RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MON1A (Homo sapiens)

Ensembl gene IDs: ENSG00000164077

Ensembl transcript IDs: ENST00000296473.7, ENST00000417270.1, ENST00000455683.6, ENST00000473451.1, ENST00000483022.5, ENST00000486107.5, ENST00000493206.1, ENST00000642691.1, ENST00000645862.1

Found 767 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTaGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCT +
Preference number: 1 (lower is better)
Translates to: HSPCPLAGQERPAPI*RLLWLPTPSVSRKA
Trigger: AGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
3UTR GCA 90 bp GCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTaGTGCCATGCCCATTCCAATGTGAGCCACAGTGGGGCCAAGGGC +
Preference number: 1 (lower is better)
Translates to: AYGCSPEALESGLVA*CHAHSNVSHSGAKG
Trigger: GCCCTTGGCCCCACTGTGGCTCACATTGGAATGGGCATGGCAGCAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 90 bp TATGGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGCTaGCATGCCCATTCCAATGTGAGCCACAGTGGGGCCAAGGGCAGG +
Preference number: 1 (lower is better)
Translates to: YGCSPEALESGLVAC*HAHSNVSHSGAKGR
Trigger: CCTGCCCTTGGCCCCACTGTGGCTCACATTGGAATGGGCATGGCAGCAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 90 bp CCAGGGCATGTGTGCAGGGTGAACAGCACCCACCAAGCCTATGGCTaGTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGCTGCCAT +
Preference number: 1 (lower is better)
Translates to: PGHVCRVNSTHQAYG*SPEALESGLVACCH
Trigger: ATGGCAGCAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CCA 90 bp AGACCCAGGGCATGTGTGCAGGGTGAACAGCACCCACCAAGCCTATaGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGCTG +
Preference number: 1 (lower is better)
Translates to: RPRACVQGEQHPPSL*LLPGGFGIWAGSLL
Trigger: CAGCAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 90 bp GCTGGGCTTTCACTGCCGAGCCTCCTGGATGTCCATGGTGCCCCATaGAGGTCTGCCTATGCCATGCCAGGGACTAGGGTGACTAAGGAG +
Preference number: 1 (lower is better)
Translates to: AGLSLPSLLDVHGAP*RSAYAMPGTRVTKE
Trigger: CTCCTTAGTCACCCTAGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACCATGGACATCCAGGAGGCTCGGCAGTGAAAGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CCA 90 bp CAGCACCCACCAAGCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTaGGCTGGTAGCCTGCTGCCATGCCCATTCCAATGTGAGCCACAG +
Preference number: 1 (lower is better)
Translates to: QHPPSLWLLPGGFGI*AGSLLPCPFQCEPQ
Trigger: CTGTGGCTCACATTGGAATGGGCATGGCAGCAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR TCA 90 bp CTCAGAGGCCTGCAGCTAAAGGGAGACTGGATTCTGAATTTCAGCTaGAGACTGGGTTGCCTCACCAGGGGCTCCATCCAGTACCAGGGC +
Preference number: 1 (lower is better)
Translates to: LRGLQLKGDWILNFS*RLGCLTRGSIQYQG
Trigger: GCCCTGGTACTGGATGGAGCCCCTGGTGAGGCAACCCAGTCTTCAGCTGAAATTCAGAATCCAGTCTCCCTTTAGCTGCAGGCCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR TCA 90 bp GTAGGACTTCAACTAAACCAAAACGGCCCCAGCCCAAGATCCAGCTaGGAATGTGTGTGGCCTCATGCTGGTGCAAGGGAGGGAGGAGAG +
Preference number: 1 (lower is better)
Translates to: VGLQLNQNGPSPRSS*ECVWPHAGAREGGE
Trigger: CTCTCCTCCCTCCCTTGCACCAGCATGAGGCCACACACATTCTCAGCTGGATCTTGGGCTGGGGCCGTTTTGGTTTAGTTGAAGTCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR TCA 90 bp GACCCTCAGCTCACTCTTGAGGACCATTTGGAGGAATGCACTGGCTaGGGTAGGAGAACTGAGGCATACAGCCCTTCATGGGAAGGCCTG +
Preference number: 1 (lower is better)
Translates to: DPQLTLEDHLEECTG*GRRTEAYSPSWEGL
Trigger: CAGGCCTTCCCATGAAGGGCTGTATGCCTCAGTTCTCCTACCTCAGCCAGTGCATTCCTCCAAATGGTCCTCAAGAGTGAGCTGAGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 90 bp GAACTAGAAGATCCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTaGCCTGGGTCCTGTGGTAGAGTAAATGGGGCTGGGCTTTCACTG +
Preference number: 1 (lower is better)
Translates to: ELEDPPAAKWKLSAL*PGSCGRVNGAGLSL
Trigger: CAGTGAAAGCCCAGCCCCATTTACTCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGGATCTTCTAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CCA 90 bp GAGCTACGGAGGAGGATCCAGTGTCTGTATGTGAGTGAGGGTGGATaGGCGAAGGGACAAGTGACAGAGCTTGACAAGTGTCTTCCCCAA +
Preference number: 1 (lower is better)
Translates to: ELRRRIQCLYVSEGG*AKGQVTELDKCLPQ
Trigger: TTGGGGAAGACACTTGTCAAGCTCTGTCACTTGTCCCTTCGCCCATCCACCCTCACTCACATACAGACACTGGATCCTCCTCCGTAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CCA 90 bp TTGTGTTCCCTGGGGCCAGAACTAGAAGATCCCCCGGCAGCAAAGTaGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGAGTAAAT +
Preference number: 1 (lower is better)
Translates to: LCSLGPELEDPPAAK*KLSALCPGSCGRVN
Trigger: ATTTACTCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGGATCTTCTAGTTCTGGCCCCAGGGAACACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 90 bp CCACCATGCCCGGCCTGTACTAGGTTCTTACCAGGTCCTTCCCTTTaGACATGCTGGCTCTTCCACTACGAACACCTTCCCTATTTGTCT +
Preference number: 1 (lower is better)
Translates to: PPCPACTRFLPGPSL*TCWLFHYEHLPYLS
Trigger: AGACAAATAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGTAAGAACCTAGTACAGGCCGGGCATGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 90 bp TGCCCGGCCTGTACTAGGTTCTTACCAGGTCCTTCCCTTTGCACATaGTGGCTCTTCCACTACGAACACCTTCCCTATTTGTCTGTCTTC +
Preference number: 1 (lower is better)
Translates to: CPACTRFLPGPSLCT*WLFHYEHLPYLSVF
Trigger: GAAGACAGACAAATAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGTAAGAACCTAGTACAGGCCGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CCA 90 bp CCGGCCTGTACTAGGTTCTTACCAGGTCCTTCCCTTTGCACATGCTaGCTCTTCCACTACGAACACCTTCCCTATTTGTCTGTCTTCCCA +
Preference number: 1 (lower is better)
Translates to: PACTRFLPGPSLCTC*LFHYEHLPYLSVFP
Trigger: TGGGAAGACAGACAAATAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGTAAGAACCTAGTACAGGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR TCA 90 bp TCCAACTATGATCTCCCCAGAATATATGCTGAACTACACAGAAGCTaGGAAACCTACAAGAGTCAGGGCAACCAAAAGAGGCACTTAGGG +
Preference number: 1 (lower is better)
Translates to: SNYDLPRIYAELHRS*ETYKSQGNQKRHLG
Trigger: CCCTAAGTGCCTCTTTTGGTTGCCCTGACTCTTGTAGGTTTCTCAGCTTCTGTGTAGTTCAGCATATATTCTGGGGAGATCATAGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CCA 90 bp GTGTACCCTGGGTCCATGTCACCCACACAGGCTCATTCTTCAATATaGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTCTCAGAAA +
Preference number: 1 (lower is better)
Translates to: VYPGSMSPTQAHSSI*LDFSSRKYWLNSQK
Trigger: TTTCTGAGAGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGTGGGTGACATGGACCCAGGGTACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR TCA 90 bp AAATATTGGCTCAACTCTCAGAAACTGCATGAGGGTGATTCTCTCTaGCAGTCTGAAGACCACATTCAGAGGACAGTTTTCTCCAATAAG +
Preference number: 1 (lower is better)
Translates to: KYWLNSQKLHEGDSL*QSEDHIQRTVFSNK
Trigger: CTTATTGGAGAAAACTGTCCTCTGAATGTGGTCTTCAGACTGTCAGAGAGAATCACCCTCATGCAGTTTCTGAGAGTTGAGCCAATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 90 bp GGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTCTCAGAAACTaGATGAGGGTGATTCTCTCTGACAGTCTGAAGACCACATTCAGA +
Preference number: 1 (lower is better)
Translates to: GLILVAENIGSTLRN*MRVILSDSLKTTFR
Trigger: TCTGAATGTGGTCTTCAGACTGTCAGAGAGAATCACCCTCATGCAGTTTCTGAGAGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR CCA 90 bp ATCCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTATCCCTGCCCGCTGGCTaGGCAAGAGAGGCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: IPRQQSGSSLHCALGPVVSLPAG*AREASP
Trigger: GGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGA...TACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR GCA 90 bp AGAGACCCAGGGCATGTGTGCAGGGTGAACAGCACCCACCAAGCCTATGGCTGCGTGCCTGTGTCCCTGTaGAGGAGCTACGGAGGAGGA +
Preference number: 2 (lower is better)
Translates to: RDPGHVCRVNSTHQAYGCVPVSL*RSYGGG
Trigger: TCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCAC...GCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR GCA 90 bp CTCCTGGATGTCCATGGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGGGACTGTGCCTGTGTCCCTGTaGAGGAGCTACGGAGGAGGA +
Preference number: 2 (lower is better)
Translates to: LLDVHGAPCRSAYAMPGTVPVSL*RSYGGG
Trigger: TCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCAC...AGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACCATGGACATCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CAA 90 bp AGGGTGAACAGCACCCACCAAGCCTATGGCTGCTCCCCGGAGGCTTaGGAATCTGGGCTGGTAGCCTGCTGCCATGCCCATTCCAATGTG +
Preference number: 2 (lower is better)
Translates to: RVNSTHQAYGCSPEA*ESGLVACCHAHSNV
Trigger: CACATTGGAATGGGCATGGCAGCAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGGGTGCTGTTCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR GCA 90 bp CCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGAATGTGTGTGGCCTCATaGTGGTGCAAGGGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: PPAAKWKLSALCPGSCGRMCVAS*WCKGGR
Trigger: CCTCCCTCCCTTGCACCAGCATGAGGCCACACACAT...TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR GCA 90 bp ATCCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTATGCCCCATGCAGGTCTaGCTATGCCATGCCAGGGAC +
Preference number: 2 (lower is better)
Translates to: IPRQQSGSSLHCALGPVVCPMQV*LCHARD
Trigger: GTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCA...TACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR GCA 90 bp AGAGACCCAGGGCATGTGTGCAGGGTGAACAGCACCCACCAAGCCTATGGCTGCGGGCTGGTAGCCTGCTaGCATGCCCATTCCAATGTG +
Preference number: 2 (lower is better)
Translates to: RDPGHVCRVNSTHQAYGCGLVAC*HAHSNV
Trigger: CACATTGGAATGGGCATGGCAGCAGGCTACCAGCCC...GCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR TCA 90 bp CCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGACTTCATGGGAAGGCCTaGGCAGGGACAGTTTCCTCA +
Preference number: 2 (lower is better)
Translates to: PPAAKWKLSALCPGSCGRLHGKA*AGTVSS
Trigger: TGAGGAAACTGTCCCTGCTCAGGCCTTCCCATGAAG...TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR GCA 90 bp ATCCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGTCCATGGTGCCCCATaGAGGTCTGCCTATGCCATG +
Preference number: 2 (lower is better)
Translates to: IPRQQSGSSLHCALGPVVVHGAP*RSAYAM
Trigger: CATGGCATAGGCAGACCTGCATGGGGCACCATGGAC...TACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR CCA 90 bp CTCCTGGATGTCCATGGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGGGACTTTGAGTAGTCTTTTGTaGCATGCAGCAGGGGGCCCC +
Preference number: 2 (lower is better)
Translates to: LLDVHGAPCRSAYAMPGTLSSLL*HAAGGP
Trigger: GGGGCCCCCTGCTGCATGCCACAAAAGACTACTCAA...AGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACCATGGACATCCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR TCA 90 bp ATCCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTACCACAGCGAGGGCTCTaGAGGTGGTTGAGTAGTCTT +
Preference number: 2 (lower is better)
Translates to: IPRQQSGSSLHCALGPVVPQRGL*RWLSSL
Trigger: AAGACTACTCAACCACCTTCAGAGCCCTCGCTGTGG...TACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR CCA 90 bp ACCAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTAAGGCCAGCCCCCATCTaGAGGCTCCTATGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: TRSFPLHMLALPLRTPSLRPAPI*RLLWLP
Trigger: GGGAAGCCATAGGAGCCTCCAGATGGGGGCTGGCCT...TAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR CCA 90 bp AGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCCAGTGTGAGTGAGGGTGGATaGGCGAAGGGACAAGTGACA +
Preference number: 2 (lower is better)
Translates to: RGSNVPVSLCRSYGGGSSVSEGG*AKGQVT
Trigger: TGTCACTTGTCCCTTCGCCCATCCACCCTCACTCAC...ACTGGATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR TCA 90 bp CCAAGCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGCTGACAAGTGACAGAGCTTaGCAAGTGTCTTCCCCAAAG +
Preference number: 2 (lower is better)
Translates to: PSLWLLPGGFGIWAGSLLTSDRA*QVSSPK
Trigger: CTTTGGGGAAGACACTTGTCAAGCTCTGTCACTTGT...CAGCAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR CCA 90 bp TCACTGTTGACCAGAATGCCAGTAACAATCAGGGACAGCTGGCTTGGCATCACCAGGCCAGCCCCCATCTaGAGGCTCCTATGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: SLLTRMPVTIRDSWLGITRPAPI*RLLWLP
Trigger: GGGAAGCCATAGGAGCCTCCAGATGGGGGCTGGCCT...GGTGATGCCAAGCCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR GCA 90 bp TCACTGTTGACCAGAATGCCAGTAACAATCAGGGACAGCTGGCTTGGCATCACCGACCCAGGGCATGTGTaGAGGGTGAACAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: SLLTRMPVTIRDSWLGITDPGHV*RVNSTH
Trigger: GTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTC...GGTGATGCCAAGCCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR GCA 90 bp TCACTGTTGACCAGAATGCCAGTAACAATCAGGGACAGCTGGCTTGGCATCACCCACCAAGCCTATGGCTaGTCCCCGGAGGCTTTGGAA +
Preference number: 2 (lower is better)
Translates to: SLLTRMPVTIRDSWLGITHQAYG*SPEALE
Trigger: TTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTG...GGTGATGCCAAGCCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR CCA 90 bp CAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTATTTGTGTGGCCTCATGCTaGTGCAAGGGAGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: QVLPFAHAGSSTTNTFPICVASC*CKGGRR
Trigger: TCTCCTCCCTCCCTTGCACCAGCATGAGGCCACACA...AATAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR TCA 90 bp AACTACAGCAACCCATTAAACAGAGCCACAGCGAGGGCTCTGAAGGTGGTTGAGGGGCGAAGGGACAAGTaGCAGAGCTTGACAAGTGTC +
Preference number: 2 (lower is better)
Translates to: NYSNPLNRATARALKVVEGRRDK*QSLTSV
Trigger: GACACTTGTCAAGCTCTGTCACTTGTCCCTTCGCCC...CTCAACCACCTTCAGAGCCCTCGCTGTGGCTCTGTTTAATGGGTTGCTGTAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR TCA 90 bp ATTCAGAGGACAGTTTTCTCCAATAAGTACTTCCTAGGCCTTGTGTTCCCTGGGTGCCAGGGACTAGGGTaGCTAAGGAGGGCCGAGTGC +
Preference number: 2 (lower is better)
Translates to: IQRTVFSNKYFLGLVFPGCQGLG*LRRAEC
Trigger: GCACTCGGCCCTCCTTAGTCACCCTAGTCCCTGGCA...CCCAGGGAACACAAGGCCTAGGAAGTACTTATTGGAGAAAACTGTCCTCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR GCA 90 bp ATTCAGAGGACAGTTTTCTCCAATAAGTACTTCCTAGGCCTTGTGTTCCCTGGGGTGGCCTCATGCTGGTaGAAGGGAGGGAGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: IQRTVFSNKYFLGLVFPGVASCW*KGGRRG
Trigger: CCCTCTCCTCCCTCCCTTGCACCAGCATGAGGCCAC...CCCAGGGAACACAAGGCCTAGGAAGTACTTATTGGAGAAAACTGTCCTCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR GCA 90 bp CAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTATTGGTAGCCTGCTGCCATaGCCATTCCAATGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: QVLPFAHAGSSTTNTFPIGSLLP*PFQCEP
Trigger: TGGCTCACATTGGAATGGGCATGGCAGCAGGCTACC...AATAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CAA 90 bp CTACAAGAGTCAGGGCAACCAAAAGAGGCACTTAGGGGCTCACTGTaGACCAGAATGCCAGTAACAATCAGGGACAGCTGGCTTGGCATC +
Preference number: 2 (lower is better)
Translates to: LQESGQPKEALRGSL*TRMPVTIRDSWLGI
Trigger: GATGCCAAGCCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGAGCCCCTAAGTGCCTCTTTTGGTTGCCCTGACTCTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR CCA 90 bp AACTACAGCAACCCATTAAACAGAGCCACAGCGAGGGCTCTGAAGGTGGTTGAGATCTGGAGGCTCCTATaGCTTCCCACACCTAGTGTG +
Preference number: 2 (lower is better)
Translates to: NYSNPLNRATARALKVVEIWRLL*LPTPSV
Trigger: CACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT...CTCAACCACCTTCAGAGCCCTCGCTGTGGCTCTGTTTAATGGGTTGCTGTAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR CCA 90 bp CTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCCCCAGAACAGTCCCTGCCCGCTaGCTGGGCAAGAGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: LGAYSPRYTHLSNYDLPRTVPAR*LGKRGQ
Trigger: CTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGT...TCTGGGGAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR CCA 90 bp ATTCAGAGGACAGTTTTCTCCAATAAGTACTTCCTAGGCCTTGTGTTCCCTGGGCCTCCTGGATGTCCATaGTGCCCCATGCAGGTCTGC +
Preference number: 2 (lower is better)
Translates to: IQRTVFSNKYFLGLVFPGPPGCP*CPMQVC
Trigger: GCAGACCTGCATGGGGCACCATGGACATCCAGGAGG...CCCAGGGAACACAAGGCCTAGGAAGTACTTATTGGAGAAAACTGTCCTCTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR TCA 90 bp GTGTACCCTGGGTCCATGTCACCCACACAGGCTCATTCTTCAATATGGCTTGATGGCTCTGAAGGTGGTTaGGTAGTCTTTTGTGGCATG +
Preference number: 2 (lower is better)
Translates to: VYPGSMSPTQAHSSIWLDGSEGG*VVFCGM
Trigger: CATGCCACAAAAGACTACTCAACCACCTTCAGAGCC...ATCAAGCCATATTGAAGAATGAGCCTGTGTGGGTGACATGGACCCAGGGTACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR GCA 90 bp CTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCCCCAGAGACCCAGGGCATGTGTaGAGGGTGAACAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: LGAYSPRYTHLSNYDLPRDPGHV*RVNSTH
Trigger: GTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTC...TCTGGGGAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR CCA 90 bp CTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCCCCAGACCTCCTGGATGTCCATaGTGCCCCATGCAGGTCTGC +
Preference number: 2 (lower is better)
Translates to: LGAYSPRYTHLSNYDLPRPPGCP*CPMQVC
Trigger: GCAGACCTGCATGGGGCACCATGGACATCCAGGAGG...TCTGGGGAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR CCA 90 bp CTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCCCCAGACCCCCGGCAGCAAAGTaGAAGCTCTCTGCATTGTGC +
Preference number: 2 (lower is better)
Translates to: LGAYSPRYTHLSNYDLPRPPAAK*KLSALC
Trigger: GCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG...TCTGGGGAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR CCA 90 bp ACACTCCTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCCACCCACCAAGCCTATaGCTGCTCCCCGGAGGCTTT +
Preference number: 2 (lower is better)
Translates to: TLLGAYSPRYTHLSNYDLHPPSL*LLPGGF
Trigger: AAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGGGTG...GAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAGGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR GCA 90 bp AGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTGTGGCCTCATGCTGGTaGAAGGGAGGGAGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: RLILQYGLILVAENIGSTVASCW*KGGRRG
Trigger: CCCTCTCCTCCCTCCCTTGCACCAGCATGAGGCCAC...AGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR TCA 90 bp ACACTCCTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCAGCCCAAGATCCAGCTaGGAATGTGTGTGGCCTCAT +
Preference number: 2 (lower is better)
Translates to: TLLGAYSPRYTHLSNYDLSPRSS*ECVWPH
Trigger: ATGAGGCCACACACATTCTCAGCTGGATCTTGGGCT...GAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAGGAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR GCA 90 bp CACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCACCTGGATGTCCATGGTaGCCCATGCAGGTCTGCCTA +
Preference number: 2 (lower is better)
Translates to: HRLILQYGLILVAENIGSPGCPW*PMQVCL
Trigger: TAGGCAGACCTGCATGGGGCACCATGGACATCCAGG...TGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CAA 90 bp ACCCTGGGTCCATGTCACCCACACAGGCTCATTCTTCAATATGGCTaGATTTTAGTAGCAGAAAATATTGGCTCAACTCTCAGAAACTGC +
Preference number: 2 (lower is better)
Translates to: TLGPCHPHRLILQYG*ILVAENIGSTLRNC
Trigger: GCAGTTTCTGAGAGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGTGGGTGACATGGACCCAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR TCA 90 bp CACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCACCACAGCGAGGGCTCTaGAGGTGGTTGAGTAGTCTT +
Preference number: 2 (lower is better)
Translates to: HRLILQYGLILVAENIGSPQRGL*RWLSSL
