RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000011028

Ensembl transcript IDs: ENST00000303375.10, ENST00000446119.2, ENST00000579432.1, ENST00000580916.1, ENST00000583597.5, ENST00000584265.1, ENST00000584682.1

Found 571 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTaGCCTCTTGGAAGGGTACTGGGCCACTCCAGGGCTCGGGTGCTG +
Preference number: 1 (lower is better)
Translates to: LSHQDGPHTLSWLGL*PLGRVLGHSRARVL
Trigger: CAGCACCCGAGCCCTGGAGTGGCCCAGTACCCTTCCAAGAGGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR CCA 90 bp AAGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTaGGATCCCGACGGTTCAGGCCGATCCAGAACCAGTGCTGCTCGT +
Preference number: 1 (lower is better)
Translates to: KRTLRRRSSANSDPL*DPDGSGRSRTSAAR
Trigger: ACGAGCAGCACTGGTTCTGGATCGGCCTGAACCGTCGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
3UTR CCA 90 bp GTCTTCGAGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATaGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCTCTTGGAAG +
Preference number: 1 (lower is better)
Translates to: VFESMFTLSHAVAPG*AAYFVLAGTVASWK
Trigger: CTTCCAAGAGGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACTCGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTGCGGATCAACAGGCCTaGGCCGGGGGCTCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAADQQA*AGGSGE
Trigger: CTCCCCAGAGCCCCCGGCCCAGGCCTGTTGATCCGC...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCAGGCTCCTCGGGCTCTaGAAAGAAGGGGGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPRLLGL*KEGGPG
Trigger: CCCAGGACCCCCTTCTTTGCAGAGCCCGAGGAGCCT...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCAAAGAAGGGGGTCCTaGGGCGCGGATCAACAGGCC +
Preference number: 2 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAQRRGS*GADQQA
Trigger: GGCCTGTTGATCCGCGCCCCAGGACCCCCTTCTTTG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTACCACACCCGTGCCCTaGTTCTCAGGCCCAACCCAC +
Preference number: 2 (lower is better)
Translates to: GAEPSPARQEMTSQPGPATTPVP*FSGPTH
Trigger: GTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGT...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCACCCTGGGAGGTTaGGGTGTCTCTCCCCAGTCT +
Preference number: 2 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAPTLGG*GVSPQS
Trigger: AGACTGGGGAGAGACACCCCAACCTCCCAGGGTGGG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR GCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCACCAGCCCAGGCTCTaGCCAGCTCCGGCTCCCAAC +
Preference number: 2 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLHQPRL*PAPAPN
Trigger: GTTGGGAGCCGGAGCTGGGCAGAGCCTGGGCTGGTG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTGCTGAGGCTGCCAGGTaGGAAGAGAGACACAACAGA +
Preference number: 2 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAAEAAR*EERHNR
Trigger: TCTGTTGTGTCTCTCTTCCCACCTGGCAGCCTCAGC...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCTGGACAGGCAGCTGGTaGGGGGCCAGACTGACCCAG +
Preference number: 2 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGWTGSW*GARLTQ
Trigger: CTGGGTCAGTCTGGCCCCCCACCAGCTGCCTGTCCA...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCTGGACAGGCAGCTGGTaGGGGGCCAGACTGACCCAG +
Preference number: 2 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAWTGSW*GARLTQ
Trigger: CTGGGTCAGTCTGGCCCCCCACCAGCTGCCTGTCCA...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCTCAGCCCAGCCCTTGTaGGAGGGTGGCACCCCACCA +
Preference number: 2 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVASAQPL*EGGTPP
Trigger: TGGTGGGGTGCCACCCTCCCACAAGGGCTGGGCTGA...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGCCCAGCTCCCACCCTaGGAGGTTGGGGTGTCTCTC +
Preference number: 2 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAAQLPP*EVGVSL
Trigger: GAGAGACACCCCAACCTCCCAGGGTGGGAGCTGGGC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGGGCCCCCAGGACTCTaGCAACCCTTCCCCTTGCTC +
Preference number: 2 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAGPPGL*QPFPLL
Trigger: GAGCAAGGGGAAGGGTTGCCAGAGTCCTGGGGGCCC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCTCTTGGAAGGGTACTaGGCCACTCCAGGGCTCGGG +
Preference number: 2 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWLLEGY*ATPGLG
Trigger: CCCGAGCCCTGGAGTGGCCCAGTACCCTTCCAAGAG...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR TCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGCCGCCCGGCAGGAGATaGCATCCCAGCCCGGCCCAG +
Preference number: 2 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLPPGRR*HPSPAQ
Trigger: CTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGG...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR TCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGGATCCACTAGAGGGTaGACTCTGGGCCCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAGSTRG*TLGPPR
Trigger: TCTGGGAGGGCCCAGAGTTCACCCTCTAGTGGATCC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR GCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGAGACACAACAGATCTaGCCGAGGGGACAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAETQQI*PRGQGR
Trigger: CCTCCCCTGTCCCCTCGGGCAGATCTGTTGTGTCTC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCCAAAGAAGGGGGTCCTaGGGCGCGGATCAACAGGCC +
Preference number: 2 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPQRRGS*GADQQA
Trigger: GGCCTGTTGATCCGCGCCCCAGGACCCCCTTCTTTG...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCTAGAGGGTGAACTCTaGGCCCTCCCAGACTCCTGC +
Preference number: 2 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWLEGEL*ALPDSC
Trigger: GCAGGAGTCTGGGAGGGCCCAGAGTTCACCCTCTAG...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCTAGAGGGTGAACTCTaGGCCCTCCCAGACTCCTGC +
Preference number: 2 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVALEGEL*ALPDSC
Trigger: GCAGGAGTCTGGGAGGGCCCAGAGTTCACCCTCTAG...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR GCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCACAGGAGTGATGGATaGTCAGCCCCCTCAGCTGAC +
Preference number: 2 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWHRSDG*SAPSAD
Trigger: GTCAGCTGAGGGGGCTGAGCATCCATCACTCCTGTG...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGCGGATCAACAGGCCTaGGCCGGGGGCTCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLADQQA*AGGSGE
Trigger: CTCCCCAGAGCCCCCGGCCCAGGCCTGTTGATCCGC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCGCTGAGGCTGCCAGGTaGGAAGAGAGACACAACAGA +
Preference number: 2 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGAEAAR*EERHNR
Trigger: TCTGTTGTGTCTCTCTTCCCACCTGGCAGCCTCAGC...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR GCA 90 bp TGTGGTAAGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGCCGATCCAGAACCAGTaGTGCTCGTGGATCTCGGGT +
Preference number: 2 (lower is better)
Translates to: CGKRTLRRRSSANSDPLWPIQNQ*CSWISG
Trigger: ACCCGAGATCCACGAGCAGCACTGGTTCTGGATCGG...CCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCTTACCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
3UTR-3UTR GCA 90 bp AATTGTGGTAAGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCATCCAGAACCAGTGCTaGTCGTGGATCTCGGGTTCT +
Preference number: 2 (lower is better)
Translates to: NCGKRTLRRRSSANSDPLIQNQC*SWISGS
Trigger: AGAACCCGAGATCCACGAGCAGCACTGGTTCTGGAT...GAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCTTACCACAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
3UTR CAA 90 bp AATCAACTACAGAGAAAGGGCCATGTCTTCGAGTCCATGTTCACATaGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTG +
Preference number: 2 (lower is better)
Translates to: NQLQRKGHVFESMFT*SHAVAPGWAAYFVL
Trigger: CAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACTCGAAGACATGGCCCTTTCTCTGTAGTTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CAA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCGTCTCAGCCCAGCCCTaGTGGGAGGGTGGCACCCCA +
Preference number: 3 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPVSAQP*WEGGTP
Trigger: TGGGGTGCCACCCTCCCACAAGGGCTGGGCTGAGAC...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR CCA 72 bp CTTATCTCCAGCCCAGCAGACACCACACCCGTGCCCTaGTTCTCAGGCCCAACCCACCTAGGCCCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: LISSPADTTPVP*FSGPTHLGPSC
Trigger: GCAGGAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCTGGGCTGGAGATAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR CCA 72 bp CTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTaGGATCCCGACGGTTCAGGCCGATCCAGAACCAGT +
Preference number: 3 (lower is better)
Translates to: LRRRSSANSDPL*DPDGSGRSRTS
Trigger: ACTGGTTCTGGATCGGCCTGAACCGTCGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
3UTR CCA 72 bp TCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATaGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCC +
Preference number: 3 (lower is better)
Translates to: SMFTLSHAVAPG*AAYFVLAGTVA
Trigger: GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR-3UTR CAA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGTTAGGGAACTTATTTaGGTCCCCACAGGGGACTCT +
Preference number: 3 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLVRELI*VPTGDS
Trigger: AGAGTCCCCTGTGGGGACCAAAATAAGTTCCCTAAC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCATGGCGCTGCCAGTaGCCAGCGCCACGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAPWRCQ*PAPRSP
Trigger: GGGGCTGCGTGGCGCTGGCCACTGGCAGCGCCATGG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCACAGCCCCATGGCGCTaGCAGTGGCCAGCGCCACGC +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPTAPWR*QWPAPR
Trigger: GCGTGGCGCTGGCCACTGGCAGCGCCATGGGGCTGT...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCGGTGGGGCTGGAGCTaGTGCGGCTGTAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPARWGWS*CGCSGH
Trigger: GTGCCCGCTACAGCCGCAGCAGCTCCAGCCCCACCG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCCTCCCGCCCTGGCCCTaGCCACGCGCCTGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPLPPWP*PRAWLY
Trigger: ATAGAGCCAGGCGCGTGGGCAGGGCCAGGGCGGGAG...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCTCCCACAGCCCCATaGCGCTGCCAGTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAPPTAP*RCQWPA
Trigger: CGCTGGCCACTGGCAGCGCCATGGGGCTGTGGGAGG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTTGTGGCTCAGCATGCTaGGGCCCAAGCCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPACGSAC*GPSPGA
Trigger: GGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACA...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCGTGGCACACCACAGGTaGCCATCCTCGCGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPVAHHR*PSSRPV
Trigger: CACGGGCCGCGAGGATGGTCACCTGTGGTGTGCCAC...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCCGTCCCAGCGGCCAGTaGAGTGGGCTGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPRPSGQ*SGLRGC
Trigger: ACAGCCCCTCAGCCCACTTCACTGGCCGCTGGGACG...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCTCGGGCAGCCTGCGTaGGGAAGGCCTGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPALGQPA*GRPGCR
Trigger: CCTACACCCAGGCCTTCCTCACGCAGGCTGCCCGAG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCATCCTCGCGGCCCGTaGTGGTGCAGCCGTGGAACC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAHPRGP*WCSRGT
Trigger: GGTTCCACGGCTGCACCAGCACGGGCCGCGAGGATG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCAGATCCGCACCCTGCTaGTCGCAGCTGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPRSAPC*SQLAQA
Trigger: GGCCTGGGCCAGCTGCGAGCAGCAGGGTGCGGATCT...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCTGGCCCTGGAAGGGCTaGCAGCTCGGCTCGCACTCC +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPWPWKG*QLGSHS
Trigger: GGAGTGCGAGCCGAGCTGGCAGCCCTTCCAGGGCCA...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTAGGCCGATCCACCAGTaGTGCTCCTGGGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPARPIHQ*CSWARE
Trigger: CTCCCGGGCCCAGGAGCAGCACTGGTGGATCGGCCT...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTTGGGGCTGGAGCTGCTaGGGCTGTAGCGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAWGWSC*GCSGHP
Trigger: AGGGTGCCCGCTACAGCCGCAGCAGCTCCAGCCCCA...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCTGGGGCTGGAGCTGCTaGGGCTGTAGCGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPWGWSC*GCSGHP
Trigger: AGGGTGCCCGCTACAGCCGCAGCAGCTCCAGCCCCA...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCCCTCGCGGCCCGTGCTaGTGCAGCCGTGGAACCACT +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPPRGPC*CSRGTT
Trigger: AGTGGTTCCACGGCTGCACCAGCACGGGCCGCGAGG...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCCAGCTCCGGCGTCACTaGAGTGCCCAGGCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPQLRRH*SAQALP
Trigger: CGGCAGAGCCTGGGCACTCCAGTGACGCCGGAGCTG...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTGTTCAGCGGCTCCTCTaGGACCCAGGAGTACCGCCG +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAVQRLL*DPGVPP
Trigger: CGGCGGTACTCCTGGGTCTCAGAGGAGCCGCTGAAC...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTAGGCCGTGGTGTTGGTaGCTGGCCAGCCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPARPWCW*LASLCP
Trigger: TGGGCACAGGCTGGCCAGGCACCAACACCACGGCCT...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTTGGACTCCTGCCAGCTaGGCTTCTCGGCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAWTPAS*ASRPAG
Trigger: GCCTGCAGGCCGAGAAGCGCAGCTGGCAGGAGTCCA...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCGAGAGCCATGGTCAGTaGACAGGCGCCGGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPESHGQ*TGAGPH
Trigger: GTGAGGCCCGGCGCCTGTGCACTGACCATGGCTCTC...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCGATCCACCAGTGCTaGTCCTGGGCCCGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAPIHQC*SWAREN
Trigger: GTTCTCCCGGGCCCAGGAGCAGCACTGGTGGATCGG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTGCTTGGTGTCACAGCTaGTGGTGCGCCAGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAAWCHS*WCARPR
Trigger: ACGGGGCCTGGCGCACCACCAGCTGTGACACCAAGC...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTGAGCAGGGCAGGGCATaGCTGGCAGCACACTCAGCC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAEQGRA*LAAHSA
Trigger: GGCTGAGTGTGCTGCCAGCCATGCCCTGCCCTGCTC...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR TCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTAGGGGTGCCAGTGGGTaGAGCTCACAAGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPARGASG*SSQGSR
Trigger: ACGGGAGCCTTGTGAGCTTCACCCACTGGCACCCCT...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCGCCGGAAGGTGCCGTTaGGGTAGGAGAGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPAGRCR*GRRAQC
Trigger: GCACTGAGCTCTCCTACCTCAACGGCACCTTCCGGC...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCAGCGCTCGTCTTTaGCGTAGTCCTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAPSARL*RSPGWW
Trigger: CCACCACCCAGGACTACGGCAAAGACGAGCGCTGGG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCGCCTTCTTGGACTCCTaGCAGCTGCGCTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPAFLDS*QLRFSA
Trigger: GGCCGAGAAGCGCAGCTGGCAGGAGTCCAAGAAGGC...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTTGGCCACTGCGGGTCTaGTCACCACGCTCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAWPLRV*SPRSRV
Trigger: CACCCTTGAGCGTGGTGACCAGACCCGCAGTGGCCA...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCCAGCCCCCTGCAGCTTaGTGTCACAGCTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPQPPAA*CHSWWC
Trigger: GCACCACCAGCTGTGACACCAAGCTGCAGGGGGCTG...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCTCTTGGAAGGGTACTaGGCCACTCCAGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPALLEGY*ATPGLG
Trigger: CCCGAGCCCTGGAGTGGCCCAGTACCCTTCCAAGAG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCCGCAGTCGTTACTCTTaGTGGGGCAGAAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPRSRYS*WGRSPS
Trigger: GCTGGGGCTTCTGCCCCATCAAGAGTAACGACTGCG...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTAGACGACACCCATGGTaGTGTTGGTGCAAGCGCCGG +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPARRHPW*CWCKRR
Trigger: CCGGCGCTTGCACCAACATCACCATGGGTGTCGTCT...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCCCGCCCGGCAGGAGATaGCATCCCAGCCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGPPGRR*HPSPAQ
Trigger: CTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGG...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCCCGGGACGGCCGAGGTaGAGGCACCCGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGPGRPR*RHPRSR
Trigger: CCTGCTCCTCGGGTGCCTGCACCTCGGCCGTCCCGG...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCATAGGTCCTCCTCGCTaGCGTAGATGCGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPIGPPR*RRCATG
Trigger: GCCAGTGGCGCATCTACGGCAGCGAGGAGGACCTAT...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCAGCTGTGTGTCGCACTaGATGGCCACCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPSCVSH*MATHCR
Trigger: CCTGCAGTGGGTGGCCATGCAGTGCGACACACAGCT...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTAGGCCAGGCTGGCATTaGGGCTCTCACACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPARPGWH*GSHTAG
Trigger: TCCTGCTGTGTGAGAGCCGCAATGCCAGCCTGGCCT...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCGAGACACAACAGATCTaGCCGAGGGGACAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPETQQI*PRGQGR
Trigger: CCTCCCCTGTCCCCTCGGGCAGATCTGTTGTGTCTC...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTGCACACTCAGCCTCATaGCCTGAGAGGAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAAHSAS*PERSLG
Trigger: GCCCAGACTCCTCTCAGGGCATGAGGCTGAGTGTGC...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR CCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCGCTTGGATATGTTGCTaGTGCGGGCCCCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPAWICC*CGPPGA
Trigger: TGCTCCTGGGGGCCCGCACCAGCAACATATCCAAGC...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTAGCTCCGCCATGCTGTaGATGCTGACCAGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPASSAML*MLTRSP
Trigger: TGGCGACCTGGTCAGCATCCACAGCATGGCGGAGCT...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCAGCCAGTAGCAGGATaGGCTGTGCCACGTCCAACC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAQPVAG*AVPRPT
Trigger: GGTTGGACGTGGCACAGCCCATCCTGCTACTGGCTG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCGCTGGGCGTGGGATCTaGCCCCGGCAGCTCCGGCGT +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLAGRGI*PRQLRR
Trigger: ACGCCGGAGCTGCCGGGGCCAGATCCCACGCCCAGC...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTTCCTGCTCCACCCACTaGAAGTCCCTCTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPASCSTH*KSLCEA
Trigger: TGCCTCGCAGAGGGACTTCCAGTGGGTGGAGCAGGA...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTGGGTCCGTGCCCTTCTaGCAGATGAAGCCATGGGTC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAGSVPF*QMKPWV
Trigger: GACCCATGGCTTCATCTGCCAGAAGGGCACGGACCC...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCAGCCCCGTGCCCTTCTaGCAGATGAAGCCATGGGTC +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPSPVPF*QMKPWV
