Pregenerated sensors for MRPL18 (Homo sapiens)
Ensembl gene IDs: ENSG00000112110Ensembl transcript IDs: ENST00000367034.5, ENST00000476826.5, ENST00000479638.5, ENST00000480842.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGAAAGGGGAGGAGGATGACCTTAACTACAAATAATATTCCACTGCAACATTATGTAAAACTTCCAAGCTaGCTGTTCTTCCAGATGCTC | + |
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Preference number: 2 (lower is better) Translates to: RKGRRMTLTTNNIPLQHYVKLPS*LFFQML Trigger: GAGCATCTGGAAGAACAGCCAGCTTGGAAGTTTTAC...ATAATGTTGCAGTGGAATATTATTTGTAGTTAAGGTCATCCTCCTCCCCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGGGGAGGAGGATGACCTTAACTACAAATAATATTCCACTGCAACATTATGATGGCTGTAGTGGCTaGCAGATTTATATTTACATG | + |
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Preference number: 2 (lower is better) Translates to: RKGRRMTLTTNNIPLQHYDGCSG*QIYIYM Trigger: CATGTAAATATAAATCTGTCAGCCACTACAGCCATC...ATAATGTTGCAGTGGAATATTATTTGTAGTTAAGGTCATCCTCCTCCCCTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| 3UTR CCA 72 bp | TTCCACTGCAACATTATTGCTGTAAAACTTCCAAGCTaGCTGTTCTTCCAGATGCTCTCTTTTGATGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: FHCNIIAVKLPS*LFFQMLSFDGC Trigger: ACAGCCATCAAAAGAGAGCATCTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCAGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| 3UTR-3UTR CAA 90 bp | AGAAAGGGGAGGAGGATGACCTTAACTACAAATAATATTCCACTGCAACATTATTCCAGATGCTCTCTTTaGATGGCTGTAGTGGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: RKGRRMTLTTNNIPLQHYSRCSL*MAVVAD Trigger: GTCAGCCACTACAGCCATCAAAAGAGAGCATCTGGA...ATAATGTTGCAGTGGAATATTATTTGTAGTTAAGGTCATCCTCCTCCCCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR TCA 90 bp | TGCAACATTATTGCTGTAAAACTTCCAAGCTGGCTGTTCTTCCAGATGCTCTCTCGGCTCGGAGCTGGTTaGCAGGGCTGCGAACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: CNIIAVKLPSWLFFQMLSRLGAG*QGCEPA Trigger: TGCAGGTTCGCAGCCCTGTCAACCAGCTCCGAGCCG...AGAGAGCATCTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR CCA 90 bp | AGAAAGGGGAGGAGGATGACCTTAACTACAAATAATATTCCACTGCAACATTATCTGCCGGCTCGGAGCTaGTTGACAGGGCTGCGAACC | + |
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Preference number: 4 (lower is better) Translates to: RKGRRMTLTTNNIPLQHYLPARS*LTGLRT Trigger: GGTTCGCAGCCCTGTCAACCAGCTCCGAGCCGGCAG...ATAATGTTGCAGTGGAATATTATTTGTAGTTAAGGTCATCCTCCTCCCCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR TCA 90 bp | AGAAAGGGGAGGAGGATGACCTTAACTACAAATAATATTCCACTGCAACATTATCCGAAGCGCCATCGCTaGGACGATCTCGGAAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: RKGRRMTLTTNNIPLQHYPKRHR*DDLGKA Trigger: GGCTTTTCCGAGATCGTCTCAGCGATGGCGCTTCGG...ATAATGTTGCAGTGGAATATTATTTGTAGTTAAGGTCATCCTCCTCCCCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR TCA 90 bp | AGAAAGGGGAGGAGGATGACCTTAACTACAAATAATATTCCACTGCAACATTATGGGGGTTCCGGTTGGTaGATTCTGGGGCGACAGCTT | + |
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Preference number: 4 (lower is better) Translates to: RKGRRMTLTTNNIPLQHYGGSGW*ILGRQL Trigger: AAGCTGTCGCCCCAGAATTCACCAACCGGAACCCCC...ATAATGTTGCAGTGGAATATTATTTGTAGTTAAGGTCATCCTCCTCCCCTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR GCA 90 bp | TGCAACATTATTGCTGTAAAACTTCCAAGCTGGCTGTTCTTCCAGATGCTCTCTGGACAAGCCTTTGGCTaGTGTAGATCCCCAAACTCT | + |
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Preference number: 4 (lower is better) Translates to: CNIIAVKLPSWLFFQMLSGQAFG*CRSPNS Trigger: AGAGTTTGGGGATCTACAGCAGCCAAAGGCTTGTCC...AGAGAGCATCTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR GCA 90 bp | AGAAAGGGGAGGAGGATGACCTTAACTACAAATAATATTCCACTGCAACATTATTGCACCCAGGGTTCCTaGAAACCGAGAACAACCCCC | + |
