Pregenerated sensors for MRPS6 (Homo sapiens)
Ensembl gene IDs: ENSG00000243927Ensembl transcript IDs: ENST00000477091.5, ENST00000482679.1, ENST00000483977.5, ENST00000488492.5
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGTAGAGGACAGAGATCAAGAAAAAGCCGCGGTGTGGTAGCTACATaGGCATTTGGCAAGATGGGGCCAGAAAGCAGGCTGCCAAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: GRGQRSRKSRGVVAT*AFGKMGPESRLPRF Trigger: GAACCTTGGCAGCCTGCTTTCTGGCCCCATCTTGCCAAATGCCCATGTAGCTACCACACCGCGGCTTTTTCTTGATCTCTGTCCTCTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483977.5 |
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| CDS CCA 90 bp | ACAGAGATCAAGAAAAAGCCGCGGTGTGGTAGCTACATGGGCATTTaGCAAGATGGGGCCAGAAAGCAGGCTGCCAAGGTTCCCATGGTA | + |
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Preference number: 5 (lower is better) Translates to: TEIKKKPRCGSYMGI*QDGARKQAAKVPMV Trigger: TACCATGGGAACCTTGGCAGCCTGCTTTCTGGCCCCATCTTGCCAAATGCCCATGTAGCTACCACACCGCGGCTTTTTCTTGATCTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483977.5 |
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| CDS GCA 90 bp | ATCTCTAGAGAGATGCTGACAGGGCAGCTATTAAGTGGAAACGCCTaGTGCAAGGAGAAGGAAAGCTGTGGAAACCATCGGGGAGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: ISREMLTGQLLSGNA*CKEKESCGNHRGGS Trigger: GCTTCCTCCCCGATGGTTTCCACAGCTTTCCTTCTCCTTGCAGCAGGCGTTTCCACTTAATAGCTGCCCTGTCAGCATCTCTCTAGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483977.5 |
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| CDS TCA 90 bp | AGGCAGGAACTAATGAGTGGCTTCTTCAGAGCACCTCGGCCAGGCTaGATCAGTGCCAATCACTGTCAGTCCTTGTATCCCATGACTCAA | + |
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Preference number: 5 (lower is better) Translates to: RQELMSGFFRAPRPG*ISANHCQSLYPMTQ Trigger: TTGAGTCATGGGATACAAGGACTGACAGTGATTGGCACTGATTCAGCCTGGCCGAGGTGCTCTGAAGAAGCCACTCATTAGTTCCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000482679.1 ENST00000483977.5 |
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| CDS TCA 90 bp | AAATACACATTTCATAGTCACCTGCACAGACGGCTCTCTGAAGCCTaGGAAGGAGGTGAGATCAATAGAAAGGGTGGAGGGGGAGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: KYTFHSHLHRRLSEA*EGGEINRKGGGGEE Trigger: TTCCTCTCCCCCTCCACCCTTTCTATTGATCTCACCTCCTTCTCAGGCTTCAGAGAGCCGTCTGTGCAGGTGACTATGAAATGTGTATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000482679.1 ENST00000483977.5 |
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| CDS GCA 90 bp | ACTAATGAGTGGCTTCTTCAGAGCACCTCGGCCAGGCTGAATCAGTaGCAATCACTGTCAGTCCTTGTATCCCATGACTCAAAATTCAAA | + |
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Preference number: 5 (lower is better) Translates to: TNEWLLQSTSARLNQ*QSLSVLVSHDSKFK Trigger: TTTGAATTTTGAGTCATGGGATACAAGGACTGACAGTGATTGGCACTGATTCAGCCTGGCCGAGGTGCTCTGAAGAAGCCACTCATTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000482679.1 ENST00000483977.5 |
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| CDS CCA 90 bp | AGATACTTTATAAGGATAAGCCTGAAAACTGCAACGAATGCAATGTaGAGAATGAAGGCAAGATGTGGCGAAGAAGGGCACCACAATCTG | + |
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Preference number: 5 (lower is better) Translates to: RYFIRISLKTATNAM*RMKARCGEEGHHNL Trigger: CAGATTGTGGTGCCCTTCTTCGCCACATCTTGCCTTCATTCTCCACATTGCATTCGTTGCAGTTTTCAGGCTTATCCTTATAAAGTATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000482679.1 ENST00000483977.5 |
