RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MORC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000133422

Ensembl transcript IDs: ENST00000215862.8, ENST00000397641.8, ENST00000429468.5, ENST00000445980.5, ENST00000469915.1, ENST00000476152.2, ENST00000674576.1, ENST00000675027.1, ENST00000675317.1, ENST00000675402.1, ENST00000675570.1, ENST00000675601.1, ENST00000675779.1, ENST00000675798.1, ENST00000676215.1, ENST00000676263.1

Found 809 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCTCAGGGCAGTGGTGTCAGGCTCAATGCGGAGGCATTCGGAAGTaGAGGGCTCTGCGACAGCTATGGCCTGCTGGGCCACAGGGCCCA +
Preference number: 1 (lower is better)
Translates to: CSGQWCQAQCGGIRK*RALRQLWPAGPQGP
Trigger: TGGGCCCTGTGGCCCAGCAGGCCATAGCTGTCGCAGAGCCCTCCACTTCCGAATGCCTCCGCATTGAGCCTGACACCACTGCCCTGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR CCA 90 bp CGCGGAGCTTCCTCTCGGAGGTGCGCAGGCTTTCCTCGGAGGCCTTaGCCCGGGAGTCAGCACGGCTCTGGTAGGAATTGCACAGGTTTT +
Preference number: 1 (lower is better)
Translates to: RGASSRRCAGFPRRP*PGSQHGSGRNCTGF
Trigger: AAAACCTGTGCAATTCCTACCAGAGCCGTGCTGACTCCCGGGCCAAGGCCTCCGAGGAAAGCCTGCGCACCTCCGAGAGGAAGCTCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR CCA 90 bp GGAAGGCATGGTGTGCTTCCTGCAGAGATGCCTCTGGAGTCCCTGTaGCCACGGGATCTCACTGGCCCCCTCTTCAGGCACCTTGATGGG +
Preference number: 1 (lower is better)
Translates to: GRHGVLPAEMPLESL*PRDLTGPLFRHLDG
Trigger: CCCATCAAGGTGCCTGAAGAGGGGGCCAGTGAGATCCCGTGGCCACAGGGACTCCAGAGGCATCTCTGCAGGAAGCACACCATGCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CCA 90 bp GGAACATGGAGGGAAGGCATGGTGTGCTTCCTGCAGAGATGCCTCTaGAGTCCCTGTGGCCACGGGATCTCACTGGCCCCCTCTTCAGGC +
Preference number: 1 (lower is better)
Translates to: GTWREGMVCFLQRCL*SPCGHGISLAPSSG
Trigger: GCCTGAAGAGGGGGCCAGTGAGATCCCGTGGCCACAGGGACTCCAGAGGCATCTCTGCAGGAAGCACACCATGCCTTCCCTCCATGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR GCA 90 bp CGTGATGGAACATGGAGGGAAGGCATGGTGTGCTTCCTGCAGAGATaGCTCTGGAGTCCCTGTGGCCACGGGATCTCACTGGCCCCCTCT +
Preference number: 1 (lower is better)
Translates to: RDGTWREGMVCFLQR*LWSPCGHGISLAPS
Trigger: AGAGGGGGCCAGTGAGATCCCGTGGCCACAGGGACTCCAGAGGCATCTCTGCAGGAAGCACACCATGCCTTCCCTCCATGTTCCATCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR GCA 90 bp CACAGATTGTGGCGCCGTGATGGAACATGGAGGGAAGGCATGGTGTaGTTCCTGCAGAGATGCCTCTGGAGTCCCTGTGGCCACGGGATC +
Preference number: 1 (lower is better)
Translates to: HRLWRRDGTWREGMV*FLQRCLWSPCGHGI
Trigger: GATCCCGTGGCCACAGGGACTCCAGAGGCATCTCTGCAGGAAGCACACCATGCCTTCCCTCCATGTTCCATCACGGCGCCACAATCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR GCA 90 bp CGATGGTCTCGTGATTGGTGCTCAGGGCAGTGGTGTCAGGCTCAATaGGGAGGCATTCGGAAGTGGAGGGCTCTGCGACAGCTATGGCCT +
Preference number: 1 (lower is better)
Translates to: RWSRDWCSGQWCQAQ*GGIRKWRALRQLWP
Trigger: AGGCCATAGCTGTCGCAGAGCCCTCCACTTCCGAATGCCTCCGCATTGAGCCTGACACCACTGCCCTGAGCACCAATCACGAGACCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR CCA 90 bp AGGGACACAGATTGTGGCGCCGTGATGGAACATGGAGGGAAGGCATaGTGTGCTTCCTGCAGAGATGCCTCTGGAGTCCCTGTGGCCACG +
Preference number: 1 (lower is better)
Translates to: RDTDCGAVMEHGGKA*CASCRDASGVPVAT
Trigger: CGTGGCCACAGGGACTCCAGAGGCATCTCTGCAGGAAGCACACCATGCCTTCCCTCCATGTTCCATCACGGCGCCACAATCTGTGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR GCA 90 bp AAGCATCAACAGGCTGTCCAGATCAATTGGCACCATCCAAGGCCCTaGTGCACCCACACATGGAGGTCACCAGCTCAGCCCCAGGGGTTC +
Preference number: 1 (lower is better)
Translates to: KHQQAVQINWHHPRP*CTHTWRSPAQPQGF
Trigger: GAACCCCTGGGGCTGAGCTGGTGACCTCCATGTGTGGGTGCAGCAGGGCCTTGGATGGTGCCAATTGATCTGGACAGCCTGTTGATGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR GCA 90 bp TCTATGTCCTTTTGCAGGAGTGCCACGATGTTGGTCCTCAGCTTCTaGAGCTTCTCCTCCGTCTCGCGGAGCTTCCTCTCGGAGGTGCGC +
Preference number: 1 (lower is better)
Translates to: SMSFCRSATMLVLSF*SFSSVSRSFLSEVR
Trigger: GCGCACCTCCGAGAGGAAGCTCCGCGAGACGGAGGAGAAGCTGCAGAAGCTGAGGACCAACATCGTGGCACTCCTGCAAAAGGACATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR CCA 90 bp TCTGGACAAGCAGGTCGATGGTCTCGTGATTGGTGCTCAGGGCAGTaGTGTCAGGCTCAATGCGGAGGCATTCGGAAGTGGAGGGCTCTG +
Preference number: 1 (lower is better)
Translates to: SGQAGRWSRDWCSGQ*CQAQCGGIRKWRAL
Trigger: CAGAGCCCTCCACTTCCGAATGCCTCCGCATTGAGCCTGACACCACTGCCCTGAGCACCAATCACGAGACCATCGACCTGCTTGTCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR CCA 90 bp AGGAGAAAAGTCAGCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTaGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAATGGCTCCG +
Preference number: 1 (lower is better)
Translates to: RRKVSPAPGASPRWH*TRRYLEEPGAEMAP
Trigger: CGGAGCCATTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGCTGACTTTTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CCA 90 bp CCTCACTGCCTTTCTCCACCCAGCGGTCTCTTGGTGTCGTGTCTGTaGGCACGTAGTCAAACTTCACCTTCCACCGCACCACATGCTTGC +
Preference number: 1 (lower is better)
Translates to: PHCLSPPSGLLVSCL*ARSQTSPSTAPHAC
Trigger: GCAAGCATGTGGTGCGGTGGAAGGTGAAGTTTGACTACGTGCCCACAGACACGACACCAAGAGACCGCTGGGTGGAGAAAGGCAGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR GCA 90 bp AATTCCGGAGGATCTGGACAAGCAGGTCGATGGTCTCGTGATTGGTaGTCAGGGCAGTGGTGTCAGGCTCAATGCGGAGGCATTCGGAAG +
Preference number: 1 (lower is better)
Translates to: NSGGSGQAGRWSRDW*SGQWCQAQCGGIRK
Trigger: CTTCCGAATGCCTCCGCATTGAGCCTGACACCACTGCCCTGAGCACCAATCACGAGACCATCGACCTGCTTGTCCAGATCCTCCGGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR CCA 90 bp AACAATTCCGGAGGATCTGGACAAGCAGGTCGATGGTCTCGTGATTaGTGCTCAGGGCAGTGGTGTCAGGCTCAATGCGGAGGCATTCGG +
Preference number: 1 (lower is better)
Translates to: NNSGGSGQAGRWSRD*CSGQWCQAQCGGIR
Trigger: CCGAATGCCTCCGCATTGAGCCTGACACCACTGCCCTGAGCACCAATCACGAGACCATCGACCTGCTTGTCCAGATCCTCCGGAATTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR TCA 90 bp TCTTTTTCCCTCAAGCTGTTTGGACGCCACAGCCAGGACCAACTCTaGCAGCTGCGAGAGAGAGAGCCCCTCCAATGTGGAACCTCCTAC +
Preference number: 1 (lower is better)
Translates to: SFSLKLFGRHSQDQL*QLREREPLQCGTSY
Trigger: GTAGGAGGTTCCACATTGGAGGGGCTCTCTCTCTCGCAGCTGTCAGAGTTGGTCCTGGCTGTGGCGTCCAAACAGCTTGAGGGAAAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR TCA 90 bp CGTAAACAATTCCGGAGGATCTGGACAAGCAGGTCGATGGTCTCGTaGTTGGTGCTCAGGGCAGTGGTGTCAGGCTCAATGCGGAGGCAT +
Preference number: 1 (lower is better)
Translates to: RKQFRRIWTSRSMVS*LVLRAVVSGSMRRH
Trigger: ATGCCTCCGCATTGAGCCTGACACCACTGCCCTGAGCACCAATCACGAGACCATCGACCTGCTTGTCCAGATCCTCCGGAATTGTTTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR CCA 90 bp TCCTGTAGGAGAAAAGTCAGCCCTGCCCCTGGAGCTTCTCCAAGATaGCACTGGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAATG +
Preference number: 1 (lower is better)
Translates to: SCRRKVSPAPGASPR*HWTRRYLEEPGAEM
Trigger: CATTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGCTGACTTTTCTCCTACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CCA 90 bp CAGTCTTCTGCTGACCTCAGAGGAGCAGGGTGGCCATTGCTGATCTaGGTTAGGGAGATGCCAGAAACACACCCAGGTTTGAACCACAGG +
Preference number: 1 (lower is better)
Translates to: QSSADLRGAGWPLLI*VREMPETHPGLNHR
Trigger: CCTGTGGTTCAAACCTGGGTGTGTTTCTGGCATCTCCCTAACCCAGATCAGCAATGGCCACCCTGCTCCTCTGAGGTCAGCAGAAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR GCA 90 bp AGCTCCTTCCCTAAGGAGTCCTGTGGGGTTCCACACTCAGTGTGCTaGCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCT +
Preference number: 1 (lower is better)
Translates to: SSFPKESCGVPHSVC*PSQRFTTDLSPPQP
Trigger: AGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCACACTGAGTGTGGAACCCCACAGGACTCCTTAGGGAAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CCA 90 bp GATGGCACTGGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAATaGCTCCGGCTTAGCAACCCAGTATGGCCAAAGTGGAAAGGTTCT +
Preference number: 1 (lower is better)
Translates to: DGTGLAVILRSQELK*LRLSNPVWPKWKGS
Trigger: AGAACCTTTCCACTTTGGCCATACTGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CCA 90 bp CGAAGGGTGGAAGTAGAAAAGCATCAACAGGCTGTCCAGATCAATTaGCACCATCCAAGGCCCTGCTGCACCCACACATGGAGGTCACCA +
Preference number: 1 (lower is better)
Translates to: RRVEVEKHQQAVQIN*HHPRPCCTHTWRSP
Trigger: TGGTGACCTCCATGTGTGGGTGCAGCAGGGCCTTGGATGGTGCCAATTGATCTGGACAGCCTGTTGATGCTTTTCTACTTCCACCCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CCA 90 bp GGAAGTACCGTAAACAATTCCGGAGGATCTGGACAAGCAGGTCGATaGTCTCGTGATTGGTGCTCAGGGCAGTGGTGTCAGGCTCAATGC +
Preference number: 1 (lower is better)
Translates to: GSTVNNSGGSGQAGR*SRDWCSGQWCQAQC
Trigger: GCATTGAGCCTGACACCACTGCCCTGAGCACCAATCACGAGACCATCGACCTGCTTGTCCAGATCCTCCGGAATTGTTTACGGTACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR GCA 90 bp ACAAGCTCCTTCCCTAAGGAGTCCTGTGGGGTTCCACACTCAGTGTaGTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAA +
Preference number: 1 (lower is better)
Translates to: TSSFPKESCGVPHSV*CPSQRFTTDLSPPQ
Trigger: TTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCACACTGAGTGTGGAACCCCACAGGACTCCTTAGGGAAGGAGCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CCA 90 bp CTCTCAGTGTACTACTCCAAACAGGCCTCTCCTAGAGATGTAGTCTaGGAAGGTCCAAAACCCACCAGACAGGCACATCCAGTGGGGAAA +
Preference number: 1 (lower is better)
Translates to: LSVYYSKQASPRDVV*EGPKPTRQAHPVGK
Trigger: TTTCCCCACTGGATGTGCCTGTCTGGTGGGTTTTGGACCTTCCCAGACTACATCTCTAGGAGAGGCCTGTTTGGAGTAGTACACTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR GCA 90 bp CCCAGGTTTGAACCACAGGTTAGTGGTACAAAGTCACAGTCCTTGTaGCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAG +
Preference number: 1 (lower is better)
Translates to: PRFEPQVSGTKSQSL*LQKTQRPQIRVGRE
Trigger: CTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGACTGTGACTTTGTACCACTAACCTGTGGTTCAAACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR TCA 90 bp CACTGTCCATGGTTAACTGAAGAAATCCCTCCTTCAGAAAGAACTTaGGTAGTAGATGAGGTGGTTAGACAGGATCTTTTTCCCTCAAGC +
Preference number: 1 (lower is better)
Translates to: HCPWLTEEIPPSERT*VVDEVVRQDLFPSS
Trigger: GCTTGAGGGAAAAAGATCCTGTCTAACCACCTCATCTACTACTCAAGTTCTTTCTGAAGGAGGGATTTCTTCAGTTAACCATGGACAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR GCA 90 bp TTCAGAGGAAAAGATATTAGCTCATCTGAATTCATAGCACTCAGCTaGTTCTTGGAGATGGGGAAACTTGGAGGCAGGAAGTACCGTAAA +
Preference number: 1 (lower is better)
Translates to: FRGKDISSSEFIALS*FLEMGKLGGRKYRK
Trigger: TTTACGGTACTTCCTGCCTCCAAGTTTCCCCATCTCCAAGAAGCAGCTGAGTGCTATGAATTCAGATGAGCTAATATCTTTTCCTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR GCA 90 bp GGAGCTTCCTCTCGGAGGTGCGCAGGCTTTCCTCGGAGGCCTTGGCCCGGGAGTGAAGTCCCCTCCCCCTaGAGCTACAGGGTTGAGGGG +
Preference number: 2 (lower is better)
Translates to: GASSRRCAGFPRRPWPGSEVPSP*SYRVEG
Trigger: CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTC...ACTCCCGGGCCAAGGCCTCCGAGGAAAGCCTGCGCACCTCCGAGAGGAAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR GCA 90 bp GGAGCTTCCTCTCGGAGGTGCGCAGGCTTTCCTCGGAGGCCTTGGCCCGGGAGTTTCCACCGCACCACATaGTTGCCCACCTCCACGGCT +
Preference number: 2 (lower is better)
Translates to: GASSRRCAGFPRRPWPGSFHRTT*LPTSTA
Trigger: AGCCGTGGAGGTGGGCAAGCATGTGGTGCGGTGGAA...ACTCCCGGGCCAAGGCCTCCGAGGAAAGCCTGCGCACCTCCGAGAGGAAGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR TCA 90 bp CAGCCGCACATCCTCACTGCCTTTCTCCACCCAGCGGTCTCTTGGTGTCGTGTCCCACCTCCACGGCTGTaGCACGGCCCGTGTACCACT +
Preference number: 2 (lower is better)
Translates to: QPHILTAFLHPAVSWCRVPPPRL*HGPCTT
Trigger: AGTGGTACACGGGCCGTGTCACAGCCGTGGAGGTGG...GACACGACACCAAGAGACCGCTGGGTGGAGAAAGGCAGTGAGGATGTGCGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR TCA 90 bp AGGCTCAATGCGGAGGCATTCGGAAGTGGAGGGCTCTGCGACAGCTATGGCCTGCCACCAACCCATGAATaGAGTCCCCTCCCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: RLNAEAFGSGGLCDSYGLPPTHE*SPLPLQ
Trigger: CTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGG...CAGGCCATAGCTGTCGCAGAGCCCTCCACTTCCGAATGCCTCCGCATTGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR TCA 90 bp GCTCAATGCGGAGGCATTCGGAAGTGGAGGGCTCTGCGACAGCTATGGCCTGCTGCGACCACCAACCCATaGATGAAGTCCCCTCCCCCT +
Preference number: 2 (lower is better)
Translates to: AQCGGIRKWRALRQLWPAATTNP*MKSPPP
Trigger: AGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGC...AGCAGGCCATAGCTGTCGCAGAGCCCTCCACTTCCGAATGCCTCCGCATTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR CCA 90 bp TTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACTCCAAACAGGCCTCTCCCTTGATGGGGCTCAGTaGGGCCAGGCCGAAGGGTGG +
Preference number: 2 (lower is better)
Translates to: FQQKRPGSLSVLLQTGLSLDGAQ*GQAEGW
Trigger: CCACCCTTCGGCCTGGCCCCACTGAGCCCCATCAAG...GGAGAGGCCTGTTTGGAGTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR TCA 90 bp GTTAAGGGACACAGATTGTGGCGCCGTGATGGAACATGGAGGGAAGGCATGGTGTTGGGTCCCTGGATATaGGCCCCCAGCAGGACCACC +
Preference number: 2 (lower is better)
Translates to: VKGHRLWRRDGTWREGMVLGPWI*APSRTT
Trigger: GGTGGTCCTGCTGGGGGCTCATATCCAGGGACCCAA...CACCATGCCTTCCCTCCATGTTCCATCACGGCGCCACAATCTGTGTCCCTTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CAA 90 bp CTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCCGTTATCTaGAGGAGCCAGGAGCTGAAATGGCTCCGGCTTAGCAACCCAGTA +
Preference number: 2 (lower is better)
Translates to: LPLELLQDGTGLAVI*RSQELKWLRLSNPV
Trigger: TACTGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR GCA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCGAAGTCCCCTCCCCCTaGAGCTACAGGGTTGAGGGG +
Preference number: 2 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLEVPSP*SYRVEG
Trigger: CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTC...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR TCA 90 bp AGCCAGGAGCTGAAATGGCTCCGGCTTAGCAACCCAGTATGGCCAAAGTGGAAACCACCAACCCATGAATaGAGTCCCCTCCCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: SQELKWLRLSNPVWPKWKPPTHE*SPLPLQ
Trigger: CTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGG...TTTCCACTTTGGCCATACTGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR TCA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCGCGACCACCAACCCATaGATGAAGTCCCCTCCCCCT +
Preference number: 2 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLATTNP*MKSPPP
Trigger: AGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGC...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR GCA 90 bp CCAAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACCACCATCCAAGGCCCTaGTGCACCCACACATGGAGG +
Preference number: 2 (lower is better)
Translates to: PRLGQSSSRRGQGLSVYYHHPRP*CTHTWR
Trigger: CCTCCATGTGTGGGTGCAGCAGGGCCTTGGATGGTG...GTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CAA 90 bp CCGAAGGGTGGAAGTAGAAAAGCATCAACAGGCTGTCCAGATCAATaGGCACCATCCAAGGCCCTGCTGCACCCACACATGGAGGTCACC +
Preference number: 2 (lower is better)
Translates to: PKGGSRKASTGCPDQ*APSKALLHPHMEVT
Trigger: GGTGACCTCCATGTGTGGGTGCAGCAGGGCCTTGGATGGTGCCAATTGATCTGGACAGCCTGTTGATGCTTTTCTACTTCCACCCTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR TCA 90 bp TTCCGGAGAAGGGGGTTTCATCAGCCGCACATCCTCACTGCCTTTCTCCACCCACTTTCTGAGCTCTCTTaGGGTCAGCCGAGTCCTCTT +
Preference number: 2 (lower is better)
Translates to: FRRRGFHQPHILTAFLHPLSELS*GQPSPL
Trigger: AAGAGGACTCGGCTGACCTCAAGAGAGCTCAGAAAG...TGGGTGGAGAAAGGCAGTGAGGATGTGCGGCTGATGAAACCCCCTTCTCCGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR GCA 90 bp AGGGCAGTGGTGTCAGGCTCAATGCGGAGGCATTCGGAAGTGGAGGGCTCTGCGTGTCTGAGAGCCTTCTaGTACCTTTACGAACAAGAC +
Preference number: 2 (lower is better)
Translates to: RAVVSGSMRRHSEVEGSACLRAF*YLYEQD
Trigger: GTCTTGTTCGTAAAGGTAGCAGAAGGCTCTCAGACA...CGCAGAGCCCTCCACTTCCGAATGCCTCCGCATTGAGCCTGACACCACTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR CCA 90 bp TCCAGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCGGAGCTTCTCCAAGATaGCACTGGACTCGCCGTTAT +
Preference number: 2 (lower is better)
Translates to: SSGEKTSHSSVACIPHLCGASPR*HWTRRY
Trigger: ATAACGGCGAGTCCAGTGCCATCTTGGAGAAGCTCC...GCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR CCA 90 bp TTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACTCCAAACAGGCCTCTCCCTTCCCATTCCAGTGTaGCCTGCATCCCTCACCTCT +
Preference number: 2 (lower is better)
Translates to: FQQKRPGSLSVLLQTGLSLPIPV*PASLTS
Trigger: AGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAG...GGAGAGGCCTGTTTGGAGTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR GCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCGAAGTCCCCTCCCCCTaGAGCTACAGGGTTGAGGGG +
Preference number: 2 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVEVPSP*SYRVEG
Trigger: CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTC...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675570.1
ENST00000675779.1
3UTR-3UTR CCA 90 bp CTTGCCTTTGTCTTTGACCCTGAGAAGTTAAGGGACACAGATTGTGGCGCCGTGAGTCAGCCCTGCCCCTaGAGCTTCTCCAAGATGGCA +
Preference number: 2 (lower is better)
Translates to: LAFVFDPEKLRDTDCGAVSQPCP*SFSKMA
Trigger: TGCCATCTTGGAGAAGCTCCAGGGGCAGGGCTGACT...CACGGCGCCACAATCTGTGTCCCTTAACTTCTCAGGGTCAAAGACAAAGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR CCA 90 bp TCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGAGAGCCCCTCCAATGTaGAACCTCCTACACAGCCCC +
Preference number: 2 (lower is better)
Translates to: SLCLQKTQRPQIRVGRELRAPPM*NLLHSP
Trigger: GGGGCTGTGTAGGAGGTTCCACATTGGAGGGGCTCT...CAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR CCA 90 bp TGGGGAAACTTGGAGGCAGGAAGTACCGTAAACAATTCCGGAGGATCTGGACAACACCCAGCGGTCTCTTaGTGTCGTGTCTGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: WGNLEAGSTVNNSGGSGQHPAVS*CRVCGH
Trigger: GTGCCCACAGACACGACACCAAGAGACCGCTGGGTG...TTGTCCAGATCCTCCGGAATTGTTTACGGTACTTCCTGCCTCCAAGTTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR TCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCCCACCAACCCATGAATaGAGTCCCCTCCCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVPPTHE*SPLPLQ
Trigger: CTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGG...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675570.1
ENST00000675779.1
3UTR-3UTR TCA 90 bp GAGGAATCACCAGCTCAAGAAACCCCAAGACTTGGACAGTCTTCCAGCAGAAGACAGATTGTGGCGCCGTaGTGGAACATGGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: EESPAQETPRLGQSSSRRQIVAP*WNMEGR
Trigger: CCTTCCCTCCATGTTCCATCACGGCGCCACAATCTG...TCTTCTGCTGGAAGACTGTCCAAGTCTTGGGGTTTCTTGAGCTGGTGATTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR TCA 90 bp ATGTTCCGGAGAAGGGGGTTTCATCAGCCGCACATCCTCACTGCCTTTCTCCACAGCCCTTTATCTTTCTaGGCTCTCTTGAGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: MFRRRGFHQPHILTAFLHSPLSF*ALLRSA
Trigger: GGCTGACCTCAAGAGAGCTCAGAAAGATAAAGGGCT...GTGGAGAAAGGCAGTGAGGATGTGCGGCTGATGAAACCCCCTTCTCCGGAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR GCA 90 bp TTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGGAAGGGAAGGCATGGTGTaGTTCCTGCAGAGATGCCTC +
Preference number: 2 (lower is better)
Translates to: LCLQKTQRPQIRVGRELGREGMV*FLQRCL
Trigger: GAGGCATCTCTGCAGGAAGCACACCATGCCTTCCCT...TCCCAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR CCA 90 bp TCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGAGCCAGGAGCTGAAATaGCTCCGGCTTAGCAACCCA +
Preference number: 2 (lower is better)
Translates to: SLCLQKTQRPQIRVGRELSQELK*LRLSNP
Trigger: TGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCT...CAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR CCA 90 bp AAAAGCATCAACAGGCTGTCCAGATCAATTGGCACCATCCAAGGCCCTGCTGCATTCCCTCAAGCTGTTTaGACGCCACAGCCAGGACCA +
Preference number: 2 (lower is better)
Translates to: KSINRLSRSIGTIQGPAAFPQAV*TPQPGP
Trigger: TGGTCCTGGCTGTGGCGTCCAAACAGCTTGAGGGAA...TGCAGCAGGGCCTTGGATGGTGCCAATTGATCTGGACAGCCTGTTGATGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR CCA 90 bp TTCCGGAGAAGGGGGTTTCATCAGCCGCACATCCTCACTGCCTTTCTCCACCCATTGGTGTCGTGTCTGTaGGCACGTAGTCAAACTTCA +
Preference number: 2 (lower is better)
Translates to: FRRRGFHQPHILTAFLHPLVSCL*ARSQTS
Trigger: TGAAGTTTGACTACGTGCCCACAGACACGACACCAA...TGGGTGGAGAAAGGCAGTGAGGATGTGCGGCTGATGAAACCCCCTTCTCCGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR CAA 90 bp GTAGTAGATGAGGTGGTTAGACAGGATCTTTTTCCCTCAAGCTGTTaGGACGCCACAGCCAGGACCAACTCTGACAGCTGCGAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: VVDEVVRQDLFPSSC*DATARTNSDSCERE
Trigger: CTCTCTCTCGCAGCTGTCAGAGTTGGTCCTGGCTGTGGCGTCCAAACAGCTTGAGGGAAAAAGATCCTGTCTAACCACCTCATCTACTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR TCA 90 bp GTTAAGGGACACAGATTGTGGCGCCGTGATGGAACATGGAGGGAAGGCATGGTGCTCAAGTTACTGTGGTaGGAAACCTCACTGTCCATG +
Preference number: 2 (lower is better)
Translates to: VKGHRLWRRDGTWREGMVLKLLW*ETSLSM
Trigger: CATGGACAGTGAGGTTTCTCACCACAGTAACTTGAG...CACCATGCCTTCCCTCCATGTTCCATCACGGCGCCACAATCTGTGTCCCTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR TCA 90 bp GGAAGTACCGTAAACAATTCCGGAGGATCTGGACAAGCAGGTCGATGGTCTCGTTTCCCCAGCACTGTCTaGGAGCCTTCTGCTACCTTT +
Preference number: 2 (lower is better)
Translates to: GSTVNNSGGSGQAGRWSRFPSTV*EPSATF
Trigger: AAAGGTAGCAGAAGGCTCTCAGACAGTGCTGGGGAA...ACGAGACCATCGACCTGCTTGTCCAGATCCTCCGGAATTGTTTACGGTACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR CCA 90 bp TGGGGAAACTTGGAGGCAGGAAGTACCGTAAACAATTCCGGAGGATCTGGACAACGATGGTCTCGTGATTaGTGCTCAGGGCAGTGGTGT +
Preference number: 2 (lower is better)
Translates to: WGNLEAGSTVNNSGGSGQRWSRD*CSGQWC
Trigger: ACACCACTGCCCTGAGCACCAATCACGAGACCATCG...TTGTCCAGATCCTCCGGAATTGTTTACGGTACTTCCTGCCTCCAAGTTTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR CAA 90 bp CTTGGCCCGGGAGTCAGCACGGCTCTGGTAGGAATTGCACAGGTTTaGGAGCCCTACTTCATATTGCTTGAAGTACTCCTTCAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: LGPGVSTALVGIAQV*EPYFILLEVLLQRK
Trigger: TTTCCTCTGAAGGAGTACTTCAAGCAATATGAAGTAGGGCTCCAAAACCTGTGCAATTCCTACCAGAGCCGTGCTGACTCCCGGGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR CAA 90 bp ACACCCAGGTTTGAACCACAGGTTAGTGGTACAAAGTCACAGTCCTaGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGA +
Preference number: 2 (lower is better)
Translates to: TPRFEPQVSGTKSQS*CLQKTQRPQIRVGR
Trigger: TCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGACTGTGACTTTGTACCACTAACCTGTGGTTCAAACCTGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR CCA 90 bp GTAGTAGATGAGGTGGTTAGACAGGATCTTTTTCCCTCAAGCTGTTTGGACGCCTCTCCAAGATGGCACTaGACTCGCCGTTATCTTGAG +
Preference number: 2 (lower is better)
Translates to: VVDEVVRQDLFPSSCLDASPRWH*TRRYLE
Trigger: CTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGA...GGCGTCCAAACAGCTTGAGGGAAAAAGATCCTGTCTAACCACCTCATCTACTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR CCA 90 bp AGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCTTCACCAGACTCTTCCAATaGCCATTAAAGAGAAAATTC +
Preference number: 2 (lower is better)
Translates to: SGEKTSHSSVACIPHLCFTRLFQ*PLKRKF
Trigger: GAATTTTCTCTTTAATGGCCATTGGAAGAGTCTGGT...GAAGCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR TCA 90 bp ATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCTCTCTTCCACAGACTGGCAGGCTGTaGGAGCAGGAACCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: MSMSVSPYEPPSVILSLPQTGRL*EQEPSL
Trigger: CAGAGAAGGTTCCTGCTCTCACAGCCTGCCAGTCTG...TGGAAGAGAGAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675779.1
3UTR GCA 72 bp CATTCGGAAGTGGAGGGCTCTGCGACAGCTATGGCCTaGTGGGCCACAGGGCCCACCTCCTCCTCCCCGCCC +
Preference number: 3 (lower is better)
Translates to: HSEVEGSATAMA*WATGPTSSSPP
Trigger: GGGCGGGGAGGAGGAGGTGGGCCCTGTGGCCCAGCAGGCCATAGCTGTCGCAGAGCCCTCCACTTCCGAATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR GCA 72 bp GCTTCTCCTCCGTCTCGCGGAGCTTCCTCTCGGAGGTaGGCAGGCTTTCCTCGGAGGCCTTGGCCCGGGAGT +
Preference number: 3 (lower is better)
Translates to: ASPPSRGASSRR*AGFPRRPWPGS
Trigger: ACTCCCGGGCCAAGGCCTCCGAGGAAAGCCTGCGCACCTCCGAGAGGAAGCTCCGCGAGACGGAGGAGAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR CAA 90 bp CAGCTTCTCCTCCGTCTCGCGGAGCTTCCTCTCGGAGGTGCGCAGGCTTTCCTCCACCGCACCACATGCTaGCCCACCTCCACGGCTGTG +
Preference number: 3 (lower is better)
Translates to: QLLLRLAELPLGGAQAFLHRTTC*PTSTAV
Trigger: CACAGCCGTGGAGGTGGGCAAGCATGTGGTGCGGTG...GAGGAAAGCCTGCGCACCTCCGAGAGGAAGCTCCGCGAGACGGAGGAGAAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR CAA 90 bp GGAGCTTCCTCTCGGAGGTGCGCAGGCTTTCCTCGGAGGCCTTGGCCCGGGAGTCTCCCCGCCCTCCTGTaGTGTATCAAGGCTCTGATG +
Preference number: 3 (lower is better)
Translates to: GASSRRCAGFPRRPWPGSLPALL*CIKALM
Trigger: CATCAGAGCCTTGATACACAACAGGAGGGCGGGGAG...ACTCCCGGGCCAAGGCCTCCGAGGAAAGCCTGCGCACCTCCGAGAGGAAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR TCA 72 bp TCCACCGCACCACATGCTTGCCCACCTCCACGGCTGTaGCACGGCCCGTGTACCACTCCCTGTTCACACGCA +
Preference number: 3 (lower is better)
Translates to: STAPHACPPPRL*HGPCTTPCSHA
Trigger: TGCGTGTGAACAGGGAGTGGTACACGGGCCGTGTCACAGCCGTGGAGGTGGGCAAGCATGTGGTGCGGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR CCA 72 bp GGTGTGCTTCCTGCAGAGATGCCTCTGGAGTCCCTGTaGCCACGGGATCTCACTGGCCCCCTCTTCAGGCAC +
Preference number: 3 (lower is better)
Translates to: GVLPAEMPLESL*PRDLTGPLFRH
Trigger: GTGCCTGAAGAGGGGGCCAGTGAGATCCCGTGGCCACAGGGACTCCAGAGGCATCTCTGCAGGAAGCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CCA 72 bp AGGGAAGGCATGGTGTGCTTCCTGCAGAGATGCCTCTaGAGTCCCTGTGGCCACGGGATCTCACTGGCCCCC +
Preference number: 3 (lower is better)
Translates to: REGMVCFLQRCL*SPCGHGISLAP
Trigger: GGGGGCCAGTGAGATCCCGTGGCCACAGGGACTCCAGAGGCATCTCTGCAGGAAGCACACCATGCCTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR-3UTR CAA 90 bp GCTCAATGCGGAGGCATTCGGAAGTGGAGGGCTCTGCGACAGCTATGGCCTGCTCCACCCAGCGGTCTCTaGGTGTCGTGTCTGTGGGCA +
Preference number: 3 (lower is better)
Translates to: AQCGGIRKWRALRQLWPAPPSGL*VSCLWA
Trigger: TGCCCACAGACACGACACCAAGAGACCGCTGGGTGG...AGCAGGCCATAGCTGTCGCAGAGCCCTCCACTTCCGAATGCCTCCGCATTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR CCA 72 bp CAGTGGTGTCAGGCTCAATGCGGAGGCATTCGGAAGTaGAGGGCTCTGCGACAGCTATGGCCTGCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: QWCQAQCGGIRK*RALRQLWPAGP
Trigger: TGGCCCAGCAGGCCATAGCTGTCGCAGAGCCCTCCACTTCCGAATGCCTCCGCATTGAGCCTGACACCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR CAA 90 bp TCCAGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCCCCTCTTCAGGCACCTaGATGGGGCTCAGTGGGGCC +
Preference number: 3 (lower is better)
Translates to: SSGEKTSHSSVACIPHLCPSSGT*MGLSGA
Trigger: GGCCCCACTGAGCCCCATCAAGGTGCCTGAAGAGGG...GCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR GCA 72 bp CAGGCTGTCCAGATCAATTGGCACCATCCAAGGCCCTaGTGCACCCACACATGGAGGTCACCAGCTCAGCCC +
Preference number: 3 (lower is better)
Translates to: QAVQINWHHPRP*CTHTWRSPAQP
Trigger: GGGCTGAGCTGGTGACCTCCATGTGTGGGTGCAGCAGGGCCTTGGATGGTGCCAATTGATCTGGACAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR GCA 72 bp CGTGATTGGTGCTCAGGGCAGTGGTGTCAGGCTCAATaGGGAGGCATTCGGAAGTGGAGGGCTCTGCGACAG +
Preference number: 3 (lower is better)
Translates to: RDWCSGQWCQAQ*GGIRKWRALRQ
Trigger: CTGTCGCAGAGCCCTCCACTTCCGAATGCCTCCGCATTGAGCCTGACACCACTGCCCTGAGCACCAATCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR GCA 72 bp ACATGGAGGGAAGGCATGGTGTGCTTCCTGCAGAGATaGCTCTGGAGTCCCTGTGGCCACGGGATCTCACTG +
Preference number: 3 (lower is better)
Translates to: TWREGMVCFLQR*LWSPCGHGISL
Trigger: CAGTGAGATCCCGTGGCCACAGGGACTCCAGAGGCATCTCTGCAGGAAGCACACCATGCCTTCCCTCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR GCA 72 bp CCGGAGAAGGGGGTTTCATCAGCCGCACATCCTCACTaGCTTTCTCCACCCAGCGGTCTCTTGGTGTCGTGT +
Preference number: 3 (lower is better)
Translates to: PEKGVSSAAHPH*LSPPSGLLVSC
Trigger: ACACGACACCAAGAGACCGCTGGGTGGAGAAAGGCAGTGAGGATGTGCGGCTGATGAAACCCCCTTCTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR GCA 72 bp GGATCTGGACAAGCAGGTCGATGGTCTCGTGATTGGTaGTCAGGGCAGTGGTGTCAGGCTCAATGCGGAGGC +
Preference number: 3 (lower is better)
Translates to: GSGQAGRWSRDW*SGQWCQAQCGG
Trigger: GCCTCCGCATTGAGCCTGACACCACTGCCCTGAGCACCAATCACGAGACCATCGACCTGCTTGTCCAGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR CCA 72 bp GCAGGTCGATGGTCTCGTGATTGGTGCTCAGGGCAGTaGTGTCAGGCTCAATGCGGAGGCATTCGGAAGTGG +
Preference number: 3 (lower is better)
Translates to: AGRWSRDWCSGQ*CQAQCGGIRKW
Trigger: CCACTTCCGAATGCCTCCGCATTGAGCCTGACACCACTGCCCTGAGCACCAATCACGAGACCATCGACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR CAA 90 bp TCCAGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCGGCTGTCCAGATCAATaGGCACCATCCAAGGCCCTG +
Preference number: 3 (lower is better)
Translates to: SSGEKTSHSSVACIPHLCGCPDQ*APSKAL
Trigger: CAGGGCCTTGGATGGTGCCAATTGATCTGGACAGCC...GCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR GCA 72 bp TTTTGCAGGAGTGCCACGATGTTGGTCCTCAGCTTCTaGAGCTTCTCCTCCGTCTCGCGGAGCTTCCTCTCG +
Preference number: 3 (lower is better)
Translates to: FCRSATMLVLSF*SFSSVSRSFLS
Trigger: CGAGAGGAAGCTCCGCGAGACGGAGGAGAAGCTGCAGAAGCTGAGGACCAACATCGTGGCACTCCTGCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR CCA 72 bp GATTGTGGCGCCGTGATGGAACATGGAGGGAAGGCATaGTGTGCTTCCTGCAGAGATGCCTCTGGAGTCCCT +
Preference number: 3 (lower is better)
Translates to: DCGAVMEHGGKA*CASCRDASGVP
Trigger: AGGGACTCCAGAGGCATCTCTGCAGGAAGCACACCATGCCTTCCCTCCATGTTCCATCACGGCGCCACAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CCA 72 bp GGAGGATCTGGACAAGCAGGTCGATGGTCTCGTGATTaGTGCTCAGGGCAGTGGTGTCAGGCTCAATGCGGA +
Preference number: 3 (lower is better)
Translates to: GGSGQAGRWSRD*CSGQWCQAQCG
Trigger: TCCGCATTGAGCCTGACACCACTGCCCTGAGCACCAATCACGAGACCATCGACCTGCTTGTCCAGATCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR TCA 72 bp CCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATaGATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTG +
Preference number: 3 (lower is better)
Translates to: PCKSNQGATTNP*MKSPPPAATGL
Trigger: CAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
3UTR CCA 72 bp GGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAATaGCTCCGGCTTAGCAACCCAGTATGGCCAAAGTGG +
