Pregenerated sensors for MRGPRX2 (Homo sapiens)
Ensembl gene IDs: ENSG00000183695Ensembl transcript IDs: ENST00000329773.3
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGTCATGGACCGCAGAGTTGGCAAAGCTCTCATAGGGCTGTGGTaGAAGCCTGTGAGTAAGGCAGTTCCAGAGACACTGCACTTAGTG | + |
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Preference number: 1 (lower is better) Translates to: TVMDRRVGKALIGLW*KPVSKAVPETLHLV Trigger: CACTAAGTGCAGTGTCTCTGGAACTGCCTTACTCACAGGCTTCCACCACAGCCCTATGAGAGCTTTGCCAACTCTGCGGTCCATGACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| 3UTR CCA 90 bp | GGAACAGTCATGGACCGCAGAGTTGGCAAAGCTCTCATAGGGCTGTaGTGGAAGCCTGTGAGTAAGGCAGTTCCAGAGACACTGCACTTA | + |
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Preference number: 1 (lower is better) Translates to: GTVMDRRVGKALIGL*WKPVSKAVPETLHL Trigger: TAAGTGCAGTGTCTCTGGAACTGCCTTACTCACAGGCTTCCACCACAGCCCTATGAGAGCTTTGCCAACTCTGCGGTCCATGACTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| 3UTR CCA 90 bp | CAAAGGGGAAGGAATGGGAAGGCGTGTAGCTGGGATTTTAAGGGATaGCATGTGAAAGGAAACCACAGGAAGACAGTGTACCTCAAACTT | + |
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Preference number: 1 (lower is better) Translates to: QRGRNGKACSWDFKG*HVKGNHRKTVYLKL Trigger: AAGTTTGAGGTACACTGTCTTCCTGTGGTTTCCTTTCACATGCCATCCCTTAAAATCCCAGCTACACGCCTTCCCATTCCTTCCCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| 3UTR CCA 90 bp | AGATTAGAACAAAGGCAAAGGGGAAGGAATGGGAAGGCGTGTAGCTaGGATTTTAAGGGATGGCATGTGAAAGGAAACCACAGGAAGACA | + |
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Preference number: 1 (lower is better) Translates to: RLEQRQRGRNGKACS*DFKGWHVKGNHRKT Trigger: TGTCTTCCTGTGGTTTCCTTTCACATGCCATCCCTTAAAATCCCAGCTACACGCCTTCCCATTCCTTCCCCTTTGCCTTTGTTCTAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGGCGTGTAGCTGGGATTTTAAGGGATGGCATGTGAAAGGAAACCACAGGAGACAGGGGCAAAGTTaGCTCTCAAAGCCACATATA | + |
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Preference number: 2 (lower is better) Translates to: GKACSWDFKGWHVKGNHRRQGQS*LSKPHI Trigger: TATATGTGGCTTTGAGAGGCAACTTTGCCCCTGTCT...CCTGTGGTTTCCTTTCACATGCCATCCCTTAAAATCCCAGCTACACGCCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| 3UTR-3UTR GCA 90 bp | CAAAGGCAAAGGGGAAGGAATGGGAAGGCGTGTAGCTGGGATTTTAAGGGATGGAGATCTTTTCTGCCCTaGTTTCAGCCTTCTGCGAAA | + |
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Preference number: 2 (lower is better) Translates to: QRQRGRNGKACSWDFKGWRSFLP*FQPSAK Trigger: TTTCGCAGAAGGCTGAAAGCAGGGCAGAAAAGATCT...CCATCCCTTAAAATCCCAGCTACACGCCTTCCCATTCCTTCCCCTTTGCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| 3UTR CCA 72 bp | ATGGACCGCAGAGTTGGCAAAGCTCTCATAGGGCTGTaGTGGAAGCCTGTGAGTAAGGCAGTTCCAGAGACA | + |