Trigger: AAGACTACTCAACCACCTTCAGAGCCCTCGCTGTGG...TGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR TCA 90 bp CTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCCCCAGATTCTCTCTGACAGTCTaGAGACCACATTCAGAGGAC +
Preference number: 2 (lower is better)
Translates to: LGAYSPRYTHLSNYDLPRFSLTV*RPHSED
Trigger: GTCCTCTGAATGTGGTCTTCAGACTGTCAGAGAGAA...TCTGGGGAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR CCA 90 bp ACACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCGTGAGTGAGGGTGGATaGGCGAAGGGACAAGTGACA +
Preference number: 2 (lower is better)
Translates to: TQAHSSIWLDFSSRKYWLVSEGG*AKGQVT
Trigger: TGTCACTTGTCCCTTCGCCCATCCACCCTCACTCAC...GAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR TCA 90 bp ACACTCCTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCAGGGAGACTGGATTCTaGATTTCAGCTGAAGACTGG +
Preference number: 2 (lower is better)
Translates to: TLLGAYSPRYTHLSNYDLRETGF*ISAEDW
Trigger: CCAGTCTTCAGCTGAAATTCAGAATCCAGTCTCCCT...GAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAGGAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR TCA 90 bp ACACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCCCCTCAGCTCACTCTTaGGGACCATTTGGAGGAATG +
Preference number: 2 (lower is better)
Translates to: TQAHSSIWLDFSSRKYWLPSAHS*GPFGGM
Trigger: CATTCCTCCAAATGGTCCTCAAGAGTGAGCTGAGGG...GAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR TCA 90 bp CTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTCTCAGCCCAAGATCCAGCTaGGAATGTGTGTGGCCTCAT +
Preference number: 2 (lower is better)
Translates to: LILQYGLILVAENIGSTLSPRSS*ECVWPH
Trigger: ATGAGGCCACACACATTCTCAGCTGGATCTTGGGCT...GAGAGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR GCA 90 bp AGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTAAGCTCTCTGCATTGTaGCCTGGGTCCTGTGGTAGA +
Preference number: 2 (lower is better)
Translates to: RLILQYGLILVAENIGSTKLSAL*PGSCGR
Trigger: TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTT...AGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CCA 72 bp TGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTaGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCC +
Preference number: 3 (lower is better)
Translates to: CPLAGQERPAPI*RLLWLPTPSVS
Trigger: GGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
3UTR CCA 72 bp GGCTGGGCTTTCACTGCCGAGCCTCCTGGATGTCCATaGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGG +
Preference number: 3 (lower is better)
Translates to: GWAFTAEPPGCP*CPMQVCLCHAR
Trigger: CCTGGCATGGCATAGGCAGACCTGCATGGGGCACCATGGACATCCAGGAGGCTCGGCAGTGAAAGCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 72 bp TCACTGCCGAGCCTCCTGGATGTCCATGGTGCCCCATaGAGGTCTGCCTATGCCATGCCAGGGACTAGGGTG +
Preference number: 3 (lower is better)
Translates to: SLPSLLDVHGAP*RSAYAMPGTRV
Trigger: CACCCTAGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACCATGGACATCCAGGAGGCTCGGCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 72 bp TGGGCTTTCACTGCCGAGCCTCCTGGATGTCCATGGTaGCCCATGCAGGTCTGCCTATGCCATGCCAGGGAC +
Preference number: 3 (lower is better)
Translates to: WAFTAEPPGCPW*PMQVCLCHARD
Trigger: GTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACCATGGACATCCAGGAGGCTCGGCAGTGAAAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 72 bp GTGTGCAGGGTGAACAGCACCCACCAAGCCTATGGCTaGTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCC +
Preference number: 3 (lower is better)
Translates to: VCRVNSTHQAYG*SPEALESGLVA
Trigger: GGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 72 bp GGAGGCTTTGGAATCTGGGCTGGTAGCCTGCTGCCATaGCCATTCCAATGTGAGCCACAGTGGGGCCAAGGG +
Preference number: 3 (lower is better)
Translates to: GGFGIWAGSLLP*PFQCEPQWGQG
Trigger: CCCTTGGCCCCACTGTGGCTCACATTGGAATGGGCATGGCAGCAGGCTACCAGCCCAGATTCCAAAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 72 bp TGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTaGTGCCATGCCCATTCCAATGTGAGCCACAGTGGG +
Preference number: 3 (lower is better)
Translates to: CSPEALESGLVA*CHAHSNVSHSG
Trigger: CCCACTGTGGCTCACATTGGAATGGGCATGGCAGCAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CCA 72 bp GCATGTGTGCAGGGTGAACAGCACCCACCAAGCCTATaGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGT +
Preference number: 3 (lower is better)
Translates to: ACVQGEQHPPSL*LLPGGFGIWAG
Trigger: ACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR TCA 72 bp ACAGGCATAAAAGAGACCCAGGGCATGTGTGCAGGGTaGACAGCACCCACCAAGCCTATGGCTGCTCCCCGG +
Preference number: 3 (lower is better)
Translates to: TGIKETQGMCAG*TAPTKPMAAPR
Trigger: CCGGGGAGCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTCTCTTTTATGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 72 bp GATCCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTaGCCTGGGTCCTGTGGTAGAGTAAATGGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: DPPAAKWKLSAL*PGSCGRVNGAG
Trigger: CCCAGCCCCATTTACTCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CCA 72 bp CTGGGGCCAGAACTAGAAGATCCCCCGGCAGCAAAGTaGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGT +
Preference number: 3 (lower is better)
Translates to: LGPELEDPPAAK*KLSALCPGSCG
Trigger: ACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGGATCTTCTAGTTCTGGCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CCA 72 bp CCAAGCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTaGGCTGGTAGCCTGCTGCCATGCCCATTCCAATGT +
Preference number: 3 (lower is better)
Translates to: PSLWLLPGGFGI*AGSLLPCPFQC
Trigger: ACATTGGAATGGGCATGGCAGCAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 72 bp AGGGAGGAGAGGGGCTCAAATGTGCCTGTGTCCCTGTaGAGGAGCTACGGAGGAGGATCCAGTGTCTGTATG +
Preference number: 3 (lower is better)
Translates to: REERGSNVPVSL*RSYGGGSSVCM
Trigger: CATACAGACACTGGATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCTCTCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CCA 72 bp ACAGCTGGCTTGGCATCACCCAGGCCCCAGAGGCAGTaGTTTGGTGTTCTTACTAGGAGCAGGGGAGGAACA +
Preference number: 3 (lower is better)
Translates to: TAGLASPRPQRQ*FGVLTRSRGGT
Trigger: TGTTCCTCCCCTGCTCCTAGTAAGAACACCAAACCACTGCCTCTGGGGCCTGGGTGATGCCAAGCCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR TCA 72 bp GGAGCTACGGAGGAGGATCCAGTGTCTGTATGTGAGTaGGGGTGGATGGGCGAAGGGACAAGTGACAGAGCT +
Preference number: 3 (lower is better)
Translates to: GATEEDPVSVCE*GWMGEGTSDRA
Trigger: AGCTCTGTCACTTGTCCCTTCGCCCATCCACCCTCACTCACATACAGACACTGGATCCTCCTCCGTAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR TCA 72 bp CAACTAAACCAAAACGGCCCCAGCCCAAGATCCAGCTaGGAATGTGTGTGGCCTCATGCTGGTGCAAGGGAG +
Preference number: 3 (lower is better)
Translates to: QLNQNGPSPRSS*ECVWPHAGARE
Trigger: CTCCCTTGCACCAGCATGAGGCCACACACATTCTCAGCTGGATCTTGGGCTGGGGCCGTTTTGGTTTAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR TCA 72 bp CTGCAGCTAAAGGGAGACTGGATTCTGAATTTCAGCTaGAGACTGGGTTGCCTCACCAGGGGCTCCATCCAG +
Preference number: 3 (lower is better)
Translates to: LQLKGDWILNFS*RLGCLTRGSIQ
Trigger: CTGGATGGAGCCCCTGGTGAGGCAACCCAGTCTTCAGCTGAAATTCAGAATCCAGTCTCCCTTTAGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR TCA 72 bp CTCACTCTTGAGGACCATTTGGAGGAATGCACTGGCTaGGGTAGGAGAACTGAGGCATACAGCCCTTCATGG +
Preference number: 3 (lower is better)
Translates to: LTLEDHLEECTG*GRRTEAYSPSW
Trigger: CCATGAAGGGCTGTATGCCTCAGTTCTCCTACCTCAGCCAGTGCATTCCTCCAAATGGTCCTCAAGAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CCA 72 bp AGGAGGATCCAGTGTCTGTATGTGAGTGAGGGTGGATaGGCGAAGGGACAAGTGACAGAGCTTGACAAGTGT +
Preference number: 3 (lower is better)
Translates to: RRIQCLYVSEGG*AKGQVTELDKC
Trigger: ACACTTGTCAAGCTCTGTCACTTGTCCCTTCGCCCATCCACCCTCACTCACATACAGACACTGGATCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR-3UTR CAA 90 bp TCACTGTTGACCAGAATGCCAGTAACAATCAGGGACAGCTGGCTTGGCATCACCCCCAGAGGCAGTGGTTaGGTGTTCTTACTAGGAGCA +
Preference number: 3 (lower is better)
Translates to: SLLTRMPVTIRDSWLGITPRGSG*VFLLGA
Trigger: TGCTCCTAGTAAGAACACCAAACCACTGCCTCTGGG...GGTGATGCCAAGCCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 72 bp TGTACTAGGTTCTTACCAGGTCCTTCCCTTTGCACATaGTGGCTCTTCCACTACGAACACCTTCCCTATTTG +
Preference number: 3 (lower is better)
Translates to: CTRFLPGPSLCT*WLFHYEHLPYL
Trigger: CAAATAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGTAAGAACCTAGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CCA 72 bp TTCTGGGACAATAAATACAACTGTTCCAGTGTACCCTaGGTCCATGTCACCCACACAGGCTCATTCTTCAAT +
Preference number: 3 (lower is better)
Translates to: FWDNKYNCSSVP*VHVTHTGSFFN
Trigger: ATTGAAGAATGAGCCTGTGTGGGTGACATGGACCCAGGGTACACTGGAACAGTTGTATTTATTGTCCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR GCA 72 bp TTAGTAGCAGAAAATATTGGCTCAACTCTCAGAAACTaGATGAGGGTGATTCTCTCTGACAGTCTGAAGACC +
Preference number: 3 (lower is better)
Translates to: LVAENIGSTLRN*MRVILSDSLKT
Trigger: GGTCTTCAGACTGTCAGAGAGAATCACCCTCATGCAGTTTCTGAGAGTTGAGCCAATATTTTCTGCTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CCA 72 bp GGGTCCATGTCACCCACACAGGCTCATTCTTCAATATaGCTTGATTTTAGTAGCAGAAAATATTGGCTCAAC +
Preference number: 3 (lower is better)
Translates to: GSMSPTQAHSSI*LDFSSRKYWLN
Trigger: GTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGTGGGTGACATGGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGCCGTGGGCAGGTCCTaGCCCGGGTCCGCGATTGCC +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGAVGRS*PGSAIA
Trigger: GGCAATCGCGGACCCGGGTCAGGACCTGCCCACGGC...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS-3UTR GCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCCTGCGCGCACGCGCCTaGTGCAGGCTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGLRARA*CRLALT
Trigger: TGTGAGCGCCAGCCTGCAGCAGGCGCGTGCGCGCAG...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGATGGCACTGACGGCTaGCGCCTTGGTCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGDGTDG*RLGPQG
Trigger: CCCCTGGGGACCAAGGCGTCAGCCGTCAGTGCCATC...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGCGCACGCGCCTGCTaGAGGCTGGCGCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRRARAC*RLALTV
Trigger: CACTGTGAGCGCCAGCCTGCAGCAGGCGCGTGCGCG...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGCGGCGCCGAGGGACTaGTTCTGGGCTCCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGAAPRD*FWAPSP
Trigger: GGGACTAGGAGCCCAGAACCAGTCCCTCGGCGCCGC...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS-3UTR CCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGTCCCTGCCCGCTGGCTaGGCAAGAGAGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRSLPAG*AREASP
Trigger: GGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGA...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGGATGGCACTGACGGCTaGCGCCTTGGTCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRDGTDG*RLGPQG
Trigger: CCCCTGGGGACCAAGGCGTCAGCCGTCAGTGCCATC...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCAGCTCTTGTGCCGACTaGCGCGTACGAGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGSSCAD*RVRATA
Trigger: GGCGGTGGCTCGTACGCGGCAGTCGGCACAAGAGCT...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGGGTGGGCTCCGCGCTTaGGAAGGCGCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRGGLRA*EGAPGS
Trigger: GCTTCCAGGAGCGCCTTCGCAAGCGCGGAGCCCACC...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGTAGGGTGTGCGCAGTaGCTCTCGCAGGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGVGCAQ*LSQGQV
Trigger: CACCTGGCCCTGCGAGAGGCACTGCGCACACCCTAC...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGGCGCCATGCCTCCGTaGCATCCTCCTCATCCCCCT +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGGAMPP*HPPHPP
Trigger: AGGGGGATGAGGAGGATGCCACGGAGGCATGGCGCC...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGGCGCCTGCTGCAGGCTaGCGCTCACAGTGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRAPAAG*RSQCRA
Trigger: TGCGCGACACTGTGAGCGCCAGCCTGCAGCAGGCGC...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGAGCTCTTGTGCCGACTaGCGCGTACGAGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRSSCAD*RVRATA
Trigger: GGCGGTGGCTCGTACGCGGCAGTCGGCACAAGAGCT...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCCCTGGCTCCATTCCCTaGGCCATTCCTGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGPGSIP*AIPGVG
Trigger: CCCCACACCAGGAATGGCCCAGGGAATGGAGCCAGG...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGGGGCATGGACGAACATaGCACCCTCCTGGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRGHGRT*HPPGPH
Trigger: GTGCGGGCCAGGAGGGTGCCATGTTCGTCCATGCCC...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGTGGGGTCTCGTGCCATaGGCTGCAGCAGGTTGTCGG +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRWGLVP*AAAGCR
Trigger: CCGACAACCTGCTGCAGCTCATGGCACGAGACCCCA...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGTGCCAGGGACTAGGGTaGCTAAGGAGGGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRCQGLG*LRRAEC
Trigger: GCACTCGGCCCTCCTTAGTCACCCTAGTCCCTGGCA...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGAGGACGCACAGAAGGTaGCGGTCACTGCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRRTHRR*RSLPSA
Trigger: GGCAGAGGGCAGTGACCGGCACCTTCTGTGCGTCCT...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
CDS-3UTR CCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCTGCGTACACAGACATaGCCACAGCGCAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRLRTQT*PQRRHR
Trigger: GCGGTGCCTGCGCTGTGGCCATGTCTGTGTACGCAG...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCTCCCTGGGCCATTCCTaGTGTGGGGCTCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGSLGHS*CGALSS
Trigger: AGAGCTGAGAGCCCCACACCAGGAATGGCCCAGGGA...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCAACATGGCACCCTCCTaGCCCGCACCTGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGNMAPS*PAPGSI
Trigger: AATGGAGCCAGGTGCGGGCCAGGAGGGTGCCATGTT...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCCTGGTACCCTCCTTGTaGCTGTCCCCAGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGLVPSL*LSPEAA
Trigger: GGCAGCTTCTGGGGACAGCCACAAGGAGGGTACCAG...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGAGGCCAGCCCCCATCTaGAGGCTCCTATGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRRPAPI*RLLWLP
Trigger: GGGAAGCCATAGGAGCCTCCAGATGGGGGCTGGCCT...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCCCTCCTGGATGTCCATaGTGCCCCATGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGPPGCP*CPMQVC
Trigger: GCAGACCTGCATGGGGCACCATGGACATCCAGGAGG...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACGCCGTGGGCAGGTCCTaGCCCGGGTCCGCGATTGCC +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHAVGRS*PGSAIA
Trigger: GGCAATCGCGGACCCGGGTCAGGACCTGCCCACGGC...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS-3UTR TCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGGCTTATGGATGGCACTaGCGGCTGACGCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRAYGWH*RLTPWS
Trigger: GGACCAAGGCGTCAGCCGTCAGTGCCATCCATAAGC...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGGCGGTCTTCCTCTTTaGGGATCCAGCGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGGGLPL*GSSASA
Trigger: AGCTGATGCGCTGGATCCGCAAAGAGGAAGACCGCC...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGGGGCCATTCCTGGTGTaGGGCTCTCAGCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRGPFLV*GSQLSP
Trigger: TGGAGAGAGCTGAGAGCCCCACACCAGGAATGGCCC...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGGGCGAGAGGCATTGTaGGCACGACTGTGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGGREAL*ARLCKY
Trigger: GTACTTGCACAGTCGTGCCCACAATGCCTCTCGCCC...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCAAGCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGCTGTCCCTGCCCGCTGGCTaGGCAAGAGAGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PSLWLLPGGFGIWAGSLLSLPAG*AREASP
Trigger: GGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGA...CAGCAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCACAATCAGGGACAGCTaGCTTGGCATCACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGTIRDS*LGITQA
Trigger: GGCCTGGGTGATGCCAAGCCAGCTGTCCCTGATTGT...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCCAATCTCAGGGCTGGTaGAGAGTCCCGAGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGQSQGW*RVPSSL
Trigger: CAAAGAGCTCGGGACTCTTCACCAGCCCTGAGATTG...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGGGCGAAGGGACAAGTaGCAGAGCTTGACAAGTGTC +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGGRRDK*QSLTSV
Trigger: GACACTTGTCAAGCTCTGTCACTTGTCCCTTCGCCC...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCAGGTTGAAGAGCAGGTaGAGGTCGATGGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGRLKSR*RSMGCR
Trigger: TCTGCACCCCATCGACCTGCACCTGCTCTTCAACCT...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGTGGAAGAAGCCGGCTaGGTTGAATTTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGVEEAG*VEFGQA
Trigger: TGCCTGCCCAAATTCAACGCAGCCGGCTTCTTCCAC...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGCGGCAGTCAGAGACTaGAAAGAAGTCCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGAAVRD*KEVLTV
Trigger: GACCGTGAGGACTTCTTTGCAGTCTCTGACTGCCGC...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCCCAGCAGCCGCTCCTaGTCCTCTTCACTGGTGTAT +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRPSSRS*SSSLVY
Trigger: ATACACCAGTGAAGAGGAGCAGGAGCGGCTGCTGGG...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCCTGGATGTCCATGGTaGCCCATGCAGGTCTGCCTA +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRPGCPW*PMQVCL
Trigger: TAGGCAGACCTGCATGGGGCACCATGGACATCCAGG...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGGGGCTGGTAGCCTGCTaGCATGCCCATTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRGLVAC*HAHSNV
Trigger: CACATTGGAATGGGCATGGCAGCAGGCTACCAGCCC...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGGCCACACCCGTCAGCTaGGTGCTTAGCTCGCTAAAG +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRATPVS*VLSSLK
Trigger: CTTTAGCGAGCTAAGCACCCAGCTGACGGGTGTGGC...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCTTCTGCTGGAAGATGTaGCTCAGCTGCGCACCGGTA +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGFCWKM*LSCAPV
Trigger: TACCGGTGCGCAGCTGAGCCACATCTTCCAGCAGAA...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGCAGGTGCAGGTCGATaGGGTGCAGAAATTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGAGAGR*GAEIGP
Trigger: AGGACCAATTTCTGCACCCCATCGACCTGCACCTGC...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCCAGCGCATCAGCTTATaGATGGCACTGACGGCTGAC +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGQRISL*MALTAD
Trigger: GTCAGCCGTCAGTGCCATCCATAAGCTGATGCGCTG...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACTCCCTGCCCGCTGGCTaGGCAAGAGAGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHSLPAG*AREASP
Trigger: GGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGA...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACGATGGCACTGACGGCTaGCGCCTTGGTCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHDGTDG*RLGPQG
Trigger: CCCCTGGGGACCAAGGCGTCAGCCGTCAGTGCCATC...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACACCCGGGTCCGCGATTaGCTCATCCGGCGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHTRVRD*LIRRRL
