTaGTTTGCTGATCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGAEIASL*FADLRN
Trigger: ATTCCTTAGATCAGCAAAGCAAAGGCTGGCAATCTC...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGGAGATTGCCAGCCTTTaGTTTGCTGATCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMEIASL*FADLRN
Trigger: ATTCCTTAGATCAGCAAAGCAAAGGCTGGCAATCTC...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCGAGATTGCCAGCCTTTaGTTTGCTGATCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSEIASL*FADLRN
Trigger: ATTCCTTAGATCAGCAAAGCAAAGGCTGGCAATCTC...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGTGGTCTAAGGATTTCTaGTTTGGAGATTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLWSKDF*FGDCQP
Trigger: AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCA...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTGGTCTAAGGATTTCTaGTTTGGAGATTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLWSKDF*FGDCQP
Trigger: AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAAGCCAGTCTTTGATTTaGTGGTCTAAGGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGASQSLI*WSKDFC
Trigger: GCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTGCTCCTTATCAGTCTaGTGGTCTTTAACTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSCSLSV*WSLTCP
Trigger: TGGACAAGTTAAAGACCAGCAGACTGATAAGGAGCA...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATGCTCCTTATCAGTCTaGTGGTCTTTAACTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTCSLSV*WSLTCP
Trigger: TGGACAAGTTAAAGACCAGCAGACTGATAAGGAGCA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCATGCTTCTTTGAGTTTTaGTCCTTATCAGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGACFFEF*SLSVCW
Trigger: CCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCA...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCTTGCCTTTGTGGAATTaGCAGAATTGGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWILPLWN*QNWYCC
Trigger: ACAGCAATACCAATTCTGGCAATTCCACAAAGGCAA...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTTGCCTTTGTGGAATTaGCAGAATTGGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFILPLWN*QNWYCC
Trigger: ACAGCAATACCAATTCTGGCAATTCCACAAAGGCAA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTCTTGCTTCTAAAGGATaGAATAGTCACAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: LGDGRILCFCSSGTNSLPLASKG*NSHRDA
Trigger: AGCATCTCTGTGACTATTGCATCCTTTAGAAGCAAG...AGGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530662.5
CDS-3UTR CCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGACTCCATGATTCTATaGCAGAACTCTAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWDSMIL*QNSSKG
Trigger: TCCCTTACTAGAGTTCTGCCATAGAATCATGGAGTC...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTTTGATCATTTTCTTCTaGGGCAGGTTGTTCACTATT +
Preference number: 4 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPLIIFF*GRLFTI
Trigger: AATAGTGAACAACCTGCCCCAGAAGAAAATGATCAA...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACACCTTTATTACCTGGTTaGGAGACTAAAGGACTCCTA +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTPLLPG*ETKGLL
Trigger: TAGGAGTCCTTTAGTCTCCCAACCAGGTAATAAAGG...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGGTCCTGCAGAAGCTTaGTTTGCATTTGAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLGPAEA*FAFEKV
Trigger: AACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACC...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGGGTCCTGCAGAAGCTTaGTTTGCATTTGAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLGPAEA*FAFEKV
Trigger: AACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACC...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTTGCGCTGATAGAGCTTaGGATAGCATATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGCADRA*DSISWE
Trigger: TTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCA...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAAAGGCTTTGGTTTGCTaGTTTAAGGAATGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTKALVC*FKECRL
Trigger: AAGACGGCATTCCTTAAACCAGCAAACCAAAGCCTT...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGAAGGCTTTGGTTTGCTaGTTTAAGGAATGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWKALVC*FKECRL
Trigger: AAGACGGCATTCCTTAAACCAGCAAACCAAAGCCTT...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTAGTATTGCAAGGCTTTaGTTTGCTGGTTTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPSIARL*FAGLRN
Trigger: ATTCCTTAAACCAGCAAACCAAAGCCTTGCAATACT...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAAGGATTTCTGGCCTTTaGCTTGCACGTCTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGARISGL*LARLKN
Trigger: ATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCT...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGAGGATTTCTGGCCTTTaGCTTGCACGTCTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMRISGL*LARLKN
Trigger: ATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCT...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTTCAGCTTGCTGATCTaGGAGTTGCTCTTTAGTTTG +
Preference number: 4 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVFSLLI*ELLFSL
Trigger: CAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAA...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCATTCAGCTTGCTGATCTaGGAGTTGCTCTTTAGTTTG +
Preference number: 4 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGAFSLLI*ELLFSL
Trigger: CAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAA...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCTCCTTATCAGTCTGCTaGTCTTTAACTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWISLSVC*SLTCPS
Trigger: AGATGGACAAGTTAAAGACCAGCAGACTGATAAGGA...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTTGAGGATTTCTGGCCTTTGGCTTGCACGTCTAAAGAATGTCTCCTTAAGTATTCCTTATCAGTCTGCTaGTCTTTAACTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: FEDFWPLACTSKECLLKYSLSVC*SLTCPS
Trigger: AGATGGACAAGTTAAAGACCAGCAGACTGATAAGGA...ATACTTAAGGAGACATTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTCCTTATCAGTCTGCTaGTCTTTAACTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWSLSVC*SLTCPS
Trigger: AGATGGACAAGTTAAAGACCAGCAGACTGATAAGGA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCCTTATCAGTCTGCTaGTCTTTAACTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFISLSVC*SLTCPS
Trigger: AGATGGACAAGTTAAAGACCAGCAGACTGATAAGGA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTGGGATTCTGAATCTTaGCATAACAGTTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWWDSES*HNSFGT
Trigger: AGTGCCAAAACTGTTATGCCAAGATTCAGAATCCCA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTTGGGATTCTGAATCTTaGCATAACAGTTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: LGDGRILCFCSSGTNSLPWDSES*HNSFGT
Trigger: AGTGCCAAAACTGTTATGCCAAGATTCAGAATCCCA...AGGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CCA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCTGGGATTCTGAATCTTaGCATAACAGTTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: RASFSNRSCVCQCFISNCWDSES*HNSFGT
Trigger: AGTGCCAAAACTGTTATGCCAAGATTCAGAATCCCA...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCTGGAGATTGCCTTTGTaGAATTGCCAGAATTGGTAT +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIWRLPL*NCQNWY
Trigger: ATACCAATTCTGGCAATTCCACAAAGGCAATCTCCA...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTGGAGATTGCCTTTGTaGAATTGCCAGAATTGGTAT +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWWRLPL*NCQNWY
Trigger: ATACCAATTCTGGCAATTCCACAAAGGCAATCTCCA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCTGGAGATTGCCTTTGTaGAATTGCCAGAATTGGTAT +
Preference number: 4 (lower is better)
Translates to: RASFSNRSCVCQCFISNCWRLPL*NCQNWY
Trigger: ATACCAATTCTGGCAATTCCACAAAGGCAATCTCCA...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGACATTTCATGTCCCCTaGTTTGATGTCTCTAGTGTA +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQTFHVP*FDVSSV
Trigger: TACACTAGAGACATCAAACCAGGGGACATGAAATGT...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGTTAATGGGGGCAGTGTaGTATTGGGTAGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLLMGAV*YWVDSA
Trigger: TGCAGAATCTACCCAATACCACACTGCCCCCATTAA...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGGTTGAGAACACAGATTaGAGGAGGCAATATTGTTTT +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKVENTD*RRQYCF
Trigger: AAAACAATATTGCCTCCTCCAATCTGTGTTCTCAAC...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCGTTGAGAACACAGATTaGAGGAGGCAATATTGTTTT +
Preference number: 4 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISVENTD*RRQYCF
Trigger: AAAACAATATTGCCTCCTCCAATCTGTGTTCTCAAC...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGTTCAATTTCTTCCTCTaGAAATTTGGGAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQFNFFL*KFGRWK
Trigger: CTTCCATCTCCCAAATTTTCAGAGGAAGAAATTGAA...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCTTCAATTTCTTCCTCTaGAAATTTGGGAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIFNFFL*KFGRWK
Trigger: CTTCCATCTCCCAAATTTTCAGAGGAAGAAATTGAA...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTCTGTTTGACATGGGATaGTGTAGACTTAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGLFDMG*CRLRWH
Trigger: ATGCCATCTAAGTCTACATCATCCCATGTCAAACAG...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGCTGTTTGACATGGGATaGTGTAGACTTAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLLFDMG*CRLRWH
Trigger: ATGCCATCTAAGTCTACATCATCCCATGTCAAACAG...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGCTGGGTTTGCTTCTTTaGGTTTTGCTCCTTATCAGT +
Preference number: 4 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLLGLLL*VLLLIS
Trigger: ACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAG...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGCTGGGTTTGCTTCTTTaGGTTTTGCTCCTTATCAGT +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLLGLLL*VLLLIS
Trigger: ACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAG...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTCTTCAGATTGCTGTTaGTCTTTTGGATCACATGAA +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWSSDCC*SFGSHE
Trigger: TTCATGTGATCCAAAAGATCAACAGCAATCTGAAGA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGTCTTCAGATTGCTGTTaGTCTTTTGGATCACATGAA +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQSSDCC*SFGSHE
Trigger: TTCATGTGATCCAAAAGATCAACAGCAATCTGAAGA...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGAGGTCTGTAGGGAAATaGAGTCAATACAGTTTCGTT +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWRSVGK*SQYSFV
Trigger: AACGAAACTGTATTGACTGCATTTCCCTACAGACCT...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp TACAATGATGATGGTAGTGCAGTGACCAAATGGAGTTGCTTCTTTTGCCGTGAAACCGATGTAATTAAGTaGAAATATAGTTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: YNDDGSAVTKWSCFFCRETDVIK*KYSSKA
Trigger: GGCTTTGGAACTATATTTGCACTTAATTACATCGGT...TTCACGGCAAAAGAAGCAACTCCATTTGGTCACTGCACTACCATCATCATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS-3UTR GCA 90 bp AGATTAGAAGACTGTTTGACATGGGATGATGTAGACTTAGATGGCATGGTTTGTAGCATATCTAGGGATTaGATATCTTGGGATGTCATG +
Preference number: 4 (lower is better)
Translates to: RLEDCLTWDDVDLDGMVCSISRD*ISWDVM
Trigger: CATGACATCCCAAGATATGCAATCCCTAGATATGCT...ACAAACCATGCCATCTAAGTCTACATCATCCCATGTCAAACAGTCTTCTAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTGTATTTCAGGGAACTaGACAATATGGGATGTTGAG +
Preference number: 4 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSCISGN*TIWDVE
Trigger: CTCAACATCCCATATTGTGCAGTTCCCTGAAATACA...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATGTATTTCAGGGAACTaGACAATATGGGATGTTGAG +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTCISGN*TIWDVE
Trigger: CTCAACATCCCATATTGTGCAGTTCCCTGAAATACA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTATTTCAGGGAACTaGACAATATGGGATGTTGAG +
Preference number: 4 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMCISGN*TIWDVE
Trigger: CTCAACATCCCATATTGTGCAGTTCCCTGAAATACA...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGGAGATTGCCAGCCTTTaGTTTGCTGATCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLEIASL*FADLRN
Trigger: ATTCCTTAGATCAGCAAAGCAAAGGCTGGCAATCTC...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCCAGTCTTTGATTTaGTGGTCTAAGGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLSQSLI*WSKDFC
Trigger: GCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTAGCCAGTCTTTGATTTaGTGGTCTAAGGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLSQSLI*WSKDFC
Trigger: GCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTTGCTTCTTTGAGTTTTaGTCCTTATCAGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGCFFEF*SLSVCW
Trigger: CCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCA...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGAATAGATCCTGTGTTTaGCAGTGCTTCATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKNRSCV*QCFISN
Trigger: ATTTGAAATGAAGCACTGGCAAACACAGGATCTATT...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATAGAGCTTTCTaGTTTAGGGCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVWYRAF*FRASFS
Trigger: AGAGAAAGAAGCCCTAAAGCAGAAAGCTCTATACCA...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCCTTGCTTCTAAAGGATaGAATAGTCACAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSLASKG*NSHRDA
Trigger: AGCATCTCTGTGACTATTGCATCCTTTAGAAGCAAG...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395001.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGCTTGCTTCTAAAGGATaGAATAGTCACAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWLASKG*NSHRDA
Trigger: AGCATCTCTGTGACTATTGCATCCTTTAGAAGCAAG...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395001.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCTTGATCATTTTCTTCTaGGGCAGGTTGTTCACTATT +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWILIIFF*GRLFTI
Trigger: AATAGTGAACAACCTGCCCCAGAAGAAAATGATCAA...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTTGTTGAATCATCACTaGAAAACTCTTCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISLLNHH*KTLLEA
Trigger: TGCTTCAAGAAGAGTTTTCCAGTGATGATTCAACAA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGTTGTTGAATCATCACTaGAAAACTCTTCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKLLNHH*KTLLEA