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Preference number: 3 (lower is better) Translates to: MDRRVGKALIGL*WKPVSKAVPET Trigger: TGTCTCTGGAACTGCCTTACTCACAGGCTTCCACCACAGCCCTATGAGAGCTTTGCCAACTCTGCGGTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| 3UTR CCA 72 bp | TTCATTAAAAGTGGGAACAGTCATGGACCGCAGAGTTaGCAAAGCTCTCATAGGGCTGTGGTGGAAGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: FIKSGNSHGPQS*QSSHRAVVEAC Trigger: ACAGGCTTCCACCACAGCCCTATGAGAGCTTTGCCAACTCTGCGGTCCATGACTGTTCCCACTTTTAATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| 3UTR CCA 72 bp | AGGAATGGGAAGGCGTGTAGCTGGGATTTTAAGGGATaGCATGTGAAAGGAAACCACAGGAAGACAGTGTAC | + |
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Preference number: 3 (lower is better) Translates to: RNGKACSWDFKG*HVKGNHRKTVY Trigger: GTACACTGTCTTCCTGTGGTTTCCTTTCACATGCCATCCCTTAAAATCCCAGCTACACGCCTTCCCATTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR TCA 90 bp | GGAGTCTATAAGACCACTGGAAACTTCCAGGACGAATTAGAGAGCCCCCAGAGACGGCCCCGGCCAGGCTaGGGACGTAGACAGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: GVYKTTGNFQDELESPQRRPRPG*GRRQRR Trigger: CCTTCTCTGTCTACGTCCTCAGCCTGGCCGGGGCCG...TCTCTGGGGGCTCTCTAATTCGTCCTGGAAGTTTCCAGTGGTCTTATAGACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR TCA 90 bp | ACAGTCATGGACCGCAGAGTTGGCAAAGCTCTCATAGGGCTGTGGTGGAAGCCTATCTCCGGGGTGCCCTaGCGGAAGCATCCTTCACTG | + |
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Preference number: 4 (lower is better) Translates to: TVMDRRVGKALIGLWWKPISGVP*RKHPSL Trigger: CAGTGAAGGATGCTTCCGTCAGGGCACCCCGGAGAT...AGGCTTCCACCACAGCCCTATGAGAGCTTTGCCAACTCTGCGGTCCATGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR GCA 90 bp | GAACATGGAGTCTATAAGACCACTGGAAACTTCCAGGACGAATTAGAGAGCCCCTTGAGGATCGGCTGCTaGAGCCGCCACTGCTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: EHGVYKTTGNFQDELESPLRIGC*SRHCFL Trigger: TAGGAAGCAGTGGCGGCTGCAGCAGCCGATCCTCAA...GGGGCTCTCTAATTCGTCCTGGAAGTTTCCAGTGGTCTTATAGACTCCATGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR CCA 90 bp | GGGAAGGCGTGTAGCTGGGATTTTAAGGGATGGCATGTGAAAGGAAACCACAGGGCTCTCATAGGGCTGTaGTGGAAGCCTGTGAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: GKACSWDFKGWHVKGNHRALIGL*WKPVSK Trigger: CTTACTCACAGGCTTCCACCACAGCCCTATGAGAGC...CCTGTGGTTTCCTTTCACATGCCATCCCTTAAAATCCCAGCTACACGCCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR TCA 90 bp | ACAGTCATGGACCGCAGAGTTGGCAAAGCTCTCATAGGGCTGTGGTGGAAGCCTTTCTACTGGAGTTGGTaGGTTGAGAAGTGCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TVMDRRVGKALIGLWWKPFYWSW*VEKCFP Trigger: AGGAAAGCACTTCTCAACTCACCAACTCCAGTAGAA...AGGCTTCCACCACAGCCCTATGAGAGCTTTGCCAACTCTGCGGTCCATGACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR TCA 90 bp | CAAAGGCAAAGGGGAAGGAATGGGAAGGCGTGTAGCTGGGATTTTAAGGGATGGAAGCATCCTTCACTGTaGTCCACCTCAGCAATGTCC | + |
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Preference number: 4 (lower is better) Translates to: QRQRGRNGKACSWDFKGWKHPSL*STSAMS Trigger: GGACATTGCTGAGGTGGATCACAGTGAAGGATGCTT...CCATCCCTTAAAATCCCAGCTACACGCCTTCCCATTCCTTCCCCTTTGCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR CCA 90 bp | GAACATGGAGTCTATAAGACCACTGGAAACTTCCAGGACGAATTAGAGAGCCCCGTGCTTTCCTGGGACTaGCAAACAGCTGAGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: EHGVYKTTGNFQDELESPVLSWD*QTAEDG Trigger: CCCATCCTCAGCTGTTTGCCAGTCCCAGGAAAGCAC...GGGGCTCTCTAATTCGTCCTGGAAGTTTCCAGTGGTCTTATAGACTCCATGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR TCA 90 bp | GATTTTAAGGGATGGCATGTGAAAGGAAACCACAGGAAGACAGTGTACCTCAAAGGACTGGCAAACAGCTaGGGATGGGGAGATGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: DFKGWHVKGNHRKTVYLKGLANS*GWGDAC Trigger: GCAGGCATCTCCCCATCCTCAGCTGTTTGCCAGTCC...TTTGAGGTACACTGTCTTCCTGTGGTTTCCTTTCACATGCCATCCCTTAAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR GCA 90 bp | GAACATGGAGTCTATAAGACCACTGGAAACTTCCAGGACGAATTAGAGAGCCCCGGGTGGTTGGATCCATaGTCAGAAAACCTCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: EHGVYKTTGNFQDELESPGWLDP*SENLHW Trigger: CCAGTGGAGGTTTTCTGAGCATGGATCCAACCACCC...GGGGCTCTCTAATTCGTCCTGGAAGTTTCCAGTGGTCTTATAGACTCCATGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR GCA 90 bp | GATTTTAAGGGATGGCATGTGAAAGGAAACCACAGGAAGACAGTGTACCTCAAATCGACATCTCCGGGGTaGCCTGACGGAAGCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: DFKGWHVKGNHRKTVYLKSTSPG*PDGSIL Trigger: AAGGATGCTTCCGTCAGGGCACCCCGGAGATGTCGA...TTTGAGGTACACTGTCTTCCTGTGGTTTCCTTTCACATGCCATCCCTTAAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR CCA 90 bp | AGATTTATTAAGCTAGGGGGATATTCTAAGGTCTGCCAAAATGAAAGACGACTGTGGTCAGGTACAGCCTaGTCAGTGGCAGACCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RFIKLGGYSKVCQNERRLWSGTA*SVADPW Trigger: CCAGGGGTCTGCCACTGACCAGGCTGTACCTGACCA...CAGTCGTCTTTCATTTTGGCAGACCTTAGAATATCCCCCTAGCTTAATAAATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR TCA 90 bp | GATTTTAAGGGATGGCATGTGAAAGGAAACCACAGGAAGACAGTGTACCTCAAATGTGGTGGAAGCCTGTaGGTAAGGCAGTTCCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: DFKGWHVKGNHRKTVYLKCGGSL*VRQFQR Trigger: TCTCTGGAACTGCCTTACTCACAGGCTTCCACCACA...TTTGAGGTACACTGTCTTCCTGTGGTTTCCTTTCACATGCCATCCCTTAAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR GCA 90 bp | TCCAGAGACACTGCACTTAGTGTTTGTTTCATAGGCACTGTCTCACTTAATCCTGGATCAGGGTCTCCTTaGCACAAAGCAGAAGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SRDTALSVCFIGTVSLNPGSGSP*HKAEEG Trigger: CCCTTCTTCTGCTTTGTGGCAAGGAGACCCTGATCC...AGGATTAAGTGAGACAGTGCCTATGAAACAAACACTAAGTGCAGTGTCTCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR GCA 90 bp | ATAGGCACTGTCTCACTTAATCCTCACAAGGACTCTCTTAACTGTTTTAAAATCAGCTTGAGGATCGGCTaGTGCAGCCGCCACTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: IGTVSLNPHKDSLNCFKISLRIG*CSRHCF Trigger: GAAGCAGTGGCGGCTGCAGCAGCCGATCCTCAAGCT...GATTTTAAAACAGTTAAGAGAGTCCTTGTGAGGATTAAGTGAGACAGTGCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR GCA 90 bp | GGAGTCTATAAGACCACTGGAAACTTCCAGGACGAATTAGAGAGCCCCCAGAGAGGATATTCTAAGGTCTaGCAAAATGAAAGACGACTG | + |
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Preference number: 4 (lower is better) Translates to: GVYKTTGNFQDELESPQRGYSKV*QNERRL Trigger: CAGTCGTCTTTCATTTTGGCAGACCTTAGAATATCC...TCTCTGGGGGCTCTCTAATTCGTCCTGGAAGTTTCCAGTGGTCTTATAGACTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR CCA 90 bp | GATTTTAAGGGATGGCATGTGAAAGGAAACCACAGGAAGACAGTGTACCTCAAAGGGAAGGCGTGTAGCTaGGATTTTAAGGGATGGCAT | + |