Preference number: 3 (lower is better)
Translates to: GLAVILRSQELK*LRLSNPVWPKW
Trigger: CCACTTTGGCCATACTGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CCA 72 bp GCTTCCCAGTCTTCTGCTGACCTCAGAGGAGCAGGGTaGCCATTGCTGATCTGGGTTAGGGAGATGCCAGAA +
Preference number: 3 (lower is better)
Translates to: ASQSSADLRGAG*PLLIWVREMPE
Trigger: TTCTGGCATCTCCCTAACCCAGATCAGCAATGGCCACCCTGCTCCTCTGAGGTCAGCAGAAGACTGGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CCA 72 bp CTTTCTCCACCCAGCGGTCTCTTGGTGTCGTGTCTGTaGGCACGTAGTCAAACTTCACCTTCCACCGCACCA +
Preference number: 3 (lower is better)
Translates to: LSPPSGLLVSCL*ARSQTSPSTAP
Trigger: TGGTGCGGTGGAAGGTGAAGTTTGACTACGTGCCCACAGACACGACACCAAGAGACCGCTGGGTGGAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR CCA 72 bp GTTAAGGGACACAGATTGTGGCGCCGTGATGGAACATaGAGGGAAGGCATGGTGTGCTTCCTGCAGAGATGC +
Preference number: 3 (lower is better)
Translates to: VKGHRLWRRDGT*REGMVCFLQRC
Trigger: GCATCTCTGCAGGAAGCACACCATGCCTTCCCTCCATGTTCCATCACGGCGCCACAATCTGTGTCCCTTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR GCA 72 bp CCTAAGGAGTCCTGTGGGGTTCCACACTCAGTGTGCTaGCCAAGTCAGAGATTTACCACAGATCTGTCTCCC +
Preference number: 3 (lower is better)
Translates to: PKESCGVPHSVC*PSQRFTTDLSP
Trigger: GGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCACACTGAGTGTGGAACCCCACAGGACTCCTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CCA 72 bp AGGTGGTTAGACAGGATCTTTTTCCCTCAAGCTGTTTaGACGCCACAGCCAGGACCAACTCTGACAGCTGCG +
Preference number: 3 (lower is better)
Translates to: RWLDRIFFPQAV*TPQPGPTLTAA
Trigger: CGCAGCTGTCAGAGTTGGTCCTGGCTGTGGCGTCCAAACAGCTTGAGGGAAAAAGATCCTGTCTAACCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CCA 72 bp GTAAACAATTCCGGAGGATCTGGACAAGCAGGTCGATaGTCTCGTGATTGGTGCTCAGGGCAGTGGTGTCAG +
Preference number: 3 (lower is better)
Translates to: VNNSGGSGQAGR*SRDWCSGQWCQ
Trigger: CTGACACCACTGCCCTGAGCACCAATCACGAGACCATCGACCTGCTTGTCCAGATCCTCCGGAATTGTTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR-3UTR CAA 90 bp TTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACTCCAAACAGGCCTCTCCACAAAGTCACAGTCCTaGTGCCTTCAGAAAACCCAG +
Preference number: 3 (lower is better)
Translates to: FQQKRPGSLSVLLQTGLSTKSQS*CLQKTQ
Trigger: CTGGGTTTTCTGAAGGCACAAGGACTGTGACTTTGT...GGAGAGGCCTGTTTGGAGTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR GCA 72 bp TTCCCTAAGGAGTCCTGTGGGGTTCCACACTCAGTGTaGTGCCCAAGTCAGAGATTTACCACAGATCTGTCT +
Preference number: 3 (lower is better)
Translates to: FPKESCGVPHSV*CPSQRFTTDLS
Trigger: AGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCACACTGAGTGTGGAACCCCACAGGACTCCTTAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CCA 72 bp TACTACTCCAAACAGGCCTCTCCTAGAGATGTAGTCTaGGAAGGTCCAAAACCCACCAGACAGGCACATCCA +
Preference number: 3 (lower is better)
Translates to: YYSKQASPRDVV*EGPKPTRQAHP
Trigger: TGGATGTGCCTGTCTGGTGGGTTTTGGACCTTCCCAGACTACATCTCTAGGAGAGGCCTGTTTGGAGTAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR TCA 72 bp GGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTaGTGTCTATGTCCTTTTGCAGGAGTGCCACGATGT +
Preference number: 3 (lower is better)
Translates to: GPQCRRPAHHLC*CLCPFAGVPRC
Trigger: ACATCGTGGCACTCCTGCAAAAGGACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
3UTR GCA 72 bp GAACCACAGGTTAGTGGTACAAAGTCACAGTCCTTGTaGCTTCAGAAAACCCAGAGGCCCCAAATACGAGTG +
Preference number: 3 (lower is better)
Translates to: EPQVSGTKSQSL*LQKTQRPQIRV
Trigger: CACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGACTGTGACTTTGTACCACTAACCTGTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CCA 72 bp TCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTaGACTCAAGTTACTGTGGTGAGAAACCTCACTGTC +
Preference number: 3 (lower is better)
Translates to: SEIYHRSVSPST*TQVTVVRNLTV
Trigger: GACAGTGAGGTTTCTCACCACAGTAACTTGAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp GCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGCGGGCCTCGGTCCCGTaGCCGCCTCCCCACGAAGAG +
Preference number: 4 (lower is better)
Translates to: ALPLELLQDGTGLAVILRRASVP*PPPHEE
Trigger: CTCTTCGTGGGGAGGCGGCCACGGGACCGAGGCCCG...CCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp GCGGAGCTTCCTCTCGGAGGTGCGCAGGCTTTCCTCGGAGGCCTTGGCCCGGGACAAATCTGCCCCGCTTaGACCTCTCCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AELPLGGAQAFLGGLGPGQICPA*TSPSSS
Trigger: AGAGGAGGAAGGAGAGGTGCAAGCGGGGCAGATTTG...TCCCGGGCCAAGGCCTCCGAGGAAAGCCTGCGCACCTCCGAGAGGAAGCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR TCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGGCGACCGAGGACGCTaGGGTCTACGCACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRGDRGR*GLRTGS
Trigger: GGAACCTGTGCGTAGACCTCAGCGTCCTCGGTCGCC...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTCCCCGCCACATGCCATaGCCCCTTCCAGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVPRHMP*PLPAVG
Trigger: GCCCACAGCTGGAAGGGGGCATGGCATGTGGCGGGG...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGGCCTCCTCCCGGGCTaGCAAAGCAGGGAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGGLLPG*QSRELW
Trigger: CCAAAGCTCCCTGCTTTGGCAGCCCGGGAGGAGGCC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGGCAGGCTTTCGGGGTaGCTCAGGTGGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRGRLSG*LRWLEQ
Trigger: CTGCTCCAGCCACCTGAGGCACCCCGAAAGCCTGCC...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp CGGAGAAGGGGGTTTCATCAGCCGCACATCCTCACTGCCTTTCTCCACCCAGCGGCTCTGCGACAGCTATaGCCTGCTGGGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: RRRGFHQPHILTAFLHPAALRQL*PAGPQG
Trigger: GCCCTGTGGCCCAGCAGGCCATAGCTGTCGCAGAGC...CGCTGGGTGGAGAAAGGCAGTGAGGATGTGCGGCTGATGAAACCCCCTTCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CCA 90 bp GCGGAGCTTCCTCTCGGAGGTGCGCAGGCTTTCCTCGGAGGCCTTGGCCCGGGACAATTCCGGAGGATCTaGACAAGCAGGTCGATGGTC +
Preference number: 4 (lower is better)
Translates to: AELPLGGAQAFLGGLGPGQFRRI*TSRSMV
Trigger: GACCATCGACCTGCTTGTCCAGATCCTCCGGAATTG...TCCCGGGCCAAGGCCTCCGAGGAAAGCCTGCGCACCTCCGAGAGGAAGCTCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR TCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTCCCTGGAGTCCCGCGTaGGGTCTCCACCTAGGCGTA +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVPWSPA*GLHLGV
Trigger: TACGCCTAGGTGGAGACCTCACGCGGGACTCCAGGG...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTCCACCTCCACGGCTGTaGCACGGCCCGTGTACCACT +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVPPPRL*HGPCTT
Trigger: AGTGGTACACGGGCCGTGTCACAGCCGTGGAGGTGG...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGCTTCCTCTCGGAGGTaGGCAGGCTTTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRASSRR*AGFPRR
Trigger: CCTCCGAGGAAAGCCTGCGCACCTCCGAGAGGAAGC...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR GCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGAAGTCCCCTCCCCCTaGAGCTACAGGGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYREVPSP*SYRVEG
Trigger: CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTC...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTACAGCTATGGCCTGCTaGGCCACAGGGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVTAMAC*ATGPTS
Trigger: GGAGGTGGGCCCTGTGGCCCAGCAGGCCATAGCTGT...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp GACAAGCAGGTCGATGGTCTCGTGATTGGTGCTCAGGGCAGTGGTGTCAGGCTCACAGCTATGGCCTGCTaGGCCACAGGGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: DKQVDGLVIGAQGSGVRLTAMAC*ATGPTS
Trigger: GGAGGTGGGCCCTGTGGCCCAGCAGGCCATAGCTGT...GAGCCTGACACCACTGCCCTGAGCACCAATCACGAGACCATCGACCTGCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGCTCTGCGACAGCTATaGCCTGCTGGGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVALRQL*PAGPQG
Trigger: GCCCTGTGGCCCAGCAGGCCATAGCTGTCGCAGAGC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGTTTCCTCGGAGGCCTTaGCCCGGGAGTCAGCACGGC +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEFPRRP*PGSQHG
Trigger: GCCGTGCTGACTCCCGGGCCAAGGCCTCCGAGGAAA...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR TCA 90 bp TTCCGGAGAAGGGGGTTTCATCAGCCGCACATCCTCACTGCCTTTCTCCACCCACCACCTCCACGGCTGTaGCACGGCCCGTGTACCACT +
Preference number: 4 (lower is better)
Translates to: FRRRGFHQPHILTAFLHPPPPRL*HGPCTT
Trigger: AGTGGTACACGGGCCGTGTCACAGCCGTGGAGGTGG...TGGGTGGAGAAAGGCAGTGAGGATGTGCGGCTGATGAAACCCCCTTCTCCGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR TCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGCCACCAACCCATGAATaGAGTCCCCTCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRPPTHE*SPLPLQ
Trigger: CTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGG...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR TCA 90 bp CCAAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACGGCGAGCGCACCACCTaGCCGGGCACTACCCGGATC +
Preference number: 4 (lower is better)
Translates to: PRLGQSSSRRGQGLSVYYGERTT*PGTTRI
Trigger: GATCCGGGTAGTGCCCGGTCAGGTGGTGCGCTCGCC...GTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTCCTCTTCAGGCACCTTaGTGGGGCTCAGTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVPLQAP*WGSVGP
Trigger: TGGCCCCACTGAGCCCCATCAAGGTGCCTGAAGAGG...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGCCGAGCTTTGCTCTCTaGCTCCCGCGCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGPSFAL*LPRLLF
Trigger: GAAGAGAAGGCGCGGGAGGCAGAGAGCAAAGCTCGG...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTCAGGTGCTCCCCCATTaGTCGGAGCAGGTGCCGGTA +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVQVLPH*SEQVPV
Trigger: TACCGGCACCTGCTCCGAGCAATGGGGGAGCACCTG...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGCAATACTGCGCCAGGTaGTCCCCCATTGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRQYCAR*SPIARS
Trigger: GCTCCGAGCAATGGGGGAGCACCTGGCGCAGTATTG...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp GCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGCAATACTGCGCCAGGTaGTCCCCCATTGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: ALPLELLQDGTGLAVILRQYCAR*SPIARS
Trigger: GCTCCGAGCAATGGGGGAGCACCTGGCGCAGTATTG...CCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp CGGAGAAGGGGGTTTCATCAGCCGCACATCCTCACTGCCTTTCTCCACCCAGCGTTCCACCGCACCACATaGTTGCCCACCTCCACGGCT +
Preference number: 4 (lower is better)
Translates to: RRRGFHQPHILTAFLHPAFHRTT*LPTSTA
Trigger: AGCCGTGGAGGTGGGCAAGCATGTGGTGCGGTGGAA...CGCTGGGTGGAGAAAGGCAGTGAGGATGTGCGGCTGATGAAACCCCCTTCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR GCA 90 bp CTCTTGGTGTCGTGTCTGTGGGCACGTAGTCAAACTTCACCTTCCACCGCACCAGCGACAGCTATGGCCTaGTGGGCCACAGGGCCCACC +
Preference number: 4 (lower is better)
Translates to: LLVSCLWARSQTSPSTAPATAMA*WATGPT
Trigger: GGTGGGCCCTGTGGCCCAGCAGGCCATAGCTGTCGC...TGGTGCGGTGGAAGGTGAAGTTTGACTACGTGCCCACAGACACGACACCAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGGAAGTGGAGGGCTCTaGGACAGCTATGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGGSGGL*DSYGLL
Trigger: CAGCAGGCCATAGCTGTCGCAGAGCCCTCCACTTCC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
ENST00000675570.1
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAAGTCCCCTCCCCCTaGAGCTACAGGGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVEVPSP*SYRVEG
Trigger: CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR GCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGAAGTCCCCTCCCCCTaGAGCTACAGGGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEEVPSP*SYRVEG
Trigger: CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTC...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGACGCAGCTCACTGGATaGGGGCTGGTTCCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRTQLTG*GLVPVG
Trigger: GCCAACTGGAACCAGCCCCCATCCAGTGAGCTGCGT...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGTCGGGGTGCCTCAGGTaGCTGGAGCAGCCTAGATGT +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGSGCLR*LEQPRC
Trigger: ACATCTAGGCTGCTCCAGCCACCTGAGGCACCCCGA...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGCTCCGCACGGGTCTTaGAACGGCTTGACGTGTACT +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGAPHGS*NGLTCT
Trigger: AGTACACGTCAAGCCGTTTCAAGACCCGTGCGGAGC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp TTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACTCCAAACAGGCCTCTCCGGCGACCGAGGACGCTaGGGTCTACGCACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: FQQKRPGSLSVLLQTGLSGDRGR*GLRTGS
Trigger: GGAACCTGTGCGTAGACCTCAGCGTCCTCGGTCGCC...GGAGAGGCCTGTTTGGAGTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGTCGGGATGCAGTCTTaGCGAGAGTGTTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGVGMQS*RECWQA
Trigger: AGCCTGCCAACACTCTCGTCAAGACTGCATCCCGAC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGCGACCACCAACCCATaGATGAAGTCCCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEATTNP*MKSPPP
Trigger: AGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGC...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR TCA 90 bp GGTCGATGGTCTCGTGATTGGTGCTCAGGGCAGTGGTGTCAGGCTCAATGCGGAGCGACCACCAACCCATaGATGAAGTCCCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GRWSRDWCSGQWCQAQCGATTNP*MKSPPP
Trigger: AGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGC...TCCGCATTGAGCCTGACACCACTGCCCTGAGCACCAATCACGAGACCATCGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGCTAATGTCCGAGCTTTaGTCTCTGCCTCCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGLMSEL*SLPPAP
Trigger: AGGCGCGGGAGGCAGAGAGCAAAGCTCGGACATTAG...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTTTCCACCGCACCACATaGTTGCCCACCTCCACGGCT +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVFHRTT*LPTSTA
Trigger: AGCCGTGGAGGTGGGCAAGCATGTGGTGCGGTGGAA...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGCCGCACATCCTCACTaGCTTTCTCCACCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVAAHPH*LSPPSG
Trigger: ACCGCTGGGTGGAGAAAGGCAGTGAGGATGTGCGGC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp GACAAGCAGGTCGATGGTCTCGTGATTGGTGCTCAGGGCAGTGGTGTCAGGCTCGCCGCACATCCTCACTaGCTTTCTCCACCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: DKQVDGLVIGAQGSGVRLAAHPH*LSPPSG
Trigger: ACCGCTGGGTGGAGAAAGGCAGTGAGGATGTGCGGC...GAGCCTGACACCACTGCCCTGAGCACCAATCACGAGACCATCGACCTGCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR GCA 90 bp AGCCAGGAGCTGAAATGGCTCCGGCTTAGCAACCCAGTATGGCCAAAGTGGAAAGCGACAGCTATGGCCTaGTGGGCCACAGGGCCCACC +
Preference number: 4 (lower is better)
Translates to: SQELKWLRLSNPVWPKWKATAMA*WATGPT
Trigger: GGTGGGCCCTGTGGCCCAGCAGGCCATAGCTGTCGC...TTTCCACTTTGGCCATACTGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGAAGTGGAGGGCTCTaGGACAGCTATGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEGSGGL*DSYGLL
Trigger: CAGCAGGCCATAGCTGTCGCAGAGCCCTCCACTTCC...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR GCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGCACCATCCAAGGCCCTaGTGCACCCACACATGGAGG +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEHHPRP*CTHTWR
Trigger: CCTCCATGTGTGGGTGCAGCAGGGCCTTGGATGGTG...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp GCGGAGCTTCCTCTCGGAGGTGCGCAGGCTTTCCTCGGAGGCCTTGGCCCGGGATGTCTGAGAGCCTTCTaGTACCTTTACGAACAAGAC +
Preference number: 4 (lower is better)
Translates to: AELPLGGAQAFLGGLGPGCLRAF*YLYEQD
Trigger: GTCTTGTTCGTAAAGGTAGCAGAAGGCTCTCAGACA...TCCCGGGCCAAGGCCTCCGAGGAAAGCCTGCGCACCTCCGAGAGGAAGCTCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CCA 90 bp GTTAAGGGACACAGATTGTGGCGCCGTGATGGAACATGGAGGGAAGGCATGGTGGAACGAGCGCCGCTCTaGCTTCGTGCCCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VKGHRLWRRDGTWREGMVERAPL*LRALWG
Trigger: TCCCCAGAGGGCACGAAGCCAGAGCGGCGCTCGTTC...CACCATGCCTTCCCTCCATGTTCCATCACGGCGCCACAATCTGTGTCCCTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AGGAGAAAAGTCAGCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCACGCAGCTCACTGGATaGGGGCTGGTTCCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: RRKVSPAPGASPRWHWTRTQLTG*GLVPVG
Trigger: GCCAACTGGAACCAGCCCCCATCCAGTGAGCTGCGT...GCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGCTGACTTTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGGAGCCTTTCGGGGCTaGCTGGCTGGTCTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVGAFRG*LAGLGV
Trigger: AACTCCTAGACCAGCCAGCCAGCCCCGAAAGGCTCC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGGTGCCTCAGGTGGCTaGAGCAGCCTAGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVGASGG*SSLDVL
Trigger: CAGCACATCTAGGCTGCTCCAGCCACCTGAGGCACC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTCACCCAGCGGTCTCTTaGTGTCGTGTCTGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVHPAVS*CRVCGH
Trigger: GTGCCCACAGACACGACACCAAGAGACCGCTGGGTG...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp CTCCTCCTCCCCGCCCTCCTGTTGTGTATCAAGGCTCTGATGTTCCGGAGAAGGCACCCAGCGGTCTCTTaGTGTCGTGTCTGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LLLPALLLCIKALMFRRRHPAVS*CRVCGH
Trigger: GTGCCCACAGACACGACACCAAGAGACCGCTGGGTG...CCTTCTCCGGAACATCAGAGCCTTGATACACAACAGGAGGGCGGGGAGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGGAGGCATTCGGAAGTaGAGGGCTCTGCGACAGCTA +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGGGIRK*RALRQL
Trigger: TAGCTGTCGCAGAGCCCTCCACTTCCGAATGCCTCC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
ENST00000675570.1
CDS-3UTR CCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGAGAGCCCCTCCAATGTaGAACCTCCTACACAGCCCC +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRRAPPM*NLLHSP
Trigger: GGGGCTGTGTAGGAGGTTCCACATTGGAGGGGCTCT...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp GCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGCCGTACTGCCCAATCTaGGTAGACTCAGGTGTTCGC +
Preference number: 4 (lower is better)
Translates to: ALPLELLQDGTGLAVILRPYCPI*VDSGVR
Trigger: GCGAACACCTGAGTCTACTCAGATTGGGCAGTACGG...CCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGTCTCTACATTGTCTGTaGCAGGTTCCCGGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRSLHCL*QVPGSE
Trigger: CTCGGACCCGGGAACCTGTCACAGACAATGTAGAGA...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGCCTTGTGCCCATGGATaGAGATCCTCATCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGPCAHG*RSSSGD
Trigger: ATCCCCGGATGAGGATCTTCATCCATGGGCACAAGG...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGATGGGTGTGGTTTTCTaGAGGGCCTCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGMGVVF*RASSFS
Trigger: GGAGAAGCTGGAGGCCCTTCAGAAAACCACACCCAT...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp AGGAGAAAAGTCAGCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCAGCCAGGACCAACTCTaGCAGCTGCGAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: RRKVSPAPGASPRWHWTRSQDQL*QLRERE
Trigger: CTCTCTCTCTCGCAGCTGTCAGAGTTGGTCCTGGCT...GCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGCTGACTTTTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGAGAGCCTCTTGGTCTaGACCTTGTGCCCATGGATG +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGESLLV*TLCPWM
Trigger: CATCCATGGGCACAAGGTGCAGACCAAGAGGCTCTC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCGGCAGGCTTTCGGGGTaGCTCAGGTGGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLGRLSG*LRWLEQ
Trigger: CTGCTCCAGCCACCTGAGGCACCCCGAAAGCCTGCC...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGCAAATCTGCCCCGCTTaGACCTCTCCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGQICPA*TSPSSS
Trigger: AGAGGAGGAAGGAGAGGTGCAAGCGGGGCAGATTTG...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000675570.1
CDS-3UTR GCA 90 bp GTCTGTGGGCACGTAGTCAAACTTCACCTTCCACCGCACCACATGCTTGCCCACGGAAGTGGAGGGCTCTaGGACAGCTATGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VCGHVVKLHLPPHHMLAHGSGGL*DSYGLL
Trigger: CAGCAGGCCATAGCTGTCGCAGAGCCCTCCACTTCC...GTGGGCAAGCATGTGGTGCGGTGGAAGGTGAAGTTTGACTACGTGCCCACAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGTGGTGTCAGGCTCAATaGGGAGGCATTCGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGWCQAQ*GGIRKW
Trigger: CCACTTCCGAATGCCTCCGCATTGAGCCTGACACCA...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
ENST00000675570.1
ENST00000675779.1
CDS-3UTR GCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGTGGTCTCGTGATTGGTaGTCAGGGCAGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRWSRDW*SGQWCQ
Trigger: CTGACACCACTGCCCTGAGCACCAATCACGAGACCA...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGTGGTCTCGTGATTGGTaGTCAGGGCAGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGWSRDW*SGQWCQ
Trigger: CTGACACCACTGCCCTGAGCACCAATCACGAGACCA...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
ENST00000675570.1
ENST00000675779.1
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGTTGGTCCTCAGCTTCTaGAGCTTCTCCTCCGTCTCG +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGLVLSF*SFSSVS
Trigger: CGAGACGGAGGAGAAGCTGCAGAAGCTGAGGACCAA...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
ENST00000675570.1
ENST00000675779.1
CDS-3UTR GCA 90 bp ATGTTCCGGAGAAGGGGGTTTCATCAGCCGCACATCCTCACTGCCTTTCTCCACGAAGTCCCCTCCCCCTaGAGCTACAGGGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: MFRRRGFHQPHILTAFLHEVPSP*SYRVEG
Trigger: CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTC...GTGGAGAAAGGCAGTGAGGATGTGCGGCTGATGAAACCCCCTTCTCCGGAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR GCA 90 bp GCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGGCATGGTGTGCTTCCTaGAGAGATGCCTCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: ALPLELLQDGTGLAVILRAWCAS*RDASGV
Trigger: GACTCCAGAGGCATCTCTGCAGGAAGCACACCATGC...CCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TCCAGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCCACCCAGCGGTCTCTTaGTGTCGTGTCTGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SSGEKTSHSSVACIPHLCHPAVS*CRVCGH
Trigger: GTGCCCACAGACACGACACCAAGAGACCGCTGGGTG...GCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGGAGGCATTCGGAAGTaGAGGGCTCTGCGACAGCTA +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVGGIRK*RALRQL
Trigger: TAGCTGTCGCAGAGCCCTCCACTTCCGAATGCCTCC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGCGATGGTCTCGTGATTaGTGCTCAGGGCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRRWSRD*CSGQWC
Trigger: ACACCACTGCCCTGAGCACCAATCACGAGACCATCG...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGCGATGGTCTCGTGATTaGTGCTCAGGGCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGRWSRD*CSGQWC
Trigger: ACACCACTGCCCTGAGCACCAATCACGAGACCATCG...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
ENST00000675570.1
ENST00000675779.1
CDS-3UTR CCA 90 bp CAGCCGCACATCCTCACTGCCTTTCTCCACCCAGCGGTCTCTTGGTGTCGTGTCGGAGTGCCACGATGTTaGTCCTCAGCTTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QPHILTAFLHPAVSWCRVGVPRC*SSASAA
Trigger: AGCTGCAGAAGCTGAGGACCAACATCGTGGCACTCC...GACACGACACCAAGAGACCGCTGGGTGGAGAAAGGCAGTGAGGATGTGCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGGAGTGCCACGATGTTaGTCCTCAGCTTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGGVPRC*SSASAA
Trigger: AGCTGCAGAAGCTGAGGACCAACATCGTGGCACTCC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
ENST00000675570.1
ENST00000675779.1
CDS-3UTR CCA 90 bp TCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGCCGGATCGAGGGCAGTaGCGAGCGCACCACCTGACC +
Preference number: 4 (lower is better)
Translates to: SLCLQKTQRPQIRVGRELPDRGQ*RAHHLT
Trigger: GGTCAGGTGGTGCGCTCGCCACTGCCCTCGATCCGG...CAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAACTTGATGGGGCTCAGTaGGGCCAGGCCGAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LLQDGTGLAVILRSQELKLDGAQ*GQAEGW
Trigger: CCACCCTTCGGCCTGGCCCCACTGAGCCCCATCAAG...TTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGCCTTGTGCCCATGGATaGAGATCCTCATCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEPCAHG*RSSSGD
Trigger: ATCCCCGGATGAGGATCTTCATCCATGGGCACAAGG...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp AGGAGAAAAGTCAGCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCATGGGTGTGGTTTTCTaGAGGGCCTCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RRKVSPAPGASPRWHWTRMGVVF*RASSFS
Trigger: GGAGAAGCTGGAGGCCCTTCAGAAAACCACACCCAT...GCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGCTGACTTTTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp TCCAGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCGTCGGGATGCAGTCTTaGCGAGAGTGTTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SSGEKTSHSSVACIPHLCVGMQS*RECWQA
Trigger: AGCCTGCCAACACTCTCGTCAAGACTGCATCCCGAC...GCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp TTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGGACCACCTCCACGGCTGTaGCACGGCCCGTGTACCACT +
Preference number: 4 (lower is better)
Translates to: LCLQKTQRPQIRVGRELGPPPRL*HGPCTT
Trigger: AGTGGTACACGGGCCGTGTCACAGCCGTGGAGGTGG...TCCCAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp AGTGGGGCCAGGCCGAAGGGTGGAAGTAGAAAAGCATCAACAGGCTGTCCAGATCCACCAACCCATGAATaGAGTCCCCTCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SGARPKGGSRKASTGCPDPPTHE*SPLPLQ
Trigger: CTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGG...ATCTGGACAGCCTGTTGATGCTTTTCTACTTCCACCCTTCGGCCTGGCCCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp TCCAGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCCAGGGTGGCCATTGCTaGTCTGGGTTAGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: SSGEKTSHSSVACIPHLCQGGHC*SGLGRC
Trigger: GCATCTCCCTAACCCAGATCAGCAATGGCCACCCTG...GCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp AGGAGAAAAGTCAGCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCCCATGCTGCCTGAGATaGAGAGAGAGAGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: RRKVSPAPGASPRWHWTRPCCLR*RERAGW
Trigger: CCATCCTGCTCTCTCTCTTCATCTCAGGCAGCATGG...GCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGCTGACTTTTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp CCTCCTCCCCGCCCTCCTGTTGTGTATCAAGGCTCTGATGTTCCGGAGAAGGGGTTCCCCAGCACTGTCTaGGAGCCTTCTGCTACCTTT +
Preference number: 4 (lower is better)
Translates to: PPPRPPVVYQGSDVPEKGFPSTV*EPSATF
Trigger: AAAGGTAGCAGAAGGCTCTCAGACAGTGCTGGGGAA...CCCCTTCTCCGGAACATCAGAGCCTTGATACACAACAGGAGGGCGGGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGCTTTCTTCACCTCCTaGTCCGCACGGGTCTTGAAA +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGAFFTS*SARVLK
Trigger: TTTCAAGACCCGTGCGGAGCAGGAGGTGAAGAAAGC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp CAGCCGCACATCCTCACTGCCTTTCTCCACCCAGCGGTCTCTTGGTGTCGTGTCCCTTCACAACAAATCTaGCCCGCTTGCACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: QPHILTAFLHPAVSWCRVPSQQI*PACTSP
Trigger: AGGAGAGGTGCAAGCGGGGCAGATTTGTTGTGAAGG...GACACGACACCAAGAGACCGCTGGGTGGAGAAAGGCAGTGAGGATGTGCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR GCA 90 bp GTTAAGGGACACAGATTGTGGCGCCGTGATGGAACATGGAGGGAAGGCATGGTGGCCGCACATCCTCACTaGCTTTCTCCACCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: VKGHRLWRRDGTWREGMVAAHPH*LSPPSG
Trigger: ACCGCTGGGTGGAGAAAGGCAGTGAGGATGTGCGGC...CACCATGCCTTCCCTCCATGTTCCATCACGGCGCCACAATCTGTGTCCCTTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp AGTGGGGCCAGGCCGAAGGGTGGAAGTAGAAAAGCATCAACAGGCTGTCCAGATGGAAGTGGAGGGCTCTaGGACAGCTATGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SGARPKGGSRKASTGCPDGSGGL*DSYGLL
Trigger: CAGCAGGCCATAGCTGTCGCAGAGCCCTCCACTTCC...ATCTGGACAGCCTGTTGATGCTTTTCTACTTCCACCCTTCGGCCTGGCCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTAGGGAAGGCATGGTGTaGTTCCTGCAGAGATGCCTC +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVREGMV*FLQRCL
Trigger: GAGGCATCTCTGCAGGAAGCACACCATGCCTTCCCT...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTCATTCCAGTGTGGCCTaGATCCCTCACCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVHSSVA*IPHLCF
Trigger: GAAGCAGAGGTGAGGGATGCAGGCCACACTGGAATG...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGTCCTTTTGCAGGAGTaGCACGATGTTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGVLLQE*HDVGPQ
Trigger: CTGAGGACCAACATCGTGGCACTCCTGCAAAAGGAC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000445980.5
ENST00000675570.1
CDS-3UTR CCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGCCGACTTCCCAAACTaGATCACACTGGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRADFPN*ITLAAS
Trigger: TGATGCTGCCAGTGTGATCCAGTTTGGGAAGTCGGC...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp GCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGTCCGAGCATTCCAGGTaGGCAGTGGGACTATCACTT +
Preference number: 4 (lower is better)
Translates to: ALPLELLQDGTGLAVILRSEHSR*AVGLSL
Trigger: AAGTGATAGTCCCACTGCCCACCTGGAATGCTCGGA...CCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGTGTAACGCAGCTCACTaGATGGGGGCTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVECNAAH*MGAGSS
Trigger: ACTGGAACCAGCCCCCATCCAGTGAGCTGCGTTACA...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGTCCACAGAACTCAGCTaGAAGGGGAGGGTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGSTELS*KGRVLH
Trigger: ATGGAGAACCCTCCCCTTCCAGCTGAGTTCTGTGGA...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGCTGCTTGGGAGCGGATaGGTGTGGTTTTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVELLGSG*VWFSEG
Trigger: CCCTTCAGAAAACCACACCCATCCGCTCCCAAGCAG...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGCCTCAGTGGAAGGTCTaGTGGTCACTTCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEPQWKV*WSLPRA
Trigger: TGCCCTTGGAAGTGACCACCAGACCTTCCACTGAGG...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGCACAGGTTCCTCAGTaGAAGGTCTGGTGGTCACTT +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGAQVPQ*KVWWSL
Trigger: AAGTGACCACCAGACCTTCCACTGAGGAACCTGTGC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGCAAAGCAGGGAGCTTTaGGGTACTGCTGATGACAGG +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRQSREL*GTADDR
Trigger: CCTGTCATCAGCAGTACCCCAAAGCTCCCTGCTTTG...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AGTGGGGCCAGGCCGAAGGGTGGAAGTAGAAAAGCATCAACAGGCTGTCCAGATGGTGCCTCAGGTGGCTaGAGCAGCCTAGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: SGARPKGGSRKASTGCPDGASGG*SSLDVL