Trigger: AAGGCGGCGCCGGATGAGGCAATCGCGGACCCGGGT...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS-3UTR GCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGTCTCGTGCCATGAGCTaGAGCAGGTTGTCGGTGATG +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRSRAMS*SRLSVM
Trigger: CATCACCGACAACCTGCTGCAGCTCATGGCACGAGA...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACCAGGGGCAGGCACCGTaGCGCCCCCATCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHQGQAP*RPHQEA
Trigger: AGCTTCCTGATGGGGGCGGCACGGTGCCTGCCCCTG...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCCTGCGCGCACGCGCCTaGTGCAGGCTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPLRARA*CRLALT
Trigger: TGTGAGCGCCAGCCTGCAGCAGGCGCGTGCGCGCAG...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGGCGGCAGTCAGAGACTaGAAAGAAGTCCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRAAVRD*KEVLTV
Trigger: GACCGTGAGGACTTCTTTGCAGTCTCTGACTGCCGC...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCAAGCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGCTGCGAGACTCTGGCCACTaGCCCCTACCGGATCTCGCC +
Preference number: 4 (lower is better)
Translates to: PSLWLLPGGFGIWAGSLLRDSGH*PLPDLA
Trigger: GGCGAGATCCGGTAGGGGGCAGTGGCCAGAGTCTCG...CAGCAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642691.1
CDS-3UTR CCA 90 bp CCACCAAGCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGGGGCATGGACGAACATaGCACCCTCCTGGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: PPSLWLLPGGFGIWAGSLGHGRT*HPPGPH
Trigger: GTGCGGGCCAGGAGGGTGCCATGTTCGTCCATGCCC...CAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACGCGGCGGGGGACCCCTaGTACCCTCCTTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHAAGDP*YPPCGC
Trigger: ACAGCCACAAGGAGGGTACCAGGGGTCCCCCGCCGC...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCATGGATGGAGCGGATaGCGTTCTTGTCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRHGWSG*RSCLPP
Trigger: TGGAGGCAGACAAGAACGCCATCCGCTCCATCCATG...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCAGCCATCTGCATGGATaGAGCGGATGGCGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGSHLHG*SGWRSC
Trigger: ACAAGAACGCCATCCGCTCCATCCATGCAGATGGCT...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCATGGGGTGCAGAAATTaGTCCTTTCGGCGCACGAGT +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGMGCRN*SFRRTS
Trigger: ACTCGTGCGCCGAAAGGACCAATTTCTGCACCCCAT...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGGCAGGTGCAGGTCGATaGGGTGCAGAAATTGGTCCT +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRAGAGR*GAEIGP
Trigger: AGGACCAATTTCTGCACCCCATCGACCTGCACCTGC...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCCCTGCTCCTCTTCACTaGTGTATGGGGCCTCAATCT +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGPAPLH*CMGPQS
Trigger: AGATTGAGGCCCCATACACCAGTGAAGAGGAGCAGG...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCTCCCTGCCCGCTGGCTaGGCAAGAGAGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPSLPAG*AREASP
Trigger: GGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGA...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGGTGAGTGAGGGTGGATaGGCGAAGGGACAAGTGACA +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRVSEGG*AKGQVT
Trigger: TGTCACTTGTCCCTTCGCCCATCCACCCTCACTCAC...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCCAGTGATGGCACTGACGGCTaGCGCCTTGGTCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RGSNVPVSLCRSYGGGSSDGTDG*RLGPQG
Trigger: CCCCTGGGGACCAAGGCGTCAGCCGTCAGTGCCATC...ACTGGATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCTCAGTAGCCATCCTTTaGGCTCTCCTAGGTGTCATG +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGSVAIL*ALLGVM
Trigger: CATGACACCTAGGAGAGCTCAAAGGATGGCTACTGA...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417270.1
CDS-3UTR TCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCTGGGGACTAGCCGGCTaGGGGACCGCAGGGAGACAC +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPWGLAG*GTAGRH
Trigger: GTGTCTCCCTGCGGTCCCTCAGCCGGCTAGTCCCCA...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGGCTGGTCGCCCAACTaGCCCTGGGGGTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPGWSPN*PWGFQP
Trigger: TGGCTGGAACCCCCAGGGGCAGTTGGGCGACCAGCC...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCTCAGCACAAAGACATaGTTCTGGTGCAGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRLSTKT*FWCRRH
Trigger: ATGGCGCCTGCACCAGAAGCATGTCTTTGTGCTGAG...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCATAGTGCTGGAAAGTaGCTCCTCAGACCCATAGCG +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRHSAGK*LLRPIA
Trigger: CGCTATGGGTCTGAGGAGGCACTTTCCAGCACTATG...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACAGCTCTTGTGCCGACTaGCGCGTACGAGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHSSCAD*RVRATA
Trigger: GGCGGTGGCTCGTACGCGGCAGTCGGCACAAGAGCT...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCCTGGATGTCCATGGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGGGACTAGCTCTTGTGCCGACTaGCGCGTACGAGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: LLDVHGAPCRSAYAMPGTSSCAD*RVRATA
Trigger: GGCGGTGGCTCGTACGCGGCAGTCGGCACAAGAGCT...AGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACCATGGACATCCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGACTGCGCCAGCTCTTGTaGCGACTGCCGCGTACGAGC +
Preference number: 4 (lower is better)
Translates to: PPAAKWKLSALCPGSCGRLRQLL*RLPRTS
Trigger: GCTCGTACGCGGCAGTCGGCACAAGAGCTGGCGCAG...TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGAAGATGTGGCTCAGCTaGGCACCGGTAAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRKMWLS*APVRRL
Trigger: AAGCCTTCTTACCGGTGCGCAGCTGAGCCACATCTT...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCCAGTCAGGGGCAGGCACCGTaGCGCCCCCATCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: RGSNVPVSLCRSYGGGSSQGQAP*RPHQEA
Trigger: AGCTTCCTGATGGGGGCGGCACGGTGCCTGCCCCTG...ACTGGATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCGCGCACGCGCCTGCTaGAGGCTGGCGCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFRARAC*RLALTV
Trigger: CACTGTGAGCGCCAGCCTGCAGCAGGCGCGTGCGCG...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCTGCGCGCACGCGCCTaGTGCAGGCTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHILRARA*CRLALT
Trigger: TGTGAGCGCCAGCCTGCAGCAGGCGCGTGCGCGCAG...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GAATGTGTGTGGCCTCATGCTGGTGCAAGGGAGGGAGGAGAGGGGCTCAAATGTCTGCGCGCACGCGCCTaGTGCAGGCTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: ECVWPHAGAREGGEGLKCLRARA*CRLALT
Trigger: TGTGAGCGCCAGCCTGCAGCAGGCGCGTGCGCGCAG...ACATTTGAGCCCCTCTCCTCCCTCCCTTGCACCAGCATGAGGCCACACACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCTGCGCGCACGCGCCTaGTGCAGGCTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFLRARA*CRLALT
Trigger: TGTGAGCGCCAGCCTGCAGCAGGCGCGTGCGCGCAG...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACTGGAGAAGACCAGGCTaGGCGCACGCGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHWRRPG*AHAPAA
Trigger: TGCAGCAGGCGCGTGCGCGCAGCCTGGTCTTCTCCA...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GGAGAGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCTGGAGAAGACCAGGCTaGGCGCACGCGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GEGLKCACVPVQELRRRIWRRPG*AHAPAA
Trigger: TGCAGCAGGCGCGTGCGCGCAGCCTGGTCTTCTCCA...GATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCAAGCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGCTGGTGCCACGAGCTGGTTaGGGGCCAGCAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: PSLWLLPGGFGIWAGSLLVPRAG*GPAGWR
Trigger: TCTCCATCCTGCTGGCCCGCAACCAGCTCGTGGCAC...CAGCAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACCTTTCGGCGCACGAGTaGCACGAGCTGGTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHLSAHE*HELVAG
Trigger: GCCCGCAACCAGCTCGTGGCACTCGTGCGCCGAAAG...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GGAGAGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCCTTTCGGCGCACGAGTaGCACGAGCTGGTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: GEGLKCACVPVQELRRRILSAHE*HELVAG
Trigger: GCCCGCAACCAGCTCGTGGCACTCGTGCGCCGAAAG...GATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGGTGGGCTCCGCGCTTaGGAAGGCGCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPGGLRA*EGAPGS
Trigger: GCTTCCAGGAGCGCCTTCGCAAGCGCGGAGCCCACC...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGAGCTCGCTAAAGTCCTaGCTGATCTGGCGCATGTCT +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRSSLKS*LIWRMS
Trigger: AGACATGCGCCAGATCAGCCAGGACTTTAGCGAGCT...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCACCAAGCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGTCGCCCAACTGCCCCTaGGGGTTCCAGCCAATCCTC +
Preference number: 4 (lower is better)
Translates to: PPSLWLLPGGFGIWAGSLSPNCP*GFQPIL
Trigger: GAGGATTGGCTGGAACCCCCAGGGGCAGTTGGGCGA...CAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACGGCGCCATGCCTCCGTaGCATCCTCCTCATCCCCCT +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHGAMPP*HPPHPP
Trigger: AGGGGGATGAGGAGGATGCCACGGAGGCATGGCGCC...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCGCCTGCTGCAGGCTaGCGCTCACAGTGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPAPAAG*RSQCRA
Trigger: TGCGCGACACTGTGAGCGCCAGCCTGCAGCAGGCGC...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCTCTCGCAGGGCCAGGTaGGCTCCGCGCTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPSRRAR*APRLRR
Trigger: CCTTCGCAAGCGCGGAGCCCACCTGGCCCTGCGAGA...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCTCTTCACTGGTGTATaGGGCCTCAATCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRLFTGV*GLNLRA
Trigger: AGCCCTGAGATTGAGGCCCCATACACCAGTGAAGAG...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCCTGCTCCTCTTCACTaGTGTATGGGGCCTCAATCT +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRPAPLH*CMGPQS
Trigger: AGATTGAGGCCCCATACACCAGTGAAGAGGAGCAGG...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTTCCCTGCCCGCTGGCTaGGCAAGAGAGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHISLPAG*AREASP
Trigger: GGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGA...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGGGACTAGGGTGACTAAGGAGACAGTCCCTGCCCGCTaGCTGGGCAAGAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GAPCRSAYAMPGTRVTKETVPAR*LGKRGQ
Trigger: CTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGT...CTCCTTAGTCACCCTAGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp GGAGAGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCGCAGCAGGTTGTCGGTaGTGCGCTCTGAGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: GEGLKCACVPVQELRRRIAAGCR*CALSPR
Trigger: TCTCGGGCTCAGAGCGCATCACCGACAACCTGCTGC...GATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp GAATGTGTGTGGCCTCATGCTGGTGCAAGGGAGGGAGGAGAGGGGCTCAAATGTTGGGGACTAGCCGGCTaGGGGACCGCAGGGAGACAC +
Preference number: 4 (lower is better)
Translates to: ECVWPHAGAREGGEGLKCWGLAG*GTAGRH
Trigger: GTGTCTCCCTGCGGTCCCTCAGCCGGCTAGTCCCCA...ACATTTGAGCCCCTCTCCTCCCTCCCTTGCACCAGCATGAGGCCACACACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTACCCGGGTCCGCGATTaGCTCATCCGGCGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHITRVRD*LIRRRL
Trigger: AAGGCGGCGCCGGATGAGGCAATCGCGGACCCGGGT...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS-3UTR GCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACAGGACGCACAGAAGGTaGCGGTCACTGCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHRTHRR*RSLPSA
Trigger: GGCAGAGGGCAGTGACCGGCACCTTCTGTGCGTCCT...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
CDS-3UTR GCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCCTGGTGCAGGCGCCATaGCTCCGTGGCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPLVQAP*LRGILL
Trigger: GAGGAGGATGCCACGGAGGCATGGCGCCTGCACCAG...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCCAGTCTGGTGCAGGCGCCATaGCTCCGTGGCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RGSNVPVSLCRSYGGGSSLVQAP*LRGILL
Trigger: GAGGAGGATGCCACGGAGGCATGGCGCCTGCACCAG...ACTGGATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCCTGCGCCAGCTCTTGTaGCGACTGCCGCGTACGAGC +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPLRQLL*RLPRTS
Trigger: GCTCGTACGCGGCAGTCGGCACAAGAGCTGGCGCAG...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCAGGGGCAGGCACCGTaGCGCCCCCATCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFQGQAP*RPHQEA
Trigger: AGCTTCCTGATGGGGGCGGCACGGTGCCTGCCCCTG...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCACAGGGGCAGGCACCGTaGCGCCCCCATCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAQGQAP*RPHQEA
Trigger: AGCTTCCTGATGGGGGCGGCACGGTGCCTGCCCCTG...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TTTGGAATCTGGGCTGGTAGCCTGCTGCCATGCCCATTCCAATGTGAGCCACAGCGCGCACGCGCCTGCTaGAGGCTGGCGCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: FGIWAGSLLPCPFQCEPQRARAC*RLALTV
Trigger: CACTGTGAGCGCCAGCCTGCAGCAGGCGCGTGCGCG...CTGTGGCTCACATTGGAATGGGCATGGCAGCAGGCTACCAGCCCAGATTCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACGTGCCACGAGCTGGTTaGGGGCCAGCAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHVPRAG*GPAGWR
Trigger: TCTCCATCCTGCTGGCCCGCAACCAGCTCGTGGCAC...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCCTTCCCTTTGCACATaGTGGCTCTTCCACTACGAA +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRPSLCT*WLFHYE
Trigger: TTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGG...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTGCGGCGCCGAGGGACTaGTTCTGGGCTCCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIAAPRD*FWAPSP
Trigger: GGGACTAGGAGCCCAGAACCAGTCCCTCGGCGCCGC...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS-3UTR CCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACCTGCGTACACAGACATaGCCACAGCGCAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHLRTQT*PQRRHR
Trigger: GCGGTGCCTGCGCTGTGGCCATGTCTGTGTACGCAG...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
CDS-3UTR CCA 90 bp CCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGACCTGGCTCCATTCCCTaGGCCATTCCTGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PPAAKWKLSALCPGSCGRPGSIP*AIPGVG
Trigger: CCCCACACCAGGAATGGCCCAGGGAATGGAGCCAGG...TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCACCAAGCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGAACATGGCACCCTCCTaGCCCGCACCTGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: PPSLWLLPGGFGIWAGSLNMAPS*PAPGSI
Trigger: AATGGAGCCAGGTGCGGGCCAGGAGGGTGCCATGTT...CAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCGGCGCCATGCCTCCGTaGCATCCTCCTCATCCCCCT +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPGAMPP*HPPHPP
Trigger: AGGGGGATGAGGAGGATGCCACGGAGGCATGGCGCC...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAGCGCCTGCTGCAGGCTaGCGCTCACAGTGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAAPAAG*RSQCRA
Trigger: TGCGCGACACTGTGAGCGCCAGCCTGCAGCAGGCGC...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCACAGTCCCTGCCCGCTaGCTGGGCAAGAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPTVPAR*LGKRGQ
Trigger: CTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGT...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGAGAATTGCTTGAACTaGAGAGGCAGAGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGENCLN*RGRGCS
Trigger: ACTGCAACCTCTGCCTCTCCAGTTCAAGCAATTCTC...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642691.1
3UTR CAA 72 bp AGCACCCACCAAGCCTATGGCTGCTCCCCGGAGGCTTaGGAATCTGGGCTGGTAGCCTGCTGCCATGCCCAT +
Preference number: 4 (lower is better)
Translates to: STHQAYGCSPEA*ESGLVACCHAH
Trigger: ATGGGCATGGCAGCAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCGCAGCAGGTTGTCGGTaGTGCGCTCTGAGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPAAGCR*CALSPR
Trigger: TCTCGGGCTCAGAGCGCATCACCGACAACCTGCTGC...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCTGGGGTCTCGTGCCATaGGCTGCAGCAGGTTGTCGG +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPWGLVP*AAAGCR
Trigger: CCGACAACCTGCTGCAGCTCATGGCACGAGACCCCA...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCAGGACGCACAGAAGGTaGCGGTCACTGCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPRTHRR*RSLPSA
Trigger: GGCAGAGGGCAGTGACCGGCACCTTCTGTGCGTCCT...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
CDS-3UTR GCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCTGCTTCTCTTCCTCTaGATGTCAGTAGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRLLLFL*MSVAIL
Trigger: AAGGATGGCTACTGACATGCAGAGGAAGAGAAGCAG...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGGCTGGTCGCCCAACTaGCCCTGGGGGTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARGWSPN*PWGFQP
Trigger: TGGCTGGAACCCCCAGGGGCAGTTGGGCGACCAGCC...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCTGGTGCAGGCGCCATaGCTCCGTGGCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHILVQAP*LRGILL
Trigger: GAGGAGGATGCCACGGAGGCATGGCGCCTGCACCAG...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCACTGGTGCAGGCGCCATaGCTCCGTGGCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWALVQAP*LRGILL
Trigger: GAGGAGGATGCCACGGAGGCATGGCGCCTGCACCAG...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCAGCTCTTGTGCCGACTaGCGCGTACGAGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFSSCAD*RVRATA
Trigger: GGCGGTGGCTCGTACGCGGCAGTCGGCACAAGAGCT...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTCGCGCACGCGCCTGCTaGAGGCTGGCGCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: VSSPKHFNAFTNPQSLPARARAC*RLALTV
Trigger: CACTGTGAGCGCCAGCCTGCAGCAGGCGCGTGCGCG...AGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCTGGAGAAGACCAGGCTaGGCGCACGCGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFWRRPG*AHAPAA
Trigger: TGCAGCAGGCGCGTGCGCGCAGCCTGGTCTTCTCCA...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCGTGCCACGAGCTGGTTaGGGGCCAGCAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPVPRAG*GPAGWR
Trigger: TCTCCATCCTGCTGGCCCGCAACCAGCTCGTGGCAC...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCTTTCGGCGCACGAGTaGCACGAGCTGGTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHILSAHE*HELVAG
Trigger: GCCCGCAACCAGCTCGTGGCACTCGTGCGCCGAAAG...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGGTGGGCTCCGCGCTTaGGAAGGCGCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARGGLRA*EGAPGS
Trigger: GCTTCCAGGAGCGCCTTCGCAAGCGCGGAGCCCACC...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACGACGCAGGTCAGGGATaGCCACTTGGGCAACGCTGT +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHDAGQG*PLGQRC
Trigger: ACAGCGTTGCCCAAGTGGGCATCCCTGACCTGCGTC...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCAAGCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGCTGGGCGGTCTTCCTCTTTaGGGATCCAGCGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: PSLWLLPGGFGIWAGSLLGGLPL*GSSASA
Trigger: AGCTGATGCGCTGGATCCGCAAAGAGGAAGACCGCC...CAGCAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCACCAAGCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGCCTGGATGTCCATGGTaGCCCATGCAGGTCTGCCTA +
Preference number: 4 (lower is better)
Translates to: PPSLWLLPGGFGIWAGSLPGCPW*PMQVCL
Trigger: TAGGCAGACCTGCATGGGGCACCATGGACATCCAGG...CAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGAGACCCAGGGCATGTGTGCAGGGTGAACAGCACCCACCAAGCCTATGGCTGCAGGCGTGAGCCACCATaGCCGGCCTGTACTAGGTTC +