Trigger: TGCTTCAAGAAGAGTTTTCCAGTGATGATTCAACAA...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGTTGCTTTTGTTCATCTaGCACAAATTCTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKLLLFI*HKFSTF
Trigger: AAAGGTAGAGAATTTGTGCCAGATGAACAAAAGCAA...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGGAAGACTGTTTGACATaGGATGATGTAGACTTAGAT +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQEDCLT*DDVDLD
Trigger: ATCTAAGTCTACATCATCCCATGTCAAACAGTCTTC...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGGAAGACTGTTTGACATaGGATGATGTAGACTTAGAT +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWEDCLT*DDVDLD
Trigger: ATCTAAGTCTACATCATCCCATGTCAAACAGTCTTC...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAGAGGATTTTCTTCTATaGAGTTCCTCCTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTEDFLL*SSSSDF
Trigger: GAAATCTGAGGAGGAACTCCATAGAAGAAAATCCTC...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAAGGCTTTGGTTTGCTaGTTTAAGGAATGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLKALVC*FKECRL
Trigger: AAGACGGCATTCCTTAAACCAGCAAACCAAAGCCTT...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTAAGGCTTTGGTTTGCTaGTTTAAGGAATGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGKALVC*FKECRL
Trigger: AAGACGGCATTCCTTAAACCAGCAAACCAAAGCCTT...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTTCAGCTTGCTGATCTaGGAGTTGCTCTTTAGTTTG +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLFSLLI*ELLFSL
Trigger: CAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTTTAGATTGTCCTTCTaGGTATTGTTCCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLFRLSF*VLFPFG
Trigger: GCCAAAGGGGAACAATACCCAGAAGGACAATCTAAA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGTTTAGATTGTCCTTCTaGGTATTGTTCCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLFRLSF*VLFPFG
Trigger: GCCAAAGGGGAACAATACCCAGAAGGACAATCTAAA...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTGGTATTGCTGTATTTaGGATTCTGAATCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWWYCCI*DSESWH
Trigger: ATGCCAAGATTCAGAATCCCAAATACAGCAATACCA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp AGATTAGAAGACTGTTTGACATGGGATGATGTAGACTTAGATGGCATGGTTTGTTGGAGATTGCCTTTGTaGAATTGCCAGAATTGGTAT +
Preference number: 4 (lower is better)
Translates to: RLEDCLTWDDVDLDGMVCWRLPL*NCQNWY
Trigger: ATACCAATTCTGGCAATTCCACAAAGGCAATCTCCA...ACAAACCATGCCATCTAAGTCTACATCATCCCATGTCAAACAGTCTTCTAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR TCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTGTGCATTTGTTGTTaGATCATCACTGGAAAACTC +
Preference number: 4 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSLCICC*IITGKL
Trigger: GAGTTTTCCAGTGATGATTCAACAACAAATGCACAA...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTGTGCATTTGTTGTTaGATCATCACTGGAAAACTC +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTLCICC*IITGKL
Trigger: GAGTTTTCCAGTGATGATTCAACAACAAATGCACAA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCATTCAATTTCTTCCTCTaGAAATTTGGGAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGAFNFFL*KFGRWK
Trigger: CTTCCATCTCCCAAATTTTCAGAGGAAGAAATTGAA...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATCTTCAGATTGCTGTTaGTCTTTTGGATCACATGAA +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTSSDCC*SFGSHE
Trigger: TTCATGTGATCCAAAAGATCAACAGCAATCTGAAGA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCATCTTCAGATTGCTGTTaGTCTTTTGGATCACATGAA +
Preference number: 4 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGASSDCC*SFGSHE
Trigger: TTCATGTGATCCAAAAGATCAACAGCAATCTGAAGA...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGTCTTCAGATTGCTGTTaGTCTTTTGGATCACATGAA +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWSSDCC*SFGSHE
Trigger: TTCATGTGATCCAAAAGATCAACAGCAATCTGAAGA...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCACTGTGTAGAAGGTGTTaGCATGCACTAACATTTATT +
Preference number: 4 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGALCRRC*HALTFI
Trigger: AATAAATGTTAGTGCATGTCAACACCTTCTACACAG...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395001.5
CDS-3UTR GCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGAGGTCTGTAGGGAAATaGAGTCAATACAGTTTCGTT +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLRSVGK*SQYSFV
Trigger: AACGAAACTGTATTGACTGCATTTCCCTACAGACCT...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGACCGATGTAATTAAGTaGAAATATAGTTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWTDVIK*KYSSKA
Trigger: GGCTTTGGAACTATATTTGCACTTAATTACATCGGT...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGTGTATTTCAGGGAACTaGACAATATGGGATGTTGAG +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLCISGN*TIWDVE
Trigger: CTCAACATCCCATATTGTGCAGTTCCCTGAAATACA...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTGCTGGTTTAAGGAATaGCGTCTTGAGGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLCWFKE*RLEDFL
Trigger: AAGAAAATCCTCAAGACGGCATTCCTTAAACCAGCA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTGCTGGTTTAAGGAATaGCGTCTTGAGGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLCWFKE*RLEDFL
Trigger: AAGAAAATCCTCAAGACGGCATTCCTTAAACCAGCA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGTGCTGGTTTAAGGAATaGCGTCTTGAGGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLCWFKE*RLEDFL
Trigger: AAGAAAATCCTCAAGACGGCATTCCTTAAACCAGCA...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTAATAGATCCTGTGTTTaGCAGTGCTTCATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: FCFRASFSNRSCVCQCFINRSCV*QCFISN
Trigger: ATTTGAAATGAAGCACTGGCAAACACAGGATCTATT...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCAATAGATCCTGTGTTTaGCAGTGCTTCATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: FGRWKDTLLLFIWHKFSTNRSCV*QCFISN
Trigger: ATTTGAAATGAAGCACTGGCAAACACAGGATCTATT...GGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTGGTATAGAGCTTTCTaGTTTAGGGCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLWYRAF*FRASFS
Trigger: AGAGAAAGAAGCCCTAAAGCAGAAAGCTCTATACCA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTTGGTATAGAGCTTTCTaGTTTAGGGCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGWYRAF*FRASFS
Trigger: AGAGAAAGAAGCCCTAAAGCAGAAAGCTCTATACCA...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTGGTATAGAGCTTTCTaGTTTAGGGCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLWYRAF*FRASFS
Trigger: AGAGAAAGAAGCCCTAAAGCAGAAAGCTCTATACCA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTTGATCATTTTCTTCTaGGGCAGGTTGTTCACTATT +
Preference number: 4 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMLIIFF*GRLFTI
Trigger: AATAGTGAACAACCTGCCCCAGAAGAAAATGATCAA...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTTGTTGAATCATCACTaGAAAACTCTTCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWLLNHH*KTLLEA
Trigger: TGCTTCAAGAAGAGTTTTCCAGTGATGATTCAACAA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCTTGCTTTTGTTCATCTaGCACAAATTCTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWILLLFI*HKFSTF
Trigger: AAAGGTAGAGAATTTGTGCCAGATGAACAAAAGCAA...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGTTGCTTTTGTTCATCTaGCACAAATTCTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQLLLFI*HKFSTF
Trigger: AAAGGTAGAGAATTTGTGCCAGATGAACAAAAGCAA...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGGAAGACTGTTTGACATaGGATGATGTAGACTTAGAT +
Preference number: 4 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVEDCLT*DDVDLD
Trigger: ATCTAAGTCTACATCATCCCATGTCAAACAGTCTTC...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAGAAGACTGTTTGACATaGGATGATGTAGACTTAGAT +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTEDCLT*DDVDLD
Trigger: ATCTAAGTCTACATCATCCCATGTCAAACAGTCTTC...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGAGGATTTTCTTCTATaGAGTTCCTCCTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLEDFLL*SSSSDF
Trigger: GAAATCTGAGGAGGAACTCCATAGAAGAAAATCCTC...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGGAGGATTTTCTTCTATaGAGTTCCTCCTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLEDFLL*SSSSDF
Trigger: GAAATCTGAGGAGGAACTCCATAGAAGAAAATCCTC...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCAGTATTGCAAGGCTTTaGTTTGCTGGTTTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSSIARL*FAGLRN
Trigger: ATTCCTTAAACCAGCAAACCAAAGCCTTGCAATACT...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAAGTATTGCAAGGCTTTaGTTTGCTGGTTTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTSIARL*FAGLRN
Trigger: ATTCCTTAAACCAGCAAACCAAAGCCTTGCAATACT...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGCTGTATTTaGGATTCTGAATCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVWYCCI*DSESWH
Trigger: ATGCCAAGATTCAGAATCCCAAATACAGCAATACCA...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGATATTCCTTATGTTCTaGGAACTGTGTAGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWIFLMF*ELCRRC
Trigger: ACACCTTCTACACAGTTCCCAGAACATAAGGAATAT...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395001.5
CDS-3UTR TCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGTTGTGCATTTGTTGTTaGATCATCACTGGAAAACTC +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLLCICC*IITGKL
Trigger: GAGTTTTCCAGTGATGATTCAACAACAAATGCACAA...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTTTCAATTTCTTCCTCTaGAAATTTGGGAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGFNFFL*KFGRWK
Trigger: CTTCCATCTCCCAAATTTTCAGAGGAAGAAATTGAA...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR TCA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAATGTAGAGTCTAGCTaGATGGACATATTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLNVESS*MDIFSE
Trigger: CTCAGAAAATATGTCCATTCAGCTAGACTCTACATT...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAACCGATGTAATTAAGTaGAAATATAGTTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGATDVIK*KYSSKA
Trigger: GGCTTTGGAACTATATTTGCACTTAATTACATCGGT...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR GCA 90 bp TCATGTCATGAAACAGCATATCTTGAGATGATGTGTCTTGGGATAGTATGCCTTACCGATGTAATTAAGTaGAAATATAGTTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SCHETAYLEMMCLGIVCLTDVIK*KYSSKA
Trigger: GGCTTTGGAACTATATTTGCACTTAATTACATCGGT...AAGGCATACTATCCCAAGACACATCATCTCAAGATATGCTGTTTCATGACATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp AGATTAGAAGACTGTTTGACATGGGATGATGTAGACTTAGATGGCATGGTTTGTACCGATGTAATTAAGTaGAAATATAGTTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: RLEDCLTWDDVDLDGMVCTDVIK*KYSSKA
Trigger: GGCTTTGGAACTATATTTGCACTTAATTACATCGGT...ACAAACCATGCCATCTAAGTCTACATCATCCCATGTCAAACAGTCTTCTAATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR GCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTTGCCAGAATTGGTATTaGTGTATTTGGGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGCQNWY*CIWDSE
Trigger: TTCAGAATCCCAAATACAGCAATACCAATTCTGGCA...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTGCCAGAATTGGTATTaGTGTATTTGGGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLCQNWY*CIWDSE
Trigger: TTCAGAATCCCAAATACAGCAATACCAATTCTGGCA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTGAAGACTGTTTGACATaGGATGATGTAGACTTAGAT +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGEDCLT*DDVDLD
Trigger: ATCTAAGTCTACATCATCCCATGTCAAACAGTCTTC...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTAGTATTGCAAGGCTTTaGTTTGCTGGTTTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGSIARL*FAGLRN
Trigger: ATTCCTTAAACCAGCAAACCAAAGCCTTGCAATACT...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGAGTATTGCAAGGCTTTaGTTTGCTGGTTTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLSIARL*FAGLRN
Trigger: ATTCCTTAAACCAGCAAACCAAAGCCTTGCAATACT...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR GCA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGAATAGATCCTGTGTTTaGCAGTGCTTCATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLNRSCV*QCFISN
Trigger: ATTTGAAATGAAGCACTGGCAAACACAGGATCTATT...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CCA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTTGTTGAATCATCACTaGAAAACTCTTCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLLLNHH*KTLLEA
Trigger: TGCTTCAAGAAGAGTTTTCCAGTGATGATTCAACAA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS GCA 90 bp CATGCCCGTGACACCTTGACCCTGTTCTCGCAGCCTGGTCCTGTGTaGTGTGGCTGGGGATCAGCTCACCTCTGGGGAGCGCTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HARDTLTLFSQPGPV*CGWGSAHLWGALSW
Trigger: CCAGCTGAGCGCTCCCCAGAGGTGAGCTGATCCCCAGCCACAGCACACAGGACCAGGCTGCGAGAACAGGGTCAAGGTGTCACGGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531787.5
CDS CCA 90 bp GACACCTTGACCCTGTTCTCGCAGCCTGGTCCTGTGTGCTGTGGCTaGGGATCAGCTCACCTCTGGGGAGCGCTCAGCTGGAACCTCCCA +
Preference number: 5 (lower is better)
Translates to: DTLTLFSQPGPVCCG*GSAHLWGALSWNLP
Trigger: TGGGAGGTTCCAGCTGAGCGCTCCCCAGAGGTGAGCTGATCCCCAGCCACAGCACACAGGACCAGGCTGCGAGAACAGGGTCAAGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCACGGGGATTTCTTCTCTaGGGCCGGCTGGTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: LPSRLLIAGPLRFALYISRGFLL*GRLVFS
Trigger: ACTGAAGACCAGCCGGCCCAAGAGAAGAAATCCCCG...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGGAAGGTATGTCTTGAGGTGGCATGGCGTGGGATGGTGTGTCTTGAGATAGCATGTCCAGCCTGGAGATaGCCTTTGTGGAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: GKVCLEVAWRGMVCLEIACPAWR*PLWNCQ
Trigger: CTGGCAATTCCACAAAGGCAATCTCCAGGCTGGACA...TGCTATCTCAAGACACACCATCCCACGCCATGCCACCTCAAGACATACCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTCGGGGATTTCTTCTCTaGGGCCGGCTGGTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: LLRAGFGLLGIELSALGLRGFLL*GRLVFS
Trigger: ACTGAAGACCAGCCGGCCCAAGAGAAGAAATCCCCG...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGGAAGGTATGTCTTGAGGTGGCATGGCGTGGGATGGTGTGTCTTGAGATAGCAGCCTGGAGATTGCCTTaGTGGAATTGCCAGAATTGG +
Preference number: 5 (lower is better)
Translates to: GKVCLEVAWRGMVCLEIAAWRLP*WNCQNW
Trigger: CCAATTCTGGCAATTCCACAAAGGCAATCTCCAGGC...TGCTATCTCAAGACACACCATCCCACGCCATGCCACCTCAAGACATACCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGTGTCCAGCCTGGAGATaGCCTTTGTGGAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: RLLIAGPLRFALYISCPLCPAWR*PLWNCQ