Trigger: CAGCACATCTAGGCTGCTCCAGCCACCTGAGGCACC...ATCTGGACAGCCTGTTGATGCTTTTCTACTTCCACCCTTCGGCCTGGCCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGCCTCCCGAGGGCTCTTaGAGTTGGGCAGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEPPEGS*SWAVKM
Trigger: CATCTTTACTGCCCAACTCCAAGAGCCCTCGGGAGG...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AAAAGCATCAACAGGCTGTCCAGATCAATTGGCACCATCCAAGGCCCTGCTGCAGCTCTGCGACAGCTATaGCCTGCTGGGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: KSINRLSRSIGTIQGPAAALRQL*PAGPQG
Trigger: GCCCTGTGGCCCAGCAGGCCATAGCTGTCGCAGAGC...TGCAGCAGGGCCTTGGATGGTGCCAATTGATCTGGACAGCCTGTTGATGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGGACAAGCAGGTCGATaGTCTCGTGATTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRGQAGR*SRDWCS
Trigger: TGAGCACCAATCACGAGACCATCGACCTGCTTGTCC...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGGACAAGCAGGTCGATaGTCTCGTGATTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGGQAGR*SRDWCS
Trigger: TGAGCACCAATCACGAGACCATCGACCTGCTTGTCC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
ENST00000675570.1
ENST00000675779.1
CDS-3UTR CCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGCAATTCCGGAGGATCTaGACAAGCAGGTCGATGGTC +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRQFRRI*TSRSMV
Trigger: GACCATCGACCTGCTTGTCCAGATCCTCCGGAATTG...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp ACATGCTTGCCCACCTCCACGGCTGTGACACGGCCCGTGTACCACTCCCTGTTCCACTCAGCTGCTTCTTaGAGATGGGGAAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: TCLPTSTAVTRPVYHSLFHSAAS*RWGNLE
Trigger: CTCCAAGTTTCCCCATCTCCAAGAAGCAGCTGAGTG...GAACAGGGAGTGGTACACGGGCCGTGTCACAGCCGTGGAGGTGGGCAAGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CCA 90 bp CTTGCCTTTGTCTTTGACCCTGAGAAGTTAAGGGACACAGATTGTGGCGCCGTGTTTCCTCGGAGGCCTTaGCCCGGGAGTCAGCACGGC +
Preference number: 4 (lower is better)
Translates to: LAFVFDPEKLRDTDCGAVFPRRP*PGSQHG
Trigger: GCCGTGCTGACTCCCGGGCCAAGGCCTCCGAGGAAA...CACGGCGCCACAATCTGTGTCCCTTAACTTCTCAGGGTCAAAGACAAAGGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGGAGTGCCACGATGTTaGTCCTCAGCTTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVGVPRC*SSASAA
Trigger: AGCTGCAGAAGCTGAGGACCAACATCGTGGCACTCC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp GCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGGTCTCCCCCTCAACCTaGACTCAAGTTACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: ALPLELLQDGTGLAVILRVSPST*TQVTVV
Trigger: CACCACAGTAACTTGAGTCCAGGTTGAGGGGGAGAC...CCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGCATGGAGGGAAGGCATaGTGTGCTTCCTGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGHGGKA*CASCRD
Trigger: ATCTCTGCAGGAAGCACACCATGCCTTCCCTCCATG...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AGGAGAAAAGTCAGCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCCTCAGAGGAGCAGGGTaGCCATTGCTGATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RRKVSPAPGASPRWHWTRLRGAG*PLLIWV
Trigger: AACCCAGATCAGCAATGGCCACCCTGCTCCTCTGAG...GCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGCTGACTTTTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGATGCCTTCTTCCTCATaGAACGTGCGAGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGMPSSS*NVRDRK
Trigger: CTTCCTGTCTCGCACGTTTCATGAGGAAGAAGGCAT...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp ATCCTCACTGCCTTTCTCCACCCAGCGGTCTCTTGGTGTCGTGTCTGTGGGCACCTTTCTGAGCTCTCTTaGGGTCAGCCGAGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ILTAFLHPAVSWCRVCGHLSELS*GQPSPL
Trigger: AAGAGGACTCGGCTGACCTCAAGAGAGCTCAGAAAG...GTGCCCACAGACACGACACCAAGAGACCGCTGGGTGGAGAAAGGCAGTGAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR TCA 90 bp AGTGGGGCCAGGCCGAAGGGTGGAAGTAGAAAAGCATCAACAGGCTGTCCAGATAGGTCGATGGTCTCGTaGTTGGTGCTCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SGARPKGGSRKASTGCPDRSMVS*LVLRAV
Trigger: CACTGCCCTGAGCACCAATCACGAGACCATCGACCT...ATCTGGACAGCCTGTTGATGCTTTTCTACTTCCACCCTTCGGCCTGGCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp GTCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTTTGGGTCCCTGGATATaGGCCCCCAGCAGGACCACC +
Preference number: 4 (lower is better)
Translates to: VLVPSENPEAPNTSGKRVLGPWI*APSRTT
Trigger: GGTGGTCCTGCTGGGGGCTCATATCCAGGGACCCAA...AACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTCTTCCTCATGAAACGTaGGAGACAGGAAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVLPHET*ETGRGR
Trigger: CCTGCCTCTTCCTGTCTCGCACGTTTCATGAGGAAG...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTCTCTGGGGACGTCTCTaGCATCTGGATATCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVLWGRL*HLDISW
Trigger: CCAAGAGATATCCAGATGGCAGAGACGTCCCCAGAG...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGTCTTTAAGTGCTCGCTaGTTGGCCTCCTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGSLSAR*LASLIL
Trigger: GAGGATCAAGGAGGCCAAGCAGCGAGCACTTAAAGA...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATCCCCGCCACATGCCATaGCCCCTTCCAGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHPRHMP*PLPAVG
Trigger: GCCCACAGCTGGAAGGGGGCATGGCATGTGGCGGGG...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGCCCAGGGGAACCTTCTaGTTTTGTTCAGAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRPRGTF*FCSEAS
Trigger: TGAGGCTTCTGAACAAAAGCAGAAGGTTCCCCTGGG...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGCCTCCAGCTTCTCCTaGTGCTGGCGAATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVASSFS*CWRIFS
Trigger: AGAGAAAATTCGCCAGCAGCAGGAGAAGCTGGAGGC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGCAATTTCTTCAGGTCTaGTTGGGAGCGGATGGGTGT +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGQFLQV*LGADGC
Trigger: ACACCCATCCGCTCCCAAGCAGACCTGAAGAAATTG...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp TCCAGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCTGGTGTCAGGCTCAATaGGGAGGCATTCGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SSGEKTSHSSVACIPHLCWCQAQ*GGIRKW
Trigger: CCACTTCCGAATGCCTCCGCATTGAGCCTGACACCA...GCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp CGGAGAAGGGGGTTTCATCAGCCGCACATCCTCACTGCCTTTCTCCACCCAGCGGGCTCTGGTAGGAATTaGACAGGTTTTGGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: RRRGFHQPHILTAFLHPAGSGRN*TGFGAL
Trigger: TAGGGCTCCAAAACCTGTGCAATTCCTACCAGAGCC...CGCTGGGTGGAGAAAGGCAGTGAGGATGTGCGGCTGATGAAACCCCCTTCTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR GCA 90 bp GTCTATGTCCTTTTGCAGGAGTGCCACGATGTTGGTCCTCAGCTTCTGCAGCTTGCTTCCTCTCGGAGGTaGGCAGGCTTTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VYVLLQECHDVGPQLLQLASSRR*AGFPRR
Trigger: CCTCCGAGGAAAGCCTGCGCACCTCCGAGAGGAAGC...AAGCTGCAGAAGCTGAGGACCAACATCGTGGCACTCCTGCAAAAGGACATAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGATGTCTATGTCCTCCTaGACCTTTTGCAGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGMSMSS*TFCRSA
Trigger: GGCACTCCTGCAAAAGGTGCAGGAGGACATAGACAT...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTTGCACCTTGTGCCCATaGATGAAGATCCTCATCCGG +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVCTLCP*MKILIR
Trigger: CCGGATGAGGATCTTCATCCATGGGCACAAGGTGCA...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGTGATGGCTCTGTTCTaGACCTGTCGCAACATCACC +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVVMALF*TCRNIT
Trigger: GGTGATGTTGCGACAGGTCCAGAACAGAGCCATCAC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGAGACACAAATCGCACTaGATGGTGGTGGGGATTTCC +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRRHKSH*MVVGIS
Trigger: GGAAATCCCCACCACCATCCAGTGCGATTTGTGTCT...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGTCCACAGAACTCAGCTaGAAGGGGAGGGTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVESTELS*KGRVLH
Trigger: ATGGAGAACCCTCCCCTTCCAGCTGAGTTCTGTGGA...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTCAGGATCAGGGTTCATaGAGCAAACCCAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVQDQGS*SKPRCQ
Trigger: CTGACACCTGGGTTTGCTCCATGAACCCTGATCCTG...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCTTCTCGGGGCTGGCTGGCTaGTCTAGGAGTTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SGEKTSHSSVACIPHLCFSGLAG*SRSWQR
Trigger: TCTTTGCCAACTCCTAGACCAGCCAGCCAGCCCCGA...GAAGCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAAGGAGCCTTTCGGGGCTaGCTGGCTGGTCTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LLQDGTGLAVILRSQELKGAFRG*LAGLGV
Trigger: AACTCCTAGACCAGCCAGCCAGCCCCGAAAGGCTCC...TTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp GAGGAATCACCAGCTCAAGAAACCCCAAGACTTGGACAGTCTTCCAGCAGAAGAACAGCTATGGCCTGCTaGGCCACAGGGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: EESPAQETPRLGQSSSRRTAMAC*ATGPTS
Trigger: GGAGGTGGGCCCTGTGGCCCAGCAGGCCATAGCTGT...TCTTCTGCTGGAAGACTGTCCAAGTCTTGGGGTTTCTTGAGCTGGTGATTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGGACAAGCAGGTCGATaGTCTCGTGATTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVGQAGR*SRDWCS
Trigger: TGAGCACCAATCACGAGACCATCGACCTGCTTGTCC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp TGGGGAAACTTGGAGGCAGGAAGTACCGTAAACAATTCCGGAGGATCTGGACAATTTCCTCGGAGGCCTTaGCCCGGGAGTCAGCACGGC +
Preference number: 4 (lower is better)
Translates to: WGNLEAGSTVNNSGGSGQFPRRP*PGSQHG
Trigger: GCCGTGCTGACTCCCGGGCCAAGGCCTCCGAGGAAA...TTGTCCAGATCCTCCGGAATTGTTTACGGTACTTCCTGCCTCCAAGTTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CCA 90 bp TTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGGAGCCACGGGATCTCACTaGCCCCCTCTTCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: LCLQKTQRPQIRVGRELGATGSH*PPLQAP
Trigger: AGGTGCCTGAAGAGGGGGCCAGTGAGATCCCGTGGC...TCCCAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AAAAGCATCAACAGGCTGTCCAGATCAATTGGCACCATCCAAGGCCCTGCTGCACTGCAGAGATGCCTCTaGAGTCCCTGTGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: KSINRLSRSIGTIQGPAALQRCL*SPCGHG
Trigger: CCCGTGGCCACAGGGACTCCAGAGGCATCTCTGCAG...TGCAGCAGGGCCTTGGATGGTGCCAATTGATCTGGACAGCCTGTTGATGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CAA 72 bp GAGCTTCTCCAAGATGGCACTGGACTCGCCGTTATCTaGAGGAGCCAGGAGCTGAAATGGCTCCGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: ELLQDGTGLAVI*RSQELKWLRLS
Trigger: GCTAAGCCGGAGCCATTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGCTCAAGATATCCAGTaGCACATTTCACTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGAQDIQ*HISLQW
Trigger: CCACTGGAGTGAAATGTGTCACTGGATATCTTGAGC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS-3UTR TCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGGTCTTGAAACGGCTTaGCGTGTACTTGTACATCCT +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRGLETA*RVLVHP
Trigger: AGGATGTACAAGTACACGTCAAGCCGTTTCAAGACC...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp GGCCCGTGTACCACTCCCTGTTCACACGCACCTCCACGTGCAGCCCTTTATCTTAGCCCTTTATCTTTCTaGGCTCTCTTGAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GPCTTPCSHAPPRAALYLSPLSF*ALLRSA
Trigger: GGCTGACCTCAAGAGAGCTCAGAAAGATAAAGGGCT...AAGATAAAGGGCTGCACGTGGAGGTGCGTGTGAACAGGGAGTGGTACACGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR TCA 90 bp GTCTATGTCCTTTTGCAGGAGTGCCACGATGTTGGTCCTCAGCTTCTGCAGCTTCCACCAACCCATGAATaGAGTCCCCTCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VYVLLQECHDVGPQLLQLPPTHE*SPLPLQ
Trigger: CTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGG...AAGCTGCAGAAGCTGAGGACCAACATCGTGGCACTCCTGCAAAAGGACATAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR TCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGTCAATTCAGACAATCTaGGTCTCGTGTGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGSIQTI*VSCGWS
Trigger: GGACCATCCACACGAGACTCAGATTGTCTGAATTGA...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTTTGGTCTGCACCTTGTaGCCATGGATGAAGATCCTC +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVLVCTL*PWMKIL
Trigger: GAGGATCTTCATCCATGGGCACAAGGTGCAGACCAA...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGCAATCCTTGCTACGTaGTCTGCTTTCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVAILAT*SAFFTS
Trigger: GGAGGTGAAGAAAGCAGAGCACGTAGCAAGGATTGC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp GTCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTCCGAGCTTTGCTCTCTaGCTCCCGCGCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VLVPSENPEAPNTSGKRVPSFAL*LPRLLF
Trigger: GAAGAGAAGGCGCGGGAGGCAGAGAGCAAAGCTCGG...AACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp CTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAACTAATGTCCGAGCTTTaGTCTCTGCCTCCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: LLQDGTGLAVILRSQELKLMSEL*SLPPAP
Trigger: AGGCGCGGGAGGCAGAGAGCAAAGCTCGGACATTAG...TTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTATATCCTTCCAATACTaGGCCAGGTGCTCCCCCATT +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVISFQY*ARCSPI
Trigger: AATGGGGGAGCACCTGGCGCAGTATTGGAAGGATAT...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTTTCCTCATCAGAAACTaGGACACTCCGCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVFLIRN*DTPLPT
Trigger: AGTCGGAAGCGGAGTGTCGCAGTTTCTGATGAGGAA...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGAGAAAAGTCAGCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCTTCCTCATCAGAAACTaGGACACTCCGCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: RRKVSPAPGASPRWHWTRFLIRN*DTPLPT
Trigger: AGTCGGAAGCGGAGTGTCGCAGTTTCTGATGAGGAA...GCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGCTGACTTTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGCGACAGCTATGGCCTaGTGGGCCACAGGGCCCACC +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPATAMA*WATGPT
Trigger: GGTGGGCCCTGTGGCCCAGCAGGCCATAGCTGTCGC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR GCA 90 bp TTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACTCCAAACAGGCCTCTCCTGGTCTCGTGATTGGTaGTCAGGGCAGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: FQQKRPGSLSVLLQTGLSWSRDW*SGQWCQ
Trigger: CTGACACCACTGCCCTGAGCACCAATCACGAGACCA...GGAGAGGCCTGTTTGGAGTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGCTCTGGTAGGAATTaGACAGGTTTTGGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEGSGRN*TGFGAL
Trigger: TAGGGCTCCAAAACCTGTGCAATTCCTACCAGAGCC...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR GCA 90 bp ACCACTCCCTGTTCACACGCACCTCCACGTGCAGCCCTTTATCTTTCTGAGCTCTTGGTCCTCAGCTTCTaGAGCTTCTCCTCCGTCTCG +
Preference number: 4 (lower is better)
Translates to: TTPCSHAPPRAALYLSELLVLSF*SFSSVS
Trigger: CGAGACGGAGGAGAAGCTGCAGAAGCTGAGGACCAA...GAGCTCAGAAAGATAAAGGGCTGCACGTGGAGGTGCGTGTGAACAGGGAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGCAGCCTCCAAGAGAGTaGGCATATGGATTAAACCTG +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGQPPRE*AYGLNL
Trigger: CAGGTTTAATCCATATGCCCACTCTCTTGGAGGCTG...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS-3UTR CCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGACTGGCAGCATCACTTaGATCCATTCCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVETGSIT*IHSCSI
Trigger: GATGGAGCAGGAATGGATCCAAGTGATGCTGCCAGT...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAACGAGCGCCGCTCTaGCTTCGTGCCCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHERAPL*LRALWG
Trigger: TCCCCAGAGGGCACGAAGCCAGAGCGGCGCTCGTTC...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp CAGCCGCACATCCTCACTGCCTTTCTCCACCCAGCGGTCTCTTGGTGTCGTGTCTTGGTGTCGTGTCTGTaGGCACGTAGTCAAACTTCA +
Preference number: 4 (lower is better)
Translates to: QPHILTAFLHPAVSWCRVLVSCL*ARSQTS
Trigger: TGAAGTTTGACTACGTGCCCACAGACACGACACCAA...GACACGACACCAAGAGACCGCTGGGTGGAGAAAGGCAGTGAGGATGTGCGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CCA 90 bp AGTGGGGCCAGGCCGAAGGGTGGAAGTAGAAAAGCATCAACAGGCTGTCCAGATCGATGGTCTCGTGATTaGTGCTCAGGGCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SGARPKGGSRKASTGCPDRWSRD*CSGQWC
Trigger: ACACCACTGCCCTGAGCACCAATCACGAGACCATCG...ATCTGGACAGCCTGTTGATGCTTTTCTACTTCCACCCTTCGGCCTGGCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TTCCGGAGAAGGGGGTTTCATCAGCCGCACATCCTCACTGCCTTTCTCCACCCAGGACAAGCAGGTCGATaGTCTCGTGATTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: FRRRGFHQPHILTAFLHPGQAGR*SRDWCS
Trigger: TGAGCACCAATCACGAGACCATCGACCTGCTTGTCC...TGGGTGGAGAAAGGCAGTGAGGATGTGCGGCTGATGAAACCCCCTTCTCCGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGCACTCAGCTGCTTCTTaGAGATGGGGAAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEHSAAS*RWGNLE
Trigger: CTCCAAGTTTCCCCATCTCCAAGAAGCAGCTGAGTG...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp GCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGAATCTGAGTCTCGTGTaGATGGTCCTGAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: ALPLELLQDGTGLAVILRNLSLV*MVLKEM
Trigger: CATCTCCTTCAGGACCATCCACACGAGACTCAGATT...CCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CCAAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACAGTCAGCCCTGCCCCTaGAGCTTCTCCAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: PRLGQSSSRRGQGLSVYYSQPCP*SFSKMA
Trigger: TGCCATCTTGGAGAAGCTCCAGGGGCAGGGCTGACT...GTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CCAAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACCGCCGTGATGGAACATaGAGGGAAGGCATGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PRLGQSSSRRGQGLSVYYRRDGT*REGMVC
Trigger: GCACACCATGCCTTCCCTCCATGTTCCATCACGGCG...GTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGAAAACACTAAAGTTTTaGCGCTACTGGACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGKTLKF*RYWTAS
Trigger: GGAGGCTGTCCAGTAGCGTCAAAACTTTAGTGTTTT...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS-3UTR TCA 90 bp TCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGCTCCGCACGGGTCTTaGAACGGCTTGACGTGTACT +
Preference number: 4 (lower is better)
Translates to: SLCLQKTQRPQIRVGRELAPHGS*NGLTCT
Trigger: AGTACACGTCAAGCCGTTTCAAGACCCGTGCGGAGC...CAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp CTCAACCTGGACTCAAGTTACTGTGGTGAGAAACCTCACTGTCCATGGTTAACTCCCTGGAGTCCCGCGTaGGGTCTCCACCTAGGCGTA +
Preference number: 4 (lower is better)
Translates to: LNLDSSYCGEKPHCPWLTPWSPA*GLHLGV
Trigger: TACGCCTAGGTGGAGACCTCACGCGGGACTCCAGGG...AGTTAACCATGGACAGTGAGGTTTCTCACCACAGTAACTTGAGTCCAGGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp GAGGAATCACCAGCTCAAGAAACCCCAAGACTTGGACAGTCTTCCAGCAGAAGATGCTGGGGGCGTTCCTaGTCACAGCAGGTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: EESPAQETPRLGQSSSRRCWGRS*SQQVKG
Trigger: CCCCTTTACCTGCTGTGATCAGGAACGCCCCCAGCA...TCTTCTGCTGGAAGACTGTCCAAGTCTTGGGGTTTCTTGAGCTGGTGATTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp GTTAAGGGACACAGATTGTGGCGCCGTGATGGAACATGGAGGGAAGGCATGGTGTTCCCCAGCACTGTCTaGGAGCTCATTCGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: VKGHRLWRRDGTWREGMVFPSTV*ELIRVL
Trigger: AAGGACTCGAATGAGCTCTCAGACAGTGCTGGGGAA...CACCATGCCTTCCCTCCATGTTCCATCACGGCGCCACAATCTGTGTCCCTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp TCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGGACCCCATGCTGCCTaGGATGAAGAGAGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SLCLQKTQRPQIRVGRELGPHAA*DEEREQ
Trigger: CTGCTCTCTCTCTTCATCTCAGGCAGCATGGGGTCC...CAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTTGTGAAAGCCATGACTaGAATAAGGTCTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVCESHD*NKVSSP
Trigger: AGGGCTGGAGACCTTATTGCAGTCATGGCTTTCACA...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGTCACTTCCTCCTCAGTaGGGAATGGAGAGTACTTAT +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRSLPPQ*GMESTY
Trigger: ATAAGTACTCTCCATTCCGCACTGAGGAGGAAGTGA...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp GTTAAGGGACACAGATTGTGGCGCCGTGATGGAACATGGAGGGAAGGCATGGTGCTCTGGGGACGTCTCTaGCATCTGGATATCTCTTGG +
Preference number: 4 (lower is better)
Translates to: VKGHRLWRRDGTWREGMVLWGRL*HLDISW
Trigger: CCAAGAGATATCCAGATGGCAGAGACGTCCCCAGAG...CACCATGCCTTCCCTCCATGTTCCATCACGGCGCCACAATCTGTGTCCCTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGCTCTTCAGCAATCCTTaGTACGTGCTCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRLFSNP*YVLCFL
Trigger: AAGAAAGCAGAGCACGTAGCAAGGATTGCTGAAGAG...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGTCTGTCAGTTGTTTCTaGTTCTCTTCCTGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRSVSCF*FSSCVF
Trigger: GAAGACGCAGGAAGAGAAGCAGAAACAACTGACAGA...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGGCCTCCTCCCGGGCTaGCAAAGCAGGGAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPGLLPG*QSRELW
Trigger: CCAAAGCTCCCTGCTTTGGCAGCCCGGGAGGAGGCC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGTTCATAGCACTCAGCTaGTTCTTGGAGATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGFIALS*FLEMGK
Trigger: TTTCCCCATCTCCAAGAAGCAGCTGAGTGCTATGAA...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
ENST00000675570.1
ENST00000675779.1
CDS-3UTR GCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCGCTTCCTCTCGGAGGTaGGCAGGCTTTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVASSRR*AGFPRR
Trigger: CCTCCGAGGAAAGCCTGCGCACCTCCGAGAGGAAGC...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675570.1
ENST00000675779.1
CDS-3UTR GCA 90 bp AGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCTTCCACCTTTTGCAGGAGTaGCACGATGTTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SGEKTSHSSVACIPHLCFHLLQE*HDVGPQ
Trigger: CTGAGGACCAACATCGTGGCACTCCTGCAAAAGGTG...GAAGCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp AAAAGCATCAACAGGCTGTCCAGATCAATTGGCACCATCCAAGGCCCTGCTGCAACCAACTCTGACAGCTaGGAGAGAGAGAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: KSINRLSRSIGTIQGPAATNSDS*ERESPS
Trigger: GGAGGGGCTCTCTCTCTCGCAGCTGTCAGAGTTGGT...TGCAGCAGGGCCTTGGATGGTGCCAATTGATCTGGACAGCCTGTTGATGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGTTCCACACTCAGTGTaGTGCCCAAGTCAGAGATTT +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEVPHSV*CPSQRF
Trigger: AAATCTCTGACTTGGGCAGCACACTGAGTGTGGAAC...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp GTCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTCATCCAAGGCCCTGCTaGACCCACACATGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VLVPSENPEAPNTSGKRVHPRPC*THTWRS
Trigger: TGACCTCCATGTGTGGGTGCAGCAGGGCCTTGGATG...AACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGAAGTCACAGTCCTTGTaGCTTCAGAAAACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEKSQSL*LQKTQR
Trigger: CCTCTGGGTTTTCTGAAGGCACAAGGACTGTGACTT...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGCAAGGAACGAGTTACTaGTTACCTCAGTGGCACCTA +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEQGTSY*LPQWHL
Trigger: TAGGTGCCACTGAGGTAACCAGTAACTCGTTCCTTG...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS-3UTR CCA 90 bp AGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCTTCTGCACCTTGTGCCCATaGATGAAGATCCTCATCCGG +
Preference number: 4 (lower is better)
Translates to: SGEKTSHSSVACIPHLCFCTLCP*MKILIR
Trigger: CCGGATGAGGATCTTCATCCATGGGCACAAGGTGCA...GAAGCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CCAAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACAGCAGGAGAGCCTCTTaGTCTGCACCTTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: PRLGQSSSRRGQGLSVYYSRRAS*SAPCAH
Trigger: ATGGGCACAAGGTGCAGACCAAGAGGCTCTCCTGCT...GTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTTTCCCCTCTGGGCGATaGCAATATCCTTCCAATACT +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVFPSGR*QYPSNT
Trigger: AGTATTGGAAGGATATTGCCATCGCCCAGAGGGGAA...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AAAAGCATCAACAGGCTGTCCAGATCAATTGGCACCATCCAAGGCCCTGCTGCATCACTGGATGGGGGCTaGTTCCAGTTGGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: KSINRLSRSIGTIQGPAASLDGG*FQLAER
Trigger: CCTCTCTGCCAACTGGAACCAGCCCCCATCCAGTGA...TGCAGCAGGGCCTTGGATGGTGCCAATTGATCTGGACAGCCTGTTGATGCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAATGTAACGCAGCTCACTaGATGGGGGCTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LLQDGTGLAVILRSQELKCNAAH*MGAGSS
Trigger: ACTGGAACCAGCCCCCATCCAGTGAGCTGCGTTACA...TTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGAGCTTCTCCTGCTGCTaGCGAATTTTCTCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVESFSCC*RIFSVS
Trigger: ACTGACAGAGAAAATTCGCCAGCAGCAGGAGAAGCT...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp TTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGGAGGGAGCGGATGGGTGTaGTTTTCTGAAGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LCLQKTQRPQIRVGRELGGSGWV*FSEGPP
Trigger: TGGAGGCCCTTCAGAAAACCACACCCATCCGCTCCC...TCCCAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCTTCTTCTTCAGGTCTGCTTaGGAGCGGATGGGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SGEKTSHSSVACIPHLCFFFRSA*ERMGVV
Trigger: AACCACACCCATCCGCTCCCAAGCAGACCTGAAGAA...GAAGCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAACAGCTATGGCCTGCTaGGCCACAGGGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHETAMAC*ATGPTS
Trigger: GGAGGTGGGCCCTGTGGCCCAGCAGGCCATAGCTGT...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGCTCTGCGACAGCTATaGCCTGCTGGGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPALRQL*PAGPQG
Trigger: GCCCTGTGGCCCAGCAGGCCATAGCTGTCGCAGAGC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp GGAAGTACCGTAAACAATTCCGGAGGATCTGGACAAGCAGGTCGATGGTCTCGTTGGTGCTCAGGGCAGTaGTGTCAGGCTCAATGCGGA +
Preference number: 4 (lower is better)
Translates to: GSTVNNSGGSGQAGRWSRWCSGQ*CQAQCG
Trigger: TCCGCATTGAGCCTGACACCACTGCCCTGAGCACCA...ACGAGACCATCGACCTGCTTGTCCAGATCCTCCGGAATTGTTTACGGTACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CCA 90 bp AGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCTTCGGACAAGCAGGTCGATaGTCTCGTGATTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SGEKTSHSSVACIPHLCFGQAGR*SRDWCS
Trigger: TGAGCACCAATCACGAGACCATCGACCTGCTTGTCC...GAAGCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AGTGGGGCCAGGCCGAAGGGTGGAAGTAGAAAAGCATCAACAGGCTGTCCAGATCAATTCCGGAGGATCTaGACAAGCAGGTCGATGGTC +
Preference number: 4 (lower is better)
Translates to: SGARPKGGSRKASTGCPDQFRRI*TSRSMV
Trigger: GACCATCGACCTGCTTGTCCAGATCCTCCGGAATTG...ATCTGGACAGCCTGTTGATGCTTTTCTACTTCCACCCTTCGGCCTGGCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAATTTCCTCGGAGGCCTTaGCCCGGGAGTCAGCACGGC +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEFPRRP*PGSQHG
Trigger: GCCGTGCTGACTCCCGGGCCAAGGCCTCCGAGGAAA...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCTTCCCTCAAGCTGTTTaGACGCCACAGCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLFPQAV*TPQPGP
Trigger: TGGTCCTGGCTGTGGCGTCCAAACAGCTTGAGGGAA...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCGCTGTCCAGATCAATTaGCACCATCCAAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLAVQIN*HHPRPC
Trigger: GCAGGGCCTTGGATGGTGCCAATTGATCTGGACAGC...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAACTTCCCATTCCAGTGTaGCCTGCATCCCTCACCTCT +
Preference number: 4 (lower is better)
Translates to: LLQDGTGLAVILRSQELKLPIPV*PASLTS
Trigger: AGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAG...TTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CAA 72 bp GAGGTGGTTAGACAGGATCTTTTTCCCTCAAGCTGTTaGGACGCCACAGCCAGGACCAACTCTGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: EVVRQDLFPSSC*DATARTNSDSC
Trigger: GCAGCTGTCAGAGTTGGTCCTGGCTGTGGCGTCCAAACAGCTTGAGGGAAAAAGATCCTGTCTAACCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGCAGACCATGTTGGAGTaGTTAGATTACTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGQTMLE*LDYSFM
Trigger: CATGAAGGAGTAATCTAATCACTCCAACATGGTCTG...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS-3UTR TCA 90 bp AGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCTTCGGCTACAGTTGTAGATaGACATGCCATCCAGATCCC +
Preference number: 4 (lower is better)
Translates to: SGEKTSHSSVACIPHLCFGYSCR*TCHPDP
Trigger: GGGATCTGGATGGCATGTTCATCTACAACTGTAGCC...GAAGCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATCCACCAACCCATGAATaGAGTCCCCTCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHPPTHE*SPLPLQ
Trigger: CTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGG...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR TCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCGCGACCACCAACCCATaGATGAAGTCCCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVATTNP*MKSPPP
Trigger: AGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGC...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675570.1
ENST00000675779.1
CDS-3UTR TCA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCTCGTGTGGATGGTCCTaGAGGAGATGGTCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLSCGWS*RRWSLS
Trigger: ACTCAAGGACCATCTCCTTCAGGACCATCCACACGA...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp CCTCACTGCCTTTCTCCACCCAGCGGTCTCTTGGTGTCGTGTCTGTGGGCACGTGCTCATCATCTGTGTTaGTGTCTATGTCCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: PHCLSPPSGLLVSCLWARAHHLC*CLCPFA
Trigger: TGCAAAAGGACATAGACATCAACACAGATGATGAGC...ACGTGCCCACAGACACGACACCAAGAGACCGCTGGGTGGAGAAAGGCAGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGGCATCAGCATCTCTTaGATTATCAACCAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVGISIS*IINQFS
Trigger: GCTGAACTGGTTGATAATGCAAGAGATGCTGATGCC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGCTCTTCAGCAATCCTTaGTACGTGCTCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVELFSNP*YVLCFL
Trigger: AAGAAAGCAGAGCACGTAGCAAGGATTGCTGAAGAG...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp AAAAGCATCAACAGGCTGTCCAGATCAATTGGCACCATCCAAGGCCCTGCTGCAATTGCTCGGAGCAGGTaGCGGTACTCCTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: KSINRLSRSIGTIQGPAAIARSR*RYSLAS
Trigger: TGATGCCAAGGAGTACCGGCACCTGCTCCGAGCAAT...TGCAGCAGGGCCTTGGATGGTGCCAATTGATCTGGACAGCCTGTTGATGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTTCTGTCAGTTGTTTCTaGTTCTCTTCCTGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVSVSCF*FSSCVF