Preference number: 4 (lower is better)
Translates to: RDPGHVCRVNSTHQAYGCRREPP*PACTRF
Trigger: GAACCTAGTACAGGCCGGGCATGGTGGCTCACGCCT...GCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCGTAGTCCTTAGCGTTTaGCCGCCTGCGGCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFVVLSV*PPAAPR
Trigger: CCTCGGCGCCGCAGGCGGCCAAACGCTAAGGACTAC...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS-3UTR CCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCTCTGCCGGACCCATaGAGGGGTAAGGGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIPLPDP*RGKGVR
Trigger: CCGGACACCCTTACCCCTCCATGGGTCCGGCAGAGG...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
CDS-3UTR CCA 90 bp GGAGAGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCGGGCCATTCCTGGTGTaGGGCTCTCAGCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GEGLKCACVPVQELRRRIGPFLV*GSQLSP
Trigger: TGGAGAGAGCTGAGAGCCCCACACCAGGAATGGCCC...GATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGAGACCCAGGGCATGTGTGCAGGGTGAACAGCACCCACCAAGCCTATGGCTGCAACATGGCACCCTCCTaGCCCGCACCTGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: RDPGHVCRVNSTHQAYGCNMAPS*PAPGSI
Trigger: AATGGAGCCAGGTGCGGGCCAGGAGGGTGCCATGTT...GCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAGGGCATGGACGAACATaGCACCCTCCTGGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAGHGRT*HPPGPH
Trigger: GTGCGGGCCAGGAGGGTGCCATGTTCGTCCATGCCC...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACCTGGTACCCTCCTTGTaGCTGTCCCCAGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHLVPSL*LSPEAA
Trigger: GGCAGCTTCTGGGGACAGCCACAAGGAGGGTACCAG...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGACTGGTACCCTCCTTGTaGCTGTCCCCAGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PPAAKWKLSALCPGSCGRLVPSL*LSPEAA
Trigger: GGCAGCTTCTGGGGACAGCCACAAGGAGGGTACCAG...TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCTCGCCCAACTGCCCCTaGGGGTTCCAGCCAATCCTC +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPSPNCP*GFQPIL
Trigger: GAGGATTGGCTGGAACCCCCAGGGGCAGTTGGGCGA...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCAGGCCAGCCCCCATCTaGAGGCTCCTATGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPRPAPI*RLLWLP
Trigger: GGGAAGCCATAGGAGCCTCCAGATGGGGGCTGGCCT...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCACAGTCCCTGCCCGCTaGCTGGGCAAGAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFTVPAR*LGKRGQ
Trigger: CTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGT...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGACCTCCTGGATGTCCATaGTGCCCCATGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: PPAAKWKLSALCPGSCGRPPGCP*CPMQVC
Trigger: GCAGACCTGCATGGGGCACCATGGACATCCAGGAGG...TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGAGACCCAGGGCATGTGTGCAGGGTGAACAGCACCCACCAAGCCTATGGCTGCCACTGCCGAGCCTCCTaGATGTCCATGGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: RDPGHVCRVNSTHQAYGCHCRAS*MSMVPH
Trigger: ATGGGGCACCATGGACATCCAGGAGGCTCGGCAGTG...GCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGGCAGTTCATTTCAAGTaGGAGAAAGGGACGTTAGGA +
Preference number: 4 (lower is better)
Translates to: THSPCPLAGQERPAPIWRAVHFK*EKGTLG
Trigger: TCCTAACGTCCCTTTCTCTCACTTGAAATGAACTGC...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS-3UTR TCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTGCAGCAGGTTGTCGGTaGTGCGCTCTGAGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIAAGCR*CALSPR
Trigger: TCTCGGGCTCAGAGCGCATCACCGACAACCTGCTGC...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCGCAGCAGGTTGTCGGTaGTGCGCTCTGAGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFAAGCR*CALSPR
Trigger: TCTCGGGCTCAGAGCGCATCACCGACAACCTGCTGC...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCTGGGGTCTCGTGCCATaGGCTGCAGCAGGTTGTCGG +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFWGLVP*AAAGCR
Trigger: CCGACAACCTGCTGCAGCTCATGGCACGAGACCCCA...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACTGTGTCCAGGAAGGCTaGGCCCGCACACATTCCCAT +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHCVQEG*ARTHSH
Trigger: ATGGGAATGTGTGCGGGCTCAGCCTTCCTGGACACA...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCATCACCCGGCCGCCGGTaGAGGAAGATAGCTTTCGCC +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWASPGRR*RKIAFA
Trigger: GGCGAAAGCTATCTTCCTGCACCGGCGGCCGGGTGA...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
CDS-3UTR GCA 90 bp TCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCGAAGGTGCCGGTCACTaGCCTCTGCCGGACCCATGG +
Preference number: 4 (lower is better)
Translates to: SSPKHFNAFTNPQSLPAGEGAGH*PLPDPW
Trigger: CCATGGGTCCGGCAGAGGGCAGTGACCGGCACCTTC...GCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296473.7
CDS-3UTR GCA 90 bp GTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGTCGCCCAACTaGCCCTGGGGGTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VSSPKHFNAFTNPQSLPAGWSPN*PWGFQP
Trigger: TGGCTGGAACCCCCAGGGGCAGTTGGGCGACCAGCC...AGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGGCTGGTCGCCCAACTaGCCCTGGGGGTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLGWSPN*PWGFQP
Trigger: TGGCTGGAACCCCCAGGGGCAGTTGGGCGACCAGCC...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCACCAAGCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGGATGGCGTTCTTGTCTaGCTCCAGGAAGGACACCAG +
Preference number: 4 (lower is better)
Translates to: PPSLWLLPGGFGIWAGSLDGVLV*LQEGHQ
Trigger: CTGGTGTCCTTCCTGGAGGCAGACAAGAACGCCATC...CAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGACTGCGCCAGCTCTTGTaGCGACTGCCGCGTACGAGC +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARLRQLL*RLPRTS
Trigger: GCTCGTACGCGGCAGTCGGCACAAGAGCTGGCGCAG...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGAGAAGCTGGGGTCTCGTaGCATGAGCTGCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PPAAKWKLSALCPGSCGREAGVS*HELQQV
Trigger: AACCTGCTGCAGCTCATGGCACGAGACCCCAGCTTC...TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGCAGGGGCAGGCACCGTaGCGCCCCCATCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLQGQAP*RPHQEA
Trigger: AGCTTCCTGATGGGGGCGGCACGGTGCCTGCCCCTG...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGAGTGATAAGAGAGGCAGACAGCAGAAGCTCAGACTGAATATGGGGGTGGGGGGTGGGCTCCGCGCTTaGGAAGGCGCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RSDKRGRQQKLRLNMGVGGGLRA*EGAPGS
Trigger: GCTTCCAGGAGCGCCTTCGCAAGCGCGGAGCCCACC...CCCCACCCCCATATTCAGTCTGAGCTTCTGCTGTCTGCCTCTCTTATCACTCCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCGTAGGGTGTGCGCAGTaGCTCTCGCAGGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSPKHFNAFTNPQSLPAGVGCAQ*LSQGQV
Trigger: CACCTGGCCCTGCGAGAGGCACTGCGCACACCCTAC...GCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGACGCAGGTCAGGGATaGCCACTTGGGCAACGCTGT +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPDAGQG*PLGQRC
Trigger: ACAGCGTTGCCCAAGTGGGCATCCCTGACCTGCGTC...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ATCCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGACGCAGGTCAGGGATaGCCACTTGGGCAACGCTGT +
Preference number: 4 (lower is better)
Translates to: IPRQQSGSSLHCALGPVVDAGQG*PLGQRC
Trigger: ACAGCGTTGCCCAAGTGGGCATCCCTGACCTGCGTC...TACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCAGCTCTCCTGGCCACTaGCCCCTACCGGATCTCGCC +
Preference number: 4 (lower is better)
Translates to: SSPKHFNAFTNPQSLPAGSSPGH*PLPDLA
Trigger: GGCGAGATCCGGTAGGGGGCAGTGGCCAGGAGAGCT...GCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTAACAGCCCTGGACTCTaGGCCTCTCCGTCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHINSPGL*ASPSEP
Trigger: TGGCTCGGACGGAGAGGCCCAGAGTCCAGGGCTGTT...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS-3UTR CCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCAACAGCCCTGGACTCTaGGCCTCTCCGTCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFNSPGL*ASPSEP
Trigger: TGGCTCGGACGGAGAGGCCCAGAGTCCAGGGCTGTT...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS-3UTR CCA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGTCCCAGCAGAGCCGTaGGCAGGTCCTGACCCGGGT +
Preference number: 4 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLVPAEP*AGPDPG
Trigger: ACCCGGGTCAGGACCTGCCCACGGCTCTGCTGGGAC...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296473.7
CDS-3UTR CCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGACCTCTGCCGGACCCATaGAGGGGTAAGGGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARPLPDP*RGKGVR
Trigger: CCGGACACCCTTACCCCTCCATGGGTCCGGCAGAGG...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
CDS-3UTR CCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCTCCCTGGGCCATTCCTaGTGTGGGGCTCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPSLGHS*CGALSS
Trigger: AGAGCTGAGAGCCCCACACCAGGAATGGCCCAGGGA...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCACCTGGCTCCATTCCCTaGGCCATTCCTGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAPGSIP*AIPGVG
Trigger: CCCCACACCAGGAATGGCCCAGGGAATGGAGCCAGG...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ATCCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTACTGGTACCCTCCTTGTaGCTGTCCCCAGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: IPRQQSGSSLHCALGPVVLVPSL*LSPEAA
Trigger: GGCAGCTTCTGGGGACAGCCACAAGGAGGGTACCAG...TACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACCAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTAGCGGCGGGGGACCCCTaGTACCCTCCTTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TRSFPLHMLALPLRTPSLAAGDP*YPPCGC
Trigger: ACAGCCACAAGGAGGGTACCAGGGGTCCCCCGCCGC...TAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GGAGAGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCGCCACACCCGTCAGCTaGGTGCTTAGCTCGCTAAAG +
Preference number: 4 (lower is better)
Translates to: GEGLKCACVPVQELRRRIATPVS*VLSSLK
Trigger: CTTTAGCGAGCTAAGCACCCAGCTGACGGGTGTGGC...GATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTTCGCCCAACTGCCCCTaGGGGTTCCAGCCAATCCTC +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHISPNCP*GFQPIL
Trigger: GAGGATTGGCTGGAACCCCCAGGGGCAGTTGGGCGA...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCACGAGTGCCACGAGCTaGTTGCGGGCCAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFTSATS*LRASRM
Trigger: CATCCTGCTGGCCCGCAACCAGCTCGTGGCACTCGT...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGGCCAGCCCCCATCTaGAGGCTCCTATGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWARPAPI*RLLWLP
Trigger: GGGAAGCCATAGGAGCCTCCAGATGGGGGCTGGCCT...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTACGGAGGAGGATCCAGTGTCTGTATGTGAGTGAGGGTGGATGGGCGAAGGGAAGGCCAGCCCCCATCTaGAGGCTCCTATGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LRRRIQCLYVSEGGWAKGRPAPI*RLLWLP
Trigger: GGGAAGCCATAGGAGCCTCCAGATGGGGGCTGGCCT...TCCCTTCGCCCATCCACCCTCACTCACATACAGACACTGGATCCTCCTCCGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTACAGTCCCTGCCCGCTaGCTGGGCAAGAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LPQSTLMHSPTHSPCPLATVPAR*LGKRGQ
Trigger: CTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGT...AGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TTTGGAATCTGGGCTGGTAGCCTGCTGCCATGCCCATTCCAATGTGAGCCACAGACAGTCCCTGCCCGCTaGCTGGGCAAGAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: FGIWAGSLLPCPFQCEPQTVPAR*LGKRGQ
Trigger: CTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGT...CTGTGGCTCACATTGGAATGGGCATGGCAGCAGGCTACCAGCCCAGATTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCTCCTTTGAGCTCTCCTaGCCACTGCCCCCTACCGGA +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPSFELS*PLPPTG
Trigger: TCCGGTAGGGGGCAGTGGCCAGGAGAGCTCAAAGGA...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645862.1
CDS-3UTR CCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCCACCCACCAAGCCTATaGCTGCTCCCCGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPHPPSL*LLPGGF
Trigger: AAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGGGTG...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGTGATATACAATCCTTaGCTTCCCAAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGVIYNP*LPKVLG
Trigger: TCCCAACACTTTGGGAAGCCAAGGATTGTATATCAC...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp GGTGGATGGGCGAAGGGACAAGTGACAGAGCTTGACAAGTGTCTTCCCCAAAGCTGGGGTCTCGTGCCATaGGCTGCAGCAGGTTGTCGG +
Preference number: 4 (lower is better)
Translates to: GGWAKGQVTELDKCLPQSWGLVP*AAAGCR
Trigger: CCGACAACCTGCTGCAGCTCATGGCACGAGACCCCA...GCTTTGGGGAAGACACTTGTCAAGCTCTGTCACTTGTCCCTTCGCCCATCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTGCTTATGGATGGCACTaGCGGCTGACGCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIAYGWH*RLTPWS
Trigger: GGACCAAGGCGTCAGCCGTCAGTGCCATCCATAAGC...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAGCTTATGGATGGCACTaGCGGCTGACGCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAAYGWH*RLTPWS
Trigger: GGACCAAGGCGTCAGCCGTCAGTGCCATCCATAAGC...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGATCACCCGGCCGCCGGTaGAGGAAGATAGCTTTCGCC +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARSPGRR*RKIAFA
Trigger: GGCGAAAGCTATCTTCCTGCACCGGCGGCCGGGTGA...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
CDS-3UTR GCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACGATGGCGTTCTTGTCTaGCTCCAGGAAGGACACCAG +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHDGVLV*LQEGHQ
Trigger: CTGGTGTCCTTCCTGGAGGCAGACAAGAACGCCATC...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACTCTCGTGCCATGAGCTaGAGCAGGTTGTCGGTGATG +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHSRAMS*SRLSVM
Trigger: CATCACCGACAACCTGCTGCAGCTCATGGCACGAGA...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGAAGCTGGGGTCTCGTaGCATGAGCTGCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPEAGVS*HELQQV
Trigger: AACCTGCTGCAGCTCATGGCACGAGACCCCAGCTTC...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGTGCCACGAGCTGGTTaGGGGCCAGCAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARVPRAG*GPAGWR
Trigger: TCTCCATCCTGCTGGCCCGCAACCAGCTCGTGGCAC...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCGTGCCACGAGCTGGTTaGGGGCCAGCAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: SSPKHFNAFTNPQSLPAGVPRAG*GPAGWR
Trigger: TCTCCATCCTGCTGGCCCGCAACCAGCTCGTGGCAC...GCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGCTTTCGGCGCACGAGTaGCACGAGCTGGTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLLSAHE*HELVAG
Trigger: GCCCGCAACCAGCTCGTGGCACTCGTGCGCCGAAAG...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTAGTAGGGTGTGCGCAGTaGCTCTCGCAGGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: TRSFPLHMLALPLRTPSLVGCAQ*LSQGQV
Trigger: CACCTGGCCCTGCGAGAGGCACTGCGCACACCCTAC...TAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTGACGCAGGTCAGGGATaGCCACTTGGGCAACGCTGT +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIDAGQG*PLGQRC
Trigger: ACAGCGTTGCCCAAGTGGGCATCCCTGACCTGCGTC...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCCCCAGCAGCCGCTCCTaGTCCTCTTCACTGGTGTAT +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPPSSRS*SSSLVY
Trigger: ATACACCAGTGAAGAGGAGCAGGAGCGGCTGCTGGG...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCGTGGCCTCATGCTGGTaGAAGGGAGGGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SSPKHFNAFTNPQSLPAGVASCW*KGGRRG
Trigger: CCCTCTCCTCCCTCCCTTGCACCAGCATGAGGCCAC...GCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGTGGCCTCATGCTGGTaGAAGGGAGGGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARVASCW*KGGRRG
Trigger: CCCTCTCCTCCCTCCCTTGCACCAGCATGAGGCCAC...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCTGGCAGGCCCACTTCTaGCTTAGAGGGTCAACTGGG +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPWQAHF*LRGSTG
Trigger: CCCAGTTGACCCTCTAAGGCAGAAGTGGGCCTGCCA...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGTCCATGGTGCCCCATaGAGGTCTGCCTATGCCATG +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPVHGAP*RSAYAM
Trigger: CATGGCATAGGCAGACCTGCATGGGGCACCATGGAC...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCCACCAAGCCTATGGCTaGTCCCCGGAGGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPHQAYG*SPEALE
Trigger: TTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTG...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCACCGAGGGACTGGTTCTaGGCTCCTAGTCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAPRDWF*APSPSR
Trigger: TCTGCTGGGACTAGGAGCCCAGAACCAGTCCCTCGG...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS-3UTR CCA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGTAGTCCTTAGCGTTTaGCCGCCTGCGGCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLVVLSV*PPAAPR
Trigger: CCTCGGCGCCGCAGGCGGCCAAACGCTAAGGACTAC...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296473.7
CDS-3UTR CCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAGGGCCATTCCTGGTGTaGGGCTCTCAGCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAGPFLV*GSQLSP
Trigger: TGGAGAGAGCTGAGAGCCCCACACCAGGAATGGCCC...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCATCCCTGGGCCATTCCTaGTGTGGGGCTCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWASLGHS*CGALSS
Trigger: AGAGCTGAGAGCCCCACACCAGGAATGGCCCAGGGA...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AAGTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGGCGGCGGGGGACCCCTaGTACCCTCCTTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KCLPQSTLMHSPTHSPCPAAGDP*YPPCGC
Trigger: ACAGCCACAAGGAGGGTACCAGGGGTCCCCCGCCGC...CGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGAAAGTCCTGGCTGATCTaGCGCATGTCTGTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PPAAKWKLSALCPGSCGRKSWLI*RMSVGS
Trigger: GCTGCCTACAGACATGCGCCAGATCAGCCAGGACTT...TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCCACACCCGTCAGCTaGGTGCTTAGCTCGCTAAAG +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPATPVS*VLSSLK
Trigger: CTTTAGCGAGCTAAGCACCCAGCTGACGGGTGTGGC...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATCCTCAGAGCTTCCTaGCAGCATCTCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHILRAS*QHLLLQ
Trigger: CTGCAGGAGGAGATGCTGCCAGGAAGCTCTGAGGAT...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGAGACCCAGGGCATGTGTGCAGGGTGAACAGCACCCACCAAGCCTATGGCTGCACAAAGACATGCTTCTaGTGCAGGCGCCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: RDPGHVCRVNSTHQAYGCTKTCF*CRRHAS
Trigger: GGAGGCATGGCGCCTGCACCAGAAGCATGTCTTTGT...GCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GGAGAGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCTTCTGCTGGAAGATGTaGCTCAGCTGCGCACCGGTA +
Preference number: 4 (lower is better)
Translates to: GEGLKCACVPVQELRRRIFCWKM*LSCAPV
Trigger: TACCGGTGCGCAGCTGAGCCACATCTTCCAGCAGAA...GATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTATTGCGCCTGCTGCAGGCTaGCGCTCACAGTGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: QVLPFAHAGSSTTNTFPIAPAAG*RSQCRA
Trigger: TGCGCGACACTGTGAGCGCCAGCCTGCAGCAGGCGC...AATAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAACGAGTGCCACGAGCTaGTTGCGGGCCAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARTSATS*LRASRM