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Preference number: 4 (lower is better) Translates to: RKGRRMTLTTNNIPLQHYCTQGS*KPRTTP Trigger: GGGGGTTGTTCTCGGTTTGCAGGAACCCTGGGTGCA...ATAATGTTGCAGTGGAATATTATTTGTAGTTAAGGTCATCCTCCTCCCCTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR CCA 90 bp | TGCAACATTATTGCTGTAAAACTTCCAAGCTGGCTGTTCTTCCAGATGCTCTCTAGCCCCGCTCTTTCCTaGCTACAGATAAAAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: CNIIAVKLPSWLFFQMLSSPALS*LQIKAP Trigger: TGGAGCTTTTATCTGTAGCCAGGAAAGAGCGGGGCT...AGAGAGCATCTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR TCA 90 bp | TGCAACATTATTGCTGTAAAACTTCCAAGCTGGCTGTTCTTCCAGATGCTCTCTACAACCTTGCCATTCTaGTGCTCCACAAGTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: CNIIAVKLPSWLFFQMLSTTLPF*CSTSAS Trigger: AGAAGCACTTGTGGAGCATCAGAATGGCAAGGTTGT...AGAGAGCATCTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR GCA 90 bp | TGCAACATTATTGCTGTAAAACTTCCAAGCTGGCTGTTCTTCCAGATGCTCTCTCCGAAACCACAACCTTaGCATTCTGATGCTCCACAA | + |
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Preference number: 4 (lower is better) Translates to: CNIIAVKLPSWLFFQMLSPKPQP*HSDAPQ Trigger: TTGTGGAGCATCAGAATGGCAAGGTTGTGGTTTCGG...AGAGAGCATCTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR GCA 90 bp | AGAAAGGGGAGGAGGATGACCTTAACTACAAATAATATTCCACTGCAACATTATATAACTCGCAACCTGTaGCAGAACTCACGGGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RKGRRMTLTTNNIPLQHYITRNL*QNSREG Trigger: TCCCTCCCGTGAGTTCTGGCACAGGTTGCGAGTTAT...ATAATGTTGCAGTGGAATATTATTTGTAGTTAAGGTCATCCTCCTCCCCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR CCA 90 bp | TGCAACATTATTGCTGTAAAACTTCCAAGCTGGCTGTTCTTCCAGATGCTCTCTGTAAAACTTCCAAGCTaGCTGTTCTTCCAGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: CNIIAVKLPSWLFFQMLSVKLPS*LFFQML Trigger: GAGCATCTGGAAGAACAGCCAGCTTGGAAGTTTTAC...AGAGAGCATCTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR GCA 90 bp | ATATTCCACTGCAACATTATTGCTGTAAAACTTCCAAGCTGGCTGTTCTTCCAGGGCTGTTCTTCCAGATaGTCTCTTTTGATGGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: IFHCNIIAVKLPSWLFFQGCSSR*SLLMAV Trigger: TACAGCCATCAAAAGAGAGCATCTGGAAGAACAGCC...CTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCAGTGGAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR CCA 90 bp | AGAAAGGGGAGGAGGATGACCTTAACTACAAATAATATTCCACTGCAACATTATCCGGTTGGTGAATTCTaGGGCGACAGCTTCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: RKGRRMTLTTNNIPLQHYPVGEF*GDSFIF Trigger: GAAAATGAAGCTGTCGCCCCAGAATTCACCAACCGG...ATAATGTTGCAGTGGAATATTATTTGTAGTTAAGGTCATCCTCCTCCCCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR CCA 90 bp | ATATTCCACTGCAACATTATTGCTGTAAAACTTCCAAGCTGGCTGTTCTTCCAGCACCACCTTCTGTCATaGCACTTTGTAGTCGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: IFHCNIIAVKLPSWLFFQHHLLS*HFVVVS Trigger: TGAAACGACTACAAAGTGCCATGACAGAAGGTGGTG...CTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCAGTGGAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR TCA 90 bp | ATATTCCACTGCAACATTATTGCTGTAAAACTTCCAAGCTGGCTGTTCTTCCAGGATGGCTGTAGTGGCTaGCAGATTTATATTTACATG | + |
