Pregenerated sensors for MRPS30-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000251141Ensembl transcript IDs: ENST00000503179.5, ENST00000503452.5, ENST00000505302.1, ENST00000505401.1, ENST00000505637.1, ENST00000508123.1, ENST00000508945.5, ENST00000514597.5, ENST00000656315.1, ENST00000659161.1
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTGCAGACAGCCGGCTTCTTGGCTCCTCACATGGCAGGAAGAAGGTaGGCAAGCTCTCTGGCCTCTTCTTACAAGGGCATTAATTACCTT | + |
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Preference number: 5 (lower is better) Translates to: LQTAGFLAPHMAGRR*ASSLASSYKGINYL Trigger: AAGGTAATTAATGCCCTTGTAAGAAGAGGCCAGAGAGCTTGCGCACCTTCTTCCTGCCATGTGAGGAGCCAAGAAGCCGGCTGTCTGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000503452.5 ENST00000505302.1 ENST00000514597.5 ENST00000656315.1 ENST00000659161.1 |
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| CDS CCA 90 bp | CGTTACCAGAAAGGGGTCTCGATCCACACCCCAAGAGAGGGTTCCTaGTTAACTAGTTCCAAATTCTGGAGAAATCAGTTAGAGAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: RYQKGVSIHTPREGS*LTSSKFWRNQLERN Trigger: GTTTCTCTCTAACTGATTTCTCCAGAATTTGGAACTAGTTAACCAGGAACCCTCTCTTGGGGTGTGGATCGAGACCCCTTTCTGGTAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505401.1 |
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| CDS GCA 90 bp | GCTTTTGAGGGAGGTCAGCATCATTGGTCTCAGCTACCATTTTCCTaGAGGATGTTTATAAATAGTTCCTGGCAAAGGAGGTTGCCGTAT | + |
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Preference number: 5 (lower is better) Translates to: AFEGGQHHWSQLPFS*RMFINSSWQRRLPY Trigger: ATACGGCAACCTCCTTTGCCAGGAACTATTTATAAACATCCTGCAGGAAAATGGTAGCTGAGACCAATGATGCTGACCTCCCTCAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505637.1 |
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| CDS CCA 90 bp | CCATTGACTAAACCACAAACATATACTTCTCACAGTTCTGGAAGTTaGAAAGCCAAGATGAGGATGCCAGTATGGCTAGCTTCTAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: PLTKPQTYTSHSSGS*KAKMRMPVWLASSE Trigger: CTCACTAGAAGCTAGCCATACTGGCATCCTCATCTTGGCTTTCCAACTTCCAGAACTGTGAGAAGTATATGTTTGTGGTTTAGTCAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000503452.5 ENST00000505302.1 ENST00000514597.5 ENST00000656315.1 ENST00000659161.1 |
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| CDS CCA 90 bp | CTTCAGAAATTCAGAAATGCAGCTTTTGAGGGAGGTCAGCATCATTaGTCTCAGCTACTAGAGTTGAAGATGATTCAGCCACTTTTATTC | + |
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Preference number: 5 (lower is better) Translates to: LQKFRNAAFEGGQHH*SQLLELKMIQPLLF Trigger: GAATAAAAGTGGCTGAATCATCTTCAACTCTAGTAGCTGAGACCAATGATGCTGACCTCCCTCAAAAGCTGCATTTCTGAATTTCTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503179.5 ENST00000505401.1 |
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| CDS CCA 90 bp | CTTCAGAAATTCAGAAATGCAGCTTTTGAGGGAGGTCAGCATCATTaGTCTCAGCTACCATTTTCCTGCAGGATGTTTATAAATAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: LQKFRNAAFEGGQHH*SQLPFSCRMFINSS Trigger: GGAACTATTTATAAACATCCTGCAGGAAAATGGTAGCTGAGACCAATGATGCTGACCTCCCTCAAAAGCTGCATTTCTGAATTTCTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505637.1 |
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| CDS TCA 90 bp | CTCGTTAAGATGAATGAAGCTAAAATCTTCATTTTCCTGATCCCTTaGTCTTTCTTATCCTTACGACATCACAGAGTACCTCTCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: LVKMNEAKIFIFLIP*SFLSLRHHRVPLIF Trigger: GAAGATGAGAGGTACTCTGTGATGTCGTAAGGATAAGAAAGATCAAGGGATCAGGAAAATGAAGATTTTAGCTTCATTCATCTTAACGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508123.1 |