Trigger: CATCCTGCTGGCCCGCAACCAGCTCGTGGCACTCGT...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACAGTCCTCACGGTCAGTaGAGACAAGCAGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHSPHGQ*RQAAGR
Trigger: TCTGCCTGCTGCTTGTCTCCACTGACCGTGAGGACT...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGAGACCCAGGGCATGTGTGCAGGGTGAACAGCACCCACCAAGCCTATGGCTGCAGTCCTCACGGTCAGTaGAGACAAGCAGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RDPGHVCRVNSTHQAYGCSPHGQ*RQAAGR
Trigger: TCTGCCTGCTGCTTGTCTCCACTGACCGTGAGGACT...GCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AAGTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGTCTCGCAGGGCCAGGTaGGCTCCGCGCTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: KCLPQSTLMHSPTHSPCPSRRAR*APRLRR
Trigger: CCTTCGCAAGCGCGGAGCCCACCTGGCCCTGCGAGA...CGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AACTACAGCAACCCATTAAACAGAGCCACAGCGAGGGCTCTGAAGGTGGTTGAGTCTCGCAGGGCCAGGTaGGCTCCGCGCTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: NYSNPLNRATARALKVVESRRAR*APRLRR
Trigger: CCTTCGCAAGCGCGGAGCCCACCTGGCCCTGCGAGA...CTCAACCACCTTCAGAGCCCTCGCTGTGGCTCTGTTTAATGGGTTGCTGTAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCGGGCGAGAGGCATTGTaGGCACGACTGTGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPGREAL*ARLCKY
Trigger: GTACTTGCACAGTCGTGCCCACAATGCCTCTCGCCC...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACCAGCGCATCAGCTTATaGATGGCACTGACGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHQRISL*MALTAD
Trigger: GTCAGCCGTCAGTGCCATCCATAAGCTGATGCGCTG...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGACAGCGCATCAGCTTATaGATGGCACTGACGGCTGAC +
Preference number: 4 (lower is better)
Translates to: PPAAKWKLSALCPGSCGRQRISL*MALTAD
Trigger: GTCAGCCGTCAGTGCCATCCATAAGCTGATGCGCTG...TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCCTGGATGTCCATGGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGGGACTCAGCGCATCAGCTTATaGATGGCACTGACGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LLDVHGAPCRSAYAMPGTQRISL*MALTAD
Trigger: GTCAGCCGTCAGTGCCATCCATAAGCTGATGCGCTG...AGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACCATGGACATCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCTCTGGCTCCATTCCCTaGGCCATTCCTGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFSGSIP*AIPGVG
Trigger: CCCCACACCAGGAATGGCCCAGGGAATGGAGCCAGA...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455683.6
CDS-3UTR CCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACTTGAGTAGTCTTTTGTaGCATGCAGCAGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHLSSLL*HAAGGP
Trigger: GGGGCCCCCTGCTGCATGCCACAAAAGACTACTCAA...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGAGACCCAGGGCATGTGTGCAGGGTGAACAGCACCCACCAAGCCTATGGCTGCTTGAGTAGTCTTTTGTaGCATGCAGCAGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RDPGHVCRVNSTHQAYGCLSSLL*HAAGGP
Trigger: GGGGCCCCCTGCTGCATGCCACAAAAGACTACTCAA...GCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCCCCCCGGCAGCAAAGTaGAAGCTCTCTGCATTGTGC +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPPPAAK*KLSALC
Trigger: GCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
59% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGACAGGGACAGCTGGCTTaGCATCACCCAGGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARQGQLA*HHPGPR
Trigger: TCTGGGGCCTGGGTGATGCCAAGCCAGCTGTCCCTG...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCAGAGCGAGACTCTaGCCACTGCCCCCTACCGGA +
Preference number: 4 (lower is better)
Translates to: VSSPKHFNAFTNPQSLPAGRARL*PLPPTG
Trigger: TCCGGTAGGGGGCAGTGGCCAGAGTCTCGCTCTGCC...AGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642691.1
CDS-3UTR TCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGCTGCCCCATCCTCTaGCTCAGTCAGGTCCTCGTA +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWASCPIL*LSQVLV
Trigger: TACGAGGACCTGACTGAGTCAGAGGATGGGGCAGCT...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCCAATCTCAGGGCTGGTaGAGAGTCCCGAGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPQSQGW*RVPSSL
Trigger: CAAAGAGCTCGGGACTCTTCACCAGCCCTGAGATTG...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGCTTATGGATGGCACTaGCGGCTGACGCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARAYGWH*RLTPWS
Trigger: GGACCAAGGCGTCAGCCGTCAGTGCCATCCATAAGC...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTTGTGTCCAGGAAGGCTaGGCCCGCACACATTCCCAT +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHICVQEG*ARTHSH
Trigger: ATGGGAATGTGTGCGGGCTCAGCCTTCCTGGACACA...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCATGTGTCCAGGAAGGCTaGGCCCGCACACATTCCCAT +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWACVQEG*ARTHSH
Trigger: ATGGGAATGTGTGCGGGCTCAGCCTTCCTGGACACA...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTGAGGTTGCAGTGAGCTaGGATCGCACTGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIEVAVS*DRTAAL
Trigger: GAGTGCAGCAGTGCGATCTCAGCTCACTGCAACCTC...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417270.1
CDS-3UTR TCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGGCAGAGGTTGCAGTaGGCTGAGATCGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWARQRLQ*AEIALL
Trigger: CAGCAGTGCGATCTCAGCTCACTGCAACCTCTGCCT...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417270.1
CDS-3UTR TCA 90 bp AGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCCAGTCTTCATGGGAAGGCCTaGGCAGGGACAGTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RGSNVPVSLCRSYGGGSSLHGKA*AGTVSS
Trigger: TGAGGAAACTGTCCCTGCTCAGGCCTTCCCATGAAG...ACTGGATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp TTTGGAATCTGGGCTGGTAGCCTGCTGCCATGCCCATTCCAATGTGAGCCACAGGGCATGTGTGCAGGGTaGACAGCACCCACCAAGCCT +
Preference number: 4 (lower is better)
Translates to: FGIWAGSLLPCPFQCEPQGMCAG*TAPTKP
Trigger: AGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCC...CTGTGGCTCACATTGGAATGGGCATGGCAGCAGGCTACCAGCCCAGATTCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGCGCCAGCTCTTGTaGCGACTGCCGCGTACGAGC +
Preference number: 4 (lower is better)
Translates to: KCLPQSTLMHSPTHSPCPLRQLL*RLPRTS
Trigger: GCTCGTACGCGGCAGTCGGCACAAGAGCTGGCGCAG...CGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCTCTCGTGCCATGAGCTaGAGCAGGTTGTCGGTGATG +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPSRAMS*SRLSVM
Trigger: CATCACCGACAACCTGCTGCAGCTCATGGCACGAGA...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCGAAGCTGGGGTCTCGTaGCATGAGCTGCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFEAGVS*HELQQV
Trigger: AACCTGCTGCAGCTCATGGCACGAGACCCCAGCTTC...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGAGACCCAGGGCATGTGTGCAGGGTGAACAGCACCCACCAAGCCTATGGCTGCTGCAGGTCGATGGGGTaGAGAAATTGGTCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: RDPGHVCRVNSTHQAYGCCRSMG*RNWSFR
Trigger: CCGAAAGGACCAATTTCTGCACCCCATCGACCTGCA...GCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGTGGAAGAAGCCGGCTaGGTTGAATTTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPVEEAG*VEFGQA
Trigger: TGCCTGCCCAAATTCAACGCAGCCGGCTTCTTCCAC...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCGGCAGTCAGAGACTaGAAAGAAGTCCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPAAVRD*KEVLTV
Trigger: GACCGTGAGGACTTCTTTGCAGTCTCTGACTGCCGC...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGACGCAGGTCAGGGATaGCCACTTGGGCAACGCTGT +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARDAGQG*PLGQRC
Trigger: ACAGCGTTGCCCAAGTGGGCATCCCTGACCTGCGTC...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCGGCGGTCTTCCTCTTTaGGGATCCAGCGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFGGLPL*GSSASA
Trigger: AGCTGATGCGCTGGATCCGCAAAGAGGAAGACCGCC...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAGGCGGTCTTCCTCTTTaGGGATCCAGCGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAGGLPL*GSSASA
Trigger: AGCTGATGCGCTGGATCCGCAAAGAGGAAGACCGCC...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTGCACTCCAGCTTGGGTaGCAGAGCAGACCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIALQLG*QSRPCF
Trigger: GAAACAGGGTCTGCTCTGGCACCCAAGCTGGAGTGC...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417270.1
CDS-3UTR GCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACAAGCTCTCTGCATTGTaGCCTGGGTCCTGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHKLSAL*PGSCGR
Trigger: TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTT...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGACACACAGAACAGCCCTaGACTCTGGGCCTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARHTEQP*TLGLSV
Trigger: GACGGAGAGGCCCAGAGTCCAGGGCTGTTCTGTGTG...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS-3UTR CCA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGCTGCGTACACAGACATaGCCACAGCGCAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLLRTQT*PQRRHR
Trigger: GCGGTGCCTGCGCTGTGGCCATGTCTGTGTACGCAG...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296473.7
CDS-3UTR CCA 90 bp AAGTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCCTCTGCCGGACCCATaGAGGGGTAAGGGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: KCLPQSTLMHSPTHSPCPPLPDP*RGKGVR
Trigger: CCGGACACCCTTACCCCTCCATGGGTCCGGCAGAGG...CGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296473.7
CDS-3UTR CCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAAACATGGCACCCTCCTaGCCCGCACCTGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARNMAPS*PAPGSI
Trigger: AATGGAGCCAGGTGCGGGCCAGGAGGGTGCCATGTT...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCAAGTCCTGGCTGATCTaGCGCATGTCTGTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPKSWLI*RMSVGS
Trigger: GCTGCCTACAGACATGCGCCAGATCAGCCAGGACTT...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACAGCTCGCTAAAGTCCTaGCTGATCTGGCGCATGTCT +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHSSLKS*LIWRMS
Trigger: AGACATGCGCCAGATCAGCCAGGACTTTAGCGAGCT...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TCACTGTTGACCAGAATGCCAGTAACAATCAGGGACAGCTGGCTTGGCATCACCGGCGCCATGCCTCCGTaGCATCCTCCTCATCCCCCT +
Preference number: 4 (lower is better)
Translates to: SLLTRMPVTIRDSWLGITGAMPP*HPPHPP
Trigger: AGGGGGATGAGGAGGATGCCACGGAGGCATGGCGCC...GGTGATGCCAAGCCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCACAAAGACATGCTTCTaGTGCAGGCGCCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPTKTCF*CRRHAS
Trigger: GGAGGCATGGCGCCTGCACCAGAAGCATGTCTTTGT...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGACGAGTGCCACGAGCTaGTTGCGGGCCAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLTSATS*LRASRM
Trigger: CATCCTGCTGGCCCGCAACCAGCTCGTGGCACTCGT...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACCAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTAACGAGTGCCACGAGCTaGTTGCGGGCCAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: TRSFPLHMLALPLRTPSLTSATS*LRASRM
Trigger: CATCCTGCTGGCCCGCAACCAGCTCGTGGCACTCGT...TAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGAGTGATAAGAGAGGCAGACAGCAGAAGCTCAGACTGAATATGGGGGTGGGGACGAGTGCCACGAGCTaGTTGCGGGCCAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: RSDKRGRQQKLRLNMGVGTSATS*LRASRM
Trigger: CATCCTGCTGGCCCGCAACCAGCTCGTGGCACTCGT...CCCCACCCCCATATTCAGTCTGAGCTTCTGCTGTCTGCCTCTCTTATCACTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGGGACTAGGGTGACTAAGGAGATGGGGTGCAGAAATTaGTCCTTTCGGCGCACGAGT +
Preference number: 4 (lower is better)
Translates to: GAPCRSAYAMPGTRVTKEMGCRN*SFRRTS
Trigger: ACTCGTGCGCCGAAAGGACCAATTTCTGCACCCCAT...CTCCTTAGTCACCCTAGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCAGGTGCAGGTCGATaGGGTGCAGAAATTGGTCCT +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPAGAGR*GAEIGP
Trigger: AGGACCAATTTCTGCACCCCATCGACCTGCACCTGC...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACCTCTTCACTGGTGTATaGGGCCTCAATCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHLFTGV*GLNLRA
Trigger: AGCCCTGAGATTGAGGCCCCATACACCAGTGAAGAG...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCCCAGGAGGTTCTCGTTaGGGCCCGTGTAGTAAATGG +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPPGGSR*GPCSKW
Trigger: CCATTTACTACACGGGCCCCAACGAGAACCTCCTGG...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GGAGAGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCATCTGGAGGCTCCTATaGCTTCCCACACCTAGTGTG +
Preference number: 4 (lower is better)
Translates to: GEGLKCACVPVQELRRRIIWRLL*LPTPSV
Trigger: CACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT...GATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GAGGGCCGAGTGCACGTAGCAGTATTAGCTCTTATTATGGCAGGCCCACTTCTGAGGCCAGCCCCCATCTaGAGGCTCCTATGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: EGRVHVAVLALIMAGPLLRPAPI*RLLWLP
Trigger: GGGAAGCCATAGGAGCCTCCAGATGGGGGCTGGCCT...CAGAAGTGGGCCTGCCATAATAAGAGCTAATACTGCTACGTGCACTCGGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCATGTGTGGCCTCATGCTaGTGCAAGGGAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWACVASC*CKGGRR
Trigger: TCTCCTCCCTCCCTTGCACCAGCATGAGGCCACACA...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TTTGGAATCTGGGCTGGTAGCCTGCTGCCATGCCCATTCCAATGTGAGCCACAGCACTGCCGAGCCTCCTaGATGTCCATGGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: FGIWAGSLLPCPFQCEPQHCRAS*MSMVPH
Trigger: ATGGGGCACCATGGACATCCAGGAGGCTCGGCAGTG...CTGTGGCTCACATTGGAATGGGCATGGCAGCAGGCTACCAGCCCAGATTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTCAGGGACAGCTGGCTTaGCATCACCCAGGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VSSPKHFNAFTNPQSLPAQGQLA*HHPGPR
Trigger: TCTGGGGCCTGGGTGATGCCAAGCCAGCTGTCCCTG...AGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAAGCTGCCCCATCCTCTaGCTCAGTCAGGTCCTCGTA +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARSCPIL*LSQVLV
Trigger: TACGAGGACCTGACTGAGTCAGAGGATGGGGCAGCT...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AACTACAGCAACCCATTAAACAGAGCCACAGCGAGGGCTCTGAAGGTGGTTGAGGCAGCAGGTTGTCGGTaGTGCGCTCTGAGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: NYSNPLNRATARALKVVEAAGCR*CALSPR
Trigger: TCTCGGGCTCAGAGCGCATCACCGACAACCTGCTGC...CTCAACCACCTTCAGAGCCCTCGCTGTGGCTCTGTTTAATGGGTTGCTGTAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCAATCTCAGGGCTGGTaGAGAGTCCCGAGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFQSQGW*RVPSSL
Trigger: CAAAGAGCTCGGGACTCTTCACCAGCCCTGAGATTG...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CCACCAAGCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGACAAGTGACAGAGCTTaGCAAGTGTCTTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: PPSLWLLPGGFGIWAGSLTSDRA*QVSSPK
Trigger: CTTTGGGGAAGACACTTGTCAAGCTCTGTCACTTGT...CAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp GAATGTGTGTGGCCTCATGCTGGTGCAAGGGAGGGAGGAGAGGGGCTCAAATGTCCACAGCGAGGGCTCTaGAGGTGGTTGAGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: ECVWPHAGAREGGEGLKCPQRGL*RWLSSL
Trigger: AAGACTACTCAACCACCTTCAGAGCCCTCGCTGTGG...ACATTTGAGCCCCTCTCCTCCCTCCCTTGCACCAGCATGAGGCCACACACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCCAGTCCCTCAGCTCACTCTTaGGGACCATTTGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: RGSNVPVSLCRSYGGGSSPSAHS*GPFGGM
Trigger: CATTCCTCCAAATGGTCCTCAAGAGTGAGCTGAGGG...ACTGGATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AAGTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGTGCCAGGGACTAGGGTaGCTAAGGAGGGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: KCLPQSTLMHSPTHSPCPCQGLG*LRRAEC
Trigger: GCACTCGGCCCTCCTTAGTCACCCTAGTCCCTGGCA...CGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACCAGAAGGAGTCAATGTaGCATCAAGGCATTCGCTGC +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHQKESM*HQGIRC
Trigger: GCAGCGAATGCCTTGATGGCACATTGACTCCTTCTG...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCTACCTTGTAGCCATCTaGATGGATGGAGCGGATGGC +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPYLVAI*MDGADG
Trigger: GCCATCCGCTCCATCCATGCAGATGGCTACAAGGTA...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCAAGATGTGGCTCAGCTaGGCACCGGTAAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPKMWLS*APVRRL
Trigger: AAGCCTTCTTACCGGTGCGCAGCTGAGCCACATCTT...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCAGGTTGAAGAGCAGGTaGAGGTCGATGGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFRLKSR*RSMGCR
Trigger: TCTGCACCCCATCGACCTGCACCTGCTCTTCAACCT...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGACTGAGATCGCACTGCTaGACTCCAGCTTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARLRSHC*TPAWVP
Trigger: TGGCACCCAAGCTGGAGTGCAGCAGTGCGATCTCAG...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417270.1
CDS-3UTR GCA 90 bp GAGGGCCGAGTGCACGTAGCAGTATTAGCTCTTATTATGGCAGGCCCACTTCTGGTGCCTGTGTCCCTGTaGAGGAGCTACGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: EGRVHVAVLALIMAGPLLVPVSL*RSYGGG
Trigger: TCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCAC...CAGAAGTGGGCCTGCCATAATAAGAGCTAATACTGCTACGTGCACTCGGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTATGCCCCATGCAGGTCTaGCTATGCCATGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: TRSFPLHMLALPLRTPSLCPMQV*LCHARD
Trigger: GTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCA...TAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGTCCATGGTGCCCCATaGAGGTCTGCCTATGCCATG +
Preference number: 4 (lower is better)
Translates to: LPQSTLMHSPTHSPCPLAVHGAP*RSAYAM
Trigger: CATGGCATAGGCAGACCTGCATGGGGCACCATGGAC...AGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTGGTAGCCTGCTGCCATaGCCATTCCAATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIGSLLP*PFQCEP
Trigger: TGGCTCACATTGGAATGGGCATGGCAGCAGGCTACC...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGGGACTAGGGTGACTAAGGAGCCTTCCCTTTGCACATaGTGGCTCTTCCACTACGAA +
Preference number: 4 (lower is better)
Translates to: GAPCRSAYAMPGTRVTKEPSLCT*WLFHYE
Trigger: TTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGG...CTCCTTAGTCACCCTAGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGCACACAGAACAGCCCTaGACTCTGGGCCTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLHTEQP*TLGLSV
Trigger: GACGGAGAGGCCCAGAGTCCAGGGCTGTTCTGTGTG...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296473.7
CDS-3UTR CCA 90 bp GTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTCCGAGGGACTGGTTCTaGGCTCCTAGTCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VSSPKHFNAFTNPQSLPAPRDWF*APSPSR
Trigger: TCTGCTGGGACTAGGAGCCCAGAACCAGTCCCTCGG...AGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296473.7
CDS-3UTR CCA 90 bp AACTACAGCAACCCATTAAACAGAGCCACAGCGAGGGCTCTGAAGGTGGTTGAGCCTGGCTCCATTCCCTaGGCCATTCCTGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: NYSNPLNRATARALKVVEPGSIP*AIPGVG
Trigger: CCCCACACCAGGAATGGCCCAGGGAATGGAGCCAGG...CTCAACCACCTTCAGAGCCCTCGCTGTGGCTCTGTTTAATGGGTTGCTGTAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GTGTACCCTGGGTCCATGTCACCCACACAGGCTCATTCTTCAATATGGCTTGATGGGCATGGACGAACATaGCACCCTCCTGGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: VYPGSMSPTQAHSSIWLDGHGRT*HPPGPH
Trigger: GTGCGGGCCAGGAGGGTGCCATGTTCGTCCATGCCC...ATCAAGCCATATTGAAGAATGAGCCTGTGTGGGTGACATGGACCCAGGGTACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAAGTCCTGGCTGATCTaGCGCATGTCTGTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAKSWLI*RMSVGS