Trigger: CTGGCAATTCCACAAAGGCAATCTCCAGGCTGGACA...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGGAAGGTATGTCTTGAGGTGGCATGGCGTGGGATGGTGTGTCTTGAGATAGCATTTCTGCTTTGGAGATaGCCAGCCTTTGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: GKVCLEVAWRGMVCLEIAFLLWR*PAFALL
Trigger: CAGCAAAGCAAAGGCTGGCAATCTCCAAAGCAGAAA...TGCTATCTCAAGACACACCATCCCACGCCATGCCACCTCAAGACATACCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGTTGCTGATCTTCAGCTaGCTGATCTGGGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: RLLIAGPLRFALYISCPLLLIFS*LIWELL
Trigger: GAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAA...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGCATAACAGTTTTGGCACTTTCTCCACCTGAGCTTGCTGTCCTTCGGCTTGAATTTCTCCACCTGAGCTaGCTGTCCTTCGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: GITVLALSPPELAVLRLEFLHLS*LSFGLN
Trigger: GTTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAA...TTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCCAAAACTGTTATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCAGCCTGGAGATaGCCTTTGTGGAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: LPSRLLIAGPLRFALYISCPAWR*PLWNCQ
Trigger: CTGGCAATTCCACAAAGGCAATCTCCAGGCTGGACA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTATTGACAGTCCTGGGTaGTCCAGCCTGGAGATTGCC +
Preference number: 5 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAIDSPG*SSLEIA
Trigger: GGCAATCTCCAGGCTGGACAACCCAGGACTGTCAAT...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTGGTTATGTTGGGCTGTaGCGTGCTGGGTTTGGACTT +
Preference number: 5 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGGYVGL*RAGFGL
Trigger: AAGTCCAAACCCAGCACGCAACAGCCCAACATAACC...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGGTTATGTTGGGCTGTaGCGTGCTGGGTTTGGACTT +
Preference number: 5 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRGYVGL*RAGFGL
Trigger: AAGTCCAAACCCAGCACGCAACAGCCCAACATAACC...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATTCAGTGTTTTCTGGTaGAAGATCTGGGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LPSRLLIAGPLRFALYISFSVFW*KIWGLL
Trigger: CAGCAGCCCCCAGATCTTCAACCAGAAAACACTGAA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGCTAAGGATTTCTGCTTaGGAGATTGCCAGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: RLLIAGPLRFALYISCPLLRISA*EIASLC
Trigger: GCAAAGGCTGGCAATCTCCAAAGCAGAAATCCTTAG...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTTGCTGATCTTCAGCTaGCTGATCTGGGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGLLIFS*LIWELL
Trigger: GAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTCGGCTGGTCTTCAGTTaGCTGATCCTGGGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSRLVFS*LILGLL
Trigger: AAGCAAACCCAGGATCAGCAAACTGAAGACCAGCCG...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTTTCTCCACCTGAGCTaGCTGTCCTTCGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSFLHLS*LSFGLN
Trigger: GTTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGCTTGGCATAACAGTTTaGGCACTTTCTCCACCTGAG +
Preference number: 5 (lower is better)
Translates to: RLLIAGPLRFALYISCPLLGITV*ALSPPE
Trigger: CTCAGGTGGAGAAAGTGCCAAAACTGTTATGCCAAG...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGGGCCTGGAGATTGCCTTaGTGGAATTGCCAGAATTGG +
Preference number: 5 (lower is better)
Translates to: SFWVLFPFGLLIFSLLIWAWRLP*WNCQNW
Trigger: CCAATTCTGGCAATTCCACAAAGGCAATCTCCAGGC...CCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGATTGACAGTCCTGGGTaGTCCAGCCTGGAGATTGCC +
Preference number: 5 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIEIDSPG*SSLEIA
Trigger: GGCAATCTCCAGGCTGGACAACCCAGGACTGTCAAT...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTGGGGGCAGTGTGGTATaGGGTAGATTCTGCATGTTA +
Preference number: 5 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGGGSVV*GRFCML
Trigger: TAACATGCAGAATCTACCCAATACCACACTGCCCCC...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGGGGGCAGTGTGGTATaGGGTAGATTCTGCATGTTA +
Preference number: 5 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRGGSVV*GRFCML
Trigger: TAACATGCAGAATCTACCCAATACCACACTGCCCCC...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AATGATGATGGTAGTGCAGTGACCAAATGGAGTTGCTTCTTTTGCCGTGAAGGGAGGGAGCTGCCTTTTTaGGTCTCCTGGAGGGCCATA +
Preference number: 5 (lower is better)
Translates to: NDDGSAVTKWSCFFCREGRELPF*VSWRAI
Trigger: TATGGCCCTCCAGGAGACCAAAAAAGGCAGCTCCCT...CCCTTCACGGCAAAAGAAGCAACTCCATTTGGTCACTGCACTACCATCATCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531949.1
CDS TCA 90 bp AACTCTAGTAAGGGAAAGAGTGAGCAAACATTGCCGCCCAAATCATaGTCTACCTCTCCACCAGAGTCACATGGAGCCCTCAGAGATGAG +
Preference number: 5 (lower is better)
Translates to: NSSKGKSEQTLPPKS*STSPPESHGALRDE
Trigger: CTCATCTCTGAGGGCTCCATGTGACTCTGGTGGAGAGGTAGATCATGATTTGGGCGGCAATGTTTGCTCACTCTTTCCCTTACTAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000526375.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGCTGGCAGTACTTGTCTaGATGTCTGTAGCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: RLLIAGPLRFALYISCPLLAVLV*MSVAEN
Trigger: ATTCTCAGCTACAGACATCAAGACAAGTACTGCCAG...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGGGATGGAAAAACTTGGAGTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCCTGGCAGTACTTGTCTaGATGTCTGTAGCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: WDGKTWSDAAWSCRSLVCLAVLV*MSVAEN
Trigger: ATTCTCAGCTACAGACATCAAGACAAGTACTGCCAG...GCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTTCAGTGTTTTCTGGTaGAAGATCTGGGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELFSVFW*KIWGLL
Trigger: CAGCAGCCCCCAGATCTTCAACCAGAAAACACTGAA...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTCTAAGGAATGCCTCTTaGAGGATTTCTGGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGLRNAS*RISGLW
Trigger: CCAAAGGCCAGAAATCCTCAAAGAGGCATTCCTTAG...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTTTCTGCTTTGGAGATaGCCAGCCTTTGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGFLLWR*PAFALL
Trigger: CAGCAAAGCAAAGGCTGGCAATCTCCAAAGCAGAAA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCACTAAGGATTTCTGCTTaGGAGATTGCCAGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: LPSRLLIAGPLRFALYISLRISA*EIASLC
Trigger: GCAAAGGCTGGCAATCTCCAAAGCAGAAATCCTTAG...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTTGCTGATCTTCAGCTaGCTGATCTGGGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSLLIFS*LIWELL
Trigger: GAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTTTGCTGATCTTCAGCTaGCTGATCTGGGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCLLIFS*LIWELL
Trigger: GAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAA...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCGGCTGGTCTTCAGTTaGCTGATCCTGGGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIERLVFS*LILGLL
Trigger: AAGCAAACCCAGGATCAGCAAACTGAAGACCAGCCG...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGGAAGGTATGTCTTGAGGTGGCATGGCGTGGGATGGTGTGTCTTGAGATAGCAATTGCCTTTGTGGAATaGCCAGAATTGGTATTGCTG +
Preference number: 5 (lower is better)
Translates to: GKVCLEVAWRGMVCLEIAIAFVE*PELVLL
Trigger: CAGCAATACCAATTCTGGCAATTCCACAAAGGCAAT...TGCTATCTCAAGACACACCATCCCACGCCATGCCACCTCAAGACATACCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTGCCTGGAGATTGCCTTaGTGGAATTGCCAGAATTGG +
Preference number: 5 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAAWRLP*WNCQNW
Trigger: CCAATTCTGGCAATTCCACAAAGGCAATCTCCAGGC...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGAGGCTTCAGGTAATATGGCATGCGCTGATAGAGCTTGGGATAGCATATCTTATTGACAGTCCTGGGTaGTCCAGCCTGGAGATTGCC +
Preference number: 5 (lower is better)
Translates to: LRLQVIWHALIELGIAYLIDSPG*SSLEIA
Trigger: GGCAATCTCCAGGCTGGACAACCCAGGACTGTCAAT...AAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACCTGAAGCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTGGTTCTTGGCCAAAAGATaGACAGTCCTGGGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: SFWVLFPFGLLIFSLLIWFLAKR*TVLGCP
Trigger: TGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAA...CCAGATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGTTCTTGGCCAAAAGATaGACAGTCCTGGGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRFLAKR*TVLGCP
Trigger: TGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAA...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTTCTTGGCCAAAAGATaGACAGTCCTGGGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGFLAKR*TVLGCP
Trigger: TGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GTTGAAGATCTGGGGGCTGCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAACCAGTCAGGGGATTCTaGGCCAAAAGATTGACAGTC +
Preference number: 5 (lower is better)
Translates to: VEDLGAAEVGVVFQGTAQPVRGF*AKRLTV
Trigger: GACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGG...TTGTGCAGTTCCCTGAAATACAACACCTACTTCAGCAGCCCCCAGATCTTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp AGATTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGCCAGTCAGGGGATTCTaGGCCAAAAGATTGACAGTC +
Preference number: 5 (lower is better)
Translates to: RLSFWVLFPFGLLIFSLLPVRGF*AKRLTV
Trigger: GACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGG...CAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGACTGTGTCCAGCACTaGCTTCTAAAGGATGCAATA +
Preference number: 5 (lower is better)
Translates to: RLLIAGPLRFALYISCPLDCVQH*LLKDAI
Trigger: TATTGCATCCTTTAGAAGCAAGTGCTGGACACAGTC...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395001.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CAA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGCATGCCCGTGACACCTaGACCCTGTTCTCGCAGCCT +
Preference number: 5 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQHARDT*TLFSQP
Trigger: AGGCTGCGAGAACAGGGTCAAGGTGTCACGGGCATG...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531787.5
CDS-3UTR CAA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGTTCAGTGTTTTCTGGTaGAAGATCTGGGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIEFSVFW*KIWGLL
Trigger: CAGCAGCCCCCAGATCTTCAACCAGAAAACACTGAA...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGAGGATTTCTGGCCTTaGGCTTGCACGTCTAAAGAA +
Preference number: 5 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSEDFWP*ACTSKE
Trigger: TTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTC...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTGTGGAATTGGAGGATTTCTGGCCTTaGGCTTGCACGTCTAAAGAA +
Preference number: 5 (lower is better)
Translates to: QKIDSPGLSSLEIAFVELEDFWP*ACTSKE
Trigger: TTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTC...CAATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTCTAAGGAATGCCTCTTaGAGGATTTCTGGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: SRLCWAVACWVWTSWYRALRNAS*RISGLW
Trigger: CCAAAGGCCAGAAATCCTCAAAGAGGCATTCCTTAG...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCATTTGAGAAGGTTGTACAACTAAGGAATGCCTCTTaGAGGATTTCTGGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: VTQLGPAEAWFAFEKVVQLRNAS*RISGLW
Trigger: CCAAAGGCCAGAAATCCTCAAAGAGGCATTCCTTAG...TTGTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTTTCTGCTTTGGAGATaGCCAGCCTTTGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSFLLWR*PAFALL
Trigger: CAGCAAAGCAAAGGCTGGCAATCTCCAAAGCAGAAA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GTTGAAGATCTGGGGGCTGCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAATTTCTGCTTTGGAGATaGCCAGCCTTTGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: VEDLGAAEVGVVFQGTAQFLLWR*PAFALL
Trigger: CAGCAAAGCAAAGGCTGGCAATCTCCAAAGCAGAAA...TTGTGCAGTTCCCTGAAATACAACACCTACTTCAGCAGCCCCCAGATCTTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTTTTCTGCTTTGGAGATaGCCAGCCTTTGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LLRAGFGLLGIELSALGLFLLWR*PAFALL
Trigger: CAGCAAAGCAAAGGCTGGCAATCTCCAAAGCAGAAA...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCTAAGGATTTCTGCTTaGGAGATTGCCAGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSLRISA*EIASLC
Trigger: GCAAAGGCTGGCAATCTCCAAAGCAGAAATCCTTAG...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCCTAAGGATTTCTGCTTaGGAGATTGCCAGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLILRISA*EIASLC
Trigger: GCAAAGGCTGGCAATCTCCAAAGCAGAAATCCTTAG...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TGGGATGGAAAAACTTGGAGTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCCTGCTGGTCTTTAACTaGTCCATCTTTAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: WDGKTWSDAAWSCRSLVCLLVFN*SIFRLS
Trigger: GGACAATCTAAAGATGGACAAGTTAAAGACCAGCAG...GCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCACTCCAAGTTTTTCCATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCCGGCTGGTCTTCAGTTaGCTGATCCTGGGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFRLVFS*LILGLL
Trigger: AAGCAAACCCAGGATCAGCAAACTGAAGACCAGCCG...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCCGGGGATTTCTTCTCTaGGGCCGGCTGGTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: RASFSNRSCVCQCFISNCRGFLL*GRLVFS
Trigger: ACTGAAGACCAGCCGGCCCAAGAGAAGAAATCCCCG...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTCGGGGATTTCTTCTCTaGGGCCGGCTGGTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIRGFLL*GRLVFS
Trigger: ACTGAAGACCAGCCGGCCCAAGAGAAGAAATCCCCG...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCCGGGGATTTCTTCTCTaGGGCCGGCTGGTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIRGFLL*GRLVFS
Trigger: ACTGAAGACCAGCCGGCCCAAGAGAAGAAATCCCCG...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTCGGGGATTTCTTCTCTaGGGCCGGCTGGTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: LGDGRILCFCSSGTNSLPRGFLL*GRLVFS
Trigger: ACTGAAGACCAGCCGGCCCAAGAGAAGAAATCCCCG...AGGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGTTGCTGTCCTTCGGCTaGAACATTTTGGAATTGTCC +
Preference number: 5 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRLLSFG*NILELS
Trigger: GGACAATTCCAAAATGTTCAAGCCGAAGGACAGCAA...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTAGCTGAATGGACATATTTTCTGAGGGCTTTTTCTCTAGTGTGGGAGGCAAAGTTTCTCCACCTGAGCTaGCTGTCCTTCGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LAEWTYFLRAFSLVWEAKFLHLS*LSFGLN
Trigger: GTTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAA...CTTTGCCTCCCACACTAGAGAAAAAGCCCTCAGAAAATATGTCCATTCAGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp AGATTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGCTTGGCATAACAGTTTaGGCACTTTCTCCACCTGAG +
