Pregenerated sensors for MRPL36 (Homo sapiens)
Ensembl gene IDs: ENSG00000171421Ensembl transcript IDs: ENST00000508987.1, ENST00000510999.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCCGGAGGACACTGCGGCACCGGAGCCGGCCCTGCGCGCGGGCTGTaGGGTCGCGTTCGGGAGCCGCCAGTTCTCCCGCCCCGGGGTCGC | + |
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Preference number: 5 (lower is better) Translates to: PGGHCGTGAGPARGL*GRVREPPVLPPRGR Trigger: GCGACCCCGGGGCGGGAGAACTGGCGGCTCCCGAACGCGACCTCACAGCCCGCGCGCAGGGCCGGCTCCGGTGCCGCAGTGTCCTCCGGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510999.1 |
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| CDS GCA 90 bp | TGGGCCTGCAGGGCCCGGAGGACACTGCGGCACCGGAGCCGGCCCTaGGCGCGGGCTGTGAGGTCGCGTTCGGGAGCCGCCAGTTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: WACRARRTLRHRSRP*ARAVRSRSGAASSP Trigger: GGGAGAACTGGCGGCTCCCGAACGCGACCTCACAGCCCGCGCGCAGGGCCGGCTCCGGTGCCGCAGTGTCCTCCGGGCCCTGCAGGCCCA 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510999.1 |
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| CDS GCA 90 bp | TTCCCTTTCCCGCCTGCTGCAAGTGTAGGTGAGTGTGCAAAGCCCTaGGATGTTGAGGAGCCGCTCACTTGGCTGGGAGGGAGCTTAAAC | + |
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Preference number: 5 (lower is better) Translates to: FPFPPAASVGECAKP*DVEEPLTWLGGSLN Trigger: GTTTAAGCTCCCTCCCAGCCAAGTGAGCGGCTCCTCAACATCGCAGGGCTTTGCACACTCACCTACACTTGCAGCAGGCGGGAAAGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510999.1 |
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| CDS GCA 90 bp | TGCAGCCTCGACCTGAGCTTGAACACTGCCTTAATCAGCCAAGTGTaGCAGGAGAATAAGGGGCAGTGGACGGTGGCTTCCTTCCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: CSLDLSLNTALISQV*QENKGQWTVASFPF Trigger: GAAAGGGAAGGAAGCCACCGTCCACTGCCCCTTATTCTCCTGGCACACTTGGCTGATTAAGGCAGTGTTCAAGCTCAGGTCGAGGCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510999.1 |
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| CDS CCA 90 bp | GTAGGTGAGTGTGCAAAGCCCTGCGATGTTGAGGAGCCGCTCACTTaGCTGGGAGGGAGCTTAAACTTAGGCCGCATCCCTTTCCAAACA | + |
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Preference number: 5 (lower is better) Translates to: VGECAKPCDVEEPLT*LGGSLNLGRIPFQT Trigger: TGTTTGGAAAGGGATGCGGCCTAAGTTTAAGCTCCCTCCCAGCCAAGTGAGCGGCTCCTCAACATCGCAGGGCTTTGCACACTCACCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510999.1 |
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| CDS CCA 90 bp | AACACTGCCTTAATCAGCCAAGTGTGCCAGGAGAATAAGGGGCAGTaGACGGTGGCTTCCTTCCCTTTCCCGCCTGCTGCAAGTGTAGGT | + |
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Preference number: 5 (lower is better) Translates to: NTALISQVCQENKGQ*TVASFPFPPAASVG Trigger: ACCTACACTTGCAGCAGGCGGGAAAGGGAAGGAAGCCACCGTCCACTGCCCCTTATTCTCCTGGCACACTTGGCTGATTAAGGCAGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510999.1 |
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| CDS GCA 72 bp | AGGGCCCGGAGGACACTGCGGCACCGGAGCCGGCCCTaGGCGCGGGCTGTGAGGTCGCGTTCGGGAGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: RARRTLRHRSRP*ARAVRSRSGAA Trigger: GGCGGCTCCCGAACGCGACCTCACAGCCCGCGCGCAGGGCCGGCTCCGGTGCCGCAGTGTCCTCCGGGCCCT 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510999.1 |
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| CDS TCA 72 bp | CACTGCGGCACCGGAGCCGGCCCTGCGCGCGGGCTGTaGGGTCGCGTTCGGGAGCCGCCAGTTCTCCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: HCGTGAGPARGL*GRVREPPVLPP Trigger: GGGCGGGAGAACTGGCGGCTCCCGAACGCGACCTCACAGCCCGCGCGCAGGGCCGGCTCCGGTGCCGCAGTG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510999.1 |
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| CDS CCA 72 bp | CGCTCTCACCCGGCGCCGACCCCTGCGTCTGCGCACTaGCACGCGGACGCTGCTGCCAGGAAGGAAGATGGC | + |
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Preference number: 6 (lower is better) Translates to: RSHPAPTPASAH*HADAAARKEDG Trigger: GCCATCTTCCTTCCTGGCAGCAGCGTCCGCGTGCCAGTGCGCAGACGCAGGGGTCGGCGCCGGGTGAGAGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508987.1 |
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| CDS GCA 72 bp | CCGCCTGCTGCAAGTGTAGGTGAGTGTGCAAAGCCCTaGGATGTTGAGGAGCCGCTCACTTGGCTGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: PPAASVGECAKP*DVEEPLTWLGG Trigger: CCCTCCCAGCCAAGTGAGCGGCTCCTCAACATCGCAGGGCTTTGCACACTCACCTACACTTGCAGCAGGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510999.1 |
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| CDS CCA 72 bp | TGTGCAAAGCCCTGCGATGTTGAGGAGCCGCTCACTTaGCTGGGAGGGAGCTTAAACTTAGGCCGCATCCCT | + |
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Preference number: 6 (lower is better) Translates to: CAKPCDVEEPLT*LGGSLNLGRIP Trigger: AGGGATGCGGCCTAAGTTTAAGCTCCCTCCCAGCCAAGTGAGCGGCTCCTCAACATCGCAGGGCTTTGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510999.1 |
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