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Preference number: 4 (lower is better) Translates to: IFHCNIIAVKLPSWLFFQDGCSG*QIYIYM Trigger: CATGTAAATATAAATCTGTCAGCCACTACAGCCATC...CTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCAGTGGAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR GCA 90 bp | AGAAAGGGGAGGAGGATGACCTTAACTACAAATAATATTCCACTGCAACATTATCTGATGCTCCACAAGTaGTTCTACATGATGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: RKGRRMTLTTNNIPLQHYLMLHK*FYMMLS Trigger: ACTCAGCATCATGTAGAAGCACTTGTGGAGCATCAG...ATAATGTTGCAGTGGAATATTATTTGTAGTTAAGGTCATCCTCCTCCCCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR GCA 90 bp | ATATTCCACTGCAACATTATTGCTGTAAAACTTCCAAGCTGGCTGTTCTTCCAGCCACTGCAACATTATTaGTGTAAAACTTCCAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: IFHCNIIAVKLPSWLFFQPLQHY*CKTSKL Trigger: CAGCTTGGAAGTTTTACAGCAATAATGTTGCAGTGG...CTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCAGTGGAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR CCA 90 bp | TGCAACATTATTGCTGTAAAACTTCCAAGCTGGCTGTTCTTCCAGATGCTCTCTAAGCCACCACATTTCTaGTACTATAAAGGTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: CNIIAVKLPSWLFFQMLSKPPHF*YYKGAF Trigger: AAAAGCACCTTTATAGTACCAGAAATGTGGTGGCTT...AGAGAGCATCTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS TCA 90 bp | TTCCACAGGGTCCACTTCAGGTTTCGCTGCCGGCTCGGAGCTGGTTaGCAGGGCTGCGAACCTGCACCCAGGGTTCCTGCAAACCGAGAA | + |
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Preference number: 5 (lower is better) Translates to: FHRVHFRFRCRLGAG*QGCEPAPRVPANRE Trigger: TTCTCGGTTTGCAGGAACCCTGGGTGCAGGTTCGCAGCCCTGTCAACCAGCTCCGAGCCGGCAGCGAAACCTGAAGTGGACCCTGTGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS CCA 90 bp | CATTTTCCACAGGGTCCACTTCAGGTTTCGCTGCCGGCTCGGAGCTaGTTGACAGGGCTGCGAACCTGCACCCAGGGTTCCTGCAAACCG | + |
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Preference number: 5 (lower is better) Translates to: HFPQGPLQVSLPARS*LTGLRTCTQGSCKP Trigger: CGGTTTGCAGGAACCCTGGGTGCAGGTTCGCAGCCCTGTCAACCAGCTCCGAGCCGGCAGCGAAACCTGAAGTGGACCCTGTGGAAAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS TCA 90 bp | TTCCACAGGGTCCACTTCAGGTTTCGCTGCCGGCTCGGAGCTGGTTaGCAGGGCTGCGAACCTGCACCCCCGTCCTTAACTTCCTACTGT | + |
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Preference number: 5 (lower is better) Translates to: FHRVHFRFRCRLGAG*QGCEPAPPSLTSYC Trigger: ACAGTAGGAAGTTAAGGACGGGGGTGCAGGTTCGCAGCCCTGTCAACCAGCTCCGAGCCGGCAGCGAAACCTGAAGTGGACCCTGTGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000479638.5 ENST00000480842.1 |
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| CDS CCA 90 bp | CATTTTCCACAGGGTCCACTTCAGGTTTCGCTGCCGGCTCGGAGCTaGTTGACAGGGCTGCGAACCTGCACCCCCGTCCTTAACTTCCTA | + |
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Preference number: 5 (lower is better) Translates to: HFPQGPLQVSLPARS*LTGLRTCTPVLNFL Trigger: TAGGAAGTTAAGGACGGGGGTGCAGGTTCGCAGCCCTGTCAACCAGCTCCGAGCCGGCAGCGAAACCTGAAGTGGACCCTGTGGAAAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000479638.5 ENST00000480842.1 |
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| CDS GCA 90 bp | GCTGCGAACCTGCACCCTTTTCTAGAAGGCACTAGAATGGCCCACTaGGTCTGCGCAACATCGTTTGAGGCGAAGGTTCAACCTCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: AANLHPFLEGTRMAH*VCATSFEAKVQPLP Trigger: GGGAAGAGGTTGAACCTTCGCCTCAAACGATGTTGCGCAGACGCAGTGGGCCATTCTAGTGCCTTCTAGAAAAGGGTGCAGGTTCGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476826.5 |
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| CDS GCA 90 bp | CGAACCTGCACCCCCGTCCTTAACTTCCTACTGTGGTCTTCGCAGTaGCGCGAGCTCTATTTCGATCCGGCACGTCGAATACAAAATAGA | + |