Preference number: 5 (lower is better)
Translates to: RLSFWVLFPFGLLIFSLLLGITV*ALSPPE
Trigger: CTCAGGTGGAGAAAGTGCCAAAACTGTTATGCCAAG...CAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGTGGAATTGCCAGAATaGGTATTGCTGTATTTGGGA +
Preference number: 5 (lower is better)
Translates to: QGILGQKIDSPGLSSLEIVELPE*VLLYLG
Trigger: TCCCAAATACAGCAATACCAATTCTGGCAATTCCAC...AATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCCTGGAGATTGCCTTaGTGGAATTGCCAGAATTGG +
Preference number: 5 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRAWRLP*WNCQNW
Trigger: CCAATTCTGGCAATTCCACAAAGGCAATCTCCAGGC...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGGCCTGGAGATTGCCTTaGTGGAATTGCCAGAATTGG +
Preference number: 5 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIEAWRLP*WNCQNW
Trigger: CCAATTCTGGCAATTCCACAAAGGCAATCTCCAGGC...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAATATGGGATGTTGAGGCTTTGTCCAGCCTGGAGATaGCCTTTGTGGAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: AEVGVVFQGTAQYGMLRLCPAWR*PLWNCQ
Trigger: CTGGCAATTCCACAAAGGCAATCTCCAGGCTGGACA...AAGCCTCAACATCCCATATTGTGCAGTTCCCTGAAATACAACACCTACTTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp GTTGAAGATCTGGGGGCTGCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAATTCTTGGCCAAAAGATaGACAGTCCTGGGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: VEDLGAAEVGVVFQGTAQFLAKR*TVLGCP
Trigger: TGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAA...TTGTGCAGTTCCCTGAAATACAACACCTACTTCAGCAGCCCCCAGATCTTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTTTCTTGGCCAAAAGATaGACAGTCCTGGGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: LLRAGFGLLGIELSALGLFLAKR*TVLGCP
Trigger: TGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAA...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGCCAGTCTTTGATTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTGGGGGCAGTGTGGTATaGGGTAGATTCTGCATGTTA +
Preference number: 5 (lower is better)
Translates to: SQSLICWSKDFCFGDCQPGGSVV*GRFCML
Trigger: TAACATGCAGAATCTACCCAATACCACACTGCCCCC...AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGCCTGCCAGAACGATCTaGGTGCTCTGCTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMPARTI*VLCSPA
Trigger: GGCTGGAGAGCAGAGCACCAAGATCGTTCTGGCAGG...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531787.5
CDS-3UTR CAA 90 bp CAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGCCTTTGTGGAATTGCTGGCAGTACTTGTCTaGATGTCTGTAGCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: QKIDSPGLSSLEIAFVELLAVLV*MSVAEN
Trigger: ATTCTCAGCTACAGACATCAAGACAAGTACTGCCAG...CAATTCCACAAAGGCAATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTCTGGCAGTACTTGTCTaGATGTCTGTAGCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSLAVLV*MSVAEN
Trigger: ATTCTCAGCTACAGACATCAAGACAAGTACTGCCAG...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTTCTTCTGGGGCAGGTaGTTCACTATTTTGAGTAAC +
Preference number: 5 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGFFWGR*FTILSN
Trigger: GTTACTCAAAATAGTGAACAACCTGCCCCAGAAGAA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCTGCAGAAGCTTGGTTaGCATTTGAGAAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSLQKLG*HLRRLY
Trigger: GTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAG...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGAGATTAGAAGACTGTTaGACATGGGATGATGTAGAC +
Preference number: 5 (lower is better)
Translates to: RLLIAGPLRFALYISCPLRLEDC*TWDDVD
Trigger: GTCTACATCATCCCATGTCAAACAGTCTTCTAATCT...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTGCACAATATGGGATGTaGAGGCTTCAGGTAATATGG +
Preference number: 5 (lower is better)
Translates to: LLRAGFGLLGIELSALGLAQYGM*RLQVIW
Trigger: CCATATTACCTGAAGCCTCAACATCCCATATTGTGC...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCACAATATGGGATGTaGAGGCTTCAGGTAATATGG +
Preference number: 5 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSAQYGM*RLQVIW
Trigger: CCATATTACCTGAAGCCTCAACATCCCATATTGTGC...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCTTCAGTGTTTTCTGGTaGAAGATCTGGGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFFSVFW*KIWGLL
Trigger: CAGCAGCCCCCAGATCTTCAACCAGAAAACACTGAA...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGTTAAGGAATGCCGTCTaGAGGATTTTCTTCTATGGA +
Preference number: 5 (lower is better)
Translates to: RLLIAGPLRFALYISCPLLRNAV*RIFFYG
Trigger: TCCATAGAAGAAAATCCTCAAGACGGCATTCCTTAA...CAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGAGGATTTCTGGCCTTaGGCTTGCACGTCTAAAGAA +
Preference number: 5 (lower is better)
Translates to: HSRLCWAVACWVWTSWYREDFWP*ACTSKE
Trigger: TTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTC...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTTGATTAAGTTGAGCTaGCTTATCTACGGAGTGCCT +
Preference number: 5 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGLIKLS*LIYGVP
Trigger: AGGCACTCCGTAGATAAGCAAGCTCAACTTAATCAA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGCTTGCTGATCTTCAGCTTGCTGATCTGGGAGTTGCTCTTTAGTTTGATTAAGTTGCTGATCTTCAGCTaGCTGATCTGGGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: GLLIFSLLIWELLFSLIKLLIFS*LIWELL
Trigger: GAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAA...CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp GCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAATATGGGATGTTGAGGCTTTTGCTGATCTTCAGCTaGCTGATCTGGGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: AEVGVVFQGTAQYGMLRLLLIFS*LIWELL
Trigger: GAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAA...AAGCCTCAACATCCCATATTGTGCAGTTCCCTGAAATACAACACCTACTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTTTGTCCATCTTTAGATaGTCCTTCTGGGTATTGTTC +
Preference number: 5 (lower is better)
Translates to: QGILGQKIDSPGLSSLEILSIFR*SFWVLF
Trigger: GAACAATACCCAGAAGGACAATCTAAAGATGGACAA...AATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCACTGCTGGTCTTTAACTaGTCCATCTTTAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: LPSRLLIAGPLRFALYISLLVFN*SIFRLS
Trigger: GGACAATCTAAAGATGGACAAGTTAAAGACCAGCAG...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGCGGCTGGTCTTCAGTTaGCTGATCCTGGGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKRLVFS*LILGLL
Trigger: AAGCAAACCCAGGATCAGCAAACTGAAGACCAGCCG...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCCGGGGATTTCTTCTCTaGGGCCGGCTGGTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSRGFLL*GRLVFS
Trigger: ACTGAAGACCAGCCGGCCCAAGAGAAGAAATCCCCG...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCGGCTTGAACATTTaGGAATTGTCCTTTCGGGGA +
Preference number: 5 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAFGLNI*ELSFRG
Trigger: TCCCCGAAAGGACAATTCCAAAATGTTCAAGCCGAA...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTTCGGCTTGAACATTTaGGAATTGTCCTTTCGGGGA +
Preference number: 5 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELFGLNI*ELSFRG
Trigger: TCCCCGAAAGGACAATTCCAAAATGTTCAAGCCGAA...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTTCGGCTTGAACATTTaGGAATTGTCCTTTCGGGGA +
Preference number: 5 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSFGLNI*ELSFRG
Trigger: TCCCCGAAAGGACAATTCCAAAATGTTCAAGCCGAA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGTTTCTCCACCTGAGCTaGCTGTCCTTCGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKFLHLS*LSFGLN
Trigger: GTTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAA...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGACTTGGCATAACAGTTTaGGCACTTTCTCCACCTGAG +
Preference number: 5 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRLGITV*ALSPPE
Trigger: CTCAGGTGGAGAAAGTGCCAAAACTGTTATGCCAAG...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTGTGGAATTGCCAGAATaGGTATTGCTGTATTTGGGA +
Preference number: 5 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGVELPE*VLLYLG
Trigger: TCCCAAATACAGCAATACCAATTCTGGCAATTCCAC...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGTGGAATTGCCAGAATaGGTATTGCTGTATTTGGGA +
Preference number: 5 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRVELPE*VLLYLG
Trigger: TCCCAAATACAGCAATACCAATTCTGGCAATTCCAC...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCAATTGCCTTTGTGGAATaGCCAGAATTGGTATTGCTG +
Preference number: 5 (lower is better)
Translates to: LPSRLLIAGPLRFALYISIAFVE*PELVLL
Trigger: CAGCAATACCAATTCTGGCAATTCCACAAAGGCAAT...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGATTGCCTTTGTGGAATaGCCAGAATTGGTATTGCTG +
Preference number: 5 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRIAFVE*PELVLL
Trigger: CAGCAATACCAATTCTGGCAATTCCACAAAGGCAAT...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGTGTCCAGCCTGGAGATaGCCTTTGTGGAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: GLVGLYLECLDILGYVGLCPAWR*PLWNCQ
Trigger: CTGGCAATTCCACAAAGGCAATCTCCAGGCTGGACA...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCATTGACAGTCCTGGGTaGTCCAGCCTGGAGATTGCC +
Preference number: 5 (lower is better)
Translates to: RASFSNRSCVCQCFISNCIDSPG*SSLEIA
Trigger: GGCAATCTCCAGGCTGGACAACCCAGGACTGTCAAT...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTATTGACAGTCCTGGGTaGTCCAGCCTGGAGATTGCC +
Preference number: 5 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIIDSPG*SSLEIA
Trigger: GGCAATCTCCAGGCTGGACAACCCAGGACTGTCAAT...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATTGACAGTCCTGGGTaGTCCAGCCTGGAGATTGCC +
Preference number: 5 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWIDSPG*SSLEIA
Trigger: GGCAATCTCCAGGCTGGACAACCCAGGACTGTCAAT...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGATTCTTGGCCAAAAGATaGACAGTCCTGGGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRFLAKR*TVLGCP
Trigger: TGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAA...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTGGTTATGTTGGGCTGTaGCGTGCTGGGTTTGGACTT +
Preference number: 5 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPGYVGL*RAGFGL
Trigger: AAGTCCAAACCCAGCACGCAACAGCCCAACATAACC...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGCATAACAGTTTTGGCACTTTCTCCACCTGAGCTTGCTGTCCTTCGGCTTGAAGGATTGAAGGTCTTGTaGGTCTTTATCTTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: GITVLALSPPELAVLRLEGLKVL*VFILSV
Trigger: GACACTCAAGATAAAGACCAACAAGACCTTCAATCC...TTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAAGTGCCAAAACTGTTATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGTCAGAGTCTTCAGATaGCTGTTGATCTTTTGGATC +
Preference number: 5 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRVRVFR*LLIFWI
Trigger: GATCCAAAAGATCAACAGCAATCTGAAGACTCTGAC...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTCGCTTCTGCCCTCCTTaGAAAGGAGTTTCTTTTACT +
Preference number: 5 (lower is better)
Translates to: SRLCWAVACWVWTSWYRARFCPP*KGVSFT
Trigger: AGTAAAAGAAACTCCTTTCAAAGGAGGGCAGAAGCG...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395001.5
CDS-3UTR CAA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTAACAAGGGGAAGTCTTaGGGAGAAACCGATGTAATT +
Preference number: 5 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELNKGKS*GETDVI
Trigger: AATTACATCGGTTTCTCCCAAAGACTTCCCCTTGTT...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CAA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTAACAAGGGGAAGTCTTaGGGAGAAACCGATGTAATT +
Preference number: 5 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSNKGKS*GETDVI
Trigger: AATTACATCGGTTTCTCCCAAAGACTTCCCCTTGTT...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CAA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTCTGGGGCAGGTaGTTCACTATTTTGAGTAAC +
Preference number: 5 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAFFWGR*FTILSN
Trigger: GTTACTCAAAATAGTGAACAACCTGCCCCAGAAGAA...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCTTCTTCTGGGGCAGGTaGTTCACTATTTTGAGTAAC +
Preference number: 5 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSFFWGR*FTILSN
Trigger: GTTACTCAAAATAGTGAACAACCTGCCCCAGAAGAA...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTAGATGGAAGGATACTTaGCTTTTGTTCATCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LLRAGFGLLGIELSALGLRWKDT*LLFIWH
Trigger: GTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCT...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTAGATGGAAGGATACTTaGCTTTTGTTCATCTGGCAC +
Preference number: 5 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSRWKDT*LLFIWH
Trigger: GTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCT...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGACTGCAGAAGCTTGGTTaGCATTTGAGAAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRLQKLG*HLRRLY
Trigger: GTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAG...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGAGATTAGAAGACTGTTaGACATGGGATGATGTAGAC +
Preference number: 5 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRRLEDC*TWDDVD
Trigger: GTCTACATCATCCCATGTCAAACAGTCTTCTAATCT...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCACAATATGGGATGTaGAGGCTTCAGGTAATATGG +
Preference number: 5 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRAQYGM*RLQVIW
Trigger: CCATATTACCTGAAGCCTCAACATCCCATATTGTGC...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCCTAAGGAATGCCTCTTaGAGGATTTCTGGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFLRNAS*RISGLW
Trigger: CCAAAGGCCAGAAATCCTCAAAGAGGCATTCCTTAG...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTTGATTAAGTTGAGCTaGCTTATCTACGGAGTGCCT +
Preference number: 5 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELLIKLS*LIYGVP
Trigger: AGGCACTCCGTAGATAAGCAAGCTCAACTTAATCAA...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATTGTCCATCTTTAGATaGTCCTTCTGGGTATTGTTC +
Preference number: 5 (lower is better)
Translates to: LPSRLLIAGPLRFALYISLSIFR*SFWVLF
Trigger: GAACAATACCCAGAAGGACAATCTAAAGATGGACAA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGCGGCTGGTCTTCAGTTaGCTGATCCTGGGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWRLVFS*LILGLL
Trigger: AAGCAAACCCAGGATCAGCAAACTGAAGACCAGCCG...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCCGGCTGGTCTTCAGTTaGCTGATCCTGGGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: FGRWKDTLLLFIWHKFSTRLVFS*LILGLL
