Pregenerated sensors for MROCKI (Homo sapiens)
Ensembl gene IDs: ENSG00000227502Ensembl transcript IDs: ENST00000434296.2, ENST00000670411.1
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTTGGCCACAGCTGTAGTTGTTTGGATAGCTGGGGGCTCCTGGGATaGCTAGAGTGGGATCATATGCCTGGAGTCTTCATTCTTCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: FGHSCSCLDSWGLLG*LEWDHMPGVFILLH Trigger: ATGGAGAAGAATGAAGACTCCAGGCATATGATCCCACTCTAGCCATCCCAGGAGCCCCCAGCTATCCAAACAACTACAGCTGTGGCCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS CCA 90 bp | AGCTGTAGTTGTTTGGATAGCTGGGGGCTCCTGGGATGGCTAGAGTaGGATCATATGCCTGGAGTCTTCATTCTTCTCCATTGGATGTTT | + |
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Preference number: 5 (lower is better) Translates to: SCSCLDSWGLLGWLE*DHMPGVFILLHWMF Trigger: AAACATCCAATGGAGAAGAATGAAGACTCCAGGCATATGATCCCACTCTAGCCATCCCAGGAGCCCCCAGCTATCCAAACAACTACAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS TCA 90 bp | ACTCAGCCATCAGCAGTCACTGGAGACGTATATGTTGGCACTTGGTaGAGCAGTACACTAAATAGAACATGTTGGTCAATAGGCAATACT | + |
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Preference number: 5 (lower is better) Translates to: TQPSAVTGDVYVGTW*SSTLNRTCWSIGNT Trigger: AGTATTGCCTATTGACCAACATGTTCTATTTAGTGTACTGCTTCACCAAGTGCCAACATATACGTCTCCAGTGACTGCTGATGGCTGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434296.2 |
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| CDS CCA 90 bp | ATTCTCATATATTATGTGAGGGACTGGTGGAAGGTAATTGAATCATaGGGGAAGGTCTTTCCCGTGCTGATAGTAGATAAGTGTCACGAG | + |
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Preference number: 5 (lower is better) Translates to: ILIYYVRDWWKVIES*GKVFPVLIVDKCHE Trigger: CTCGTGACACTTATCTACTATCAGCACGGGAAAGACCTTCCCCCATGATTCAATTACCTTCCACCAGTCCCTCACATAATATATGAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS TCA 90 bp | TTTCTGGGTGGGTCTGTGAGAGAATTTTCAGAAGAGACTAGCATTTaGAGCAGTAAACTGAGTACAGAAGAACCACCCTCATCAATATGG | + |
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Preference number: 5 (lower is better) Translates to: FLGGSVREFSEETSI*SSKLSTEEPPSSIW Trigger: CCATATTGATGAGGGTGGTTCTTCTGTACTCAGTTTACTGCTTCAAATGCTAGTCTCTTCTGAAAATTCTCTCACAGACCCACCCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS TCA 90 bp | CTTGCAGATGGGATGTTGTGGAACTTCTCACCCTCCATAATCATGTaGGCTGGCTTCCATAACAAATTCCCTCTTATATACCCATATATA | + |
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Preference number: 5 (lower is better) Translates to: LADGMLWNFSPSIIM*AGFHNKFPLIYPYI Trigger: TATATATGGGTATATAAGAGGGAATTTGTTATGGAAGCCAGCTCACATGATTATGGAGGGTGAGAAGTTCCACAACATCCCATCTGCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS GCA 72 bp | ACCATGATTGTGAGGCTTCCCCAGCCACACGTGGAATaGGGAGCCCAAAGTGTCCTTTGGCAGGATTACTTC | + |
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Preference number: 6 (lower is better) Translates to: TMIVRLPQPHVE*GAQSVLWQDYF Trigger: GAAGTAATCCTGCCAAAGGACACTTTGGGCTCCGCATTCCACGTGTGGCTGGGGAAGCCTCACAATCATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670411.1 |