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| CDS GCA 72 bp | GCGGGACGGCGGGGACAGTGGGGACCTAGAAACTGCTaGGCCGGACGGCTCCCAGGCGGCGAAAGCACGGTC | + |
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Preference number: 6 (lower is better) Translates to: AGRRGQWGPRNC*AGRLPGGESTV Trigger: GACCGTGCTTTCGCCGCCTGGGAGCCGTCCGGCGCAGCAGTTTCTAGGTCCCCACTGTCCCCGCCGTCCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477091.5 |
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| CDS TCA 72 bp | AATTCCAGGAGAAGAGTATCTCGTTGGCAGGACACCTaGACTGCCCATCCCACCAAAACTGTAGCCAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: NSRRRVSRWQDT*TAHPTKTVARG Trigger: CCCCCTGGCTACAGTTTTGGTGGGATGGGCAGTTCAGGTGTCCTGCCAACGAGATACTCTTCTCCTGGAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000482679.1 ENST00000483977.5 |
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| CDS CCA 72 bp | AAGAAAAAGCCGCGGTGTGGTAGCTACATGGGCATTTaGCAAGATGGGGCCAGAAAGCAGGCTGCCAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: KKKPRCGSYMGI*QDGARKQAAKV Trigger: AACCTTGGCAGCCTGCTTTCTGGCCCCATCTTGCCAAATGCCCATGTAGCTACCACACCGCGGCTTTTTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483977.5 |
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| CDS TCA 72 bp | CTAATGAGTGGCTTCTTCAGAGCACCTCGGCCAGGCTaGATCAGTGCCAATCACTGTCAGTCCTTGTATCCC | + |
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Preference number: 6 (lower is better) Translates to: LMSGFFRAPRPG*ISANHCQSLYP Trigger: GGGATACAAGGACTGACAGTGATTGGCACTGATTCAGCCTGGCCGAGGTGCTCTGAAGAAGCCACTCATTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000482679.1 ENST00000483977.5 |
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| CDS GCA 72 bp | TGGCTTCTTCAGAGCACCTCGGCCAGGCTGAATCAGTaGCAATCACTGTCAGTCCTTGTATCCCATGACTCA | + |
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Preference number: 6 (lower is better) Translates to: WLLQSTSARLNQ*QSLSVLVSHDS Trigger: TGAGTCATGGGATACAAGGACTGACAGTGATTGGCACTGATTCAGCCTGGCCGAGGTGCTCTGAAGAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000482679.1 ENST00000483977.5 |
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| CDS TCA 72 bp | AAAGTAGCAGCAGTCTCTGGAGATACGAGGAATATCTaGAGAACCAGGCTTCGGAGAGTTCAGGGACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: KVAAVSGDTRNI*RTRLRRVQGPG Trigger: CCCTGGTCCCTGAACTCTCCGAAGCCTGGTTCTTCAGATATTCCTCGTATCTCCAGAGACTGCTGCTACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482679.1 |
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| CDS GCA 72 bp | AGCAGGTGGATGAGAAATACACATTTCATAGTCACCTaGACAGACGGCTCTCTGAAGCCTGAGAAGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SRWMRNTHFIVT*TDGSLKPEKEV Trigger: CACCTCCTTCTCAGGCTTCAGAGAGCCGTCTGTGCAGGTGACTATGAAATGTGTATTTCTCATCCACCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000482679.1 ENST00000483977.5 |
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| CDS CAA 72 bp | GACACGCTGAGTCTCAGATGCCATGGCTCCCCTAGGTaGACCTCTCCAGATGTAAATCTTAAGCTCAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: DTLSLRCHGSPR*TSPDVNLKLKA Trigger: TGCTTTGAGCTTAAGATTTACATCTGGAGAGGTCAACCTAGGGGAGCCATGGCATCTGAGACTCAGCGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000482679.1 ENST00000483977.5 |
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| CDS CAA 90 bp | TGGCAAACCAGGGCTCTTGGGCCAAATCTGGCTTGCTACCTGTATTaGCAAATAAAGTTGAACTGGAACACAGCCAACTCACACATCTGC | + |