Trigger: AAGCAAACCCAGGATCAGCAAACTGAAGACCAGCCG...GGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCCGGCTGGTCTTCAGTTaGCTGATCCTGGGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: RASFSNRSCVCQCFISNCRLVFS*LILGLL
Trigger: AAGCAAACCCAGGATCAGCAAACTGAAGACCAGCCG...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTCGGGGATTTCTTCTCTaGGGCCGGCTGGTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLRGFLL*GRLVFS
Trigger: ACTGAAGACCAGCCGGCCCAAGAGAAGAAATCCCCG...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGTTGCTGTCCTTCGGCTaGAACATTTTGGAATTGTCC +
Preference number: 5 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIELLSFG*NILELS
Trigger: GGACAATTCCAAAATGTTCAAGCCGAAGGACAGCAA...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGATTGCTGTCCTTCGGCTaGAACATTTTGGAATTGTCC +
Preference number: 5 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRLLSFG*NILELS
Trigger: GGACAATTCCAAAATGTTCAAGCCGAAGGACAGCAA...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCTTTCTCCACCTGAGCTaGCTGTCCTTCGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIFLHLS*LSFGLN
Trigger: GTTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAA...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTTTCTCCACCTGAGCTaGCTGTCCTTCGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWFLHLS*LSFGLN
Trigger: GTTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCCTTGGCATAACAGTTTaGGCACTTTCTCCACCTGAG +
Preference number: 5 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFLGITV*ALSPPE
Trigger: CTCAGGTGGAGAAAGTGCCAAAACTGTTATGCCAAG...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCGTGGAATTGCCAGAATaGGTATTGCTGTATTTGGGA +
Preference number: 5 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSVELPE*VLLYLG
Trigger: TCCCAAATACAGCAATACCAATTCTGGCAATTCCAC...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GTTGAAGATCTGGGGGCTGCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAAGTGGAATTGCCAGAATaGGTATTGCTGTATTTGGGA +
Preference number: 5 (lower is better)
Translates to: VEDLGAAEVGVVFQGTAQVELPE*VLLYLG
Trigger: TCCCAAATACAGCAATACCAATTCTGGCAATTCCAC...TTGTGCAGTTCCCTGAAATACAACACCTACTTCAGCAGCCCCCAGATCTTCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGGCCTGGAGATTGCCTTaGTGGAATTGCCAGAATTGG +
Preference number: 5 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKAWRLP*WNCQNW
Trigger: CCAATTCTGGCAATTCCACAAAGGCAATCTCCAGGC...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTGTCCAGCCTGGAGATaGCCTTTGTGGAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWCPAWR*PLWNCQ
Trigger: CTGGCAATTCCACAAAGGCAATCTCCAGGCTGGACA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTCCAGTCAGGGGATTCTaGGCCAAAAGATTGACAGTC +
Preference number: 5 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPPVRGF*AKRLTV
Trigger: GACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGG...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTCCAGCCTGGAGATTGTGCTTCATTTCAAATaGCCATTCTCGTGCTTTATA +
Preference number: 5 (lower is better)
Translates to: QGILGQKIDSPGLSSLEIVLHFK*PFSCFI
Trigger: TATAAAGCACGAGAATGGCAATTTGAAATGAAGCAC...AATCTCCAGGCTGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGGGTTATGTTGGGCTGTaGCGTGCTGGGTTTGGACTT +
Preference number: 5 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQGYVGL*RAGFGL
Trigger: AAGTCCAAACCCAGCACGCAACAGCCCAACATAACC...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTGGATTGAAGGTCTTGTaGGTCTTTATCTTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCGLKVL*VFILSV
Trigger: GACACTCAAGATAAAGACCAACAAGACCTTCAATCC...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGTCTGGATTGAAGGTCTaGTTGGTCTTTATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRSGLKV*LVFILS
Trigger: ACTCAAGATAAAGACCAACAAGACCTTCAATCCAGA...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCCCTGGTTTGTGTAACTCTGGATaGAAGGTCTTGTTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: SSDCRSPEVCPIHFMSPGLCNSG*KVLLVF
Trigger: AAAGACCAACAAGACCTTCAATCCAGAGTTACACAA...ACCAGGGGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATTGTGTAACTCTGGATaGAAGGTCTTGTTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: LPSRLLIAGPLRFALYISLCNSG*KVLLVF
Trigger: AAAGACCAACAAGACCTTCAATCCAGAGTTACACAA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCGTCAGAGTCTTCAGATaGCTGTTGATCTTTTGGATC +
Preference number: 5 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSVRVFR*LLIFWI
Trigger: GATCCAAAAGATCAACAGCAATCTGAAGACTCTGAC...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGGGGGGCAGTGTGGTATaGGGTAGATTCTGCATGTTA +
Preference number: 5 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKGGSVV*GRFCML
Trigger: TAACATGCAGAATCTACCCAATACCACACTGCCCCC...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTGTAAGAACAAATTGTTaGAGTGCTCAGCATGCCCTT +
Preference number: 5 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAVRTNC*SAQHAL
Trigger: AAGGGCATGCTGAGCACTCAAACAATTTGTTCTTAC...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTGTAAGAACAAATTGTTaGAGTGCTCAGCATGCCCTT +
Preference number: 5 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELVRTNC*SAQHAL
Trigger: AAGGGCATGCTGAGCACTCAAACAATTTGTTCTTAC...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTGTAAGAACAAATTGTTaGAGTGCTCAGCATGCCCTT +
Preference number: 5 (lower is better)
Translates to: LLRAGFGLLGIELSALGLVRTNC*SAQHAL
Trigger: AAGGGCATGCTGAGCACTCAAACAATTTGTTCTTAC...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS CCA 90 bp AGAGCTATGAGGTCTGTAGGGAAATGCAGTCAATACAGTTTCGTTTaGTTTTATAGTGATGACGTGAGTTGCCCTTCTGTCCTGGGATGT +
Preference number: 5 (lower is better)
Translates to: RAMRSVGKCSQYSFV*FYSDDVSCPSVLGC
Trigger: ACATCCCAGGACAGAAGGGCAACTCACGTCATCACTATAAAACCAAACGAAACTGTATTGACTGCATTTCCCTACAGACCTCATAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000526375.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531949.1
CDS-3UTR CAA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCCTGGCAGTACTTGTCTaGATGTCTGTAGCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFLAVLV*MSVAEN
Trigger: ATTCTCAGCTACAGACATCAAGACAAGTACTGCCAG...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTAGGTTGTTCACTATTTaGAGTAACATCCGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSRLFTI*SNIRRQ
Trigger: TTGCCTTCGGATGTTACTCAAAATAGTGAACAACCT...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTAGGTTGTTCACTATTTaGAGTAACATCCGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: LLRAGFGLLGIELSALGLRLFTI*SNIRRQ
Trigger: TTGCCTTCGGATGTTACTCAAAATAGTGAACAACCT...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGATTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGAGGTTGTTCACTATTTaGAGTAACATCCGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: RLSFWVLFPFGLLIFSLLRLFTI*SNIRRQ
Trigger: TTGCCTTCGGATGTTACTCAAAATAGTGAACAACCT...CAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCAGGTTGTTCACTATTTaGAGTAACATCCGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSRLFTI*SNIRRQ
Trigger: TTGCCTTCGGATGTTACTCAAAATAGTGAACAACCT...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCAAAGGATACTTTGCTTTaGTTCATCTGGCACAAATTC +
Preference number: 5 (lower is better)
Translates to: LPSRLLIAGPLRFALYISKDTLL*FIWHKF
Trigger: GAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTT...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTAGATTAGAAGACTGTTaGACATGGGATGATGTAGAC +
Preference number: 5 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCRLEDC*TWDDVD
Trigger: GTCTACATCATCCCATGTCAAACAGTCTTCTAATCT...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp GTGACGCAGCTTGGTCCTGCAGAAGCTTGGTTTGCATTTGAGAAGGTTGTACAAAGATTAGAAGACTGTTaGACATGGGATGATGTAGAC +
Preference number: 5 (lower is better)
Translates to: VTQLGPAEAWFAFEKVVQRLEDC*TWDDVD
Trigger: GTCTACATCATCCCATGTCAAACAGTCTTCTAATCT...TTGTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAGGACCAAGCTGCGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATGTCCAGATTAGAAGACTGTTaGACATGGGATGATGTAGAC +
Preference number: 5 (lower is better)
Translates to: FTSSDCRSPEVCPIHFMSRLEDC*TWDDVD
Trigger: GTCTACATCATCCCATGTCAAACAGTCTTCTAATCT...GGACATGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAATATGGGATGTTGAGGCTTGCACAATATGGGATGTaGAGGCTTCAGGTAATATGG +
Preference number: 5 (lower is better)
Translates to: AEVGVVFQGTAQYGMLRLAQYGM*RLQVIW
Trigger: CCATATTACCTGAAGCCTCAACATCCCATATTGTGC...AAGCCTCAACATCCCATATTGTGCAGTTCCCTGAAATACAACACCTACTTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTGAGGATTTCTGGCCTTaGGCTTGCACGTCTAAAGAA +
Preference number: 5 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPEDFWP*ACTSKE
Trigger: TTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTC...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGCTAAGGAATGCCTCTTaGAGGATTTCTGGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKLRNAS*RISGLW
Trigger: CCAAAGGCCAGAAATCCTCAAAGAGGCATTCCTTAG...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGCTAAGGATTTCTGCTTaGGAGATTGCCAGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKLRISA*EIASLC
Trigger: GCAAAGGCTGGCAATCTCCAAAGCAGAAATCCTTAG...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGAGTTGCTCTTTAGTTaGATTAAGTTGAGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRELLFS*IKLSLL
Trigger: AAGCAAGCTCAACTTAATCAAACTAAAGAGCAACTC...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGATTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGTTGCTGATCTGGGAGTaGCTCTTTAGTTTGATTAAG +
Preference number: 5 (lower is better)
Translates to: RLSFWVLFPFGLLIFSLLLLIWE*LFSLIK
Trigger: CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAA...CAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTTGCTGATCTGGGAGTaGCTCTTTAGTTTGATTAAG +
Preference number: 5 (lower is better)
Translates to: LGYVGLLRAGFGLLGIELLLIWE*LFSLIK
Trigger: CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAA...AAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGTCCTTCTGGGTATTGTTCCCCTTTGGCTTGCTGATCTTCAGCTTGCTGATCTTGTCCATCTTTAGATaGTCCTTCTGGGTATTGTTC +
Preference number: 5 (lower is better)
Translates to: LSFWVLFPFGLLIFSLLILSIFR*SFWVLF
Trigger: GAACAATACCCAGAAGGACAATCTAAAGATGGACAA...GATCAGCAAGCTGAAGATCAGCAAGCCAAAGGGGAACAATACCCAGAAGGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTGCTGGTCTTTAACTaGTCCATCTTTAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIELLVFN*SIFRLS
Trigger: GGACAATCTAAAGATGGACAAGTTAAAGACCAGCAG...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGTTGAACATTTTGGAATaGTCCTTTCGGGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: WAVACWVWTSWYRAFCFRLNILE*SFRGFL
Trigger: AAGAAATCCCCGAAAGGACAATTCCAAAATGTTCAA...CCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGCCTTCACGTCTTCTGATTGCAGGTCCCCTGAGGTTTGCCCTATACATTTCATTGAACATTTTGGAATaGTCCTTTCGGGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: LPSRLLIAGPLRFALYISLNILE*SFRGFL
Trigger: AAGAAATCCCCGAAAGGACAATTCCAAAATGTTCAA...TGAAATGTATAGGGCAAACCTCAGGGGACCTGCAATCAGAAGACGTGAAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTAGCTGAATGGACATATTTTCTGAGGGCTTTTTCTCTAGTGTGGGAGGCAAAGTTCGGCTTGAACATTTaGGAATTGTCCTTTCGGGGA +
Preference number: 5 (lower is better)
Translates to: LAEWTYFLRAFSLVWEAKFGLNI*ELSFRG
Trigger: TCCCCGAAAGGACAATTCCAAAATGTTCAAGCCGAA...CTTTGCCTCCCACACTAGAGAAAAAGCCCTCAGAAAATATGTCCATTCAGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCTTGCTGTCCTTCGGCTaGAACATTTTGGAATTGTCC +
Preference number: 5 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFLLSFG*NILELS
Trigger: GGACAATTCCAAAATGTTCAAGCCGAAGGACAGCAA...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GCTGAAGTAGGTGTTGTATTTCAGGGAACTGCACAATATGGGATGTTGAGGCTTTTGCTGTCCTTCGGCTaGAACATTTTGGAATTGTCC +
Preference number: 5 (lower is better)
Translates to: AEVGVVFQGTAQYGMLRLLLSFG*NILELS
Trigger: GGACAATTCCAAAATGTTCAAGCCGAAGGACAGCAA...AAGCCTCAACATCCCATATTGTGCAGTTCCCTGAAATACAACACCTACTTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTTTCTCCACCTGAGCTaGCTGTCCTTCGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVFLHLS*LSFGLN
Trigger: GTTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAA...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGGTGGAATTGCCAGAATaGGTATTGCTGTATTTGGGA +
Preference number: 5 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIEVELPE*VLLYLG
Trigger: TCCCAAATACAGCAATACCAATTCTGGCAATTCCAC...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGGCCTGGAGATTGCCTTaGTGGAATTGCCAGAATTGG +
Preference number: 5 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWAWRLP*WNCQNW
Trigger: CCAATTCTGGCAATTCCACAAAGGCAATCTCCAGGC...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGTGTCCAGCCTGGAGATaGCCTTTGTGGAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWCPAWR*PLWNCQ
Trigger: CTGGCAATTCCACAAAGGCAATCTCCAGGCTGGACA...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGATTGACAGTCCTGGGTaGTCCAGCCTGGAGATTGCC +
Preference number: 5 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLIDSPG*SSLEIA
Trigger: GGCAATCTCCAGGCTGGACAACCCAGGACTGTCAAT...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCCCAGTCAGGGGATTCTaGGCCAAAAGATTGACAGTC +
Preference number: 5 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIPVRGF*AKRLTV
Trigger: GACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGG...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGGTTATGTTGGGCTGTaGCGTGCTGGGTTTGGACTT +
Preference number: 5 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWGYVGL*RAGFGL
Trigger: AAGTCCAAACCCAGCACGCAACAGCCCAACATAACC...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCATGTCATGAAACAGCATATCTTGAGATGATGTGTCTTGGGATAGTATGCCTTGGTTATGTTGGGCTGTaGCGTGCTGGGTTTGGACTT +
Preference number: 5 (lower is better)
Translates to: SCHETAYLEMMCLGIVCLGYVGL*RAGFGL
Trigger: AAGTCCAAACCCAGCACGCAACAGCCCAACATAACC...AAGGCATACTATCCCAAGACACATCATCTCAAGATATGCTGTTTCATGACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp GGTAATATGGCATGCGCTGATAGAGCTTGGGATAGCATATCTTGGGAAGGTATGGGATTGAAGGTCTTGTaGGTCTTTATCTTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: GNMACADRAWDSISWEGMGLKVL*VFILSV
