Pregenerated sensors for MRPL48 (Homo sapiens)
Ensembl gene IDs: ENSG00000175581Ensembl transcript IDs: ENST00000310614.12, ENST00000398483.7, ENST00000411840.6, ENST00000508278.6, ENST00000535277.5, ENST00000540162.5, ENST00000544140.5
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GACAGAGTGCAGGGAGGACTCCTGTGGAACATCCAAGTCGAGAAGGCCAGTAGATTTATTCTCCTGGAGTaGCTACCTGAACCACTCGCT | + |
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Preference number: 2 (lower is better) Translates to: DRVQGGLLWNIQVEKASRFILLE*LPEPLA Trigger: AGCGAGTGGTTCAGGTAGGCACTCCAGGAGAATAAA...TCTACTGGCCTTCTCGACTTGGATGTTCCACAGGAGTCCTCCCTGCACTCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544140.5 |
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| 3UTR-3UTR TCA 90 bp | TGCACCACGGTGCCTGGCCAGAATATAGAATCTCTTAAAGATACTCCACAGGATCAAGCCACAGAGGAGTaGGGACATTACTGGCTATGG | + |
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Preference number: 2 (lower is better) Translates to: CTTVPGQNIESLKDTPQDQATEE*GHYWLW Trigger: CCATAGCCAGTAATGTCCTCACTCCTCTGTGGCTTG...ATCCTGTGGAGTATCTTTAAGAGATTCTATATTCTGGCCAGGCACCGTGGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310614.12 ENST00000508278.6 |
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| 3UTR-3UTR TCA 90 bp | TGGGTATCAAGTTTCAAGCCTCAGCCAACAGATCAGGACTGGAGATATATACATCTGAGGCCTAAGGAATaGATGAGACTGCATAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: WVSSFKPQPTDQDWRYIHLRPKE*MRLHRG Trigger: CCCCCTATGCAGTCTCATTCATTCCTTAGGCCTCAG...ATGTATATATCTCCAGTCCTGATCTGTTGGCTGAGGCTTGAAACTTGATACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544140.5 |
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| 3UTR-3UTR GCA 90 bp | AGCCTCAGCCAACAGATCAGGACTGGAGATATATACATCTGGGGGTTATCAGTAGGTTTTGGTTGGCATTaGATAACTTTCCTCGACTTT | + |
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Preference number: 2 (lower is better) Translates to: SLSQQIRTGDIYIWGLSVGFGWH*ITFLDF Trigger: AAAGTCGAGGAAAGTTATGCAATGCCAACCAAAACC...TACTGATAACCCCCAGATGTATATATCTCCAGTCCTGATCTGTTGGCTGAGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544140.5 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGTATCAAGTTTCAAGCCTCAGCCAACAGATCAGGACTGGAGATATATACACACTTCTATGGTTTTaGTTGGCATTGCATAACTTT | + |
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Preference number: 2 (lower is better) Translates to: TGYQVSSLSQQIRTGDIYTLLWF*LALHNF Trigger: AAAGTTATGCAATGCCAACCAAAACCATAGAAGTGT...GTATATATCTCCAGTCCTGATCTGTTGGCTGAGGCTTGAAACTTGATACCCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544140.5 |
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| 3UTR-3UTR CAA 90 bp | GACAGAGTGCAGGGAGGACTCCTGTGGAACATCCAAGTCGAGAAGGCCAGTAGATGGTTTTGGTTGGCATaGCATAACTTTCCTCGACTT | + |
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Preference number: 3 (lower is better) Translates to: DRVQGGLLWNIQVEKASRWFWLA*HNFPRL Trigger: AAGTCGAGGAAAGTTATGCAATGCCAACCAAAACCA...TCTACTGGCCTTCTCGACTTGGATGTTCCACAGGAGTCCTCCCTGCACTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544140.5 |
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| CDS-3UTR GCA 90 bp | TGCACCACGGTGCCTGGCCAGAATATAGAATCTCTTAAAGATACTCCACAGGATCCGAAGACCGGACCCTaGAGCCGCGTTCCCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: CTTVPGQNIESLKDTPQDPKTGP*SRVPRA Trigger: CGCCCTGGGAACGCGGCTGCAGGGTCCGGTCTTCGG...ATCCTGTGGAGTATCTTTAAGAGATTCTATATTCTGGCCAGGCACCGTGGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310614.12 ENST00000508278.6 |
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| CDS-3UTR GCA 90 bp | AGCCTCAGCCAACAGATCAGGACTGGAGATATATACATCTGGGGGTTATCAGTACCGAAGACCGGACCCTaGAGCCGCGTTCCCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: SLSQQIRTGDIYIWGLSVPKTGP*SRVPRA Trigger: CGCCCTGGGAACGCGGCTGCAGGGTCCGGTCTTCGG...TACTGATAACCCCCAGATGTATATATCTCCAGTCCTGATCTGTTGGCTGAGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000544140.5 |