Trigger: GAAGACGCAGGAAGAGAAGCAGAAACAACTGACAGA...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp TCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGAGGGGCAGGTCGGGATaGAGTCTTGACGAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: SLCLQKTQRPQIRVGRELRGRSG*SLDESV
Trigger: AACACTCTCGTCAAGACTGCATCCCGACCTGCCCCT...CAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGTTCATAGCACTCAGCTaGTTCTTGGAGATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEFIALS*FLEMGK
Trigger: TTTCCCCATCTCCAAGAAGCAGCTGAGTGCTATGAA...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR GCA 90 bp AGTGGGGCCAGGCCGAAGGGTGGAAGTAGAAAAGCATCAACAGGCTGTCCAGATGGCTCTGGTAGGAATTaGACAGGTTTTGGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: SGARPKGGSRKASTGCPDGSGRN*TGFGAL
Trigger: TAGGGCTCCAAAACCTGTGCAATTCCTACCAGAGCC...ATCTGGACAGCCTGTTGATGCTTTTCTACTTCCACCCTTCGGCCTGGCCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAGCTTCCTCTCGGAGGTaGGCAGGCTTTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEASSRR*AGFPRR
Trigger: CCTCCGAGGAAAGCCTGCGCACCTCCGAGAGGAAGC...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR GCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGCTTCCTCTCGGAGGTaGGCAGGCTTTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPASSRR*AGFPRR
Trigger: CCTCCGAGGAAAGCCTGCGCACCTCCGAGAGGAAGC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR GCA 90 bp GTCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTTTGGTCCTCAGCTTCTaGAGCTTCTCCTCCGTCTCG +
Preference number: 4 (lower is better)
Translates to: VLVPSENPEAPNTSGKRVLVLSF*SFSSVS
Trigger: CGAGACGGAGGAGAAGCTGCAGAAGCTGAGGACCAA...AACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGATGTCTATGTCCTTTTaGAGGAGTGCCACGATGTTG +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEMSMSF*RSATML
Trigger: CAACATCGTGGCACTCCTGCAAAAGGACATAGACAT...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445980.5
CDS-3UTR CCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGTACTGGTTACCTCAGTaGCACCTAGAGGATACTTAC +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEYWLPQ*HLEDTY
Trigger: GTAAGTATCCTCTAGGTGCCACTGAGGTAACCAGTA...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS-3UTR CCA 90 bp CCAAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACGCCGACTTCCCAAACTaGATCACACTGGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: PRLGQSSSRRGQGLSVYYADFPN*ITLAAS
Trigger: TGATGCTGCCAGTGTGATCCAGTTTGGGAAGTCGGC...GTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAAACTCAGGTGTTCGCTTaGCCGACTTCCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: LLQDGTGLAVILRSQELKTQVFA*PTSQTG
Trigger: TCCAGTTTGGGAAGTCGGCCAAGCGAACACCTGAGT...TTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGATTCCAGGTGGGCAGTaGGACTATCACTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEIPGGQ*DYHFIN
Trigger: ATTGATGAAGTGATAGTCCCACTGCCCACCTGGAAT...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTATTCCAGGTGGGCAGTaGGACTATCACTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVIPGGQ*DYHFIN
Trigger: ATTGATGAAGTGATAGTCCCACTGCCCACCTGGAAT...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGCTCCTCAGTGCGGAATaGAGAGTACTTATAGATGAG +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVELLSAE*RVLIDE
Trigger: CTCATCTATAAGTACTCTCCATTCCGCACTGAGGAG...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGGAATCTTCATAAACTaGGTCATCACTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRGIFIN*VITSSS
Trigger: TGAGGAGGAAGTGATGACCCAGTTTATGAAGATTCC...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGACGTCTCTGCCATCTaGATATCTCTTGGATTTGAG +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEDVSAI*ISLGFE
Trigger: CTCAAATCCAAGAGATATCCAGATGGCAGAGACGTC...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp GTAGTAGATGAGGTGGTTAGACAGGATCTTTTTCCCTCAAGCTGTTTGGACGCCTGGCTTCGTGCCCTCTaGGGACGTCTCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: VVDEVVRQDLFPSSCLDAWLRAL*GRLCHL
Trigger: CAGATGGCAGAGACGTCCCCAGAGGGCACGAAGCCA...GGCGTCCAAACAGCTTGAGGGAAAAAGATCCTGTCTAACCACCTCATCTACTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AGCCAGGAGCTGAAATGGCTCCGGCTTAGCAACCCAGTATGGCCAAAGTGGAAAGTGATGGCTCTGTTCTaGACCTGTCGCAACATCACC +
Preference number: 4 (lower is better)
Translates to: SQELKWLRLSNPVWPKWKVMALF*TCRNIT
Trigger: GGTGATGTTGCGACAGGTCCAGAACAGAGCCATCAC...TTTCCACTTTGGCCATACTGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGCTGCTTGGGAGCGGATaGGTGTGGTTTTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SLCLQKTQRPQIRVGRELLLGSG*VWFSEG
Trigger: CCCTTCAGAAAACCACACCCATCCGCTCCCAAGCAG...CAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AAAAGCATCAACAGGCTGTCCAGATCAATTGGCACCATCCAAGGCCCTGCTGCACCTCAGTGGAAGGTCTaGTGGTCACTTCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: KSINRLSRSIGTIQGPAAPQWKV*WSLPRA
Trigger: TGCCCTTGGAAGTGACCACCAGACCTTCCACTGAGG...TGCAGCAGGGCCTTGGATGGTGCCAATTGATCTGGACAGCCTGTTGATGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AGCCAGGAGCTGAAATGGCTCCGGCTTAGCAACCCAGTATGGCCAAAGTGGAAACAAAGCAGGGAGCTTTaGGGTACTGCTGATGACAGG +
Preference number: 4 (lower is better)
Translates to: SQELKWLRLSNPVWPKWKQSREL*GTADDR
Trigger: CCTGTCATCAGCAGTACCCCAAAGCTCCCTGCTTTG...TTTCCACTTTGGCCATACTGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TCCAGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCTTGGTGTCGTGTCTGTaGGCACGTAGTCAAACTTCA +
Preference number: 4 (lower is better)
Translates to: SSGEKTSHSSVACIPHLCLVSCL*ARSQTS
Trigger: TGAAGTTTGACTACGTGCCCACAGACACGACACCAA...GCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TGTCTGAGAGCCTTCTGCTACCTTTACGAACAAGACAGCAGGCAAGGGACATGTGGAGGCATTCGGAAGTaGAGGGCTCTGCGACAGCTA +
Preference number: 4 (lower is better)
Translates to: CLRAFCYLYEQDSRQGTCGGIRK*RALRQL
Trigger: TAGCTGTCGCAGAGCCCTCCACTTCCGAATGCCTCC...ACATGTCCCTTGCCTGCTGTCTTGTTCGTAAAGGTAGCAGAAGGCTCTCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CCA 90 bp TCAGGCTCAATGCGGAGGCATTCGGAAGTGGAGGGCTCTGCGACAGCTATGGCCGAATTGCACAGGTTTTaGAGCCCTACTTCATATTGC +
Preference number: 4 (lower is better)
Translates to: SGSMRRHSEVEGSATAMAELHRF*SPTSYC
Trigger: GCAATATGAAGTAGGGCTCCAAAACCTGTGCAATTC...GGCCATAGCTGTCGCAGAGCCCTCCACTTCCGAATGCCTCCGCATTGAGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGAATTGCACAGGTTTTaGAGCCCTACTTCATATTGC +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGELHRF*SPTSYC
Trigger: GCAATATGAAGTAGGGCTCCAAAACCTGTGCAATTC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
ENST00000675570.1
ENST00000675779.1
CDS-3UTR CCA 90 bp TTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACTCCAAACAGGCCTCTCCCCCAGTTCAGGGTGGTaGTCAGATTACCTCACACTT +
Preference number: 4 (lower is better)
Translates to: FQQKRPGSLSVLLQTGLSPSSGW*SDYLTL
Trigger: AAGTGTGAGGTAATCTGACCACCACCCTGAACTGGG...GGAGAGGCCTGTTTGGAGTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAAAGAGAGAGAGCAGGATaGCAGAGGAATCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: LLQDGTGLAVILRSQELKRERAG*QRNHQL
Trigger: GAGCTGGTGATTCCTCTGCCATCCTGCTCTCTCTCT...TTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGAACATCCTTTGCATGTaGTCCAAGAAAGGTGAACTT +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRNILCM*SKKGEL
Trigger: AAGTTCACCTTTCTTGGATCACATGCAAAGGATGTT...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS-3UTR TCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCATGCTGGGGGCGTTCCTaGTCACAGCAGGTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPCWGRS*SQQVKG
Trigger: CCCCTTTACCTGCTGTGATCAGGAACGCCCCCAGCA...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATAGGTCGATGGTCTCGTaGTTGGTGCTCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHRSMVS*LVLRAV
Trigger: CACTGCCCTGAGCACCAATCACGAGACCATCGACCT...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR TCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCAGGTCGATGGTCTCGTaGTTGGTGCTCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVRSMVS*LVLRAV
Trigger: CACTGCCCTGAGCACCAATCACGAGACCATCGACCT...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675570.1
ENST00000675779.1
CDS-3UTR TCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGCGACCACCAACCCATaGATGAAGTCCCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPATTNP*MKSPPP
Trigger: AGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR TCA 90 bp AGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCTTCCTTCTGTCAGAAAACTaGTCAGCCATGTCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: SGEKTSHSSVACIPHLCFLLSEN*SAMSSP
Trigger: TGGCGAAGACATGGCTGATCAGTTTTCTGACAGAAG...GAAGCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTCCTTCAGAAAGAACTTaGGTAGTAGATGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVPSERT*VVDEVV
Trigger: AACCACCTCATCTACTACTCAAGTTCTTTCTGAAGG...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCCAGACTGGCAGGCTGTaGGAGCAGGAACCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVQTGRL*EQEPSL
Trigger: CAGAGAAGGTTCCTGCTCTCACAGCCTGCCAGTCTG...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR GCA 90 bp TCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGCCTTGCTACGTGCTCTaGTTTCTTCACCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SLCLQKTQRPQIRVGRELPCYVL*FLHLLL
Trigger: GAGCAGGAGGTGAAGAAAGCAGAGCACGTAGCAAGG...CAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCGCAATCCTTGCTACGTaGTCTGCTTTCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLAILAT*SAFFTS
Trigger: GGAGGTGAAGAAAGCAGAGCACGTAGCAAGGATTGC...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp CTTGCCTTTGTCTTTGACCCTGAGAAGTTAAGGGACACAGATTGTGGCGCCGTGTCCTCCTGCACCTTTTaGAGGAGTGCCACGATGTTG +
Preference number: 4 (lower is better)
Translates to: LAFVFDPEKLRDTDCGAVSSCTF*RSATML
Trigger: CAACATCGTGGCACTCCTGCAAAAGGTGCAGGAGGA...CACGGCGCCACAATCTGTGTCCCTTAACTTCTCAGGGTCAAAGACAAAGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCCAACAGGCTAAGGGGTaGTCCCCACTTCTGGGCTAC +
Preference number: 4 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVQQAKG*SPLLGY
Trigger: GTAGCCCAGAAGTGGGGAGCACCCCTTAGCCTGTTG...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR CCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCATGGCTTCGTGCCCTCTaGGGACGTCTCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPWLRAL*GRLCHL
Trigger: CAGATGGCAGAGACGTCCCCAGAGGGCACGAAGCCA...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp CTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAATGTACTTGTACATCCTaGGCTTGTACAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLQDGTGLAVILRSQELKCTCTS*ACTGSR
Trigger: CCTGCTGCCTGTACAAGCCCAGGATGTACAAGTACA...TTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CTCAACCTGGACTCAAGTTACTGTGGTGAGAAACCTCACTGTCCATGGTTAACTTCGGGGTGCCTCAGGTaGCTGGAGCAGCCTAGATGT +
Preference number: 4 (lower is better)
Translates to: LNLDSSYCGEKPHCPWLTSGCLR*LEQPRC
Trigger: ACATCTAGGCTGCTCCAGCCACCTGAGGCACCCCGA...AGTTAACCATGGACAGTGAGGTTTCTCACCACAGTAACTTGAGTCCAGGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATTGGTGCTCAGGGCAGTaGTGTCAGGCTCAATGCGGA +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHWCSGQ*CQAQCG
Trigger: TCCGCATTGAGCCTGACACCACTGCCCTGAGCACCA...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp AGCCAGGAGCTGAAATGGCTCCGGCTTAGCAACCCAGTATGGCCAAAGTGGAAACACTCAGCTGCTTCTTaGAGATGGGGAAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: SQELKWLRLSNPVWPKWKHSAAS*RWGNLE
Trigger: CTCCAAGTTTCCCCATCTCCAAGAAGCAGCTGAGTG...TTTCCACTTTGGCCATACTGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CCAAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACTCTCCAAGATGGCACTaGACTCGCCGTTATCTTGAG +
Preference number: 4 (lower is better)
Translates to: PRLGQSSSRRGQGLSVYYSPRWH*TRRYLE
Trigger: CTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGA...GTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACTCGGAGCTTCTCCAAGATaGCACTGGACTCGCCGTTAT +
Preference number: 4 (lower is better)
Translates to: KTWTVFQQKRPGSLSVLLGASPR*HWTRRY
Trigger: ATAACGGCGAGTCCAGTGCCATCTTGGAGAAGCTCC...GAGTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CCAAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACCCTAGAGATGTAGTCTaGGAAGGTCCAAAACCCACC +
Preference number: 4 (lower is better)
Translates to: PRLGQSSSRRGQGLSVYYPRDVV*EGPKPT
Trigger: GGTGGGTTTTGGACCTTCCCAGACTACATCTCTAGG...GTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGAGAACTTCGTTTTTATaGCTTGGAGGGTTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGRTSFL*LGGFSN
Trigger: GTTTGAGAACCCTCCAAGCCATAAAAACGAAGTTCT...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR TCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGAGTACTTATAGATaGGTTCTGTCTCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVESTYR*VLSQWQ
Trigger: TTGCCATTGAGACAGAACTCATCTATAAGTACTCTC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGCCCGGTGTTCAATGTTaGCACCAAAAACAAAATTCA +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEPGVQC*HQKQNS
Trigger: TGAATTTTGTTTTTGGTGTCAACATTGAACACCGGG...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp TTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGGAGGAGAGTTTGATGGGTaGCTCTGTCTTCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: LCLQKTQRPQIRVGRELGGEFDG*LCLLHH
Trigger: GTGGTGAAGAAGACAGAGTCACCCATCAAACTCTCC...TCCCAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp GAGGAATCACCAGCTCAAGAAACCCCAAGACTTGGACAGTCTTCCAGCAGAAGACTTTCTGAGCTCTCTTaGGGTCAGCCGAGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: EESPAQETPRLGQSSSRRLSELS*GQPSPL
Trigger: AAGAGGACTCGGCTGACCTCAAGAGAGCTCAGAAAG...TCTTCTGCTGGAAGACTGTCCAAGTCTTGGGGTTTCTTGAGCTGGTGATTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp CTCAACCTGGACTCAAGTTACTGTGGTGAGAAACCTCACTGTCCATGGTTAACTCAGATTGTGGCGCCGTaGTGGAACATGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LNLDSSYCGEKPHCPWLTQIVAP*WNMEGR
Trigger: CCTTCCCTCCATGTTCCATCACGGCGCCACAATCTG...AGTTAACCATGGACAGTGAGGTTTCTCACCACAGTAACTTGAGTCCAGGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGCTTCAGTAAGTCTGTaGTCCTTAATGACAGTTAAA +
Preference number: 4 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGASVSL*SLMTVK
Trigger: TTTAACTGTCATTAAGGAGCACAGACTTACTGAAGC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp TTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGGATCTTTAAGTGCTCGCTaGTTGGCCTCCTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: LCLQKTQRPQIRVGRELGSLSAR*LASLIL
Trigger: GAGGATCAAGGAGGCCAAGCAGCGAGCACTTAAAGA...TCCCAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATATTGCTCGGAGCAGGTaGCGGTACTCCTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHIARSR*RYSLAS
Trigger: TGATGCCAAGGAGTACCGGCACCTGCTCCGAGCAAT...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp AAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACTCATATCCTTCCAATACTaGGCCAGGTGCTCCCCCATT +
Preference number: 4 (lower is better)
Translates to: KTWTVFQQKRPGSLSVLLISFQY*ARCSPI
Trigger: AATGGGGGAGCACCTGGCGCAGTATTGGAAGGATAT...GAGTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp GAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCCTTTGGTGTCAGGCTCAATaGGGAGGCATTCGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: EVLNVGVQLIICVDVYVLWCQAQ*GGIRKW
Trigger: CCACTTCCGAATGCCTCCGCATTGAGCCTGACACCA...AAGGACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR GCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCTGGTGTCAGGCTCAATaGGGAGGCATTCGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVWCQAQ*GGIRKW
Trigger: CCACTTCCGAATGCCTCCGCATTGAGCCTGACACCA...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675570.1
ENST00000675779.1
CDS-3UTR GCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATTGGTCTCGTGATTGGTaGTCAGGGCAGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHWSRDW*SGQWCQ
Trigger: CTGACACCACTGCCCTGAGCACCAATCACGAGACCA...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR GCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCTGGTCTCGTGATTGGTaGTCAGGGCAGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVWSRDW*SGQWCQ
Trigger: CTGACACCACTGCCCTGAGCACCAATCACGAGACCA...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675570.1
ENST00000675779.1
CDS-3UTR GCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATTTGGTCCTCAGCTTCTaGAGCTTCTCCTCCGTCTCG +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHLVLSF*SFSSVS
Trigger: CGAGACGGAGGAGAAGCTGCAGAAGCTGAGGACCAA...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR GCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCTTGGTCCTCAGCTTCTaGAGCTTCTCCTCCGTCTCG +
Preference number: 4 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVLVLSF*SFSSVS
Trigger: CGAGACGGAGGAGAAGCTGCAGAAGCTGAGGACCAA...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675570.1
ENST00000675779.1
CDS-3UTR GCA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCTTATATGGCGCAAGTTaGAGCTTCACCACCTCCCAA +
Preference number: 4 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLLYGAS*SFTTSQ
Trigger: TTGGGAGGTGGTGAAGCTGCAACTTGCGCCATATAA...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp AAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACTCCCACACTCAGTGTGCTaGCCAAGTCAGAGATTTACC +
Preference number: 4 (lower is better)
Translates to: KTWTVFQQKRPGSLSVLLPHSVC*PSQRFT
Trigger: GGTAAATCTCTGACTTGGGCAGCACACTGAGTGTGG...GAGTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCATGCTTCCTGCAGAGATaGCTCTGGAGTCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPCFLQR*LWSPCG
Trigger: GCCACAGGGACTCCAGAGGCATCTCTGCAGGAAGCA...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp TGGGGAAACTTGGAGGCAGGAAGTACCGTAAACAATTCCGGAGGATCTGGACAAGTCCTTTTGCAGGAGTaGCACGATGTTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: WGNLEAGSTVNNSGGSGQVLLQE*HDVGPQ
Trigger: CTGAGGACCAACATCGTGGCACTCCTGCAAAAGGAC...TTGTCCAGATCCTCCGGAATTGTTTACGGTACTTCCTGCCTCCAAGTTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR GCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCCGTCGGAATGTCTCCTaGACCTTTTGCAGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVRRNVS*TFCRSA
Trigger: GGCACTCCTGCAAAAGGTGCAGGAGACATTCCGACG...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR CCA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGCACATTTCACTCCAGTaGGATACATCTCAAAAAGTG +
Preference number: 4 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEHISLQ*DTSQKV
Trigger: CACTTTTTGAGATGTATCCCACTGGAGTGAAATGTG...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS-3UTR CCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATAGCAGGAGAGCCTCTTaGTCTGCACCTTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHSRRAS*SAPCAH
Trigger: ATGGGCACAAGGTGCAGACCAAGAGGCTCTCCTGCT...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCATCACTGGATGGGGGCTaGTTCCAGTTGGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPSLDGG*FQLAER
Trigger: CCTCTCTGCCAACTGGAACCAGCCCCCATCCAGTGA...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp TCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGAGACACAAATCGCACTaGATGGTGGTGGGGATTTCC +
Preference number: 4 (lower is better)
Translates to: SLCLQKTQRPQIRVGRELRHKSH*MVVGIS
Trigger: GGAAATCCCCACCACCATCCAGTGCGATTTGTGTCT...CAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp GAGGAATCACCAGCTCAAGAAACCCCAAGACTTGGACAGTCTTCCAGCAGAAGACAGGATCAGGGTTCATaGAGCAAACCCAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: EESPAQETPRLGQSSSRRQDQGS*SKPRCQ
Trigger: CTGACACCTGGGTTTGCTCCATGAACCCTGATCCTG...TCTTCTGCTGGAAGACTGTCCAAGTCTTGGGGTTTCTTGAGCTGGTGATTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGGGAGCGGATGGGTGTaGTTTTCTGAAGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPGSGWV*FSEGPP
Trigger: TGGAGGCCCTTCAGAAAACCACACCCATCCGCTCCC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAATCGGGGCTGGCTGGCTaGTCTAGGAGTTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHESGLAG*SRSWQR
Trigger: TCTTTGCCAACTCCTAGACCAGCCAGCCAGCCCCGA...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp GTAGTAGATGAGGTGGTTAGACAGGATCTTTTTCCCTCAAGCTGTTTGGACGCCCCTCCCGAGGGCTCTTaGAGTTGGGCAGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: VVDEVVRQDLFPSSCLDAPPEGS*SWAVKM
Trigger: CATCTTTACTGCCCAACTCCAAGAGCCCTCGGGAGG...GGCGTCCAAACAGCTTGAGGGAAAAAGATCCTGTCTAACCACCTCATCTACTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAGGAGGCATTCGGAAGTaGAGGGCTCTGCGACAGCTA +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEGGIRK*RALRQL
Trigger: TAGCTGTCGCAGAGCCCTCCACTTCCGAATGCCTCC...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCATGGTGCTCAGGGCAGTaGTGTCAGGCTCAATGCGGA +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPWCSGQ*CQAQCG
Trigger: TCCGCATTGAGCCTGACACCACTGCCCTGAGCACCA...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCCGATGGTCTCGTGATTaGTGCTCAGGGCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVRWSRD*CSGQWC
Trigger: ACACCACTGCCCTGAGCACCAATCACGAGACCATCG...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675570.1
ENST00000675779.1
CDS-3UTR CCA 90 bp AGCCAGGAGCTGAAATGGCTCCGGCTTAGCAACCCAGTATGGCCAAAGTGGAAAAAACCCAGTTCAGGGTaGTGGTCAGATTACCTCACA +
Preference number: 4 (lower is better)
Translates to: SQELKWLRLSNPVWPKWKKPSSG*WSDYLT
Trigger: TGTGAGGTAATCTGACCACCACCCTGAACTGGGTTT...TTTCCACTTTGGCCATACTGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp GTCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTCGACGGAGTGTTATATaGCGCAAGTTGCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VLVPSENPEAPNTSGKRVRRSVI*RKLQLH
Trigger: GTGAAGCTGCAACTTGCGCCATATAACACTCCGTCG...AACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACTCGAGATGGTCCTTGAGTaGGTGGTTTATGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: KTWTVFQQKRPGSLSVLLEMVLE*VVYDCS
Trigger: GGAGCAGTCATAAACCACCCACTCAAGGACCATCTC...GAGTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AGCCAGGAGCTGAAATGGCTCCGGCTTAGCAACCCAGTATGGCCAAAGTGGAAAAGAAACCCCAAGACTTaGACAGTCTTCCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SQELKWLRLSNPVWPKWKRNPKT*TVFQQK
Trigger: CTTCTGCTGGAAGACTGTCCAAGTCTTGGGGTTTCT...TTTCCACTTTGGCCATACTGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCTATTCAAAGGTTAGCTaGGCTCGATTCAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLYSKVS*ARFRLL
Trigger: CAGCAGTCTGAATCGAGCTCAGCTAACCTTTGAATA...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATCCAAACAAGAATTCGTaGGTGGTTCTCGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHPNKNS*VVLGLP
Trigger: TGGGAGGCCGAGAACCACTCACGAATTCTTGTTTGG...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS-3UTR TCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAACCGTACTGCCCAATCTaGGTAGACTCAGGTGTTCGC +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEPYCPI*VDSGVR
Trigger: GCGAACACCTGAGTCTACTCAGATTGGGCAGTACGG...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp GAGGAATCACCAGCTCAAGAAACCCCAAGACTTGGACAGTCTTCCAGCAGAAGAATGCCTTCTTCCTCATaGAACGTGCGAGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: EESPAQETPRLGQSSSRRMPSSS*NVRDRK
Trigger: CTTCCTGTCTCGCACGTTTCATGAGGAAGAAGGCAT...TCTTCTGCTGGAAGACTGTCCAAGTCTTGGGGTTTCTTGAGCTGGTGATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAATCTCTACATTGTCTGTaGCAGGTTCCCGGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHESLHCL*QVPGSE
Trigger: CTCGGACCCGGGAACCTGTCACAGACAATGTAGAGA...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCACTTCTCTGCGCAGAGTaGTGGCTCTGTTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPLLCAE*WLCSGP
Trigger: AGGTCCAGAACAGAGCCATCACTCTGCGCAGAGAAG...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAACTTCTCTGCGCAGAGTaGTGGCTCTGTTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHELLCAE*WLCSGP
Trigger: AGGTCCAGAACAGAGCCATCACTCTGCGCAGAGAAG...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp TCCAGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCCTTTCTCATACATTTTaGTCAGTCGGCTACAGTTGT +
Preference number: 4 (lower is better)
Translates to: SSGEKTSHSSVACIPHLCLSHTF*SVGYSC
Trigger: ACAACTGTAGCCGACTGATCAAAATGTATGAGAAAG...GCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCCTGTCCATGGTTAACTaGAGAAATCCCTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLLSMVN*RNPSFR
Trigger: TCTGAAGGAGGGATTTCTTCAGTTAACCATGGACAG...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGCTTTTAGCATTAAGTTaGGATAGCTCAATTCAGACA +
Preference number: 4 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRLLALS*DSSIQT
Trigger: TGTCTGAATTGAGCTATCGCAACTTAATGCTAAAAG...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGTCCTCTCGTCTTTCTaGATAAATATCTATTCTGGT +
Preference number: 4 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVVLSSF*INIYSG
Trigger: ACCAGAATAGATATTTATGCAGAAAGACGAGAGGAC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAAGGGGCAGGTCGGGATaGAGTCTTGACGAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPRGRSG*SLDESV
Trigger: AACACTCTCGTCAAGACTGCATCCCGACCTGCCCCT...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp GTAGTAGATGAGGTGGTTAGACAGGATCTTTTTCCCTCAAGCTGTTTGGACGCCAAAGATGGTGACAGTTaGTGCACCAGAGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VVDEVVRQDLFPSSCLDAKDGDS*CTRGAG
Trigger: ACCTGCCCCTCTGGTGCAGCAACTGTCACCATCTTT...GGCGTCCAAACAGCTTGAGGGAAAAAGATCCTGTCTAACCACCTCATCTACTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCACAAATCTGCCCCGCTTaGACCTCTCCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPQICPA*TSPSSS
Trigger: AGAGGAGGAAGGAGAGGTGCAAGCGGGGCAGATTTG...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATCCTTCACAACAAATCTaGCCCGCTTGCACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHPSQQI*PACTSP
Trigger: AGGAGAGGTGCAAGCGGGGCAGATTTGTTGTGAAGG...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCATGGTGTCAGGCTCAATaGGGAGGCATTCGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPWCQAQ*GGIRKW
Trigger: CCACTTCCGAATGCCTCCGCATTGAGCCTGACACCA...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR GCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCCACCTTTTGCAGGAGTaGCACGATGTTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVHLLQE*HDVGPQ
Trigger: CTGAGGACCAACATCGTGGCACTCCTGCAAAAGGTG...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR CCA 90 bp GAGGAATCACCAGCTCAAGAAACCCCAAGACTTGGACAGTCTTCCAGCAGAAGAACTGGCAGCATCACTTaGATCCATTCCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: EESPAQETPRLGQSSSRRTGSIT*IHSCSI
Trigger: GATGGAGCAGGAATGGATCCAAGTGATGCTGCCAGT...TCTTCTGCTGGAAGACTGTCCAAGTCTTGGGGTTTCTTGAGCTGGTGATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCCTCCTCAGTGCGGAATaGAGAGTACTTATAGATGAG +
Preference number: 4 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLLLSAE*RVLIDE
Trigger: CTCATCTATAAGTACTCTCCATTCCGCACTGAGGAG...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATTTCTTCAGGTCTGCTTaGGAGCGGATGGGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHFFRSA*ERMGVV
Trigger: AACCACACCCATCCGCTCCCAAGCAGACCTGAAGAA...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp GAGGAATCACCAGCTCAAGAAACCCCAAGACTTGGACAGTCTTCCAGCAGAAGACAGTGGAAGGTCTGGTaGTCACTTCCAAGGGCAATT +
Preference number: 4 (lower is better)
Translates to: EESPAQETPRLGQSSSRRQWKVW*SLPRAI
Trigger: AATTGCCCTTGGAAGTGACCACCAGACCTTCCACTG...TCTTCTGCTGGAAGACTGTCCAAGTCTTGGGGTTTCTTGAGCTGGTGATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGCACAGGTTCCTCAGTaGAAGGTCTGGTGGTCACTT +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHAQVPQ*KVWWSL
Trigger: AAGTGACCACCAGACCTTCCACTGAGGAACCTGTGC...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAACGATGGTCTCGTGATTaGTGCTCAGGGCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHERWSRD*CSGQWC
Trigger: ACACCACTGCCCTGAGCACCAATCACGAGACCATCG...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCCAATTCCGGAGGATCTaGACAAGCAGGTCGATGGTC +
Preference number: 4 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVQFRRI*TSRSMV
Trigger: GACCATCGACCTGCTTGTCCAGATCCTCCGGAATTG...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675570.1
ENST00000675779.1
CDS-3UTR CCA 90 bp TCTGTGTTGATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCTTTCCTCGGAGGCCTTaGCCCGGGAGTCAGCACGGC +
Preference number: 4 (lower is better)
Translates to: SVLMSMSVSPYEPPSVILFPRRP*PGSQHG
Trigger: GCCGTGCTGACTCCCGGGCCAAGGCCTCCGAGGAAA...GAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACATCAACACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR CCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGGAGTGCCACGATGTTaGTCCTCAGCTTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPGVPRC*SSASAA
Trigger: AGCTGCAGAAGCTGAGGACCAACATCGTGGCACTCC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp CTCAACCTGGACTCAAGTTACTGTGGTGAGAAACCTCACTGTCCATGGTTAACTGGAGTGCCACGATGTTaGTCCTCAGCTTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LNLDSSYCGEKPHCPWLTGVPRC*SSASAA
Trigger: AGCTGCAGAAGCTGAGGACCAACATCGTGGCACTCC...AGTTAACCATGGACAGTGAGGTTTCTCACCACAGTAACTTGAGTCCAGGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CTCAACCTGGACTCAAGTTACTGTGGTGAGAAACCTCACTGTCCATGGTTAACTAGCCAGGAGCTGAAATaGCTCCGGCTTAGCAACCCA +
Preference number: 4 (lower is better)
Translates to: LNLDSSYCGEKPHCPWLTSQELK*LRLSNP
Trigger: TGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCT...AGTTAACCATGGACAGTGAGGTTTCTCACCACAGTAACTTGAGTCCAGGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp GTAGTAGATGAGGTGGTTAGACAGGATCTTTTTCCCTCAAGCTGTTTGGACGCCAAGGGACACAGATTGTaGCGCCGTGATGGAACATGG +
Preference number: 4 (lower is better)
Translates to: VVDEVVRQDLFPSSCLDAKGHRL*RRDGTW
Trigger: CCATGTTCCATCACGGCGCCACAATCTGTGTCCCTT...GGCGTCCAAACAGCTTGAGGGAAAAAGATCCTGTCTAACCACCTCATCTACTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGGCCCCAAATACGAGTaGGAAGAGAGTTGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SLCLQKTQRPQIRVGRELGPKYE*EESWEK