Trigger: GACACTCAAGATAAAGACCAACAAGACCTTCAATCC...CATACCTTCCCAAGATATGCTATCCCAAGCTCTATCAGCGCATGCCATATTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGGGATTGAAGGTCTTGTaGGTCTTTATCTTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIEGLKVL*VFILSV
Trigger: GACACTCAAGATAAAGACCAACAAGACCTTCAATCC...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGGATTGAAGGTCTTGTaGGTCTTTATCTTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRGLKVL*VFILSV
Trigger: GACACTCAAGATAAAGACCAACAAGACCTTCAATCC...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTCTGGATTGAAGGTCTaGTTGGTCTTTATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: SRLCWAVACWVWTSWYRASGLKV*LVFILS
Trigger: ACTCAAGATAAAGACCAACAAGACCTTCAATCCAGA...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGAGTTATCCAGTCAGGGGATTCTTGGCCAAAAGATTGACAGTCCTGGGTTGTTTGTGTAACTCTGGATaGAAGGTCTTGTTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: LSYPVRGFLAKRLTVLGCLCNSG*KVLLVF
Trigger: AAAGACCAACAAGACCTTCAATCCAGAGTTACACAA...ACAACCCAGGACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGGATAACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTGTGTAACTCTGGATaGAAGGTCTTGTTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: SRLCWAVACWVWTSWYRALCNSG*KVLLVF
Trigger: AAAGACCAACAAGACCTTCAATCCAGAGTTACACAA...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTGGGGGCAGTGTGGTATaGGGTAGATTCTGCATGTTA +
Preference number: 5 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIGGSVV*GRFCML
Trigger: TAACATGCAGAATCTACCCAATACCACACTGCCCCC...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS TCA 90 bp GGAAATGCAGTCAATACAGTTTCGTTTGGTTTTATAGTGATGACGTaGGTTGCCCTTCTGTCCTGGGATGTTGACTCCATGATTCTATGG +
Preference number: 5 (lower is better)
Translates to: GNAVNTVSFGFIVMT*VALLSWDVDSMILW
Trigger: CCATAGAATCATGGAGTCAACATCCCAGGACAGAAGGGCAACTCACGTCATCACTATAAAACCAAACGAAACTGTATTGACTGCATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000526375.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531949.1
CDS-3UTR CAA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAAGGTTGTTCACTATTTaGAGTAACATCCGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRRLFTI*SNIRRQ
Trigger: TTGCCTTCGGATGTTACTCAAAATAGTGAACAACCT...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCTTCTTCTGGGGCAGGTaGTTCACTATTTTGAGTAAC +
Preference number: 5 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFFFWGR*FTILSN
Trigger: GTTACTCAAAATAGTGAACAACCTGCCCCAGAAGAA...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTAAGGATACTTTGCTTTaGTTCATCTGGCACAAATTC +
Preference number: 5 (lower is better)
Translates to: SRLCWAVACWVWTSWYRAKDTLL*FIWHKF
Trigger: GAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTT...AGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCGCACAATATGGGATGTaGAGGCTTCAGGTAATATGG +
Preference number: 5 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISAQYGM*RLQVIW
Trigger: CCATATTACCTGAAGCCTCAACATCCCATATTGTGC...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTTCAGTGTTTTCTGGTaGAAGATCTGGGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMFSVFW*KIWGLL
Trigger: CAGCAGCCCCCAGATCTTCAACCAGAAAACACTGAA...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTTCAGTGTTTTCTGGTaGAAGATCTGGGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVFSVFW*KIWGLL
Trigger: CAGCAGCCCCCAGATCTTCAACCAGAAAACACTGAA...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGATTAAGGAATGCCGTCTaGAGGATTTTCTTCTATGGA +
Preference number: 5 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRLRNAV*RIFFYG
Trigger: TCCATAGAAGAAAATCCTCAAGACGGCATTCCTTAA...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCGAGGATTTCTGGCCTTaGGCTTGCACGTCTAAAGAA +
Preference number: 5 (lower is better)
Translates to: FGRWKDTLLLFIWHKFSTEDFWP*ACTSKE
Trigger: TTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTC...GGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTCTAAGGAATGCCTCTTaGAGGATTTCTGGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: FCFRASFSNRSCVCQCFILRNAS*RISGLW
Trigger: CCAAAGGCCAGAAATCCTCAAAGAGGCATTCCTTAG...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTTTCTGCTTTGGAGATaGCCAGCCTTTGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIFLLWR*PAFALL
Trigger: CAGCAAAGCAAAGGCTGGCAATCTCCAAAGCAGAAA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTCTAAGGATTTCTGCTTaGGAGATTGCCAGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: FCFRASFSNRSCVCQCFILRISA*EIASLC
Trigger: GCAAAGGCTGGCAATCTCCAAAGCAGAAATCCTTAG...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCTTGATTAAGTTGAGCTaGCTTATCTACGGAGTGCCT +
Preference number: 5 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFLIKLS*LIYGVP
Trigger: AGGCACTCCGTAGATAAGCAAGCTCAACTTAATCAA...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GCTGATCCTGGGTTTGCTTCTTTGAGTTTTGCTCCTTATCAGTCTGCTGGTCTTTTGCTGATCTGGGAGTaGCTCTTTAGTTTGATTAAG +
Preference number: 5 (lower is better)
Translates to: ADPGFASLSFAPYQSAGLLLIWE*LFSLIK
Trigger: CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAA...AAGACCAGCAGACTGATAAGGAGCAAAACTCAAAGAAGCAAACCCAGGATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCCTGCTGGTCTTTAACTaGTCCATCTTTAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFLLVFN*SIFRLS
Trigger: GGACAATCTAAAGATGGACAAGTTAAAGACCAGCAG...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTCGGCTGGTCTTCAGTTaGCTGATCCTGGGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLRLVFS*LILGLL
Trigger: AAGCAAACCCAGGATCAGCAAACTGAAGACCAGCCG...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTGCTTTAGGGCTTTTGAACATTTTGGAATaGTCCTTTCGGGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: LLRAGFGLLGIELSALGLLNILE*SFRGFL
Trigger: AAGAAATCCCCGAAAGGACAATTCCAAAATGTTCAA...AAGCCCTAAAGCAGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTTCGGCTTGAACATTTaGGAATTGTCCTTTCGGGGA +
Preference number: 5 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISFGLNI*ELSFRG
Trigger: TCCCCGAAAGGACAATTCCAAAATGTTCAAGCCGAA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTTTCTCCACCTGAGCTaGCTGTCCTTCGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLFLHLS*LSFGLN
Trigger: GTTCAAGCCGAAGGACAGCAAGCTCAGGTGGAGAAA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTCTTGGCATAACAGTTTaGGCACTTTCTCCACCTGAG +
Preference number: 5 (lower is better)
Translates to: LGDGRILCFCSSGTNSLPLGITV*ALSPPE
Trigger: CTCAGGTGGAGAAAGTGCCAAAACTGTTATGCCAAG...AGGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCCTTGGCATAACAGTTTaGGCACTTTCTCCACCTGAG +
Preference number: 5 (lower is better)
Translates to: RASFSNRSCVCQCFISNCLGITV*ALSPPE
Trigger: CTCAGGTGGAGAAAGTGCCAAAACTGTTATGCCAAG...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGATTAGAAGACTGTTTGACATGGGATGATGTAGACTTAGATGGCATGGTTTGTGCCTGGAGATTGCCTTaGTGGAATTGCCAGAATTGG +
Preference number: 5 (lower is better)
Translates to: RLEDCLTWDDVDLDGMVCAWRLP*WNCQNW
Trigger: CCAATTCTGGCAATTCCACAAAGGCAATCTCCAGGC...ACAAACCATGCCATCTAAGTCTACATCATCCCATGTCAAACAGTCTTCTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCACCAGTCAGGGGATTCTaGGCCAAAAGATTGACAGTC +
Preference number: 5 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGAPVRGF*AKRLTV
Trigger: GACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGG...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGGGGGCAGTGTGGTATaGGGTAGATTCTGCATGTTA +
Preference number: 5 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWGGSVV*GRFCML
Trigger: TAACATGCAGAATCTACCCAATACCACACTGCCCCC...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAGGGGGCAGTGTGGTATaGGGTAGATTCTGCATGTTA +
Preference number: 5 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTGGSVV*GRFCML
Trigger: TAACATGCAGAATCTACCCAATACCACACTGCCCCC...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGCTTTCTTTAAGTAAGAACAAATaGTTTGAGTGCTCAGCATGC +
Preference number: 5 (lower is better)
Translates to: GYVGLLRAGFGLLGIELSLSKNK*FECSAC
Trigger: GCATGCTGAGCACTCAAACAATTTGTTCTTACTTAA...AGAAAGCTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS GCA 90 bp TCCCTTCAGAAAATCCAGCAGAGAGCTATGAGGTCTGTAGGGAAATaGAGTCAATACAGTTTCGTTTGGTTTTATAGTGATGACGTGAGT +
Preference number: 5 (lower is better)
Translates to: SLQKIQQRAMRSVGK*SQYSFVWFYSDDVS
Trigger: ACTCACGTCATCACTATAAAACCAAACGAAACTGTATTGACTGCATTTCCCTACAGACCTCATAGCTCTCTGCTGGATTTTCTGAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000526375.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531949.1
CDS-3UTR CAA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCCTTGACCCAGAAGTTTaGATTTCTTATCGGTTACTG +
Preference number: 5 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFLDPEV*ISYRLL
Trigger: CAGTAACCGATAAGAAATCAAAACTTCTGGGTCAAG...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300187.11
ENST00000525397.5
ENST00000531783.5
CDS-3UTR CAA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGCTGGCAGTACTTGTCTaGATGTCTGTAGCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWLAVLV*MSVAEN
Trigger: ATTCTCAGCTACAGACATCAAGACAAGTACTGCCAG...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCAGGTTGTTCACTATTTaGAGTAACATCCGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFRLFTI*SNIRRQ
Trigger: TTGCCTTCGGATGTTACTCAAAATAGTGAACAACCT...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGAAGGATACTTTGCTTTaGTTCATCTGGCACAAATTC +
Preference number: 5 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIEKDTLL*FIWHKF
Trigger: GAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTT...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCAGATGGAAGGATACTTaGCTTTTGTTCATCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISRWKDT*LLFIWH
Trigger: GTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCT...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGAGATGGAAGGATACTTaGCTTTTGTTCATCTGGCAC +
Preference number: 5 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKRWKDT*LLFIWH
Trigger: GTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCT...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCCTGCAGAAGCTTGGTTaGCATTTGAGAAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: RASFSNRSCVCQCFISNCLQKLG*HLRRLY
Trigger: GTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAG...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTCTGCAGAAGCTTGGTTaGCATTTGAGAAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: LGDGRILCFCSSGTNSLPLQKLG*HLRRLY
Trigger: GTACAACCTTCTCAAATGCAAACCAAGCTTCTGCAG...AGGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAGAGGATTTCTGGCCTTaGGCTTGCACGTCTAAAGAA +
Preference number: 5 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTEDFWP*ACTSKE
Trigger: TTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTC...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTTCTGCTTTGGAGATaGCCAGCCTTTGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTFLLWR*PAFALL
Trigger: CAGCAAAGCAAAGGCTGGCAATCTCCAAAGCAGAAA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTTGATTAAGTTGAGCTaGCTTATCTACGGAGTGCCT +
Preference number: 5 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISLIKLS*LIYGVP
Trigger: AGGCACTCCGTAGATAAGCAAGCTCAACTTAATCAA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGTTGATTAAGTTGAGCTaGCTTATCTACGGAGTGCCT +
Preference number: 5 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKLIKLS*LIYGVP
Trigger: AGGCACTCCGTAGATAAGCAAGCTCAACTTAATCAA...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGCCAGTCTTTGATTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTGAGTTGCTCTTTAGTTaGATTAAGTTGAGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: SQSLICWSKDFCFGDCQPELLFS*IKLSLL
Trigger: AAGCAAGCTCAACTTAATCAAACTAAAGAGCAACTC...AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTTTGCTGATCTTCAGCTaGCTGATCTGGGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGLLIFS*LIWELL
Trigger: GAGCAACTCCCAGATCAGCAAGCTGAAGATCAGCAA...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGATTGAACATTTTGGAATaGTCCTTTCGGGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: HSRLCWAVACWVWTSWYRLNILE*SFRGFL
Trigger: AAGAAATCCCCGAAAGGACAATTCCAAAATGTTCAA...TCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGCCAGTCTTTGATTTGCTGGTCTAAGGATTTCTGCTTTGGAGATTGCCAGCCTTTGAACATTTTGGAATaGTCCTTTCGGGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: SQSLICWSKDFCFGDCQPLNILE*SFRGFL
Trigger: AAGAAATCCCCGAAAGGACAATTCCAAAATGTTCAA...AGGCTGGCAATCTCCAAAGCAGAAATCCTTAGACCAGCAAATCAAAGACTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCTTCGGCTTGAACATTTaGGAATTGTCCTTTCGGGGA +
Preference number: 5 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIFGLNI*ELSFRG
Trigger: TCCCCGAAAGGACAATTCCAAAATGTTCAAGCCGAA...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TATCTTGGGATGTCATGTCATGAAACAGCATATCTTGAGATGATGTGTCTTGGGTTGCTGTCCTTCGGCTaGAACATTTTGGAATTGTCC +
Preference number: 5 (lower is better)
Translates to: YLGMSCHETAYLEMMCLGLLSFG*NILELS
Trigger: GGACAATTCCAAAATGTTCAAGCCGAAGGACAGCAA...CCCAAGACACATCATCTCAAGATATGCTGTTTCATGACATGACATCCCAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTTGCTGTCCTTCGGCTaGAACATTTTGGAATTGTCC +
Preference number: 5 (lower is better)
Translates to: FCFRASFSNRSCVCQCFILLSFG*NILELS
Trigger: GGACAATTCCAAAATGTTCAAGCCGAAGGACAGCAA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCCTTGGCATAACAGTTTaGGCACTTTCTCCACCTGAG +
Preference number: 5 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSLGITV*ALSPPE
Trigger: CTCAGGTGGAGAAAGTGCCAAAACTGTTATGCCAAG...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCACTTGGCATAACAGTTTaGGCACTTTCTCCACCTGAG +
Preference number: 5 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGALGITV*ALSPPE
Trigger: CTCAGGTGGAGAAAGTGCCAAAACTGTTATGCCAAG...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGATTGCCTTTGTGGAATaGCCAGAATTGGTATTGCTG +
Preference number: 5 (lower is better)
Translates to: GLVGLYLECLDILGYVGLIAFVE*PELVLL
Trigger: CAGCAATACCAATTCTGGCAATTCCACAAAGGCAAT...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTTCTTGGCCAAAAGATaGACAGTCCTGGGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMFLAKR*TVLGCP