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| CDS CCA 72 bp | GAGGGTCCTCTTGCAGGTTGCAGACAGCCGGCTTCTTaGCTCCTCACATGGCAGGAAGAAGGTGCGCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: EGPLAGCRQPAS*LLTWQEEGAQA Trigger: AGCTTGCGCACCTTCTTCCTGCCATGTGAGGAGCCAAGAAGCCGGCTGTCTGCAACCTGCAAGAGGACCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000503452.5 ENST00000505302.1 ENST00000514597.5 ENST00000656315.1 ENST00000659161.1 |
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| CDS TCA 72 bp | CTCTGGCCTCTTCTTACAAGGGCATTAATTACCTTCTaGAGGCTCCACCTCCAAACACCATCACATTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LWPLLTRALITF*RLHLQTPSHCF Trigger: GAAGCAATGTGATGGTGTTTGGAGGTGGAGCCTTCAGAAGGTAATTAATGCCCTTGTAAGAAGAGGCCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503452.5 ENST00000514597.5 |
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| CDS CAA 72 bp | GAGGGAGGTCAGCATCATTGGTCTCAGCTACTAGAGTaGAAGATGATTCAGCCACTTTTATTCCAGCCACTC | + |
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Preference number: 6 (lower is better) Translates to: EGGQHHWSQLLE*KMIQPLLFQPL Trigger: GAGTGGCTGGAATAAAAGTGGCTGAATCATCTTCAACTCTAGTAGCTGAGACCAATGATGCTGACCTCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503179.5 ENST00000505401.1 |
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| CDS GCA 72 bp | GGAGGTCAGCATCATTGGTCTCAGCTACCATTTTCCTaGAGGATGTTTATAAATAGTTCCTGGCAAAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GGQHHWSQLPFS*RMFINSSWQRR Trigger: CCTCCTTTGCCAGGAACTATTTATAAACATCCTGCAGGAAAATGGTAGCTGAGACCAATGATGCTGACCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505637.1 |
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| CDS CCA 72 bp | AAAGGGGTCTCGATCCACACCCCAAGAGAGGGTTCCTaGTTAACTAGTTCCAAATTCTGGAGAAATCAGTTA | + |
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Preference number: 6 (lower is better) Translates to: KGVSIHTPREGS*LTSSKFWRNQL Trigger: TAACTGATTTCTCCAGAATTTGGAACTAGTTAACCAGGAACCCTCTCTTGGGGTGTGGATCGAGACCCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505401.1 |
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| CDS TCA 72 bp | GACAGTTTGCCTTCAGAAATTCAGAAATGCAGCTTTTaGGGGAGGTCAGCATCATTGGTCTCAGCTACTAGA | + |
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Preference number: 6 (lower is better) Translates to: DSLPSEIQKCSF*GRSASLVSATR Trigger: TCTAGTAGCTGAGACCAATGATGCTGACCTCCCTCAAAAGCTGCATTTCTGAATTTCTGAAGGCAAACTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503179.5 ENST00000505401.1 |
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| CDS TCA 72 bp | GACAGTTTGCCTTCAGAAATTCAGAAATGCAGCTTTTaGGGGAGGTCAGCATCATTGGTCTCAGCTACCATT | + |
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Preference number: 6 (lower is better) Translates to: DSLPSEIQKCSF*GRSASLVSATI Trigger: AATGGTAGCTGAGACCAATGATGCTGACCTCCCTCAAAAGCTGCATTTCTGAATTTCTGAAGGCAAACTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505637.1 |
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| CDS CCA 72 bp | TTCAGAAATGCAGCTTTTGAGGGAGGTCAGCATCATTaGTCTCAGCTACTAGAGTTGAAGATGATTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: FRNAAFEGGQHH*SQLLELKMIQP Trigger: TGGCTGAATCATCTTCAACTCTAGTAGCTGAGACCAATGATGCTGACCTCCCTCAAAAGCTGCATTTCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503179.5 ENST00000505401.1 |
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| CDS CCA 72 bp | AGGCCATTTTCCTGCAGGATGTTTATAAATAGTTCCTaGCAAAGGAGGTTGCCGTATAGGGTCCTACAAGTA | + |
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Preference number: 6 (lower is better) Translates to: RPFSCRMFINSS*QRRLPYRVLQV Trigger: TACTTGTAGGACCCTATACGGCAACCTCCTTTGCCAGGAACTATTTATAAACATCCTGCAGGAAAATGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503179.5 |