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| CDS CAA 72 bp | CTGATACACGATGTTTTTGGCCACAGCTGTAGTTGTTaGGATAGCTGGGGGCTCCTGGGATGGCTAGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: LIHDVFGHSCSC*DSWGLLGWLEW Trigger: CCACTCTAGCCATCCCAGGAGCCCCCAGCTATCCAAACAACTACAGCTGTGGCCAAAAACATCGTGTATCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS CCA 72 bp | AGCTGTAGTTGTTTGGATAGCTGGGGGCTCCTGGGATaGCTAGAGTGGGATCATATGCCTGGAGTCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: SCSCLDSWGLLG*LEWDHMPGVFI Trigger: AATGAAGACTCCAGGCATATGATCCCACTCTAGCCATCCCAGGAGCCCCCAGCTATCCAAACAACTACAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS CAA 90 bp | TCTCCATTGGATGTTTGCTGGGATGAGAAGGTCCAAGATAGTCCTTaGATAATGTGTCGTGGTGCCTGGGCTGGGATGGCTGAAACACAG | + |
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Preference number: 6 (lower is better) Translates to: SPLDVCWDEKVQDSP*IMCRGAWAGMAETQ Trigger: CTGTGTTTCAGCCATCCCAGCCCAGGCACCACGACACATTATCAAAGGACTATCTTGGACCTTCTCATCCCAGCAAACATCCAATGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS CAA 90 bp | AGTTTGTCCCTGATACACGATGTTTTTGGCCACAGCTGTAGTTGTTaGGATAGCTGGGGGCTCCTGGGATGGCTAGAGTGGGATCATATG | + |
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Preference number: 6 (lower is better) Translates to: SLSLIHDVFGHSCSC*DSWGLLGWLEWDHM Trigger: CATATGATCCCACTCTAGCCATCCCAGGAGCCCCCAGCTATCCAAACAACTACAGCTGTGGCCAAAAACATCGTGTATCAGGGACAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS TCA 72 bp | CCCAGCACAAGCTCTTTTCCCTTGTCTGCTATCATGTaGGATGTGCCTTTCGCCTTCCACCATGATTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: PSTSSFPLSAIM*DVPFAFHHDCE Trigger: CTCACAATCATGGTGGAAGGCGAAAGGCACATCTCACATGATAGCAGACAAGGGAAAAGAGCTTGTGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS TCA 72 bp | CAATGGCCCCAGTTTCTCTGGCCTTCGGACTCAGACTaGATTACAACATTGGCTTCCTTGGTTGTACAGCTT | + |
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Preference number: 6 (lower is better) Translates to: QWPQFLWPSDSD*ITTLASLVVQL Trigger: AAGCTGTACAACCAAGGAAGCCAATGTTGTAATTCAGTCTGAGTCCGAAGGCCAGAGAAACTGGGGCCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS CCA 72 bp | CAGCCACACGTGGAATGCGGAGCCCAAAGTGTCCTTTaGCAGGATTACTTCACAGCATATACAATGAATGTC | + |
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Preference number: 6 (lower is better) Translates to: QPHVECGAQSVL*QDYFTAYTMNV Trigger: GACATTCATTGTATATGCTGTGAAGTAATCCTGCCAAAGGACACTTTGGGCTCCGCATTCCACGTGTGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670411.1 |
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| CDS CAA 72 bp | CCAGCCACACGTGGAATGCGGAGCCCAAAGTGTCCTTaGGCAGGATTACTTCACAGCATATACAATGAATGT | + |
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Preference number: 6 (lower is better) Translates to: PATRGMRSPKCP*AGLLHSIYNEC Trigger: ACATTCATTGTATATGCTGTGAAGTAATCCTGCCAAAGGACACTTTGGGCTCCGCATTCCACGTGTGGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670411.1 |
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| CDS TCA 72 bp | TTTGATAATGTGTCGTGGTGCCTGGGCTGGGATGGCTaGAACACAGGAGACCTAGCAGAAATTCTCTATACT | + |