Trigger: GCTGCCTACAGACATGCGCCAGATCAGCCAGGACTT...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGCCACACCCGTCAGCTaGGTGCTTAGCTCGCTAAAG +
Preference number: 4 (lower is better)
Translates to: LPQSTLMHSPTHSPCPLAATPVS*VLSSLK
Trigger: CTTTAGCGAGCTAAGCACCCAGCTGACGGGTGTGGC...AGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TCACTGTTGACCAGAATGCCAGTAACAATCAGGGACAGCTGGCTTGGCATCACCTCGCCCAACTGCCCCTaGGGGTTCCAGCCAATCCTC +
Preference number: 4 (lower is better)
Translates to: SLLTRMPVTIRDSWLGITSPNCP*GFQPIL
Trigger: GAGGATTGGCTGGAACCCCCAGGGGCAGTTGGGCGA...GGTGATGCCAAGCCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTACAAAGACATGCTTCTaGTGCAGGCGCCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHITKTCF*CRRHAS
Trigger: GGAGGCATGGCGCCTGCACCAGAAGCATGTCTTTGT...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCATGGATGGAGCGGATaGCGTTCTTGTCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIHGWSG*RSCLPP
Trigger: TGGAGGCAGACAAGAACGCCATCCGCTCCATCCATG...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCTTCTGCTGGAAGATGTaGCTCAGCTGCGCACCGGTA +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFFCWKM*LSCAPV
Trigger: TACCGGTGCGCAGCTGAGCCACATCTTCCAGCAGAA...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCCAGTATGGGGTGCAGAAATTaGTCCTTTCGGCGCACGAGT +
Preference number: 4 (lower is better)
Translates to: RGSNVPVSLCRSYGGGSSMGCRN*SFRRTS
Trigger: ACTCGTGCGCCGAAAGGACCAATTTCTGCACCCCAT...ACTGGATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAGCAGGTGCAGGTCGATaGGGTGCAGAAATTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAAGAGR*GAEIGP
Trigger: AGGACCAATTTCTGCACCCCATCGACCTGCACCTGC...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGTCCTCACGGTCAGTaGAGACAAGCAGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWASPHGQ*RQAAGR
Trigger: TCTGCCTGCTGCTTGTCTCCACTGACCGTGAGGACT...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTAGTCCTCACGGTCAGTaGAGACAAGCAGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHISPHGQ*RQAAGR
Trigger: TCTGCCTGCTGCTTGTCTCCACTGACCGTGAGGACT...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCCTCTTCACTGGTGTATaGGGCCTCAATCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPLFTGV*GLNLRA
Trigger: AGCCCTGAGATTGAGGCCCCATACACCAGTGAAGAG...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGGGCGAGAGGCATTGTaGGCACGACTGTGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARGREAL*ARLCKY
Trigger: GTACTTGCACAGTCGTGCCCACAATGCCTCTCGCCC...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCTACCTTGTAGCCATCTaGCTCCATTCCCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPYLVAI*LHSLGH
Trigger: ATGGCCCAGGGAATGGAGCCAGATGGCTACAAGGTA...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455683.6
CDS-3UTR CCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGACCCCCGGCAGCAAAGTaGAAGCTCTCTGCATTGTGC +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARPPAAK*KLSALC
Trigger: GCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCCAGTTGTTCCAGTGTACCCTaGGTCCATGTCACCCACACA +
Preference number: 4 (lower is better)
Translates to: RGSNVPVSLCRSYGGGSSCSSVP*VHVTHT
Trigger: TGTGTGGGTGACATGGACCCAGGGTACACTGGAACA...ACTGGATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACCAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTACACCCACCAAGCCTATaGCTGCTCCCCGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: TRSFPLHMLALPLRTPSLHPPSL*LLPGGF
Trigger: AAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGGGTG...TAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ATCCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAAGGCCCCAGAGGCAGTaGTTTGGTGTTCTTACTAGG +
Preference number: 4 (lower is better)
Translates to: IPRQQSGSSLHCALGPVVRPQRQ*FGVLTR
Trigger: CCTAGTAAGAACACCAAACCACTGCCTCTGGGGCCT...TACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GGTGGATGGGCGAAGGGACAAGTGACAGAGCTTGACAAGTGTCTTCCCCAAAGCACAATCAGGGACAGCTaGCTTGGCATCACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GGWAKGQVTELDKCLPQSTIRDS*LGITQA
Trigger: GGCCTGGGTGATGCCAAGCCAGCTGTCCCTGATTGT...GCTTTGGGGAAGACACTTGTCAAGCTCTGTCACTTGTCCCTTCGCCCATCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CAA 72 bp GAAGATCCCCCGGCAGCAAAGTGGAAGCTCTCTGCATaGTGCCCTGGGTCCTGTGGTAGAGTAAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: EDPPAAKWKLSA*CPGSCGRVNGA
Trigger: AGCCCCATTTACTCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGGATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AGGAGTGATAAGAGAGGCAGACAGCAGAAGCTCAGACTGAATATGGGGGTGGGGAGCTGCCCCATCCTCTaGCTCAGTCAGGTCCTCGTA +
Preference number: 4 (lower is better)
Translates to: RSDKRGRQQKLRLNMGVGSCPIL*LSQVLV
Trigger: TACGAGGACCTGACTGAGTCAGAGGATGGGGCAGCT...CCCCACCCCCATATTCAGTCTGAGCTTCTGCTGTCTGCCTCTCTTATCACTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGAGTCCCGAGCTCTTTaGCTTATAGAGGAAGTGACG +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPESRAL*LIEEVT
Trigger: CGTCACTTCCTCTATAAGTCAAAGAGCTCGGGACTC...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCGAGTCCCGAGCTCTTTaGCTTATAGAGGAAGTGACG +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPESRAL*LIEEVT
Trigger: CGTCACTTCCTCTATAAGTCAAAGAGCTCGGGACTC...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGACAATCTCAGGGCTGGTaGAGAGTCCCGAGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARQSQGW*RVPSSL
Trigger: CAAAGAGCTCGGGACTCTTCACCAGCCCTGAGATTG...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp GGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGGGACTAGGGTGACTAAGGAGTGTAGTAAATGGTCTTaGGTGGGCGAGAGGCATTGT +
Preference number: 4 (lower is better)
Translates to: GAPCRSAYAMPGTRVTKECSKWS*VGERHC
Trigger: ACAATGCCTCTCGCCCACTCAAGACCATTTACTACA...CTCCTTAGTCACCCTAGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGTGTGTCCAGGAAGGCTaGGCCCGCACACATTCCCAT +
Preference number: 4 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLCVQEG*ARTHSH
Trigger: ATGGGAATGTGTGCGGGCTCAGCCTTCCTGGACACA...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AGAGACCCAGGGCATGTGTGCAGGGTGAACAGCACCCACCAAGCCTATGGCTGCATTCTGAATTTCAGCTaGAGACTGGGTTGCCTCACC +
Preference number: 4 (lower is better)
Translates to: RDPGHVCRVNSTHQAYGCILNFS*RLGCLT
Trigger: GGTGAGGCAACCCAGTCTTCAGCTGAAATTCAGAAT...GCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACAGGGAGACTGGATTCTaGATTTCAGCTGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHRETGF*ISAEDW
Trigger: CCAGTCTTCAGCTGAAATTCAGAATCCAGTCTCCCT...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp ATCCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGACAGGAGAATTGCTTaGACTGGAGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: IPRQQSGSSLHCALGPVVDRRIA*TGEAEV
Trigger: AACCTCTGCCTCTCCAGTTCAAGCAATTCTCCTGTC...TACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642691.1
CDS-3UTR GCA 90 bp GGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGGGACTAGGGTGACTAAGGAGCTGCTTCTCTTCCTCTaGATGTCAGTAGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: GAPCRSAYAMPGTRVTKELLLFL*MSVAIL
Trigger: AAGGATGGCTACTGACATGCAGAGGAAGAGAAGCAG...CTCCTTAGTCACCCTAGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACCATCAAGGCATTCGCTaGTTCTCTTCCTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHHQGIR*FSSSAC
Trigger: ACATGCAGAGGAAGAGAAGCAGCGAATGCCTTGATG...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCTCAGCACAAAGACATaGTTCTGGTGCAGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFLSTKT*FWCRRH
Trigger: ATGGCGCCTGCACCAGAAGCATGTCTTTGTGCTGAG...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTACGGAGGAGGATCCAGTGTCTGTATGTGAGTGAGGGTGGATGGGCGAAGGGACTCAGCACAAAGACATaGTTCTGGTGCAGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: LRRRIQCLYVSEGGWAKGLSTKT*FWCRRH
Trigger: ATGGCGCCTGCACCAGAAGCATGTCTTTGTGCTGAG...TCCCTTCGCCCATCCACCCTCACTCACATACAGACACTGGATCCTCCTCCGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAGTACACAGGCTTCCCTaGCTCACTCAGCACAAAGAC +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAVHRLP*LTQHKD
Trigger: GTCTTTGTGCTGAGTGAGGCAGGGAAGCCTGTGTAC...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCATAGTGCTGGAAAGTaGCTCCTCAGACCCATAGCG +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIHSAGK*LLRPIA
Trigger: CGCTATGGGTCTGAGGAGGCACTTTCCAGCACTATG...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GAATGTGTGTGGCCTCATGCTGGTGCAAGGGAGGGAGGAGAGGGGCTCAAATGTCATAGTGCTGGAAAGTaGCTCCTCAGACCCATAGCG +
Preference number: 4 (lower is better)
Translates to: ECVWPHAGAREGGEGLKCHSAGK*LLRPIA
Trigger: CGCTATGGGTCTGAGGAGGCACTTTCCAGCACTATG...ACATTTGAGCCCCTCTCCTCCCTCCCTTGCACCAGCATGAGGCCACACACATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTTACCTTGTAGCCATCTaGATGGATGGAGCGGATGGC +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIYLVAI*MDGADG
Trigger: GCCATCCGCTCCATCCATGCAGATGGCTACAAGGTA...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAAGATGTGGCTCAGCTaGGCACCGGTAAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAKMWLS*APVRRL
Trigger: AAGCCTTCTTACCGGTGCGCAGCTGAGCCACATCTT...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGATCTCGTGCCATGAGCTaGAGCAGGTTGTCGGTGATG +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARSRAMS*SRLSVM
Trigger: CATCACCGACAACCTGCTGCAGCTCATGGCACGAGA...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGAAGCTGGGGTCTCGTaGCATGAGCTGCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLEAGVS*HELQQV
Trigger: AACCTGCTGCAGCTCATGGCACGAGACCCCAGCTTC...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGAGTGATAAGAGAGGCAGACAGCAGAAGCTCAGACTGAATATGGGGGTGGGGGAAGCTGGGGTCTCGTaGCATGAGCTGCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: RSDKRGRQQKLRLNMGVGEAGVS*HELQQV
Trigger: AACCTGCTGCAGCTCATGGCACGAGACCCCAGCTTC...CCCCACCCCCATATTCAGTCTGAGCTTCTGCTGTCTGCCTCTCTTATCACTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GCGAAGGGACAAGTGACAGAGCTTGACAAGTGTCTTCCCCAAAGCACTTTAATGCTTTCGGCGCACGAGTaGCACGAGCTGGTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: AKGQVTELDKCLPQSTLMLSAHE*HELVAG
Trigger: GCCCGCAACCAGCTCGTGGCACTCGTGCGCCGAAAG...CATTAAAGTGCTTTGGGGAAGACACTTGTCAAGCTCTGTCACTTGTCCCTTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCATGCAGGTCGATGGGGTaGAGAAATTGGTCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWACRSMG*RNWSFR
Trigger: CCGAAAGGACCAATTTCTGCACCCCATCGACCTGCA...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTTGCAGGTCGATGGGGTaGAGAAATTGGTCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHICRSMG*RNWSFR
Trigger: CCGAAAGGACCAATTTCTGCACCCCATCGACCTGCA...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTAGGTTGAAGAGCAGGTaGAGGTCGATGGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LPQSTLMHSPTHSPCPLARLKSR*RSMGCR
Trigger: TCTGCACCCCATCGACCTGCACCTGCTCTTCAACCT...AGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAAGGTTGAAGAGCAGGTaGAGGTCGATGGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARRLKSR*RSMGCR
Trigger: TCTGCACCCCATCGACCTGCACCTGCTCTTCAACCT...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCGTGGAAGAAGCCGGCTaGGTTGAATTTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSPKHFNAFTNPQSLPAGVEEAG*VEFGQA
Trigger: TGCCTGCCCAAATTCAACGCAGCCGGCTTCTTCCAC...GCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTAATGTGTGTGGCCTCATaGTGGTGCAAGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TRSFPLHMLALPLRTPSLMCVAS*WCKGGR
Trigger: CCTCCCTCCCTTGCACCAGCATGAGGCCACACACAT...TAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GAATGTGTGTGGCCTCATGCTGGTGCAAGGGAGGGAGGAGAGGGGCTCAAATGTAAGCTCTCTGCATTGTaGCCTGGGTCCTGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: ECVWPHAGAREGGEGLKCKLSAL*PGSCGR
Trigger: TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTT...ACATTTGAGCCCCTCTCCTCCCTCCCTTGCACCAGCATGAGGCCACACACATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGGTAGCCTGCTGCCATaGCCATTCCAATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARGSLLP*PFQCEP
Trigger: TGGCTCACATTGGAATGGGCATGGCAGCAGGCTACC...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGGCTGGTAGCCTGCTaGCATGCCCATTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: VSSPKHFNAFTNPQSLPAGLVAC*HAHSNV
Trigger: CACATTGGAATGGGCATGGCAGCAGGCTACCAGCCC...AGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTATTTCCCTGGGCCATTCCTaGTGTGGGGCTCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QVLPFAHAGSSTTNTFPISLGHS*CGALSS
Trigger: AGAGCTGAGAGCCCCACACCAGGAATGGCCCAGGGA...AATAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTAGCTCGCTAAAGTCCTaGCTGATCTGGCGCATGTCT +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHISSLKS*LIWRMS
Trigger: AGACATGCGCCAGATCAGCCAGGACTTTAGCGAGCT...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAATCCTCAGAGCTTCCTaGCAGCATCTCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARILRAS*QHLLLQ
Trigger: CTGCAGGAGGAGATGCTGCCAGGAAGCTCTGAGGAT...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTAGCCATCTGCATGGATaGAGCGGATGGCGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHISHLHG*SGWRSC
Trigger: ACAAGAACGCCATCCGCTCCATCCATGCAGATGGCT...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTACGGAGGAGGATCCAGTGTCTGTATGTGAGTGAGGGTGGATGGGCGAAGGGAAGCCATCTGCATGGATaGAGCGGATGGCGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LRRRIQCLYVSEGGWAKGSHLHG*SGWRSC
Trigger: ACAAGAACGCCATCCGCTCCATCCATGCAGATGGCT...TCCCTTCGCCCATCCACCCTCACTCACATACAGACACTGGATCCTCCTCCGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTTCTGCTGGAAGATGTaGCTCAGCTGCGCACCGGTA +
Preference number: 4 (lower is better)
Translates to: SSPKHFNAFTNPQSLPAGFCWKM*LSCAPV
Trigger: TACCGGTGCGCAGCTGAGCCACATCTTCCAGCAGAA...GCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCATGGGGTGCAGAAATTaGTCCTTTCGGCGCACGAGT +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFMGCRN*SFRRTS
Trigger: ACTCGTGCGCCGAAAGGACCAATTTCTGCACCCCAT...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCAGTCCTCACGGTCAGTaGAGACAAGCAGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SSPKHFNAFTNPQSLPAGSPHGQ*RQAAGR
Trigger: TCTGCCTGCTGCTTGTCTCCACTGACCGTGAGGACT...GCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCTGCTCCTCTTCACTaGTGTATGGGGCCTCAATCT +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIPAPLH*CMGPQS
Trigger: AGATTGAGGCCCCATACACCAGTGAAGAGGAGCAGG...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGGCGAGAGGCATTGTaGGCACGACTGTGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: VSSPKHFNAFTNPQSLPAGREAL*ARLCKY
Trigger: GTACTTGCACAGTCGTGCCCACAATGCCTCTCGCCC...AGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCGTAAATGGTCTTGAGTaGGCGAGAGGCATTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFVNGLE*ARGIVG
Trigger: GCCCACAATGCCTCTCGCCCACTCAAGACCATTTAC...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTGTAAATGGTCTTGAGTaGGCGAGAGGCATTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIVNGLE*ARGIVG
Trigger: GCCCACAATGCCTCTCGCCCACTCAAGACCATTTAC...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGACCAGGAGGTTCTCGTTaGGGCCCGTGTAGTAAATGG +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARPGGSR*GPCSKW
Trigger: CCATTTACTACACGGGCCCCAACGAGAACCTCCTGG...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TTTGGAATCTGGGCTGGTAGCCTGCTGCCATGCCCATTCCAATGTGAGCCACAGCCAGGAGGTTCTCGTTaGGGCCCGTGTAGTAAATGG +
Preference number: 4 (lower is better)
Translates to: FGIWAGSLLPCPFQCEPQPGGSR*GPCSKW
Trigger: CCATTTACTACACGGGCCCCAACGAGAACCTCCTGG...CTGTGGCTCACATTGGAATGGGCATGGCAGCAGGCTACCAGCCCAGATTCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCCAGCGCATCAGCTTATaGATGGCACTGACGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SSPKHFNAFTNPQSLPAGQRISL*MALTAD
Trigger: GTCAGCCGTCAGTGCCATCCATAAGCTGATGCGCTG...GCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTATCTGGAGGCTCCTATaGCTTCCCACACCTAGTGTG +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIIWRLL*LPTPSV
Trigger: CACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCATCTGGAGGCTCCTATaGCTTCCCACACCTAGTGTG +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFIWRLL*LPTPSV
Trigger: CACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCCAGTTCCCTTTGCACATGCTaGCTCTTCCACTACGAACAC +
Preference number: 4 (lower is better)
Translates to: RGSNVPVSLCRSYGGGSSSLCTC*LFHYEH
Trigger: GTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGA...ACTGGATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp GTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTCAATCTCAGGGCTGGTaGAGAGTCCCGAGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: VSSPKHFNAFTNPQSLPAQSQGW*RVPSSL
Trigger: CAAAGAGCTCGGGACTCTTCACCAGCCCTGAGATTG...AGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCTGTAGTAAATGGTCTTaGGTGGGCGAGAGGCATTGT +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPCSKWS*VGERHC
Trigger: ACAATGCCTCTCGCCCACTCAAGACCATTTACTACA...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCTGTAGTAAATGGTCTTaGGTGGGCGAGAGGCATTGT +
Preference number: 4 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPCSKWS*VGERHC
Trigger: ACAATGCCTCTCGCCCACTCAAGACCATTTACTACA...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTATTTGTGTCCAGGAAGGCTaGGCCCGCACACATTCCCAT +
Preference number: 4 (lower is better)
Translates to: QVLPFAHAGSSTTNTFPICVQEG*ARTHSH
Trigger: ATGGGAATGTGTGCGGGCTCAGCCTTCCTGGACACA...AATAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp ACCAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTAGGGCGAAGGGACAAGTaGCAGAGCTTGACAAGTGTC +
Preference number: 4 (lower is better)
Translates to: TRSFPLHMLALPLRTPSLGRRDK*QSLTSV
Trigger: GACACTTGTCAAGCTCTGTCACTTGTCCCTTCGCCC...TAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CCACCAAGCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGGGGCAGTATGGTGCCTaGGAACTTTTTATATATGGT +
Preference number: 4 (lower is better)
Translates to: PPSLWLLPGGFGIWAGSLGQYGA*ELFIYG
Trigger: ACCATATATAAAAAGTTCTCAGGCACCATACTGCCC...CAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAGGCTCTGAAGGTGGTTaGGTAGTCTTTTGTGGCATG +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAGSEGG*VVFCGM
Trigger: CATGCCACAAAAGACTACTCAACCACCTTCAGAGCC...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp GTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTCCACAGCGAGGGCTCTaGAGGTGGTTGAGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: VSSPKHFNAFTNPQSLPAPQRGL*RWLSSL
Trigger: AAGACTACTCAACCACCTTCAGAGCCCTCGCTGTGG...AGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp GGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGGGACTAGGGTGACTAAGGAGACTCCTGACTTCCAGTaGTATACAATCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GAPCRSAYAMPGTRVTKETPDFQ*YTILGF
Trigger: GAAGCCAAGGATTGTATATCACTGGAAGTCAGGAGT...CTCCTTAGTCACCCTAGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCCATCAAGGCATTCGCTaGTTCTCTTCCTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPHQGIR*FSSSAC
Trigger: ACATGCAGAGGAAGAGAAGCAGCGAATGCCTTGATG...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCAGAAGGAGTCAATGTaGCATCAAGGCATTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIQKESM*HQGIRC