Trigger: GACCCATGGCTTCATCTGCCAGAAGGGCACGGGGCT...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR TCA 90 bp CCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGATCCCGACGGTTAGGAGCCGGTGCTGTTaGGGTCCTGCAGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: PYAVAPAPTLTPSGIPTVRSRCC*GPAGPS
Trigger: GGACGGCCCTGCAGGACCTCAACAGCACCGGCTCCT...AACCGTCGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR TCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCCGCCCGGCAGGAGATaGCATCCCAGCCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAPPGRR*HPSPAQ
Trigger: CTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGG...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTTTAGTGGCTGTAGGCTaGGGGGTGGAGCTACTGAGC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPALVAVG*GVELLS
Trigger: GCTCAGTAGCTCCACCCCTCAGCCTACAGCCACTAA...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR GCA 90 bp GAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGATCCCGACGCCGGCGTCACTGGAGTaGCCAGGCTCTGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: EPYAVAPAPTLTPSGIPTPASLE*PGSAGR
Trigger: TCTGCCGGCAGAGCCTGGGCACTCCAGTGACGCCGG...CGTCGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCGATCCAGAACCAGTaGTGCTCGTGGATCTCGGGT +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAPIQNQ*CSWISG
Trigger: ACCCGAGATCCACGAGCAGCACTGGTTCTGGATCGG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCATGTCGTCGTCGTCGTaGCGGCTCCGGTCGAAATTG +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPMSSSS*RLRSKL
Trigger: CAATTTCGACCGGAGCCGGCACGACGACGACGACAT...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCCGCACTTCTTGTCCTTaGCGACAGGCCGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPRTSCP*RQAEVC
Trigger: GCAAACCTCGGCCTGTCGGCAAGGACAAGAAGTGCG...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCGCACTTCTTGTCCTTaGCGACAGGCCGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPARTSCP*RQAEVC
Trigger: GCAAACCTCGGCCTGTCGGCAAGGACAAGAAGTGCG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCGGCAGGTCTGGGGGCTaGGTTTCTTTGGTGACGTTG +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPGRSGG*VSLVTL
Trigger: CAACGTCACCAAAGAAACGCAGCCCCCAGACCTGCC...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCACTGGAAGTCCCTCTaGGAGGCATGGAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAHWKSL*EAWRPI
Trigger: GATTGGCCTCCATGCCTCGCAGAGGGACTTCCAGTG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCCACTGGAAGTCCCTCTaGGAGGCATGGAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPHWKSL*EAWRPI
Trigger: GATTGGCCTCCATGCCTCGCAGAGGGACTTCCAGTG...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCTCCCGCCCTGGCCCTaGCCACGCGCCTGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLLPPWP*PRAWLY
Trigger: ATAGAGCCAGGCGCGTGGGCAGGGCCAGGGCGGGAG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCTCCTCGGCGGCCCCCTaGCTCAGCTGGCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGSSAAP*LSWPAF
Trigger: GAAGGCAGGCCAGCTGAGCCAGGGGGCCGCCGAGGA...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCCCCTGCCCACGCGCCTaGCTCTATTCTTGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPPCPRA*LYSCCS
Trigger: TGAGCAACAAGAATAGAGCCAGGCGCGTGGGCAGGG...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCGCGGATCAACAGGCCTaGGCCGGGGGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGADQQA*AGGSGE
Trigger: CTCCCCAGAGCCCCCGGCCCAGGCCTGTTGATCCGC...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCGAAGGGCCCAGGTTCTaGGGTTTAGTGGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPEGPRF*GLVAVG
Trigger: GCCTACAGCCACTAAACCCCAGAACCTGGGCCCTTC...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR TCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCAGGAGCCGGTGCTGTTaGGGTCCTGCAGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGRSRCC*GPAGPS
Trigger: GGACGGCCCTGCAGGACCTCAACAGCACCGGCTCCT...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCCATTCCCGTCGGCCTTaGGGGCTGTCGTCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGHSRRP*GLSSGS
Trigger: GGAGCCCGACGACAGCCCTCAAGGCCGACGGGAATG...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCAGCGCAGCGGCTTCTaGAGCAGCCGGAAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLQRSGF*SSRKVP
Trigger: CGGCACCTTCCGGCTGCTTCAGAAGCCGCTGCGCTG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCCCTGTGCCCAGGCACTaGATGGTACCCAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPPVPRH*MVPRLN
Trigger: ATTCAACCTGGGTACCATGCAGTGCCTGGGCACAGG...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCCCTCGCTGCCGTAGATaGGCCACTGGCCACTGCGGG +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGPRCRR*ATGHCG
Trigger: CCCGCAGTGGCCAGTGGCGCATCTACGGCAGCGAGG...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCCGCGGCCCGTGCTGGTaGAGCCGTGGAACCACTGGT +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGRGPCW*SRGTTG
Trigger: ACCAGTGGTTCCACGGCTGCACCAGCACGGGCCGCG...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCGTTGGGCTTCTTCTTaGACACATAGGGCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPARWASS*THRAAR
Trigger: TCGCGCTGCCCTATGTGTGCAAGAAGAAGCCCAACG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCCCGGCGTCACTGGAGTaGCCAGGCTCTGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGPASLE*PGSAGR
Trigger: TCTGCCGGCAGAGCCTGGGCACTCCAGTGACGCCGG...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCAGCTCCGCCTGGCTGTaGACCGAGGTCAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGSSAWL*TEVSSA
Trigger: GGCCGAGCTGACCTCGGTGCACAGCCAGGCGGAGCT...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCAGAGGGCTCCCCAGGTaGCCAGTTGGCATACATCAA +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPRGLPR*PVGIHQ
Trigger: TTGATGTATGCCAACTGGGCACCTGGGGAGCCCTCT...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTGCTGTGCAGGACCACTaGACAGCTGGTCGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAAVQDH*TAGRFV
Trigger: AACAAACCGACCAGCTGTGCAGTGGTCCTGCACAGC...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCAGCCCTCGGGCAGCCTaGGTGAGGAAGGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGSPRAA*VRKAWV
Trigger: CACCCAGGCCTTCCTCACGCAGGCTGCCCGAGGGCT...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTACAGCTGTGTTGTCCTaGCAGACCAGAGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPATAVLS*QTRVPP
Trigger: AGGAGGCACTCTGGTCTGGCAGGACAACACAGCTGT...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCGCCATAGCCCGCTGTTaGTCTGAATCCAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPAIARC*SESSSS
Trigger: GCTGCTACTGGATTCAGAGCAACAGCGGGCTATGGC...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCTGATGGGGAGAAGCTaGTCTGCTCAGCACGAGGAA +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPALMGRS*SAQHEE
Trigger: TTCCTCGTGCTGAGCAGAGCAGCTTCTCCCCATCAG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGTGGCAGCCCCGAGGCTaGGCTGTGATGACCGCCCGC +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWWQPRG*AVMTAR
Trigger: GCGGGCGGTCATCACAGCCCAGCCTCGGGGCTGCCA...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCTGCCCAGGGAGGCCGTaGTGTTGGTGCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGCPGRP*CWCLAS
Trigger: GCTGGCCAGGCACCAACACCACGGCCTCCCTGGGCA...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTTCAAAGGGGTGCCAGTaGGTGAAGCTCACAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPASKGCQ*VKLTRL
Trigger: GAGCCTTGTGAGCTTCACCCACTGGCACCCCTTTGA...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCTGTCCCGGAAGTTGTTaGGCTCAAAGGGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPCPGSC*AQRGAS
Trigger: ACTGGCACCCCTTTGAGCCCAACAACTTCCGGGACA...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCCGGCTGTACCCGGGCTaGTCCCGGTTCCAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGRLYPG*SRFQWV
Trigger: CACCCACTGGAACCGGGACCAGCCCGGGTACAGCCG...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp AGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGATCCCGACCAGCTCCGGCGTCACTaGAGTGCCCAGGCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: RTLRRRSSANSDPLWDPDQLRRH*SAQALP
Trigger: CGGCAGAGCCTGGGCACTCCAGTGACGCCGGAGCTG...GTCGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR CCA 90 bp TGTGGTAAGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGCTGGGCGTGGGATCTaGCCCCGGCAGCTCCGGCGT +
Preference number: 4 (lower is better)
Translates to: CGKRTLRRRSSANSDPLWAGRGI*PRQLRR
Trigger: ACGCCGGAGCTGCCGGGGCCAGATCCCACGCCCAGC...CCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCTTACCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR CCA 90 bp AGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGATCCCGACTCCGAGGCCCAGCCCTaGGGACAGGAGCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: RTLRRRSSANSDPLWDPDSEAQP*GQEPVR
Trigger: CCTCACTGGCTCCTGTCCCCAGGGCTGGGCCTCGGA...GTCGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTAGGCCGAGGTTTGCCTaGTGCCCAGGAGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPARPRFA*CPGDEV
Trigger: AACTTCATCTCCTGGGCACCAGGCAAACCTCGGCCT...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCGCCCCACCCGCTCTCTaGCAGCGCTGTCGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPAPPAL*QRCRAS
Trigger: GGAGGCGCGACAGCGCTGCCAGAGAGCGGGTGGGGC...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCCATGCTGTGGATGCTaGCCAGGTCGCCACCGCCCC +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAPCCGC*PGRHRP
Trigger: GGGGCGGTGGCGACCTGGTCAGCATCCACAGCATGG...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp AGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGATCCCGACCTCCAGCGCCAACTCTaGCCCCCTCTGGGATCCCGA +
Preference number: 4 (lower is better)
Translates to: RTLRRRSSANSDPLWDPDLQRQL*PPLGSR
Trigger: TCGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAG...GTCGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR TCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTTCCTGGCCCTGGACCTaGAAACACTTGTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPASWPWT*KHLLRN
Trigger: GTTCCTCAACAAGTGTTTTCAGGTCCAGGGCCAGGA...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCGTCCCAGCGGCCAGTaGAGTGGGCTGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWRPSGQ*SGLRGC
Trigger: ACAGCCCCTCAGCCCACTTCACTGGCCGCTGGGACG...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCTGCGCCACTGGCCACTaGGGGTCTGGTCACCACGCT +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGCATGH*GSGHHA
Trigger: AGCGTGGTGACCAGACCCGCAGTGGCCAGTGGCGCA...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCAGCAGATCCGCACCCTaGTGCTCGCAGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLSRSAP*CSQLAQ
Trigger: CTGGGCCAGCTGCGAGCAGCAGGGTGCGGATCTGCT...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTATCCAGAACCAGTGCTaGTCGTGGATCTCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAIQNQC*SWISGS
Trigger: AGAACCCGAGATCCACGAGCAGCACTGGTTCTGGAT...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCGCCCACGTGGAGTGGTaGTCAAAGAACTTGTACTCG +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPAHVEW*SKNLYS
Trigger: CGAGTACAAGTTCTTTGAGCACCACTCCACGTGGGC...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCTGTTGTGGCTCAGCATaGTGGGGCCCAAGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLCCGSA*WGPSPG
Trigger: CCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACA...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCAGGCCCCGCGCTCGATaGTCTGGCGCCTCCGGTAAA +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGRPRAR*SGASGK
Trigger: TTTACCGGAGGCGCCAGAGCATCGAGCGCGGGGCCT...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCCGGTGGGGCTGGAGCTaGTGCGGCTGTAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPRWGWS*CGCSGH
Trigger: GTGCCCGCTACAGCCGCAGCAGCTCCAGCCCCACCG...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCACCAGCCCAGGCTCTaGCCAGCTCCGGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAHQPRL*PAPAPN
Trigger: GTTGGGAGCCGGAGCTGGGCAGAGCCTGGGCTGGTG...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCTGTCCCTGGACACTTaGTGCTCCAGAAAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPALSLDT*CSRKEA
Trigger: GGCTTCTTTTCTGGAGCAGCAAGTGTCCAGGGACAG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR CCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGGGGAGGCCGTGGTGTTaGTGCCTGGCCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWGRPWC*CLASLC
Trigger: GCACAGGCTGGCCAGGCACCAACACCACGGCCTCCC...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTGTGCTGGTGCAGCCGTaGAACCACTGGTTGTCATAT +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAVLVQP*NHWLSY
Trigger: ATATGACAACCAGTGGTTCCACGGCTGCACCAGCAC...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCCCTGCTGCTCGCAGCTaGCCCAGGCCTCCCTCCACG +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPPAARS*PRPPST
Trigger: CGTGGAGGGAGGCCTGGGCCAGCTGCGAGCAGCAGG...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCGGGTGGGCTCGGCCGTaGCGTTGGGCTTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLGWARP*RWASSC
Trigger: GCAAGAAGAAGCCCAACGCCACGGCCGAGCCCACCC...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGACCTGTCTGGAGGGGTaGGCTCGGCCGTGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWTCLEG*ARPWRW
Trigger: CCAACGCCACGGCCGAGCCCACCCCTCCAGACAGGT...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCATTGGCCCACCTGTCTaGAGGGGTGGGCTCGGCCGT +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGIGPPV*RGGLGR
Trigger: ACGGCCGAGCCCACCCCTCCAGACAGGTGGGCCAAT...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GTGGTAAGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGCGGCTGTACCCGGGCTaGTCCCGGTTCCAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VVREPYAVAPAPTLTPSGRLYPG*SRFQWV
Trigger: CACCCACTGGAACCGGGACCAGCCCGGGTACAGCCG...CCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCTTACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR CCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCACTTGTTGAGGAACTaGATCCAGTCAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAHLLRN*IQSEGQ
Trigger: CTGCCCCTCTGACTGGATCCAGTTCCTCAACAAGTG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCCACTTCACCCGGCTCTaGGGTTCCTGGCCCTGGACC +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGHFTRL*GSWPWT
Trigger: GGTCCAGGGCCAGGAACCCCAGAGCCGGGTGAAGTG...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCTGGTGTCACAGCTGGTaGTGCGCCAGGCCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGWCHSW*CARPRP
Trigger: TGGACGGGGCCTGGCGCACCACCAGCTGTGACACCA...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCTGGACAGGCAGCTGGTaGGGGGCCAGACTGACCCAG +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGWTGSW*GARLTQ
Trigger: CTGGGTCAGTCTGGCCCCCCACCAGCTGCCTGTCCA...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCGCCCAGCTCCCACCCTaGGAGGTTGGGGTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLAQLPP*EVGVSL
Trigger: GAGAGACACCCCAACCTCCCAGGGTGGGAGCTGGGC...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCACCGGATGCAGCAATaGAGGCCGCAGGAATGGGGG +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLHRMQQ*RPQEWG
Trigger: CCCCCATTCCTGCGGCCTTCATTGCTGCATCCGGTG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR GCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCCTGCAGTCACGGTTCTaGCAGCCGCCCGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGLQSRF*QPPEDS
Trigger: TGAGTCCTCGGGCGGCTGGCAGAACCGTGACTGCAG...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCAGCTCCTCCACCTCTTaGTTGATCTGCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPSSSTS*LICLVM
Trigger: CATCACCAAGCAGATCAAGCAAGAGGTGGAGGAGCT...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGTGCATGGCCACCCACTaGAGGGAGGCCAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWCMATH*REARSS
Trigger: GCTGGACCTGGCCTCCCTGCAGTGGGTGGCCATGCA...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCGGAACCACGTGCAGATaGGCTGCGCCTGCGCCCACG +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPGTTCR*AAPAPT
Trigger: CGTGGGCGCAGGCGCAGCGCATCTGCACGTGGTTCC...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCCGGCCTGGAACCACGTaGAGATGCGCTGCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPRPGTT*RCAAPA
Trigger: CGCAGGCGCAGCGCATCTGCACGTGGTTCCAGGCCG...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCCAATCCAGAGCGGCGTaGGCAGCCCTCGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPQSRAA*AALGQP
Trigger: AGGCTGCCCGAGGGCTGCGCACGCCGCTCTGGATTG...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGTGTTGTGGCTCAGCATaGTGGGGCCCAAGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWCCGSA*WGPSPG
Trigger: CCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACA...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCCACCAGCCCAGGCTCTaGCCAGCTCCGGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPHQPRL*PAPAPN
Trigger: GTTGGGAGCCGGAGCTGGGCAGAGCCTGGGCTGGTG...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCACTCCAGGGCTCGGGTaGTGCTCCTCCTGGATCCAC +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGTPGLG*CSSWIH
Trigger: GTGGATCCAGGAGGAGCAGCACCCGAGCCCTGGAGT...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCGTGGTGTTGGTGCCTaGCCAGCCTGTGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVARGVGA*PACAQA
Trigger: TGCCTGGGCACAGGCTGGCCAGGCACCAACACCACG...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp ATTGTGGTAAGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTCCATGGCGCTGCCAGTaGCCAGCGCCACGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: IVVREPYAVAPAPTLTPSPWRCQ*PAPRSP
Trigger: GGGGCTGCGTGGCGCTGGCCACTGGCAGCGCCATGG...AGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCTTACCACAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCTCCGAGGCCCAGCCCTaGGGACAGGAGCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPSEAQP*GQEPVR
Trigger: CCTCACTGGCTCCTGTCCCCAGGGCTGGGCCTCGGA...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGCTCCTCCTCGTAGCTaGCCAGGCTCAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAAPPRS*PGSAAG
Trigger: CCCAGCTGCTGAGCCTGGCCAGCTACGAGGAGGAGC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GTGGTAAGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGGCTCCTCCTCGTAGCTaGCCAGGCTCAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VVREPYAVAPAPTLTPSGAPPRS*PGSAAG
Trigger: CCCAGCTGCTGAGCCTGGCCAGCTACGAGGAGGAGC...CCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCTTACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCACTTCACCCGGCTCTaGGGTTCCTGGCCCTGGACC +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAHFTRL*GSWPWT
Trigger: GGTCCAGGGCCAGGAACCCCAGAGCCGGGTGAAGTG...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGTGGTGTCACAGCTGGTaGTGCGCCAGGCCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWWCHSW*CARPRP