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| CDS-3UTR GCA 90 bp | TGCACCACGGTGCCTGGCCAGAATATAGAATCTCTTAAAGATACTCCACAGGATGTGGTGGCGGGCGCCTaGAGTCCCAGCTACTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: CTTVPGQNIESLKDTPQDVVAGA*SPSYLG Trigger: TCCCAAGTAGCTGGGACTGCAGGCGCCCGCCACCAC...ATCCTGTGGAGTATCTTTAAGAGATTCTATATTCTGGCCAGGCACCGTGGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310614.12 ENST00000508278.6 |
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| CDS-3UTR CCA 90 bp | TGCACCACGGTGCCTGGCCAGAATATAGAATCTCTTAAAGATACTCCACAGGATGCTGAGGCAGGAGAATaGTGTGAACCCGGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: CTTVPGQNIESLKDTPQDAEAGE*CEPGRQ Trigger: CTGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGC...ATCCTGTGGAGTATCTTTAAGAGATTCTATATTCTGGCCAGGCACCGTGGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310614.12 ENST00000508278.6 |
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| CDS-3UTR GCA 90 bp | TGCACCACGGTGCCTGGCCAGAATATAGAATCTCTTAAAGATACTCCACAGGATCCGGGAGGCAGAGCTTaGAGTGAGTCTAGATCGTGC | + |
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Preference number: 4 (lower is better) Translates to: CTTVPGQNIESLKDTPQDPGGRA*SESRSC Trigger: GCACGATCTAGACTCACTGCAAGCTCTGCCTCCCGG...ATCCTGTGGAGTATCTTTAAGAGATTCTATATTCTGGCCAGGCACCGTGGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310614.12 ENST00000508278.6 |
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| CDS-3UTR CCA 90 bp | GACAGAGTGCAGGGAGGACTCCTGTGGAACATCCAAGTCGAGAAGGCCAGTAGACCAACAGATCAGGACTaGAGATATATACATCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: DRVQGGLLWNIQVEKASRPTDQD*RYIHLG Trigger: CCCCAGATGTATATATCTCCAGTCCTGATCTGTTGG...TCTACTGGCCTTCTCGACTTGGATGTTCCACAGGAGTCCTCCCTGCACTCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544140.5 |
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| CDS-3UTR TCA 90 bp | TGCACCACGGTGCCTGGCCAGAATATAGAATCTCTTAAAGATACTCCACAGGATCTCAAACCGCTGATCTaGACCACTCGCTCATGGGTG | + |
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Preference number: 4 (lower is better) Translates to: CTTVPGQNIESLKDTPQDLKPLI*TTRSWV Trigger: CACCCATGAGCGAGTGGTTCAGATCAGCGGTTTGAG...ATCCTGTGGAGTATCTTTAAGAGATTCTATATTCTGGCCAGGCACCGTGGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310614.12 ENST00000508278.6 |
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| CDS-3UTR CCA 90 bp | TGCACCACGGTGCCTGGCCAGAATATAGAATCTCTTAAAGATACTCCACAGGATAGAATGTTGCCAGGCTaGTCTCAAGCTCCTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: CTTVPGQNIESLKDTPQDRMLPG*SQAPGL Trigger: GAGGCCAGGAGCTTGAGACCAGCCTGGCAACATTCT...ATCCTGTGGAGTATCTTTAAGAGATTCTATATTCTGGCCAGGCACCGTGGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310614.12 ENST00000508278.6 |
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| CDS-3UTR TCA 90 bp | TATCAAGTTTCAAGCCTCAGCCAACAGATCAGGACTGGAGATATATACATCTGGCTGAGGCCTAAGGAATaGATGAGACTGCATAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: YQVSSLSQQIRTGDIYIWLRPKE*MRLHRG Trigger: CCCCCTATGCAGTCTCATTCATTCCTTAGGCCTCAG...CCAGATGTATATATCTCCAGTCCTGATCTGTTGGCTGAGGCTTGAAACTTGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544140.5 |
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| CDS-3UTR GCA 90 bp | TGCACCACGGTGCCTGGCCAGAATATAGAATCTCTTAAAGATACTCCACAGGATGTAAAGACAGAATGTTaGCAGGCTGGTCTCAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: CTTVPGQNIESLKDTPQDVKTEC*QAGLKL Trigger: GAGCTTGAGACCAGCCTGGCAACATTCTGTCTTTAC...ATCCTGTGGAGTATCTTTAAGAGATTCTATATTCTGGCCAGGCACCGTGGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310614.12 ENST00000508278.6 |