Trigger: GCAGCGAATGCCTTGATGGCACATTGACTCCTTCTG...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TTTGGAATCTGGGCTGGTAGCCTGCTGCCATGCCCATTCCAATGTGAGCCACAGCTCAGCACAAAGACATaGTTCTGGTGCAGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: FGIWAGSLLPCPFQCEPQLSTKT*FWCRRH
Trigger: ATGGCGCCTGCACCAGAAGCATGTCTTTGTGCTGAG...CTGTGGCTCACATTGGAATGGGCATGGCAGCAGGCTACCAGCCCAGATTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGTGGAAGAAGCCGGCTaGGTTGAATTTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VSSPKHFNAFTNPQSLPAVEEAG*VEFGQA
Trigger: TGCCTGCCCAAATTCAACGCAGCCGGCTTCTTCCAC...AGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCCCAGCAGCCGCTCCTaGTCCTCTTCACTGGTGTAT +
Preference number: 4 (lower is better)
Translates to: KCLPQSTLMHSPTHSPCPPSSRS*SSSLVY
Trigger: ATACACCAGTGAAGAGGAGCAGGAGCGGCTGCTGGG...CGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCACTGTTGACCAGAATGCCAGTAACAATCAGGGACAGCTGGCTTGGCATCACCATGTGTGTGGCCTCATaGTGGTGCAAGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SLLTRMPVTIRDSWLGITMCVAS*WCKGGR
Trigger: CCTCCCTCCCTTGCACCAGCATGAGGCCACACACAT...GGTGATGCCAAGCCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCACTGTTGACCAGAATGCCAGTAACAATCAGGGACAGCTGGCTTGGCATCACCTGGCAGGCCCACTTCTaGCTTAGAGGGTCAACTGGG +
Preference number: 4 (lower is better)
Translates to: SLLTRMPVTIRDSWLGITWQAHF*LRGSTG
Trigger: CCCAGTTGACCCTCTAAGGCAGAAGTGGGCCTGCCA...GGTGATGCCAAGCCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTAAAGTGGAAGCTCTCTaGATTGTGCCCTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LPQSTLMHSPTHSPCPLAKVEAL*IVPWVL
Trigger: CAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTT...AGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AACTACAGCAACCCATTAAACAGAGCCACAGCGAGGGCTCTGAAGGTGGTTGAGCACCAAGCCTATGGCTaGTCCCCGGAGGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: NYSNPLNRATARALKVVEHQAYG*SPEALE
Trigger: TTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGGTG...CTCAACCACCTTCAGAGCCCTCGCTGTGGCTCTGTTTAATGGGTTGCTGTAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ATCCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTACTGAGACAGGAGAATTaGTTGAACTGGAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: IPRQQSGSSLHCALGPVVLRQEN*LNWRGR
Trigger: TCTGCCTCTCCAGTTCAAGCAATTCTCCTGTCTCAG...TACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642691.1
CDS-3UTR CCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAAGCCATCTGCATGGATaGAGCGGATGGCGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARSHLHG*SGWRSC
Trigger: ACAAGAACGCCATCCGCTCCATCCATGCAGATGGCT...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCATGGGGTGCAGAAATTaGTCCTTTCGGCGCACGAGT +
Preference number: 4 (lower is better)
Translates to: SSPKHFNAFTNPQSLPAGMGCRN*SFRRTS
Trigger: ACTCGTGCGCCGAAAGGACCAATTTCTGCACCCCAT...GCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTCTCTTCACTGGTGTATaGGGCCTCAATCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LPQSTLMHSPTHSPCPLALFTGV*GLNLRA
Trigger: AGCCCTGAGATTGAGGCCCCATACACCAGTGAAGAG...AGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GGTGGATGGGCGAAGGGACAAGTGACAGAGCTTGACAAGTGTCTTCCCCAAAGCCCTGCTCCTCTTCACTaGTGTATGGGGCCTCAATCT +
Preference number: 4 (lower is better)
Translates to: GGWAKGQVTELDKCLPQSPAPLH*CMGPQS
Trigger: AGATTGAGGCCCCATACACCAGTGAAGAGGAGCAGG...GCTTTGGGGAAGACACTTGTCAAGCTCTGTCACTTGTCCCTTCGCCCATCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AAGTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGGGGCGAGAGGCATTGTaGGCACGACTGTGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: KCLPQSTLMHSPTHSPCPGREAL*ARLCKY
Trigger: GTACTTGCACAGTCGTGCCCACAATGCCTCTCGCCC...CGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTCTCCCAGCCAAAGGATaGGTTCCAGATCTCGCCTTT +
Preference number: 4 (lower is better)
Translates to: LPQSTLMHSPTHSPCPLALPAKG*VPDLAF
Trigger: AAAGGCGAGATCTGGAACCCATCCTTTGGCTGGGAG...AGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTATTTCAGCTGAAGACTaGGTTGCCTCACCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LPQSTLMHSPTHSPCPLAISAED*VASPGA
Trigger: AGCCCCTGGTGAGGCAACCCAGTCTTCAGCTGAAAT...AGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTTGTAGTAAATGGTCTTaGGTGGGCGAGAGGCATTGT +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHICSKWS*VGERHC
Trigger: ACAATGCCTCTCGCCCACTCAAGACCATTTACTACA...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCGATTGTTTCTCCCACTaGTTGTGGAAGGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFDCFSH*LWKDSA
Trigger: TGCACTGTCCTTCCACAATCAGTGGGAGAAACAATC...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417270.1
CDS-3UTR TCA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGAGCCCAAGATCCAGCTaGGAATGTGTGTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLSPRSS*ECVWPH
Trigger: ATGAGGCCACACACATTCTCAGCTGGATCTTGGGCT...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp TCACTGTTGACCAGAATGCCAGTAACAATCAGGGACAGCTGGCTTGGCATCACCGAGGAATGCACTGGCTaGGGTAGGAGAACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SLLTRMPVTIRDSWLGITEECTG*GRRTEA
Trigger: TGCCTCAGTTCTCCTACCTCAGCCAGTGCATTCCTC...GGTGATGCCAAGCCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCCAGTACTCCTGACTTCCAGTaGTATACAATCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RGSNVPVSLCRSYGGGSSTPDFQ*YTILGF
Trigger: GAAGCCAAGGATTGTATATCACTGGAAGTCAGGAGT...ACTGGATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCACTGCTTCTCTTCCTCTaGATGTCAGTAGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWALLLFL*MSVAIL
Trigger: AAGGATGGCTACTGACATGCAGAGGAAGAGAAGCAG...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCATCAAGGCATTCGCTaGTTCTCTTCCTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIHQGIR*FSSSAC
Trigger: ACATGCAGAGGAAGAGAAGCAGCGAATGCCTTGATG...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCATCAAGGCATTCGCTaGTTCTCTTCCTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFHQGIR*FSSSAC
Trigger: ACATGCAGAGGAAGAGAAGCAGCGAATGCCTTGATG...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGACAGAAGGAGTCAATGTaGCATCAAGGCATTCGCTGC +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARQKESM*HQGIRC
Trigger: GCAGCGAATGCCTTGATGGCACATTGACTCCTTCTG...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGTACACAGGCTTCCCTaGCTCACTCAGCACAAAGAC +
Preference number: 4 (lower is better)
Translates to: VSSPKHFNAFTNPQSLPAVHRLP*LTQHKD
Trigger: GTCTTTGTGCTGAGTGAGGCAGGGAAGCCTGTGTAC...AGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GAGGGCCGAGTGCACGTAGCAGTATTAGCTCTTATTATGGCAGGCCCACTTCTGGTACACAGGCTTCCCTaGCTCACTCAGCACAAAGAC +
Preference number: 4 (lower is better)
Translates to: EGRVHVAVLALIMAGPLLVHRLP*LTQHKD
Trigger: GTCTTTGTGCTGAGTGAGGCAGGGAAGCCTGTGTAC...CAGAAGTGGGCCTGCCATAATAAGAGCTAATACTGCTACGTGCACTCGGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GAGGGCCGAGTGCACGTAGCAGTATTAGCTCTTATTATGGCAGGCCCACTTCTGCATAGTGCTGGAAAGTaGCTCCTCAGACCCATAGCG +
Preference number: 4 (lower is better)
Translates to: EGRVHVAVLALIMAGPLLHSAGK*LLRPIA
Trigger: CGCTATGGGTCTGAGGAGGCACTTTCCAGCACTATG...CAGAAGTGGGCCTGCCATAATAAGAGCTAATACTGCTACGTGCACTCGGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGGATGGCGTTCTTGTCTaGCTCCAGGAAGGACACCAG +
Preference number: 4 (lower is better)
Translates to: KCLPQSTLMHSPTHSPCPDGVLV*LQEGHQ
Trigger: CTGGTGTCCTTCCTGGAGGCAGACAAGAACGCCATC...CGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTAAGATGTGGCTCAGCTaGGCACCGGTAAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: VSSPKHFNAFTNPQSLPAKMWLS*APVRRL
Trigger: AAGCCTTCTTACCGGTGCGCAGCTGAGCCACATCTT...AGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGAAGATGTGGCTCAGCTaGGCACCGGTAAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLKMWLS*APVRRL
Trigger: AAGCCTTCTTACCGGTGCGCAGCTGAGCCACATCTT...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGAGTGATAAGAGAGGCAGACAGCAGAAGCTCAGACTGAATATGGGGGTGGGGTGCAGGTCGATGGGGTaGAGAAATTGGTCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: RSDKRGRQQKLRLNMGVGCRSMG*RNWSFR
Trigger: CCGAAAGGACCAATTTCTGCACCCCATCGACCTGCA...CCCCACCCCCATATTCAGTCTGAGCTTCTGCTGTCTGCCTCTCTTATCACTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCACTGTTGACCAGAATGCCAGTAACAATCAGGGACAGCTGGCTTGGCATCACCGCGGCAGTCAGAGACTaGAAAGAAGTCCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: SLLTRMPVTIRDSWLGITAAVRD*KEVLTV
Trigger: GACCGTGAGGACTTCTTTGCAGTCTCTGACTGCCGC...GGTGATGCCAAGCCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCCCCAGAGGTGGGCTCCGCGCTTaGGAAGGCGCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LGAYSPRYTHLSNYDLPRGGLRA*EGAPGS
Trigger: GCTTCCAGGAGCGCCTTCGCAAGCGCGGAGCCCACC...TCTGGGGAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACCAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTAAAAGTGGAAGCTCTCTaGATTGTGCCCTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TRSFPLHMLALPLRTPSLKVEAL*IVPWVL
Trigger: CAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTT...TAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTATTAAGTCCTGGCTGATCTaGCGCATGTCTGTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: QVLPFAHAGSSTTNTFPIKSWLI*RMSVGS
Trigger: GCTGCCTACAGACATGCGCCAGATCAGCCAGGACTT...AATAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTATTACAAAGACATGCTTCTaGTGCAGGCGCCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: QVLPFAHAGSSTTNTFPITKTCF*CRRHAS
Trigger: GGAGGCATGGCGCCTGCACCAGAAGCATGTCTTTGT...AATAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGTAAATGGTCTTGAGTaGGCGAGAGGCATTGTGGGC +
Preference number: 4 (lower is better)
Translates to: VSSPKHFNAFTNPQSLPAVNGLE*ARGIVG
Trigger: GCCCACAATGCCTCTCGCCCACTCAAGACCATTTAC...AGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AAGTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCCAGGAGGTTCTCGTTaGGGCCCGTGTAGTAAATGG +
Preference number: 4 (lower is better)
Translates to: KCLPQSTLMHSPTHSPCPPGGSR*GPCSKW
Trigger: CCATTTACTACACGGGCCCCAACGAGAACCTCCTGG...CGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGATCTGGAGGCTCCTATaGCTTCCCACACCTAGTGTG +
Preference number: 4 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLIWRLL*LPTPSV
Trigger: CACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTTCCCTTTGCACATGCTaGCTCTTCCACTACGAACAC +
Preference number: 4 (lower is better)
Translates to: LPQSTLMHSPTHSPCPLASLCTC*LFHYEH
Trigger: GTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGA...AGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CAA 72 bp TCAGGGCAACCAAAAGAGGCACTTAGGGGCTCACTGTaGACCAGAATGCCAGTAACAATCAGGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SGQPKEALRGSL*TRMPVTIRDSW
Trigger: CCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGAGCCCCTAAGTGCCTCTTTTGGTTGCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAGCAGTTCATTTCAAGTaGGAGAAAGGGACGTTAGGA +
Preference number: 4 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAAVHFK*EKGTLG
Trigger: TCCTAACGTCCCTTTCTCTCACTTGAAATGAACTGC...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS-3UTR TCA 90 bp AGGAGTGATAAGAGAGGCAGACAGCAGAAGCTCAGACTGAATATGGGGGTGGGGGAGTCCCGAGCTCTTTaGCTTATAGAGGAAGTGACG +
Preference number: 4 (lower is better)
Translates to: RSDKRGRQQKLRLNMGVGESRAL*LIEEVT
Trigger: CGTCACTTCCTCTATAAGTCAAAGAGCTCGGGACTC...CCCCACCCCCATATTCAGTCTGAGCTTCTGCTGTCTGCCTCTCTTATCACTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGATGTAGTAAATGGTCTTaGGTGGGCGAGAGGCATTGT +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARCSKWS*VGERHC
Trigger: ACAATGCCTCTCGCCCACTCAAGACCATTTACTACA...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTATTCTGAATTTCAGCTaGAGACTGGGTTGCCTCACC +
Preference number: 4 (lower is better)
Translates to: LPQSTLMHSPTHSPCPLAILNFS*RLGCLT
Trigger: GGTGAGGCAACCCAGTCTTCAGCTGAAATTCAGAAT...AGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp TTTGGAATCTGGGCTGGTAGCCTGCTGCCATGCCCATTCCAATGTGAGCCACAGTTCTCTCTGACAGTCTaGAGACCACATTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: FGIWAGSLLPCPFQCEPQFSLTV*RPHSED
Trigger: GTCCTCTGAATGTGGTCTTCAGACTGTCAGAGAGAA...CTGTGGCTCACATTGGAATGGGCATGGCAGCAGGCTACCAGCCCAGATTCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGATTCTCTCTGACAGTCTaGAGACCACATTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARFSLTV*RPHSED
Trigger: GTCCTCTGAATGTGGTCTTCAGACTGTCAGAGAGAA...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCACTGTTGACCAGAATGCCAGTAACAATCAGGGACAGCTGGCTTGGCATCACCGTACACAGGCTTCCCTaGCTCACTCAGCACAAAGAC +
Preference number: 4 (lower is better)
Translates to: SLLTRMPVTIRDSWLGITVHRLP*LTQHKD
Trigger: GTCTTTGTGCTGAGTGAGGCAGGGAAGCCTGTGTAC...GGTGATGCCAAGCCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp TCACTGTTGACCAGAATGCCAGTAACAATCAGGGACAGCTGGCTTGGCATCACCTACCTTGTAGCCATCTaGATGGATGGAGCGGATGGC +
Preference number: 4 (lower is better)
Translates to: SLLTRMPVTIRDSWLGITYLVAI*MDGADG
Trigger: GCCATCCGCTCCATCCATGCAGATGGCTACAAGGTA...GGTGATGCCAAGCCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GGAGAGGGGCTCAAATGTGCCTGTGTCCCTGTGCAGGAGCTACGGAGGAGGATCGGTAGGGCAGTATGGTaGCTGAGAACTTTTTATATA +
Preference number: 4 (lower is better)
Translates to: GEGLKCACVPVQELRRRIGRAVW*LRTFYI
Trigger: TATATAAAAAGTTCTCAGGCACCATACTGCCCTACC...GATCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCACATTTGAGCCCCTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ATTCAGAGGACAGTTTTCTCCAATAAGTACTTCCTAGGCCTTGTGTTCCCTGGGGACCCAGGGCATGTGTaGAGGGTGAACAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: IQRTVFSNKYFLGLVFPGDPGHV*RVNSTH
Trigger: GTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTC...CCCAGGGAACACAAGGCCTAGGAAGTACTTATTGGAGAAAACTGTCCTCTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp TCACTGTTGACCAGAATGCCAGTAACAATCAGGGACAGCTGGCTTGGCATCACCGTAAATGGTCTTGAGTaGGCGAGAGGCATTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SLLTRMPVTIRDSWLGITVNGLE*ARGIVG
Trigger: GCCCACAATGCCTCTCGCCCACTCAAGACCATTTAC...GGTGATGCCAAGCCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AAGTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGATCTGGAGGCTCCTATaGCTTCCCACACCTAGTGTG +
Preference number: 4 (lower is better)
Translates to: KCLPQSTLMHSPTHSPCPIWRLL*LPTPSV
Trigger: CACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT...CGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AAGTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTCCCAGCCAAAGGATaGGTTCCAGATCTCGCCTTT +
Preference number: 4 (lower is better)
Translates to: KCLPQSTLMHSPTHSPCPLPAKG*VPDLAF
Trigger: AAAGGCGAGATCTGGAACCCATCCTTTGGCTGGGAG...CGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGTCAGTAGCCATCCTTTaGGCTCTCCTGTTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLSVAIL*ALLFLR
Trigger: TCTGAGAAACAGGAGAGCTCAAAGGATGGCTACTGA...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296473.7
CDS-3UTR TCA 90 bp AAGTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGGAGTCCCGAGCTCTTTaGCTTATAGAGGAAGTGACG +
Preference number: 4 (lower is better)
Translates to: KCLPQSTLMHSPTHSPCPESRAL*LIEEVT
Trigger: CGTCACTTCCTCTATAAGTCAAAGAGCTCGGGACTC...CGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AGGAGTGATAAGAGAGGCAGACAGCAGAAGCTCAGACTGAATATGGGGGTGGGGACAAGTGACAGAGCTTaGCAAGTGTCTTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RSDKRGRQQKLRLNMGVGTSDRA*QVSSPK
Trigger: CTTTGGGGAAGACACTTGTCAAGCTCTGTCACTTGT...CCCCACCCCCATATTCAGTCTGAGCTTCTGCTGTCTGCCTCTCTTATCACTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp GTGTACCCTGGGTCCATGTCACCCACACAGGCTCATTCTTCAATATGGCTTGATAGCCCAAGATCCAGCTaGGAATGTGTGTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: VYPGSMSPTQAHSSIWLDSPRSS*ECVWPH
Trigger: ATGAGGCCACACACATTCTCAGCTGGATCTTGGGCT...ATCAAGCCATATTGAAGAATGAGCCTGTGTGGGTGACATGGACCCAGGGTACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CTACGGAGGAGGATCCAGTGTCTGTATGTGAGTGAGGGTGGATGGGCGAAGGGAGGGCAGTATGGTGCCTaGGAACTTTTTATATATGGT +
Preference number: 4 (lower is better)
Translates to: LRRRIQCLYVSEGGWAKGGQYGA*ELFIYG
Trigger: ACCATATATAAAAAGTTCTCAGGCACCATACTGCCC...TCCCTTCGCCCATCCACCCTCACTCACATACAGACACTGGATCCTCCTCCGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp GCGAAGGGACAAGTGACAGAGCTTGACAAGTGTCTTCCCCAAAGCACTTTAATGCTTCATGGGAAGGCCTaGGCAGGGACAGTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: AKGQVTELDKCLPQSTLMLHGKA*AGTVSS
Trigger: TGAGGAAACTGTCCCTGCTCAGGCCTTCCCATGAAG...CATTAAAGTGCTTTGGGGAAGACACTTGTCAAGCTCTGTCACTTGTCCCTTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp GTGTACCCTGGGTCCATGTCACCCACACAGGCTCATTCTTCAATATGGCTTGATCCCTCAGCTCACTCTTaGGGACCATTTGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: VYPGSMSPTQAHSSIWLDPSAHS*GPFGGM
Trigger: CATTCCTCCAAATGGTCCTCAAGAGTGAGCTGAGGG...ATCAAGCCATATTGAAGAATGAGCCTGTGTGGGTGACATGGACCCAGGGTACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGAACATTTATCCAACTATaGTCTCCCCAGAATATATGC +
Preference number: 4 (lower is better)
Translates to: PPAAKWKLSALCPGSCGRTFIQL*SPQNIC
Trigger: GCATATATTCTGGGGAGATCATAGTTGGATAAATGT...TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CAA 72 bp ACATGCTGGCTCTTCCACTACGAACACCTTCCCTATTaGTCTGTCTTCCCACCCCTGATCTCCAAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: TCWLFHYEHLPY*SVFPPLISKQV
Trigger: TACCTGCTTGGAGATCAGGGGTGGGAAGACAGACAAATAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp ATTCAGAGGACAGTTTTCTCCAATAAGTACTTCCTAGGCCTTGTGTTCCCTGGGGAGGAATGCACTGGCTaGGGTAGGAGAACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: IQRTVFSNKYFLGLVFPGEECTG*GRRTEA
Trigger: TGCCTCAGTTCTCCTACCTCAGCCAGTGCATTCCTC...CCCAGGGAACACAAGGCCTAGGAAGTACTTATTGGAGAAAACTGTCCTCTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GTGTACCCTGGGTCCATGTCACCCACACAGGCTCATTCTTCAATATGGCTTGATCAGAAGGAGTCAATGTaGCATCAAGGCATTCGCTGC +
Preference number: 4 (lower is better)
Translates to: VYPGSMSPTQAHSSIWLDQKESM*HQGIRC
Trigger: GCAGCGAATGCCTTGATGGCACATTGACTCCTTCTG...ATCAAGCCATATTGAAGAATGAGCCTGTGTGGGTGACATGGACCCAGGGTACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGATCAACTCTCAGAAACTaGATGAGGGTGATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARSTLRN*MRVILS
Trigger: AGAGAGAATCACCCTCATGCAGTTTCTGAGAGTTGA...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ATTCAGAGGACAGTTTTCTCCAATAAGTACTTCCTAGGCCTTGTGTTCCCTGGGGCAGGTGCAGGTCGATaGGGTGCAGAAATTGGTCCT +
Preference number: 4 (lower is better)
Translates to: IQRTVFSNKYFLGLVFPGAGAGR*GAEIGP
Trigger: AGGACCAATTTCTGCACCCCATCGACCTGCACCTGC...CCCAGGGAACACAAGGCCTAGGAAGTACTTATTGGAGAAAACTGTCCTCTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCTCTCGCAGGGCCAGGTaGGCTCCGCGCTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: TQAHSSIWLDFSSRKYWLSRRAR*APRLRR
Trigger: CCTTCGCAAGCGCGGAGCCCACCTGGCCCTGCGAGA...GAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGGGACTAGGGTGACTAAGGAGGCTCATTCTTCAATATaGCTTGATTTTAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: GAPCRSAYAMPGTRVTKEAHSSI*LDFSSR
Trigger: TCTGCTACTAAAATCAAGCCATATTGAAGAATGAGC...CTCCTTAGTCACCCTAGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ATCCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTATGTGCTGCCATTTTCTaGGACAATAAATACAACTGT +