Trigger: TGGACGGGGCCTGGCGCACCACCAGCTGTGACACCA...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGCTTGGTGTCACAGCTaGTGGTGCGCCAGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAAWCHS*WCARPR
Trigger: ACGGGGCCTGGCGCACCACCAGCTGTGACACCAAGC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCCAGCCCCCTGCAGCTTaGTGTCACAGCTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGQPPAA*CHSWWC
Trigger: GCACCACCAGCTGTGACACCAAGCTGCAGGGGGCTG...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCACCACACCCGTGCCCTaGTTCTCAGGCCCAACCCAC +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGTTPVP*FSGPTH
Trigger: GTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGT...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGGCCCAGCTCCCACCCTaGGAGGTTGGGGTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWAQLPP*EVGVSL
Trigger: GAGAGACACCCCAACCTCCCAGGGTGGGAGCTGGGC...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCCGGGCCCCAGATGGTaGCACAGTCCTCCAGACTGT +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAPGPRW*HSPPDC
Trigger: ACAGTCTGGAGGACTGTGTCACCATCTGGGGCCCGG...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCTGAAAACACTTGTTaGGGAACTGGATCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAPENTC*GTGSSQ
Trigger: CTGACTGGATCCAGTTCCTCAACAAGTGTTTTCAGG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGCCTCCGGTAAAGGATaGGGGCTGCGGTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAASGKG*GLRSAR
Trigger: CCTTGCTGACCGCAGCCCTCATCCTTTACCGGAGGC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCGGATCCACTAGAGGGTaGACTCTGGGCCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGGSTRG*TLGPPR
Trigger: TCTGGGAGGGCCCAGAGTTCACCCTCTAGTGGATCC...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGTGCCTGGCCAGCCTGTaGCCAGGCACTGCATGGTAC +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWCLASL*PGTAWY
Trigger: GTACCATGCAGTGCCTGGGCACAGGCTGGCCAGGCA...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCAGGGCAGCGCGATGCTaGAGTCACGGTTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVARAARC*SHGSAS
Trigger: GCTGGCAGAACCGTGACTGCAGCATCGCGCTGCCCT...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCATAGGGCAGCGCGATaGTGCAGTCACGGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLHRAAR*CSHGSA
Trigger: GGCAGAACCGTGACTGCAGCATCGCGCTGCCCTATG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp AATTGTGGTAAGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCACAGCCCCATGGCGCTaGCAGTGGCCAGCGCCACGC +
Preference number: 4 (lower is better)
Translates to: NCGKRTLRRRSSANSDPLTAPWR*QWPAPR
Trigger: GCGTGGCGCTGGCCACTGGCAGCGCCATGGGGCTGT...GAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCTTACCACAATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR GCA 90 bp GAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGATCCCGACGCCGATCCAGAACCAGTaGTGCTCGTGGATCTCGGGT +
Preference number: 4 (lower is better)
Translates to: EPYAVAPAPTLTPSGIPTPIQNQ*CSWISG
Trigger: ACCCGAGATCCACGAGCAGCACTGGTTCTGGATCGG...CGTCGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR GCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGTGGGCTGAGGGGCTGTaGAGGACCACTGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWWAEGL*RTTAQL
Trigger: CAGCTGTGCAGTGGTCCTGCACAGCCCCTCAGCCCA...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCATGGGTCTCCTCCGTaGAGCTCCGATCGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAHGSPP*SSDRPS
Trigger: GCTGGGACGATCGGAGCTGCACGGAGGAGACCCATG...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGTGGGCCTCCACCGGATaGAGCAATGAAGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWWASTG*SNEGRR
Trigger: CCTGCGGCCTTCATTGCTGCATCCGGTGGAGGCCCA...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR CCA 90 bp AATTGTGGTAAGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCCCTCCCACAGCCCCATaGCGCTGCCAGTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: NCGKRTLRRRSSANSDPLPPTAP*RCQWPA
Trigger: CGCTGGCCACTGGCAGCGCCATGGGGCTGTGGGAGG...GAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCTTACCACAATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGTGTGTCGCACTGCATaGCCACCCACTGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAVCRTA*PPTAGR
Trigger: CCTCCCTGCAGTGGGTGGCCATGCAGTGCGACACAC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCGCGCCTGCGCCCACGTaGAGTGGTGCTCAAAGAACT +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGAPAPT*SGAQRT
Trigger: AGTTCTTTGAGCACCACTCCACGTGGGCGCAGGCGC...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGAGGTCAGCTCGGCCTaGAACCACGTGCAGATGCGC +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAEVSSA*NHVQMR
Trigger: GCGCATCTGCACGTGGTTCCAGGCCGAGCTGACCTC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCAAGTCTAGCTCCGCCTaGCTGTGCACCGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGKSSSA*LCTEVS
Trigger: GCTGACCTCGGTGCACAGCCAGGCGGAGCTAGACTT...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCTCCTGCTCCACCCACTaGAAGTCCCTCTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLSCSTH*KSLCEA
Trigger: TGCCTCGCAGAGGGACTTCCAGTGGGTGGAGCAGGA...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCGCACGTAGGCCAGGCTaGCATTGCGGCTCTCACACA +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGARRPG*HCGSHT
Trigger: TGTGTGAGAGCCGCAATGCCAGCCTGGCCTACGTGC...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCGGATGTTCTTCTCAGTaGCCTCGGTGGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGGCSSQ*PRWGWS
Trigger: GCTCCAGCCCCACCGAGGCCACTGAGAAGAACATCC...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCGGATGTTCTTCTCAGTaGCCTCGGTGGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLGCSSQ*PRWGWS
Trigger: GCTCCAGCCCCACCGAGGCCACTGAGAAGAACATCC...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCTGGACAGGCAGCTGGTaGGGGGCCAGACTGACCCAG +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPWTGSW*GARLTQ
Trigger: CTGGGTCAGTCTGGCCCCCCACCAGCTGCCTGTCCA...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCTCAGCCCAGCCCTTGTaGGAGGGTGGCACCCCACCA +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPSAQPL*EGGTPP
Trigger: TGGTGGGGTGCCACCCTCCCACAAGGGCTGGGCTGA...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCAAAGAAGGGGGTCCTaGGGCGCGGATCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWQRRGS*GADQQA
Trigger: GGCCTGTTGATCCGCGCCCCAGGACCCCCTTCTTTG...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCACCCTGGGAGGTTaGGGTGTCTCTCCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWPTLGG*GVSPQS
Trigger: AGACTGGGGAGAGACACCCCAACCTCCCAGGGTGGG...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCGGGCCCCCAGGACTCTaGCAACCCTTCCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPGPPGL*QPFPLL
Trigger: GAGCAAGGGGAAGGGTTGCCAGAGTCCTGGGGGCCC...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCCTAGAGGGTGAACTCTaGGCCCTCCCAGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGLEGEL*ALPDSC
Trigger: GCAGGAGTCTGGGAGGGCCCAGAGTTCACCCTCTAG...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCTCTTGGAAGGGTACTaGGCCACTCCAGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVALLEGY*ATPGLG
Trigger: CCCGAGCCCTGGAGTGGCCCAGTACCCTTCCAAGAG...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGAGACGACACCCATGGTaGTGTTGGTGCAAGCGCCGG +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWRRHPW*CWCKRR
Trigger: CCGGCGCTTGCACCAACATCACCATGGGTGTCGTCT...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCGCCTCCGGTAAAGGATaGGGGCTGCGGTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPASGKG*GLRSAR
Trigger: CCTTGCTGACCGCAGCCCTCATCCTTTACCGGAGGC...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGCCTCCAGGCAGCCCTaGAGTCCATGGCTGAAGATG +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAASRQP*SPWLKM
Trigger: CATCTTCAGCCATGGACTGCAGGGCTGCCTGGAGGC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGTGGATATGTTGCTGGTaGGGGCCCCCAGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWWICCW*GPPGAR
Trigger: CCTTGCTCCTGGGGGCCCGCACCAGCAACATATCCA...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCGAGTTGTCCGACCACTaGCAGCCTCCGCTCGTGTCC +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPELSDH*QPPLVS
Trigger: GGACACGAGCGGAGGCTGGCAGTGGTCGGACAACTC...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCGTGCTGTTGAGGTCCTaGAGGGCCGTCCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGVLLRS*RAVQKY
Trigger: GTACTTCTGGACGGCCCTGCAGGACCTCAACAGCAC...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCAATCCACGCGGAGTCTaGCAGTCCCTGGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVANPRGV*QSLGTA
Trigger: AGCTGTCCCCAGGGACTGGCAGACTCCGCGTGGATT...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGCTCCTCGGGCTCTaGAAAGAAGGGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPRLLGL*KEGGPG
Trigger: CCCAGGACCCCCTTCTTTGCAGAGCCCGAGGAGCCT...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCAGACACCACACCCGTaGCCTGGTTCTCAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAQTPHP*PGSQAQ
Trigger: TTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTG...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCACCCACTTCCAGCGCTaGGCAGGGAGGCTGGTATTG +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVATHFQR*AGRLVL
Trigger: CAATACCAGCCTCCCTGCCCAGCGCTGGAAGTGGGT...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCAAGGGTGCCAGGCTTaGATATGTTGCTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLQGCQA*ICCWCG
Trigger: CCCGCACCAGCAACATATCCAAGCCTGGCACCCTTG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCGTGCACGGCTTTCCGTaGGAGTTTCCCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLVHGFP*EFPWMV
Trigger: CACCATCCAGGGAAACTCCCACGGAAAGCCGTGCAC...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCGTAGTCCTGGGTGGTaGCACACCACAGGTGACCAT +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLRSPGW*HTTGDH
Trigger: ATGGTCACCTGTGGTGTGCCACCACCCAGGACTACG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGTGCCGTAGTCCTGGGTaGTGGCACACCACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWCRSPG*WHTTGD
Trigger: GTCACCTGTGGTGTGCCACCACCCAGGACTACGGCA...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCGCTCGGCCGTGGCGTTaGGCTTCTTCTTGCACACAT +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLARPWR*ASSCTH
Trigger: ATGTGTGCAAGAAGAAGCCCAACGCCACGGCCGAGC...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp AGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGATCCCGAGCAATACCGGAGTTTaGTGTCCGAGGCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: REPYAVAPAPTLTPSGIPSNTGV*CPRPSP
Trigger: AGGGCTGGGCCTCGGACACCAAACTCCGGTATTGCT...CGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR CCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCTTGTACTCGGCCTCCTaGAAGCGCAGCCATTCCCGT +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLLYSAS*KRSHSR
Trigger: ACGGGAATGGCTGCGCTTCCAGGAGGCCGAGTACAA...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCCACCAGTGCTGCTCCTaGGCCCGGGAGAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPHQCCS*ARENFC
Trigger: GCAGAAGTTCTCCCGGGCCCAGGAGCAGCACTGGTG...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCCCAGTCCTCTCGGCTaGCTGTCATGTACACGCACT +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLPSPLG*LSCTRT
Trigger: AGTGCGTGTACATGACAGCCAGCCGAGAGGACTGGG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGCCCCACCCGCTCTCTaGCAGCGCTGTCGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLAPPAL*QRCRAS
Trigger: GGAGGCGCGACAGCGCTGCCAGAGAGCGGGTGGGGC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCGCATGGTACCCAGGTTaGATAGCCGGTTTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGAWYPG*IAGFGR
Trigger: TCTCCCGAAACCGGCTATTCAACCTGGGTACCATGC...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCGTCCTGCAGCCGCTCTaGGCTGAACACCTTATAGCA +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGVLQPL*AEHLIA
Trigger: TGCTATAAGGTGTTCAGCTCAGAGCGGCTGCAGGAC...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp AGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGATCCCGACGTCCTGCAGCCGCTCTaGGCTGAACACCTTATAGCA +
Preference number: 4 (lower is better)
Translates to: RTLRRRSSANSDPLWDPDVLQPL*AEHLIA
Trigger: TGCTATAAGGTGTTCAGCTCAGAGCGGCTGCAGGAC...GTCGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR GCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGGGTCACACTCATACATaGCCAGGGAGGCCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWGHTHT*PGRPWC
Trigger: ACACCACGGCCTCCCTGGGCATGTATGAGTGTGACC...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCCAGGCTTGGATATGTTaGTGGTGCGGGCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPQAWIC*WCGPPG
Trigger: TCCTGGGGGCCCGCACCAGCAACATATCCAAGCCTG...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCACCACGCTCAAGGGTaGCAGGCTTGGATATGTTGC +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLHHAQG*QAWICC
Trigger: GCAACATATCCAAGCCTGGCACCCTTGAGCGTGGTG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCGCTGGCCTGCCTTCTTaGAGATGGATGGCAAGGACT +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGAGLPS*RWMART
Trigger: AGTCCTTGCCATCCATCTGCAAGAAGGCAGGCCAGC...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCTGCTGACGAAGGCCTaGTCGAACCTGTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLLLTKA*SNLLVM
Trigger: CATCACCAACAGGTTCGAGCAGGCCTTCGTCAGCAG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp AGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGATCCCGCAGCTCTTCTTGTCCTaGAGCCGCTCTGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: REPYAVAPAPTLTPSGIPQLFLS*SRSELN
Trigger: GTTCAGCTCAGAGCGGCTGCAGGACAAGAAGAGCTG...CGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR GCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCGCCCGGGAGAACTTCTaGAAGTTGTGGCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLARENF*KLWLRK
Trigger: CTTCCTGAGCCACAACTTGCAGAAGTTCTCCCGGGC...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCTCGCTCTCAGAGGTGTaGAGGCCGATCCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPSLSEV*RPIHQC
Trigger: GCACTGGTGGATCGGCCTGCACACCTCTGAGAGCGA...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCACAGCTGTGTTGTCCTaGCAGACCAGAGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLTAVLS*QTRVPP
Trigger: AGGAGGCACTCTGGTCTGGCAGGACAACACAGCTGT...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCACAGGAGTGATGGATaGTCAGCCCCCTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAHRSDG*SAPSAD
Trigger: GTCAGCTGAGGGGGCTGAGCATCCATCACTCCTGTG...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCCAGACACCACACCCGTaGCCTGGTTCTCAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPQTPHP*PGSQAQ
Trigger: TTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTG...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCCAGCCCTGCAGTCCATaGCTGAAGATGAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGQPCSP*LKMRKT
Trigger: CGTCTTCCTCATCTTCAGCCATGGACTGCAGGGCTG...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCCAGCTGTCAGTCAGCTaGTCCTTGTCCCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGQLSVS*SLSQKV
Trigger: GACCTTCTGGGACAAGGACCAGCTGACTGACAGCTG...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCACTCCACCTTCACATTaGCCCACCTGTCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVATPPSH*PTCLEG
Trigger: CCCCTCCAGACAGGTGGGCCAATGTGAAGGTGGAGT...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp GAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGATCCCGACGTGGTCCCGGTTCCAGTaGGTGTACATGACTTCATCC +
Preference number: 4 (lower is better)
Translates to: EPYAVAPAPTLTPSGIPTWSRFQ*VYMTSS
Trigger: GGATGAAGTCATGTACACCCACTGGAACCGGGACCA...CGTCGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR CCA 90 bp TGTGGTAAGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGAACTCTGACCCCCTCTaGGATCCCGACGGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: CGKRTLRRRSSANSDPLWNSDPL*DPDGSG
Trigger: GCCTGAACCGTCGGGATCCCAGAGGGGGTCAGAGTT...CCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCTTACCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCTCCCTCTGCGAGGCATaGAGGCCAATCCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGSLCEA*RPIQRS
Trigger: TGACCTTTGGATTGGCCTCCATGCCTCGCAGAGGGA...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGTGGCAGATGAAGCCATaGGTCTCCTCCGTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWWQMKP*VSSVQL
Trigger: GAGCTGCACGGAGGAGACCCATGGCTTCATCTGCCA...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCTGGCAGATGAAGCCATaGGTCTCCTCCGTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAWQMKP*VSSVQL
Trigger: GAGCTGCACGGAGGAGACCCATGGCTTCATCTGCCA...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCCCTGCCCACGCGCCTaGCTCTATTCTTGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAPCPRA*LYSCCS
Trigger: TGAGCAACAAGAATAGAGCCAGGCGCGTGGGCAGGG...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCGCTGAGGCTGCCAGGTaGGAAGAGAGACACAACAGA +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGAEAAR*EERHNR
Trigger: TCTGTTGTGTCTCTCTTCCCACCTGGCAGCCTCAGC...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCCTAGAGGGTGAACTCTaGGCCCTCCCAGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPLEGEL*ALPDSC
Trigger: GCAGGAGTCTGGGAGGGCCCAGAGTTCACCCTCTAG...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCCGCATACTTTGTCCTaGCTGGGACTGTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLPHTLS*LGLWPL
Trigger: AAGAGGCCACAGTCCCAGCCAGGACAAAGTATGCGG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCAGGGCATGGCTaGCAGCACACTCAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPRAGHG*QHTQPH
Trigger: ATGAGGCTGAGTGTGCTGCCAGCCATGCCCTGCCCT...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR TCA 90 bp AGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGATCCCGACGCAGCCGCTCTGAGCTaGACACCTTATAGCAATACC +
Preference number: 4 (lower is better)
Translates to: RTLRRRSSANSDPLWDPDAAALS*TPYSNT
Trigger: GGTATTGCTATAAGGTGTTCAGCTCAGAGCGGCTGC...GTCGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR TCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGCTGCGTTTCTTTGGTaGCGTTGCTGCGCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAAAFLW*RCCACR
Trigger: TCTGCAAGCGCAGCAACGTCACCAAAGAAACGCAGC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp TGTGGTAAGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGTGCTGTTGAGGTCCTaGAGGGCCGTCCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: CGKRTLRRRSSANSDPLWVLLRS*RAVQKY
Trigger: GTACTTCTGGACGGCCCTGCAGGACCTCAACAGCAC...CCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCTTACCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR GCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCAGCTCTTCTTGTCCTaGAGCCGCTCTGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWQLFLS*SRSELN