Trigger: TTTTTCCCAACTCTCTTCCCACTCGTATTTGGGGCC...CAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp GTTAAGGGACACAGATTGTGGCGCCGTGATGGAACATGGAGGGAAGGCATGGTGCCCGGTGTTCAATGTTaGCACCAAAAACAAAATTCA +
Preference number: 4 (lower is better)
Translates to: VKGHRLWRRDGTWREGMVPGVQC*HQKQNS
Trigger: TGAATTTTGTTTTTGGTGTCAACATTGAACACCGGG...CACCATGCCTTCCCTCCATGTTCCATCACGGCGCCACAATCTGTGTCCCTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGGAGAGTTTGATGGGTaGCTCTGTCTTCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHGEFDG*LCLLHH
Trigger: GTGGTGAAGAAGACAGAGTCACCCATCAAACTCTCC...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAATTCCCCAGCACTGTCTaGGAGCTCATTCGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEFPSTV*ELIRVL
Trigger: AAGGACTCGAATGAGCTCTCAGACAGTGCTGGGGAA...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCACTTTCTGAGCTCTCTTaGGGTCAGCCGAGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPLSELS*GQPSPL
Trigger: AAGAGGACTCGGCTGACCTCAAGAGAGCTCAGAAAG...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATAGCCCTTTATCTTTCTaGGCTCTCTTGAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHSPLSF*ALLRSA
Trigger: GGCTGACCTCAAGAGAGCTCAGAAAGATAAAGGGCT...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp CTCAACCTGGACTCAAGTTACTGTGGTGAGAAACCTCACTGTCCATGGTTAACTCTTCCTCATGAAACGTaGGAGACAGGAAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LNLDSSYCGEKPHCPWLTLPHET*ETGRGR
Trigger: CCTGCCTCTTCCTGTCTCGCACGTTTCATGAGGAAG...AGTTAACCATGGACAGTGAGGTTTCTCACCACAGTAACTTGAGTCCAGGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp TCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGTCACTTCCTCCTCAGTaGGGAATGGAGAGTACTTAT +
Preference number: 4 (lower is better)
Translates to: SLCLQKTQRPQIRVGRELSLPPQ*GMESTY
Trigger: ATAAGTACTCTCCATTCCGCACTGAGGAGGAAGTGA...CAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAGCTTTCTTCACCTCCTaGTCCGCACGGGTCTTGAAA +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEAFFTS*SARVLK
Trigger: TTTCAAGACCCGTGCGGAGCAGGAGGTGAAGAAAGC...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCACCTTGCTACGTGCTCTaGTTTCTTCACCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPPCYVL*FLHLLL
Trigger: GAGCAGGAGGTGAAGAAAGCAGAGCACGTAGCAAGG...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATCCCAGGGGAACCTTCTaGTTTTGTTCAGAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHPRGTF*FCSEAS
Trigger: TGAGGCTTCTGAACAAAAGCAGAAGGTTCCCCTGGG...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGCCTCCAGCTTCTCCTaGTGCTGGCGAATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPASSFS*CWRIFS
Trigger: AGAGAAAATTCGCCAGCAGCAGGAGAAGCTGGAGGC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATCAATTTCTTCAGGTCTaGTTGGGAGCGGATGGGTGT +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHQFLQV*LGADGC
Trigger: ACACCCATCCGCTCCCAAGCAGACCTGAAGAAATTG...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAAAAGATGGTGACAGTTaGTGCACCAGAGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEKDGDS*CTRGAG
Trigger: ACCTGCCCCTCTGGTGCAGCAACTGTCACCATCTTT...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCACCTTCACAACAAATCTaGCCCGCTTGCACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPPSQQI*PACTSP
Trigger: AGGAGAGGTGCAAGCGGGGCAGATTTGTTGTGAAGG...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp GGAAGTACCGTAAACAATTCCGGAGGATCTGGACAAGCAGGTCGATGGTCTCGTTTCATAGCACTCAGCTaGTTCTTGGAGATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: GSTVNNSGGSGQAGRWSRFIALS*FLEMGK
Trigger: TTTCCCCATCTCCAAGAAGCAGCTGAGTGCTATGAA...ACGAGACCATCGACCTGCTTGTCCAGATCCTCCGGAATTGTTTACGGTACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR GCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCGGCTCTGGTAGGAATTaGACAGGTTTTGGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVGSGRN*TGFGAL
Trigger: TAGGGCTCCAAAACCTGTGCAATTCCTACCAGAGCC...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675570.1
ENST00000675779.1
CDS-3UTR GCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAACACCTTTTGCAGGAGTaGCACGATGTTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEHLLQE*HDVGPQ
Trigger: CTGAGGACCAACATCGTGGCACTCCTGCAAAAGGTG...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCATCCTCCTGCACCTTTTaGAGGAGTGCCACGATGTTG +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPSSCTF*RSATML
Trigger: CAACATCGTGGCACTCCTGCAAAAGGTGCAGGAGGA...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp TCTGTGTTGATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCGAAGTCCCCTCCCCCTaGAGCTACAGGGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SVLMSMSVSPYEPPSVILEVPSP*SYRVEG
Trigger: CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTC...GAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACATCAACACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR CCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAACTCAGGTGTTCGCTTaGCCGACTTCCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHETQVFA*PTSQTG
Trigger: TCCAGTTTGGGAAGTCGGCCAAGCGAACACCTGAGT...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCATCCGAGCATTCCAGGTaGGCAGTGGGACTATCACTT +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPSEHSR*AVGLSL
Trigger: AAGTGATAGTCCCACTGCCCACCTGGAATGCTCGGA...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGGTGCCGGTACTCCTTaGCATCAGCAAAGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPGAGTP*HQQSPV
Trigger: AACAGGACTTTGCTGATGCCAAGGAGTACCGGCACC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp CTCAACCTGGACTCAAGTTACTGTGGTGAGAAACCTCACTGTCCATGGTTAACTGGTGCCGGTACTCCTTaGCATCAGCAAAGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LNLDSSYCGEKPHCPWLTGAGTP*HQQSPV
Trigger: AACAGGACTTTGCTGATGCCAAGGAGTACCGGCACC...AGTTAACCATGGACAGTGAGGTTTCTCACCACAGTAACTTGAGTCCAGGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCACAATTCCGGAGGATCTaGACAAGCAGGTCGATGGTC +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPQFRRI*TSRSMV
Trigger: GACCATCGACCTGCTTGTCCAGATCCTCCGGAATTG...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp CCAAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACGAATTGCACAGGTTTTaGAGCCCTACTTCATATTGC +
Preference number: 4 (lower is better)
Translates to: PRLGQSSSRRGQGLSVYYELHRF*SPTSYC
Trigger: GCAATATGAAGTAGGGCTCCAAAACCTGTGCAATTC...GTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
3UTR CAA 72 bp GGAGTCAGCACGGCTCTGGTAGGAATTGCACAGGTTTaGGAGCCCTACTTCATATTGCTTGAAGTACTCCTT +
Preference number: 4 (lower is better)
Translates to: GVSTALVGIAQV*EPYFILLEVLL
Trigger: AAGGAGTACTTCAAGCAATATGAAGTAGGGCTCCAAAACCTGTGCAATTCCTACCAGAGCCGTGCTGACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR TCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGGCTACAGTTGTAGATaGACATGCCATCCAGATCCC +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPGYSCR*TCHPDP
Trigger: GGGATCTGGATGGCATGTTCATCTACAACTGTAGCC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp ATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCTCTCTTCCACCACCAACCCATGAATaGAGTCCCCTCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: MSMSVSPYEPPSVILSLPPPTHE*SPLPLQ
Trigger: CTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGG...TGGAAGAGAGAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR TCA 90 bp GTAGTAGATGAGGTGGTTAGACAGGATCTTTTTCCCTCAAGCTGTTTGGACGCCCTCAAGTTACTGTGGTaGGAAACCTCACTGTCCATG +
Preference number: 4 (lower is better)
Translates to: VVDEVVRQDLFPSSCLDALKLLW*ETSLSM
Trigger: CATGGACAGTGAGGTTTCTCACCACAGTAACTTGAG...GGCGTCCAAACAGCTTGAGGGAAAAAGATCCTGTCTAACCACCTCATCTACTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAATTGGTCTGCACCTTGTaGCCATGGATGAAGATCCTC +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHELVCTL*PWMKIL
Trigger: GAGGATCTTCATCCATGGGCACAAGGTGCAGACCAA...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAGGCTCTGGTAGGAATTaGACAGGTTTTGGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEGSGRN*TGFGAL
Trigger: TAGGGCTCCAAAACCTGTGCAATTCCTACCAGAGCC...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR GCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAATGTCTATGTCCTCCTaGACCTTTTGCAGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPMSMSS*TFCRSA
Trigger: GGCACTCCTGCAAAAGGTGCAGGAGGACATAGACAT...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp TGGGGAAACTTGGAGGCAGGAAGTACCGTAAACAATTCCGGAGGATCTGGACAAATGTCTATGTCCTTTTaGAGGAGTGCCACGATGTTG +
Preference number: 4 (lower is better)
Translates to: WGNLEAGSTVNNSGGSGQMSMSF*RSATML
Trigger: CAACATCGTGGCACTCCTGCAAAAGGACATAGACAT...TTGTCCAGATCCTCCGGAATTGTTTACGGTACTTCCTGCCTCCAAGTTTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CCA 90 bp TCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGGAATCTTCATAAACTaGGTCATCACTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLCLQKTQRPQIRVGRELGIFIN*VITSSS
Trigger: TGAGGAGGAAGTGATGACCCAGTTTATGAAGATTCC...CAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAATGTACTTGTACATCCTaGGCTTGTACAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHECTCTS*ACTGSR
Trigger: CCTGCTGCCTGTACAAGCCCAGGATGTACAAGTACA...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAACAGTGGAAGGTCTGGTaGTCACTTCCAAGGGCAATT +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEQWKVW*SLPRAI
Trigger: AATTGCCCTTGGAAGTGACCACCAGACCTTCCACTG...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAACACTCAGCTGCTTCTTaGAGATGGGGAAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEHSAAS*RWGNLE
Trigger: CTCCAAGTTTCCCCATCTCCAAGAAGCAGCTGAGTG...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp CTCAACCTGGACTCAAGTTACTGTGGTGAGAAACCTCACTGTCCATGGTTAACTTGGCCATTGCTGATCTaGGTTAGGGAGATGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LNLDSSYCGEKPHCPWLTWPLLI*VREMPE
Trigger: TTCTGGCATCTCCCTAACCCAGATCAGCAATGGCCA...AGTTAACCATGGACAGTGAGGTTTCTCACCACAGTAACTTGAGTCCAGGTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp AAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACTCGAGAGTACTTATAGATaGGTTCTGTCTCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: KTWTVFQQKRPGSLSVLLESTYR*VLSQWQ
Trigger: TTGCCATTGAGACAGAACTCATCTATAAGTACTCTC...GAGTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGGTCTTGAAACGGCTTaGCGTGTACTTGTACATCCT +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPGLETA*RVLVHP
Trigger: AGGATGTACAAGTACACGTCAAGCCGTTTCAAGACC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR TCA 90 bp TCTGTGTTGATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCAGGTCGATGGTCTCGTaGTTGGTGCTCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SVLMSMSVSPYEPPSVILRSMVS*LVLRAV
Trigger: CACTGCCCTGAGCACCAATCACGAGACCATCGACCT...GAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACATCAACACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR TCA 90 bp CTTGCCTTTGTCTTTGACCCTGAGAAGTTAAGGGACACAGATTGTGGCGCCGTGGAATTCGTGAGTGGTTaGATTTGTGTGCAGATATTC +
Preference number: 4 (lower is better)
Translates to: LAFVFDPEKLRDTDCGAVEFVSG*ICVQIF
Trigger: GAATATCTGCACACAAATTCAACCACTCACGAATTC...CACGGCGCCACAATCTGTGTCCCTTAACTTCTCAGGGTCAAAGACAAAGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCGCTTCAGTAAGTCTGTaGTCCTTAATGACAGTTAAA +
Preference number: 4 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLASVSL*SLMTVK
Trigger: TTTAACTGTCATTAAGGAGCACAGACTTACTGAAGC...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACAAGAATTCGTGAGTaGTTCTCGGCCTCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPTRIRE*FSASQS
Trigger: ACTTTGGGAGGCCGAGAACCACTCACGAATTCTTGT...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS-3UTR CCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAATTCCCCTCTGGGCGATaGCAATATCCTTCCAATACT +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEFPSGR*QYPSNT
Trigger: AGTATTGGAAGGATATTGCCATCGCCCAGAGGGGAA...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp CTCAACCTGGACTCAAGTTACTGTGGTGAGAAACCTCACTGTCCATGGTTAACTAGCTTCTCCTGCTGCTaGCGAATTTTCTCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LNLDSSYCGEKPHCPWLTSFSCC*RIFSVS
Trigger: ACTGACAGAGAAAATTCGCCAGCAGCAGGAGAAGCT...AGTTAACCATGGACAGTGAGGTTTCTCACCACAGTAACTTGAGTCCAGGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCATTGGTGTCGTGTCTGTaGGCACGTAGTCAAACTTCA +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPLVSCL*ARSQTS
Trigger: TGAAGTTTGACTACGTGCCCACAGACACGACACCAA...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp TCTGTGTTGATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCTGGTGCTCAGGGCAGTaGTGTCAGGCTCAATGCGGA +
Preference number: 4 (lower is better)
Translates to: SVLMSMSVSPYEPPSVILWCSGQ*CQAQCG
Trigger: TCCGCATTGAGCCTGACACCACTGCCCTGAGCACCA...GAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACATCAACACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR CCA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCACCAGACTCTTCCAATaGCCATTAAAGAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLTRLFQ*PLKRKF
Trigger: GAATTTTCTCTTTAATGGCCATTGGAAGAGTCTGGT...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp ATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCTCTCTTCCAGGTGCTCCCCACTTCTaGGCTACCCAATCCCATCTG +
Preference number: 4 (lower is better)
Translates to: MSMSVSPYEPPSVILSLPGAPHF*ATQSHL
Trigger: CAGATGGGATTGGGTAGCCCAGAAGTGGGGAGCACC...TGGAAGAGAGAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675779.1
3UTR CAA 72 bp TTTGAACCACAGGTTAGTGGTACAAAGTCACAGTCCTaGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGA +
Preference number: 4 (lower is better)
Translates to: FEPQVSGTKSQS*CLQKTQRPQIR
Trigger: TCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGACTGTGACTTTGTACCACTAACCTGTGGTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAATATTCAAAGGTTAGCTaGGCTCGATTCAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEYSKVS*ARFRLL
Trigger: CAGCAGTCTGAATCGAGCTCAGCTAACCTTTGAATA...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCCTTTTAGCATTAAGTTaGGATAGCTCAATTCAGACA +
Preference number: 4 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLLLALS*DSSIQT
Trigger: TGTCTGAATTGAGCTATCGCAACTTAATGCTAAAAG...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCATTCATAGCACTCAGCTaGTTCTTGGAGATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPFIALS*FLEMGK
Trigger: TTTCCCCATCTCCAAGAAGCAGCTGAGTGCTATGAA...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR GCA 90 bp CTCAACCTGGACTCAAGTTACTGTGGTGAGAAACCTCACTGTCCATGGTTAACTTTCATAGCACTCAGCTaGTTCTTGGAGATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LNLDSSYCGEKPHCPWLTFIALS*FLEMGK
Trigger: TTTCCCCATCTCCAAGAAGCAGCTGAGTGCTATGAA...AGTTAACCATGGACAGTGAGGTTTCTCACCACAGTAACTTGAGTCCAGGTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp TGGGGAAACTTGGAGGCAGGAAGTACCGTAAACAATTCCGGAGGATCTGGACAAAGCCCTACTTCATATTaGTTGAAGTACTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: WGNLEAGSTVNNSGGSGQSPTSY*LKYSFR
Trigger: TCTGAAGGAGTACTTCAAGCAATATGAAGTAGGGCT...TTGTCCAGATCCTCCGGAATTGTTTACGGTACTTCCTGCCTCCAAGTTTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR GCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATTGGGTGGTTTATGACTaGTCCATCTTCATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHWVVYD*SIFMFF
Trigger: GAAGAACATGAAGATGGAGCAGTCATAAACCACCCA...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGGAAAATATCTATTCTGGTaGCATCAGCATCTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: LCLQKTQRPQIRVGRELGKYLFW*HQHLLH
Trigger: ATGCAAGAGATGCTGATGCCACCAGAATAGATATTT...TCCCAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp CTTGCCTTTGTCTTTGACCCTGAGAAGTTAAGGGACACAGATTGTGGCGCCGTGCATAAATATCTATTCTaGTGGCATCAGCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: LAFVFDPEKLRDTDCGAVHKYLF*WHQHLL
Trigger: CAAGAGATGCTGATGCCACCAGAATAGATATTTATG...CACGGCGCCACAATCTGTGTCCCTTAACTTCTCAGGGTCAAAGACAAAGGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGACGTCTCTGCCATCTaGATATCTCTTGGATTTGAG +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPDVSAI*ISLGFE
Trigger: CTCAAATCCAAGAGATATCCAGATGGCAGAGACGTC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAACCAGTATGGCCAAAGTaGAAAGGTTCTCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEPVWPK*KGSLSF
Trigger: AAAGGACAGAGAACCTTTCCACTTTGGCCATACTGG...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGGACCTCCAGTAAAAATGTaGAACCAATTTGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: LCLQKTQRPQIRVGRELGPPVKM*NQFAFG
Trigger: TCCAAATGCAAATTGGTTCCACATTTTTACTGGAGG...TCCCAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCTTCGTTTTTATGGCTTaGAGGGTTCTCAAACCAGGT +
Preference number: 4 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVFVFMA*RVLKPG
Trigger: ACCTGGTTTGAGAACCCTCCAAGCCATAAAAACGAA...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR TCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCACCAAACAAGAATTCGTaGGTGGTTGAATTTGTGTGC +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPPNKNS*VVEFVC
Trigger: GCACACAAATTCAACCACTCACGAATTCTTGTTTGG...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR TCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGCTCATCATCTGTGTTaGTGTCTATGTCCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPAHHLC*CLCPFA
Trigger: TGCAAAAGGACATAGACATCAACACAGATGATGAGC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445980.5
CDS-3UTR GCA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATAGCCCTACTTCATATTaGTTGAAGTACTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHSPTSY*LKYSFR
Trigger: TCTGAAGGAGTACTTCAAGCAATATGAAGTAGGGCT...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR GCA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCAGCCCTACTTCATATTaGTTGAAGTACTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVSPTSY*LKYSFR
Trigger: TCTGAAGGAGTACTTCAAGCAATATGAAGTAGGGCT...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675570.1
ENST00000675779.1
CDS-3UTR GCA 90 bp ATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCTCTCTTCCAGTCTCCTGCACCTTTTaGAGGAGTGCCACGATGTTG +
Preference number: 4 (lower is better)
Translates to: MSMSVSPYEPPSVILSLPVSCTF*RSATML
Trigger: CAACATCGTGGCACTCCTGCAAAAGGTGCAGGAGAC...TGGAAGAGAGAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR CCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGAATTGCACAGGTTTTaGAGCCCTACTTCATATTGC +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPELHRF*SPTSYC
Trigger: GCAATATGAAGTAGGGCTCCAAAACCTGTGCAATTC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAGAATTGCACAGGTTTTaGAGCCCTACTTCATATTGC +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEELHRF*SPTSYC
Trigger: GCAATATGAAGTAGGGCTCCAAAACCTGTGCAATTC...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR TCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAACTTTCTCATACATTTTaGTCAGTCGGCTACAGTTGT +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHELSHTF*SVGYSC
Trigger: ACAACTGTAGCCGACTGATCAAAATGTATGAGAAAG...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR GCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAAGCCCTACTTCATATTaGTTGAAGTACTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHESPTSY*LKYSFR
Trigger: TCTGAAGGAGTACTTCAAGCAATATGAAGTAGGGCT...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CCA 90 bp TCTGTGTTGATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCCACTCAGCTGCTTCTTaGAGATGGGGAAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: SVLMSMSVSPYEPPSVILHSAAS*RWGNLE
Trigger: CTCCAAGTTTCCCCATCTCCAAGAAGCAGCTGAGTG...GAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACATCAACACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR GCA 90 bp CTCAACCTGGACTCAAGTTACTGTGGTGAGAAACCTCACTGTCCATGGTTAACTGTCCTCTCGTCTTTCTaGATAAATATCTATTCTGGT +
Preference number: 4 (lower is better)
Translates to: LNLDSSYCGEKPHCPWLTVLSSF*INIYSG
Trigger: ACCAGAATAGATATTTATGCAGAAAGACGAGAGGAC...AGTTAACCATGGACAGTGAGGTTTCTCACCACAGTAACTTGAGTCCAGGTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CCA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAAAATATCTATTCTGGTaGCATCAGCATCTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPKYLFW*HQHLLH
Trigger: ATGCAAGAGATGCTGATGCCACCAGAATAGATATTT...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAACATAAATATCTATTCTaGTGGCATCAGCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEHKYLF*WHQHLL
Trigger: CAAGAGATGCTGATGCCACCAGAATAGATATTTATG...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CCA 90 bp CTCAACCTGGACTCAAGTTACTGTGGTGAGAAACCTCACTGTCCATGGTTAACTACAAGAATTCGTGAGTaGTTGAATTTGTGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LNLDSSYCGEKPHCPWLTTRIRE*LNLCAD
Trigger: ATCTGCACACAAATTCAACCACTCACGAATTCTTGT...AGTTAACCATGGACAGTGAGGTTTCTCACCACAGTAACTTGAGTCCAGGTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR GCA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAACTTACGAATTTGTGTaGAGATATTCAAAGGTTAGC +
Preference number: 4 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHETYEFV*RYSKVS
Trigger: GCTAACCTTTGAATATCTGCACACAAATTCGTAAGT...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS-3UTR CCA 90 bp TCTGTGTTGATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCAGCAGGAACCTTCTCTaGCTTGTCTTGTTCATTCTG +
Preference number: 4 (lower is better)
Translates to: SVLMSMSVSPYEPPSVILSRNLL*LVLFIL
Trigger: CAGAATGAACAAGACAAGCCAGAGAAGGTTCCTGCT...GAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACATCAACACAGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR CCA 90 bp TCTGTGTTGATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCCATCTGGGCGTCATGTaGAAAAGAACTTCGTTTTTA +
Preference number: 4 (lower is better)
Translates to: SVLMSMSVSPYEPPSVILHLGVM*KRTSFL
Trigger: TAAAAACGAAGTTCTTTTCCACATGACGCCCAGATG...GAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACATCAACACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS CCA 90 bp GACAACAGCCTCAGCCTCCCAGGCCCTTCCCGGGCCTCGGTCCCGTaGCCGCCTCCCCACGAAGAGGAGCTACTCCCGGCTTCCAAGGAC +
Preference number: 5 (lower is better)
Translates to: DNSLSLPGPSRASVP*PPPHEEELLPASKD
Trigger: GTCCTTGGAAGCCGGGAGTAGCTCCTCTTCGTGGGGAGGCGGCCACGGGACCGAGGCCCGGGAAGGGCCTGGGAGGCTGAGGCTGTTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS CCA 90 bp CCTAGATGTGCTGGCCTCCTCCCGGGCTGCCAAAGCAGGGAGCTTTaGGGTACTGCTGATGACAGGAGCCTTTCGGGGCTGGCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: PRCAGLLPGCQSREL*GTADDRSLSGLAGW
Trigger: CCAGCCAGCCAGCCCCGAAAGGCTCCTGTCATCAGCAGTACCCCAAAGCTCCCTGCTTTGGCAGCCCGGGAGGAGGCCAGCACATCTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS CCA 90 bp CGAAGAGGAGCTACTCCCGGCTTCCAAGGACCGGATCGAGGGCAGTaGCGAGCGCACCACCTGACCGGGCACTACCCGGATCTCACAACT +
Preference number: 5 (lower is better)
Translates to: RRGATPGFQGPDRGQ*RAHHLTGHYPDLTT
Trigger: AGTTGTGAGATCCGGGTAGTGCCCGGTCAGGTGGTGCGCTCGCCACTGCCCTCGATCCGGTCCTTGGAAGCCGGGAGTAGCTCCTCTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGCTTTCCTCGGAGGCCTaGGCCCGGGAGTCAGCACGG +
Preference number: 5 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGLSSEA*ARESAR
Trigger: CCGTGCTGACTCCCGGGCCAAGGCCTCCGAGGAAAG...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
ENST00000675570.1
ENST00000675779.1
CDS-3UTR CAA 90 bp CCTCACTGCCTTTCTCCACCCAGCGGTCTCTTGGTGTCGTGTCTGTGGGCACGTCTTTCCTCGGAGGCCTaGGCCCGGGAGTCAGCACGG +
Preference number: 5 (lower is better)
Translates to: PHCLSPPSGLLVSCLWARLSSEA*ARESAR
Trigger: CCGTGCTGACTCCCGGGCCAAGGCCTCCGAGGAAAG...ACGTGCCCACAGACACGACACCAAGAGACCGCTGGGTGGAGAAAGGCAGTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS GCA 90 bp AGGTCGGGATGCAGTCTTGACGAGAGTGTTGGCAGGCTTTCGGGGTaGCTCAGGTGGCTGGAGCAGCCTAGATGTGCTGGCCTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: RSGCSLDESVGRLSG*LRWLEQPRCAGLLP
Trigger: CGGGAGGAGGCCAGCACATCTAGGCTGCTCCAGCCACCTGAGGCACCCCGAAAGCCTGCCAACACTCTCGTCAAGACTGCATCCCGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS GCA 90 bp GGGCTGCTGGCAGGGAGGCCGGGGATACCTCCTTCGAGGAACCACTaGTCCTCCCTGATTGGGGCATTACCAGCGGTCTCTTGGTGTCGT +
Preference number: 5 (lower is better)
Translates to: GLLAGRPGIPPSRNH*SSLIGALPAVSWCR
Trigger: ACGACACCAAGAGACCGCTGGTAATGCCCCAATCAGGGAGGAGCAGTGGTTCCTCGAAGGAGGTATCCCCGGCCTCCCTGCCAGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675402.1
CDS CCA 90 bp GTCTTGACGAGAGTGTTGGCAGGCTTTCGGGGTGCCTCAGGTGGCTaGAGCAGCCTAGATGTGCTGGCCTCCTCCCGGGCTGCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: VLTRVLAGFRGASGG*SSLDVLASSRAAKA
Trigger: TGCTTTGGCAGCCCGGGAGGAGGCCAGCACATCTAGGCTGCTCCAGCCACCTGAGGCACCCCGAAAGCCTGCCAACACTCTCGTCAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS CCA 90 bp TGCAGTCTTGACGAGAGTGTTGGCAGGCTTTCGGGGTGCCTCAGGTaGCTGGAGCAGCCTAGATGTGCTGGCCTCCTCCCGGGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: CSLDESVGRLSGCLR*LEQPRCAGLLPGCQ
Trigger: TTGGCAGCCCGGGAGGAGGCCAGCACATCTAGGCTGCTCCAGCCACCTGAGGCACCCCGAAAGCCTGCCAACACTCTCGTCAAGACTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS-3UTR CAA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGCTTTCCTCGGAGGCCTaGGCCCGGGAGTCAGCACGG +
Preference number: 5 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVELSSEA*ARESAR
Trigger: CCGTGCTGACTCCCGGGCCAAGGCCTCCGAGGAAAG...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS TCA 90 bp CAGGGAGGCCGGGGATACCTCCTTCGAGGAACCACTGCTCCTCCCTaGTTGGGGCATTACCAGCGGTCTCTTGGTGTCGTGTCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: QGGRGYLLRGTTAPP*LGHYQRSLGVVSVG
Trigger: GCCCACAGACACGACACCAAGAGACCGCTGGTAATGCCCCAATCAGGGAGGAGCAGTGGTTCCTCGAAGGAGGTATCCCCGGCCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675402.1
CDS GCA 90 bp CTCAGGTGGCTGGAGCAGCCTAGATGTGCTGGCCTCCTCCCGGGCTaGCAAAGCAGGGAGCTTTGGGGTACTGCTGATGACAGGAGCCTT +
Preference number: 5 (lower is better)
Translates to: LRWLEQPRCAGLLPG*QSRELWGTADDRSL
Trigger: AAGGCTCCTGTCATCAGCAGTACCCCAAAGCTCCCTGCTTTGGCAGCCCGGGAGGAGGCCAGCACATCTAGGCTGCTCCAGCCACCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS GCA 90 bp GACACACAGCTTATGTCATGTCTGACCCGGGCTCCCAGGATGGGCTaGTGGCAGGGAGGCCGGGGATACCTCCTTCGAGGAACCACTGCT +
Preference number: 5 (lower is better)
Translates to: DTQLMSCLTRAPRMG*WQGGRGYLLRGTTA
Trigger: AGCAGTGGTTCCTCGAAGGAGGTATCCCCGGCCTCCCTGCCAGCAGCCCATCCTGGGAGCCCGGGTCAGACATGACATAAGCTGTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675402.1
CDS CCA 90 bp ACACAGCTTATGTCATGTCTGACCCGGGCTCCCAGGATGGGCTGCTaGCAGGGAGGCCGGGGATACCTCCTTCGAGGAACCACTGCTCCT +
Preference number: 5 (lower is better)
Translates to: TQLMSCLTRAPRMGC*QGGRGYLLRGTTAP
Trigger: AGGAGCAGTGGTTCCTCGAAGGAGGTATCCCCGGCCTCCCTGCCAGCAGCCCATCCTGGGAGCCCGGGTCAGACATGACATAAGCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675402.1
CDS-3UTR CAA 90 bp GGTCGATGGTCTCGTGATTGGTGCTCAGGGCAGTGGTGTCAGGCTCAATGCGGACACCGCACCACATGCTaGCCCACCTCCACGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GRWSRDWCSGQWCQAQCGHRTTC*PTSTAV
Trigger: CACAGCCGTGGAGGTGGGCAAGCATGTGGTGCGGTG...TCCGCATTGAGCCTGACACCACTGCCCTGAGCACCAATCACGAGACCATCGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CAA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGCCACCCAGCGGTCTCTaGGTGTCGTGTCTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGPPSGL*VSCLWA
Trigger: TGCCCACAGACACGACACCAAGAGACCGCTGGGTGG...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000675570.1
CDS-3UTR CAA 90 bp AGGTGCGCAGGCTTTCCTCGGAGGCCTTGGCCCGGGAGTCAGCACGGCTCTGGTGCACTCAGCTGCTTCTaGGAGATGGGGAAACTTGGA +
Preference number: 5 (lower is better)
Translates to: RCAGFPRRPWPGSQHGSGALSCF*EMGKLG
Trigger: TCCAAGTTTCCCCATCTCCAAGAAGCAGCTGAGTGC...ACCAGAGCCGTGCTGACTCCCGGGCCAAGGCCTCCGAGGAAAGCCTGCGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS TCA 90 bp ATGGTGACAGTTGCTGCACCAGAGGGGCAGGTCGGGATGCAGTCTTaGCGAGAGTGTTGGCAGGCTTTCGGGGTGCCTCAGGTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: MVTVAAPEGQVGMQS*RECWQAFGVPQVAG
Trigger: TCCAGCCACCTGAGGCACCCCGAAAGCCTGCCAACACTCTCGTCAAGACTGCATCCCGACCTGCCCCTCTGGTGCAGCAACTGTCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS TCA 90 bp TGGAGAACAGCCGCCTGGGCCGGGACCTTACCCTGGAGTCCCGCGTaGGGTCTCCACCTAGGCGTACTTCTAATGTCCGAGCTTTGCTCT +
Preference number: 5 (lower is better)
Translates to: WRTAAWAGTLPWSPA*GLHLGVLLMSELCS
Trigger: AGAGCAAAGCTCGGACATTAGAAGTACGCCTAGGTGGAGACCTCACGCGGGACTCCAGGGTAAGGTCCCGGCCCAGGCGGCTGTTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS GCA 90 bp TCCTGCACCTTTTGCAGGAGTGCCACGATGTTGGTCCTCAGCTTCTaGAGCTTCTCCTCCGTCTCGCGGAGCTTCCTCTCGGAGGTGCGC +
Preference number: 5 (lower is better)
Translates to: SCTFCRSATMLVLSF*SFSSVSRSFLSEVR
Trigger: GCGCACCTCCGAGAGGAAGCTCCGCGAGACGGAGGAGAAGCTGCAGAAGCTGAGGACCAACATCGTGGCACTCCTGCAAAAGGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675027.1
ENST00000675402.1
ENST00000675601.1
ENST00000675779.1
ENST00000675798.1
ENST00000676215.1
ENST00000676263.1
CDS GCA 90 bp ACCAGGTGGTCCAGCTGCAACAGGAAGGCTGCCGGGCTCACCTCCTaGACCTTTTGCAGGAGTGCCACGATGTTGGTCCTCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: TRWSSCNRKAAGLTS*TFCRSATMLVLSFC
Trigger: GCAGAAGCTGAGGACCAACATCGTGGCACTCCTGCAAAAGGTGCAGGAGGTGAGCCCGGCAGCCTTCCTGTTGCAGCTGGACCACCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS GCA 90 bp CCACTGTTCTCGGGATCAAACCCCACAACTTTCAAGCCCTGCCTCTaGCCCTACCGCCCCCAAGTCCCTGCTCAGGCCTCAAGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: PLFSGSNPTTFKPCL*PYRPQVPAQASSPA
Trigger: AGCAGGACTTGAGGCCTGAGCAGGGACTTGGGGGCGGTAGGGGCAGAGGCAGGGCTTGAAAGTTGTGGGGTTTGATCCCGAGAACAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS CCA 90 bp GAGGCCGGGGATACCTCCTTCGAGGAACCACTGCTCCTCCCTGATTaGGGCATTACCAGCGGTCTCTTGGTGTCGTGTCTGTGGGCACGT +
Preference number: 5 (lower is better)
Translates to: EAGDTSFEEPLLLPD*GITSGLLVSCLWAR