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Preference number: 6 (lower is better) Translates to: FDNVSWCLGWDG*NTGDLAEILYT Trigger: AGTATAGAGAATTTCTGCTAGGTCTCCTGTGTTTCAGCCATCCCAGCCCAGGCACCACGACACATTATCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS CCA 72 bp | TTCTCTGGCCTTCGGACTCAGACTGAATTACAACATTaGCTTCCTTGGTTGTACAGCTTGCAGATGGGATGT | + |
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Preference number: 6 (lower is better) Translates to: FSGLRTQTELQH*LPWLYSLQMGC Trigger: ACATCCCATCTGCAAGCTGTACAACCAAGGAAGCCAATGTTGTAATTCAGTCTGAGTCCGAAGGCCAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS CCA 72 bp | TGGGATCATATGCCTGGAGTCTTCATTCTTCTCCATTaGATGTTTGCTGGGATGAGAAGGTCCAAGATAGTC | + |
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Preference number: 6 (lower is better) Translates to: WDHMPGVFILLH*MFAGMRRSKIV Trigger: GACTATCTTGGACCTTCTCATCCCAGCAAACATCCAATGGAGAAGAATGAAGACTCCAGGCATATGATCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS CCA 72 bp | CTTCGGACTCAGACTGAATTACAACATTGGCTTCCTTaGTTGTACAGCTTGCAGATGGGATGTTGTGGAACT | + |
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Preference number: 6 (lower is better) Translates to: LRTQTELQHWLP*LYSLQMGCCGT Trigger: AGTTCCACAACATCCCATCTGCAAGCTGTACAACCAAGGAAGCCAATGTTGTAATTCAGTCTGAGTCCGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS CAA 72 bp | ACTGAATTACAACATTGGCTTCCTTGGTTGTACAGCTaGCAGATGGGATGTTGTGGAACTTCTCACCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: TELQHWLPWLYS*QMGCCGTSHPP Trigger: TGGAGGGTGAGAAGTTCCACAACATCCCATCTGCAAGCTGTACAACCAAGGAAGCCAATGTTGTAATTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS CAA 90 bp | ATGGCTAGAGTGGGATCATATGCCTGGAGTCTTCATTCTTCTCCATaGGATGTTTGCTGGGATGAGAAGGTCCAAGATAGTCCTTTGATA | + |
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Preference number: 6 (lower is better) Translates to: MARVGSYAWSLHSSP*DVCWDEKVQDSPLI Trigger: TATCAAAGGACTATCTTGGACCTTCTCATCCCAGCAAACATCCAATGGAGAAGAATGAAGACTCCAGGCATATGATCCCACTCTAGCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS CAA 90 bp | AAGGGTTCCAATAGAATAAAAAGAGAAGGGCAAATTCTCTCCCTCTaGGGGCTGGGACATCCATCTTCTCCTGACTTCATTGAGCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: KGSNRIKREGQILSL*GLGHPSSPDFIELS Trigger: TGAAAGCTCAATGAAGTCAGGAGAAGATGGATGTCCCAGCCCCAAGAGGGAGAGAATTTGCCCTTCTCTTTTTATTCTATTGGAACCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS CCA 72 bp | GCCTGGAGTCTTCATTCTTCTCCATTGGATGTTTGCTaGGATGAGAAGGTCCAAGATAGTCCTTTGATAATG | + |
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Preference number: 6 (lower is better) Translates to: AWSLHSSPLDVC*DEKVQDSPLIM Trigger: CATTATCAAAGGACTATCTTGGACCTTCTCATCCCAGCAAACATCCAATGGAGAAGAATGAAGACTCCAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS TCA 72 bp | GGGATGTTGTGGAACTTCTCACCCTCCATAATCATGTaGGCTGGCTTCCATAACAAATTCCCTCTTATATAC | + |
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Preference number: 6 (lower is better) Translates to: GMLWNFSPSIIM*AGFHNKFPLIY Trigger: GTATATAAGAGGGAATTTGTTATGGAAGCCAGCTCACATGATTATGGAGGGTGAGAAGTTCCACAACATCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS TCA 72 bp | GGGTCTGTGAGAGAATTTTCAGAAGAGACTAGCATTTaGAGCAGTAAACTGAGTACAGAAGAACCACCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GSVREFSEETSI*SSKLSTEEPPS Trigger: TGAGGGTGGTTCTTCTGTACTCAGTTTACTGCTTCAAATGCTAGTCTCTTCTGAAAATTCTCTCACAGACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS GCA 72 bp | TATGCCTGGAGTCTTCATTCTTCTCCATTGGATGTTTaGTGGGATGAGAAGGTCCAAGATAGTCCTTTGATA | + |