Trigger: GTTCAGCTCAGAGCGGCTGCAGGACAAGAAGAGCTG...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp AGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGATCCCGATCCAGAACCAGTGCTaGTCGTGGATCTCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: REPYAVAPAPTLTPSGIPIQNQC*SWISGS
Trigger: AGAACCCGAGATCCACGAGCAGCACTGGTTCTGGAT...CGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR GCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGCAGATGCGCTGCGCCTaGGCCCACGTGGAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLQMRCA*AHVEWC
Trigger: GCACCACTCCACGTGGGCGCAGGCGCAGCGCATCTG...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCACCAGCTGGGCCTCTTaGTGTTCACAGGAGAACTGT +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLTSWAS*CSQENC
Trigger: ACAGTTCTCCTGTGAACAGCAAGAGGCCCAGCTGGT...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGGCTGTGCAGGACCACTaGACAGCTGGTCGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWAVQDH*TAGRFV
Trigger: AACAAACCGACCAGCTGTGCAGTGGTCCTGCACAGC...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGATTCTGAGTCCCAGGTaGTCCTGGTCCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWILSPR*SWSFLP
Trigger: AGGCAGGAAGGACCAGGAGCACCTGGGACTCAGAAT...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGGGAGTTTCCCTGGATaGTGTAGACCTCGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAGSFPG*CRPRGR
Trigger: CCTACCACGAGGTCTACACCATCCAGGGAAACTCCC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCCACAGTTCTCCTCACTaGGGTTGTCCGGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPHSSPH*GCPAGH
Trigger: GTGACCAGCCGGACAACCCCAGTGAGGAGAACTGTG...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCTGGTCCCGGTTCCAGTaGGTGTACATGACTTCATCC +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLWSRFQ*VYMTSS
Trigger: GGATGAAGTCATGTACACCCACTGGAACCGGGACCA...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGCAATACCGGAGTTTaGTGTCCGAGGCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPSNTGV*CPRPSP
Trigger: AGGGCTGGGCCTCGGACACCAAACTCCGGTATTGCT...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCAGGCCGAGGTTTGCCTaGTGCCCAGGAGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVARPRFA*CPGDEV
Trigger: AACTTCATCTCCTGGGCACCAGGCAAACCTCGGCCT...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCTGTAGTTGGCAGGTCTaGGGGCTGCGTTTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGCSWQV*GLRFFG
Trigger: ACCAAAGAAACGCAGCCCCCAGACCTGCCAACTACA...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGTGATGGTGACCAGCTaGGCCTCTTGCTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAVMVTS*ASCCSQ
Trigger: CTGTGAACAGCAAGAGGCCCAGCTGGTCACCATCAC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGGTGATGGTGACCAGCTaGGCCTCTTGCTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWVMVTS*ASCCSQ
Trigger: CTGTGAACAGCAAGAGGCCCAGCTGGTCACCATCAC...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGTCCCTCTGCGAGGCATaGAGGCCAATCCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWSLCEA*RPIQRS
Trigger: TGACCTTTGGATTGGCCTCCATGCCTCGCAGAGGGA...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCCAGGTGCCCAGTTaGCATACATCAAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWPQVPS*HTSKAP
Trigger: AGGAGCCTTTGATGTATGCCAACTGGGCACCTGGGG...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGCTGAGGCTGCCAGGTaGGAAGAGAGACACAACAGA +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAAEAAR*EERHNR
Trigger: TCTGTTGTGTCTCTCTTCCCACCTGGCAGCCTCAGC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCCGCATACTTTGTCCTaGCTGGGACTGTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAPHTLS*LGLWPL
Trigger: AAGAGGCCACAGTCCCAGCCAGGACAAAGTATGCGG...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCCCATCTGCAATGGCATaGAGCAGAGGTAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGPSAMA*SRGNSS
Trigger: GCTGGAGTTACCTCTGCTCCATGCCATTGCAGATGG...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR CCA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGAGTCTAGCCTCGGCTaGCTGTCATGTACACGCACT +
Preference number: 4 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAESSLG*LSCTRT
Trigger: AGTGCGTGTACATGACAGCCAGCCGAGGCTAGACTC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR TCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGCTCCAGCGCCAACTCTaGCCCCCTCTGGGATCCCGA +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLLQRQL*PPLGSR
Trigger: TCGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAG...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAACCATCTGTCCATCTaGAGCGCCCATCGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPNHLSI*SAHRSQ
Trigger: CTGAGAGCGATGGGCGCTTCAGATGGACAGATGGTT...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCGCTGCGTTTCTTTGGTaGCGTTGCTGCGCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPAAFLW*RCCACR
Trigger: TCTGCAAGCGCAGCAACGTCACCAAAGAAACGCAGC...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGTCCTGGCCCTGGACCTaGAAACACTTGTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWSWPWT*KHLLRN
Trigger: GTTCCTCAACAAGTGTTTTCAGGTCCAGGGCCAGGA...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGTTCAGCGGCTCCTCTaGGACCCAGGAGTACCGCCG +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLVQRLL*DPGVPP
Trigger: CGGCGGTACTCCTGGGTCTCAGAGGAGCCGCTGAAC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCCCAGTGTACGACAATaGCAGCGAAGATTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLPSVRQ*QRRFSA
Trigger: AGCACTGAATCTTCGCTGGCATTGTCGTACACTGGG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCCCGAGGTTTGCCTGGTaGCCAGGAGATGAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGPRFAW*PGDEVY
Trigger: ATAAACTTCATCTCCTGGGCACCAGGCAAACCTCGG...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGACCAGCTGGGCCTCTTaGTGTTCACAGGAGAACTGT +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWTSWAS*CSQENC
Trigger: ACAGTTCTCCTGTGAACAGCAAGAGGCCCAGCTGGT...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGGTCCCTGGGGACAGCTaGCATGGTAGCTTATTCTTC +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWVPGDS*HGSLFF
Trigger: GAAGAATAAGCTACCATGGCAGCTGTCCCCAGGGAC...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCGCCATAGCCCGCTGTTaGTCTGAATCCAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPAIARC*SESSSS
Trigger: GCTGCTACTGGATTCAGAGCAACAGCGGGCTATGGC...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCCTGATGGGGAGAAGCTaGTCTGCTCAGCACGAGGAA +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPLMGRS*SAQHEE
Trigger: TTCCTCGTGCTGAGCAGAGCAGCTTCTCCCCATCAG...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCCAGCCGTGGAACCACTaGTTGTCATATTTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGQPWNH*LSYLKG
Trigger: CCCCTTCAAATATGACAACCAGTGGTTCCACGGCTG...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCCTGCCTTCTTGCAGATaGATGGCAAGGACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGLPSCR*MARTGY
Trigger: GTAACCAGTCCTTGCCATCCATCTGCAAGAAGGCAG...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCAACCAGTGCTGCTCGTaGATCTCGGGTTCTGATTCA +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGNQCCS*ISGSDS
Trigger: TGAATCAGAACCCGAGATCCACGAGCAGCACTGGTT...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCGCACGTCCGTACCTCTaGGGATCTTGCAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPARPYL*GSCRSS
Trigger: ACTGGATCTGCAAGATCCCCAGAGGTACGGACGTGC...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGTGTAGTTGGCAGGTCTaGGGGCTGCGTTTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWCSWQV*GLRFFG
Trigger: ACCAAAGAAACGCAGCCCCCAGACCTGCCAACTACA...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCCCCCAGGTGCCCAGTTaGCATACATCAAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPPQVPS*HTSKAP
Trigger: AGGAGCCTTTGATGTATGCCAACTGGGCACCTGGGG...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
60% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGGGCCCCCAGGACTCTaGCAACCCTTCCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLGPPGL*QPFPLL
Trigger: GAGCAAGGGGAAGGGTTGCCAGAGTCCTGGGGGCCC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCATACTTTGTCCTGGCTaGGACTGTGGCCTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGILCPG*DCGLLE
Trigger: TTCCAAGAGGCCACAGTCCCAGCCAGGACAAAGTAT...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCCCTGAAAACACTTGTTaGGGAACTGGATCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGPENTC*GTGSSQ
Trigger: CTGACTGGATCCAGTTCCTCAACAAGTGTTTTCAGG...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGAGGTTTGCCTGGTaGCCAGGAGATGAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWPRFAW*PGDEVY
Trigger: ATAAACTTCATCTCCTGGGCACCAGGCAAACCTCGG...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCGTCCCTGGGGACAGCTaGCATGGTAGCTTATTCTTC +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPVPGDS*HGSLFF
Trigger: GAAGAATAAGCTACCATGGCAGCTGTCCCCAGGGAC...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGAGGCTCCTCGGGCTCTaGAAAGAAGGGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLRLLGL*KEGGPG
Trigger: CCCAGGACCCCCTTCTTTGCAGAGCCCGAGGAGCCT...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGACTCCAGGGCTCGGGTaGTGCTCCTCCTGGATCCAC +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLTPGLG*CSSWIH
Trigger: GTGGATCCAGGAGGAGCAGCACCCGAGCCCTGGAGT...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGAGCAAGGACAGCTaGTCACCCAGTGTACGACAA +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPRSKDS*SPSVRQ
Trigger: TTGTCGTACACTGGGTGACCAGCTGTCCTTGCTCCT...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp AAGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGATCCCAACCAGTGCTGCTCGTaGATCTCGGGTTCTGATTCA +
Preference number: 4 (lower is better)
Translates to: KRTLRRRSSANSDPLWDPNQCCS*ISGSDS
Trigger: TGAATCAGAACCCGAGATCCACGAGCAGCACTGGTT...GGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR CCA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCGAATTCAAGTCTTCTaGACCATGGAGACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLRIQVF*TMETGP
Trigger: TGGACCTGTCTCCATGGTCCAGAAGACTTGAATTCG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR TCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGCTCGTGGATCTCCGTaGTGCTCAGCAGATCCGCAC +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLARGSP*CSADPH
Trigger: GTGCGGATCTGCTGAGCATCACGGAGATCCACGAGC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGGATCCACTAGAGGGTaGACTCTGGGCCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLGSTRG*TLGPPR
Trigger: TCTGGGAGGGCCCAGAGTTCACCCTCTAGTGGATCC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCACCTCTTGCTTGATCTaGTTGGTGATGAATTCCAGC +
Preference number: 4 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGTSCLI*LVMNSS
Trigger: GCTGGAATTCATCACCAAGCAGATCAAGCAAGAGGT...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGCCACACACAGCCCCCTaGAGCTTGGTGTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLPHTAP*SLVSQL
Trigger: CAGCTGTGACACCAAGCTGCAGGGGGCTGTGTGTGG...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGAGACACAACAGATCTaGCCGAGGGGACAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLETQQI*PRGQGR
Trigger: CCTCCCCTGTCCCCTCGGGCAGATCTGTTGTGTCTC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCCTTCTTGCAGATGGATaGCAAGGACTGGTTACAGGG +
Preference number: 4 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPLLADG*QGLVTG
Trigger: CCCTGTAACCAGTCCTTGCCATCCATCTGCAAGAAG...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGAACTCTGACCCCCTCTaGGATCCCGACGGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLNSDPL*DPDGSG
Trigger: GCCTGAACCGTCGGGATCCCAGAGGGGGTCAGAGTT...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGCCGGGGGCCCCCAGTTaGAGTAGTTCACAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLPGAPS*SSSQLC
Trigger: ACACAGCTGTGAACTACTCCAACTGGGGGCCCCCGG...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGTGATGGTGACCAGCTaGGAGCCATGGTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLVMVTS*EPWSVH
Trigger: GTGCACTGACCATGGCTCTCAGCTGGTCACCATCAC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGCGCCCGAGGACTCAGTaGGGATCACTCCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLRPRTQ*GSLHSS
Trigger: AGAACTGTGGAGTGATCCGCACTGAGTCCTCGGGCG...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGGCAGGTCTGGGGGCTaGGTTTCTTTGGTGACGTTG +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLGRSGG*VSLVTL
Trigger: CAACGTCACCAAAGAAACGCAGCCCCCAGACCTGCC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGCTGTCGCACCAGGATaGGCCGCATACTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLAVAPG*AAYFVL
Trigger: CAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
3UTR CAA 72 bp CAGAGAAAGGGCCATGTCTTCGAGTCCATGTTCACATaGTCCCACGCTGTCGCACCAGGATGGGCCGCATAC +
Preference number: 4 (lower is better)
Translates to: QRKGHVFESMFT*SHAVAPGWAAY
Trigger: GTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACTCGAAGACATGGCCCTTTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR GCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTTGGGCTCAAAGGGGTaGCAGTGGGTGAAGCTCACA +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLLGSKG*QWVKLT
Trigger: TGTGAGCTTCACCCACTGGCACCCCTTTGAGCCCAA...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGAGAGGGCTCCCCAGGTaGCCAGTTGGCATACATCAA +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLRGLPR*PVGIHQ
Trigger: TTGATGTATGCCAACTGGGCACCTGGGGAGCCCTCT...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR TCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGCAGTTTCAAATCGTTaGGGCCGATCCACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLAVSNR*GRSTAP
Trigger: AGGAGCTGTGGATCGGCCTCAACGATTTGAAACTGC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGCAGCCGCTCTGAGCTaGACACCTTATAGCAATACC +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLAAALS*TPYSNT
Trigger: GGTATTGCTATAAGGTGTTCAGCTCAGAGCGGCTGC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGACAAGCTCAAATTCTaGGTCCCAGGTGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLDKLKF*VPGAPG
Trigger: ACCAGGAGCACCTGGGACTCAGAATTTGAGCTTGTC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR GCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTACCTCTGGGGATCTTaGAGATCCAGTCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLYLWGS*RSSPAV
Trigger: CACAGCTGGACTGGATCTGCAAGATCCCCAGAGGTA...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR TCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGACTGGTTGTCATATTTaGAGGGGATGGTGCACGGCT +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLTGCHI*RGWCTA
Trigger: AGCCGTGCACCATCCCCTTCAAATATGACAACCAGT...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGCCAGCGAAGATTCAGTaGTTCCCGGTCACACTCATA +
Preference number: 4 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLPAKIQ*FPVTLI
Trigger: TATGAGTGTGACCGGGAAGCACTGAATCTTCGCTGG...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR GCA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCACTCAAAATTCATCTaGAGTTTCAAATCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWHSKFI*SFKSLR
Trigger: CCTCAACGATTTGAAACTGCAGATGAATTTTGAGTG...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS CCA 90 bp GGACCGAGGGCGCACAGGCGCAACGCGCTGTGGCAGCCCCGAGGCTaGGCTGTGATGACCGCCCGCAAGGGGCTCGCGTCCTCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: GPRAHRRNALWQPRG*AVMTARKGLASSSG
Trigger: CCCGGAGGAGGACGCGAGCCCCTTGCGGGCGGTCATCACAGCCCAGCCTCGGGGCTGCCACAGCGCGTTGCGCCTGTGCGCCCTCGGTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS-3UTR CAA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCGCTGTCGCGCCTCCTaGTGGCCCAGCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GAEPSPARQEMTSQPGPARCRAS*WPSSSS
Trigger: GGAGCTGCTGCTGGGCCACAAGGAGGCGCGACAGCG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCATTCCCGTCGGCCTaGAGGGCTGTCGTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAPFPSA*RAVVGL
Trigger: GAGCCCGACGACAGCCCTCAAGGCCGACGGGAATGG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS GCA 90 bp GGCTGGGCGTGGGATCTGGCCCCGGCAGCTCCGGCGTCACTGGAGTaGCCAGGCTCTGCCGGCAGATGTAGCGGGCCCGGAACGAGGTAC +
Preference number: 5 (lower is better)
Translates to: GWAWDLAPAAPASLE*PGSAGRCSGPGTRY
Trigger: GTACCTCGTTCCGGGCCCGCTACATCTGCCGGCAGAGCCTGGGCACTCCAGTGACGCCGGAGCTGCCGGGGCCAGATCCCACGCCCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584682.1
CDS-3UTR CAA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCAGGCTTGGATATGTaGCTGGTGCGGGCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAPGLDM*LVRAPR
Trigger: CCTGGGGGCCCGCACCAGCAACATATCCAAGCCTGG...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTAAGGAGCCGGTGCTGTaGAGGTCCTGCAGGGCCGTC +
Preference number: 5 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAKEPVL*RSCRAV
Trigger: GACGGCCCTGCAGGACCTCAACAGCACCGGCTCCTT...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTGCACAGCTGGTCGGTTaGTTGCCACTGGGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: GAEPSPARQEMTSQPGPAAQLVG*LPLGAG
Trigger: CCCTGCTCCCAGTGGCAACAAACCGACCAGCTGTGC...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTACAGCCCCCTGCAGCTaGGTGTCACAGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GAEPSPARQEMTSQPGPATAPCS*VSQLVV
Trigger: CACCACCAGCTGTGACACCAAGCTGCAGGGGGCTGT...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS GCA 90 bp CCCGGAACGAGGTACAGTTCTTCACCTCCCACAGCCCCATGGCGCTaGCAGTGGCCAGCGCCACGCAGCCCCCACGGCTGTACCCGGGCT +
Preference number: 5 (lower is better)
Translates to: PGTRYSSSPPTAPWR*QWPAPRSPHGCTRA
Trigger: AGCCCGGGTACAGCCGTGGGGGCTGCGTGGCGCTGGCCACTGGCAGCGCCATGGGGCTGTGGGAGGTGAAGAACTGTACCTCGTTCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584682.1
CDS-3UTR CAA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCCTGTCCCGGAAGTTGTaGGGCTCAAAGGGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPLSRKL*GSKGCQ
Trigger: CTGGCACCCCTTTGAGCCCAACAACTTCCGGGACAG...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS TCA 90 bp AACTCCAGCACCGGCCCCCAGCTGGGCCTCCACCGGATGCAGCAATaGAGGCCGCAGGAATGGGGGCAGGGAAGGGCCCAGGTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: NSSTGPQLGLHRMQQ*RPQEWGQGRAQVLG
Trigger: CCCCAGAACCTGGGCCCTTCCCTGCCCCCATTCCTGCGGCCTTCATTGCTGCATCCGGTGGAGGCCCAGCTGGGGGCCGGTGCTGGAGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000446119.2
ENST00000579432.1
CDS GCA 90 bp GGAAGGCCTGGGTGTAGGGGTCGGGCACGTAGGCCAGGCTGGCATTaGGGCTCTCACACAGCAGGAGGGCATCGTGCCAGCGCAGCGGCT +
Preference number: 5 (lower is better)
Translates to: GRPGCRGRARRPGWH*GSHTAGGHRASAAA
Trigger: AGCCGCTGCGCTGGCACGATGCCCTCCTGCTGTGTGAGAGCCGCAATGCCAGCCTGGCCTACGTGCCCGACCCCTACACCCAGGCCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS GCA 90 bp GCAGAGGTAACTCCAGCACCGGCCCCCAGCTGGGCCTCCACCGGATaGAGCAATGAAGGCCGCAGGAATGGGGGCAGGGAAGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: AEVTPAPAPSWASTG*SNEGRRNGGREGPR
Trigger: CCTGGGCCCTTCCCTGCCCCCATTCCTGCGGCCTTCATTGCTGCATCCGGTGGAGGCCCAGCTGGGGGCCGGTGCTGGAGTTACCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000446119.2