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Preference number: 6 (lower is better) Translates to: WQTRALGPNLACYLY*QIKLNWNTANSHIC Trigger: GCAGATGTGTGAGTTGGCTGTGTTCCAGTTCAACTTTATTTGCAAATACAGGTAGCAAGCCAGATTTGGCCCAAGAGCCCTGGTTTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483977.5 |
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| CDS CAA 72 bp | AGGGCTCTTGGGCCAAATCTGGCTTGCTACCTGTATTaGCAAATAAAGTTGAACTGGAACACAGCCAACTCA | + |
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Preference number: 6 (lower is better) Translates to: RALGPNLACYLY*QIKLNWNTANS Trigger: TGAGTTGGCTGTGTTCCAGTTCAACTTTATTTGCAAATACAGGTAGCAAGCCAGATTTGGCCCAAGAGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483977.5 |
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| CDS CAA 90 bp | GCTCTTGGGCCAAATCTGGCTTGCTACCTGTATTTGCAAATAAAGTaGAACTGGAACACAGCCAACTCACACATCTGCATAGTGTCTATG | + |
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Preference number: 6 (lower is better) Translates to: ALGPNLACYLYLQIK*NWNTANSHICIVSM Trigger: CATAGACACTATGCAGATGTGTGAGTTGGCTGTGTTCCAGTTCAACTTTATTTGCAAATACAGGTAGCAAGCCAGATTTGGCCCAAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483977.5 |
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| CDS GCA 72 bp | AAAAGGGGGAAAGGATGGGTAATCAGACCCAAACTCTaGCCTCATGGAGCTTACAATCTAATAAAGGACAGA | + |
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Preference number: 6 (lower is better) Translates to: KRGKGWVIRPKL*PHGAYNLIKDR Trigger: TCTGTCCTTTATTAGATTGTAAGCTCCATGAGGGCAGAGTTTGGGTCTGATTACCCATCCTTTCCCCCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000482679.1 ENST00000483977.5 |
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| CDS CAA 72 bp | CTCTGGCTGTTCTCGATATACCTATCAACTGCCAACTaGTGCGGTTGTCGAATTCACTGTAATATGTATTCC | + |
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Preference number: 6 (lower is better) Translates to: LWLFSIYLSTAN*CGCRIHCNMYS Trigger: GGAATACATATTACAGTGAATTCGACAACCGCACAAGTTGGCAGTTGATAGGTATATCGAGAACAGCCAGAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000477091.5 ENST00000488492.5 |
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| CDS GCA 72 bp | TGGCTGTTCTCGATATACCTATCAACTGCCAACTTGTaGGGTTGTCGAATTCACTGTAATATGTATTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: WLFSIYLSTANL*GCRIHCNMYSS Trigger: AGAGGAATACATATTACAGTGAATTCGACAACCGCACAAGTTGGCAGTTGATAGGTATATCGAGAACAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000477091.5 ENST00000488492.5 |
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| CDS GCA 72 bp | ATAAAGTTGAACTGGAACACAGCCAACTCACACATCTaGATAGTGTCTATGGCTACTTCTGTGCTAAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: IKLNWNTANSHI*IVSMATSVLKV Trigger: TACCTTTAGCACAGAAGTAGCCATAGACACTATGCAGATGTGTGAGTTGGCTGTGTTCCAGTTCAACTTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483977.5 |
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| CDS CAA 72 bp | CCAAATCTGGCTTGCTACCTGTATTTGCAAATAAAGTaGAACTGGAACACAGCCAACTCACACATCTGCATA | + |
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Preference number: 6 (lower is better) Translates to: PNLACYLYLQIK*NWNTANSHICI Trigger: TATGCAGATGTGTGAGTTGGCTGTGTTCCAGTTCAACTTTATTTGCAAATACAGGTAGCAAGCCAGATTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483977.5 |
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