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Preference number: 5 (lower is better) Translates to: RTCTPVLNFLLWSSQ*RELYFDPARRIQNR Trigger: TCTATTTTGTATTCGACGTGCCGGATCGAAATAGAGCTCGCGGCACTGCGAAGACCACAGTAGGAAGTTAAGGACGGGGGTGCAGGTTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000479638.5 ENST00000480842.1 |
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| CDS-3UTR CAA 90 bp | ATATTCCACTGCAACATTATTGCTGTAAAACTTCCAAGCTGGCTGTTCTTCCAGCCGGCTCGGAGCTGGTaGACAGGGCTGCGAACCTGC | + |
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Preference number: 5 (lower is better) Translates to: IFHCNIIAVKLPSWLFFQPARSW*TGLRTC Trigger: GCAGGTTCGCAGCCCTGTCAACCAGCTCCGAGCCGG...CTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCAGTGGAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR CAA 90 bp | TGCAACATTATTGCTGTAAAACTTCCAAGCTGGCTGTTCTTCCAGATGCTCTCTTTCCGGGGGTTCCGGTaGGTGAATTCTGGGGCGACA | + |
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Preference number: 5 (lower is better) Translates to: CNIIAVKLPSWLFFQMLSFRGFR*VNSGAT Trigger: TGTCGCCCCAGAATTCACCAACCGGAACCCCCGGAA...AGAGAGCATCTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR CAA 90 bp | TGCAACATTATTGCTGTAAAACTTCCAAGCTGGCTGTTCTTCCAGATGCTCTCTGTCAGGGACAAGCCTTaGGCTGCTGTAGATCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: CNIIAVKLPSWLFFQMLSVRDKP*AAVDPQ Trigger: TTGGGGATCTACAGCAGCCAAAGGCTTGTCCCTGAC...AGAGAGCATCTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS-3UTR CAA 90 bp | TGCAACATTATTGCTGTAAAACTTCCAAGCTGGCTGTTCTTCCAGATGCTCTCTTCCAGATGCTCTCTTTaGATGGCTGTAGTGGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: CNIIAVKLPSWLFFQMLSSRCSL*MAVVAD Trigger: GTCAGCCACTACAGCCATCAAAAGAGAGCATCTGGA...AGAGAGCATCTGGAAGAACAGCCAGCTTGGAAGTTTTACAGCAATAATGTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS CCA 72 bp | ACTGTGCAAGCCCAGGCGAGTGAGACTCCTGAGGCCTaGAGCAAAGCCGGCCGATCTGCCTCACGCTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: TVQAQASETPEA*SKAGRSASRSP Trigger: CGGGGAGCGTGAGGCAGATCGGCCGGCTTTGCTCCAGGCCTCAGGAGTCTCACTCGCCTGGGCTTGCACAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479638.5 |
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| CDS CCA 72 bp | CAGGGTCCACTTCAGGTTTCGCTGCCGGCTCGGAGCTaGTTGACAGGGCTGCGAACCTGCACCCCCGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: QGPLQVSLPARS*LTGLRTCTPVL Trigger: AAGGACGGGGGTGCAGGTTCGCAGCCCTGTCAACCAGCTCCGAGCCGGCAGCGAAACCTGAAGTGGACCCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000479638.5 ENST00000480842.1 |
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| CDS CAA 72 bp | GGTCCACTTCAGGTTTCGCTGCCGGCTCGGAGCTGGTaGACAGGGCTGCGAACCTGCACCCCCGTCCTTAAC | + |
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Preference number: 6 (lower is better) Translates to: GPLQVSLPARSW*TGLRTCTPVLN Trigger: GTTAAGGACGGGGGTGCAGGTTCGCAGCCCTGTCAACCAGCTCCGAGCCGGCAGCGAAACCTGAAGTGGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000479638.5 ENST00000480842.1 |
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| CDS TCA 72 bp | GTCCACTTCAGGTTTCGCTGCCGGCTCGGAGCTGGTTaGCAGGGCTGCGAACCTGCACCCCCGTCCTTAACT | + |
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Preference number: 6 (lower is better) Translates to: VHFRFRCRLGAG*QGCEPAPPSLT Trigger: AGTTAAGGACGGGGGTGCAGGTTCGCAGCCCTGTCAACCAGCTCCGAGCCGGCAGCGAAACCTGAAGTGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000479638.5 ENST00000480842.1 |
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| CDS CAA 90 bp | TTTCCACAGGGTCCACTTCAGGTTTCGCTGCCGGCTCGGAGCTGGTaGACAGGGCTGCGAACCTGCACCCAGGGTTCCTGCAAACCGAGA | + |