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Preference number: 4 (lower is better) Translates to: DFKGWHVKGNHRKTVYLKGKACS*DFKGWH Trigger: ATGCCATCCCTTAAAATCCCAGCTACACGCCTTCCC...TTTGAGGTACACTGTCTTCCTGTGGTTTCCTTTCACATGCCATCCCTTAAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR TCA 90 bp | GAACATGGAGTCTATAAGACCACTGGAAACTTCCAGGACGAATTAGAGAGCCCCAACAGAAGAAGTTACTaGGGTACACCAGGCAATTTA | + |
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Preference number: 4 (lower is better) Translates to: EHGVYKTTGNFQDELESPNRRSY*GTPGNL Trigger: TAAATTGCCTGGTGTACCTCAGTAACTTCTTCTGTT...GGGGCTCTCTAATTCGTCCTGGAAGTTTCCAGTGGTCTTATAGACTCCATGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR GCA 90 bp | TCCAGAGACACTGCACTTAGTGTTTGTTTCATAGGCACTGTCTCACTTAATCCTAGACAGGGGCAAAGTTaGCTCTCAAAGCCACATATA | + |
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Preference number: 4 (lower is better) Translates to: SRDTALSVCFIGTVSLNPRQGQS*LSKPHI Trigger: TATATGTGGCTTTGAGAGGCAACTTTGCCCCTGTCT...AGGATTAAGTGAGACAGTGCCTATGAAACAAACACTAAGTGCAGTGTCTCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR CCA 90 bp | AGATTTATTAAGCTAGGGGGATATTCTAAGGTCTGCCAAAATGAAAGACGACTGTCAGAAAACCTCCACTaGTGCCCCTTAACACCCTTC | + |
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Preference number: 4 (lower is better) Translates to: RFIKLGGYSKVCQNERRLSENLH*CPLTPF Trigger: GAAGGGTGTTAAGGGGCACCAGTGGAGGTTTTCTGA...CAGTCGTCTTTCATTTTGGCAGACCTTAGAATATCCCCCTAGCTTAATAAATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR GCA 90 bp | TCTCTTAACTGTTTTAAAATCAGGACTGAGAAAGTTCAGCAAATCAGACAGACAATCTCTACACCAGACTaGTTCTCGACATCTCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: SLNCFKIRTEKVQQIRQTISTPD*FSTSPG Trigger: CCCCGGAGATGTCGAGAAGCAGTCTGGTGTAGAGAT...TGTCTGTCTGATTTGCTGAACTTTCTCAGTCCTGATTTTAAAACAGTTAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR GCA 90 bp | AGATTTATTAAGCTAGGGGGATATTCTAAGGTCTGCCAAAATGAAAGACGACTGAGATCTTTTCTGCCCTaGTTTCAGCCTTCTGCGAAA | + |
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Preference number: 4 (lower is better) Translates to: RFIKLGGYSKVCQNERRLRSFLP*FQPSAK Trigger: TTTCGCAGAAGGCTGAAAGCAGGGCAGAAAAGATCT...CAGTCGTCTTTCATTTTGGCAGACCTTAGAATATCCCCCTAGCTTAATAAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR CCA 90 bp | ATAGGCACTGTCTCACTTAATCCTCACAAGGACTCTCTTAACTGTTTTAAAATCAGCAGAAGAAGGGCTTaGTCATTTCCATTCACTGTT | + |
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Preference number: 4 (lower is better) Translates to: IGTVSLNPHKDSLNCFKISRRRA*SFPFTV Trigger: AACAGTGAATGGAAATGACCAAGCCCTTCTTCTGCT...GATTTTAAAACAGTTAAGAGAGTCCTTGTGAGGATTAAGTGAGACAGTGCCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR CCA 90 bp | TCTCTTAACTGTTTTAAAATCAGGACTGAGAAAGTTCAGCAAATCAGACAGACACTCAAATCTGGTAAATaGAGACTTTTCAGAGGTTTA | + |