ENST00000579432.1
CDS-3UTR CAA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCTCCCCAGGTGCCCAGTaGGCATACATCAAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPSPGAQ*AYIKGS
Trigger: GGAGCCTTTGATGTATGCCAACTGGGCACCTGGGGA...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCTCAGCACGAGGAAGCTaGCAGACGACACCCATGGTG +
Preference number: 5 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPSARGS*QTTPMV
Trigger: CACCATGGGTGTCGTCTGCAAGCTTCCTCGTGCTGA...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS GCA 90 bp GGTCGCCACCGCCCCGTAGACATGCCTTCTTGGACTCCTGCCAGCTaGGCTTCTCGGCCTGCAGGCGGTAGCAGTGGCCCTGGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: GRHRPVDMPSWTPAS*ASRPAGGSSGPGRA
Trigger: AGCCCTTCCAGGGCCACTGCTACCGCCTGCAGGCCGAGAAGCGCAGCTGGCAGGAGTCCAAGAAGGCATGTCTACGGGGCGGTGGCGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 90 bp GCTCCGCCTGGCTGTGCACCGAGGTCAGCTCGGCCTGGAACCACGTaGAGATGCGCTGCGCCTGCGCCCACGTGGAGTGGTGCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: APPGCAPRSARPGTT*RCAAPAPTWSGAQR
Trigger: TCTTTGAGCACCACTCCACGTGGGCGCAGGCGCAGCGCATCTGCACGTGGTTCCAGGCCGAGCTGACCTCGGTGCACAGCCAGGCGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS CCA 90 bp AGGAAGTCTAGCTCCGCCTGGCTGTGCACCGAGGTCAGCTCGGCCTaGAACCACGTGCAGATGCGCTGCGCCTGCGCCCACGTGGAGTGG +
Preference number: 5 (lower is better)
Translates to: RKSSSAWLCTEVSSA*NHVQMRCACAHVEW
Trigger: CCACTCCACGTGGGCGCAGGCGCAGCGCATCTGCACGTGGTTCCAGGCCGAGCTGACCTCGGTGCACAGCCAGGCGGAGCTAGACTTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS-3UTR CAA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCTGCATGGTACCCAGGTaGAATAGCCGGTTTCGGGAG +
Preference number: 5 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPCMVPR*NSRFRE
Trigger: CTCCCGAAACCGGCTATTCAACCTGGGTACCATGCA...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCGTCTCAGCCCAGCCCTaGTGGGAGGGTGGCACCCCA +
Preference number: 5 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGVSAQP*WEGGTP
Trigger: TGGGGTGCCACCCTCCCACAAGGGCTGGGCTGAGAC...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS GCA 90 bp CTGACACCAGGATGTTCTTCTCAGTGGCCTCGGTGGGGCTGGAGCTaGTGCGGCTGTAGCGGGCACCCTCAAAGGCCCCGCGCTCGATGC +
Preference number: 5 (lower is better)
Translates to: LTPGCSSQWPRWGWS*CGCSGHPQRPRARC
Trigger: GCATCGAGCGCGGGGCCTTTGAGGGTGCCCGCTACAGCCGCAGCAGCTCCAGCCCCACCGAGGCCACTGAGAAGAACATCCTGGTGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CCA 90 bp GACGGGCTCAGGGAGGGGTCCGTGCCCTTCTGGCAGATGAAGCCATaGGTCTCCTCCGTGCAGCTCCGATCGTCCCAGCGGCCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: DGLREGSVPFWQMKP*VSSVQLRSSQRPVK
Trigger: CTTCACTGGCCGCTGGGACGATCGGAGCTGCACGGAGGAGACCCATGGCTTCATCTGCCAGAAGGGCACGGACCCCTCCCTGAGCCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS CCA 90 bp GCCGAGAGCCCAGGCAAAGACCCGGTCTCCACCAGACTCGGCGCTTaGCCCAGACCAAGGCTTGGTAGGTGTCAGCCCCGTGCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: AESPGKDPVSTRLGA*PRPRLGRCQPRALL
Trigger: CAGAAGGGCACGGGGCTGACACCTACCAAGCCTTGGTCTGGGCCAAGCGCCGAGTCTGGTGGAGACCGGGTCTTTGCCTGGGCTCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580916.1
CDS-3UTR CAA 90 bp AGAGAACCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGATCCCGAAGGAGCCGGTGCTGTaGAGGTCCTGCAGGGCCGTC +
Preference number: 5 (lower is better)
Translates to: REPYAVAPAPTLTPSGIPKEPVL*RSCRAV
Trigger: GACGGCCCTGCAGGACCTCAACAGCACCGGCTCCTT...CGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGGTTCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR CAA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCACACCCATGGTGATGTaGGTGCAAGCGCCGGGGCGC +
Preference number: 5 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGTPMVM*VQAPGR
Trigger: GCGCCCCGGCGCTTGCACCAACATCACCATGGGTGT...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS TCA 90 bp CTCCTCCGTGCAGCTCCGATCGTCCCAGCGGCCAGTGAAGTGGGCTaGGGGGCTGTGCAGGACCACTGCACAGCTGGTCGGTTTGTTGCC +
Preference number: 5 (lower is better)
Translates to: LLRAAPIVPAASEVG*GAVQDHCTAGRFVA
Trigger: GGCAACAAACCGACCAGCTGTGCAGTGGTCCTGCACAGCCCCTCAGCCCACTTCACTGGCCGCTGGGACGATCGGAGCTGCACGGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS GCA 90 bp AGATGCGCCACTGGCCACTGCGGGTCTGGTCACCACGCTCAAGGGTaGCAGGCTTGGATATGTTGCTGGTGCGGGCCCCCAGGAGCAAGG +
Preference number: 5 (lower is better)
Translates to: RCATGHCGSGHHAQG*QAWICCWCGPPGAR
Trigger: CCTTGCTCCTGGGGGCCCGCACCAGCAACATATCCAAGCCTGGCACCCTTGAGCGTGGTGACCAGACCCGCAGTGGCCAGTGGCGCATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 90 bp CGGCCGTGGCGTTGGGCTTCTTCTTGCACACATAGGGCAGCGCGATaGTGCAGTCACGGTTCTGCCAGCCGCCCGAGGACTCAGTGCGGA +
Preference number: 5 (lower is better)
Translates to: RPWRWASSCTHRAAR*CSHGSASRPRTQCG
Trigger: TCCGCACTGAGTCCTCGGGCGGCTGGCAGAACCGTGACTGCAGCATCGCGCTGCCCTATGTGTGCAAGAAGAAGCCCAACGCCACGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 90 bp ACACCAGGATGTTCTTCTCAGTGGCCTCGGTGGGGCTGGAGCTGCTaGGGCTGTAGCGGGCACCCTCAAAGGCCCCGCGCTCGATGCTCT +
Preference number: 5 (lower is better)
Translates to: TPGCSSQWPRWGWSC*GCSGHPQRPRARCS
Trigger: AGAGCATCGAGCGCGGGGCCTTTGAGGGTGCCCGCTACAGCCGCAGCAGCTCCAGCCCCACCGAGGCCACTGAGAAGAACATCCTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CCA 90 bp CTCGGCGGCCCCCTGGCTCAGCTGGCCTGCCTTCTTGCAGATGGATaGCAAGGACTGGTTACAGGGACTGTCGTTCCAGCGGCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: LGGPLAQLACLLADG*QGLVTGTVVPAAFR
Trigger: CCGGAAGGCCGCTGGAACGACAGTCCCTGTAACCAGTCCTTGCCATCCATCTGCAAGAAGGCAGGCCAGCTGAGCCAGGGGGCCGCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 90 bp CCATGTCTGACACCAGGATGTTCTTCTCAGTGGCCTCGGTGGGGCTaGAGCTGCTGCGGCTGTAGCGGGCACCCTCAAAGGCCCCGCGCT +
Preference number: 5 (lower is better)
Translates to: PCLTPGCSSQWPRWG*SCCGCSGHPQRPRA
Trigger: AGCGCGGGGCCTTTGAGGGTGCCCGCTACAGCCGCAGCAGCTCCAGCCCCACCGAGGCCACTGAGAAGAACATCCTGGTGTCAGACATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CCA 90 bp AGGAGTACCGCCGAGAGCCCCGTGCCCTTCTGGCAGATGAAGCCATaGGTCTCCTCCGTGCAGCTCCGATCGTCCCAGCGGCCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: RSTAESPVPFWQMKP*VSSVQLRSSQRPVK
Trigger: CTTCACTGGCCGCTGGGACGATCGGAGCTGCACGGAGGAGACCCATGGCTTCATCTGCCAGAAGGGCACGGGGCTCTCGGCGGTACTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR CAA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCGGCTCGGCCGTGGCGTaGGGCTTCTTCTTGCACACA +
Preference number: 5 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGGSAVA*GFFLHT
Trigger: TGTGTGCAAGAAGAAGCCCAACGCCACGGCCGAGCC...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp CCCTACGCCGTCGCTCCAGCGCCAACTCTGACCCCCTCTGGGATCCCGACGGTTTGGACCCAGCTCTTCTaGTCCTGCAGCCGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: PYAVAPAPTLTPSGIPTVWTQLF*SCSRSE
Trigger: CTCAGAGCGGCTGCAGGACAAGAAGAGCTGGGTCCA...AACCGTCGGGATCCCAGAGGGGGTCAGAGTTGGCGCTGGAGCGACGGCGTAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR CAA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCGCACAGCTGGTCGGTTaGTTGCCACTGGGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGAQLVG*LPLGAG
Trigger: CCCTGCTCCCAGTGGCAACAAACCGACCAGCTGTGC...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGACACCCATGGTGATGTaGGTGCAAGCGCCGGGGCGC +
Preference number: 5 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWTPMVM*VQAPGR
Trigger: GCGCCCCGGCGCTTGCACCAACATCACCATGGGTGT...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS TCA 90 bp TGGTGCCTGGCCAGCCTGTGCCCAGGCACTGCATGGTACCCAGGTTaGATAGCCGGTTTCGGGAGACCCACTTCCAGCGCTGGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: WCLASLCPGTAWYPG*IAGFGRPTSSAGQG
Trigger: TCCCTGCCCAGCGCTGGAAGTGGGTCTCCCGAAACCGGCTATTCAACCTGGGTACCATGCAGTGCCTGGGCACAGGCTGGCCAGGCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 90 bp TGCGGGTCTGGTCACCACGCTCAAGGGTGCCAGGCTTGGATATGTTaGTGGTGCGGGCCCCCAGGAGCAAGGACAGCTGGTCACCCAGTG +
Preference number: 5 (lower is better)
Translates to: CGSGHHAQGCQAWIC*WCGPPGARTAGHPV
Trigger: CACTGGGTGACCAGCTGTCCTTGCTCCTGGGGGCCCGCACCAGCAACATATCCAAGCCTGGCACCCTTGAGCGTGGTGACCAGACCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 90 bp GCGCGATGCTGCAGTCACGGTTCTGCCAGCCGCCCGAGGACTCAGTaGGGATCACTCCACAGTTCTCCTCACTGGGGTTGTCCGGCTGGT +
Preference number: 5 (lower is better)
Translates to: ARCCSHGSASRPRTQ*GSLHSSPHWGCPAG
Trigger: ACCAGCCGGACAACCCCAGTGAGGAGAACTGTGGAGTGATCCGCACTGAGTCCTCGGGCGGCTGGCAGAACCGTGACTGCAGCATCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 90 bp ACCTGTCTGGAGGGGTGGGCTCGGCCGTGGCGTTGGGCTTCTTCTTaGACACATAGGGCAGCGCGATGCTGCAGTCACGGTTCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: TCLEGWARPWRWASS*THRAARCCSHGSAS
Trigger: GCTGGCAGAACCGTGACTGCAGCATCGCGCTGCCCTATGTGTGCAAGAAGAAGCCCAACGCCACGGCCGAGCCCACCCCTCCAGACAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 90 bp CCTGGCTGTGCACCGAGGTCAGCTCGGCCTGGAACCACGTGCAGATaGGCTGCGCCTGCGCCCACGTGGAGTGGTGCTCAAAGAACTTGT +
Preference number: 5 (lower is better)
Translates to: PGCAPRSARPGTTCR*AAPAPTWSGAQRTC
Trigger: ACAAGTTCTTTGAGCACCACTCCACGTGGGCGCAGGCGCAGCGCATCTGCACGTGGTTCCAGGCCGAGCTGACCTCGGTGCACAGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS CCA 90 bp ACTGGCCACTGCGGGTCTGGTCACCACGCTCAAGGGTGCCAGGCTTaGATATGTTGCTGGTGCGGGCCCCCAGGAGCAAGGACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: TGHCGSGHHAQGCQA*ICCWCGPPGARTAG
Trigger: ACCAGCTGTCCTTGCTCCTGGGGGCCCGCACCAGCAACATATCCAAGCCTGGCACCCTTGAGCGTGGTGACCAGACCCGCAGTGGCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 90 bp CCTCCTCGGCGGCCCCCTGGCTCAGCTGGCCTGCCTTCTTGCAGATaGATGGCAAGGACTGGTTACAGGGACTGTCGTTCCAGCGGCCTT +
Preference number: 5 (lower is better)
Translates to: PPRRPPGSAGLPSCR*MARTGYRDCRSSGL
Trigger: AAGGCCGCTGGAACGACAGTCCCTGTAACCAGTCCTTGCCATCCATCTGCAAGAAGGCAGGCCAGCTGAGCCAGGGGGCCGCCGAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS-3UTR CAA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCTTCTCCTCACTGGGGTaGTCCGGCTGGTCACTCTCC +
Preference number: 5 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGFSSLG*SGWSLS
Trigger: GGAGAGTGACCAGCCGGACAACCCCAGTGAGGAGAA...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp GGGGCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTTCCTCCACCTCTTGCTaGATCTGCTTGGTGATGAAT +
Preference number: 5 (lower is better)
Translates to: GAEPSPARQEMTSQPGPASSTSC*ICLVMN
Trigger: ATTCATCACCAAGCAGATCAAGCAAGAGGTGGAGGA...AGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCTGGACCCAGCTCTTCTaGTCCTGCAGCCGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGWTQLF*SCSRSE
Trigger: CTCAGAGCGGCTGCAGGACAAGAAGAGCTGGGTCCA...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCCCGACAGGCCGAGGTTaGCCTGGTGCCCAGGAGATG +
Preference number: 5 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPPTGRG*PGAQEM
Trigger: CATCTCCTGGGCACCAGGCAAACCTCGGCCTGTCGG...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCGGGGGCTGCGTTTCTTaGGTGACGTTGCTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLGGCVS*VTLLRL
Trigger: CAAGCGCAGCAACGTCACCAAAGAAACGCAGCCCCC...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGACAGCCCCCTGCAGCTaGGTGTCACAGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWTAPCS*VSQLVV
Trigger: CACCACCAGCTGTGACACCAAGCTGCAGGGGGCTGT...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCTGGCAACCCTTCCCCTaGCTCCAAACCAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGWQPFP*LQTRAR
Trigger: CCTGGCTCTGGTTTGGAGCAAGGGGAAGGGTTGCCA...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS GCA 90 bp TGGTGTAGACCTCGTGGTAGGGCAGAGCACATAGGTCCTCCTCGCTaGCGTAGATGCGCCACTGGCCACTGCGGGTCTGGTCACCACGCT +
Preference number: 5 (lower is better)
Translates to: WCRPRGRAEHIGPPR*RRCATGHCGSGHHA
Trigger: AGCGTGGTGACCAGACCCGCAGTGGCCAGTGGCGCATCTACGGCAGCGAGGAGGACCTATGTGCTCTGCCCTACCACGAGGTCTACACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 90 bp CCGTGGCGTTGGGCTTCTTCTTGCACACATAGGGCAGCGCGATGCTaGAGTCACGGTTCTGCCAGCCGCCCGAGGACTCAGTGCGGATCA +
Preference number: 5 (lower is better)
Translates to: PWRWASSCTHRAARC*SHGSASRPRTQCGS
Trigger: TGATCCGCACTGAGTCCTCGGGCGGCTGGCAGAACCGTGACTGCAGCATCGCGCTGCCCTATGTGTGCAAGAAGAAGCCCAACGCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 90 bp CATGGTCCTCCTCGGCGGCCCCCTGGCTCAGCTGGCCTGCCTTCTTaGAGATGGATGGCAAGGACTGGTTACAGGGACTGTCGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: HGPPRRPPGSAGLPS*RWMARTGYRDCRSS
Trigger: GCTGGAACGACAGTCCCTGTAACCAGTCCTTGCCATCCATCTGCAAGAAGGCAGGCCAGCTGAGCCAGGGGGCCGCCGAGGAGGACCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 90 bp CTGAAGCGCCCATCGCTCTCAGAGGTGTGCAGGCCGATCCACCAGTaGTGCTCCTGGGCCCGGGAGAACTTCTGCAAGTTGTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: LKRPSLSEVCRPIHQ*CSWARENFCKLWLR
Trigger: CCTGAGCCACAACTTGCAGAAGTTCTCCCGGGCCCAGGAGCAGCACTGGTGGATCGGCCTGCACACCTCTGAGAGCGATGGGCGCTTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS CCA 90 bp GGGTCTGGTCACCACGCTCAAGGGTGCCAGGCTTGGATATGTTGCTaGTGCGGGCCCCCAGGAGCAAGGACAGCTGGTCACCCAGTGTAC +
Preference number: 5 (lower is better)
Translates to: GSGHHAQGCQAWICC*CGPPGARTAGHPVY
Trigger: GTACACTGGGTGACCAGCTGTCCTTGCTCCTGGGGGCCCGCACCAGCAACATATCCAAGCCTGGCACCCTTGAGCGTGGTGACCAGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 90 bp TCACATTGGCCCACCTGTCTGGAGGGGTGGGCTCGGCCGTGGCGTTaGGCTTCTTCTTGCACACATAGGGCAGCGCGATGCTGCAGTCAC +
Preference number: 5 (lower is better)
Translates to: SHWPTCLEGWARPWR*ASSCTHRAARCCSH
Trigger: GTGACTGCAGCATCGCGCTGCCCTATGTGTGCAAGAAGAAGCCCAACGCCACGGCCGAGCCCACCCCTCCAGACAGGTGGGCCAATGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 90 bp CCCTGGCTCAGCTGGCCTGCCTTCTTGCAGATGGATGGCAAGGACTaGTTACAGGGACTGTCGTTCCAGCGGCCTTCCGGGCCCCAGATG +
Preference number: 5 (lower is better)
Translates to: PWLSWPAFLQMDGKD*LQGLSFQRPSGPQM
Trigger: CATCTGGGGCCCGGAAGGCCGCTGGAACGACAGTCCCTGTAACCAGTCCTTGCCATCCATCTGCAAGAAGGCAGGCCAGCTGAGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS-3UTR CAA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCTCGCAGTCGTTACTCTaGATGGGGCAGAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGSQSLL*MGQKPQ
Trigger: CTGGGGCTTCTGCCCCATCAAGAGTAACGACTGCGA...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCTACTTGAGGGGCGAGTaGTCCGACCACTGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAYLRGE*SDHCQP
Trigger: AGGCTGGCAGTGGTCGGACAACTCGCCCCTCAAGTA...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCTCCCAGTTGAGGTACTaGAGGGGCGAGTTGTCCGAC +
Preference number: 5 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLSQLRY*RGELSD
Trigger: GTCGGACAACTCGCCCCTCAAGTACCTCAACTGGGA...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCTGGTCACTCTCCCAGTaGAGGTACTTGAGGGGCGAG +
Preference number: 5 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLWSLSQ*RYLRGE
Trigger: CTCGCCCCTCAAGTACCTCAACTGGGAGAGTGACCA...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCACTCCACCTTCACATaGGCCCACCTGTCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAHSTFT*AHLSGG
Trigger: CCCTCCAGACAGGTGGGCCAATGTGAAGGTGGAGTG...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCGTAGACATGCCTTCTaGGACTCCTGCCAGCTGCGC +
Preference number: 5 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWRRHAF*DSCQLR
Trigger: GCGCAGCTGGCAGGAGTCCAAGAAGGCATGTCTACG...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCAGACTGTCCCGGAAGTaGTTGGGCTCAAAGGGGTGC +
Preference number: 5 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGRLSRK*LGSKGC
Trigger: GCACCCCTTTGAGCCCAACAACTTCCGGGACAGTCT...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCAGCTGGCCTGCCTTCTaGCAGATGGATGGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLSWPAF*QMDGKD
Trigger: GTCCTTGCCATCCATCTGCAAGAAGGCAGGCCAGCT...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGGGGGGCTGCGTTTCTTaGGTGACGTTGCTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWGGCVS*VTLLRL
Trigger: CAAGCGCAGCAACGTCACCAAAGAAACGCAGCCCCC...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCGACCAGCTGGGCCTCTaGCTGTTCACAGGAGAACTG +
Preference number: 5 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGDQLGL*LFTGEL
Trigger: CAGTTCTCCTGTGAACAGCAAGAGGCCCAGCTGGTC...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCGTGCCTCCTTTGGGGTaGAAGTTCATGCCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGVPPLG*KFMPSQ
Trigger: CTGGCTGGGCATGAACTTCAACCCCAAAGGAGGCAC...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCGTGCCTCCTTTGGGGTaGAAGTTCATGCCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGVPPLG*KFMPSQ
Trigger: CTGGCTGGGCATGAACTTCAACCCCAAAGGAGGCAC...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp GCAGAGCCCTCCCCCGCCCGGCAGGAGATGACATCCCAGCCCGGCCCAGCTCCCCGCCTGGCTCTATTCTaGTTGCTCATTCATTTCCAT +
Preference number: 5 (lower is better)
Translates to: AEPSPARQEMTSQPGPAPRLALF*LLIHFH
Trigger: ATGGAAATGAATGAGCAACAAGAATAGAGCCAGGCG...GGGAGCTGGGCCGGGCTGGGATGTCATCTCCTGCCGGGCGGGGGAGGGCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGTGGCAACCCTTCCCCTaGCTCCAAACCAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWWQPFP*LQTRAR
Trigger: CCTGGCTCTGGTTTGGAGCAAGGGGAAGGGTTGCCA...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS TCA 90 bp AGCTGCTCTGCTCAGCACGAGGAAGCTTGCAGACGACACCCATGGTaGTGTTGGTGCAAGCGCCGGGGCGCCATAGCCCGCTGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: SCSAQHEEACRRHPW*CWCKRRGAIARCCS
Trigger: AGAGCAACAGCGGGCTATGGCGCCCCGGCGCTTGCACCAACATCACCATGGGTGTCGTCTGCAAGCTTCCTCGTGCTGAGCAGAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS GCA 90 bp TCTGGTCACCACGCTCAAGGGTGCCAGGCTTGGATATGTTGCTGGTaGGGGCCCCCAGGAGCAAGGACAGCTGGTCACCCAGTGTACGAC +
Preference number: 5 (lower is better)
Translates to: SGHHAQGCQAWICCW*GPPGARTAGHPVYD
Trigger: GTCGTACACTGGGTGACCAGCTGTCCTTGCTCCTGGGGGCCCGCACCAGCAACATATCCAAGCCTGGCACCCTTGAGCGTGGTGACCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 90 bp GAGCACATAGGTCCTCCTCGCTGCCGTAGATGCGCCACTGGCCACTaGGGGTCTGGTCACCACGCTCAAGGGTGCCAGGCTTGGATATGT +
Preference number: 5 (lower is better)
Translates to: EHIGPPRCRRCATGH*GSGHHAQGCQAWIC
Trigger: ACATATCCAAGCCTGGCACCCTTGAGCGTGGTGACCAGACCCGCAGTGGCCAGTGGCGCATCTACGGCAGCGAGGAGGACCTATGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 90 bp TGGAACCACGTGCAGATGCGCTGCGCCTGCGCCCACGTGGAGTGGTaGTCAAAGAACTTGTACTCGGCCTCCTGGAAGCGCAGCCATTCC +
Preference number: 5 (lower is better)
Translates to: WNHVQMRCACAHVEW*SKNLYSASWKRSHS
Trigger: GGAATGGCTGCGCTTCCAGGAGGCCGAGTACAAGTTCTTTGAGCACCACTCCACGTGGGCGCAGGCGCAGCGCATCTGCACGTGGTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS GCA 90 bp CCAGAGGGCTCCCCAGGTGCCCAGTTGGCATACATCAAAGGCTCCTaGTCCACCCACTGGAAGTCCCTCTGCGAGGCATGGAGGCCAATC +
Preference number: 5 (lower is better)
Translates to: PEGSPGAQLAYIKGS*STHWKSLCEAWRPI
Trigger: GATTGGCCTCCATGCCTCGCAGAGGGACTTCCAGTGGGTGGAGCAGGAGCCTTTGATGTATGCCAACTGGGCACCTGGGGAGCCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CCA 90 bp GATTCAGTGCTTCCCGGTCACACTCATACATGCCCAGGGAGGCCGTaGTGTTGGTGCCTGGCCAGCCTGTGCCCAGGCACTGCATGGTAC +