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Preference number: 6 (lower is better) Translates to: FPQGPLQVSLPARSW*TGLRTCTQGSCKPR Trigger: TCTCGGTTTGCAGGAACCCTGGGTGCAGGTTCGCAGCCCTGTCAACCAGCTCCGAGCCGGCAGCGAAACCTGAAGTGGACCCTGTGGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367034.5 |
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| CDS CAA 90 bp | TTTCCACAGGGTCCACTTCAGGTTTCGCTGCCGGCTCGGAGCTGGTaGACAGGGCTGCGAACCTGCACCCCCGTCCTTAACTTCCTACTG | + |
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Preference number: 6 (lower is better) Translates to: FPQGPLQVSLPARSW*TGLRTCTPVLNFLL Trigger: CAGTAGGAAGTTAAGGACGGGGGTGCAGGTTCGCAGCCCTGTCAACCAGCTCCGAGCCGGCAGCGAAACCTGAAGTGGACCCTGTGGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000479638.5 ENST00000480842.1 |
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| CDS TCA 72 bp | GTCCACTTCAGGTTTCGCTGCCGGCTCGGAGCTGGTTaGCAGGGCTGCGAACCTGCACCCTTTTCTAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: VHFRFRCRLGAG*QGCEPAPFSRR Trigger: CCTTCTAGAAAAGGGTGCAGGTTCGCAGCCCTGTCAACCAGCTCCGAGCCGGCAGCGAAACCTGAAGTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476826.5 |
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| CDS CCA 72 bp | CTGCGAACCTGCACCCCCGTCCTTAACTTCCTACTGTaGTCTTCGCAGTGCCGCGAGCTCTATTTCGATCCG | + |
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Preference number: 6 (lower is better) Translates to: LRTCTPVLNFLL*SSQCRELYFDP Trigger: CGGATCGAAATAGAGCTCGCGGCACTGCGAAGACCACAGTAGGAAGTTAAGGACGGGGGTGCAGGTTCGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000479638.5 ENST00000480842.1 |
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| CDS GCA 72 bp | ACCCCCGTCCTTAACTTCCTACTGTGGTCTTCGCAGTaGCGCGAGCTCTATTTCGATCCGGCACGTCGAATA | + |
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Preference number: 6 (lower is better) Translates to: TPVLNFLLWSSQ*RELYFDPARRI Trigger: TATTCGACGTGCCGGATCGAAATAGAGCTCGCGGCACTGCGAAGACCACAGTAGGAAGTTAAGGACGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000479638.5 ENST00000480842.1 |
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| CDS GCA 72 bp | GAATACAAAATAGAACCCGCACGTTCCAATGTACTGTaGAAGCCCAGGCGAGTGAGACTCCTGAGGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: EYKIEPARSNVL*KPRRVRLLRPG Trigger: TCCAGGCCTCAGGAGTCTCACTCGCCTGGGCTTGCACAGTACATTGGAACGTGCGGGTTCTATTTTGTATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479638.5 |
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| CDS CCA 72 bp | TCTGAGGTTCCCGTAGAACCACACCACCTTCTGTCATaGCACTTTGTAGTCGTTTCATCGAGTCTGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SEVPVEPHHLLS*HFVVVSSSLRL Trigger: CAGCCTCAGACTCGATGAAACGACTACAAAGTGCCATGACAGAAGGTGGTGTGGTTCTACGGGAACCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367034.5 ENST00000476826.5 ENST00000480842.1 |
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| CDS GCA 72 bp | CGAAACCACAACCTTGCCATTCTGATGCTCCACAAGTaGTTCTACATGATGCTGAGTCCTTATAACTCGCAA | + |
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Preference number: 6 (lower is better) Translates to: RNHNLAILMLHK*FYMMLSPYNSQ Trigger: TTGCGAGTTATAAGGACTCAGCATCATGTAGAAGCACTTGTGGAGCATCAGAATGGCAAGGTTGTGGTTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000367034.5 ENST00000476826.5 ENST00000479638.5 ENST00000480842.1 |
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