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Preference number: 6 (lower is better) Translates to: YAWSLHSSPLDV*WDEKVQDSPLI Trigger: TATCAAAGGACTATCTTGGACCTTCTCATCCCAGCAAACATCCAATGGAGAAGAATGAAGACTCCAGGCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS TCA 72 bp | TCAGCAGTCACTGGAGACGTATATGTTGGCACTTGGTaGAGCAGTACACTAAATAGAACATGTTGGTCAATA | + |
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Preference number: 6 (lower is better) Translates to: SAVTGDVYVGTW*SSTLNRTCWSI Trigger: TATTGACCAACATGTTCTATTTAGTGTACTGCTTCACCAAGTGCCAACATATACGTCTCCAGTGACTGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434296.2 |
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| CDS CCA 72 bp | AGTAAACTGAGTACAGAAGAACCACCCTCATCAATATaGACAGGCATCATCCAATCTGTTAAGGGTTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: SKLSTEEPPSSI*TGIIQSVKGSN Trigger: ATTGGAACCCTTAACAGATTGGATGATGCCTGTCCATATTGATGAGGGTGGTTCTTCTGTACTCAGTTTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS CAA 90 bp | GCCACACGTGGAACTGTAAGTCCAATTAAACATTTCTTTTGTAAATaGCCCAGTCATGGGTATGTCTTTATCAACAGCATGAAAACAGAC | + |
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Preference number: 6 (lower is better) Translates to: ATRGTVSPIKHFFCK*PSHGYVFINSMKTD Trigger: GTCTGTTTTCATGCTGTTGATAAAGACATACCCATGACTGGGCAATTTACAAAAGAAATGTTTAATTGGACTTACAGTTCCACGTGTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434296.2 |
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| CDS TCA 72 bp | AATTTTCAGAAGAGACTAGCATTTGAAGCAGTAAACTaGGTACAGAAGAACCACCCTCATCAATATGGACAG | + |
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Preference number: 6 (lower is better) Translates to: NFQKRLAFEAVN*VQKNHPHQYGQ Trigger: CTGTCCATATTGATGAGGGTGGTTCTTCTGTACTCAGTTTACTGCTTCAAATGCTAGTCTCTTCTGAAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434296.2 ENST00000670411.1 |
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| CDS CCA 72 bp | TTACTTATAAGTGCTGTCATACGCCTAAATTTTAGTTaGGGTATCATGCTGAGAAGCCTTTCATTGTACACA | + |
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Preference number: 6 (lower is better) Translates to: LLISAVIRLNFS*GIMLRSLSLYT Trigger: TGTGTACAATGAAAGGCTTCTCAGCATGATACCCCAACTAAAATTTAGGCGTATGACAGCACTTATAAGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434296.2 |
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| CDS GCA 72 bp | GAGAGTCATGGCAACTTTTTCTTACCTTCGAATTACTaGATTGTAGTTACATTTAAGTGTCATCAAACATTG | + |
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Preference number: 6 (lower is better) Translates to: ESHGNFFLPSNY*IVVTFKCHQTL Trigger: CAATGTTTGATGACACTTAAATGTAACTACAATGCAGTAATTCGAAGGTAAGAAAAAGTTGCCATGACTCTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434296.2 |
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