Preference number: 5 (lower is better)
Translates to: DSVLPGHTHTCPGRP*CWCLASLCPGTAWY
Trigger: GTACCATGCAGTGCCTGGGCACAGGCTGGCCAGGCACCAACACCACGGCCTCCCTGGGCATGTATGAGTGTGACCGGGAAGCACTGAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 90 bp CGCTGTTGCTCTGAATCCAGTAGCAGCTGTTGTGGCTCAGCATGCTaGGGCCCAAGCCCGGGGGCCCCCAGTTGGAGTAGTTCACAGCTG +
Preference number: 5 (lower is better)
Translates to: RCCSESSSSCCGSAC*GPSPGAPSWSSSQL
Trigger: CAGCTGTGAACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACAGCTGCTACTGGATTCAGAGCAACAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CCA 90 bp GGGCAGAGGCTCAGGGCCTGTGTCCAGCTCCGAATTCAAGTCTTCTaGACCATGGAGACAGGTCCACCCCTCGCTGAGTCTAGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: GQRLRACVQLRIQVF*TMETGPPLAESSLG
Trigger: GCCGAGGCTAGACTCAGCGAGGGGTGGACCTGTCTCCATGGTCCAGAAGACTTGAATTCGGAGCTGGACACAGGCCCTGAGCCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR CAA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCGTACCTCTGGGGATCTaGCAGATCCAGTCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGVPLGI*QIQSSC
Trigger: ACAGCTGGACTGGATCTGCAAGATCCCCAGAGGTAC...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGACGCACTTCTTGTCCTaGCCGACAGGCCGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWTHFLS*PTGRGL
Trigger: CAAACCTCGGCCTGTCGGCAAGGACAAGAAGTGCGT...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCACGCACTTCTTGTCCTaGCCGACAGGCCGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVATHFLS*PTGRGL
Trigger: CAAACCTCGGCCTGTCGGCAAGGACAAGAAGTGCGT...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCATGTACACGCACTTCTaGTCCTTGCCGACAGGCCGA +
Preference number: 5 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGMYTHF*SLPTGR
Trigger: TCGGCCTGTCGGCAAGGACAAGAAGTGCGTGTACAT...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGCGCTGTCGCGCCTCCTaGTGGCCCAGCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLRCRAS*WPSSSS
Trigger: GGAGCTGCTGCTGGGCCACAAGGAGGCGCGACAGCG...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS TCA 90 bp CGCGGCCCGTGCTGGTGCAGCCGTGGAACCACTGGTTGTCATATTTaGAGGGGATGGTGCACGGCTTTCCGTGGGAGTTTCCCTGGATGG +
Preference number: 5 (lower is better)
Translates to: RGPCWCSRGTTGCHI*RGWCTAFRGSFPGW
Trigger: CCATCCAGGGAAACTCCCACGGAAAGCCGTGCACCATCCCCTTCAAATATGACAACCAGTGGTTCCACGGCTGCACCAGCACGGGCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS TCA 90 bp GGTGACCAGCTGGGCCTCTTGCTGTTCACAGGAGAACTGTGCCTCTaGCCACTTCACCCGGCTCTGGGGTTCCTGGCCCTGGACCTGAAA +
Preference number: 5 (lower is better)
Translates to: GDQLGLLLFTGELCL*PLHPALGFLALDLK
Trigger: TTTCAGGTCCAGGGCCAGGAACCCCAGAGCCGGGTGAAGTGGTCAGAGGCACAGTTCTCCTGTGAACAGCAAGAGGCCCAGCTGGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS GCA 90 bp AACTTCTGCAAGTTGTGGCTCAGGAAGTCTAGCTCCGCCTGGCTGTaGACCGAGGTCAGCTCGGCCTGGAACCACGTGCAGATGCGCTGC +
Preference number: 5 (lower is better)
Translates to: NFCKLWLRKSSSAWL*TEVSSAWNHVQMRC
Trigger: GCAGCGCATCTGCACGTGGTTCCAGGCCGAGCTGACCTCGGTGCACAGCCAGGCGGAGCTAGACTTCCTGAGCCACAACTTGCAGAAGTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS GCA 90 bp ATGGAACCATCTGTCCATCTGAAGCGCCCATCGCTCTCAGAGGTGTaGAGGCCGATCCACCAGTGCTGCTCCTGGGCCCGGGAGAACTTC +
Preference number: 5 (lower is better)
Translates to: MEPSVHLKRPSLSEV*RPIHQCCSWARENF
Trigger: GAAGTTCTCCCGGGCCCAGGAGCAGCACTGGTGGATCGGCCTGCACACCTCTGAGAGCGATGGGCGCTTCAGATGGACAGATGGTTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS CCA 90 bp CGGGAGAACTTCTGCAAGTTGTGGCTCAGGAAGTCTAGCTCCGCCTaGCTGTGCACCGAGGTCAGCTCGGCCTGGAACCACGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: RENFCKLWLRKSSSA*LCTEVSSAWNHVQM
Trigger: CATCTGCACGTGGTTCCAGGCCGAGCTGACCTCGGTGCACAGCCAGGCGGAGCTAGACTTCCTGAGCCACAACTTGCAGAAGTTCTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS CCA 90 bp TCATTTCCATGTCTGACACCAGGATGTTCTTCTCAGTGGCCTCGGTaGGGCTGGAGCTGCTGCGGCTGTAGCGGGCACCCTCAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: SFPCLTPGCSSQWPR*GWSCCGCSGHPQRP
Trigger: GGGCCTTTGAGGGTGCCCGCTACAGCCGCAGCAGCTCCAGCCCCACCGAGGCCACTGAGAAGAACATCCTGGTGTCAGACATGGAAATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CCA 90 bp GGCTCAGGGCCTGTGTCCAGCTCCGAATTCAAGTCTTCTGGACCATaGAGACAGGTCCACCCCTCGCTGAGTCTAGCCTCGGCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: GSGPVSSSEFKSSGP*RQVHPSLSLASAGC
Trigger: ACAGCCAGCCGAGGCTAGACTCAGCGAGGGGTGGACCTGTCTCCATGGTCCAGAAGACTTGAATTCGGAGCTGGACACAGGCCCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS-3UTR CAA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCACTGGTTGTCATATTaGAAGGGGATGGTGCACGGC +
Preference number: 5 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLHWLSY*KGMVHG
Trigger: GCCGTGCACCATCCCCTTCAAATATGACAACCAGTG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCAGCTCCTCCACCTCTaGCTTGATCTGCTTGGTGAT +
Preference number: 5 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLQLLHL*LDLLGD
Trigger: ATCACCAAGCAGATCAAGCAAGAGGTGGAGGAGCTG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCCTCACTGTAGGTCACTaGGTCTTCTCCCAGCCAGTA +
Preference number: 5 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLLTVGH*VFSQPV
Trigger: TACTGGCTGGGAGAAGACCAAGTGACCTACAGTGAG...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCTGGTGCTCAAAGAACTaGTACTCGGCCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLWCSKN*YSASWK
Trigger: CTTCCAGGAGGCCGAGTACAAGTTCTTTGAGCACCA...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGATGTACACGCACTTCTaGTCCTTGCCGACAGGCCGA +
Preference number: 5 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWMYTHF*SLPTGR
Trigger: TCGGCCTGTCGGCAAGGACAAGAAGTGCGTGTACAT...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCAGGTCAAAGGTCACATaGGGCAGGCTGGCTGTGATG +
Preference number: 5 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVARSKVT*GRLAVM
Trigger: CATCACAGCCAGCCTGCCCAATGTGACCTTTGACCT...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCTCCCCAGGTGCCCAGTaGGCATACATCAAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPSPGAQ*AYIKGS
Trigger: GGAGCCTTTGATGTATGCCAACTGGGCACCTGGGGA...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGACCAGAGTGCCTCCTTaGGGGTTGAAGTTCATGCCC +
Preference number: 5 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWTRVPP*GLKFMP
Trigger: GGGCATGAACTTCAACCCCAAAGGAGGCACTCTGGT...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGTCTCAGCCCAGCCCTaGTGGGAGGGTGGCACCCCA +
Preference number: 5 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLVSAQP*WEGGTP
Trigger: TGGGGTGCCACCCTCCCACAAGGGCTGGGCTGAGAC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGAGTCCATGTTCACATaGTCCCACGCTGTCGCACCA +
Preference number: 5 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAESMFT*SHAVAP
Trigger: TGGTGCGACAGCGTGGGACAATGTGAACATGGACTC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS GCA 90 bp CGGGCCCCCAGGAGCAAGGACAGCTGGTCACCCAGTGTACGACAATaGCAGCGAAGATTCAGTGCTTCCCGGTCACACTCATACATGCCC +
Preference number: 5 (lower is better)
Translates to: RAPRSKDSWSPSVRQ*QRRFSASRSHSYMP
Trigger: GGGCATGTATGAGTGTGACCGGGAAGCACTGAATCTTCGCTGGCATTGTCGTACACTGGGTGACCAGCTGTCCTTGCTCCTGGGGGCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS-3UTR CAA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCCCGTGGAACCACTGGTaGTCATATTTGAAGGGGATG +
Preference number: 5 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGPWNHW*SYLKGM
Trigger: CATCCCCTTCAAATATGACAACCAGTGGTTCCACGG...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp CTCTGCCCAGCTCCGGCTCCCAACAGCGACTCCCAAGGGCACCCTTCCATAGGCATCTTGTTGAGCATGTaGGCCACAAAGTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LCPAPAPNSDSQGHPSIGILLSM*ATKCSS
Trigger: GGAGGAGCACTTTGTGGCCAACATGCTCAACAAGAT...GCCTATGGAAGGGTGCCCTTGGGAGTCGCTGTTGGGAGCCGGAGCTGGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGCCGACAGGCCGAGGTTaGCCTGGTGCCCAGGAGATG +
Preference number: 5 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLPTGRG*PGAQEM
Trigger: CATCTCCTGGGCACCAGGCAAACCTCGGCCTGTCGG...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGTCAAAGGTCACATaGGGCAGGCTGGCTGTGATG +
Preference number: 5 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPRSKVT*GRLAVM
Trigger: CATCACAGCCAGCCTGCCCAATGTGACCTTTGACCT...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCACCAGAGTGCCTCCTTaGGGGTTGAAGTTCATGCCC +
Preference number: 5 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPTRVPP*GLKFMP
Trigger: GGGCATGAACTTCAACCCCAAAGGAGGCACTCTGGT...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCGAGTCCATGTTCACATaGTCCCACGCTGTCGCACCA +
Preference number: 5 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPESMFT*SHAVAP
Trigger: TGGTGCGACAGCGTGGGACAATGTGAACATGGACTC...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS GCA 90 bp TCACTCTCCCAGTTGAGGTACTTGAGGGGCGAGTTGTCCGACCACTaGCAGCCTCCGCTCGTGTCCAAGTCATTCAAGCCGATCCACAGG +
Preference number: 5 (lower is better)
Translates to: SLSQLRYLRGELSDH*QPPLVSKSFKPIHR
Trigger: CCTGTGGATCGGCTTGAATGACTTGGACACGAGCGGAGGCTGGCAGTGGTCGGACAACTCGCCCCTCAAGTACCTCAACTGGGAGAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 90 bp CCCCCTCTGGGATCCCGACGGTTCAGGCCGATCCAGAACCAGTGCTaGTCGTGGATCTCGGGTTCTGATTCACCGAAGATCTTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: PPLGSRRFRPIQNQC*SWISGSDSPKILLS
Trigger: GCTCAACAAGATCTTCGGTGAATCAGAACCCGAGATCCACGAGCAGCACTGGTTCTGGATCGGCCTGAACCGTCGGGATCCCAGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS GCA 90 bp GTGGAAAGAATAGCAGTGCTCCCGGAAGGGAATCCACGCGGAGTCTaGCAGTCCCTGGGGACAGCTGCCATGGTAGCTTATTCTTCGGGG +
Preference number: 5 (lower is better)
Translates to: VERIAVLPEGNPRGV*QSLGTAAMVAYSSG
Trigger: CCCCGAAGAATAAGCTACCATGGCAGCTGTCCCCAGGGACTGGCAGACTCCGCGTGGATTCCCTTCCGGGAGCACTGCTATTCTTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS GCA 90 bp CCCCCTCTGGGATCCCGACGGTTCAGGCCGATCCAGAACCAGTGCTaGTCGTGGATCTCGGGTTCTGATTCAAAAGTGCTCCTCCTCGTA +
Preference number: 5 (lower is better)
Translates to: PPLGSRRFRPIQNQC*SWISGSDSKVLLLV
Trigger: TACGAGGAGGAGCACTTTTGAATCAGAACCCGAGATCCACGAGCAGCACTGGTTCTGGATCGGCCTGAACCGTCGGGATCCCAGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS CCA 90 bp CCTCCTCGCTTCACCAAGGCAAGTCAAATAAGGGGCTCACCGGGCTaGTCCCGGTTCCAGTGGGTGTACATGACTTCATCCCCACTGAGC +
Preference number: 5 (lower is better)
Translates to: PPRFTKASQIRGSPG*SRFQWVYMTSSPLS
Trigger: GCTCAGTGGGGATGAAGTCATGTACACCCACTGGAACCGGGACCAGCCCGGTGAGCCCCTTATTTGACTTGCCTTGGTGAAGCGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584265.1
CDS CCA 90 bp CTGGGATCCCGACGGTTCAGGCCGATCCAGAACCAGTGCTGCTCGTaGATCTCGGGTTCTGATTCAAAAGTGCTCCTCCTCGTAGCTGGC +
Preference number: 5 (lower is better)
Translates to: LGSRRFRPIQNQCCS*ISGSDSKVLLLVAG
Trigger: GCCAGCTACGAGGAGGAGCACTTTTGAATCAGAACCCGAGATCCACGAGCAGCACTGGTTCTGGATCGGCCTGAACCGTCGGGATCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS-3UTR CAA 90 bp CCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCAGGGCCCGGCTCTTGCTTGATCTGCTaGGTGATGAATTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PQLTLIRNKRAPQSPGPGSCLIC*VMNSSS
Trigger: GGAGCTGGAATTCATCACCAAGCAGATCAAGCAAGA...GCCGGGCCCTGGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp TGCTCAGCCCCCTCAGCTGACCCTCATCAGGAACAAGAGGGCTCCCCAATCCCCTGCAGTTTCAAATCGTaGAGGCCGATCCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: CSAPSADPHQEQEGSPIPCSFKS*RPIHSS
Trigger: GGAGCTGTGGATCGGCCTCAACGATTTGAAACTGCA...GGGGATTGGGGAGCCCTCTTGTTCCTGATGAGGGTCAGCTGAGGGGGCTGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp AGCAGACACCACACCCGTGCCCTGGTTCTCAGGCCCAACCCACCTAGGCCCCTCTCACCGAAGATCTTGTaGAGCATGTTGGCCACAAAG +
Preference number: 5 (lower is better)
Translates to: SRHHTRALVLRPNPPRPLSPKIL*SMLATK
Trigger: CTTTGTGGCCAACATGCTCAACAAGATCTTCGGTGA...GAGGGGCCTAGGTGGGTTGGGCCTGAGAACCAGGGCACGGGTGTGGTGTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCGAGAACTTCTGCAAGTaGTGGCTCAGGAAGTCTAGC +
Preference number: 5 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVAENFCK*WLRKSS
Trigger: GCTAGACTTCCTGAGCCACAACTTGCAGAAGTTCTC...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS GCA 90 bp GGACAGCTGGTCACCCAGTGTACGACAATGCCAGCGAAGATTCAGTaGTTCCCGGTCACACTCATACATGCCCAGGGAGGCCGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: GQLVTQCTTMPAKIQ*FPVTLIHAQGGRGV
Trigger: AACACCACGGCCTCCCTGGGCATGTATGAGTGTGACCGGGAAGCACTGAATCTTCGCTGGCATTGTCGTACACTGGGTGACCAGCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 90 bp CCAGGTGCCCAGTTGGCATACATCAAAGGCTCCTGCTCCACCCACTaGAAGTCCCTCTGCGAGGCATGGAGGCCAATCCAAAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: PGAQLAYIKGSCSTH*KSLCEAWRPIQRSK
Trigger: CTTTGACCTTTGGATTGGCCTCCATGCCTCGCAGAGGGACTTCCAGTGGGTGGAGCAGGAGCCTTTGATGTATGCCAACTGGGCACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CCA 90 bp AAGGCAAGTCAAATAAGGGGCTCACCGGGCTGGTCCCGGTTCCAGTaGGTGTACATGACTTCATCCCCACTGAGCCAGAAGAAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: KASQIRGSPGWSRFQ*VYMTSSPLSQKKEP
Trigger: CGGCTCCTTCTTCTGGCTCAGTGGGGATGAAGTCATGTACACCCACTGGAACCGGGACCAGCCCGGTGAGCCCCTTATTTGACTTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584265.1
CDS-3UTR CAA 90 bp CCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGGATTCACCGAAGATCTaGTTGAGCATGTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: PTLSHQDGPHTLSWLGLWDSPKI*LSMLAT
Trigger: TGTGGCCAACATGCTCAACAAGATCTTCGGTGAATC...CCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS GCA 90 bp ACACAGTCCTCCAGACTGTCCCGGAAGTTGTTGGGCTCAAAGGGGTaGCAGTGGGTGAAGCTCACAAGGCTCCCGTCAGACCACTCAAAA +
Preference number: 5 (lower is better)
Translates to: TQSSRLSRKLLGSKG*QWVKLTRLPSDHSK
Trigger: TTTTGAGTGGTCTGACGGGAGCCTTGTGAGCTTCACCCACTGGCACCCCTTTGAGCCCAACAACTTCCGGGACAGTCTGGAGGACTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 90 bp TCTTGCTTGATCTGCTTGGTGATGAATTCCAGCTCCGCCATGCTGTaGATGCTGACCAGGTCGCCACCGCCCCGTAGACATGCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SCLICLVMNSSSAML*MLTRSPPPRRHAFL
Trigger: CAAGAAGGCATGTCTACGGGGCGGTGGCGACCTGGTCAGCATCCACAGCATGGCGGAGCTGGAATTCATCACCAAGCAGATCAAGCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS-3UTR CAA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCAGTCAGCTGGTCCTaGTCCCAGAAGGTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLSVSWS*SQKVSQ
Trigger: CTGCGAGACCTTCTGGGACAAGGACCAGCTGACTGA...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS-3UTR CAA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGGACCAGCTGGGCCTCTaGCTGTTCACAGGAGAACTG +
Preference number: 5 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLDQLGL*LFTGEL
Trigger: CAGTTCTCCTGTGAACAGCAAGAGGCCCAGCTGGTC...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp AGTCCATGTTCACATTGTCCCACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCAGCACGAGGAAGCTaGCAGACGACACCCATGGTG +
Preference number: 5 (lower is better)
Translates to: SPCSHCPTLSHQDGPHTLSARGS*QTTPMV
Trigger: CACCATGGGTGTCGTCTGCAAGCTTCCTCGTGCTGA...CAAAGTATGCGGCCCATCCTGGTGCGACAGCGTGGGACAATGTGAACATGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS-3UTR CAA 90 bp CACGCTGTCGCACCAGGATGGGCCGCATACTTTGTCCTGGCTGGGACTGTGGCCCGCCTGGCTCTATTCTaGTTGCTCATTCATTTCCAT +
Preference number: 5 (lower is better)
Translates to: HAVAPGWAAYFVLAGTVARLALF*LLIHFH
Trigger: ATGGAAATGAATGAGCAACAAGAATAGAGCCAGGCG...GGCCACAGTCCCAGCCAGGACAAAGTATGCGGCCCATCCTGGTGCGACAGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000446119.2
CDS TCA 90 bp CCAGACTGTCCCGGAAGTTGTTGGGCTCAAAGGGGTGCCAGTGGGTaGAGCTCACAAGGCTCCCGTCAGACCACTCAAAATTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: PDCPGSCWAQRGASG*SSQGSRQTTQNSSA
Trigger: TGCAGATGAATTTTGAGTGGTCTGACGGGAGCCTTGTGAGCTTCACCCACTGGCACCCCTTTGAGCCCAACAACTTCCGGGACAGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS TCA 90 bp CCCACGCGCCTGGCTCTATTCTTGTTGCTCATTCATTTCCATGTCTaGCACCAGGATGTTCTTCTCAGTGGCCTCGGTGGGGCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: PTRLALFLLLIHFHV*HQDVLLSGLGGAGA
Trigger: AGCTCCAGCCCCACCGAGGCCACTGAGAAGAACATCCTGGTGTCAGACATGGAAATGAATGAGCAACAAGAATAGAGCCAGGCGCGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS GCA 90 bp AATGCTTGCTCTAAGGGGTTTGTGATGGTGACCAGCTGGGCCTCTTaGTGTTCACAGGAGAACTGTGCCTCTGACCACTTCACCCGGCTC +
Preference number: 5 (lower is better)
Translates to: NACSKGFVMVTSWAS*CSQENCASDHFTRL
Trigger: GAGCCGGGTGAAGTGGTCAGAGGCACAGTTCTCCTGTGAACAGCAAGAGGCCCAGCTGGTCACCATCACAAACCCCTTAGAGCAAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS GCA 90 bp TTGGCATACATCAAAGGCTCCTGCTCCACCCACTGGAAGTCCCTCTaGGAGGCATGGAGGCCAATCCAAAGGTCAAAGGTCACATTGGGC +
Preference number: 5 (lower is better)
Translates to: LAYIKGSCSTHWKSL*EAWRPIQRSKVTLG
Trigger: GCCCAATGTGACCTTTGACCTTTGGATTGGCCTCCATGCCTCGCAGAGGGACTTCCAGTGGGTGGAGCAGGAGCCTTTGATGTATGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CCA 90 bp TCCTCCAGACTGTCCCGGAAGTTGTTGGGCTCAAAGGGGTGCCAGTaGGTGAAGCTCACAAGGCTCCCGTCAGACCACTCAAAATTCATC +
Preference number: 5 (lower is better)
Translates to: SSRLSRKLLGSKGCQ*VKLTRLPSDHSKFI
Trigger: GATGAATTTTGAGTGGTCTGACGGGAGCCTTGTGAGCTTCACCCACTGGCACCCCTTTGAGCCCAACAACTTCCGGGACAGTCTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 90 bp CTGGGATCCCGACGGTTCAGGCCGATCCAGAACCAGTGCTGCTCGTaGATCTCGGGTTCTGATTCACCGAAGATCTTGTTGAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: LGSRRFRPIQNQCCS*ISGSDSPKILLSML
Trigger: CAACATGCTCAACAAGATCTTCGGTGAATCAGAACCCGAGATCCACGAGCAGCACTGGTTCTGGATCGGCCTGAACCGTCGGGATCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS CCA 90 bp GGAGATGAAGTTTATAATGGAACCATCTGTCCATCTGCAATGGCATaGAGCAGAGGTAACTCCAGCACCGGCCCCCAGCTGGGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: GDEVYNGTICPSAMA*SRGNSSTGPQLGLH
Trigger: GTGGAGGCCCAGCTGGGGGCCGGTGCTGGAGTTACCTCTGCTCCATGCCATTGCAGATGGACAGATGGTTCCATTATAAACTTCATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446119.2
ENST00000579432.1
CDS CCA 90 bp GCTGTGATGAATGCTTGCTCTAAGGGGTTTGTGATGGTGACCAGCTaGGCCTCTTGCTGTTCACAGGAGAACTGTGCCTCTGACCACTTC +
Preference number: 5 (lower is better)
Translates to: AVMNACSKGFVMVTS*ASCCSQENCASDHF
Trigger: GAAGTGGTCAGAGGCACAGTTCTCCTGTGAACAGCAAGAGGCCCAGCTGGTCACCATCACAAACCCCTTAGAGCAAGCATTCATCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS GCA 90 bp TGGGTGAAGCTCACAAGGCTCCCGTCAGACCACTCAAAATTCATCTaGAGTTTCAAATCGTTGAGGCCGATCCACAGCTCCTCCACCTCT +
Preference number: 5 (lower is better)
Translates to: WVKLTRLPSDHSKFI*SFKSLRPIHSSSTS
Trigger: AGAGGTGGAGGAGCTGTGGATCGGCCTCAACGATTTGAAACTGCAGATGAATTTTGAGTGGTCTGACGGGAGCCTTGTGAGCTTCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 90 bp GTACACGCACTTCTTGTCCTTGCCGACAGGCCGAGGTTTGCCTGGTaGCCAGGAGATGAAGTTTATAATGGAACCATCTGTCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: VHALLVLADRPRFAW*PGDEVYNGTICPSA