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Preference number: 4 (lower is better) Translates to: SLNCFKIRTEKVQQIRQTLKSGK*RLFRGL Trigger: TAAACCTCTGAAAAGTCTCCATTTACCAGATTTGAG...TGTCTGTCTGATTTGCTGAACTTTCTCAGTCCTGATTTTAAAACAGTTAAGAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR CAA 90 bp | ACTGAGAAAGTTCAGCAAATCAGACAGACAGGGGCAAAGTTGCCTCTCAAAGCCCTCTGGAGAGCCAGCTaGAGGATCGGCTGCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TEKVQQIRQTGAKLPLKALWRAS*RIGCCS Trigger: GCTGCAGCAGCCGATCCTCAAGCTGGCTCTCCAGAG...GGCTTTGAGAGGCAACTTTGCCCCTGTCTGTCTGATTTGCTGAACTTTCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS TCA 90 bp | CACTGGTGCCCCTTAACACCCTTCTTTCTACTGGAGTTGGTGAGTTaGGAAGTGCTTTCCTGGGACTGGCAAACAGCTGAGGATGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: HWCPLTPFFLLELVS*EVLSWDWQTAEDGE Trigger: CTCCCCATCCTCAGCTGTTTGCCAGTCCCAGGAAAGCACTTCTCAACTCACCAACTCCAGTAGAAAGAAGGGTGTTAAGGGGCACCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR CAA 90 bp | CAAAGGCAAAGGGGAAGGAATGGGAAGGCGTGTAGCTGGGATTTTAAGGGATGGGGGATCAGGGTCTCCTaGCCACAAAGCAGAAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: QRQRGRNGKACSWDFKGWGIRVS*PQSRRR Trigger: CCTTCTTCTGCTTTGTGGCAAGGAGACCCTGATCCC...CCATCCCTTAAAATCCCAGCTACACGCCTTCCCATTCCTTCCCCTTTGCCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR CAA 90 bp | GGAGTCTATAAGACCACTGGAAACTTCCAGGACGAATTAGAGAGCCCCCAGAGAAAGCAGAAGAAGGGCTaGGTCATTTCCATTCACTGT | + |
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Preference number: 5 (lower is better) Translates to: GVYKTTGNFQDELESPQRKQKKG*VISIHC Trigger: ACAGTGAATGGAAATGACCAAGCCCTTCTTCTGCTT...TCTCTGGGGGCTCTCTAATTCGTCCTGGAAGTTTCCAGTGGTCTTATAGACTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS-3UTR CAA 90 bp | TCCAGAGACACTGCACTTAGTGTTTGTTTCATAGGCACTGTCTCACTTAATCCTCAGACAGGGGCAAAGTaGCCTCTCAAAGCCACATAT | + |
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Preference number: 5 (lower is better) Translates to: SRDTALSVCFIGTVSLNPQTGAK*PLKATY Trigger: ATATGTGGCTTTGAGAGGCAACTTTGCCCCTGTCTG...AGGATTAAGTGAGACAGTGCCTATGAAACAAACACTAAGTGCAGTGTCTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS GCA 72 bp | ATCTCTACACCAGACTGCTTCTCGACATCTCCGGGGTaGCCTGACGGAAGCATCCTTCACTGTGATCCACCT | + |
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Preference number: 6 (lower is better) Translates to: ISTPDCFSTSPG*PDGSILHCDPP Trigger: AGGTGGATCACAGTGAAGGATGCTTCCGTCAGGGCACCCCGGAGATGTCGAGAAGCAGTCTGGTGTAGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS CAA 72 bp | AAAGCAGAAGAAGGGCTTGGTCATTTCCATTCACTGTaGTACTTTCTGTTCCCCAGGCCGGGGTGGTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: KAEEGLGHFHSL*YFLFPRPGWLD Trigger: ATCCAACCACCCCGGCCTGGGGAACAGAAAGTACAACAGTGAATGGAAATGACCAAGCCCTTCTTCTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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| CDS CAA 72 bp | GATCAGGGTCTCCTTGCCACAAAGCAGAAGAAGGGCTaGGTCATTTCCATTCACTGTTGTACTTTCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: DQGLLATKQKKG*VISIHCCTFCS Trigger: GGAACAGAAAGTACAACAGTGAATGGAAATGACCAAGCCCTTCTTCTGCTTTGTGGCAAGGAGACCCTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329773.3 |
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