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| CDS-3UTR GCA 90 bp | TGCACCACGGTGCCTGGCCAGAATATAGAATCTCTTAAAGATACTCCACAGGATAAGTCTTCTTCAGTGTaGTCCTTCACTGACAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: CTTVPGQNIESLKDTPQDKSSSV*SFTDSL Trigger: CAGACTGTCAGTGAAGGAGCACACTGAAGAAGACTT...ATCCTGTGGAGTATCTTTAAGAGATTCTATATTCTGGCCAGGCACCGTGGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310614.12 ENST00000508278.6 |
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| CDS-3UTR GCA 90 bp | ACTGGGTATCAAGTTTCAAGCCTCAGCCAACAGATCAGGACTGGAGATATATACTTTATTCTCCTGGAGTaGCTACCTGAACCACTCGCT | + |
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Preference number: 4 (lower is better) Translates to: TGYQVSSLSQQIRTGDIYFILLE*LPEPLA Trigger: AGCGAGTGGTTCAGGTAGGCACTCCAGGAGAATAAA...GTATATATCTCCAGTCCTGATCTGTTGGCTGAGGCTTGAAACTTGATACCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544140.5 |
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| CDS-3UTR GCA 90 bp | TGCACCACGGTGCCTGGCCAGAATATAGAATCTCTTAAAGATACTCCACAGGATGGTTTTGGTTGGCATTaGATAACTTTCCTCGACTTT | + |
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Preference number: 4 (lower is better) Translates to: CTTVPGQNIESLKDTPQDGFGWH*ITFLDF Trigger: AAAGTCGAGGAAAGTTATGCAATGCCAACCAAAACC...ATCCTGTGGAGTATCTTTAAGAGATTCTATATTCTGGCCAGGCACCGTGGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310614.12 ENST00000508278.6 |
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| CDS-3UTR GCA 90 bp | TGGGTATCAAGTTTCAAGCCTCAGCCAACAGATCAGGACTGGAGATATATACATGGTTTTGGTTGGCATTaGATAACTTTCCTCGACTTT | + |
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Preference number: 4 (lower is better) Translates to: WVSSFKPQPTDQDWRYIHGFGWH*ITFLDF Trigger: AAAGTCGAGGAAAGTTATGCAATGCCAACCAAAACC...ATGTATATATCTCCAGTCCTGATCTGTTGGCTGAGGCTTGAAACTTGATACCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544140.5 |
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| CDS-3UTR CCA 90 bp | TGCACCACGGTGCCTGGCCAGAATATAGAATCTCTTAAAGATACTCCACAGGATACACTTCTATGGTTTTaGTTGGCATTGCATAACTTT | + |
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Preference number: 4 (lower is better) Translates to: CTTVPGQNIESLKDTPQDTLLWF*LALHNF Trigger: AAAGTTATGCAATGCCAACCAAAACCATAGAAGTGT...ATCCTGTGGAGTATCTTTAAGAGATTCTATATTCTGGCCAGGCACCGTGGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310614.12 ENST00000508278.6 |
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| CDS-3UTR CCA 90 bp | TGGGTATCAAGTTTCAAGCCTCAGCCAACAGATCAGGACTGGAGATATATACATACACTTCTATGGTTTTaGTTGGCATTGCATAACTTT | + |
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Preference number: 4 (lower is better) Translates to: WVSSFKPQPTDQDWRYIHTLLWF*LALHNF Trigger: AAAGTTATGCAATGCCAACCAAAACCATAGAAGTGT...ATGTATATATCTCCAGTCCTGATCTGTTGGCTGAGGCTTGAAACTTGATACCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544140.5 |
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| CDS GCA 90 bp | GGCAGGAAATCCAGGGGGAGATGGCTAAGAGAAATCCTTAGCTTTTaGAGAGTTACAGACGTTGCTGAGGATCTGCTCAGTCATGAACCC | + |
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Preference number: 5 (lower is better) Translates to: GRKSRGRWLREILSF*RVTDVAEDLLSHEP Trigger: GGGTTCATGACTGAGCAGATCCTCAGCAACGTCTGTAACTCTGCAAAAGCTAAGGATTTCTCTTAGCCATCTCCCCCTGGATTTCCTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000411840.6 |
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| CDS TCA 90 bp | TGTTCCTCAGGCACAGCACATTTGGCAAATAATGACGAGGTTAGCTaGCTAAAGCAACTAAGGAGTCGGGAAGAGAACAGTGGCATCAGA | + |
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Preference number: 5 (lower is better) Translates to: CSSGTAHLANNDEVS*LKQLRSREENSGIR Trigger: TCTGATGCCACTGTTCTCTTCCCGACTCCTTAGTTGCTTTAGTCAGCTAACCTCGTCATTATTTGCCAAATGTGCTGTGCCTGAGGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398483.7 ENST00000535277.5 |
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| CDS-3UTR CAA 90 bp | TGCACCACGGTGCCTGGCCAGAATATAGAATCTCTTAAAGATACTCCACAGGATTGGTTTTGGTTGGCATaGCATAACTTTCCTCGACTT | + |