Trigger: TGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAA...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTCTTGGCCAAAAGATaGACAGTCCTGGGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSFLAKR*TVLGCP
Trigger: TGGACAACCCAGGACTGTCAATCTTTTGGCCAAGAA...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGCCAGTCAGGGGATTCTaGGCCAAAAGATTGACAGTC +
Preference number: 5 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLPVRGF*AKRLTV
Trigger: GACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGG...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGCCAGTCAGGGGATTCTaGGCCAAAAGATTGACAGTC +
Preference number: 5 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLPVRGF*AKRLTV
Trigger: GACTGTCAATCTTTTGGCCAAGAATCCCCTGACTGG...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp ATTCTAGGTTATGTTGGGCTGTTGCGTGCTGGGTTTGGACTTCTTGGTATAGAGGTGCTTCATTTCAAATaGCCATTCTCGTGCTTTATA +
Preference number: 5 (lower is better)
Translates to: ILGYVGLLRAGFGLLGIEVLHFK*PFSCFI
Trigger: TATAAAGCACGAGAATGGCAATTTGAAATGAAGCAC...CTCTATACCAAGAAGTCCAAACCCAGCACGCAACAGCCCAACATAACCTAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGGGATTGAAGGTCTTGTaGGTCTTTATCTTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: GLVGLYLECLDILGYVGLGLKVL*VFILSV
Trigger: GACACTCAAGATAAAGACCAACAAGACCTTCAATCC...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCTTGTGTAACTCTGGATaGAAGGTCTTGTTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFLCNSG*KVLLVF
Trigger: AAAGACCAACAAGACCTTCAATCCAGAGTTACACAA...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGGTCAGAGTCTTCAGATaGCTGTTGATCTTTTGGATC +
Preference number: 5 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKVRVFR*LLIFWI
Trigger: GATCCAAAAGATCAACAGCAATCTGAAGACTCTGAC...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGGGGGGCAGTGTGGTATaGGGTAGATTCTGCATGTTA +
Preference number: 5 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLGGSVV*GRFCML
Trigger: TAACATGCAGAATCTACCCAATACCACACTGCCCCC...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCAGGTTGTTCACTATTTaGAGTAACATCCGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISRLFTI*SNIRRQ
Trigger: TTGCCTTCGGATGTTACTCAAAATAGTGAACAACCT...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCACTATTTTGAGTAACATCCGAAGGCAAGAAAAACAGAACCTGGTGACGGTTTTCTTCTGGGGCAGGTaGTTCACTATTTTGAGTAAC +
Preference number: 5 (lower is better)
Translates to: FTILSNIRRQEKQNLVTVFFWGR*FTILSN
Trigger: GTTACTCAAAATAGTGAACAACCTGCCCCAGAAGAA...AACCGTCACCAGGTTCTGTTTTTCTTGCCTTCGGATGTTACTCAAAATAGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000525397.5
ENST00000527841.5
CDS-3UTR CAA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTTCTTCTGGGGCAGGTaGTTCACTATTTTGAGTAAC +
Preference number: 5 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWFFWGR*FTILSN
Trigger: GTTACTCAAAATAGTGAACAACCTGCCCCAGAAGAA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCAGATGGAAGGATACTTaGCTTTTGTTCATCTGGCAC +
Preference number: 5 (lower is better)
Translates to: RASFSNRSCVCQCFISNCRWKDT*LLFIWH
Trigger: GTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCT...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGAGATGGAAGGATACTTaGCTTTTGTTCATCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWRWKDT*LLFIWH
Trigger: GTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCT...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGCACAATATGGGATGTaGAGGCTTCAGGTAATATGG +
Preference number: 5 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGAAQYGM*RLQVIW
Trigger: CCATATTACCTGAAGCCTCAACATCCCATATTGTGC...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGTTAAGGAATGCCGTCTaGAGGATTTTCTTCTATGGA +
Preference number: 5 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKLRNAV*RIFFYG
Trigger: TCCATAGAAGAAAATCCTCAAGACGGCATTCCTTAA...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGAGGATTTCTGGCCTTaGGCTTGCACGTCTAAAGAA +
Preference number: 5 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLEDFWP*ACTSKE
Trigger: TTCTTTAGACGTGCAAGCCAAAGGCCAGAAATCCTC...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTTTCTGCTTTGGAGATaGCCAGCCTTTGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLFLLWR*PAFALL
Trigger: CAGCAAAGCAAAGGCTGGCAATCTCCAAAGCAGAAA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTCTAAGGATTTCTGCTTaGGAGATTGCCAGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLLRISA*EIASLC
Trigger: GCAAAGGCTGGCAATCTCCAAAGCAGAAATCCTTAG...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGTTGATTAAGTTGAGCTaGCTTATCTACGGAGTGCCT +
Preference number: 5 (lower is better)
Translates to: NLDWTNRLNMCLVLSFGQLIKLS*LIYGVP
Trigger: AGGCACTCCGTAGATAAGCAAGCTCAACTTAATCAA...CTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCTTGATTAAGTTGAGCTaGCTTATCTACGGAGTGCCT +
Preference number: 5 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWILIKLS*LIYGVP
Trigger: AGGCACTCCGTAGATAAGCAAGCTCAACTTAATCAA...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTTGCTGATCTGGGAGTaGCTCTTTAGTTTGATTAAG +
Preference number: 5 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISLLIWE*LFSLIK
Trigger: CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGTTGTCCATCTTTAGATaGTCCTTCTGGGTATTGTTC +
Preference number: 5 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKLSIFR*SFWVLF
Trigger: GAACAATACCCAGAAGGACAATCTAAAGATGGACAA...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGTTCGGCTTGAACATTTaGGAATTGTCCTTTCGGGGA +
Preference number: 5 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWFGLNI*ELSFRG
Trigger: TCCCCGAAAGGACAATTCCAAAATGTTCAAGCCGAA...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTTGCTGTCCTTCGGCTaGAACATTTTGGAATTGTCC +
Preference number: 5 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVLLSFG*NILELS
Trigger: GGACAATTCCAAAATGTTCAAGCCGAAGGACAGCAA...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCGTGGAATTGCCAGAATaGGTATTGCTGTATTTGGGA +
Preference number: 5 (lower is better)
Translates to: RASFSNRSCVCQCFISNCVELPE*VLLYLG
Trigger: TCCCAAATACAGCAATACCAATTCTGGCAATTCCAC...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTGTGGAATTGCCAGAATaGGTATTGCTGTATTTGGGA +
Preference number: 5 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIVELPE*VLLYLG
Trigger: TCCCAAATACAGCAATACCAATTCTGGCAATTCCAC...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCATTGCCTTTGTGGAATaGCCAGAATTGGTATTGCTG +
Preference number: 5 (lower is better)
Translates to: RASFSNRSCVCQCFISNCIAFVE*PELVLL
Trigger: CAGCAATACCAATTCTGGCAATTCCACAAAGGCAAT...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCATTGCCTTTGTGGAATaGCCAGAATTGGTATTGCTG +
Preference number: 5 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIIAFVE*PELVLL
Trigger: CAGCAATACCAATTCTGGCAATTCCACAAAGGCAAT...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GCTTTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCGTGCTTCATTTCAAATaGCCATTCTCGTGCTTTATA +
Preference number: 5 (lower is better)
Translates to: AFCFRASFSNRSCVCQCFVLHFK*PFSCFI
Trigger: TATAAAGCACGAGAATGGCAATTTGAAATGAAGCAC...GAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGGGATTGAAGGTCTTGTaGGTCTTTATCTTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWGLKVL*VFILSV
Trigger: GACACTCAAGATAAAGACCAACAAGACCTTCAATCC...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTCTGGATTGAAGGTCTaGTTGGTCTTTATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISSGLKV*LVFILS
Trigger: ACTCAAGATAAAGACCAACAAGACCTTCAATCCAGA...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTTTGTGTAACTCTGGATaGAAGGTCTTGTTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPLCNSG*KVLLVF
Trigger: AAAGACCAACAAGACCTTCAATCCAGAGTTACACAA...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGGTCAGAGTCTTCAGATaGCTGTTGATCTTTTGGATC +
Preference number: 5 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWVRVFR*LLIFWI
Trigger: GATCCAAAAGATCAACAGCAATCTGAAGACTCTGAC...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCGTCAGAGTCTTCAGATaGCTGTTGATCTTTTGGATC +
Preference number: 5 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIVRVFR*LLIFWI
Trigger: GATCCAAAAGATCAACAGCAATCTGAAGACTCTGAC...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGATCGTAAGAACAAATTGTTaGAGTGCTCAGCATGCCCTT +
Preference number: 5 (lower is better)
Translates to: GRFCMLVRVFRLLLIFWIVRTNC*SAQHAL
Trigger: AAGGGCATGCTGAGCACTCAAACAATTTGTTCTTAC...GATCCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGGACTGTGTCCAGCACTaGCTTCTAAAGGATGCAATA +
Preference number: 5 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMDCVQH*LLKDAI
Trigger: TATTGCATCCTTTAGAAGCAAGTGCTGGACACAGTC...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395001.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CAA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGACTGTGTCCAGCACTaGCTTCTAAAGGATGCAATA +
Preference number: 5 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGADCVQH*LLKDAI
Trigger: TATTGCATCCTTTAGAAGCAAGTGCTGGACACAGTC...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395001.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CAA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCAACAAGGGGAAGTCTTaGGGAGAAACCGATGTAATT +
Preference number: 5 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSNKGKS*GETDVI
Trigger: AATTACATCGGTTTCTCCCAAAGACTTCCCCTTGTT...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CAA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGAACAAGGGGAAGTCTTaGGGAGAAACCGATGTAATT +
Preference number: 5 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMNKGKS*GETDVI
Trigger: AATTACATCGGTTTCTCCCAAAGACTTCCCCTTGTT...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CAA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTCTTGACCCAGAAGTTTaGATTTCTTATCGGTTACTG +
Preference number: 5 (lower is better)
Translates to: FCFRASFSNRSCVCQCFILDPEV*ISYRLL
Trigger: CAGTAACCGATAAGAAATCAAAACTTCTGGGTCAAG...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300187.11
ENST00000525397.5
ENST00000531783.5
CDS-3UTR CAA 90 bp TTGGGAGATGGAAGGATACTTTGCTTTTGTTCATCTGGCACAAATTCTCTACCTCTTGACCCAGAAGTTTaGATTTCTTATCGGTTACTG +
Preference number: 5 (lower is better)
Translates to: LGDGRILCFCSSGTNSLPLDPEV*ISYRLL
Trigger: CAGTAACCGATAAGAAATCAAAACTTCTGGGTCAAG...AGGTAGAGAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCTCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525397.5
CDS-3UTR CAA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTCTGGCAGTACTTGTCTaGATGTCTGTAGCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGLAVLV*MSVAEN
Trigger: ATTCTCAGCTACAGACATCAAGACAAGTACTGCCAG...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGCTGGCAGTACTTGTCTaGATGTCTGTAGCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLLAVLV*MSVAEN
Trigger: ATTCTCAGCTACAGACATCAAGACAAGTACTGCCAG...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTTCTGGGGCAGGTaGTTCACTATTTTGAGTAAC +
Preference number: 5 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTFFWGR*FTILSN
Trigger: GTTACTCAAAATAGTGAACAACCTGCCCCAGAAGAA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGAAGGATACTTTGCTTTaGTTCATCTGGCACAAATTC +
Preference number: 5 (lower is better)
Translates to: GLVGLYLECLDILGYVGLKDTLL*FIWHKF
Trigger: GAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTT...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCTAAGGATACTTTGCTTTaGTTCATCTGGCACAAATTC +
Preference number: 5 (lower is better)
Translates to: CPIHFMSPGLMSLVYISPKDTLL*FIWHKF
Trigger: GAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTT...AGGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGAGATGGAAGGATACTTaGCTTTTGTTCATCTGGCAC +
Preference number: 5 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWRWKDT*LLFIWH
Trigger: GTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCT...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGCACAATATGGGATGTaGAGGCTTCAGGTAATATGG +
Preference number: 5 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLAQYGM*RLQVIW
Trigger: CCATATTACCTGAAGCCTCAACATCCCATATTGTGC...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCTTAAGGAATGCCGTCTaGAGGATTTTCTTCTATGGA +
Preference number: 5 (lower is better)
Translates to: RASFSNRSCVCQCFISNCLRNAV*RIFFYG
Trigger: TCCATAGAAGAAAATCCTCAAGACGGCATTCCTTAA...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTTAAGGAATGCCGTCTaGAGGATTTTCTTCTATGGA +
Preference number: 5 (lower is better)
Translates to: FCFRASFSNRSCVCQCFILRNAV*RIFFYG
Trigger: TCCATAGAAGAAAATCCTCAAGACGGCATTCCTTAA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCACTATTTTGAGTAACATCCGAAGGCAAGAAAAACAGAACCTGGTGACGGTTTTAAGGAATGCCGTCTaGAGGATTTTCTTCTATGGA +
Preference number: 5 (lower is better)
Translates to: FTILSNIRRQEKQNLVTVLRNAV*RIFFYG
Trigger: TCCATAGAAGAAAATCCTCAAGACGGCATTCCTTAA...AACCGTCACCAGGTTCTGTTTTTCTTGCCTTCGGATGTTACTCAAAATAGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000525397.5
ENST00000527841.5
CDS-3UTR CAA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTGATTAAGTTGAGCTaGCTTATCTACGGAGTGCCT +
Preference number: 5 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTLIKLS*LIYGVP
Trigger: AGGCACTCCGTAGATAAGCAAGCTCAACTTAATCAA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGGAGTTGCTCTTTAGTTaGATTAAGTTGAGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: GLVGLYLECLDILGYVGLELLFS*IKLSLL
Trigger: AAGCAAGCTCAACTTAATCAAACTAAAGAGCAACTC...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGCCCTATACATTTCATGTCCCCTGGTTTGATGTCTCTAGTGTACATATCTCCGAGTTGCTCTTTAGTTaGATTAAGTTGAGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: LPYTFHVPWFDVSSVHISELLFS*IKLSLL
Trigger: AAGCAAGCTCAACTTAATCAAACTAAAGAGCAACTC...GGAGATATGTACACTAGAGACATCAAACCAGGGGACATGAAATGTATAGGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCTTGTCCATCTTTAGATaGTCCTTCTGGGTATTGTTC +
Preference number: 5 (lower is better)
Translates to: RASFSNRSCVCQCFISNCLSIFR*SFWVLF
Trigger: GAACAATACCCAGAAGGACAATCTAAAGATGGACAA...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGCTGCTGGTCTTTAACTaGTCCATCTTTAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWLLVFN*SIFRLS