Trigger: TGCAGATGGACAGATGGTTCCATTATAAACTTCATCTCCTGGGCACCAGGCAAACCTCGGCCTGTCGGCAAGGACAAGAAGTGCGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446119.2
ENST00000579432.1
CDS GCA 90 bp GTACACGCACTTCTTGTCCTTGCCGACAGGCCGAGGTTTGCCTGGTaGCCAGGAGATGAAGTTTATAATGGAACCATCTGTCCATCTGAA +
Preference number: 5 (lower is better)
Translates to: VHALLVLADRPRFAW*PGDEVYNGTICPSE
Trigger: TTCAGATGGACAGATGGTTCCATTATAAACTTCATCTCCTGGGCACCAGGCAAACCTCGGCCTGTCGGCAAGGACAAGAAGTGCGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS CCA 90 bp CATGTACACGCACTTCTTGTCCTTGCCGACAGGCCGAGGTTTGCCTaGTGCCCAGGAGATGAAGTTTATAATGGAACCATCTGTCCATCT +
Preference number: 5 (lower is better)
Translates to: HVHALLVLADRPRFA*CPGDEVYNGTICPS
Trigger: AGATGGACAGATGGTTCCATTATAAACTTCATCTCCTGGGCACCAGGCAAACCTCGGCCTGTCGGCAAGGACAAGAAGTGCGTGTACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000579432.1
ENST00000583597.5
CDS GCA 72 bp AGGGCGGCGTCCCCAGGGGCGCCGGGACGGCCGAGGTaGAGGCACCCGAGGAGCAGGACGCAGCGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: RAASPGAPGRPR*RHPRSRTQRSR
Trigger: CCTGCTGCGCTGCGTCCTGCTCCTCGGGTGCCTGCACCTCGGCCGTCCCGGCGCCCCTGGGGACGCCGCCCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp CTCGGCCTCCTGGAAGCGCAGCCATTCCCGTCGGCCTaGAGGAGCAGCGCGGGCGTGGGAGCGGCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: LGLLEAQPFPSA*RSSAGVGAAAR
Trigger: CCTGGCCGCCGCTCCCACGCCCGCGCTGCTCCTGCAGGCCGACGGGAATGGCTGCGCTTCCAGGAGGCCGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583597.5
CDS CCA 72 bp ACGCGGGGACCGAGGGCGCACAGGCGCAACGCGCTGTaGCAGCCCCGAGGCTGGGCTGTGATGACCGCCCGC +
Preference number: 6 (lower is better)
Translates to: TRGPRAHRRNAL*QPRGWAVMTAR
Trigger: GCGGGCGGTCATCACAGCCCAGCCTCGGGGCTGCCACAGCGCGTTGCGCCTGTGCGCCCTCGGTCCCCGCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 72 bp GCGCACAGGCGCAACGCGCTGTGGCAGCCCCGAGGCTaGGCTGTGATGACCGCCCGCAAGGGGCTCGCGTCC +
Preference number: 6 (lower is better)
Translates to: AHRRNALWQPRG*AVMTARKGLAS
Trigger: GGACGCGAGCCCCTTGCGGGCGGTCATCACAGCCCAGCCTCGGGGCTGCCACAGCGCGTTGCGCCTGTGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 72 bp GGGCGTGGGATCTGGCCCCGGCAGCTCCGGCGTCACTaGAGTGCCCAGGCTCTGCCGGCAGATGTAGCGGGC +
Preference number: 6 (lower is better)
Translates to: GRGIWPRQLRRH*SAQALPADVAG
Trigger: GCCCGCTACATCTGCCGGCAGAGCCTGGGCACTCCAGTGACGCCGGAGCTGCCGGGGCCAGATCCCACGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584682.1
CDS GCA 72 bp TGGGATCTGGCCCCGGCAGCTCCGGCGTCACTGGAGTaGCCAGGCTCTGCCGGCAGATGTAGCGGGCCCGGA +
Preference number: 6 (lower is better)
Translates to: WDLAPAAPASLE*PGSAGRCSGPG
Trigger: TCCGGGCCCGCTACATCTGCCGGCAGAGCCTGGGCACTCCAGTGACGCCGGAGCTGCCGGGGCCAGATCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584682.1
CDS CCA 72 bp AGCTCCGCCTGGCTGTGCACCGAGGTCAGCTCGGCCTaGAACCACGTGCAGATGCGCTGCGCCTGCGCCCAC +
Preference number: 6 (lower is better)
Translates to: SSAWLCTEVSSA*NHVQMRCACAH
Trigger: GTGGGCGCAGGCGCAGCGCATCTGCACGTGGTTCCAGGCCGAGCTGACCTCGGTGCACAGCCAGGCGGAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS GCA 72 bp GGCTGTGCACCGAGGTCAGCTCGGCCTGGAACCACGTaGAGATGCGCTGCGCCTGCGCCCACGTGGAGTGGT +
Preference number: 6 (lower is better)
Translates to: GCAPRSARPGTT*RCAAPAPTWSG
Trigger: ACCACTCCACGTGGGCGCAGGCGCAGCGCATCTGCACGTGGTTCCAGGCCGAGCTGACCTCGGTGCACAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS CCA 72 bp AGGGCTGCCAGCTCGGCTCGCACTCCACCTTCACATTaGCCCACCTGTCTGGAGGGGTGGGCTCGGCCGTGG +
Preference number: 6 (lower is better)
Translates to: RAASSARTPPSH*PTCLEGWARPW
Trigger: CCACGGCCGAGCCCACCCCTCCAGACAGGTGGGCCAATGTGAAGGTGGAGTGCGAGCCGAGCTGGCAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp GCACCGAGGTCAGCTCGGCCTGGAACCACGTGCAGATaGGCTGCGCCTGCGCCCACGTGGAGTGGTGCTCAA +
Preference number: 6 (lower is better)
Translates to: APRSARPGTTCR*AAPAPTWSGAQ
Trigger: TTGAGCACCACTCCACGTGGGCGCAGGCGCAGCGCATCTGCACGTGGTTCCAGGCCGAGCTGACCTCGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS GCA 72 bp GGGTGTAGGGGTCGGGCACGTAGGCCAGGCTGGCATTaGGGCTCTCACACAGCAGGAGGGCATCGTGCCAGC +
Preference number: 6 (lower is better)
Translates to: GCRGRARRPGWH*GSHTAGGHRAS
Trigger: GCTGGCACGATGCCCTCCTGCTGTGTGAGAGCCGCAATGCCAGCCTGGCCTACGTGCCCGACCCCTACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS CCA 72 bp AGCCCCAGCGCTCGTCTTTGCCGTAGTCCTGGGTGGTaGCACACCACAGGTGACCATCCTCGCGGCCCGTGC +
Preference number: 6 (lower is better)
Translates to: SPSARLCRSPGW*HTTGDHPRGPC
Trigger: GCACGGGCCGCGAGGATGGTCACCTGTGGTGTGCCACCACCCAGGACTACGGCAAAGACGAGCGCTGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 72 bp GCCGAGAGCCCCGTGCCCTTCTGGCAGATGAAGCCATaGGTCTCCTCCGTGCAGCTCCGATCGTCCCAGCGG +
Preference number: 6 (lower is better)
Translates to: AESPVPFWQMKP*VSSVQLRSSQR
Trigger: CCGCTGGGACGATCGGAGCTGCACGGAGGAGACCCATGGCTTCATCTGCCAGAAGGGCACGGGGCTCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS CAA 72 bp AAGGGCTGCCAGCTCGGCTCGCACTCCACCTTCACATaGGCCCACCTGTCTGGAGGGGTGGGCTCGGCCGTG +
Preference number: 6 (lower is better)
Translates to: KGCQLGSHSTFT*AHLSGGVGSAV
Trigger: CACGGCCGAGCCCACCCCTCCAGACAGGTGGGCCAATGTGAAGGTGGAGTGCGAGCCGAGCTGGCAGCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 72 bp AGAAGCCCCAGCGCTCGTCTTTGCCGTAGTCCTGGGTaGTGGCACACCACAGGTGACCATCCTCGCGGCCCG +
Preference number: 6 (lower is better)
Translates to: RSPSARLCRSPG*WHTTGDHPRGP
Trigger: CGGGCCGCGAGGATGGTCACCTGTGGTGTGCCACCACCCAGGACTACGGCAAAGACGAGCGCTGGGGCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 72 bp CCCACCTGTCTGGAGGGGTGGGCTCGGCCGTGGCGTTaGGCTTCTTCTTGCACACATAGGGCAGCGCGATGC +
Preference number: 6 (lower is better)
Translates to: PTCLEGWARPWR*ASSCTHRAARC
Trigger: GCATCGCGCTGCCCTATGTGTGCAAGAAGAAGCCCAACGCCACGGCCGAGCCCACCCCTCCAGACAGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 72 bp AGGGAGGGGTCCGTGCCCTTCTGGCAGATGAAGCCATaGGTCTCCTCCGTGCAGCTCCGATCGTCCCAGCGG +
Preference number: 6 (lower is better)
Translates to: REGSVPFWQMKP*VSSVQLRSSQR
Trigger: CCGCTGGGACGATCGGAGCTGCACGGAGGAGACCCATGGCTTCATCTGCCAGAAGGGCACGGACCCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS CAA 72 bp CTGACCAGGTCGCCACCGCCCCGTAGACATGCCTTCTaGGACTCCTGCCAGCTGCGCTTCTCGGCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: LTRSPPPRRHAF*DSCQLRFSACR
Trigger: CCTGCAGGCCGAGAAGCGCAGCTGGCAGGAGTCCAAGAAGGCATGTCTACGGGGCGGTGGCGACCTGGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CAA 90 bp CACTGGCCACTGCGGGTCTGGTCACCACGCTCAAGGGTGCCAGGCTaGGATATGTTGCTGGTGCGGGCCCCCAGGAGCAAGGACAGCTGG +
Preference number: 6 (lower is better)
Translates to: HWPLRVWSPRSRVPG*DMLLVRAPRSKDSW
Trigger: CCAGCTGTCCTTGCTCCTGGGGGCCCGCACCAGCAACATATCCAAGCCTGGCACCCTTGAGCGTGGTGACCAGACCCGCAGTGGCCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS TCA 72 bp ACGGGCTCAGGGAGGGGTCCGTGCCCTTCTGGCAGATaGAGCCATGGGTCTCCTCCGTGCAGCTCCGATCGT +
Preference number: 6 (lower is better)
Translates to: TGSGRGPCPSGR*SHGSPPCSSDR
Trigger: ACGATCGGAGCTGCACGGAGGAGACCCATGGCTTCATCTGCCAGAAGGGCACGGACCCCTCCCTGAGCCCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS TCA 72 bp GCTCAGCACGAGGAAGCTTGCAGACGACACCCATGGTaGTGTTGGTGCAAGCGCCGGGGCGCCATAGCCCGC +
Preference number: 6 (lower is better)
Translates to: AQHEEACRRHPW*CWCKRRGAIAR
Trigger: GCGGGCTATGGCGCCCCGGCGCTTGCACCAACATCACCATGGGTGTCGTCTGCAAGCTTCCTCGTGCTGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS TCA 72 bp GGAGTACCGCCGAGAGCCCCGTGCCCTTCTGGCAGATaGAGCCATGGGTCTCCTCCGTGCAGCTCCGATCGT +
Preference number: 6 (lower is better)
Translates to: GVPPRAPCPSGR*SHGSPPCSSDR
Trigger: ACGATCGGAGCTGCACGGAGGAGACCCATGGCTTCATCTGCCAGAAGGGCACGGGGCTCTCGGCGGTACTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS GCA 72 bp ACTGGCCACTGCGGGTCTGGTCACCACGCTCAAGGGTaGCAGGCTTGGATATGTTGCTGGTGCGGGCCCCCA +
Preference number: 6 (lower is better)
Translates to: TGHCGSGHHAQG*QAWICCWCGPP
Trigger: TGGGGGCCCGCACCAGCAACATATCCAAGCCTGGCACCCTTGAGCGTGGTGACCAGACCCGCAGTGGCCAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp CCTCGTGGTAGGGCAGAGCACATAGGTCCTCCTCGCTaGCGTAGATGCGCCACTGGCCACTGCGGGTCTGGT +
Preference number: 6 (lower is better)
Translates to: PRGRAEHIGPPR*RRCATGHCGSG
Trigger: ACCAGACCCGCAGTGGCCAGTGGCGCATCTACGGCAGCGAGGAGGACCTATGTGCTCTGCCCTACCACGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp GAGGGGTGGGCTCGGCCGTGGCGTTGGGCTTCTTCTTaGACACATAGGGCAGCGCGATGCTGCAGTCACGGT +
Preference number: 6 (lower is better)
Translates to: EGWARPWRWASS*THRAARCCSHG
Trigger: ACCGTGACTGCAGCATCGCGCTGCCCTATGTGTGCAAGAAGAAGCCCAACGCCACGGCCGAGCCCACCCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp GAGGTCAGCTCGGCCTGGAACCACGTGCAGATGCGCTaGGCCTGCGCCCACGTGGAGTGGTGCTCAAAGAAC +
Preference number: 6 (lower is better)
Translates to: EVSSAWNHVQMR*ACAHVEWCSKN
Trigger: GTTCTTTGAGCACCACTCCACGTGGGCGCAGGCGCAGCGCATCTGCACGTGGTTCCAGGCCGAGCTGACCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS CCA 72 bp CTCATACATGCCCAGGGAGGCCGTGGTGTTGGTGCCTaGCCAGCCTGTGCCCAGGCACTGCATGGTACCCAG +
Preference number: 6 (lower is better)
Translates to: LIHAQGGRGVGA*PACAQALHGTQ
Trigger: CTGGGTACCATGCAGTGCCTGGGCACAGGCTGGCCAGGCACCAACACCACGGCCTCCCTGGGCATGTATGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 72 bp CTTCCCGGTCACACTCATACATGCCCAGGGAGGCCGTaGTGTTGGTGCCTGGCCAGCCTGTGCCCAGGCACT +
Preference number: 6 (lower is better)
Translates to: LPGHTHTCPGRP*CWCLASLCPGT
Trigger: AGTGCCTGGGCACAGGCTGGCCAGGCACCAACACCACGGCCTCCCTGGGCATGTATGAGTGTGACCGGGAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 72 bp TGCGGGTCTGGTCACCACGCTCAAGGGTGCCAGGCTTaGATATGTTGCTGGTGCGGGCCCCCAGGAGCAAGG +
Preference number: 6 (lower is better)
Translates to: CGSGHHAQGCQA*ICCWCGPPGAR
Trigger: CCTTGCTCCTGGGGGCCCGCACCAGCAACATATCCAAGCCTGGCACCCTTGAGCGTGGTGACCAGACCCGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 72 bp CATTGGCCCACCTGTCTGGAGGGGTGGGCTCGGCCGTaGCGTTGGGCTTCTTCTTGCACACATAGGGCAGCG +
Preference number: 6 (lower is better)
Translates to: HWPTCLEGWARP*RWASSCTHRAA
Trigger: CGCTGCCCTATGTGTGCAAGAAGAAGCCCAACGCCACGGCCGAGCCCACCCCTCCAGACAGGTGGGCCAATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 72 bp CCAGGCAAAGACCCGGTCTCCACCAGACTCGGCGCTTaGCCCAGACCAAGGCTTGGTAGGTGTCAGCCCCGT +
Preference number: 6 (lower is better)
Translates to: PGKDPVSTRLGA*PRPRLGRCQPR
Trigger: ACGGGGCTGACACCTACCAAGCCTTGGTCTGGGCCAAGCGCCGAGTCTGGTGGAGACCGGGTCTTTGCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580916.1
CDS CAA 90 bp TTGGTGCCTGGCCAGCCTGTGCCCAGGCACTGCATGGTACCCAGGTaGAATAGCCGGTTTCGGGAGACCCACTTCCAGCGCTGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: LVPGQPVPRHCMVPR*NSRFRETHFQRWAG
Trigger: CCCTGCCCAGCGCTGGAAGTGGGTCTCCCGAAACCGGCTATTCAACCTGGGTACCATGCAGTGCCTGGGCACAGGCTGGCCAGGCACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CAA 90 bp CTGCGGGTCTGGTCACCACGCTCAAGGGTGCCAGGCTTGGATATGTaGCTGGTGCGGGCCCCCAGGAGCAAGGACAGCTGGTCACCCAGT +
Preference number: 6 (lower is better)
Translates to: LRVWSPRSRVPGLDM*LVRAPRSKDSWSPS
Trigger: ACTGGGTGACCAGCTGTCCTTGCTCCTGGGGGCCCGCACCAGCAACATATCCAAGCCTGGCACCCTTGAGCGTGGTGACCAGACCCGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CAA 90 bp CAGATGCGCTGCGCCTGCGCCCACGTGGAGTGGTGCTCAAAGAACTaGTACTCGGCCTCCTGGAAGCGCAGCCATTCCCGTCGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: QMRCACAHVEWCSKN*YSASWKRSHSRRPA
Trigger: TGCAGGCCGACGGGAATGGCTGCGCTTCCAGGAGGCCGAGTACAAGTTCTTTGAGCACCACTCCACGTGGGCGCAGGCGCAGCGCATCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583597.5
CDS GCA 72 bp GGTCACCACGCTCAAGGGTGCCAGGCTTGGATATGTTaGTGGTGCGGGCCCCCAGGAGCAAGGACAGCTGGT +
Preference number: 6 (lower is better)
Translates to: GHHAQGCQAWIC*WCGPPGARTAG
Trigger: ACCAGCTGTCCTTGCTCCTGGGGGCCCGCACCAGCAACATATCCAAGCCTGGCACCCTTGAGCGTGGTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp GTGCAGATGCGCTGCGCCTGCGCCCACGTGGAGTGGTaGTCAAAGAACTTGTACTCGGCCTCCTGGAAGCGC +
Preference number: 6 (lower is better)
Translates to: VQMRCACAHVEW*SKNLYSASWKR
Trigger: GCGCTTCCAGGAGGCCGAGTACAAGTTCTTTGAGCACCACTCCACGTGGGCGCAGGCGCAGCGCATCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS CCA 72 bp CACCACGCTCAAGGGTGCCAGGCTTGGATATGTTGCTaGTGCGGGCCCCCAGGAGCAAGGACAGCTGGTCAC +
Preference number: 6 (lower is better)
Translates to: HHAQGCQAWICC*CGPPGARTAGH
Trigger: GTGACCAGCTGTCCTTGCTCCTGGGGGCCCGCACCAGCAACATATCCAAGCCTGGCACCCTTGAGCGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 72 bp CCCCCACGGCTGTACCCGGGCTGGTCCCGGTTCCAGTaGGTGTACATGACTTCATCCCCACTGAGCCAGAAG +
Preference number: 6 (lower is better)
Translates to: PPRLYPGWSRFQ*VYMTSSPLSQK
Trigger: CTTCTGGCTCAGTGGGGATGAAGTCATGTACACCCACTGGAACCGGGACCAGCCCGGGTACAGCCGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584682.1
CDS CCA 72 bp CACACACAGCCCCCTGCAGCTTGGTGTCACAGCTGGTaGTGCGCCAGGCCCCGTCCACATCTACGTAGGTAC +
Preference number: 6 (lower is better)
Translates to: HTQPPAAWCHSW*CARPRPHLRRY
Trigger: GTACCTACGTAGATGTGGACGGGGCCTGGCGCACCACCAGCTGTGACACCAAGCTGCAGGGGGCTGTGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CCA 72 bp TGTCTGACACCAGGATGTTCTTCTCAGTGGCCTCGGTaGGGCTGGAGCTGCTGCGGCTGTAGCGGGCACCCT +
Preference number: 6 (lower is better)
Translates to: CLTPGCSSQWPR*GWSCCGCSGHP
Trigger: AGGGTGCCCGCTACAGCCGCAGCAGCTCCAGCCCCACCGAGGCCACTGAGAAGAACATCCTGGTGTCAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CAA 72 bp GGCCAGCCTGTGCCCAGGCACTGCATGGTACCCAGGTaGAATAGCCGGTTTCGGGAGACCCACTTCCAGCGC +
Preference number: 6 (lower is better)
Translates to: GQPVPRHCMVPR*NSRFRETHFQR
Trigger: GCGCTGGAAGTGGGTCTCCCGAAACCGGCTATTCAACCTGGGTACCATGCAGTGCCTGGGCACAGGCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CAA 72 bp TGGTCACCACGCTCAAGGGTGCCAGGCTTGGATATGTaGCTGGTGCGGGCCCCCAGGAGCAAGGACAGCTGG +
Preference number: 6 (lower is better)
Translates to: WSPRSRVPGLDM*LVRAPRSKDSW
Trigger: CCAGCTGTCCTTGCTCCTGGGGGCCCGCACCAGCAACATATCCAAGCCTGGCACCCTTGAGCGTGGTGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CAA 72 bp GGGTTGTCCGGCTGGTCACTCTCCCAGTTGAGGTACTaGAGGGGCGAGTTGTCCGACCACTGCCAGCCTCCG +
Preference number: 6 (lower is better)
Translates to: GLSGWSLSQLRY*RGELSDHCQPP
Trigger: CGGAGGCTGGCAGTGGTCGGACAACTCGCCCCTCAAGTACCTCAACTGGGAGAGTGACCAGCCGGACAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CAA 72 bp GCACGAGGAAGCTTGCAGACGACACCCATGGTGATGTaGGTGCAAGCGCCGGGGCGCCATAGCCCGCTGTTG +
Preference number: 6 (lower is better)
Translates to: ARGSLQTTPMVM*VQAPGRHSPLL
Trigger: CAACAGCGGGCTATGGCGCCCCGGCGCTTGCACCAACATCACCATGGGTGTCGTCTGCAAGCTTCCTCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CAA 72 bp TCTCCACCAGACTCGGCGCTTGGCCCAGACCAAGGCTaGGTAGGTGTCAGCCCCGTGCCCTTCTGGCAGATG +
Preference number: 6 (lower is better)
Translates to: SPPDSALGPDQG*VGVSPVPFWQM
Trigger: CATCTGCCAGAAGGGCACGGGGCTGACACCTACCAAGCCTTGGTCTGGGCCAAGCGCCGAGTCTGGTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580916.1
CDS CAA 90 bp GGGCCCCAGATGGTGACACAGTCCTCCAGACTGTCCCGGAAGTTGTaGGGCTCAAAGGGGTGCCAGTGGGTGAAGCTCACAAGGCTCCCG +
Preference number: 6 (lower is better)
Translates to: GPQMVTQSSRLSRKL*GSKGCQWVKLTRLP
Trigger: CGGGAGCCTTGTGAGCTTCACCCACTGGCACCCCTTTGAGCCCAACAACTTCCGGGACAGTCTGGAGGACTGTGTCACCATCTGGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CAA 90 bp AGAGCCATGGTCAGTGCACAGGCGCCGGGCCTCACTGTAGGTCACTaGGTCTTCTCCCAGCCAGTAGCAGGATGGGCTGTGCCACGTCCA +
Preference number: 6 (lower is better)
Translates to: RAMVSAQAPGLTVGH*VFSQPVAGWAVPRP
Trigger: TGGACGTGGCACAGCCCATCCTGCTACTGGCTGGGAGAAGACCAAGTGACCTACAGTGAGGCCCGGCGCCTGTGCACTGACCATGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS TCA 72 bp GCCAGCCTGTGCCCAGGCACTGCATGGTACCCAGGTTaGATAGCCGGTTTCGGGAGACCCACTTCCAGCGCT +
Preference number: 6 (lower is better)
Translates to: ASLCPGTAWYPG*IAGFGRPTSSA
Trigger: AGCGCTGGAAGTGGGTCTCCCGAAACCGGCTATTCAACCTGGGTACCATGCAGTGCCTGGGCACAGGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS TCA 72 bp GACTGTCGTTCCAGCGGCCTTCCGGGCCCCAGATGGTaGCACAGTCCTCCAGACTGTCCCGGAAGTTGTTGG +
Preference number: 6 (lower is better)
Translates to: DCRSSGLPGPRW*HSPPDCPGSCW
Trigger: CCAACAACTTCCGGGACAGTCTGGAGGACTGTGTCACCATCTGGGGCCCGGAAGGCCGCTGGAACGACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS TCA 72 bp AAGGCCTGCTCGAACCTGTTGGTGATGGTGACCAGCTaGGAGCCATGGTCAGTGCACAGGCGCCGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: KACSNLLVMVTS*EPWSVHRRRAS
Trigger: TGAGGCCCGGCGCCTGTGCACTGACCATGGCTCTCAGCTGGTCACCATCACCAACAGGTTCGAGCAGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp TGGGCTTCTTCTTGCACACATAGGGCAGCGCGATGCTaGAGTCACGGTTCTGCCAGCCGCCCGAGGACTCAG +
Preference number: 6 (lower is better)
Translates to: WASSCTHRAARC*SHGSASRPRTQ
Trigger: CTGAGTCCTCGGGCGGCTGGCAGAACCGTGACTGCAGCATCGCGCTGCCCTATGTGTGCAAGAAGAAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp CGTTGGGCTTCTTCTTGCACACATAGGGCAGCGCGATaGTGCAGTCACGGTTCTGCCAGCCGCCCGAGGACT +
Preference number: 6 (lower is better)
Translates to: RWASSCTHRAAR*CSHGSASRPRT
Trigger: AGTCCTCGGGCGGCTGGCAGAACCGTGACTGCAGCATCGCGCTGCCCTATGTGTGCAAGAAGAAGCCCAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp CTGAGCCAGAAGAAGGAGCCGGTGCTGTTGAGGTCCTaGAGGGCCGTCCAGAAGTACTCGCCCTCCCAGTTG +
Preference number: 6 (lower is better)
Translates to: LSQKKEPVLLRS*RAVQKYSPSQL
Trigger: CAACTGGGAGGGCGAGTACTTCTGGACGGCCCTGCAGGACCTCAACAGCACCGGCTCCTTCTTCTGGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000584265.1
ENST00000584682.1
CDS GCA 72 bp AAGTTGTGGCTCAGGAAGTCTAGCTCCGCCTGGCTGTaGACCGAGGTCAGCTCGGCCTGGAACCACGTGCAG +
Preference number: 6 (lower is better)
Translates to: KLWLRKSSSAWL*TEVSSAWNHVQ
Trigger: CTGCACGTGGTTCCAGGCCGAGCTGACCTCGGTGCACAGCCAGGCGGAGCTAGACTTCCTGAGCCACAACTT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS GCA 72 bp TCGCTCTCAGAGGTGTGCAGGCCGATCCACCAGTGCTaGTCCTGGGCCCGGGAGAACTTCTGCAAGTTGTGG +
Preference number: 6 (lower is better)
Translates to: SLSEVCRPIHQC*SWARENFCKLW
Trigger: CCACAACTTGCAGAAGTTCTCCCGGGCCCAGGAGCAGCACTGGTGGATCGGCCTGCACACCTCTGAGAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS GCA 72 bp CCATCGCTCTCAGAGGTGTGCAGGCCGATCCACCAGTaGTGCTCCTGGGCCCGGGAGAACTTCTGCAAGTTG +
Preference number: 6 (lower is better)
Translates to: PSLSEVCRPIHQ*CSWARENFCKL
Trigger: CAACTTGCAGAAGTTCTCCCGGGCCCAGGAGCAGCACTGGTGGATCGGCCTGCACACCTCTGAGAGCGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS CCA 72 bp TCTGAATCCAGTAGCAGCTGTTGTGGCTCAGCATGCTaGGGCCCAAGCCCGGGGGCCCCCAGTTGGAGTAGT +
Preference number: 6 (lower is better)
Translates to: SESSSSCCGSAC*GPSPGAPSWSS
Trigger: ACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACAGCTGCTACTGGATTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CAA 72 bp GTCAGTGCACAGGCGCCGGGCCTCACTGTAGGTCACTaGGTCTTCTCCCAGCCAGTAGCAGGATGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: VSAQAPGLTVGH*VFSQPVAGWAV