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| CDS CAA 72 bp | AGACAGTTTGCCTTCAGAAATTCAGAAATGCAGCTTTaGAGGGAGGTCAGCATCATTGGTCTCAGCTACCAT | + |
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Preference number: 6 (lower is better) Translates to: RQFAFRNSEMQL*REVSIIGLSYH Trigger: ATGGTAGCTGAGACCAATGATGCTGACCTCCCTCAAAAGCTGCATTTCTGAATTTCTGAAGGCAAACTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505637.1 |
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| CDS CAA 90 bp | CTGATTTGGACAGTGCAGGAGGAGGTGGTGGTGATGCTCAATTTCTaGAGCAGATTGATTGTTACCTTGGTTAGTTCAATTTGTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: LIWTVQEEVVVMLNF*SRLIVTLVSSICAH Trigger: ATGAGCACAAATTGAACTAACCAAGGTAACAATCAATCTGCTCAAGAAATTGAGCATCACCACCACCTCCTCCTGCACTGTCCAAATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656315.1 |
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| CDS CCA 72 bp | GACTCATTTTCCTGCAGGATGTTTATAAATAGTTCCTaGCAAAGGAGGTTGCCGTATAGGGTCCTACAAGTA | + |
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Preference number: 6 (lower is better) Translates to: DSFSCRMFINSS*QRRLPYRVLQV Trigger: TACTTGTAGGACCCTATACGGCAACCTCCTTTGCCAGGAACTATTTATAAACATCCTGCAGGAAAATGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503452.5 ENST00000505302.1 ENST00000505401.1 |
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| CDS CCA 72 bp | AAACCACAAACATATACTTCTCACAGTTCTGGAAGTTaGAAAGCCAAGATGAGGATGCCAGTATGGCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: KPQTYTSHSSGS*KAKMRMPVWLA Trigger: AGCTAGCCATACTGGCATCCTCATCTTGGCTTTCCAACTTCCAGAACTGTGAGAAGTATATGTTTGTGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000503452.5 ENST00000505302.1 ENST00000514597.5 ENST00000656315.1 ENST00000659161.1 |
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| CDS CCA 72 bp | CTACCATTTTCCTGCAGGATGTTTATAAATAGTTCCTaGCAAAGGAGGTTGCCGTATAGGGTCCTACAAGTA | + |
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Preference number: 6 (lower is better) Translates to: LPFSCRMFINSS*QRRLPYRVLQV Trigger: TACTTGTAGGACCCTATACGGCAACCTCCTTTGCCAGGAACTATTTATAAACATCCTGCAGGAAAATGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505637.1 |
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| CDS CCA 72 bp | TTCAGAAATGCAGCTTTTGAGGGAGGTCAGCATCATTaGTCTCAGCTACCATTTTCCTGCAGGATGTTTATA | + |
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Preference number: 6 (lower is better) Translates to: FRNAAFEGGQHH*SQLPFSCRMFI Trigger: TATAAACATCCTGCAGGAAAATGGTAGCTGAGACCAATGATGCTGACCTCCCTCAAAAGCTGCATTTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505637.1 |
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| CDS CAA 72 bp | ATCCTTACGACATCACAGAGTACCTCTCATCTTCTCTaGATGTTTTGCATAACCTTCTGGGATATCCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: ILTTSQSTSHLL*MFCITFWDIPV Trigger: GACAGGGATATCCCAGAAGGTTATGCAAAACATCAAGAGAAGATGAGAGGTACTCTGTGATGTCGTAAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508123.1 |
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| CDS CAA 72 bp | ACAGTGCAGGAGGAGGTGGTGGTGATGCTCAATTTCTaGAGCAGATTGATTGTTACCTTGGTTAGTTCAATT | + |
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Preference number: 6 (lower is better) Translates to: TVQEEVVVMLNF*SRLIVTLVSSI Trigger: AATTGAACTAACCAAGGTAACAATCAATCTGCTCAAGAAATTGAGCATCACCACCACCTCCTCCTGCACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656315.1 |