Trigger: ACGTGCCCACAGACACGACACCAAGAGACCGCTGGTAATGCCCCAATCAGGGAGGAGCAGTGGTTCCTCGAAGGAGGTATCCCCGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675402.1
CDS-3UTR CAA 90 bp GCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGTCTAATGTCCGAGCTTaGCTCTCTGCCTCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: ALPLELLQDGTGLAVILRSNVRA*LSASRA
Trigger: GGCGCGGGAGGCAGAGAGCAAAGCTCGGACATTAGA...CCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTCCACCCAGCGGTCTCTaGGTGTCGTGTCTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVPPSGL*VSCLWA
Trigger: TGCCCACAGACACGACACCAAGAGACCGCTGGGTGG...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TTCTGCAGCTTCTCCTCCGTCTCGCGGAGCTTCCTCTCGGAGGTGCGCAGGCTTCTCCCCGCCCTCCTGTaGTGTATCAAGGCTCTGATG +
Preference number: 5 (lower is better)
Translates to: FCSFSSVSRSFLSEVRRLLPALL*CIKALM
Trigger: CATCAGAGCCTTGATACACAACAGGAGGGCGGGGAG...AAGCCTGCGCACCTCCGAGAGGAAGCTCCGCGAGACGGAGGAGAAGCTGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CAA 90 bp AGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCTTCCTTTCCTCGGAGGCCTaGGCCCGGGAGTCAGCACGG +
Preference number: 5 (lower is better)
Translates to: SGEKTSHSSVACIPHLCFLSSEA*ARESAR
Trigger: CCGTGCTGACTCCCGGGCCAAGGCCTCCGAGGAAAG...GAAGCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGGAGCAGGGTGGCCATaGCTGATCTGGGTTAGGGAG +
Preference number: 5 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRGAGWP*LIWVRE
Trigger: CTCCCTAACCCAGATCAGCAATGGCCACCCTGCTCC...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS TCA 90 bp TCCACAGGACAGGCACAGAGCAGGCCCTCATGCTTATTGCCTGGATaGAGGGCCAACAGGCTAAGGGGTGCTCCCCACTTCTGGGCTACC +
Preference number: 5 (lower is better)
Translates to: STGQAQSRPSCLLPG*RANRLRGAPHFWAT
Trigger: GGTAGCCCAGAAGTGGGGAGCACCCCTTAGCCTGTTGGCCCTTCATCCAGGCAATAAGCATGAGGGCCTGCTCTGTGCCTGTCCTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675027.1
ENST00000675779.1
CDS GCA 90 bp TCCAGCTGCAACAGGAAGGCTGCCGGGCTCACCTCCTGCACCTTTTaGAGGAGTGCCACGATGTTGGTCCTCAGCTTCTGCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SSCNRKAAGLTSCTF*RSATMLVLSFCSFS
Trigger: GGAGAAGCTGCAGAAGCTGAGGACCAACATCGTGGCACTCCTGCAAAAGGTGCAGGAGGTGAGCCCGGCAGCCTTCCTGTTGCAGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS-3UTR CAA 90 bp AGGAGAAAAGTCAGCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCGGTCGGGATGCAGTCTaGACGAGAGTGTTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: RRKVSPAPGASPRWHWTRGRDAV*TRVLAG
Trigger: GCCTGCCAACACTCTCGTCAAGACTGCATCCCGACC...GCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGCTGACTTTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGAGGAGTGCCACGATGTaGGTCCTCAGCTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRRSATM*VLSFCS
Trigger: GCTGCAGAAGCTGAGGACCAACATCGTGGCACTCCT...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CAA 90 bp GCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGGGCTGTCCAGATCAATaGGCACCATCCAAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: ALPLELLQDGTGLAVILRGCPDQ*APSKAL
Trigger: CAGGGCCTTGGATGGTGCCAATTGATCTGGACAGCC...CCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS TCA 90 bp CTGAGCTCTCTTGAGGTCAGCCGAGTCCTCTTCCCCAGCACTGTCTaGGAGCTGCGTGGAGAGCAGTCTATTAGAGGCATCCCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: LSSLEVSRVLFPSTV*ELRGEQSIRGIPSA
Trigger: GGCACTGGGGATGCCTCTAATAGACTGCTCTCCACGCAGCTCTCAGACAGTGCTGGGGAAGAGGACTCGGCTGACCTCAAGAGAGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675798.1
CDS GCA 90 bp GGCGATGGCAATATCCTTCCAATACTGCGCCAGGTGCTCCCCCATTaGTCGGAGCAGGTGCCGGTACTCCTTGGCATCAGCAAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: GDGNILPILRQVLPH*SEQVPVLLGISKVL
Trigger: CAGGACTTTGCTGATGCCAAGGAGTACCGGCACCTGCTCCGAGCAATGGGGGAGCACCTGGCGCAGTATTGGAAGGATATTGCCATCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675601.1
ENST00000676215.1
CDS GCA 90 bp ATTCCCCTCTGGGCGATGGCAATATCCTTCCAATACTGCGCCAGGTaGTCCCCCATTGCTCGGAGCAGGTGCCGGTACTCCTTGGCATCA +
Preference number: 5 (lower is better)
Translates to: IPLWAMAISFQYCAR*SPIARSRCRYSLAS
Trigger: TGATGCCAAGGAGTACCGGCACCTGCTCCGAGCAATGGGGGAGCACCTGGCGCAGTATTGGAAGGATATTGCCATCGCCCAGAGGGGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675601.1
ENST00000676215.1
CDS GCA 90 bp ACCTCCCGAGGGCTCTTGGAGTTGGGCAGTAAAGATGGTGACAGTTaGTGCACCAGAGGGGCAGGTCGGGATGCAGTCTTGACGAGAGTG +
Preference number: 5 (lower is better)
Translates to: TSRGLLELGSKDGDS*CTRGAGRDAVLTRV
Trigger: CACTCTCGTCAAGACTGCATCCCGACCTGCCCCTCTGGTGCAGCAACTGTCACCATCTTTACTGCCCAACTCCAAGAGCCCTCGGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS GCA 90 bp GCTGAGGACCAGGCAGCCACACCATCTCAAGCCCTCCTGCCAGGGTaGTGTGCAGCCAGGGTGAGAACCATAGATTCCTGTGAGTGGATA +
Preference number: 5 (lower is better)
Translates to: AEDQAATPSQALLPG*CAARVRTIDSCEWI
Trigger: TATCCACTCACAGGAATCTATGGTTCTCACCCTGGCTGCACAGCACCCTGGCAGGAGGGCTTGAGATGGTGTGGCTGCCTGGTCCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS GCA 90 bp GCCCTCATGCTTATTGCCTGGATGAAGGGCCAACAGGCTAAGGGGTaGTCCCCACTTCTGGGCTACCCAATCCCATCTGGGCGTCATGTG +
Preference number: 5 (lower is better)
Translates to: ALMLIAWMKGQQAKG*SPLLGYPIPSGRHV
Trigger: CACATGACGCCCAGATGGGATTGGGTAGCCCAGAAGTGGGGAGCACCCCTTAGCCTGTTGGCCCTTCATCCAGGCAATAAGCATGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675027.1
ENST00000675779.1
CDS CCA 90 bp TGTATCCACAGGACAGGCACAGAGCAGGCCCTCATGCTTATTGCCTaGATGAAGGGCCAACAGGCTAAGGGGTGCTCCCCACTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: CIHRTGTEQALMLIA*MKGQQAKGCSPLLG
Trigger: GCCCAGAAGTGGGGAGCACCCCTTAGCCTGTTGGCCCTTCATCCAGGCAATAAGCATGAGGGCCTGCTCTGTGCCTGTCCTGTGGATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675027.1
ENST00000675779.1
CDS-3UTR CAA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGACTCAGGTGTTCGCTaGGCCGACTTCCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVDSGVR*ADFPNW
Trigger: CCAGTTTGGGAAGTCGGCCAAGCGAACACCTGAGTC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGCGCTGCTTGGCCTCCTaGATCCTCTTCTTGACATCG +
Preference number: 5 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRRCLAS*ILFLTS
Trigger: CGATGTCAAGAAGAGGATCAAGGAGGCCAAGCAGCG...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGACCTCCCGAGGGCTCTaGGAGTTGGGCAGTAAAGAT +
Preference number: 5 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRTSRGL*ELGSKD
Trigger: ATCTTTACTGCCCAACTCCAAGAGCCCTCGGGAGGT...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGTAGCCGGGGAGAGTTaGATGGGTGACTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGVAGES*MGDSVF
Trigger: GAAGACAGAGTCACCCATCAAACTCTCCCCGGCTAC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTACAAATCTGCCCCGCTaGCACCTCTCCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVTNLPR*HLSFLL
Trigger: GAGGAGGAAGGAGAGGTGCAAGCGGGGCAGATTTGT...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGACAAATCTGCCCCGCTaGCACCTCTCCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVETNLPR*HLSFLL
Trigger: GAGGAGGAAGGAGAGGTGCAAGCGGGGCAGATTTGT...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp CTCCTCCTCCCCGCCCTCCTGTTGTGTATCAAGGCTCTGATGTTCCGGAGAAGGACAAATCTGCCCCGCTaGCACCTCTCCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LLLPALLLCIKALMFRRRTNLPR*HLSFLL
Trigger: GAGGAGGAAGGAGAGGTGCAAGCGGGGCAGATTTGT...CCTTCTCCGGAACATCAGAGCCTTGATACACAACAGGAGGGCGGGGAGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CAA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCCACCGCACCACATGCTaGCCCACCTCCACGGCTGTG +
Preference number: 5 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLHRTTC*PTSTAV
Trigger: CACAGCCGTGGAGGTGGGCAAGCATGTGGTGCGGTG...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGCTCCCCGCCCTCCTGTaGTGTATCAAGGCTCTGATG +
Preference number: 5 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVELPALL*CIKALM
Trigger: CATCAGAGCCTTGATACACAACAGGAGGGCGGGGAG...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS GCA 90 bp AACTTGATGATTCCCCTCTGGGCGATGGCAATATCCTTCCAATACTaGGCCAGGTGCTCCCCCATTGCTCGGAGCAGGTGCCGGTACTCC +
Preference number: 5 (lower is better)
Translates to: NLMIPLWAMAISFQY*ARCSPIARSRCRYS
Trigger: GGAGTACCGGCACCTGCTCCGAGCAATGGGGGAGCACCTGGCGCAGTATTGGAAGGATATTGCCATCGCCCAGAGGGGAATCATCAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675601.1
ENST00000676215.1
CDS GCA 90 bp TCCCGAGGGCTCTTGGAGTTGGGCAGTAAAGATGGTGACAGTTGCTaGACCAGAGGGGCAGGTCGGGATGCAGTCTTGACGAGAGTGTTG +
Preference number: 5 (lower is better)
Translates to: SRGLLELGSKDGDSC*TRGAGRDAVLTRVL
Trigger: CAACACTCTCGTCAAGACTGCATCCCGACCTGCCCCTCTGGTGCAGCAACTGTCACCATCTTTACTGCCCAACTCCAAGAGCCCTCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS-3UTR CAA 90 bp TCCAGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCGACTCAGGTGTTCGCTaGGCCGACTTCCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: SSGEKTSHSSVACIPHLCDSGVR*ADFPNW
Trigger: CCAGTTTGGGAAGTCGGCCAAGCGAACACCTGAGTC...GCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp TCCAGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCTGCTCCGCACGGGTCTaGAAACGGCTTGACGTGTAC +
Preference number: 5 (lower is better)
Translates to: SSGEKTSHSSVACIPHLCCSARV*KRLDVY
Trigger: GTACACGTCAAGCCGTTTCAAGACCCGTGCGGAGCA...GCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTAGGTGCCGGTACTCCTaGGCATCAGCAAAGTCCTGT +
Preference number: 5 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVRCRYS*ASAKSC
Trigger: ACAGGACTTTGCTGATGCCAAGGAGTACCGGCACCT...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp AGCCAGGAGCTGAAATGGCTCCGGCTTAGCAACCCAGTATGGCCAAAGTGGAAACCACCCAGCGGTCTCTaGGTGTCGTGTCTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: SQELKWLRLSNPVWPKWKPPSGL*VSCLWA
Trigger: TGCCCACAGACACGACACCAAGAGACCGCTGGGTGG...TTTCCACTTTGGCCATACTGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGCACTCAGCTGCTTCTaGGAGATGGGGAAACTTGGA +
Preference number: 5 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGALSCF*EMGKLG
Trigger: TCCAAGTTTCCCCATCTCCAAGAAGCAGCTGAGTGC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
ENST00000675570.1
ENST00000675779.1
CDS-3UTR CAA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGTCCTCCTGCACCTTTaGCAGGAGTGCCACGATGTT +
Preference number: 5 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVVLLHL*QECHDV
Trigger: AACATCGTGGCACTCCTGCAAAAGGTGCAGGAGGAC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTATATGGCGCAAGTaGCAGCTTCACCACCTCCCA +
Preference number: 5 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRVIWRK*QLHHLP
Trigger: TGGGAGGTGGTGAAGCTGCAACTTGCGCCATATAAC...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS TCA 90 bp GTGATGGCTCTGTTCTGGACCTGTCGCAACATCACCTGCACACATTaGCATCAGGTGAGGGGAGGTGGCACTCTAGGCCACAGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: VMALFWTCRNITCTH*HQVRGGGTLGHSRE
Trigger: TTCCCTGCTGTGGCCTAGAGTGCCACCTCCCCTCACCTGATGTCAATGTGTGCAGGTGATGTTGCGACAGGTCCAGAACAGAGCCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS-3UTR CAA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTTCCTTGATCCTCTTCTaGACATCGGCTTCTCTGCGC +
Preference number: 5 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVSLILF*TSASLR
Trigger: GCGCAGAGAAGCCGATGTCAAGAAGAGGATCAAGGA...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGCAAAGTCCTGTTTGTaGTGTGTAGGCTCCAGGACC +
Preference number: 5 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVAKSCL*CVGSRT
Trigger: GGTCCTGGAGCCTACACACAACAAACAGGACTTTGC...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp CTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAAGTCTTGACGAGAGTGTaGGCAGGCTTTCGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: LLQDGTGLAVILRSQELKVLTRV*AGFRGA
Trigger: GGCACCCCGAAAGCCTGCCAACACTCTCGTCAAGAC...TTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp AGTGGGGCCAGGCCGAAGGGTGGAAGTAGAAAAGCATCAACAGGCTGTCCAGATCTCCCCGCCCTCCTGTaGTGTATCAAGGCTCTGATG +
Preference number: 5 (lower is better)
Translates to: SGARPKGGSRKASTGCPDLPALL*CIKALM
Trigger: CATCAGAGCCTTGATACACAACAGGAGGGCGGGGAG...ATCTGGACAGCCTGTTGATGCTTTTCTACTTCCACCCTTCGGCCTGGCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS TCA 90 bp ACAGGCAGCAGGAGAGCCTCTTGGTCTGCACCTTGTGCCCATGGATaGAGATCCTCATCCGGGGATCAATATAGAGCACAGCGGCATAGG +
Preference number: 5 (lower is better)
Translates to: TGSRRASWSAPCAHG*RSSSGDQYRAQRHR
Trigger: CCTATGCCGCTGTGCTCTATATTGATCCCCGGATGAGGATCTTCATCCATGGGCACAAGGTGCAGACCAAGAGGCTCTCCTGCTGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000675601.1
CDS CCA 90 bp GACAAACTCAAAAGCTGTGTTTTACTTGACCAGGCTCATGGGACATaGGCTCCTAGTGCCAGAAACGCTGGAGAACAGCCGCCTGGGCCG +
Preference number: 5 (lower is better)
Translates to: DKLKSCVLLDQAHGT*APSARNAGEQPPGP
Trigger: CGGCCCAGGCGGCTGTTCTCCAGCGTTTCTGGCACTAGGAGCCCATGTCCCATGAGCCTGGTCAAGTAAAACACAGCTTTTGAGTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS-3UTR CAA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGCAAATTTCTCTACATaGTCTGTGACAGGTTCCCGG +
Preference number: 5 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRANFST*SVTGSR
Trigger: CCGGGAACCTGTCACAGACAATGTAGAGAAATTTGC...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TCCAGTGGGGAAAAGACTTCCCATTCCAGTGTGGCCTGCATCCCTCACCTCTGCCGGCTTGACGTGTACTaGTACATCCTGGGCTTGTAC +
Preference number: 5 (lower is better)
Translates to: SSGEKTSHSSVACIPHLCRLDVY*YILGLY
Trigger: GTACAAGCCCAGGATGTACAAGTACACGTCAAGCCG...GCAGAGGTGAGGGATGCAGGCCACACTGGAATGGGAAGTCTTTTCCCCACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGTCAGCAAAGTCCTGTTaGTTGTGTGTAGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVESAKSC*LCVGSR
Trigger: CCTGGAGCCTACACACAACAAACAGGACTTTGCTGA...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGTTCACCACTGGAGTCTaGATGACTTTGGGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRFTTGV*MTLGEG
Trigger: TCCTTCTCCCAAAGTCATCAAGACTCCAGTGGTGAA...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp AGCCAGGAGCTGAAATGGCTCCGGCTTAGCAACCCAGTATGGCCAAAGTGGAAAAGGAGTGCCACGATGTaGGTCCTCAGCTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SQELKWLRLSNPVWPKWKRSATM*VLSFCS
Trigger: GCTGCAGAAGCTGAGGACCAACATCGTGGCACTCCT...TTTCCACTTTGGCCATACTGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp GTAGTAGATGAGGTGGTTAGACAGGATCTTTTTCCCTCAAGCTGTTTGGACGCCCCCTCTTCAGGCACCTaGATGGGGCTCAGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: VVDEVVRQDLFPSSCLDAPSSGT*MGLSGA
Trigger: GGCCCCACTGAGCCCCATCAAGGTGCCTGAAGAGGG...GGCGTCCAAACAGCTTGAGGGAAAAAGATCCTGTCTAACCACCTCATCTACTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGGATGTCTATGTCCTTTaGCAGGAGTGCCACGATGTT +
Preference number: 5 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGDVYVL*QECHDV
Trigger: AACATCGTGGCACTCCTGCAAAAGGACATAGACATC...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000445980.5
ENST00000675570.1
CDS-3UTR CAA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGCTTCGTTTTTATGGCTaGGAGGGTTCTCAAACCAGG +
Preference number: 5 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGLRFYG*EGSQTR
Trigger: CCTGGTTTGAGAACCCTCCAAGCCATAAAAACGAAG...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS TCA 90 bp TTGCTACGTGCTCTGCTTTCTTCACCTCCTGCTCCGCACGGGTCTTaGAACGGCTTGACGTGTACTTGTACATCCTGGGCTTGTACAGGC +
Preference number: 5 (lower is better)
Translates to: LLRALLSSPPAPHGS*NGLTCTCTSWACTG
Trigger: GCCTGTACAAGCCCAGGATGTACAAGTACACGTCAAGCCGTTTCAAGACCCGTGCGGAGCAGGAGGTGAAGAAAGCAGAGCACGTAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000675601.1
CDS GCA 90 bp AGTGGAAGGTCTGGTGGTCACTTCCAAGGGCAATTTCTTCAGGTCTaGTTGGGAGCGGATGGGTGTGGTTTTCTGAAGGGCCTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: SGRSGGHFQGQFLQV*LGADGCGFLKGLQL
Trigger: AAGCTGGAGGCCCTTCAGAAAACCACACCCATCCGCTCCCAAGCAGACCTGAAGAAATTGCCCTTGGAAGTGACCACCAGACCTTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
CDS GCA 90 bp CTACGTCAGTTTAAAAGATCCAAGGACAGGCCTGGCACTCACCGCTaGTTGGCCTCCTTGATCCTCTTCTTGACATCGGCTTCTCTGCGC +
Preference number: 5 (lower is better)
Translates to: LRQFKRSKDRPGTHR*LASLILFLTSASLR
Trigger: GCGCAGAGAAGCCGATGTCAAGAAGAGGATCAAGGAGGCCAAGCAGCGGTGAGTGCCAGGCCTGTCCTTGGATCTTTTAAACTGACGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS GCA 90 bp CCTCAGATACTACAAATATGCCCACTTCTCTCCCTTCTCTGTCACTaGCCAAGGTCCAGGCCACCACTGTCTCAGACAACTGTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: PQILQICPLLSLLCH*PRSRPPLSQTTVGA
Trigger: GGCTCCCACAGTTGTCTGAGACAGTGGTGGCCTGGACCTTGGGCAGTGACAGAGAAGGGAGAGAAGTGGGCATATTTGTAGTATCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS CCA 90 bp GAGCGCCGCTCTGGCTTCGTGCCCTCTGGGGACGTCTCTGCCATCTaGATATCTCTTGGATTTGAGATTATGTCTAGTTCTGGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: ERRSGFVPSGDVSAI*ISLGFEIMSSSGSP
Trigger: TGGAGAGCCAGAACTAGACATAATCTCAAATCCAAGAGATATCCAGATGGCAGAGACGTCCCCAGAGGGCACGAAGCCAGAGCGGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000675601.1
CDS-3UTR CAA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTTCTCTTCAGCAATCCTaGCTACGTGCTCTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVSLQQS*LRALLS
Trigger: AGAAAGCAGAGCACGTAGCAAGGATTGCTGAAGAGA...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCCGCTGCTTGGCCTCCTaGATCCTCTTCTTGACATCG +
Preference number: 5 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLRCLAS*ILFLTS
Trigger: CGATGTCAAGAAGAGGATCAAGGAGGCCAAGCAGCG...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp CCAAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACAGGTGCCGGTACTCCTaGGCATCAGCAAAGTCCTGT +
Preference number: 5 (lower is better)
Translates to: PRLGQSSSRRGQGLSVYYRCRYS*ASAKSC
Trigger: ACAGGACTTTGCTGATGCCAAGGAGTACCGGCACCT...GTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp AGTGGGGCCAGGCCGAAGGGTGGAAGTAGAAAAGCATCAACAGGCTGTCCAGATGGAGTCTTGATGACTTaGGGAGAAGGAACCTCCCGA +
Preference number: 5 (lower is better)
Translates to: SGARPKGGSRKASTGCPDGVLMT*GEGTSR
Trigger: TCGGGAGGTTCCTTCTCCCAAAGTCATCAAGACTCC...ATCTGGACAGCCTGTTGATGCTTTTCTACTTCCACCCTTCGGCCTGGCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAACACCGCACCACATGCTaGCCCACCTCCACGGCTGTG +
Preference number: 5 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEHRTTC*PTSTAV
Trigger: CACAGCCGTGGAGGTGGGCAAGCATGTGGTGCGGTG...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TCAGGCTCAATGCGGAGGCATTCGGAAGTGGAGGGCTCTGCGACAGCTATGGCCGGAATTGCACAGGTTTaGGAGCCCTACTTCATATTG +
Preference number: 5 (lower is better)
Translates to: SGSMRRHSEVEGSATAMAGIAQV*EPYFIL
Trigger: CAATATGAAGTAGGGCTCCAAAACCTGTGCAATTCC...GGCCATAGCTGTCGCAGAGCCCTCCACTTCCGAATGCCTCCGCATTGAGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CAA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTAGCTCATCATCTGTGTaGATGTCTATGTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVSSSSV*MSMSSC
Trigger: GCAGGAGGACATAGACATCAACACAGATGATGAGCT...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp AGGAGAAAAGTCAGCCCTGCCCCTGGAGCTTCTCCAAGATGGCACTGGACTCGCAAGAAACCCCAAGACTaGGACAGTCTTCCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: RRKVSPAPGASPRWHWTRKKPQD*DSLPAE
Trigger: TTCTGCTGGAAGACTGTCCAAGTCTTGGGGTTTCTT...GCGAGTCCAGTGCCATCTTGGAGAAGCTCCAGGGGCAGGGCTGACTTTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS TCA 90 bp AGAAGTCTTCAGCCAATCACTCTCCAACAAGCAGCCGAGAAACCCTaGGAAACCCTGAACAGCGAGAGAGCCCCTGAGATGTTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: RSLQPITLQQAAEKP*ETLNSERAPEMFAL
Trigger: CAGGGCAAACATCTCAGGGGCTCTCTCGCTGTTCAGGGTTTCTCAGGGTTTCTCGGCTGCTTGTTGGAGAGTGATTGGCTGAAGACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674576.1
CDS GCA 90 bp TTGTACATCCTGGGCTTGTACAGGCAGCAGGAGAGCCTCTTGGTCTaGACCTTGTGCCCATGGATGAAGATCCTCATCCGGGGATCAATA +
Preference number: 5 (lower is better)
Translates to: LYILGLYRQQESLLV*TLCPWMKILIRGSI
Trigger: TATTGATCCCCGGATGAGGATCTTCATCCATGGGCACAAGGTGCAGACCAAGAGGCTCTCCTGCTGCCTGTACAAGCCCAGGATGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000675601.1
CDS GCA 90 bp AGGCTTCTGTCCTGTCTTAATCACTCTCCCCTCCCTCATCTATTGTaGACAGATGATGCCCAGATTTCCTACGCCCACCCTGCCTCTACC +
Preference number: 5 (lower is better)
Translates to: RLLSCLNHSPLPHLL*TDDAQISYAHPAST
Trigger: GGTAGAGGCAGGGTGGGCGTAGGAAATCTGGGCATCATCTGTGCACAATAGATGAGGGAGGGGAGAGTGATTAAGACAGGACAGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS CCA 90 bp CTCTCTTCCACCAGACTGGCAGGCTGTGAGAGCAGGAACCTTCTCTaGCTTGTCTTGTTCATTCTGTATCCACAGGACAGGCACAGAGCA +
Preference number: 5 (lower is better)
Translates to: LSSTRLAGCESRNLL*LVLFILYPQDRHRA
Trigger: TGCTCTGTGCCTGTCCTGTGGATACAGAATGAACAAGACAAGCCAGAGAAGGTTCCTGCTCTCACAGCCTGCCAGTCTGGTGGAAGAGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675027.1
ENST00000675779.1
CDS-3UTR CAA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGAGACCTAAACATCCTTaGCATGTGATCCAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRRPKHP*HVIQER
Trigger: CCTTTCTTGGATCACATGCAAAGGATGTTTAGGTCT...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS-3UTR CAA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTTGGCATCAGCATCTCTaGCATTATCAACCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVWHQHL*HYQPVQ
Trigger: CTGAACTGGTTGATAATGCAAGAGATGCTGATGCCA...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp AGCCAGGAGCTGAAATGGCTCCGGCTTAGCAACCCAGTATGGCCAAAGTGGAAACACTGGCAGCATCACTaGGATCCATTCCTGCTCCAT +
Preference number: 5 (lower is better)
Translates to: SQELKWLRLSNPVWPKWKHWQHH*DPFLLH
Trigger: ATGGAGCAGGAATGGATCCAAGTGATGCTGCCAGTG...TTTCCACTTTGGCCATACTGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGATGGTGTCTTCCTTCTaGGTGAACAGGATAAAATCC +
Preference number: 5 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGMVSSF*VNRIKS
Trigger: GGATTTTATCCTGTTCACCAAGAAGGAAGACACCAT...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp AGCCAGGAGCTGAAATGGCTCCGGCTTAGCAACCCAGTATGGCCAAAGTGGAAACTCTTGGTCTGCACCTaGTGCCCATGGATGAAGATC +
Preference number: 5 (lower is better)
Translates to: SQELKWLRLSNPVWPKWKLLVCT*CPWMKI
Trigger: GATCTTCATCCATGGGCACAAGGTGCAGACCAAGAG...TTTCCACTTTGGCCATACTGGGTTGCTAAGCCGGAGCCATTTCAGCTCCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp GACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGGCCTACTTCATATTGCTaGAAGTACTCCTTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: DHQPMNEVPSPCSYRVEGPTSYC*KYSFRG
Trigger: TCCTCTGAAGGAGTACTTCAAGCAATATGAAGTAGG...CCCCTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
ENST00000675570.1
ENST00000675779.1
CDS-3UTR CAA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGAGCCCTACTTCATATaGCTTGAAGTACTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEEPYFI*LEVLLQ
Trigger: CTGAAGGAGTACTTCAAGCAATATGAAGTAGGGCTC...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CAA 90 bp CTCCTCCTCCCCGCCCTCCTGTTGTGTATCAAGGCTCTGATGTTCCGGAGAAGGGAGCCCTACTTCATATaGCTTGAAGTACTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: LLLPALLLCIKALMFRRREPYFI*LEVLLQ
Trigger: CTGAAGGAGTACTTCAAGCAATATGAAGTAGGGCTC...CCTTCTCCGGAACATCAGAGCCTTGATACACAACAGGAGGGCGGGGAGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CAA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGGGAATTGCACAGGTTTaGGAGCCCTACTTCATATTG +
Preference number: 5 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVEGIAQV*EPYFIL
Trigger: CAATATGAAGTAGGGCTCCAAAACCTGTGCAATTCC...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CAA 90 bp TCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGTCCTCCTGCACCTTTaGCAGGAGTGCCACGATGTT +
Preference number: 5 (lower is better)
Translates to: SLCLQKTQRPQIRVGRELVLLHL*QECHDV
Trigger: AACATCGTGGCACTCCTGCAAAAGGTGCAGGAGGAC...CAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp GTCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGACTCGCCGTTATCTaGAGGAGCCAGGAGCTGAAA +
Preference number: 5 (lower is better)
Translates to: VLVPSENPEAPNTSGKRVGLAVI*RSQELK
Trigger: TTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCC...AACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCGTTAAGGGACACAGATaGTGGCGCCGTGATGGAACA +
Preference number: 5 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLVKGHR*WRRDGT
Trigger: TGTTCCATCACGGCGCCACAATCTGTGTCCCTTAAC...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp AGTGGGGCCAGGCCGAAGGGTGGAAGTAGAAAAGCATCAACAGGCTGTCCAGATCAGCAACGCTTGCCTTaGTCTTTGACCCTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: SGARPKGGSRKASTGCPDQQRLP*SLTLRS
Trigger: ACTTCTCAGGGTCAAAGACAAAGGCAAGCGTTGCTG...ATCTGGACAGCCTGTTGATGCTTTTCTACTTCCACCCTTCGGCCTGGCCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS TCA 90 bp ATGCGCATTGAGCCCGATTTTAACCCATTCCCGTACTGCCCAATCTaGGTAGACTCAGGTGTTCGCTTGGCCGACTTCCCAAACTGGATC +
Preference number: 5 (lower is better)
Translates to: MRIEPDFNPFPYCPI*VDSGVRLADFPNWI
Trigger: GATCCAGTTTGGGAAGTCGGCCAAGCGAACACCTGAGTCTACTCAGATTGGGCAGTACGGGAATGGGTTAAAATCGGGCTCAATGCGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000476152.2
CDS TCA 90 bp CAGGTGGGCAGTGGGACTATCACTTCATCAATGCCTTCTTCCTCATaGAACGTGCGAGACAGGAAGAGGCAGGTCATGGTGTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: QVGSGTITSSMPSSS*NVRDRKRQVMVSSF
Trigger: GAAGGAAGACACCATGACCTGCCTCTTCCTGTCTCGCACGTTTCATGAGGAAGAAGGCATTGATGAAGTGATAGTCCCACTGCCCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000476152.2
ENST00000675601.1
CDS GCA 90 bp TCCTGCGTCTTCATGTCCTTTCTGAATGTTCCCAGGGGAACCTTCTaGTTTTGTTCAGAAGCCTCACACCGGTCCTGTTCAGGATCAGGG +
Preference number: 5 (lower is better)
Translates to: SCVFMSFLNVPRGTF*FCSEASHRSCSGSG
Trigger: CCCTGATCCTGAACAGGACCGGTGTGAGGCTTCTGAACAAAAGCAGAAGGTTCCCCTGGGAACATTCAGAAAGGACATGAAGACGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675601.1
ENST00000676215.1
CDS GCA 90 bp AAGACCGGAGACCAAGATGTCGACGGAGTGTTATATGGCGCAAGTTaGAGCTTCACCACCTCCCAAGTGAAAAAGCTCCTAGGCACTCAC +
Preference number: 5 (lower is better)
Translates to: KTGDQDVDGVLYGAS*SFTTSQVKKLLGTH
Trigger: GTGAGTGCCTAGGAGCTTTTTCACTTGGGAGGTGGTGAAGCTGCAACTTGCGCCATATAACACTCCGTCGACATCTTGGTCTCCGGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS GCA 90 bp CAGAACTCAGCAATCCTTGCTACGTGCTCTGCTTTCTTCACCTCCTaGTCCGCACGGGTCTTGAAACGGCTTGACGTGTACTTGTACATC +
Preference number: 5 (lower is better)
Translates to: QNSAILATCSAFFTS*SARVLKRLDVYLYI
Trigger: GATGTACAAGTACACGTCAAGCCGTTTCAAGACCCGTGCGGAGCAGGAGGTGAAGAAAGCAGAGCACGTAGCAAGGATTGCTGAGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469915.1
CDS GCA 90 bp TCTGATGTTCCGGAGAAGGGGGTTTCATCAGCCGCACATCCTCACTaGCTTTCTCCACCCTGTGGAAGACACACAGCTTATGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: SDVPEKGVSSAAHPH*LSPPCGRHTAYVMS
Trigger: AGACATGACATAAGCTGTGTGTCTTCCACAGGGTGGAGAAAGGCAGTGAGGATGTGCGGCTGATGAAACCCCCTTCTCCGGAACATCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675402.1
CDS GCA 90 bp AGGGAGTTGGCATGTAGTGAAAGGGGCTGCAAAGGAACTGAACTATaGTTCAGGAGACCAGCCTTGTCCCTGAGTTGTGGACTCAGCCTT +
Preference number: 5 (lower is better)
Translates to: RELACSERGCKGTEL*FRRPALSLSCGLSL
Trigger: AAGGCTGAGTCCACAACTCAGGGACAAGGCTGGTCTCCTGAAGCATAGTTCAGTTCCTTTGCAGCCCCTTTCACTACATGCCAACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674576.1
CDS CCA 90 bp AAACAGGCCCAAGACCGGAGACCAAGATGTCGACGGAGTGTTATATaGCGCAAGTTGCAGCTTCACCACCTCCCAAGTGAAAAAGCTCCT +
Preference number: 5 (lower is better)
Translates to: KQAQDRRPRCRRSVI*RKLQLHHLPSEKAP
Trigger: AGGAGCTTTTTCACTTGGGAGGTGGTGAAGCTGCAACTTGCGCCATATAACACTCCGTCGACATCTTGGTCTCCGGTCTTGGGCCTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTATGGTGTCTTCCTTCTaGGTGAACAGGATAAAATCC +
Preference number: 5 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVMVSSF*VNRIKS
Trigger: GGATTTTATCCTGTTCACCAAGAAGGAAGACACCAT...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAATCTAATGTCCGAGCTTaGCTCTCTGCCTCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHESNVRA*LSASRA
Trigger: GGCGCGGGAGGCAGAGAGCAAAGCTCGGACATTAGA...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp CCAAGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGTCCCGGTGTTCAATGTaGACACCAAAAACAAAATTC +
Preference number: 5 (lower is better)
Translates to: PRCDHQPMNEVPSPCSYRSRCSM*TPKTKF
Trigger: GAATTTTGTTTTTGGTGTCAACATTGAACACCGGGA...CCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCTCAGCAAAGTCCTGTTaGTTGTGTGTAGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLSAKSC*LCVGSR
Trigger: CCTGGAGCCTACACACAACAAACAGGACTTTGCTGA...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGTCTTGACGAGAGTGTaGGCAGGCTTTCGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPVLTRV*AGFRGA
Trigger: GGCACCCCGAAAGCCTGCCAACACTCTCGTCAAGAC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGGTCGGGATGCAGTCTaGACGAGAGTGTTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPGRDAV*TRVLAG
Trigger: GCCTGCCAACACTCTCGTCAAGACTGCATCCCGACC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACTCCAAACAGGCCTCTCCTTCACCACTGGAGTCTaGATGACTTTGGGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: FQQKRPGSLSVLLQTGLSFTTGV*MTLGEG
Trigger: TCCTTCTCCCAAAGTCATCAAGACTCCAGTGGTGAA...GGAGAGGCCTGTTTGGAGTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp AAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACTCGCACTCAGCTGCTTCTaGGAGATGGGGAAACTTGGA +
Preference number: 5 (lower is better)
Translates to: KTWTVFQQKRPGSLSVLLALSCF*EMGKLG
Trigger: TCCAAGTTTCCCCATCTCCAAGAAGCAGCTGAGTGC...GAGTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTCCTACTTCATATTGCTaGAAGTACTCCTTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVPTSYC*KYSFRG
Trigger: TCCTCTGAAGGAGTACTTCAAGCAATATGAAGTAGG...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CAA 90 bp GAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCCTTAGGAGTGCCACGATGTaGGTCCTCAGCTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: EVLNVGVQLIICVDVYVLRSATM*VLSFCS