Trigger: CACAGCCCATCCTGCTACTGGCTGGGAGAAGACCAAGTGACCTACAGTGAGGCCCGGCGCCTGTGCACTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CAA 72 bp TCATCCCCACTGAGCCAGAAGAAGGAGCCGGTGCTGTaGAGGTCCTGCAGGGCCGTCCAGAAGTACTCGCCC +
Preference number: 6 (lower is better)
Translates to: SSPLSQKKEPVL*RSCRAVQKYSP
Trigger: GGGCGAGTACTTCTGGACGGCCCTGCAGGACCTCAACAGCACCGGCTCCTTCTTCTGGCTCAGTGGGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000584265.1
ENST00000584682.1
CDS CAA 72 bp TGCGCCTGCGCCCACGTGGAGTGGTGCTCAAAGAACTaGTACTCGGCCTCCTGGAAGCGCAGCCATTCCCGT +
Preference number: 6 (lower is better)
Translates to: CACAHVEWCSKN*YSASWKRSHSR
Trigger: ACGGGAATGGCTGCGCTTCCAGGAGGCCGAGTACAAGTTCTTTGAGCACCACTCCACGTGGGCGCAGGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS CAA 72 bp CCTCGGCTGGCTGTCATGTACACGCACTTCTTGTCCTaGCCGACAGGCCGAGGTTTGCCTGGTGCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: PRLAVMYTHFLS*PTGRGLPGAQE
Trigger: CTCCTGGGCACCAGGCAAACCTCGGCCTGTCGGCAAGGACAAGAAGTGCGTGTACATGACAGCCAGCCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS CAA 90 bp TCCGGGCCCCAGATGGTGACACAGTCCTCCAGACTGTCCCGGAAGTaGTTGGGCTCAAAGGGGTGCCAGTGGGTGAAGCTCACAAGGCTC +
Preference number: 6 (lower is better)
Translates to: SGPQMVTQSSRLSRK*LGSKGCQWVKLTRL
Trigger: GAGCCTTGTGAGCTTCACCCACTGGCACCCCTTTGAGCCCAACAACTTCCGGGACAGTCTGGAGGACTGTGTCACCATCTGGGGCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp TGCAGTCACGGTTCTGCCAGCCGCCCGAGGACTCAGTaGGGATCACTCCACAGTTCTCCTCACTGGGGTTGT +
Preference number: 6 (lower is better)
Translates to: CSHGSASRPRTQ*GSLHSSPHWGC
Trigger: ACAACCCCAGTGAGGAGAACTGTGGAGTGATCCGCACTGAGTCCTCGGGCGGCTGGCAGAACCGTGACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp CTCGGCTGGCTGTCATGTACACGCACTTCTTGTCCTTaGCGACAGGCCGAGGTTTGCCTGGTGCCCAGGAGA +
Preference number: 6 (lower is better)
Translates to: LGWLSCTRTSCP*RQAEVCLVPRR
Trigger: TCTCCTGGGCACCAGGCAAACCTCGGCCTGTCGGCAAGGACAAGAAGTGCGTGTACATGACAGCCAGCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000579432.1
ENST00000583597.5
CDS GCA 72 bp TCCCCAGGTGCCCAGTTGGCATACATCAAAGGCTCCTaGTCCACCCACTGGAAGTCCCTCTGCGAGGCATGG +
Preference number: 6 (lower is better)
Translates to: SPGAQLAYIKGS*STHWKSLCEAW
Trigger: CCATGCCTCGCAGAGGGACTTCCAGTGGGTGGAGCAGGAGCCTTTGATGTATGCCAACTGGGCACCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS GCA 72 bp TGTTGGTGCAAGCGCCGGGGCGCCATAGCCCGCTGTTaGTCTGAATCCAGTAGCAGCTGTTGTGGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: CWCKRRGAIARC*SESSSSCCGSA
Trigger: TGCTGAGCCACAACAGCTGCTACTGGATTCAGAGCAACAGCGGGCTATGGCGCCCCGGCGCTTGCACCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CCA 72 bp AGCTGGCCTGCCTTCTTGCAGATGGATGGCAAGGACTaGTTACAGGGACTGTCGTTCCAGCGGCCTTCCGGG +
Preference number: 6 (lower is better)
Translates to: SWPAFLQMDGKD*LQGLSFQRPSG
Trigger: CCCGGAAGGCCGCTGGAACGACAGTCCCTGTAACCAGTCCTTGCCATCCATCTGCAAGAAGGCAGGCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 72 bp TTCTGCAAGTTGTGGCTCAGGAAGTCTAGCTCCGCCTaGCTGTGCACCGAGGTCAGCTCGGCCTGGAACCAC +
Preference number: 6 (lower is better)
Translates to: FCKLWLRKSSSA*LCTEVSSAWNH
Trigger: GTGGTTCCAGGCCGAGCTGACCTCGGTGCACAGCCAGGCGGAGCTAGACTTCCTGAGCCACAACTTGCAGAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000583597.5
CDS CCA 72 bp GTGGAGTGGTGCTCAAAGAACTTGTACTCGGCCTCCTaGAAGCGCAGCCATTCCCGTCGGCCTGCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: VEWCSKNLYSAS*KRSHSRRPAGA
Trigger: TGCTCCTGCAGGCCGACGGGAATGGCTGCGCTTCCAGGAGGCCGAGTACAAGTTCTTTGAGCACCACTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583597.5
CDS CAA 72 bp TCGCGGCCCGTGCTGGTGCAGCCGTGGAACCACTGGTaGTCATATTTGAAGGGGATGGTGCACGGCTTTCCG +
Preference number: 6 (lower is better)
Translates to: SRPVLVQPWNHW*SYLKGMVHGFP
Trigger: CGGAAAGCCGTGCACCATCCCCTTCAAATATGACAACCAGTGGTTCCACGGCTGCACCAGCACGGGCCGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CAA 72 bp TGGTCACTCTCCCAGTTGAGGTACTTGAGGGGCGAGTaGTCCGACCACTGCCAGCCTCCGCTCGTGTCCAAG +
Preference number: 6 (lower is better)
Translates to: WSLSQLRYLRGE*SDHCQPPLVSK
Trigger: CTTGGACACGAGCGGAGGCTGGCAGTGGTCGGACAACTCGCCCCTCAAGTACCTCAACTGGGAGAGTGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CAA 72 bp TCTCGGCTGGCTGTCATGTACACGCACTTCTTGTCCTaGCCGACAGGCCGAGGTTTGCCTGGTGCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: SRLAVMYTHFLS*PTGRGLPGAQE
Trigger: CTCCTGGGCACCAGGCAAACCTCGGCCTGTCGGCAAGGACAAGAAGTGCGTGTACATGACAGCCAGCCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000579432.1
ENST00000583597.5
CDS CAA 72 bp CAGTCCTCTCGGCTGGCTGTCATGTACACGCACTTCTaGTCCTTGCCGACAGGCCGAGGTTTGCCTGGTGCC +
Preference number: 6 (lower is better)
Translates to: QSSRLAVMYTHF*SLPTGRGLPGA
Trigger: GGCACCAGGCAAACCTCGGCCTGTCGGCAAGGACAAGAAGTGCGTGTACATGACAGCCAGCCGAGAGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000579432.1
ENST00000583597.5
CDS CAA 90 bp TCGCGGCCCGTGCTGGTGCAGCCGTGGAACCACTGGTTGTCATATTaGAAGGGGATGGTGCACGGCTTTCCGTGGGAGTTTCCCTGGATG +
Preference number: 6 (lower is better)
Translates to: SRPVLVQPWNHWLSY*KGMVHGFPWEFPWM
Trigger: CATCCAGGGAAACTCCCACGGAAAGCCGTGCACCATCCCCTTCAAATATGACAACCAGTGGTTCCACGGCTGCACCAGCACGGGCCGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp CAGTTGAGGTACTTGAGGGGCGAGTTGTCCGACCACTaGCAGCCTCCGCTCGTGTCCAAGTCATTCAAGCCG +
Preference number: 6 (lower is better)
Translates to: QLRYLRGELSDH*QPPLVSKSFKP
Trigger: CGGCTTGAATGACTTGGACACGAGCGGAGGCTGGCAGTGGTCGGACAACTCGCCCCTCAAGTACCTCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp TCCAGACTGTCCCGGAAGTTGTTGGGCTCAAAGGGGTaGCAGTGGGTGAAGCTCACAAGGCTCCCGTCAGAC +
Preference number: 6 (lower is better)
Translates to: SRLSRKLLGSKG*QWVKLTRLPSD
Trigger: GTCTGACGGGAGCCTTGTGAGCTTCACCCACTGGCACCCCTTTGAGCCCAACAACTTCCGGGACAGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp CTGGGATCCCGACGGTTCAGGCCGATCCAGAACCAGTaGTGCTCGTGGATCTCGGGTTCTGATTCACCGAAG +
Preference number: 6 (lower is better)
Translates to: LGSRRFRPIQNQ*CSWISGSDSPK
Trigger: CTTCGGTGAATCAGAACCCGAGATCCACGAGCAGCACTGGTTCTGGATCGGCCTGAACCGTCGGGATCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS GCA 72 bp ATAGCAGTGCTCCCGGAAGGGAATCCACGCGGAGTCTaGCAGTCCCTGGGGACAGCTGCCATGGTAGCTTAT +
Preference number: 6 (lower is better)
Translates to: IAVLPEGNPRGV*QSLGTAAMVAY
Trigger: ATAAGCTACCATGGCAGCTGTCCCCAGGGACTGGCAGACTCCGCGTGGATTCCCTTCCGGGAGCACTGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CCA 72 bp TCCTCGCGGCCCGTGCTGGTGCAGCCGTGGAACCACTaGTTGTCATATTTGAAGGGGATGGTGCACGGCTTT +
Preference number: 6 (lower is better)
Translates to: SSRPVLVQPWNH*LSYLKGMVHGF
Trigger: AAAGCCGTGCACCATCCCCTTCAAATATGACAACCAGTGGTTCCACGGCTGCACCAGCACGGGCCGCGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 72 bp CTGTCCCGGAAGTTGTTGGGCTCAAAGGGGTGCCAGTaGGTGAAGCTCACAAGGCTCCCGTCAGACCACTCA +
Preference number: 6 (lower is better)
Translates to: LSRKLLGSKGCQ*VKLTRLPSDHS
Trigger: TGAGTGGTCTGACGGGAGCCTTGTGAGCTTCACCCACTGGCACCCCTTTGAGCCCAACAACTTCCGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CAA 90 bp TTGTCCGGCTGGTCACTCTCCCAGTTGAGGTACTTGAGGGGCGAGTaGTCCGACCACTGCCAGCCTCCGCTCGTGTCCAAGTCATTCAAG +
Preference number: 6 (lower is better)
Translates to: LSGWSLSQLRYLRGE*SDHCQPPLVSKSFK
Trigger: CTTGAATGACTTGGACACGAGCGGAGGCTGGCAGTGGTCGGACAACTCGCCCCTCAAGTACCTCAACTGGGAGAGTGACCAGCCGGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CAA 90 bp TACATGACTTCATCCCCACTGAGCCAGAAGAAGGAGCCGGTGCTGTaGAGGTCCTGCAGGGCCGTCCAGAAGTACTCGCCCTCCCAGTTG +
Preference number: 6 (lower is better)
Translates to: YMTSSPLSQKKEPVL*RSCRAVQKYSPSQL
Trigger: CAACTGGGAGGGCGAGTACTTCTGGACGGCCCTGCAGGACCTCAACAGCACCGGCTCCTTCTTCTGGCTCAGTGGGGATGAAGTCATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000584265.1
ENST00000584682.1
CDS CAA 90 bp CCCCAGTCCTCTCGGCTGGCTGTCATGTACACGCACTTCTTGTCCTaGCCGACAGGCCGAGGTTTGCCTGGTGCCCAGGAGATGAAGTTT +
Preference number: 6 (lower is better)
Translates to: PQSSRLAVMYTHFLS*PTGRGLPGAQEMKF
Trigger: AAACTTCATCTCCTGGGCACCAGGCAAACCTCGGCCTGTCGGCAAGGACAAGAAGTGCGTGTACATGACAGCCAGCCGAGAGGACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000579432.1
ENST00000583597.5
CDS GCA 72 bp GGATCCCGACGGTTCAGGCCGATCCAGAACCAGTGCTaGTCGTGGATCTCGGGTTCTGATTCACCGAAGATC +
Preference number: 6 (lower is better)
Translates to: GSRRFRPIQNQC*SWISGSDSPKI
Trigger: GATCTTCGGTGAATCAGAACCCGAGATCCACGAGCAGCACTGGTTCTGGATCGGCCTGAACCGTCGGGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS CCA 72 bp GGATGGTGCACGGCTTTCCGTGGGAGTTTCCCTGGATaGTGTAGACCTCGTGGTAGGGCAGAGCACATAGGT +
Preference number: 6 (lower is better)
Translates to: GWCTAFRGSFPG*CRPRGRAEHIG
Trigger: ACCTATGTGCTCTGCCCTACCACGAGGTCTACACCATCCAGGGAAACTCCCACGGAAAGCCGTGCACCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 72 bp ATCTGCTTGGTGATGAATTCCAGCTCCGCCATGCTGTaGATGCTGACCAGGTCGCCACCGCCCCGTAGACAT +
Preference number: 6 (lower is better)
Translates to: ICLVMNSSSAML*MLTRSPPPRRH
Trigger: ATGTCTACGGGGCGGTGGCGACCTGGTCAGCATCCACAGCATGGCGGAGCTGGAATTCATCACCAAGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CCA 72 bp CCTGTGTCCAGCTCCGAATTCAAGTCTTCTGGACCATaGAGACAGGTCCACCCCTCGCTGAGTCTAGCCTCG +
Preference number: 6 (lower is better)
Translates to: PVSSSEFKSSGP*RQVHPSLSLAS
Trigger: CGAGGCTAGACTCAGCGAGGGGTGGACCTGTCTCCATGGTCCAGAAGACTTGAATTCGGAGCTGGACACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS CCA 72 bp CTCAGGGCCTGTGTCCAGCTCCGAATTCAAGTCTTCTaGACCATGGAGACAGGTCCACCCCTCGCTGAGTCT +
Preference number: 6 (lower is better)
Translates to: LRACVQLRIQVF*TMETGPPLAES
Trigger: AGACTCAGCGAGGGGTGGACCTGTCTCCATGGTCCAGAAGACTTGAATTCGGAGCTGGACACAGGCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446119.2
CDS CCA 72 bp CAAATAAGGGGCTCACCGGGCTGGTCCCGGTTCCAGTaGGTGTACATGACTTCATCCCCACTGAGCCAGAAG +
Preference number: 6 (lower is better)
Translates to: QIRGSPGWSRFQ*VYMTSSPLSQK
Trigger: CTTCTGGCTCAGTGGGGATGAAGTCATGTACACCCACTGGAACCGGGACCAGCCCGGTGAGCCCCTTATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584265.1
CDS TCA 72 bp CCCGGAAGTTGTTGGGCTCAAAGGGGTGCCAGTGGGTaGAGCTCACAAGGCTCCCGTCAGACCACTCAAAAT +
Preference number: 6 (lower is better)
Translates to: PGSCWAQRGASG*SSQGSRQTTQN
Trigger: ATTTTGAGTGGTCTGACGGGAGCCTTGTGAGCTTCACCCACTGGCACCCCTTTGAGCCCAACAACTTCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp GTCACCCAGTGTACGACAATGCCAGCGAAGATTCAGTaGTTCCCGGTCACACTCATACATGCCCAGGGAGGC +
Preference number: 6 (lower is better)
Translates to: VTQCTTMPAKIQ*FPVTLIHAQGG
Trigger: GCCTCCCTGGGCATGTATGAGTGTGACCGGGAAGCACTGAATCTTCGCTGGCATTGTCGTACACTGGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp ATCAAAGGCTCCTGCTCCACCCACTGGAAGTCCCTCTaGGAGGCATGGAGGCCAATCCAAAGGTCAAAGGTC +
Preference number: 6 (lower is better)
Translates to: IKGSCSTHWKSL*EAWRPIQRSKV
Trigger: GACCTTTGACCTTTGGATTGGCCTCCATGCCTCGCAGAGGGACTTCCAGTGGGTGGAGCAGGAGCCTTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS GCA 72 bp GGATCCCGACGGTTCAGGCCGATCCAGAACCAGTGCTaGTCGTGGATCTCGGGTTCTGATTCAAAAGTGCTC +
Preference number: 6 (lower is better)
Translates to: GSRRFRPIQNQC*SWISGSDSKVL
Trigger: GAGCACTTTTGAATCAGAACCCGAGATCCACGAGCAGCACTGGTTCTGGATCGGCCTGAACCGTCGGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS GCA 72 bp CTGGGATCCCGACGGTTCAGGCCGATCCAGAACCAGTaGTGCTCGTGGATCTCGGGTTCTGATTCAAAAGTG +
Preference number: 6 (lower is better)
Translates to: LGSRRFRPIQNQ*CSWISGSDSKV
Trigger: CACTTTTGAATCAGAACCCGAGATCCACGAGCAGCACTGGTTCTGGATCGGCCTGAACCGTCGGGATCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS CCA 72 bp CAGTTGGCATACATCAAAGGCTCCTGCTCCACCCACTaGAAGTCCCTCTGCGAGGCATGGAGGCCAATCCAA +
Preference number: 6 (lower is better)
Translates to: QLAYIKGSCSTH*KSLCEAWRPIQ
Trigger: TTGGATTGGCCTCCATGCCTCGCAGAGGGACTTCCAGTGGGTGGAGCAGGAGCCTTTGATGTATGCCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CCA 72 bp CGACGGTTCAGGCCGATCCAGAACCAGTGCTGCTCGTaGATCTCGGGTTCTGATTCAAAAGTGCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: RRFRPIQNQCCS*ISGSDSKVLLL
Trigger: GAGGAGGAGCACTTTTGAATCAGAACCCGAGATCCACGAGCAGCACTGGTTCTGGATCGGCCTGAACCGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584682.1
CDS CAA 72 bp TCAGTGCGGATCACTCCACAGTTCTCCTCACTGGGGTaGTCCGGCTGGTCACTCTCCCAGTTGAGGTACTTG +
Preference number: 6 (lower is better)
Translates to: SVRITPQFSSLG*SGWSLSQLRYL
Trigger: CAAGTACCTCAACTGGGAGAGTGACCAGCCGGACAACCCCAGTGAGGAGAACTGTGGAGTGATCCGCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CAA 72 bp ATGGTGACACAGTCCTCCAGACTGTCCCGGAAGTTGTaGGGCTCAAAGGGGTGCCAGTGGGTGAAGCTCACA +
Preference number: 6 (lower is better)
Translates to: MVTQSSRLSRKL*GSKGCQWVKLT
Trigger: TGTGAGCTTCACCCACTGGCACCCCTTTGAGCCCAACAACTTCCGGGACAGTCTGGAGGACTGTGTCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS TCA 72 bp TGCTGGTGCAGCCGTGGAACCACTGGTTGTCATATTTaGAGGGGATGGTGCACGGCTTTCCGTGGGAGTTTC +
Preference number: 6 (lower is better)
Translates to: CWCSRGTTGCHI*RGWCTAFRGSF
Trigger: GAAACTCCCACGGAAAGCCGTGCACCATCCCCTTCAAATATGACAACCAGTGGTTCCACGGCTGCACCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp AGGAGCAAGGACAGCTGGTCACCCAGTGTACGACAATaGCAGCGAAGATTCAGTGCTTCCCGGTCACACTCA +
Preference number: 6 (lower is better)
Translates to: RSKDSWSPSVRQ*QRRFSASRSHS
Trigger: TGAGTGTGACCGGGAAGCACTGAATCTTCGCTGGCATTGTCGTACACTGGGTGACCAGCTGTCCTTGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp CCCTGGCCCTGCCCACGCGCCTGGCTCTATTCTTGTTaGTCATTCATTTCCATGTCTGACACCAGGATGTTC +
Preference number: 6 (lower is better)
Translates to: PWPCPRAWLYSC*SFISMSDTRMF
Trigger: GAACATCCTGGTGTCAGACATGGAAATGAATGAGCAACAAGAATAGAGCCAGGCGCGTGGGCAGGGCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CCA 72 bp CGACGGTTCAGGCCGATCCAGAACCAGTGCTGCTCGTaGATCTCGGGTTCTGATTCACCGAAGATCTTGTTG +
Preference number: 6 (lower is better)
Translates to: RRFRPIQNQCCS*ISGSDSPKILL
Trigger: CAACAAGATCTTCGGTGAATCAGAACCCGAGATCCACGAGCAGCACTGGTTCTGGATCGGCCTGAACCGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303375.10
CDS CCA 72 bp TTCACCAAGGCAAGTCAAATAAGGGGCTCACCGGGCTaGTCCCGGTTCCAGTGGGTGTACATGACTTCATCC +
Preference number: 6 (lower is better)
Translates to: FTKASQIRGSPG*SRFQWVYMTSS
Trigger: GGATGAAGTCATGTACACCCACTGGAACCGGGACCAGCCCGGTGAGCCCCTTATTTGACTTGCCTTGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584265.1
CDS CAA 72 bp GTGCTGGTGCAGCCGTGGAACCACTGGTTGTCATATTaGAAGGGGATGGTGCACGGCTTTCCGTGGGAGTTT +
Preference number: 6 (lower is better)
Translates to: VLVQPWNHWLSY*KGMVHGFPWEF
Trigger: AAACTCCCACGGAAAGCCGTGCACCATCCCCTTCAAATATGACAACCAGTGGTTCCACGGCTGCACCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS CAA 90 bp TCCCTCTGCGAGGCATGGAGGCCAATCCAAAGGTCAAAGGTCACATaGGGCAGGCTGGCTGTGATGAATGCTTGCTCTAAGGGGTTTGTG +
Preference number: 6 (lower is better)
Translates to: SLCEAWRPIQRSKVT*GRLAVMNACSKGFV
Trigger: CACAAACCCCTTAGAGCAAGCATTCATCACAGCCAGCCTGCCCAATGTGACCTTTGACCTTTGGATTGGCCTCCATGCCTCGCAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS TCA 72 bp CAGGAAGCCCAAGGGCAAAAAGACAAGCTCAAATTCTaGGTCCCAGGTGCTCCTGGTCCTTCCTGCCTCAAG +
Preference number: 6 (lower is better)
Translates to: QEAQGQKDKLKF*VPGAPGPSCLK
Trigger: CTTGAGGCAGGAAGGACCAGGAGCACCTGGGACTCAGAATTTGAGCTTGTCTTTTTGCCCTTGGGCTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446119.2
ENST00000579432.1
CDS GCA 72 bp TCTAAGGGGTTTGTGATGGTGACCAGCTGGGCCTCTTaGTGTTCACAGGAGAACTGTGCCTCTGACCACTTC +
Preference number: 6 (lower is better)
Translates to: SKGFVMVTSWAS*CSQENCASDHF
Trigger: GAAGTGGTCAGAGGCACAGTTCTCCTGTGAACAGCAAGAGGCCCAGCTGGTCACCATCACAAACCCCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CCA 72 bp GTTTATAATGGAACCATCTGTCCATCTGCAATGGCATaGAGCAGAGGTAACTCCAGCACCGGCCCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: VYNGTICPSAMA*SRGNSSTGPQL
Trigger: CAGCTGGGGGCCGGTGCTGGAGTTACCTCTGCTCCATGCCATTGCAGATGGACAGATGGTTCCATTATAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446119.2
ENST00000579432.1
CDS CCA 72 bp GCACTTCTTGTCCTTGCCGACAGGCCGAGGTTTGCCTaGTGCCCAGGAGATGAAGTTTATAATGGAACCATC +
Preference number: 6 (lower is better)
Translates to: ALLVLADRPRFA*CPGDEVYNGTI
Trigger: GATGGTTCCATTATAAACTTCATCTCCTGGGCACCAGGCAAACCTCGGCCTGTCGGCAAGGACAAGAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000579432.1
ENST00000583597.5
CDS CCA 72 bp AATGCTTGCTCTAAGGGGTTTGTGATGGTGACCAGCTaGGCCTCTTGCTGTTCACAGGAGAACTGTGCCTCT +
Preference number: 6 (lower is better)
Translates to: NACSKGFVMVTS*ASCCSQENCAS
Trigger: AGAGGCACAGTTCTCCTGTGAACAGCAAGAGGCCCAGCTGGTCACCATCACAAACCCCTTAGAGCAAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000583597.5
CDS CAA 90 bp GCTGTCATGTACACGCACTTCTTGTCCTTGCCGACAGGCCGAGGTTaGCCTGGTGCCCAGGAGATGAAGTTTATAATGGAACCATCTGTC +
Preference number: 6 (lower is better)
Translates to: AVMYTHFLSLPTGRG*PGAQEMKFIMEPSV
Trigger: GACAGATGGTTCCATTATAAACTTCATCTCCTGGGCACCAGGCAAACCTCGGCCTGTCGGCAAGGACAAGAAGTGCGTGTACATGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000579432.1
ENST00000583597.5
CDS CAA 90 bp AGGCTCCCGTCAGACCACTCAAAATTCATCTGCAGTTTCAAATCGTaGAGGCCGATCCACAGCTCCTCCACCTCTTGCTTGATCTGCTTG +
Preference number: 6 (lower is better)
Translates to: RLPSDHSKFICSFKS*RPIHSSSTSCLICL
Trigger: CAAGCAGATCAAGCAAGAGGTGGAGGAGCTGTGGATCGGCCTCAACGATTTGAAACTGCAGATGAATTTTGAGTGGTCTGACGGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp CTCACAAGGCTCCCGTCAGACCACTCAAAATTCATCTaGAGTTTCAAATCGTTGAGGCCGATCCACAGCTCC +
Preference number: 6 (lower is better)
Translates to: LTRLPSDHSKFI*SFKSLRPIHSS
Trigger: GGAGCTGTGGATCGGCCTCAACGATTTGAAACTGCAGATGAATTTTGAGTGGTCTGACGGGAGCCTTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1
CDS GCA 72 bp CTTCTTGTCCTTGCCGACAGGCCGAGGTTTGCCTGGTaGCCAGGAGATGAAGTTTATAATGGAACCATCTGT +
Preference number: 6 (lower is better)
Translates to: LLVLADRPRFAW*PGDEVYNGTIC
Trigger: ACAGATGGTTCCATTATAAACTTCATCTCCTGGGCACCAGGCAAACCTCGGCCTGTCGGCAAGGACAAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000579432.1
ENST00000583597.5
CDS CCA 72 bp ATGAAGTTTATAATGGAACCATCTGTCCATCTGCAATaGCATGGAGCAGAGGTAACTCCAGCACCGGCCCCC +
Preference number: 6 (lower is better)
Translates to: MKFIMEPSVHLQ*HGAEVTPAPAP
Trigger: GGGGGCCGGTGCTGGAGTTACCTCTGCTCCATGCCATTGCAGATGGACAGATGGTTCCATTATAAACTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446119.2
ENST00000579432.1
CDS CAA 72 bp TACACGCACTTCTTGTCCTTGCCGACAGGCCGAGGTTaGCCTGGTGCCCAGGAGATGAAGTTTATAATGGAA +
Preference number: 6 (lower is better)
Translates to: YTHFLSLPTGRG*PGAQEMKFIME
Trigger: TTCCATTATAAACTTCATCTCCTGGGCACCAGGCAAACCTCGGCCTGTCGGCAAGGACAAGAAGTGCGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303375.10
ENST00000446119.2
ENST00000579432.1
ENST00000583597.5
CDS CAA 72 bp TCAGACCACTCAAAATTCATCTGCAGTTTCAAATCGTaGAGGCCGATCCACAGCTCCTCCACCTCTTGCTTG +
Preference number: 6 (lower is better)
Translates to: SDHSKFICSFKS*RPIHSSSTSCL
Trigger: CAAGCAAGAGGTGGAGGAGCTGTGGATCGGCCTCAACGATTTGAAACTGCAGATGAATTTTGAGTGGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303375.10
ENST00000584265.1