Pregenerated sensors for MRPL20-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272455Ensembl transcript IDs: ENST00000607307.1
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGAGAAACCTTGGACAATACCTGGCTTTCCTAGGCAGAGGACCCTaGGGCCTTCCGCAGTTTCTGTGTCCCTGGGTACTTGAGATTAGG | + |
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Preference number: 5 (lower is better) Translates to: GRNLGQYLAFLGRGP*GLPQFLCPWVLEIR Trigger: CCTAATCTCAAGTACCCAGGGACACAGAAACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAGCCAGGTATTGTCCAAGGTTTCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607307.1 |
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| CDS GCA 90 bp | TTTATACTGAGACATTCCATTGCCCAGGGACAGGCAGGAGACAGATaGCTTCCTCTTGTCTCAACTGCAAGAGGCATTCCTTCCTCTTAT | + |
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Preference number: 5 (lower is better) Translates to: FILRHSIAQGQAGDR*LPLVSTARGIPSSY Trigger: ATAAGAGGAAGGAATGCCTCTTGCAGTTGAGACAAGAGGAAGGCATCTGTCTCCTGCCTGTCCCTGGGCAATGGAATGTCTCAGTATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607307.1 |
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| CDS GCA 72 bp | CTTGGACAATACCTGGCTTTCCTAGGCAGAGGACCCTaGGGCCTTCCGCAGTTTCTGTGTCCCTGGGTACTT | + |
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Preference number: 6 (lower is better) Translates to: LGQYLAFLGRGP*GLPQFLCPWVL Trigger: AAGTACCCAGGGACACAGAAACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAGCCAGGTATTGTCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607307.1 |
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| CDS CCA 72 bp | GGGTTCAAGCAATTCTCCCACCTCAGCTGGGATTACTaGGGCCCGCTACCACGCCCGGCTACTTTTTGCATT | + |
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Preference number: 6 (lower is better) Translates to: GFKQFSHLSWDY*GPLPRPATFCI Trigger: AATGCAAAAAGTAGCCGGGCGTGGTAGCGGGCCCCAGTAATCCCAGCTGAGGTGGGAGAATTGCTTGAACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607307.1 |
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| CDS CAA 72 bp | ATACACATAAACATCTCAATGCTTTACAAAGCAGTATaGCTGCCCGCGGGTCCCACCTCCAGCCCTAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: IHINISMLYKAV*LPAGPTSSPKA Trigger: CGCCTTAGGGCTGGAGGTGGGACCCGCGGGCAGCAATACTGCTTTGTAAAGCATTGAGATGTTTATGTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607307.1 |
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| CDS GCA 72 bp | GAACATACAATCGGGTTTTATACTGAGACATTCCATTaGCCAGGGACAGGCAGGAGACAGATGCCTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: EHTIGFYTETFH*PGTGRRQMPSS Trigger: AGAGGAAGGCATCTGTCTCCTGCCTGTCCCTGGGCAATGGAATGTCTCAGTATAAAACCCGATTGTATGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607307.1 |
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| CDS TCA 72 bp | ATCTCAGTAGATGGAACATACAATCGGGTTTTATACTaGGACATTCCATTGCCCAGGGACAGGCAGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: ISVDGTYNRVLY*DIPLPRDRQET Trigger: TGTCTCCTGCCTGTCCCTGGGCAATGGAATGTCTCAGTATAAAACCCGATTGTATGTTCCATCTACTGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607307.1 |
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| CDS TCA 72 bp | ATGTCTACTTCTTTCTACACAGACACAGTAACAATCTaGTCTCTCTTGCTTTTCCCCACAGTGAGTGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: MSTSFYTDTVTI*SLLLFPTVSVP Trigger: GGGGACACTCACTGTGGGGAAAAGCAAGAGAGATCAGATTGTTACTGTGTCTGTGTAGAAAGAAGTAGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607307.1 |
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| CDS CAA 72 bp | GAGAGGGTCAGCAGACAAACACGTGAACAAAGGTCTTaGCATCATAGACAATGTAAAGGATTAAGTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: ERVSRQTREQRS*HHRQCKGLSAV Trigger: CACAGCACTTAATCCTTTACATTGTCTATGATGCAAAGACCTTTGTTCACGTGTTTGTCTGCTGACCCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607307.1 |
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