Trigger: GCTGCAGAAGCTGAGGACCAACATCGTGGCACTCCT...AAGGACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CAA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCAGGAGTGCCACGATGTaGGTCCTCAGCTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVRSATM*VLSFCS
Trigger: GCTGCAGAAGCTGAGGACCAACATCGTGGCACTCCT...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675570.1
ENST00000675779.1
CDS-3UTR CAA 90 bp ACCACTCCCTGTTCACACGCACCTCCACGTGCAGCCCTTTATCTTTCTGAGCTCGATGTCTATGTCCTTTaGCAGGAGTGCCACGATGTT +
Preference number: 5 (lower is better)
Translates to: TTPCSHAPPRAALYLSELDVYVL*QECHDV
Trigger: AACATCGTGGCACTCCTGCAAAAGGACATAGACATC...GAGCTCAGAAAGATAAAGGGCTGCACGTGGAGGTGCGTGTGAACAGGGAGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS GCA 90 bp TTCTCTTCAGCAATCCTTGCTACGTGCTCTGCTTTCTTCACCTCCTaGTCCGCACGGGTCTTGAAACGGCTTGACGTGTACTTGTACATC +
Preference number: 5 (lower is better)
Translates to: FSSAILATCSAFFTS*SARVLKRLDVYLYI
Trigger: GATGTACAAGTACACGTCAAGCCGTTTCAAGACCCGTGCGGAGCAGGAGGTGAAGAAAGCAGAGCACGTAGCAAGGATTGCTGAAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000675601.1
ENST00000676215.1
CDS-3UTR CAA 90 bp CCAAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACGCAAATTTCTCTACATaGTCTGTGACAGGTTCCCGG +
Preference number: 5 (lower is better)
Translates to: PRLGQSSSRRGQGLSVYYANFST*SVTGSR
Trigger: CCGGGAACCTGTCACAGACAATGTAGAGAAATTTGC...GTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTCCATTATCCATGAGTTaGAGATTGAAGATGATCACC +
Preference number: 5 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVPLSMS*RLKMIT
Trigger: GGTGATCATCTTCAATCTCAAACTCATGGATAATGG...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCATGCTCCGCACGGGTCTaGAAACGGCTTGACGTGTAC +
Preference number: 5 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPCSARV*KRLDVY
Trigger: GTACACGTCAAGCCGTTTCAAGACCCGTGCGGAGCA...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCACTCCCCGCCCTCCTGTaGTGTATCAAGGCTCTGATG +
Preference number: 5 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPLPALL*CIKALM
Trigger: CATCAGAGCCTTGATACACAACAGGAGGGCGGGGAG...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CAA 90 bp TCTGTGTTGATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCCTTTCCTCGGAGGCCTaGGCCCGGGAGTCAGCACGG +
Preference number: 5 (lower is better)
Translates to: SVLMSMSVSPYEPPSVILLSSEA*ARESAR
Trigger: CCGTGCTGACTCCCGGGCCAAGGCCTCCGAGGAAAG...GAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACATCAACACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR CAA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAAGGAGTGCCACGATGTaGGTCCTCAGCTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHERSATM*VLSFCS
Trigger: GCTGCAGAAGCTGAGGACCAACATCGTGGCACTCCT...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CAA 90 bp AGTGGGGCCAGGCCGAAGGGTGGAAGTAGAAAAGCATCAACAGGCTGTCCAGATTTCTTCCAGCCTTTTTaGGTTCCCCGAAATTTCCTG +
Preference number: 5 (lower is better)
Translates to: SGARPKGGSRKASTGCPDFFQPF*VPRNFL
Trigger: CAGGAAATTTCGGGGAACCAAAAAAGGCTGGAAGAA...ATCTGGACAGCCTGTTGATGCTTTTCTACTTCCACCCTTCGGCCTGGCCCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCATTTCCCTCAAGCTGTTaGGACGCCACAGCCAGGACC +
Preference number: 5 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPFPSSC*DATART
Trigger: GGTCCTGGCTGTGGCGTCCAAACAGCTTGAGGGAAA...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp CTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAAACAAAGTCACAGTCCTaGTGCCTTCAGAAAACCCAG +
Preference number: 5 (lower is better)
Translates to: LLQDGTGLAVILRSQELKTKSQS*CLQKTQ
Trigger: CTGGGTTTTCTGAAGGCACAAGGACTGTGACTTTGT...TTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS CCA 90 bp TTCCAGTGTCTCCAAATGCCTAAGCCCCTGAACACCCTAGTCAAGTaGCCTCCCCACACTTTACTGTATCTCCTTATGAACCACCATCAG +
Preference number: 5 (lower is better)
Translates to: FQCLQMPKPLNTLVK*PPHTLLYLLMNHHQ
Trigger: CTGATGGTGGTTCATAAGGAGATACAGTAAAGTGTGGGGAGGCCACTTGACTAGGGTGTTCAGGGGCTTAGGCATTTGGAGACACTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS-3UTR CAA 90 bp TGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTGAGAGGATACTTACGAATTaGTGTGCAGATATTCAAAGG +
Preference number: 5 (lower is better)
Translates to: CDHQPMNEVPSPCSYRVERILTN*CADIQR
Trigger: CCTTTGAATATCTGCACACAAATTCGTAAGTATCCT...CTCAACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS-3UTR CAA 90 bp AGGTGCGACCACCAACCCATGAATGAAGTCCCCTCCCCCTGCAGCTACAGGGTTCCAATAGAGCAGTATTaGTTGGATTCCTATAAACAC +
Preference number: 5 (lower is better)
Translates to: RCDHQPMNEVPSPCSYRVPIEQY*LDSYKH
Trigger: GTGTTTATAGGAATCCAACAAATACTGCTCTATTGG...AACCCTGTAGCTGCAGGGGGAGGGGACTTCATTCATGGGTTGGTGGTCGCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS-3UTR CAA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATCTCTTGGTCTGCACCTaGTGCCCATGGATGAAGATC +
Preference number: 5 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHLLVCT*CPWMKI
Trigger: GATCTTCATCCATGGGCACAAGGTGCAGACCAAGAG...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATCGGCTTGACGTGTACTaGTACATCCTGGGCTTGTAC +
Preference number: 5 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHRLDVY*YILGLY
Trigger: GTACAAGCCCAGGATGTACAAGTACACGTCAAGCCG...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGGATCTCTTCAGCAATCCTaGCTACGTGCTCTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: LCLQKTQRPQIRVGRELGSLQQS*LRALLS
Trigger: AGAAAGCAGAGCACGTAGCAAGGATTGCTGAAGAGA...TCCCAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAATTTCTTCAGGTCTGCTaGGGAGCGGATGGGTGTGGT +
Preference number: 5 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEFLQVC*GADGCG
Trigger: ACCACACCCATCCGCTCCCAAGCAGACCTGAAGAAA...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAACCTCCCGAGGGCTCTaGGAGTTGGGCAGTAAAGAT +
Preference number: 5 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHETSRGL*ELGSKD
Trigger: ATCTTTACTGCCCAACTCCAAGAGCCCTCGGGAGGT...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAGTAGCCGGGGAGAGTTaGATGGGTGACTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEVAGES*MGDSVF
Trigger: GAAGACAGAGTCACCCATCAAACTCTCCCCGGCTAC...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TCGTGTCTGTGGGCACGTAGTCAAACTTCACCTTCCACCGCACCACATGCTTGCCCTACTTCATATTGCTaGAAGTACTCCTTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: SCLWARSQTSPSTAPHACPTSYC*KYSFRG
Trigger: TCCTCTGAAGGAGTACTTCAAGCAATATGAAGTAGG...GCAAGCATGTGGTGCGGTGGAAGGTGAAGTTTGACTACGTGCCCACAGACACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS-3UTR CAA 90 bp CCAAGACTTGGACAGTCTTCCAGCAGAAGAGGCCAGGGTCTCTCAGTGTACTACGAGCCCTACTTCATATaGCTTGAAGTACTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: PRLGQSSSRRGQGLSVYYEPYFI*LEVLLQ
Trigger: CTGAAGGAGTACTTCAAGCAATATGAAGTAGGGCTC...GTAGTACACTGAGAGACCCTGGCCTCTTCTGCTGGAAGACTGTCCAAGTCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp CTTCTCCAAGATGGCACTGGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAAGGAATTGCACAGGTTTaGGAGCCCTACTTCATATTG +
Preference number: 5 (lower is better)
Translates to: LLQDGTGLAVILRSQELKGIAQV*EPYFIL
Trigger: CAATATGAAGTAGGGCTCCAAAACCTGTGCAATTCC...TTTCAGCTCCTGGCTCCTCAAGATAACGGCGAGTCCAGTGCCATCTTGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp TTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGGACAGATTACCTCACACTaGGCCCACATAAACACCTCA +
Preference number: 5 (lower is better)
Translates to: LCLQKTQRPQIRVGRELGQITSH*AHINTS
Trigger: TGAGGTGTTTATGTGGGCCAAGTGTGAGGTAATCTG...TCCCAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp CTCTTGGTGTCGTGTCTGTGGGCACGTAGTCAAACTTCACCTTCCACCGCACCAAGCTCATCATCTGTGTaGATGTCTATGTCCTTTTGC +
Preference number: 5 (lower is better)
Translates to: LLVSCLWARSQTSPSTAPSSSSV*MSMSFC
Trigger: GCAAAAGGACATAGACATCAACACAGATGATGAGCT...TGGTGCGGTGGAAGGTGAAGTTTGACTACGTGCCCACAGACACGACACCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675570.1
CDS GCA 90 bp TGCTGCTGGCGAATTTTCTCTGTCAGTTGTTTCTGCTTCTCTTCCTaGGTCTTCATGTCCTTTCTGAATGTTCCCAGGGGAACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: CCWRIFSVSCFCFSS*VFMSFLNVPRGTFC
Trigger: GCAGAAGGTTCCCCTGGGAACATTCAGAAAGGACATGAAGACGCAGGAAGAGAAGCAGAAACAACTGACAGAGAAAATTCGCCAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
CDS GCA 90 bp TCCAGCTTCTCCTGCTGCTGGCGAATTTTCTCTGTCAGTTGTTTCTaGTTCTCTTCCTGCGTCTTCATGTCCTTTCTGAATGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: SSFSCCWRIFSVSCF*FSSCVFMSFLNVPR
Trigger: CCTGGGAACATTCAGAAAGGACATGAAGACGCAGGAAGAGAAGCAGAAACAACTGACAGAGAAAATTCGCCAGCAGCAGGAGAAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
CDS CCA 90 bp TTTGTTCAGAAGCCTCACACCGGTCCTGTTCAGGATCAGGGTTCATaGAGCAAACCCAGGTGTCAGGGTAATCTTTTTCCACAGAACTCA +
Preference number: 5 (lower is better)
Translates to: FVQKPHTGPVQDQGS*SKPRCQGNLFPQNS
Trigger: TGAGTTCTGTGGAAAAAGATTACCCTGACACCTGGGTTTGCTCCATGAACCCTGATCCTGAACAGGACCGGTGTGAGGCTTCTGAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000674576.1
ENST00000675601.1
ENST00000676215.1
CDS-3UTR CAA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAACACTGGCAGCATCACTaGGATCCATTCCTGCTCCAT +
Preference number: 5 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEHWQHH*DPFLLH
Trigger: ATGGAGCAGGAATGGATCCAAGTGATGCTGCCAGTG...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp CTCAACCTGGACTCAAGTTACTGTGGTGAGAAACCTCACTGTCCATGGTTAACTTCCTTGATCCTCTTCTaGACATCGGCTTCTCTGCGC +
Preference number: 5 (lower is better)
Translates to: LNLDSSYCGEKPHCPWLTSLILF*TSASLR
Trigger: GCGCAGAGAAGCCGATGTCAAGAAGAGGATCAAGGA...AGTTAACCATGGACAGTGAGGTTTCTCACCACAGTAACTTGAGTCCAGGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGCAAAGTCCTGTTTGTaGTGTGTAGGCTCCAGGACC +
Preference number: 5 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPAKSCL*CVGSRT
Trigger: GGTCCTGGAGCCTACACACAACAAACAGGACTTTGC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGGAGTCTTGATGACTTaGGGAGAAGGAACCTCCCGA +
Preference number: 5 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPGVLMT*GEGTSR
Trigger: TCGGGAGGTTCCTTCTCCCAAAGTCATCAAGACTCC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGCACTCAGCTGCTTCTaGGAGATGGGGAAACTTGGA +
Preference number: 5 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPALSCF*EMGKLG
Trigger: TCCAAGTTTCCCCATCTCCAAGAAGCAGCTGAGTGC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CAA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAGCACTCAGCTGCTTCTaGGAGATGGGGAAACTTGGA +
Preference number: 5 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEALSCF*EMGKLG
Trigger: TCCAAGTTTCCCCATCTCCAAGAAGCAGCTGAGTGC...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CAA 90 bp GAGGAATCACCAGCTCAAGAAACCCCAAGACTTGGACAGTCTTCCAGCAGAAGAAGCTCATCATCTGTGTaGATGTCTATGTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: EESPAQETPRLGQSSSRRSSSSV*MSMSSC
Trigger: GCAGGAGGACATAGACATCAACACAGATGATGAGCT...TCTTCTGCTGGAAGACTGTCCAAGTCTTGGGGTTTCTTGAGCTGGTGATTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp TTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGGAAAAATTCAGCAACGCTaGCCTTTGTCTTTGACCCTG +
Preference number: 5 (lower is better)
Translates to: LCLQKTQRPQIRVGRELGKIQQR*PLSLTL
Trigger: CAGGGTCAAAGACAAAGGCAAGCGTTGCTGAATTTT...TCCCAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCGGTTCTCAAACCAGGTaGTACGTCGGAATGTCTCCT +
Preference number: 5 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVGSQTR*YVGMSP
Trigger: AGGAGACATTCCGACGTACAACCTGGTTTGAGAACC...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS TCA 90 bp CTGTCAGTTGTTTCTGCTTCTCTTCCTGCGTCTTCATGTCCTTTCTaGATGTTCCCAGGGGAACCTTCTGCTTTTGTTCAGAAGCCTCAC +
Preference number: 5 (lower is better)
Translates to: LSVVSASLPASSCPF*MFPGEPSAFVQKPH
Trigger: GTGAGGCTTCTGAACAAAAGCAGAAGGTTCCCCTGGGAACATTCAGAAAGGACATGAAGACGCAGGAAGAGAAGCAGAAACAACTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
CDS-3UTR CAA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCACCTTCCCAATGCGCATaGAGCCCGATTTTAACCCAT +
Preference number: 5 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPPSQCA*SPILTH
Trigger: ATGGGTTAAAATCGGGCTCAATGCGCATTGGGAAGG...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TGCTGCCCAAGTCAGAGATTTACCACAGATCTGTCTCCCCCTCAACCTGGACTCTCCCGGTGTTCAATGTaGACACCAAAAACAAAATTC +
Preference number: 5 (lower is better)
Translates to: CCPSQRFTTDLSPPQPGLSRCSM*TPKTKF
Trigger: GAATTTTGTTTTTGGTGTCAACATTGAACACCGGGA...GAGTCCAGGTTGAGGGGGAGACAGATCTGTGGTAAATCTCTGACTTGGGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp TTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGGACGTGAGTGGTTGAATTaGTGTGCAGATATTCAAAGG +
Preference number: 5 (lower is better)
Translates to: LCLQKTQRPQIRVGRELGREWLN*CADIQR
Trigger: CCTTTGAATATCTGCACACAAATTCAACCACTCACG...TCCCAACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATTGGCATCAGCATCTCTaGCATTATCAACCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHWHQHL*HYQPVQ
Trigger: CTGAACTGGTTGATAATGCAAGAGATGCTGATGCCA...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp GTCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTACTTTCTCATACATTTaGATCAGTCGGCTACAGTTG +
Preference number: 5 (lower is better)
Translates to: VLVPSENPEAPNTSGKRVTFSYI*ISRLQL
Trigger: CAACTGTAGCCGACTGATCAAAATGTATGAGAAAGT...AACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCGGAACCTTCTCTGGCTaGTCTTGTTCATTCTGTATC +
Preference number: 5 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVGTFSG*SCSFCI
Trigger: GATACAGAATGAACAAGACAAGCCAGAGAAGGTTCC...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS CCA 90 bp AACCCAGAAGAGAACATGGTAAGAAATGCAAAGGTTCAAAACTCTTaGTCATCCCTCCTGGATCCACAGTACTGGACACGAAGTGTGTAC +
Preference number: 5 (lower is better)
Translates to: NPEENMVRNAKVQNS*SSLLDPQYWTRSVY
Trigger: GTACACACTTCGTGTCCAGTACTGTGGATCCAGGAGGGATGACCAAGAGTTTTGAACCTTTGCATTTCTTACCATGTTCTCTTCTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674576.1
CDS-3UTR CAA 90 bp GTCCTTGTGCCTTCAGAAAACCCAGAGGCCCCAAATACGAGTGGGAAGAGAGTTGGATATCTCTTGGATTaGAGATTATGTCTAGTTCTG +
Preference number: 5 (lower is better)
Translates to: VLVPSENPEAPNTSGKRVGYLLD*RLCLVL
Trigger: CAGAACTAGACATAATCTCAAATCCAAGAGATATCC...AACTCTCTTCCCACTCGTATTTGGGGCCTCTGGGTTTTCTGAAGGCACAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGAGCCCTACTTCATATaGCTTGAAGTACTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPEPYFI*LEVLLQ
Trigger: CTGAAGGAGTACTTCAAGCAATATGAAGTAGGGCTC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CAA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAGGAATTGCACAGGTTTaGGAGCCCTACTTCATATTG +
Preference number: 5 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHEGIAQV*EPYFIL
Trigger: CAATATGAAGTAGGGCTCCAAAACCTGTGCAATTCC...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS TCA 90 bp AGGAAATTTACCAACGCGGAAATTTACCCACTTCTGTCAGAAAACTaGTCAGCCATGTCTTCGCCACACGTGATGCCAGGATTCTTAAAC +
Preference number: 5 (lower is better)
Translates to: RKFTNAEIYPLLSEN*SAMSSPHVMPGFLN
Trigger: GTTTAAGAATCCTGGCATCACGTGTGGCGAAGACATGGCTGATCAGTTTTCTGACAGAAGTGGGTAAATTTCCGCGTTGGTAAATTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp CCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATCCATTATCCATGAGTTaGAGATTGAAGATGATCACC +
Preference number: 5 (lower is better)
Translates to: PKTQMSRVSQTKVRPPTHPLSMS*RLKMIT
Trigger: GGTGATCATCTTCAATCTCAAACTCATGGATAATGG...ATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCACCTACTTCATATTGCTaGAAGTACTCCTTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPPTSYC*KYSFRG
Trigger: TCCTCTGAAGGAGTACTTCAAGCAATATGAAGTAGG...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000445980.5
CDS-3UTR CAA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAAGCTCATCATCTGTGTaGATGTCTATGTCCTTTTGC +
Preference number: 5 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPSSSSV*MSMSFC
Trigger: GCAAAAGGACATAGACATCAACACAGATGATGAGCT...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445980.5
CDS-3UTR CAA 90 bp TCTGTGTTGATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCTGTCTCCTGCACCTTTaGCAGGAGTGCCACGATGTT +
Preference number: 5 (lower is better)
Translates to: SVLMSMSVSPYEPPSVILCLLHL*QECHDV
Trigger: AACATCGTGGCACTCCTGCAAAAGGTGCAGGAGACA...GAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACATCAACACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR CAA 90 bp GATGAGGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTGATGTCTATGTCAGCTCATCATCTGTGTaGATGTCTATGTCTGTATCT +
Preference number: 5 (lower is better)
Translates to: DEVLNVGVQLIICVDVYVSSSSV*MSMSVS
Trigger: AGATACAGACATAGACATCAACACAGATGATGAGCT...GACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACCTCATC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR CAA 90 bp AAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAACCCATGAAACTTTCTCATACATTTaGATCAGTCGGCTACAGTTG +
Preference number: 5 (lower is better)
Translates to: KTQMSRVSQTKVRPPTHETFSYI*ISRLQL
Trigger: CAACTGTAGCCGACTGATCAAAATGTATGAGAAAGT...TTCATGGGTTGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS CCA 90 bp AGGAATCTTCATAAACTGGGTCATCACTTCCTCCTCAGTGCGGAATaGAGAGTACTTATAGATGAGTTCTGTCTCAATGGCAAATTTCTC +
Preference number: 5 (lower is better)
Translates to: RNLHKLGHHFLLSAE*RVLIDEFCLNGKFL
Trigger: GAGAAATTTGCCATTGAGACAGAACTCATCTATAAGTACTCTCCATTCCGCACTGAGGAGGAAGTGATGACCCAGTTTATGAAGATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000476152.2
ENST00000675601.1
CDS-3UTR CAA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAGGATATCTCTTGGATTaGAGATTATGTCTAGTTCTG +
Preference number: 5 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPGYLLD*RLCLVL
Trigger: CAGAACTAGACATAATCTCAAATCCAAGAGATATCC...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215862.8
ENST00000397641.8
CDS-3UTR CAA 90 bp TTTCCTCCAAAAACACAAATGTCCCGTGTAAGTCAAACCAAGGTGCGACCACCAAGAATTCGTGAGTGGTaGAATTTGTGTGCAGATATT +
Preference number: 5 (lower is better)
Translates to: FPPKTQMSRVSQTKVRPPRIREW*NLCADI
Trigger: AATATCTGCACACAAATTCAACCACTCACGAATTCT...TGGTGGTCGCACCTTGGTTTGACTTACACGGGACATTTGTGTTTTTGGAGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS-3UTR CAA 90 bp ATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCTCTCTTCCAGAGCCCTACTTCATATaGCTTGAAGTACTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: MSMSVSPYEPPSVILSLPEPYFI*LEVLLQ
Trigger: CTGAAGGAGTACTTCAAGCAATATGAAGTAGGGCTC...TGGAAGAGAGAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR CAA 90 bp TCTGTGTTGATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCGGAATTGCACAGGTTTaGGAGCCCTACTTCATATTG +
Preference number: 5 (lower is better)
Translates to: SVLMSMSVSPYEPPSVILGIAQV*EPYFIL
Trigger: CAATATGAAGTAGGGCTCCAAAACCTGTGCAATTCC...GAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACATCAACACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS-3UTR CAA 90 bp TCTGTGTTGATGTCTATGTCTGTATCTCCTTATGAACCACCATCAGTAATTCTCCTTCTCTGGCTTGTCTaGTTCATTCTGTATCCACAG +
Preference number: 5 (lower is better)
Translates to: SVLMSMSVSPYEPPSVILLLWLV*FILYPQ
Trigger: CTGTGGATACAGAATGAACAAGACAAGCCAGAGAAG...GAGAATTACTGATGGTGGTTCATAAGGAGATACAGACATAGACATCAACACAGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS TCA 90 bp ATTTCACTGATCTCAGTTCTTCAATACAGAGCTCAAGATATCCAGTaGCACATTTCACTCCAGTGGGATACATCTCAAAAAGTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: ISLISVLQYRAQDIQ*HISLQWDTSQKVKK
Trigger: CTTTTTCACTTTTTGAGATGTATCCCACTGGAGTGAAATGTGTCACTGGATATCTTGAGCTCTGTATTGAAGAACTGAGATCAGTGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS GCA 90 bp TTGTATCTCTATTTGATGTGTAACCTGTTAGACTTGATATGGACATaGACTGGGCACCAACTCAAAGCATCCCTAATTAAAAACATGAGT +
Preference number: 5 (lower is better)
Translates to: LYLYLMCNLLDLIWT*TGHQLKASLIKNMS
Trigger: ACTCATGTTTTTAATTAGGGATGCTTTGAGTTGGTGCCCAGTGCATGTCCATATCAAGTCTAACAGGTTACACATCAAATAGAGATACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS CCA 90 bp AAAGTTTTGTATCTCTATTTGATGTGTAACCTGTTAGACTTGATATaGACATGCACTGGGCACCAACTCAAAGCATCCCTAATTAAAAAC +
Preference number: 5 (lower is better)
Translates to: KVLYLYLMCNLLDLI*TCTGHQLKASLIKN
Trigger: GTTTTTAATTAGGGATGCTTTGAGTTGGTGCCCAGTGCATGTCCATATCAAGTCTAACAGGTTACACATCAAATAGAGATACAAAACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS TCA 72 bp GCCGCCTGGGCCGGGACCTTACCCTGGAGTCCCGCGTaGGGTCTCCACCTAGGCGTACTTCTAATGTCCGAG +
Preference number: 6 (lower is better)
Translates to: AAWAGTLPWSPA*GLHLGVLLMSE
Trigger: CTCGGACATTAGAAGTACGCCTAGGTGGAGACCTCACGCGGGACTCCAGGGTAAGGTCCCGGCCCAGGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS CCA 72 bp AGAGTGTTGGCAGGCTTTCGGGGTGCCTCAGGTGGCTaGAGCAGCCTAGATGTGCTGGCCTCCTCCCGGGCT +
Preference number: 6 (lower is better)
Translates to: RVLAGFRGASGG*SSLDVLASSRA
Trigger: AGCCCGGGAGGAGGCCAGCACATCTAGGCTGCTCCAGCCACCTGAGGCACCCCGAAAGCCTGCCAACACTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS CCA 72 bp GACGAGAGTGTTGGCAGGCTTTCGGGGTGCCTCAGGTaGCTGGAGCAGCCTAGATGTGCTGGCCTCCTCCCG +
Preference number: 6 (lower is better)
Translates to: DESVGRLSGCLR*LEQPRCAGLLP
Trigger: CGGGAGGAGGCCAGCACATCTAGGCTGCTCCAGCCACCTGAGGCACCCCGAAAGCCTGCCAACACTCTCGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS CCA 72 bp ATGTCATGTCTGACCCGGGCTCCCAGGATGGGCTGCTaGCAGGGAGGCCGGGGATACCTCCTTCGAGGAACC +
Preference number: 6 (lower is better)
Translates to: MSCLTRAPRMGC*QGGRGYLLRGT
Trigger: GGTTCCTCGAAGGAGGTATCCCCGGCCTCCCTGCCAGCAGCCCATCCTGGGAGCCCGGGTCAGACATGACAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675402.1
CDS GCA 72 bp CTTATGTCATGTCTGACCCGGGCTCCCAGGATGGGCTaGTGGCAGGGAGGCCGGGGATACCTCCTTCGAGGA +
Preference number: 6 (lower is better)
Translates to: LMSCLTRAPRMG*WQGGRGYLLRG
Trigger: TCCTCGAAGGAGGTATCCCCGGCCTCCCTGCCAGCAGCCCATCCTGGGAGCCCGGGTCAGACATGACATAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675402.1
CDS GCA 72 bp CAAGCCCTGCCTCTGCCCCTACCGCCCCCAAGTCCCTaGTCAGGCCTCAAGTCCTGCTCTTCTTCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: QALPLPLPPPSP*SGLKSCSSSFC
Trigger: GCAGAAGGAAGAAGAGCAGGACTTGAGGCCTGAGCAGGGACTTGGGGGCGGTAGGGGCAGAGGCAGGGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS CAA 72 bp AGAGGGGCAGGTCGGGATGCAGTCTTGACGAGAGTGTaGGCAGGCTTTCGGGGTGCCTCAGGTGGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: RGAGRDAVLTRV*AGFRGASGGWS
Trigger: GCTCCAGCCACCTGAGGCACCCCGAAAGCCTGCCAACACTCTCGTCAAGACTGCATCCCGACCTGCCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS CAA 90 bp TGCTGCACCAGAGGGGCAGGTCGGGATGCAGTCTTGACGAGAGTGTaGGCAGGCTTTCGGGGTGCCTCAGGTGGCTGGAGCAGCCTAGAT +
Preference number: 6 (lower is better)
Translates to: CCTRGAGRDAVLTRV*AGFRGASGGWSSLD
Trigger: ATCTAGGCTGCTCCAGCCACCTGAGGCACCCCGAAAGCCTGCCAACACTCTCGTCAAGACTGCATCCCGACCTGCCCCTCTGGTGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS CAA 90 bp GATGGTGACAGTTGCTGCACCAGAGGGGCAGGTCGGGATGCAGTCTaGACGAGAGTGTTGGCAGGCTTTCGGGGTGCCTCAGGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: DGDSCCTRGAGRDAV*TRVLAGFRGASGGW
Trigger: CCAGCCACCTGAGGCACCCCGAAAGCCTGCCAACACTCTCGTCAAGACTGCATCCCGACCTGCCCCTCTGGTGCAGCAACTGTCACCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS TCA 72 bp GTTGCTGCACCAGAGGGGCAGGTCGGGATGCAGTCTTaGCGAGAGTGTTGGCAGGCTTTCGGGGTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: VAAPEGQVGMQS*RECWQAFGVPQ
Trigger: CTGAGGCACCCCGAAAGCCTGCCAACACTCTCGTCAAGACTGCATCCCGACCTGCCCCTCTGGTGCAGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS GCA 72 bp CTGGAGCAGCCTAGATGTGCTGGCCTCCTCCCGGGCTaGCAAAGCAGGGAGCTTTGGGGTACTGCTGATGAC +
Preference number: 6 (lower is better)
Translates to: LEQPRCAGLLPG*QSRELWGTADD
Trigger: GTCATCAGCAGTACCCCAAAGCTCCCTGCTTTGGCAGCCCGGGAGGAGGCCAGCACATCTAGGCTGCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS GCA 72 bp GCAGGGAGGCCGGGGATACCTCCTTCGAGGAACCACTaGTCCTCCCTGATTGGGGCATTACCAGCGGTCTCT +
Preference number: 6 (lower is better)
Translates to: AGRPGIPPSRNH*SSLIGALPAVS
Trigger: AGAGACCGCTGGTAATGCCCCAATCAGGGAGGAGCAGTGGTTCCTCGAAGGAGGTATCCCCGGCCTCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675402.1
CDS GCA 72 bp CTGAGAGACCAGGTGGTCCAGCTGCAACAGGAAGGCTaGCGGGCTCACCTCCTGCACCTTTTGCAGGAGTGC +
Preference number: 6 (lower is better)
Translates to: LRDQVVQLQQEG*RAHLLHLLQEC
Trigger: GCACTCCTGCAAAAGGTGCAGGAGGTGAGCCCGGCAGCCTTCCTGTTGCAGCTGGACCACCTGGTCTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS GCA 72 bp TCGGGATCAAACCCCACAACTTTCAAGCCCTGCCTCTaGCCCTACCGCCCCCAAGTCCCTGCTCAGGCCTCA +
Preference number: 6 (lower is better)
Translates to: SGSNPTTFKPCL*PYRPQVPAQAS
Trigger: TGAGGCCTGAGCAGGGACTTGGGGGCGGTAGGGGCAGAGGCAGGGCTTGAAAGTTGTGGGGTTTGATCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS GCA 72 bp GCCTCCCGCGCCTTCTCTTCAGCAATCCTTGCTACGTaGTCTGCTTTCTTCACCTCCTGCTCCGCACGGGTC +
Preference number: 6 (lower is better)
Translates to: ASRAFSSAILAT*SAFFTSCSARV
Trigger: GACCCGTGCGGAGCAGGAGGTGAAGAAAGCAGAGCACGTAGCAAGGATTGCTGAAGAGAAGGCGCGGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000675601.1
ENST00000676215.1
CDS GCA 72 bp TGGGCGATGGCAATATCCTTCCAATACTGCGCCAGGTaGTCCCCCATTGCTCGGAGCAGGTGCCGGTACTCC +
Preference number: 6 (lower is better)
Translates to: WAMAISFQYCAR*SPIARSRCRYS
Trigger: GGAGTACCGGCACCTGCTCCGAGCAATGGGGGAGCACCTGGCGCAGTATTGGAAGGATATTGCCATCGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675601.1
ENST00000676215.1
CDS GCA 72 bp TGCAGTCTTGACGAGAGTGTTGGCAGGCTTTCGGGGTaGCTCAGGTGGCTGGAGCAGCCTAGATGTGCTGGC +
Preference number: 6 (lower is better)
Translates to: CSLDESVGRLSG*LRWLEQPRCAG
Trigger: GCCAGCACATCTAGGCTGCTCCAGCCACCTGAGGCACCCCGAAAGCCTGCCAACACTCTCGTCAAGACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS CCA 72 bp ACTGCTGATGACAGGAGCCTTTCGGGGCTGGCTGGCTaGTCTAGGAGTTGGCAAAGAAGGGGGTCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: TADDRSLSGLAG*SRSWQRRGSAG
Trigger: CCCAGCAGACCCCCTTCTTTGCCAACTCCTAGACCAGCCAGCCAGCCCCGAAAGGCTCCTGTCATCAGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS CAA 72 bp AGTTGCTGCACCAGAGGGGCAGGTCGGGATGCAGTCTaGACGAGAGTGTTGGCAGGCTTTCGGGGTGCCTCA +
Preference number: 6 (lower is better)
Translates to: SCCTRGAGRDAV*TRVLAGFRGAS
Trigger: TGAGGCACCCCGAAAGCCTGCCAACACTCTCGTCAAGACTGCATCCCGACCTGCCCCTCTGGTGCAGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS CAA 90 bp GTCCAGCTGCAACAGGAAGGCTGCCGGGCTCACCTCCTGCACCTTTaGCAGGAGTGCCACGATGTTGGTCCTCAGCTTCTGCAGCTTCTC +
Preference number: 6 (lower is better)
Translates to: VQLQQEGCRAHLLHL*QECHDVGPQLLQLL
Trigger: GAGAAGCTGCAGAAGCTGAGGACCAACATCGTGGCACTCCTGCAAAAGGTGCAGGAGGTGAGCCCGGCAGCCTTCCTGTTGCAGCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS TCA 72 bp CGGGGATACCTCCTTCGAGGAACCACTGCTCCTCCCTaGTTGGGGCATTACCAGCGGTCTCTTGGTGTCGTG +
Preference number: 6 (lower is better)
Translates to: RGYLLRGTTAPP*LGHYQRSLGVV
Trigger: CACGACACCAAGAGACCGCTGGTAATGCCCCAATCAGGGAGGAGCAGTGGTTCCTCGAAGGAGGTATCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675402.1
CDS TCA 72 bp CAGGCACAGAGCAGGCCCTCATGCTTATTGCCTGGATaGAGGGCCAACAGGCTAAGGGGTGCTCCCCACTTC +
Preference number: 6 (lower is better)
Translates to: QAQSRPSCLLPG*RANRLRGAPHF
Trigger: GAAGTGGGGAGCACCCCTTAGCCTGTTGGCCCTTCATCCAGGCAATAAGCATGAGGGCCTGCTCTGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675027.1
ENST00000675779.1
CDS GCA 72 bp ATTCCCCTCTGGGCGATGGCAATATCCTTCCAATACTaGGCCAGGTGCTCCCCCATTGCTCGGAGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: IPLWAMAISFQY*ARCSPIARSRC
Trigger: GCACCTGCTCCGAGCAATGGGGGAGCACCTGGCGCAGTATTGGAAGGATATTGCCATCGCCCAGAGGGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675601.1
ENST00000676215.1
CDS GCA 72 bp AACAGGAAGGCTGCCGGGCTCACCTCCTGCACCTTTTaGAGGAGTGCCACGATGTTGGTCCTCAGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: NRKAAGLTSCTF*RSATMLVLSFC
Trigger: GCAGAAGCTGAGGACCAACATCGTGGCACTCCTGCAAAAGGTGCAGGAGGTGAGCCCGGCAGCCTTCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS GCA 72 bp CAGGCAGCCACACCATCTCAAGCCCTCCTGCCAGGGTaGTGTGCAGCCAGGGTGAGAACCATAGATTCCTGT +
Preference number: 6 (lower is better)
Translates to: QAATPSQALLPG*CAARVRTIDSC
Trigger: ACAGGAATCTATGGTTCTCACCCTGGCTGCACAGCACCCTGGCAGGAGGGCTTGAGATGGTGTGGCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS CAA 72 bp CAACAGGAAGGCTGCCGGGCTCACCTCCTGCACCTTTaGCAGGAGTGCCACGATGTTGGTCCTCAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: QQEGCRAHLLHL*QECHDVGPQLL
Trigger: CAGAAGCTGAGGACCAACATCGTGGCACTCCTGCAAAAGGTGCAGGAGGTGAGCCCGGCAGCCTTCCTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS CAA 90 bp GGGCGATGGCAATATCCTTCCAATACTGCGCCAGGTGCTCCCCCATaGCTCGGAGCAGGTGCCGGTACTCCTTGGCATCAGCAAAGTCCT +
Preference number: 6 (lower is better)
Translates to: GRWQYPSNTAPGAPP*LGAGAGTPWHQQSP
Trigger: AGGACTTTGCTGATGCCAAGGAGTACCGGCACCTGCTCCGAGCAATGGGGGAGCACCTGGCGCAGTATTGGAAGGATATTGCCATCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675601.1
ENST00000676215.1
CDS CAA 90 bp TCCCGCGTGAGGTCTCCACCTAGGCGTACTTCTAATGTCCGAGCTTaGCTCTCTGCCTCCCGCGCCTTCTCTTCAGCAATCCTTGCTACG +
Preference number: 6 (lower is better)
Translates to: SRVRSPPRRTSNVRA*LSASRAFSSAILAT
Trigger: CGTAGCAAGGATTGCTGAAGAGAAGGCGCGGGAGGCAGAGAGCAAAGCTCGGACATTAGAAGTACGCCTAGGTGGAGACCTCACGCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000675601.1
ENST00000676215.1
CDS CAA 90 bp TCCCGCGTGAGGTCTCCACCTAGGCGTACTTCTAATGTCCGAGCTTaGCTCTCTGCCTCCCGCGCCTTCTCTTCAGCTGAAACCCAGAAG +
Preference number: 6 (lower is better)
Translates to: SRVRSPPRRTSNVRA*LSASRAFSSAETQK
Trigger: CTTCTGGGTTTCAGCTGAAGAGAAGGCGCGGGAGGCAGAGAGCAAAGCTCGGACATTAGAAGTACGCCTAGGTGGAGACCTCACGCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674576.1
CDS TCA 72 bp TCTGGACCTGTCGCAACATCACCCTGGAGTCCCGCGTaGGGTCTCCACCTAGGCGTACTTCTAATGTCCGAG +
Preference number: 6 (lower is better)
Translates to: SGPVATSPWSPA*GLHLGVLLMSE
Trigger: CTCGGACATTAGAAGTACGCCTAGGTGGAGACCTCACGCGGGACTCCAGGGTGATGTTGCGACAGGTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000675601.1