Trigger: GGACAATCTAAAGATGGACAAGTTAAAGACCAGCAG...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACACTGCTGGTCTTTAACTaGTCCATCTTTAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTLLVFN*SIFRLS
Trigger: GGACAATCTAAAGATGGACAAGTTAAAGACCAGCAG...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCACTGCTGGTCTTTAACTaGTCCATCTTTAGATTGTCC +
Preference number: 5 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGALLVFN*SIFRLS
Trigger: GGACAATCTAAAGATGGACAAGTTAAAGACCAGCAG...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCATTGCCTTTGTGGAATaGCCAGAATTGGTATTGCTG +
Preference number: 5 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSIAFVE*PELVLL
Trigger: CAGCAATACCAATTCTGGCAATTCCACAAAGGCAAT...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTCTAGGTTATGTTGGGCTGGTGCTTCATTTCAAATaGCCATTCTCGTGCTTTATA +
Preference number: 5 (lower is better)
Translates to: GLVGLYLECLDILGYVGLVLHFK*PFSCFI
Trigger: TATAAAGCACGAGAATGGCAATTTGAAATGAAGCAC...CAGCCCAACATAACCTAGAATGTCAAGACACTCAAGATAAAGACCAACAAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGGGATTGAAGGTCTTGTaGGTCTTTATCTTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVGLKVL*VFILSV
Trigger: GACACTCAAGATAAAGACCAACAAGACCTTCAATCC...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCATGTCATGAAACAGCATATCTTGAGATGATGTGTCTTGGGATAGTATGCCTTGTCAGAGTCTTCAGATaGCTGTTGATCTTTTGGATC +
Preference number: 5 (lower is better)
Translates to: SCHETAYLEMMCLGIVCLVRVFR*LLIFWI
Trigger: GATCCAAAAGATCAACAGCAATCTGAAGACTCTGAC...AAGGCATACTATCCCAAGACACATCATCTCAAGATATGCTGTTTCATGACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp GATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTTGGCCAGAAGAAGTTAAGTAAGAACAAATaGTTTGAGTGCTCAGCATGC +
Preference number: 5 (lower is better)
Translates to: DWTNRLNMCLVLSFGQKKLSKNK*FECSAC
Trigger: GCATGCTGAGCACTCAAACAATTTGTTCTTACTTAA...CTTCTTCTGGCCAAAGCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGGTAACAAGGGGAAGTCTTaGGGAGAAACCGATGTAATT +
Preference number: 5 (lower is better)
Translates to: QYCFSQFNSINGGSVVLGNKGKS*GETDVI
Trigger: AATTACATCGGTTTCTCCCAAAGACTTCCCCTTGTT...ACCCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
CDS-3UTR CAA 90 bp GGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGTGGTATTGGAGGTTGTTCACTATTTaGAGTAACATCCGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: GNIVFPNLIPLMGAVWYWRLFTI*SNIRRQ
Trigger: TTGCCTTCGGATGTTACTCAAAATAGTGAACAACCT...CCAATACCACACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGAGATGGAAGGATACTTaGCTTTTGTTCATCTGGCAC +
Preference number: 5 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLRWKDT*LLFIWH
Trigger: GTGCCAGATGAACAAAAGCAAAGTATCCTTCCATCT...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAAGATTAGAAGACTGTTaGACATGGGATGATGTAGAC +
Preference number: 5 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTRLEDC*TWDDVD
Trigger: GTCTACATCATCCCATGTCAAACAGTCTTCTAATCT...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCGAGTTGCTCTTTAGTTaGATTAAGTTGAGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: RASFSNRSCVCQCFISNCELLFS*IKLSLL
Trigger: AAGCAAGCTCAACTTAATCAAACTAAAGAGCAACTC...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TGTCTGGTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTTGCTGATCTGGGAGTaGCTCTTTAGTTTGATTAAG +
Preference number: 5 (lower is better)
Translates to: CLVAHLVLNLDWTNRLNMLLIWE*LFSLIK
Trigger: CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAA...CATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAACCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTGCTGATCTGGGAGTaGCTCTTTAGTTTGATTAAG +
Preference number: 5 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTLLIWE*LFSLIK
Trigger: CTTAATCAAACTAAAGAGCAACTCCCAGATCAGCAA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTGTCCATCTTTAGATaGTCCTTCTGGGTATTGTTC +
Preference number: 5 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSLSIFR*SFWVLF
Trigger: GAACAATACCCAGAAGGACAATCTAAAGATGGACAA...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCATTGTCCATCTTTAGATaGTCCTTCTGGGTATTGTTC +
Preference number: 5 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGALSIFR*SFWVLF
Trigger: GAACAATACCCAGAAGGACAATCTAAAGATGGACAA...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGGGTAGATTCTGCATGTTAGTCAGAGTCTTCAGATTGCTGTTGATCTTTTGGTTGAACATTTTGGAATaGTCCTTTCGGGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: LGRFCMLVRVFRLLLIFWLNILE*SFRGFL
Trigger: AAGAAATCCCCGAAAGGACAATTCCAAAATGTTCAA...CCAAAAGATCAACAGCAATCTGAAGACTCTGACTAACATGCAGAATCTACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGATTGCCTTTGTGGAATaGCCAGAATTGGTATTGCTG +
Preference number: 5 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLIAFVE*PELVLL
Trigger: CAGCAATACCAATTCTGGCAATTCCACAAAGGCAAT...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTGTGCTTCATTTCAAATaGCCATTCTCGTGCTTTATA +
Preference number: 5 (lower is better)
Translates to: FCFRASFSNRSCVCQCFIVLHFK*PFSCFI
Trigger: TATAAAGCACGAGAATGGCAATTTGAAATGAAGCAC...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTGTGTAACTCTGGATaGAAGGTCTTGTTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSLCNSG*KVLLVF
Trigger: AAAGACCAACAAGACCTTCAATCCAGAGTTACACAA...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTAAGAACAAATTGTTaGAGTGCTCAGCATGCCCTT +
Preference number: 5 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLVRTNC*SAQHAL
Trigger: AAGGGCATGCTGAGCACTCAAACAATTTGTTCTTAC...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTCTGCTTTAGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTTAAGTAAGAACAAATaGTTTGAGTGCTCAGCATGC +
Preference number: 5 (lower is better)
Translates to: FCFRASFSNRSCVCQCFILSKNK*FECSAC
Trigger: GCATGCTGAGCACTCAAACAATTTGTTCTTACTTAA...AATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCTAAAGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp AGGGCTTCTTTCTCTAATAGATCCTGTGTTTGCCAGTGCTTCATTTCAAATTGCTTAAGTAAGAACAAATaGTTTGAGTGCTCAGCATGC +
Preference number: 5 (lower is better)
Translates to: RASFSNRSCVCQCFISNCLSKNK*FECSAC
Trigger: GCATGCTGAGCACTCAAACAATTTGTTCTTACTTAA...GCAATTTGAAATGAAGCACTGGCAAACACAGGATCTATTAGAGAAAGAAGCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGATTAGAAGACTGTTaGACATGGGATGATGTAGAC +
Preference number: 5 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLRLEDC*TWDDVD
Trigger: GTCTACATCATCCCATGTCAAACAGTCTTCTAATCT...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTTAAGGAATGCCGTCTaGAGGATTTTCTTCTATGGA +
Preference number: 5 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLLRNAV*RIFFYG
Trigger: TCCATAGAAGAAAATCCTCAAGACGGCATTCCTTAA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACAGAGTTGCTCTTTAGTTaGATTAAGTTGAGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTELLFS*IKLSLL
Trigger: AAGCAAGCTCAACTTAATCAAACTAAAGAGCAACTC...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TCATGTCATGAAACAGCATATCTTGAGATGATGTGTCTTGGGATAGTATGCCTTGAGTTGCTCTTTAGTTaGATTAAGTTGAGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: SCHETAYLEMMCLGIVCLELLFS*IKLSLL
Trigger: AAGCAAGCTCAACTTAATCAAACTAAAGAGCAACTC...AAGGCATACTATCCCAAGACACATCATCTCAAGATATGCTGTTTCATGACATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS-3UTR CAA 90 bp ATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCAGTGGAGTTGCTCTTTAGTTaGATTAAGTTGAGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: IGGGNIVFPNLIPLMGAVELLFS*IKLSLL
Trigger: AAGCAAGCTCAACTTAATCAAACTAAAGAGCAACTC...CACTGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CAGATTGGAGGAGGCAATATTGTTTTTCCCAATTTAATTCCATTAATGGGGGCATTGAACATTTTGGAATaGTCCTTTCGGGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: QIGGGNIVFPNLIPLMGALNILE*SFRGFL
Trigger: AAGAAATCCCCGAAAGGACAATTCCAAAATGTTCAA...TGCCCCCATTAATGGAATTAAATTGGGAAAAACAATATTGCCTCCTCCAATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAGCTTGAACATTTTGGAATaGTCCTTTCGGGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: LVLNLDWTNRLNMCLVLSLNILE*SFRGFL
Trigger: AAGAAATCCCCGAAAGGACAATTCCAAAATGTTCAA...GCTCAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGTCTGGATTGAAGGTCTaGTTGGTCTTTATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLSGLKV*LVFILS
Trigger: ACTCAAGATAAAGACCAACAAGACCTTCAATCCAGA...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTTCTGGATTGAAGGTCTaGTTGGTCTTTATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLSGLKV*LVFILS
Trigger: ACTCAAGATAAAGACCAACAAGACCTTCAATCCAGA...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGACATTAAGTAAGAACAAATaGTTTGAGTGCTCAGCATGC +
Preference number: 5 (lower is better)
Translates to: LCNSGLKVLLVFILSVLTLSKNK*FECSAC
Trigger: GCATGCTGAGCACTCAAACAATTTGTTCTTACTTAA...TGTCAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp CATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTGTACTGAAGGATACTTTGCTTTaGTTCATCTGGCACAAATTC +
Preference number: 5 (lower is better)
Translates to: HLVLNLDWTNRLNMCLVLKDTLL*FIWHKF
Trigger: GAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTT...CAGTACAAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp GTTGCACATCTTGTTCTGAATCTAGATTGGACAAATAGGCTAAACATGTGTCTTAAGGATACTTTGCTTTaGTTCATCTGGCACAAATTC +
Preference number: 5 (lower is better)
Translates to: VAHLVLNLDWTNRLNMCLKDTLL*FIWHKF
Trigger: GAATTTGTGCCAGATGAACAAAAGCAAAGTATCCTT...AAGACACATGTTTAGCCTATTTGTCCAATCTAGATTCAGAACAAGATGTGCAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS-3UTR CAA 90 bp TTTTTGTGTAACTCTGGATTGAAGGTCTTGTTGGTCTTTATCTTGAGTGTCTTGGTGCTTCATTTCAAATaGCCATTCTCGTGCTTTATA +
Preference number: 5 (lower is better)
Translates to: FLCNSGLKVLLVFILSVLVLHFK*PFSCFI
Trigger: TATAAAGCACGAGAATGGCAATTTGAAATGAAGCAC...CAAGACACTCAAGATAAAGACCAACAAGACCTTCAATCCAGAGTTACACAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
CDS CCA 72 bp ACCCTGTTCTCGCAGCCTGGTCCTGTGTGCTGTGGCTaGGGATCAGCTCACCTCTGGGGAGCGCTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: TLFSQPGPVCCG*GSAHLWGALSW
Trigger: CCAGCTGAGCGCTCCCCAGAGGTGAGCTGATCCCCAGCCACAGCACACAGGACCAGGCTGCGAGAACAGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531787.5
CDS TCA 72 bp AAGGGAAAGAGTGAGCAAACATTGCCGCCCAAATCATaGTCTACCTCTCCACCAGAGTCACATGGAGCCCTC +
Preference number: 6 (lower is better)
Translates to: KGKSEQTLPPKS*STSPPESHGAL
Trigger: GAGGGCTCCATGTGACTCTGGTGGAGAGGTAGATCATGATTTGGGCGGCAATGTTTGCTCACTCTTTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000526375.5
ENST00000527841.5
ENST00000530662.5
CDS CCA 72 bp GCCCGTGACACCTTGACCAATAAGTGCTCCCCAGAATaGATATCCTGTGAGGACAACAAGGGGAAGTCTTTG +
Preference number: 6 (lower is better)
Translates to: ARDTLTNKCSPE*ISCEDNKGKSL
Trigger: CAAAGACTTCCCCTTGTTGTCCTCACAGGATATCCATTCTGGGGAGCACTTATTGGTCAAGGTGTCACGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395001.5
ENST00000395005.6
ENST00000526375.5
ENST00000527841.5
ENST00000530662.5
CDS TCA 72 bp CGTGAGTTGCCCTTCTGTCCTGGGATGTTGACTCCATaGTTCTATGGCAGAACTCTAGTAAGGGAAAGAGTG +
Preference number: 6 (lower is better)
Translates to: RELPFCPGMLTP*FYGRTLVRERV
Trigger: CACTCTTTCCCTTACTAGAGTTCTGCCATAGAATCATGGAGTCAACATCCCAGGACAGAAGGGCAACTCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000526375.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531949.1
CDS CCA 72 bp CCGGAAGAAGCTGATCCTCTGATCATCTTGGGGCCGTaGATACTTGACACATTAAGGGATTATAGGAAGTGG +
Preference number: 6 (lower is better)
Translates to: PEEADPLIILGP*ILDTLRDYRKW
Trigger: CCACTTCCTATAATCCCTTAATGTGTCAAGTATCCACGGCCCCAAGATGATCAGAGGATCAGCTTCTTCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS CCA 72 bp GCCCTTCTGTCCTGGGATGTTGACTCCATGATTCTATaGCAGAACTCTAGTAAGGGAAAGAGTGAGCAAACA +
Preference number: 6 (lower is better)
Translates to: ALLSWDVDSMIL*QNSSKGKSEQT
Trigger: TGTTTGCTCACTCTTTCCCTTACTAGAGTTCTGCCATAGAATCATGGAGTCAACATCCCAGGACAGAAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000526375.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531949.1
CDS CAA 72 bp GGTTCAAAGCCGGAAGAAGCTGATCCTCTGATCATCTaGGGGCCGTGGATACTTGACACATTAAGGGATTAT +
Preference number: 6 (lower is better)
Translates to: GSKPEEADPLII*GPWILDTLRDY
Trigger: ATAATCCCTTAATGTGTCAAGTATCCACGGCCCCAAGATGATCAGAGGATCAGCTTCTTCCGGCTTTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525397.5
ENST00000527841.5
ENST00000530662.5
CDS CAA 90 bp TGCTCCCCAGAATGGATATCCTGTGAGGACAACAAGGGGAAGTCTTaGGGAGAAACCGATGTAATTAAGTGCAAATATAGTTCCAAAGCC +
Preference number: 6 (lower is better)
Translates to: CSPEWISCEDNKGKS*GETDVIKCKYSSKA
Trigger: GGCTTTGGAACTATATTTGCACTTAATTACATCGGTTTCTCCCAAAGACTTCCCCTTGTTGTCCTCACAGGATATCCATTCTGGGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000526375.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531949.1
ENST00000534688.2
CDS TCA 72 bp GTCAATACAGTTTCGTTTGGTTTTATAGTGATGACGTaGGTTGCCCTTCTGTCCTGGGATGTTGACTCCATG +
Preference number: 6 (lower is better)
Translates to: VNTVSFGFIVMT*VALLSWDVDSM
Trigger: CATGGAGTCAACATCCCAGGACAGAAGGGCAACTCACGTCATCACTATAAAACCAAACGAAACTGTATTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000526375.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531949.1
CDS CAA 72 bp TATTTCTTCAAAGGATGGCATCTGGCAGTACTTGTCTaGATGTCTGTAGCTGAGAATGGTGAAAGTAATCCC +
Preference number: 6 (lower is better)
Translates to: YFFKGWHLAVLV*MSVAENGESNP
Trigger: GGGATTACTTTCACCATTCTCAGCTACAGACATCAAGACAAGTACTGCCAGATGCCATCCTTTGAAGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000526375.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
ENST00000534688.2
CDS CAA 90 bp GAAAACACATATTTCTTCAAAGGATGGCATCTGGCAGTACTTGTCTaGATGTCTGTAGCTGAGAATGGTGAAAGTAATCCCAGTTATCGC +
Preference number: 6 (lower is better)
Translates to: ENTYFFKGWHLAVLV*MSVAENGESNPSYR
Trigger: GCGATAACTGGGATTACTTTCACCATTCTCAGCTACAGACATCAAGACAAGTACTGCCAGATGCCATCCTTTGAAGAAATATGTGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000300187.11
ENST00000395001.5
ENST00000395005.6
ENST00000525397.5
ENST00000526375.5
ENST00000527841.5
ENST00000530662.5
ENST00000531783.5
ENST00000531787.5
ENST00000534688.2