Pregenerated sensors for MRPL53 (Homo sapiens)
Ensembl gene IDs: ENSG00000204822Ensembl transcript IDs: ENST00000258105.8, ENST00000409710.1, ENST00000468875.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GGTAGCAGGGTTTTAAACTTTATTTTGCGCTCCGTGACCCTTCAGATAGTGATTTGCCCGCCGCGTCCCTaGCCCGGATGTGGGAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: GSRVLNFILRSVTLQIVICPPRP*PGCGRR Trigger: TCGCCTCCCACATCCGGGCCAGGGACGCGGCGGGCA...AATCACTATCTGAAGGGTCACGGAGCGCAAAATAAAGTTTAAAACCCTGCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000258105.8 ENST00000409710.1 |
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| CDS-3UTR CCA 90 bp | GGTAGCAGGGTTTTAAACTTTATTTTGCGCTCCGTGACCCTTCAGATAGTGATTTCCCTGGCCCGGATGTaGGAGGCGAAGGCGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: GSRVLNFILRSVTLQIVISLARM*EAKAVS Trigger: GCTCACCGCCTTCGCCTCCCACATCCGGGCCAGGGA...AATCACTATCTGAAGGGTCACGGAGCGCAAAATAAAGTTTAAAACCCTGCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000258105.8 ENST00000409710.1 |
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| CDS-3UTR TCA 90 bp | GGTAGCAGGGTTTTAAACTTTATTTTGCGCTCCGTGACCCTTCAGATAGTGATTGAACCCGAACCTGTTTaGCAGGCCGCAGACCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: GSRVLNFILRSVTLQIVIEPEPV*QAADQA Trigger: GGCTTGGTCTGCGGCCTGTCAAACAGGTTCGGGTTC...AATCACTATCTGAAGGGTCACGGAGCGCAAAATAAAGTTTAAAACCCTGCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000258105.8 ENST00000409710.1 |
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| CDS-3UTR TCA 90 bp | GGTAGCAGGGTTTTAAACTTTATTTTGCGCTCCGTGACCCTTCAGATAGTGATTTCCAGAGCGGTGAGATaGGCGCCGCGCATAATCAGG | + |
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Preference number: 4 (lower is better) Translates to: GSRVLNFILRSVTLQIVISRAVR*APRIIR Trigger: CCTGATTATGCGCGGCGCTCATCTCACCGCTCTGGA...AATCACTATCTGAAGGGTCACGGAGCGCAAAATAAAGTTTAAAACCCTGCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000258105.8 ENST00000409710.1 |
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| CDS-3UTR GCA 90 bp | GGTAGCAGGGTTTTAAACTTTATTTTGCGCTCCGTGACCCTTCAGATAGTGATTCGCATAATCAGGCGATaGCCGTCTCCTCGTCGATTC | + |
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Preference number: 4 (lower is better) Translates to: GSRVLNFILRSVTLQIVIRIIRR*PSPRRF Trigger: GAATCGACGAGGAGACGGGCATCGCCTGATTATGCG...AATCACTATCTGAAGGGTCACGGAGCGCAAAATAAAGTTTAAAACCCTGCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409710.1 |
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| CDS-3UTR TCA 90 bp | GGTAGCAGGGTTTTAAACTTTATTTTGCGCTCCGTGACCCTTCAGATAGTGATTTCGAAGGGACAGAACTaGACCCGAACCTGTTTGACA | + |
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Preference number: 4 (lower is better) Translates to: GSRVLNFILRSVTLQIVISKGQN*TRTCLT Trigger: TGTCAAACAGGTTCGGGTTCAGTTCTGTCCCTTCGA...AATCACTATCTGAAGGGTCACGGAGCGCAAAATAAAGTTTAAAACCCTGCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000258105.8 ENST00000409710.1 |
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| CDS-3UTR TCA 90 bp | GGTAGCAGGGTTTTAAACTTTATTTTGCGCTCCGTGACCCTTCAGATAGTGATTCACGTCCGCAATCACTaGGCAGTTGAGATTAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: GSRVLNFILRSVTLQIVIHVRNH*AVEISG Trigger: TCCACTAATCTCAACTGCTCAGTGATTGCGGACGTG...AATCACTATCTGAAGGGTCACGGAGCGCAAAATAAAGTTTAAAACCCTGCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000258105.8 |
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| CDS-3UTR CCA 90 bp | GGTAGCAGGGTTTTAAACTTTATTTTGCGCTCCGTGACCCTTCAGATAGTGATTCTAAAATCATCTTGTTaGTCTCTTTGGCGCTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GSRVLNFILRSVTLQIVILKSSC*SLWRCQ Trigger: CTGACAGCGCCAAAGAGACCAACAAGATGATTTTAG...AATCACTATCTGAAGGGTCACGGAGCGCAAAATAAAGTTTAAAACCCTGCTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000258105.8 ENST00000409710.1 |