CDS GCA 72 bp AATATCCTTCCAATACTGCGCCAGGTGCTCCCCCATTaGTCGGAGCAGGTGCCGGTACTCCTTGGCATCAGC +
Preference number: 6 (lower is better)
Translates to: NILPILRQVLPH*SEQVPVLLGIS
Trigger: GCTGATGCCAAGGAGTACCGGCACCTGCTCCGAGCAATGGGGGAGCACCTGGCGCAGTATTGGAAGGATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675601.1
ENST00000676215.1
CDS GCA 72 bp GGGCTCTTGGAGTTGGGCAGTAAAGATGGTGACAGTTaGTGCACCAGAGGGGCAGGTCGGGATGCAGTCTTG +
Preference number: 6 (lower is better)
Translates to: GLLELGSKDGDS*CTRGAGRDAVL
Trigger: CAAGACTGCATCCCGACCTGCCCCTCTGGTGCAGCAACTGTCACCATCTTTACTGCCCAACTCCAAGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS GCA 72 bp CTTATTGCCTGGATGAAGGGCCAACAGGCTAAGGGGTaGTCCCCACTTCTGGGCTACCCAATCCCATCTGGG +
Preference number: 6 (lower is better)
Translates to: LIAWMKGQQAKG*SPLLGYPIPSG
Trigger: CCCAGATGGGATTGGGTAGCCCAGAAGTGGGGAGCACCCCTTAGCCTGTTGGCCCTTCATCCAGGCAATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675027.1
ENST00000675779.1
CDS CAA 72 bp CAATATCCTTCCAATACTGCGCCAGGTGCTCCCCCATaGCTCGGAGCAGGTGCCGGTACTCCTTGGCATCAG +
Preference number: 6 (lower is better)
Translates to: QYPSNTAPGAPP*LGAGAGTPWHQ
Trigger: CTGATGCCAAGGAGTACCGGCACCTGCTCCGAGCAATGGGGGAGCACCTGGCGCAGTATTGGAAGGATATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675601.1
ENST00000676215.1
CDS CAA 90 bp GCCGGACCAAACCCAGTTCAGGGTGGTGGTCAGATTACCTCACACTaGGCCCACATAAACACCTCACAAATGACCCGCCCACAGCACCTC +
Preference number: 6 (lower is better)
Translates to: AGPNPVQGGGQITSH*AHINTSQMTRPQHL
Trigger: GAGGTGCTGTGGGCGGGTCATTTGTGAGGTGTTTATGTGGGCCAAGTGTGAGGTAATCTGACCACCACCCTGAACTGGGTTTGGTCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS CAA 90 bp AGTGATGGCTCTGTTCTGGACCTGTCGCAACATCACCTGCACACATaGACATCAGGTGAGGGGAGGTGGCACTCTAGGCCACAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: SDGSVLDLSQHHLHT*TSGEGRWHSRPQQG
Trigger: TCCCTGCTGTGGCCTAGAGTGCCACCTCCCCTCACCTGATGTCAATGTGTGCAGGTGATGTTGCGACAGGTCCAGAACAGAGCCATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS TCA 72 bp CTGTTCTGGACCTGTCGCAACATCACCTGCACACATTaGCATCAGGTGAGGGGAGGTGGCACTCTAGGCCAC +
Preference number: 6 (lower is better)
Translates to: LFWTCRNITCTH*HQVRGGGTLGH
Trigger: GTGGCCTAGAGTGCCACCTCCCCTCACCTGATGTCAATGTGTGCAGGTGATGTTGCGACAGGTCCAGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS TCA 72 bp CTTGAGGTCAGCCGAGTCCTCTTCCCCAGCACTGTCTaGGAGCTGCGTGGAGAGCAGTCTATTAGAGGCATC +
Preference number: 6 (lower is better)
Translates to: LEVSRVLFPSTV*ELRGEQSIRGI
Trigger: GATGCCTCTAATAGACTGCTCTCCACGCAGCTCTCAGACAGTGCTGGGGAAGAGGACTCGGCTGACCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675798.1
CDS GCA 72 bp GGTCTCCACCTAGGCGTACTTCTAATGTCCGAGCTTTaGTCTCTGCCTCCCGCGCCTTCTCTTCAGCAATCC +
Preference number: 6 (lower is better)
Translates to: GLHLGVLLMSEL*SLPPAPSLQQS
Trigger: GGATTGCTGAAGAGAAGGCGCGGGAGGCAGAGAGCAAAGCTCGGACATTAGAAGTACGCCTAGGTGGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000675601.1
ENST00000676215.1
CDS CCA 72 bp GATACCTCCTTCGAGGAACCACTGCTCCTCCCTGATTaGGGCATTACCAGCGGTCTCTTGGTGTCGTGTCTG +
Preference number: 6 (lower is better)
Translates to: DTSFEEPLLLPD*GITSGLLVSCL
Trigger: CAGACACGACACCAAGAGACCGCTGGTAATGCCCCAATCAGGGAGGAGCAGTGGTTCCTCGAAGGAGGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675402.1
CDS CAA 90 bp GTGTACTTGTACATCCTGGGCTTGTACAGGCAGCAGGAGAGCCTCTaGGTCTGCACCTTGTGCCCATGGATGAAGATCCTCATCCGGGGA +
Preference number: 6 (lower is better)
Translates to: VYLYILGLYRQQESL*VCTLCPWMKILIRG
Trigger: TCCCCGGATGAGGATCTTCATCCATGGGCACAAGGTGCAGACCAAGAGGCTCTCCTGCTGCCTGTACAAGCCCAGGATGTACAAGTACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000675601.1
CDS CAA 90 bp GTCTTGATGACTTTGGGAGAAGGAACCTCCCGAGGGCTCTTGGAGTaGGGCAGTAAAGATGGTGACAGTTGCTGCACCAGAGGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: VLMTLGEGTSRGLLE*GSKDGDSCCTRGAG
Trigger: ACCTGCCCCTCTGGTGCAGCAACTGTCACCATCTTTACTGCCCAACTCCAAGAGCCCTCGGGAGGTTCCTTCTCCCAAAGTCATCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS CAA 90 bp CTTCCACCAGACTGGCAGGCTGTGAGAGCAGGAACCTTCTCTGGCTaGTCTTGTTCATTCTGTATCCACAGGACAGGCACAGAGCAGGCC +
Preference number: 6 (lower is better)
Translates to: LPPDWQAVRAGTFSG*SCSFCIHRTGTEQA
Trigger: GGCCTGCTCTGTGCCTGTCCTGTGGATACAGAATGAACAAGACAAGCCAGAGAAGGTTCCTGCTCTCACAGCCTGCCAGTCTGGTGGAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675027.1
ENST00000675779.1
CDS TCA 72 bp CTTCACCTCCTGCTCCGCACGGGTCTTGAAACGGCTTaGCGTGTACTTGTACATCCTGGGCTTGTACAGGCA +
Preference number: 6 (lower is better)
Translates to: LHLLLRTGLETA*RVLVHPGLVQA
Trigger: TGCCTGTACAAGCCCAGGATGTACAAGTACACGTCAAGCCGTTTCAAGACCCGTGCGGAGCAGGAGGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000675601.1
CDS TCA 72 bp GCTCTGCTTTCTTCACCTCCTGCTCCGCACGGGTCTTaGAACGGCTTGACGTGTACTTGTACATCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: ALLSSPPAPHGS*NGLTCTCTSWA
Trigger: AGCCCAGGATGTACAAGTACACGTCAAGCCGTTTCAAGACCCGTGCGGAGCAGGAGGTGAAGAAAGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000675601.1
CDS TCA 72 bp CAGCCAATCACTCTCCAACAAGCAGCCGAGAAACCCTaGGAAACCCTGAACAGCGAGAGAGCCCCTGAGATG +
Preference number: 6 (lower is better)
Translates to: QPITLQQAAEKP*ETLNSERAPEM
Trigger: CATCTCAGGGGCTCTCTCGCTGTTCAGGGTTTCTCAGGGTTTCTCGGCTGCTTGTTGGAGAGTGATTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674576.1
CDS GCA 72 bp GCAATCCTTGCTACGTGCTCTGCTTTCTTCACCTCCTaGTCCGCACGGGTCTTGAAACGGCTTGACGTGTAC +
Preference number: 6 (lower is better)
Translates to: AILATCSAFFTS*SARVLKRLDVY
Trigger: GTACACGTCAAGCCGTTTCAAGACCCGTGCGGAGCAGGAGGTGAAGAAAGCAGAGCACGTAGCAAGGATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000675601.1
ENST00000676215.1
CDS GCA 72 bp CCGGAGAAGGGGGTTTCATCAGCCGCACATCCTCACTaGCTTTCTCCACCCTGTGGAAGACACACAGCTTAT +
Preference number: 6 (lower is better)
Translates to: PEKGVSSAAHPH*LSPPCGRHTAY
Trigger: ATAAGCTGTGTGTCTTCCACAGGGTGGAGAAAGGCAGTGAGGATGTGCGGCTGATGAAACCCCCTTCTCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675402.1
CDS GCA 72 bp GGTCTCCACCTAGGCGTACTTCTAATGTCCGAGCTTTaGTCTCTGCCTCCCGCGCCTTCTCTTCAGCTGAAA +
Preference number: 6 (lower is better)
Translates to: GLHLGVLLMSEL*SLPPAPSLQLK
Trigger: TTTCAGCTGAAGAGAAGGCGCGGGAGGCAGAGAGCAAAGCTCGGACATTAGAAGTACGCCTAGGTGGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674576.1
CDS CAA 72 bp TTGTACAGGCAGCAGGAGAGCCTCTTGGTCTGCACCTaGTGCCCATGGATGAAGATCCTCATCCGGGGATCA +
Preference number: 6 (lower is better)
Translates to: LYRQQESLLVCT*CPWMKILIRGS
Trigger: TGATCCCCGGATGAGGATCTTCATCCATGGGCACAAGGTGCAGACCAAGAGGCTCTCCTGCTGCCTGTACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000675601.1
CDS CAA 72 bp TGCTCTGCTTTCTTCACCTCCTGCTCCGCACGGGTCTaGAAACGGCTTGACGTGTACTTGTACATCCTGGGC +
Preference number: 6 (lower is better)
Translates to: CSAFFTSCSARV*KRLDVYLYILG
Trigger: GCCCAGGATGTACAAGTACACGTCAAGCCGTTTCAAGACCCGTGCGGAGCAGGAGGTGAAGAAAGCAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000675601.1
CDS CAA 72 bp AGGTCTCCACCTAGGCGTACTTCTAATGTCCGAGCTTaGCTCTCTGCCTCCCGCGCCTTCTCTTCAGCAATC +
Preference number: 6 (lower is better)
Translates to: RSPPRRTSNVRA*LSASRAFSSAI
Trigger: GATTGCTGAAGAGAAGGCGCGGGAGGCAGAGAGCAAAGCTCGGACATTAGAAGTACGCCTAGGTGGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000675601.1
ENST00000676215.1
CDS CAA 72 bp GGTGGTCACTTCCAAGGGCAATTTCTTCAGGTCTGCTaGGGAGCGGATGGGTGTGGTTTTCTGAAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: GGHFQGQFLQVC*GADGCGFLKGL
Trigger: GAGGCCCTTCAGAAAACCACACCCATCCGCTCCCAAGCAGACCTGAAGAAATTGCCCTTGGAAGTGACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
CDS CAA 72 bp AGGTCTCCACCTAGGCGTACTTCTAATGTCCGAGCTTaGCTCTCTGCCTCCCGCGCCTTCTCTTCAGCTGAA +
Preference number: 6 (lower is better)
Translates to: RSPPRRTSNVRA*LSASRAFSSAE
Trigger: TTCAGCTGAAGAGAAGGCGCGGGAGGCAGAGAGCAAAGCTCGGACATTAGAAGTACGCCTAGGTGGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674576.1
CDS CAA 90 bp CTTGCTACGTGCTCTGCTTTCTTCACCTCCTGCTCCGCACGGGTCTaGAAACGGCTTGACGTGTACTTGTACATCCTGGGCTTGTACAGG +
Preference number: 6 (lower is better)
Translates to: LATCSAFFTSCSARV*KRLDVYLYILGLYR
Trigger: CCTGTACAAGCCCAGGATGTACAAGTACACGTCAAGCCGTTTCAAGACCCGTGCGGAGCAGGAGGTGAAGAAAGCAGAGCACGTAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000675601.1
CDS CAA 90 bp ACTGGAGTCTTGATGACTTTGGGAGAAGGAACCTCCCGAGGGCTCTaGGAGTTGGGCAGTAAAGATGGTGACAGTTGCTGCACCAGAGGG +
Preference number: 6 (lower is better)
Translates to: TGVLMTLGEGTSRGL*ELGSKDGDSCCTRG
Trigger: CCCTCTGGTGCAGCAACTGTCACCATCTTTACTGCCCAACTCCAAGAGCCCTCGGGAGGTTCCTTCTCCCAAAGTCATCAAGACTCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS CAA 90 bp CGTCAGTTTAAAAGATCCAAGGACAGGCCTGGCACTCACCGCTGCTaGGCCTCCTTGATCCTCTTCTTGACATCGGCTTCTCTGCGCAGA +
Preference number: 6 (lower is better)
Translates to: RQFKRSKDRPGTHRC*ASLILFLTSASLRR
Trigger: TCTGCGCAGAGAAGCCGATGTCAAGAAGAGGATCAAGGAGGCCAAGCAGCGGTGAGTGCCAGGCCTGTCCTTGGATCTTTTAAACTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS TCA 72 bp GAGCCCGATTTTAACCCATTCCCGTACTGCCCAATCTaGGTAGACTCAGGTGTTCGCTTGGCCGACTTCCCA +
Preference number: 6 (lower is better)
Translates to: EPDFNPFPYCPI*VDSGVRLADFP
Trigger: TGGGAAGTCGGCCAAGCGAACACCTGAGTCTACTCAGATTGGGCAGTACGGGAATGGGTTAAAATCGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000476152.2
CDS GCA 72 bp TACAGGCAGCAGGAGAGCCTCTTGGTCTGCACCTTGTaGCCATGGATGAAGATCCTCATCCGGGGATCAATA +
Preference number: 6 (lower is better)
Translates to: YRQQESLLVCTL*PWMKILIRGSI
Trigger: TATTGATCCCCGGATGAGGATCTTCATCCATGGGCACAAGGTGCAGACCAAGAGGCTCTCCTGCTGCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000675601.1
CDS GCA 72 bp TCTGGTGGTCACTTCCAAGGGCAATTTCTTCAGGTCTaGTTGGGAGCGGATGGGTGTGGTTTTCTGAAGGGC +
Preference number: 6 (lower is better)
Translates to: SGGHFQGQFLQV*LGADGCGFLKG
Trigger: GCCCTTCAGAAAACCACACCCATCCGCTCCCAAGCAGACCTGAAGAAATTGCCCTTGGAAGTGACCACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
CDS CAA 72 bp ACTTTGGGAGAAGGAACCTCCCGAGGGCTCTTGGAGTaGGGCAGTAAAGATGGTGACAGTTGCTGCACCAGA +
Preference number: 6 (lower is better)
Translates to: TLGEGTSRGLLE*GSKDGDSCCTR
Trigger: TCTGGTGCAGCAACTGTCACCATCTTTACTGCCCAACTCCAAGAGCCCTCGGGAGGTTCCTTCTCCCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000674576.1
ENST00000675317.1
ENST00000675601.1
ENST00000676215.1
ENST00000676263.1
CDS CAA 72 bp AAAAGATCCAAGGACAGGCCTGGCACTCACCGCTGCTaGGCCTCCTTGATCCTCTTCTTGACATCGGCTTCT +
Preference number: 6 (lower is better)
Translates to: KRSKDRPGTHRC*ASLILFLTSAS
Trigger: AGAAGCCGATGTCAAGAAGAGGATCAAGGAGGCCAAGCAGCGGTGAGTGCCAGGCCTGTCCTTGGATCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS CAA 72 bp AGGGAAGAAAAGGTAAGACAGTGCCAAAGGATGGTTTaGGTGCTCGAGCCGAGGTTGTCAGCCCTGCCCTGT +
Preference number: 6 (lower is better)
Translates to: REEKVRQCQRMV*VLEPRLSALPC
Trigger: ACAGGGCAGGGCTGACAACCTCGGCTCGAGCACCAAAACCATCCTTTGGCACTGTCTTACCTTTTCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS CAA 90 bp GTCAGGCTTCTGTCCTGTCTTAATCACTCTCCCCTCCCTCATCTATaGTGCACAGATGATGCCCAGATTTCCTACGCCCACCCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: VRLLSCLNHSPLPHL*CTDDAQISYAHPAS
Trigger: AGAGGCAGGGTGGGCGTAGGAAATCTGGGCATCATCTGTGCACAATAGATGAGGGAGGGGAGAGTGATTAAGACAGGACAGAAGCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS TCA 72 bp AGGAGAGCCTCTTGGTCTGCACCTTGTGCCCATGGATaGAGATCCTCATCCGGGGATCAATATAGAGCACAG +
Preference number: 6 (lower is better)
Translates to: RRASWSAPCAHG*RSSSGDQYRAQ
Trigger: CTGTGCTCTATATTGATCCCCGGATGAGGATCTTCATCCATGGGCACAAGGTGCAGACCAAGAGGCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000675601.1
CDS GCA 72 bp TTTAAAAGATCCAAGGACAGGCCTGGCACTCACCGCTaGTTGGCCTCCTTGATCCTCTTCTTGACATCGGCT +
Preference number: 6 (lower is better)
Translates to: FKRSKDRPGTHR*LASLILFLTSA
Trigger: AGCCGATGTCAAGAAGAGGATCAAGGAGGCCAAGCAGCGGTGAGTGCCAGGCCTGTCCTTGGATCTTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS GCA 72 bp CAAGCAGGTACATGTCTGAGACTGAAAACTGCATCATaGCACACCCCTCCAGTGATCTCCACTGTTCTCGGG +
Preference number: 6 (lower is better)
Translates to: QAGTCLRLKTAS*HTPPVISTVLG
Trigger: CCCGAGAACAGTGGAGATCACTGGAGGGGTGTGGCATGATGCAGTTTTCAGTCTCAGACATGTACCTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS CCA 72 bp GTAGACTCAGGTGTTCGCTTGGCCGACTTCCCAAACTaGATCACACTGGCAGCATCACTTGGATCCATTCCT +
Preference number: 6 (lower is better)
Translates to: VDSGVRLADFPN*ITLAASLGSIP
Trigger: AGGAATGGATCCAAGTGATGCTGCCAGTGTGATCCAGTTTGGGAAGTCGGCCAAGCGAACACCTGAGTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000476152.2
CDS CCA 72 bp CAAGACCGGAGACCAAGATGTCGACGGAGTGTTATATaGCGCAAGTTGCAGCTTCACCACCTCCCAAGTGAA +
Preference number: 6 (lower is better)
Translates to: QDRRPRCRRSVI*RKLQLHHLPSE
Trigger: TTCACTTGGGAGGTGGTGAAGCTGCAACTTGCGCCATATAACACTCCGTCGACATCTTGGTCTCCGGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS CCA 72 bp AAAAGCTGTGTTTTACTTGACCAGGCTCATGGGACATaGGCTCCTAGTGCCAGAAACGCTGGAGAACAGCCG +
Preference number: 6 (lower is better)
Translates to: KSCVLLDQAHGT*APSARNAGEQP
Trigger: CGGCTGTTCTCCAGCGTTTCTGGCACTAGGAGCCCATGTCCCATGAGCCTGGTCAAGTAAAACACAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS CCA 72 bp ACCAGACTGGCAGGCTGTGAGAGCAGGAACCTTCTCTaGCTTGTCTTGTTCATTCTGTATCCACAGGACAGG +
Preference number: 6 (lower is better)
Translates to: TRLAGCESRNLL*LVLFILYPQDR
Trigger: CCTGTCCTGTGGATACAGAATGAACAAGACAAGCCAGAGAAGGTTCCTGCTCTCACAGCCTGCCAGTCTGGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675027.1
ENST00000675779.1
CDS CAA 72 bp AACCCAGTTCAGGGTGGTGGTCAGATTACCTCACACTaGGCCCACATAAACACCTCACAAATGACCCGCCCA +
Preference number: 6 (lower is better)
Translates to: NPVQGGGQITSH*AHINTSQMTRP
Trigger: TGGGCGGGTCATTTGTGAGGTGTTTATGTGGGCCAAGTGTGAGGTAATCTGACCACCACCCTGAACTGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS CAA 72 bp GCAGGCTGTGAGAGCAGGAACCTTCTCTGGCTTGTCTaGTTCATTCTGTATCCACAGGACAGGCACAGAGCA +
Preference number: 6 (lower is better)
Translates to: AGCESRNLLWLV*FILYPQDRHRA
Trigger: TGCTCTGTGCCTGTCCTGTGGATACAGAATGAACAAGACAAGCCAGAGAAGGTTCCTGCTCTCACAGCCTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675027.1
ENST00000675779.1
CDS CAA 72 bp GACTGGCAGGCTGTGAGAGCAGGAACCTTCTCTGGCTaGTCTTGTTCATTCTGTATCCACAGGACAGGCACA +
Preference number: 6 (lower is better)
Translates to: DWQAVRAGTFSG*SCSFCIHRTGT
Trigger: TGTGCCTGTCCTGTGGATACAGAATGAACAAGACAAGCCAGAGAAGGTTCCTGCTCTCACAGCCTGCCAGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675027.1
ENST00000675779.1
CDS CAA 90 bp CAAGACCGGAGACCAAGATGTCGACGGAGTGTTATATGGCGCAAGTaGCAGCTTCACCACCTCCCAAGTGAAAAAGCTCCTAGGCACTCA +
Preference number: 6 (lower is better)
Translates to: QDRRPRCRRSVIWRK*QLHHLPSEKAPRHS
Trigger: TGAGTGCCTAGGAGCTTTTTCACTTGGGAGGTGGTGAAGCTGCAACTTGCGCCATATAACACTCCGTCGACATCTTGGTCTCCGGTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS CAA 90 bp CTTGGCCCGGGAGTCAGCACGGCTCTGGTAGGAATTGCACAGGTTTaGGAGCCCTACTTCATATTGCTTGAAGTACTCCTTCTGTTGGGA +
Preference number: 6 (lower is better)
Translates to: LGPGVSTALVGIAQV*EPYFILLEVLLLLG
Trigger: TCCCAACAGAAGGAGTACTTCAAGCAATATGAAGTAGGGCTCCAAAACCTGTGCAATTCCTACCAGAGCCGTGCTGACTCCCGGGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429468.5
CDS TCA 72 bp GTTCTGTCTCAATGGCAAATTTCTCTACATTGTCTGTaGCAGGTTCCCGGGTCCGAGCATTCCAGGTGGGCA +
Preference number: 6 (lower is better)
Translates to: VLSQWQISLHCL*QVPGSEHSRWA
Trigger: TGCCCACCTGGAATGCTCGGACCCGGGAACCTGTCACAGACAATGTAGAGAAATTTGCCATTGAGACAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000476152.2
ENST00000675601.1
CDS TCA 72 bp TGCCTGTGCCAAGGAGGCCAACAAGAGGCAAAACAGTaGATCAAGCCACAGAGTCCAAAGAGGATCCAGACA +
Preference number: 6 (lower is better)
Translates to: CLCQGGQQEAKQ*IKPQSPKRIQT
Trigger: TGTCTGGATCCTCTTTGGACTCTGTGGCTTGATTCACTGTTTTGCCTCTTGTTGGCCTCCTTGGCACAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS GCA 72 bp TTTTCCACAGAACTCAGCAATCCTTGCTACGTGCTCTaGTTTCTTCACCTCCTGCTCCGCACGGGTCTTGAA +
Preference number: 6 (lower is better)
Translates to: FSTELSNPCYVL*FLHLLLRTGLE
Trigger: TTCAAGACCCGTGCGGAGCAGGAGGTGAAGAAAGCAGAGCACGTAGCAAGGATTGCTGAGTTCTGTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469915.1
CDS GCA 72 bp AATCTTTTTCCACAGAACTCAGCAATCCTTGCTACGTaGTCTGCTTTCTTCACCTCCTGCTCCGCACGGGTC +
Preference number: 6 (lower is better)
Translates to: NLFPQNSAILAT*SAFFTSCSARV
Trigger: GACCCGTGCGGAGCAGGAGGTGAAGAAAGCAGAGCACGTAGCAAGGATTGCTGAGTTCTGTGGAAAAAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469915.1
CDS CCA 72 bp ACCAATGTTCCGCTGTCCCCAGGAATCTTCATAAACTaGGTCATCACTTCCTCCTCAGTGCGGAATGGAGAG +
Preference number: 6 (lower is better)
Translates to: TNVPLSPGIFIN*VITSSSVRNGE
Trigger: CTCTCCATTCCGCACTGAGGAGGAAGTGATGACCCAGTTTATGAAGATTCCTGGGGACAGCGGAACATTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000476152.2
ENST00000675601.1
CDS CCA 72 bp AAGCCTCACACCGGTCCTGTTCAGGATCAGGGTTCATaGAGCAAACCCAGGTGTCAGGGTAATCTTTTTCCA +
Preference number: 6 (lower is better)
Translates to: KPHTGPVQDQGS*SKPRCQGNLFP
Trigger: TGGAAAAAGATTACCCTGACACCTGGGTTTGCTCCATGAACCCTGATCCTGAACAGGACCGGTGTGAGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000674576.1
ENST00000675601.1
ENST00000676215.1
CDS CCA 72 bp CATCACCTGCACACATTGACATCAGGTGAGGGGAGGTaGCACTCTAGGCCACAGCAGGGAATATTGAAACAT +
Preference number: 6 (lower is better)
Translates to: HHLHTLTSGEGR*HSRPQQGILKH
Trigger: ATGTTTCAATATTCCCTGCTGTGGCCTAGAGTGCCACCTCCCCTCACCTGATGTCAATGTGTGCAGGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS CAA 72 bp GTCCTTTCTGAATGTTCCCAGGGGAACCTTCTGCTTTaGTTCAGAAGCCTCACACCGGTCCTGTTCAGGATC +
Preference number: 6 (lower is better)
Translates to: VLSECSQGNLLL*FRSLTPVLFRI
Trigger: GATCCTGAACAGGACCGGTGTGAGGCTTCTGAACAAAAGCAGAAGGTTCCCCTGGGAACATTCAGAAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000674576.1
ENST00000675601.1
ENST00000676215.1
CDS TCA 72 bp AGTGGGACTATCACTTCATCAATGCCTTCTTCCTCATaGAACGTGCGAGACAGGAAGAGGCAGGTCATGGTG +
Preference number: 6 (lower is better)
Translates to: SGTITSSMPSSS*NVRDRKRQVMV
Trigger: CACCATGACCTGCCTCTTCCTGTCTCGCACGTTTCATGAGGAAGAAGGCATTGATGAAGTGATAGTCCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000476152.2
ENST00000675601.1
CDS TCA 72 bp ACCAACGCGGAAATTTACCCACTTCTGTCAGAAAACTaGTCAGCCATGTCTTCGCCACACGTGATGCCAGGA +
Preference number: 6 (lower is better)
Translates to: TNAEIYPLLSEN*SAMSSPHVMPG
Trigger: TCCTGGCATCACGTGTGGCGAAGACATGGCTGATCAGTTTTCTGACAGAAGTGGGTAAATTTCCGCGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS TCA 72 bp GGTCCTCAATGTAGGCGTCCAGCTCATCATCTGTGTTaGTGTCTATGTCCTGGAATAGAGCAGGGTAGGGAT +
Preference number: 6 (lower is better)
Translates to: GPQCRRPAHHLC*CLCPGIEQGRD
Trigger: ATCCCTACCCTGCTCTATTCCAGGACATAGACATCAACACAGATGATGAGCTGGACGCCTACATTGAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS GCA 72 bp GACCAAGATGTCGACGGAGTGTTATATGGCGCAAGTTaGAGCTTCACCACCTCCCAAGTGAAAAAGCTCCTA +
Preference number: 6 (lower is better)
Translates to: DQDVDGVLYGAS*SFTTSQVKKLL
Trigger: TAGGAGCTTTTTCACTTGGGAGGTGGTGAAGCTGCAACTTGCGCCATATAACACTCCGTCGACATCTTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS CCA 72 bp CTCCAAATGCCTAAGCCCCTGAACACCCTAGTCAAGTaGCCTCCCCACACTTTACTGTATCTCCTTATGAAC +
Preference number: 6 (lower is better)
Translates to: LQMPKPLNTLVK*PPHTLLYLLMN
Trigger: GTTCATAAGGAGATACAGTAAAGTGTGGGGAGGCCACTTGACTAGGGTGTTCAGGGGCTTAGGCATTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS CAA 72 bp AGACCAAGATGTCGACGGAGTGTTATATGGCGCAAGTaGCAGCTTCACCACCTCCCAAGTGAAAAAGCTCCT +
Preference number: 6 (lower is better)
Translates to: RPRCRRSVIWRK*QLHHLPSEKAP
Trigger: AGGAGCTTTTTCACTTGGGAGGTGGTGAAGCTGCAACTTGCGCCATATAACACTCCGTCGACATCTTGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397641.8
CDS CAA 72 bp TGCAAAGGAACTGAACTATGCTTCAGGAGACCAGCCTaGTCCCTGAGTTGTGGACTCAGCCTTTTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: CKGTELCFRRPA*SLSCGLSLFLE
Trigger: TTCCAGGAAAAGGCTGAGTCCACAACTCAGGGACAAGGCTGGTCTCCTGAAGCATAGTTCAGTTCCTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674576.1
CDS CAA 90 bp GAAAGAAAAAGGGAAGAAAAGGTAAGACAGTGCCAAAGGATGGTTTaGGTGCTCGAGCCGAGGTTGTCAGCCCTGCCCTGTCTTTATGAC +
Preference number: 6 (lower is better)
Translates to: ERKREEKVRQCQRMV*VLEPRLSALPCLYD
Trigger: GTCATAAAGACAGGGCAGGGCTGACAACCTCGGCTCGAGCACCAAAACCATCCTTTGGCACTGTCTTACCTTTTCTTCCCTTTTTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS GCA 72 bp TTCATGTCCTTTCTGAATGTTCCCAGGGGAACCTTCTaGTTTTGTTCAGAAGCCTCACACCGGTCCTGTTCA +
Preference number: 6 (lower is better)
Translates to: FMSFLNVPRGTF*FCSEASHRSCS
Trigger: TGAACAGGACCGGTGTGAGGCTTCTGAACAAAAGCAGAAGGTTCCCCTGGGAACATTCAGAAAGGACATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000674576.1
ENST00000675601.1
ENST00000676215.1
CDS CCA 72 bp TCTGGCTTCGTGCCCTCTGGGGACGTCTCTGCCATCTaGATATCTCTTGGATTTGAGATTATGTCTAGTTCT +
Preference number: 6 (lower is better)
Translates to: SGFVPSGDVSAI*ISLGFEIMSSS
Trigger: AGAACTAGACATAATCTCAAATCCAAGAGATATCCAGATGGCAGAGACGTCCCCAGAGGGCACGAAGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000675601.1
CDS CAA 72 bp CTTCGTTTTTATGGCTTGGAGGGTTCTCAAACCAGGTaGTACGTCGGAATGTCTCCTGCACCTTTTGCAGGA +
Preference number: 6 (lower is better)
Translates to: LRFYGLEGSQTR*YVGMSPAPFAG
Trigger: TCCTGCAAAAGGTGCAGGAGACATTCCGACGTACAACCTGGTTTGAGAACCCTCCAAGCCATAAAAACGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS CAA 90 bp AATCCCATCTGGGCGTCATGTGGAAAAGAACTTCGTTTTTATGGCTaGGAGGGTTCTCAAACCAGGTTGTACGTCGGAATGTCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: NPIWASCGKELRFYG*EGSQTRLYVGMSPA
Trigger: TGCAGGAGACATTCCGACGTACAACCTGGTTTGAGAACCCTCCAAGCCATAAAAACGAAGTTCTTTTCCACATGACGCCCAGATGGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675779.1
CDS CAA 90 bp AATCCCATCTGGGCGTCATGTGGAAAAGAACTTCGTTTTTATGGCTaGGAGGGTTCTCAAACCAGGTTGTACGTCGGAATGTCTAAAGGG +
Preference number: 6 (lower is better)
Translates to: NPIWASCGKELRFYG*EGSQTRLYVGMSKG
Trigger: CCCTTTAGACATTCCGACGTACAACCTGGTTTGAGAACCCTCCAAGCCATAAAAACGAAGTTCTTTTCCACATGACGCCCAGATGGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS CCA 72 bp GAAATGCAAAGGTTCAAAACTCTTGGTCATCCCTCCTaGATCCACAGTACTGGACACGAAGTGTGTACACCA +
Preference number: 6 (lower is better)
Translates to: EMQRFKTLGHPS*IHSTGHEVCTP
Trigger: TGGTGTACACACTTCGTGTCCAGTACTGTGGATCCAGGAGGGATGACCAAGAGTTTTGAACCTTTGCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674576.1
CDS TCA 72 bp TCAAGTGGCCTCCCCACACTTTACTGTATCTCCTTATaGACCACCATCAGTAATTCTCTCTCTTCCACCAGA +
Preference number: 6 (lower is better)
Translates to: SSGLPTLYCISL*TTISNSLSSTR
Trigger: TCTGGTGGAAGAGAGAGAATTACTGATGGTGGTTCATAAGGAGATACAGTAAAGTGTGGGGAGGCCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS CCA 72 bp CATAAACTGGGTCATCACTTCCTCCTCAGTGCGGAATaGAGAGTACTTATAGATGAGTTCTGTCTCAATGGC +
Preference number: 6 (lower is better)
Translates to: HKLGHHFLLSAE*RVLIDEFCLNG
Trigger: GCCATTGAGACAGAACTCATCTATAAGTACTCTCCATTCCGCACTGAGGAGGAAGTGATGACCCAGTTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000476152.2
ENST00000675601.1
CDS CAA 72 bp TCTAGTTCTGGCTCTCCATTATCCATGAGTTTGAGATaGAAGATGATCACCAATGTTCCGCTGTCCCCAGGA +
Preference number: 6 (lower is better)
Translates to: SSSGSPLSMSLR*KMITNVPLSPG
Trigger: TCCTGGGGACAGCGGAACATTGGTGATCATCTTCAATCTCAAACTCATGGATAATGGAGAGCCAGAACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000476152.2
ENST00000675601.1
CDS CAA 72 bp CTTCGTTTTTATGGCTTGGAGGGTTCTCAAACCAGGTaGTACGTCGGAATGTCTAAAGGGAAAAAGCCTGGT +
Preference number: 6 (lower is better)
Translates to: LRFYGLEGSQTR*YVGMSKGKKPG
Trigger: ACCAGGCTTTTTCCCTTTAGACATTCCGACGTACAACCTGGTTTGAGAACCCTCCAAGCCATAAAAACGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675027.1
CDS CAA 90 bp GCTAGGATTAAGACTTCCCTCCTGCAGGAGGCATTTGACAAGCATTaGGCATTAAAACAAAGCAGTCTTGGTGACAGAATAGCAACCTGT +
Preference number: 6 (lower is better)
Translates to: ARIKTSLLQEAFDKH*ALKQSSLGDRIATC
Trigger: ACAGGTTGCTATTCTGTCACCAAGACTGCTTTGTTTTAATGCCAAATGCTTGTCAAATGCCTCCTGCAGGAGGGAAGTCTTAATCCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS CAA 90 bp GGATTTGAGATTATGTCTAGTTCTGGCTCTCCATTATCCATGAGTTaGAGATTGAAGATGATCACCAATGTTCCGCTGTCCCCAGGAATC +
Preference number: 6 (lower is better)
Translates to: GFEIMSSSGSPLSMS*RLKMITNVPLSPGI
Trigger: GATTCCTGGGGACAGCGGAACATTGGTGATCATCTTCAATCTCAAACTCATGGATAATGGAGAGCCAGAACTAGACATAATCTCAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000476152.2
ENST00000675601.1
CDS TCA 72 bp AGGGGAGGTGGCACTCTAGGCCACAGCAGGGAATATTaGAACATTACATCTAAGACATCTCAATTTATCTCA +
Preference number: 6 (lower is better)
Translates to: RGGGTLGHSREY*NITSKTSQFIS
Trigger: TGAGATAAATTGAGATGTCTTAGATGTAATGTTTCAATATTCCCTGCTGTGGCCTAGAGTGCCACCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS CCA 72 bp GGTCCTCTCGTCTTTCTGCATAAATATCTATTCTGGTaGCATCAGCATCTCTTGCATTATCAACCAGTTCAG +
Preference number: 6 (lower is better)
Translates to: GPLVFLHKYLFW*HQHLLHYQPVQ
Trigger: CTGAACTGGTTGATAATGCAAGAGATGCTGATGCCACCAGAATAGATATTTATGCAGAAAGACGAGAGGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000476152.2
CDS CAA 90 bp GAGATTATGTCTAGTTCTGGCTCTCCATTATCCATGAGTTTGAGATaGAAGATGATCACCAATGTTCCGCTGTCCCCAGGAATCTTCATA +
Preference number: 6 (lower is better)
Translates to: EIMSSSGSPLSMSLR*KMITNVPLSPGIFI
Trigger: TATGAAGATTCCTGGGGACAGCGGAACATTGGTGATCATCTTCAATCTCAAACTCATGGATAATGGAGAGCCAGAACTAGACATAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000476152.2
ENST00000675601.1
CDS TCA 72 bp CTTCCTCCTCAGTGCGGAATGGAGAGTACTTATAGATaGGTTCTGTCTCAATGGCAAATTTCTCTACATTGT +
Preference number: 6 (lower is better)
Translates to: LPPQCGMESTYR*VLSQWQISLHC
Trigger: ACAATGTAGAGAAATTTGCCATTGAGACAGAACTCATCTATAAGTACTCTCCATTCCGCACTGAGGAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000476152.2
ENST00000675601.1
CDS CCA 72 bp GAAGGTCCTCTCGTCTTTCTGCATAAATATCTATTCTaGTGGCATCAGCATCTCTTGCATTATCAACCAGTT +
Preference number: 6 (lower is better)
Translates to: EGPLVFLHKYLF*WHQHLLHYQPV
Trigger: AACTGGTTGATAATGCAAGAGATGCTGATGCCACCAGAATAGATATTTATGCAGAAAGACGAGAGGACCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000476152.2
CDS CCA 72 bp TATCTCTATTTGATGTGTAACCTGTTAGACTTGATATaGACATGCACTGGGCACCAACTCAAAGCATCCCTA +
Preference number: 6 (lower is better)
Translates to: YLYLMCNLLDLI*TCTGHQLKASL
Trigger: TAGGGATGCTTTGAGTTGGTGCCCAGTGCATGTCCATATCAAGTCTAACAGGTTACACATCAAATAGAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS CAA 72 bp ATTATGTCTAGTTCTGGCTCTCCATTATCCATGAGTTaGAGATTGAAGATGATCACCAATGTTCCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: IMSSSGSPLSMS*RLKMITNVPLS
Trigger: GGACAGCGGAACATTGGTGATCATCTTCAATCTCAAACTCATGGATAATGGAGAGCCAGAACTAGACATAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215862.8
ENST00000397641.8
ENST00000469915.1
ENST00000476152.2
ENST00000675601.1
CDS CAA 72 bp GTTTTGTATCTCTATTTGATGTGTAACCTGTTAGACTaGATATGGACATGCACTGGGCACCAACTCAAAGCA +
Preference number: 6 (lower is better)
Translates to: VLYLYLMCNLLD*IWTCTGHQLKA
Trigger: TGCTTTGAGTTGGTGCCCAGTGCATGTCCATATCAAGTCTAACAGGTTACACATCAAATAGAGATACAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS CAA 90 bp AAGCCAAAAGTTTTGTATCTCTATTTGATGTGTAACCTGTTAGACTaGATATGGACATGCACTGGGCACCAACTCAAAGCATCCCTAATT +
Preference number: 6 (lower is better)
Translates to: KPKVLYLYLMCNLLD*IWTCTGHQLKASLI
Trigger: AATTAGGGATGCTTTGAGTTGGTGCCCAGTGCATGTCCATATCAAGTCTAACAGGTTACACATCAAATAGAGATACAAAACTTTTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS TCA 72 bp ATCTCAGTTCTTCAATACAGAGCTCAAGATATCCAGTaGCACATTTCACTCCAGTGGGATACATCTCAAAAA +
Preference number: 6 (lower is better)
Translates to: ISVLQYRAQDIQ*HISLQWDTSQK
Trigger: TTTTTGAGATGTATCCCACTGGAGTGAAATGTGTCACTGGATATCTTGAGCTCTGTATTGAAGAACTGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS TCA 72 bp TGGATTAAACCTGAAACATTCCAGACCATGTTGGAGTaGTTAGATTACTCCTTCATGAACTCAAGAACCATG +
Preference number: 6 (lower is better)
Translates to: WIKPETFQTMLE*LDYSFMNSRTM
Trigger: CATGGTTCTTGAGTTCATGAAGGAGTAATCTAATCACTCCAACATGGTCTGGAATGTTTCAGGTTTAATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS GCA 72 bp TATTTGATGTGTAACCTGTTAGACTTGATATGGACATaGACTGGGCACCAACTCAAAGCATCCCTAATTAAA +
Preference number: 6 (lower is better)
Translates to: YLMCNLLDLIWT*TGHQLKASLIK
Trigger: TTTAATTAGGGATGCTTTGAGTTGGTGCCCAGTGCATGTCCATATCAAGTCTAACAGGTTACACATCAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS CCA 72 bp AAAGCATCCCTAATTAAAAACATGAGTGTGGCTTTTTaGCAACAGGGATGGTTGCCAAACCATTCATATTCA +
Preference number: 6 (lower is better)
Translates to: KASLIKNMSVAF*QQGWLPNHSYS
Trigger: TGAATATGAATGGTTTGGCAACCATCCCTGTTGCCAAAAAGCCACACTCATGTTTTTAATTAGGGATGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS CAA 90 bp AGCTTAAACTTGAAACATGTTAAGCCAAAAGTTTTGTATCTCTATTaGATGTGTAACCTGTTAGACTTGATATGGACATGCACTGGGCAC +
Preference number: 6 (lower is better)
Translates to: SLNLKHVKPKVLYLY*MCNLLDLIWTCTGH
Trigger: GTGCCCAGTGCATGTCCATATCAAGTCTAACAGGTTACACATCAAATAGAGATACAAAACTTTTGGCTTAACATGTTTCAAGTTTAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674576.1
ENST00000676215.1
CDS CAA 72 bp AGTCCAACATTTGGCGATCCAATAGAGCAGTATTTGTaGGATTCCTATAAACACTTGAATGAAACAACTCAA +
Preference number: 6 (lower is better)
Translates to: SPTFGDPIEQYL*DSYKHLNETTQ
Trigger: TTGAGTTGTTTCATTCAAGTGTTTATAGGAATCCAACAAATACTGCTCTATTGGATCGCCAAATGTTGGACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215862.8
CDS CAA 72 bp AATAGTCCAACATTTGGCGATCCAATAGAGCAGTATTaGTTGGATTCCTATAAACACTTGAATGAAACAACT +
Preference number: 6 (lower is better)
Translates to: NSPTFGDPIEQY*LDSYKHLNETT
Trigger: AGTTGTTTCATTCAAGTGTTTATAGGAATCCAACAAATACTGCTCTATTGGATCGCCAAATGTTGGACTATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215862.8