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Preference number: 5 (lower is better) Translates to: CTTVPGQNIESLKDTPQDWFWLA*HNFPRL Trigger: AAGTCGAGGAAAGTTATGCAATGCCAACCAAAACCA...ATCCTGTGGAGTATCTTTAAGAGATTCTATATTCTGGCCAGGCACCGTGGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310614.12 ENST00000508278.6 |
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| CDS GCA 90 bp | GAGAAATCCTTAGCTTTTGCAGAGTTACAGACGTTGCTGAGGATCTaGTCAGTCATGAACCCTCTTCATTTGGCAAATAATGACGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: EKSLAFAELQTLLRI*SVMNPLHLANNDEV Trigger: AACCTCGTCATTATTTGCCAAATGAAGAGGGTTCATGACTGAGCAGATCCTCAGCAACGTCTGTAACTCTGCAAAAGCTAAGGATTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411840.6 |
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| CDS-3UTR CAA 90 bp | TATCAAGTTTCAAGCCTCAGCCAACAGATCAGGACTGGAGATATATACATCTGGCCTCTACAACTAATTTaGCATAGACAGAGTGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: YQVSSLSQQIRTGDIYIWPLQLI*HRQSAG Trigger: CCCTGCACTCTGTCTATGCAAAATTAGTTGTAGAGG...CCAGATGTATATATCTCCAGTCCTGATCTGTTGGCTGAGGCTTGAAACTTGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544140.5 |
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| CDS-3UTR CAA 90 bp | TGGGTATCAAGTTTCAAGCCTCAGCCAACAGATCAGGACTGGAGATATATACATTGGTTTTGGTTGGCATaGCATAACTTTCCTCGACTT | + |
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Preference number: 5 (lower is better) Translates to: WVSSFKPQPTDQDWRYIHWFWLA*HNFPRL Trigger: AAGTCGAGGAAAGTTATGCAATGCCAACCAAAACCA...ATGTATATATCTCCAGTCCTGATCTGTTGGCTGAGGCTTGAAACTTGATACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544140.5 |
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| CDS TCA 72 bp | TGCTTGAACCCAGGAGTTCGAGGCTGCAGGGAGCTATaGTCATGCCACTGTACTCAAGCCTGGGCCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: CLNPGVRGCREL*SCHCTQAWATS Trigger: GCTTGTGGCCCAGGCTTGAGTACAGTGGCATGATCATAGCTCCCTGCAGCCTCGAACTCCTGGGTTCAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540162.5 |
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| CDS GCA 72 bp | TCCAGGGGGAGATGGCTAAGAGAAATCCTTAGCTTTTaGAGAGTTACAGACGTTGCTGAGGATCTGCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SRGRWLREILSF*RVTDVAEDLLS Trigger: ACTGAGCAGATCCTCAGCAACGTCTGTAACTCTGCAAAAGCTAAGGATTTCTCTTAGCCATCTCCCCCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000411840.6 |
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| CDS CCA 72 bp | CTGACTAAAGCAACTAAGGAGTCGGGAAGAGAACAGTaGCATCAGACGTCGAGAGGCCTTATATACCCATGT | + |
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Preference number: 6 (lower is better) Translates to: LTKATKESGREQ*HQTSRGLIYPC Trigger: ACATGGGTATATAAGGCCTCTCGACGTCTGATGCCACTGTTCTCTTCCCGACTCCTTAGTTGCTTTAGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000398483.7 ENST00000411840.6 ENST00000535277.5 |
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| CDS TCA 72 bp | GGCACAGCACATTTGGCAAATAATGACGAGGTTAGCTaGCTAAAGCAACTAAGGAGTCGGGAAGAGAACAGT | + |
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Preference number: 6 (lower is better) Translates to: GTAHLANNDEVS*LKQLRSREENS Trigger: ACTGTTCTCTTCCCGACTCCTTAGTTGCTTTAGTCAGCTAACCTCGTCATTATTTGCCAAATGTGCTGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398483.7 ENST00000535277.5 |
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| CDS GCA 72 bp | TTAGCTTTTGCAGAGTTACAGACGTTGCTGAGGATCTaGTCAGTCATGAACCCTCTTCATTTGGCAAATAAT | + |
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Preference number: 6 (lower is better) Translates to: LAFAELQTLLRI*SVMNPLHLANN Trigger: ATTATTTGCCAAATGAAGAGGGTTCATGACTGAGCAGATCCTCAGCAACGTCTGTAACTCTGCAAAAGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411840.6 |
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