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| CDS GCA 90 bp | CAGTGCTGGGGCTTAGGGGCGCGCGGGCTGCTCGCTGTTCCCTCCTaGCCGTCTCCACCAAGCCCACCGAACAGCACGTCCACGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: QCWGLGARGLLAVPS*PSPPSPPNSTSTQG Trigger: GCCCTGCGTGGACGTGCTGTTCGGTGGGCTTGGTGGAGACGGGCAGGAGGGAACAGCGAGCAGCCCGCGCGCCCCTAAGCCCCAGCACTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468875.1 |
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| CDS TCA 90 bp | GCCCGTCTCCTCGTCGATTCCACGTTTTTCTCGAAGGGACAGAACTaGACCCGAACCTGTTTGACAGGCCGCAGACCAAGCCGAGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: ARLLVDSTFFSKGQN*TRTCLTGRRPSRAK Trigger: CTTGGCTCGGCTTGGTCTGCGGCCTGTCAAACAGGTTCGGGTTCAGTTCTGTCCCTTCGAGAAAAACGTGGAATCGACGAGGAGACGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409710.1 |
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| CDS-3UTR CAA 90 bp | GGTAGCAGGGTTTTAAACTTTATTTTGCGCTCCGTGACCCTTCAGATAGTGATTGTATCAGCGCCCGGCTaGTCCCCGCTGCCCGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: GSRVLNFILRSVTLQIVIVSAPG*SPLPAA Trigger: CGCGGCGGGCAGCGGGGACAAGCCGGGCGCTGATAC...AATCACTATCTGAAGGGTCACGGAGCGCAAAATAAAGTTTAAAACCCTGCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000258105.8 ENST00000409710.1 |
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| CDS-3UTR CAA 90 bp | GGTAGCAGGGTTTTAAACTTTATTTTGCGCTCCGTGACCCTTCAGATAGTGATTGCAATCACTGAGCAGTaGAGATTAGTGGAGCGGACC | + |
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Preference number: 5 (lower is better) Translates to: GSRVLNFILRSVTLQIVIAITEQ*RLVERT Trigger: GGTCCGCTCCACTAATCTCAACTGCTCAGTGATTGC...AATCACTATCTGAAGGGTCACGGAGCGCAAAATAAAGTTTAAAACCCTGCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000258105.8 |
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| CDS-3UTR CAA 90 bp | GGTAGCAGGGTTTTAAACTTTATTTTGCGCTCCGTGACCCTTCAGATAGTGATTCACGCTAAAATCATCTaGTTGGTCTCTTTGGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: GSRVLNFILRSVTLQIVIHAKII*LVSLAL Trigger: CAGCGCCAAAGAGACCAACAAGATGATTTTAGCGTG...AATCACTATCTGAAGGGTCACGGAGCGCAAAATAAAGTTTAAAACCCTGCTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000258105.8 ENST00000409710.1 |
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| CDS-3UTR CAA 90 bp | GGTAGCAGGGTTTTAAACTTTATTTTGCGCTCCGTGACCCTTCAGATAGTGATTGCTAAAATCATCTTGTaGGTCTCTTTGGCGCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: GSRVLNFILRSVTLQIVIAKIIL*VSLALS Trigger: TGACAGCGCCAAAGAGACCAACAAGATGATTTTAGC...AATCACTATCTGAAGGGTCACGGAGCGCAAAATAAAGTTTAAAACCCTGCTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000258105.8 ENST00000409710.1 |
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| CDS-3UTR CAA 90 bp | GGTAGCAGGGTTTTAAACTTTATTTTGCGCTCCGTGACCCTTCAGATAGTGATTGTTTTAAACTTTATTTaGCGCTCCGTGACCCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: GSRVLNFILRSVTLQIVIVLNFI*RSVTLQ Trigger: CTGAAGGGTCACGGAGCGCAAAATAAAGTTTAAAAC...AATCACTATCTGAAGGGTCACGGAGCGCAAAATAAAGTTTAAAACCCTGCTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000258105.8 ENST00000409710.1 |
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| CDS GCA 72 bp | GGCTTAGGGGCGCGCGGGCTGCTCGCTGTTCCCTCCTaGCCGTCTCCACCAAGCCCACCGAACAGCACGTCC | + |
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Preference number: 6 (lower is better) Translates to: GLGARGLLAVPS*PSPPSPPNSTS Trigger: GGACGTGCTGTTCGGTGGGCTTGGTGGAGACGGGCAGGAGGGAACAGCGAGCAGCCCGCGCGCCCCTAAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468875.1 |
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