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| CDS CAA 72 bp | GAGGAGGTGGTGGTGATGCTCAATTTCTTGAGCAGATaGATTGTTACCTTGGTTAGTTCAATTTGTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: EEVVVMLNFLSR*IVTLVSSICAH Trigger: ATGAGCACAAATTGAACTAACCAAGGTAACAATCAATCTGCTCAAGAAATTGAGCATCACCACCACCTCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656315.1 |
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| CDS GCA 72 bp | GATAGGGGTCTAGTTTCATTCTTCTGCATGTGGATCTaGCCTACAGGATATACTTTCATAATTCTAAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: DRGLVSFFCMWI*PTGYTFIILSG Trigger: ACCACTTAGAATTATGAAAGTATATCCTGTAGGGCAGATCCACATGCAGAAGAATGAAACTAGACCCCTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508123.1 |
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| CDS TCA 72 bp | TTTTCTACTGTTGGGCAAGGTGGGAAATGTGTATTCTaGCATATAGACTCCTCTCATCTTCTCTTGATGTTT | + |
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Preference number: 6 (lower is better) Translates to: FSTVGQGGKCVF*HIDSSHLLLMF Trigger: AAACATCAAGAGAAGATGAGAGGAGTCTATATGTCAGAATACACATTTCCCACCTTGCCCAACAGTAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514597.5 ENST00000659161.1 |
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| CDS GCA 72 bp | CTACAGAGAAGTGTATATTTAAAGAGGCCATTTTCCTaGAGGATGTTTATAAATAGTTCCTGGCAAAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LQRSVYLKRPFS*RMFINSSWQRR Trigger: CCTCCTTTGCCAGGAACTATTTATAAACATCCTGCAGGAAAATGGCCTCTTTAAATATACACTTCTCTGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503179.5 |
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| CDS CCA 72 bp | CCAAGAGAGGGTTCCTGGTTAACTAGTTCCAAATTCTaGAGAAATCAGTTAGAGAGAAACAAATATGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PREGSWLTSSKF*RNQLERNKYVP Trigger: TGGAACATATTTGTTTCTCTCTAACTGATTTCTCCAGAATTTGGAACTAGTTAACCAGGAACCCTCTCTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505401.1 |
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| CDS TCA 72 bp | TTTTCTACTGTTGGGCAAGGTGGGAAATGTGTATTCTaGCATATAGACTCATTTTCCTGCAGGATGTTTATA | + |
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Preference number: 6 (lower is better) Translates to: FSTVGQGGKCVF*HIDSFSCRMFI Trigger: TATAAACATCCTGCAGGAAAATGAGTCTATATGTCAGAATACACATTTCCCACCTTGCCCAACAGTAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503452.5 ENST00000505302.1 |
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| CDS TCA 72 bp | ATGAATGAAGCTAAAATCTTCATTTTCCTGATCCCTTaGTCTTTCTTATCCTTACGACATCACAGAGTACCT | + |
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Preference number: 6 (lower is better) Translates to: MNEAKIFIFLIP*SFLSLRHHRVP Trigger: AGGTACTCTGTGATGTCGTAAGGATAAGAAAGATCAAGGGATCAGGAAAATGAAGATTTTAGCTTCATTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508123.1 |
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| CDS TCA 72 bp | CTCTCTCTCTCTCTCTCACACACACACACACACACTTaGATAAATCATACTTATAGAATACTATGTAGCTAT | + |
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Preference number: 6 (lower is better) Translates to: LSLSLSHTHTHT*INHTYRILCSY Trigger: ATAGCTACATAGTATTCTATAAGTATGATTTATTCAAGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656315.1 |
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| CDS CAA 72 bp | ATTCTGACATATAGACTTTGTAAACTTCTTCAAAGCTaGGGCAAGAACACCAAGCATGTCAAAGTTCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: ILTYRLCKLLQS*GKNTKHVKVLV Trigger: AACAAGAACTTTGACATGCTTGGTGTTCTTGCCCAAGCTTTGAAGAAGTTTACAAAGTCTATATGTCAGAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508945.5 |
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