Preference number: 4 (lower is better)
Translates to: IPRQQSGSSLHCALGPVVCAAIF*DNKYNC
Trigger: ACAGTTGTATTTATTGTCCCAGAAAATGGCAGCACA...TACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GCGAAGGGACAAGTGACAGAGCTTGACAAGTGTCTTCCCCAAAGCACTTTAATGCAGAAGGAGTCAATGTaGCATCAAGGCATTCGCTGC +
Preference number: 4 (lower is better)
Translates to: AKGQVTELDKCLPQSTLMQKESM*HQGIRC
Trigger: GCAGCGAATGCCTTGATGGCACATTGACTCCTTCTG...CATTAAAGTGCTTTGGGGAAGACACTTGTCAAGCTCTGTCACTTGTCCCTTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAGTAGGGTGTGCGCAGTaGCTCTCGCAGGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: HRLILQYGLILVAENIGSVGCAQ*LSQGQV
Trigger: CACCTGGCCCTGCGAGAGGCACTGCGCACACCCTAC...TGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACACTCCTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCGTGCCTGTGTCCCTGTaGAGGAGCTACGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TLLGAYSPRYTHLSNYDLVPVSL*RSYGGG
Trigger: TCCTCCTCCGTAGCTCCTGCACAGGGACACAGGCAC...GAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAGGAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp GCGAAGGGACAAGTGACAGAGCTTGACAAGTGTCTTCCCCAAAGCACTTTAATGAGGGAGACTGGATTCTaGATTTCAGCTGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: AKGQVTELDKCLPQSTLMRETGF*ISAEDW
Trigger: CCAGTCTTCAGCTGAAATTCAGAATCCAGTCTCCCT...CATTAAAGTGCTTTGGGGAAGACACTTGTCAAGCTCTGTCACTTGTCCCTTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp GCGAAGGGACAAGTGACAGAGCTTGACAAGTGTCTTCCCCAAAGCACTTTAATGCATCAAGGCATTCGCTaGTTCTCTTCCTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: AKGQVTELDKCLPQSTLMHQGIR*FSSSAC
Trigger: ACATGCAGAGGAAGAGAAGCAGCGAATGCCTTGATG...CATTAAAGTGCTTTGGGGAAGACACTTGTCAAGCTCTGTCACTTGTCCCTTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACACTCCTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCTGTGTGGCCTCATGCTaGTGCAAGGGAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TLLGAYSPRYTHLSNYDLCVASC*CKGGRR
Trigger: TCTCCTCCCTCCCTTGCACCAGCATGAGGCCACACA...GAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAGGAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp CACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAGGCATGTGTGCAGGGTaGACAGCACCCACCAAGCCT +
Preference number: 4 (lower is better)
Translates to: HRLILQYGLILVAENIGSGMCAG*TAPTKP
Trigger: AGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCC...TGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACACTCCTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCGATGGCGTTCTTGTCTaGCTCCAGGAAGGACACCAG +
Preference number: 4 (lower is better)
Translates to: TLLGAYSPRYTHLSNYDLDGVLV*LQEGHQ
Trigger: CTGGTGTCCTTCCTGGAGGCAGACAAGAACGCCATC...GAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAGGAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACACTCCTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCGCGGCAGTCAGAGACTaGAAAGAAGTCCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: TLLGAYSPRYTHLSNYDLAAVRD*KEVLTV
Trigger: GACCGTGAGGACTTCTTTGCAGTCTCTGACTGCCGC...GAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAGGAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCATGCCCCATGCAGGTCTaGCTATGCCATGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: HRLILQYGLILVAENIGSCPMQV*LCHARD
Trigger: GTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCA...TGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCATCCCTGGGCCATTCCTaGTGTGGGGCTCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HRLILQYGLILVAENIGSSLGHS*CGALSS
Trigger: AGAGCTGAGAGCCCCACACCAGGAATGGCCCAGGGA...TGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GAGGGCCGAGTGCACGTAGCAGTATTAGCTCTTATTATGGCAGGCCCACTTCTGTGTGCTGCCATTTTCTaGGACAATAAATACAACTGT +
Preference number: 4 (lower is better)
Translates to: EGRVHVAVLALIMAGPLLCAAIF*DNKYNC
Trigger: ACAGTTGTATTTATTGTCCCAGAAAATGGCAGCACA...CAGAAGTGGGCCTGCCATAATAAGAGCTAATACTGCTACGTGCACTCGGCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp GTGTACCCTGGGTCCATGTCACCCACACAGGCTCATTCTTCAATATGGCTTGATGTGATATACAATCCTTaGCTTCCCAAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: VYPGSMSPTQAHSSIWLDVIYNP*LPKVLG
Trigger: TCCCAACACTTTGGGAAGCCAAGGATTGTATATCAC...ATCAAGCCATATTGAAGAATGAGCCTGTGTGGGTGACATGGACCCAGGGTACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp ACACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAGCTGCCCCATCCTCTaGCTCAGTCAGGTCCTCGTA +
Preference number: 4 (lower is better)
Translates to: TQAHSSIWLDFSSRKYWLSCPIL*LSQVLV
Trigger: TACGAGGACCTGACTGAGTCAGAGGATGGGGCAGCT...GAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTGCTTATGGATGGCACTaGCGGCTGACGCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: RLILQYGLILVAENIGSTAYGWH*RLTPWS
Trigger: GGACCAAGGCGTCAGCCGTCAGTGCCATCCATAAGC...AGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp AACTACAGCAACCCATTAAACAGAGCCACAGCGAGGGCTCTGAAGGTGGTTGAGACATTTATCCAACTATaGTCTCCCCAGAATATATGC +
Preference number: 4 (lower is better)
Translates to: NYSNPLNRATARALKVVETFIQL*SPQNIC
Trigger: GCATATATTCTGGGGAGATCATAGTTGGATAAATGT...CTCAACCACCTTCAGAGCCCTCGCTGTGGCTCTGTTTAATGGGTTGCTGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACACTCCTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCTACCTTGTAGCCATCTaGATGGATGGAGCGGATGGC +
Preference number: 4 (lower is better)
Translates to: TLLGAYSPRYTHLSNYDLYLVAI*MDGADG
Trigger: GCCATCCGCTCCATCCATGCAGATGGCTACAAGGTA...GAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAGGAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCCCCAGCAGCCGCTCCTaGTCCTCTTCACTGGTGTAT +
Preference number: 4 (lower is better)
Translates to: TQAHSSIWLDFSSRKYWLPSSRS*SSSLVY
Trigger: ATACACCAGTGAAGAGGAGCAGGAGCGGCTGCTGGG...GAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTCTCAGGCGTGAGCCACCATaGCCGGCCTGTACTAGGTTC +
Preference number: 4 (lower is better)
Translates to: LILQYGLILVAENIGSTLRREPP*PACTRF
Trigger: GAACCTAGTACAGGCCGGGCATGGTGGCTCACGCCT...GAGAGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AACTACAGCAACCCATTAAACAGAGCCACAGCGAGGGCTCTGAAGGTGGTTGAGAGTAGCAGAAAATATTaGCTCAACTCTCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: NYSNPLNRATARALKVVESSRKY*LNSQKL
Trigger: CAGTTTCTGAGAGTTGAGCCAATATTTTCTGCTACT...CTCAACCACCTTCAGAGCCCTCGCTGTGGCTCTGTTTAATGGGTTGCTGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGAGTGATAAGAGAGGCAGACAGCAGAAGCTCAGACTGAATATGGGGGTGGGGGCTCATTCTTCAATATaGCTTGATTTTAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: RSDKRGRQQKLRLNMGVGAHSSI*LDFSSR
Trigger: TCTGCTACTAAAATCAAGCCATATTGAAGAATGAGC...CCCCACCCCCATATTCAGTCTGAGCTTCTGCTGTCTGCCTCTCTTATCACTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR TCA 90 bp ACACTCCTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCGGCTCTGAAGGTGGTTaGGTAGTCTTTTGTGGCATG +
Preference number: 4 (lower is better)
Translates to: TLLGAYSPRYTHLSNYDLGSEGG*VVFCGM
Trigger: CATGCCACAAAAGACTACTCAACCACCTTCAGAGCC...GAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAGGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCATCTCGTGCCATGAGCTaGAGCAGGTTGTCGGTGATG +
Preference number: 4 (lower is better)
Translates to: HRLILQYGLILVAENIGSSRAMS*SRLSVM
Trigger: CATCACCGACAACCTGCTGCAGCTCATGGCACGAGA...TGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCGTGGAAGAAGCCGGCTaGGTTGAATTTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TQAHSSIWLDFSSRKYWLVEEAG*VEFGQA
Trigger: TGCCTGCCCAAATTCAACGCAGCCGGCTTCTTCCAC...GAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTCTCCCCAGCAGCCGCTCCTaGTCCTCTTCACTGGTGTAT +
Preference number: 4 (lower is better)
Translates to: LILQYGLILVAENIGSTLPSSRS*SSSLVY
Trigger: ATACACCAGTGAAGAGGAGCAGGAGCGGCTGCTGGG...GAGAGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCCCAGGAGGTTCTCGTTaGGGCCCGTGTAGTAAATGG +
Preference number: 4 (lower is better)
Translates to: TQAHSSIWLDFSSRKYWLPGGSR*GPCSKW
Trigger: CCATTTACTACACGGGCCCCAACGAGAACCTCCTGG...GAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTGATAGCGTTGATGGCTaGAGGCCCCCGTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: RLILQYGLILVAENIGSTDSVDG*RPPSSS
Trigger: GCTTGAAGACGGGGGCCTCCAGCCATCAACGCTATC...AGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTATCCTCAGAGCTTCCTaGCAGCATCTCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RLILQYGLILVAENIGSTILRAS*QHLLLQ
Trigger: CTGCAGGAGGAGATGCTGCCAGGAAGCTCTGAGGAT...AGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTCATGGATGGAGCGGATaGCGTTCTTGTCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RLILQYGLILVAENIGSTHGWSG*RSCLPP
Trigger: TGGAGGCAGACAAGAACGCCATCCGCTCCATCCATG...AGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCACCTGCTCCTCTTCACTaGTGTATGGGGCCTCAATCT +
Preference number: 4 (lower is better)
Translates to: HRLILQYGLILVAENIGSPAPLH*CMGPQS
Trigger: AGATTGAGGCCCCATACACCAGTGAAGAGGAGCAGG...TGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAATTTCAGCTGAAGACTaGGTTGCCTCACCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HRLILQYGLILVAENIGSISAED*VASPGA
Trigger: AGCCCCTGGTGAGGCAACCCAGTCTTCAGCTGAAAT...TGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ACACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCTGTTCCAGTGTACCCTaGGTCCATGTCACCCACACA +
Preference number: 4 (lower is better)
Translates to: TQAHSSIWLDFSSRKYWLCSSVP*VHVTHT
Trigger: TGTGTGGGTGACATGGACCCAGGGTACACTGGAACA...GAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp AGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTAGCTCGCTAAAGTCCTaGCTGATCTGGCGCATGTCT +
Preference number: 4 (lower is better)
Translates to: RLILQYGLILVAENIGSTSSLKS*LIWRMS
Trigger: AGACATGCGCCAGATCAGCCAGGACTTTAGCGAGCT...AGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTCTCCTCTTCACTGGTGTATaGGGCCTCAATCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LILQYGLILVAENIGSTLLFTGV*GLNLRA
Trigger: AGCCCTGAGATTGAGGCCCCATACACCAGTGAAGAG...GAGAGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTCTCGTAAATGGTCTTGAGTaGGCGAGAGGCATTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LILQYGLILVAENIGSTLVNGLE*ARGIVG
Trigger: GCCCACAATGCCTCTCGCCCACTCAAGACCATTTAC...GAGAGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp ATTCAGAGGACAGTTTTCTCCAATAAGTACTTCCTAGGCCTTGTGTTCCCTGGGAGTAGCAGAAAATATTaGCTCAACTCTCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: IQRTVFSNKYFLGLVFPGSSRKY*LNSQKL
Trigger: CAGTTTCTGAGAGTTGAGCCAATATTTTCTGCTACT...CCCAGGGAACACAAGGCCTAGGAAGTACTTATTGGAGAAAACTGTCCTCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CCA 90 bp CTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTCTCAGGCCCCAGAGGCAGTaGTTTGGTGTTCTTACTAGG +
Preference number: 4 (lower is better)
Translates to: LILQYGLILVAENIGSTLRPQRQ*FGVLTR
Trigger: CCTAGTAAGAACACCAAACCACTGCCTCTGGGGCCT...GAGAGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
3UTR CAA 72 bp CCATGTCACCCACACAGGCTCATTCTTCAATATGGCTaGATTTTAGTAGCAGAAAATATTGGCTCAACTCTC +
Preference number: 4 (lower is better)
Translates to: PCHPHRLILQYG*ILVAENIGSTL
Trigger: GAGAGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGTGGGTGACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp AGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTCTGCTTCTCTTCCTCTaGATGTCAGTAGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: RLILQYGLILVAENIGSTLLLFL*MSVAIL
Trigger: AAGGATGGCTACTGACATGCAGAGGAAGAGAAGCAG...AGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp ACACTCCTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCGGTAGGGCAGTATGGTaGCTGAGAACTTTTTATATA +
Preference number: 4 (lower is better)
Translates to: TLLGAYSPRYTHLSNYDLGRAVW*LRTFYI
Trigger: TATATAAAAAGTTCTCAGGCACCATACTGCCCTACC...GAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAGGAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR GCA 90 bp CTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTCTCTCAACTCTCAGAAACTaGATGAGGGTGATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LILQYGLILVAENIGSTLSTLRN*MRVILS
Trigger: AGAGAGAATCACCCTCATGCAGTTTCTGAGAGTTGA...GAGAGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS CCA 90 bp GCAGGATGGAGAAGACCAGGCTGCGCGCACGCGCCTGCTGCAGGCTaGCGCTCACAGTGTCGCGCACGGCCGCCGCCAGGGGCAGGCACC +
Preference number: 5 (lower is better)
Translates to: AGWRRPGCAHAPAAG*RSQCRARPPPGAGT
Trigger: GGTGCCTGCCCCTGGCGGCGGCCGTGCGCGACACTGTGAGCGCCAGCCTGCAGCAGGCGCGTGCGCGCAGCCTGGTCTTCTCCATCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CCA 90 bp CGGCGCCGAGGGACTGGTTCTGGGCTCCTAGTCCCAGCAGAGCCGTaGGCAGGTCCTGACCCGGGTCCGCGATTGCCTCATCCGGCGCCG +
Preference number: 5 (lower is better)
Translates to: RRRGTGSGLLVPAEP*AGPDPGPRLPHPAP
Trigger: CGGCGCCGGATGAGGCAATCGCGGACCCGGGTCAGGACCTGCCCACGGCTCTGCTGGGACTAGGAGCCCAGAACCAGTCCCTCGGCGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS GCA 90 bp AGGCCCAGCTCCAGCCGCTCAGCCCGACTCGGCCCGCCCCCGGGGTaGATTGTGGGAAATGTAGTCCTTAGCGTTTGGCCGCCTGCGGCG +
Preference number: 5 (lower is better)
Translates to: RPSSSRSARLGPPPG*IVGNVVLSVWPPAA
Trigger: CGCCGCAGGCGGCCAAACGCTAAGGACTACATTTCCCACAATGCACCCCGGGGGCGGGCCGAGTCGGGCTGAGCGGCTGGAGCTGGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS GCA 90 bp CTCAGAGGAGTCCAGGACGCACAGAAGGTGCCGGTCACTGCCCTCTaGCGGACCCATGGAGGGGTAAGGGTGTCCGGCCGGGGCCGGCCT +
Preference number: 5 (lower is better)
Translates to: LRGVQDAQKVPVTAL*RTHGGVRVSGRGRP
Trigger: AGGCCGGCCCCGGCCGGACACCCTTACCCCTCCATGGGTCCGGCAGAGGGCAGTGACCGGCACCTTCTGTGCGTCCTGGACTCCTCTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000473451.1
ENST00000483022.5
ENST00000486107.5
CDS GCA 90 bp AGGGTGTGCGCAGTGCCTCTCGCAGGGCCAGGTGGGCTCCGCGCTTaGGAAGGCGCTCCTGGAAGCGGCGGCGGCAGTCAGAGACTGCAA +
Preference number: 5 (lower is better)
Translates to: RVCAVPLAGPGGLRA*EGAPGSGGGSQRLQ
Trigger: TTGCAGTCTCTGACTGCCGCCGCCGCTTCCAGGAGCGCCTTCGCAAGCGCGGAGCCCACCTGGCCCTGCGAGAGGCACTGCGCACACCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGAGGTGGGCTCCGCGCTaGCGAAGGCGCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: THSPCPLAGQERPAPIWRRWAPR*RRRSWK
Trigger: CTTCCAGGAGCGCCTTCGCAAGCGCGGAGCCCACCT...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS CCA 90 bp ACCCGGGTCCGCGATTGCCTCATCCGGCGCCGCCTTCTAGGGGCCTaGGCGCCTCCTCCGAGTCTAGAGTCCCACACAGAACAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: TRVRDCLIRRRLLGA*APPPSLESHTEQPW
Trigger: CCAGGGCTGTTCTGTGTGGGACTCTAGACTCGGAGGAGGCGCCCAGGCCCCTAGAAGGCGGCGCCGGATGAGGCAATCGCGGACCCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS CCA 90 bp GCCTCTCGCAGGGCCAGGTGGGCTCCGCGCTTGCGAAGGCGCTCCTaGAAGCGGCGGCGGCAGTCAGAGACTGCAAAGAAGTCCTCACGG +
Preference number: 5 (lower is better)
Translates to: ASRRARWAPRLRRRS*KRRRQSETAKKSSR
Trigger: CCGTGAGGACTTCTTTGCAGTCTCTGACTGCCGCCGCCGCTTCCAGGAGCGCCTTCGCAAGCGCGGAGCCCACCTGGCCCTGCGAGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 90 bp GTCAGGGATGCCCACTTGGGCAACGCTGTAGTAGGGTGTGCGCAGTaGCTCTCGCAGGGCCAGGTGGGCTCCGCGCTTGCGAAGGCGCTC +
Preference number: 5 (lower is better)
Translates to: VRDAHLGNAVVGCAQ*LSQGQVGSALAKAL
Trigger: GAGCGCCTTCGCAAGCGCGGAGCCCACCTGGCCCTGCGAGAGGCACTGCGCACACCCTACTACAGCGTTGCCCAAGTGGGCATCCCTGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CCA 90 bp GGCCCGCCCCCGGGGTGCATTGTGGGAAATGTAGTCCTTAGCGTTTaGCCGCCTGCGGCGCCGAGGGACTGGTTCTGGGCTCCTAGTCCC +
Preference number: 5 (lower is better)
Translates to: GPPPGCIVGNVVLSV*PPAAPRDWFWAPSP
Trigger: GGGACTAGGAGCCCAGAACCAGTCCCTCGGCGCCGCAGGCGGCCAAACGCTAAGGACTACATTTCCCACAATGCACCCCGGGGGCGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS GCA 90 bp CACCGTGCCGCCCCCATCAGGAAGCTGGGGTCTCGTGCCATGAGCTaGAGCAGGTTGTCGGTGATGCGCTCTGAGCCCGAGAGTAGGCGC +
Preference number: 5 (lower is better)
Translates to: HRAAPIRKLGSRAMS*SRLSVMRSEPESRR
Trigger: GCGCCTACTCTCGGGCTCAGAGCGCATCACCGACAACCTGCTGCAGCTCATGGCACGAGACCCCAGCTTCCTGATGGGGGCGGCACGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 90 bp GACGCAGGTCAGGGATGCCCACTTGGGCAACGCTGTAGTAGGGTGTaGGCAGTGCCTCTCGCAGGGCCAGGTGGGCTCCGCGCTTGCGAA +
Preference number: 5 (lower is better)
Translates to: DAGQGCPLGQRCSRV*AVPLAGPGGLRACE
Trigger: TTCGCAAGCGCGGAGCCCACCTGGCCCTGCGAGAGGCACTGCGCACACCCTACTACAGCGTTGCCCAAGTGGGCATCCCTGACCTGCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CCA 90 bp TCCCGGGCCACACCCGTCAGCTGGGTGCTTAGCTCGCTAAAGTCCTaGCTGATCTGGCGCATGTCTGTAGGCAGCGGCGGGGGACCCCTG +
Preference number: 5 (lower is better)
Translates to: SRATPVSWVLSSLKS*LIWRMSVGSGGGPL
Trigger: CAGGGGTCCCCCGCCGCTGCCTACAGACATGCGCCAGATCAGCCAGGACTTTAGCGAGCTAAGCACCCAGCTGACGGGTGTGGCCCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000483022.5
ENST00000493206.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCATGAGCTGCAGCAGGTaGTCGGTGATGCGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGMSCSR*SVMRSE
Trigger: CTCAGAGCGCATCACCGACAACCTGCTGCAGCTCAT...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGAGTGGGCGAGAGGCATaGTGGGCACGACTGTGCAAG +
Preference number: 5 (lower is better)
Translates to: THSPCPLAGQERPAPIWRSGREA*WARLCK
Trigger: CTTGCACAGTCGTGCCCACAATGCCTCTCGCCCACT...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS GCA 90 bp GGGGGTTCCAGCCAATCCTCAGAGCTTCCTGGCAGCATCTCCTCCTaGAGGTCCCGGGCCACACCCGTCAGCTGGGTGCTTAGCTCGCTA +
Preference number: 5 (lower is better)
Translates to: GGSSQSSELPGSISS*RSRATPVSWVLSSL
Trigger: TAGCGAGCTAAGCACCCAGCTGACGGGTGTGGCCCGGGACCTGCAGGAGGAGATGCTGCCAGGAAGCTCTGAGGATTGGCTGGAACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000483022.5
ENST00000493206.1
ENST00000642691.1
ENST00000645862.1
CDS CCA 90 bp ACACCCGTCAGCTGGGTGCTTAGCTCGCTAAAGTCCTGGCTGATCTaGCGCATGTCTGTAGGCAGCGGCGGGGGACCCCTGGTACCCTCC +
Preference number: 5 (lower is better)
Translates to: TPVSWVLSSLKSWLI*RMSVGSGGGPLVPS
Trigger: GGAGGGTACCAGGGGTCCCCCGCCGCTGCCTACAGACATGCGCCAGATCAGCCAGGACTTTAGCGAGCTAAGCACCCAGCTGACGGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000483022.5
ENST00000493206.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAGACCCGGGTCCGCGATaGCCTCATCCGGCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWADPGPR*PHPAPP
Trigger: AGGCGGCGCCGGATGAGGCAATCGCGGACCCGGGTC...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS-3UTR CAA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTGACCCGGGTCCGCGATaGCCTCATCCGGCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIDPGPR*PHPAPP
Trigger: AGGCGGCGCCGGATGAGGCAATCGCGGACCCGGGTC...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS-3UTR CAA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGTGGTTGAGTAGTCTTTaGTGGCATGCAGCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: THSPCPLAGQERPAPIWRWLSSL*WHAAGG
Trigger: GCCCCCTGCTGCATGCCACAAAAGACTACTCAACCA...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGAACACCTTCCCTATTaGTCTGTCTTCCCACCCCTG +
Preference number: 5 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGEHLPY*SVFPPL
Trigger: CAGGGGTGGGAAGACAGACAAATAGGGAAGGTGTTC...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS GCA 90 bp GCGCTTGCGAAGGCGCTCCTGGAAGCGGCGGCGGCAGTCAGAGACTaGAAAGAAGTCCTCACGGTCAGTGGAGACAAGCAGCAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: ALAKALLEAAAAVRD*KEVLTVSGDKQQAE
Trigger: CTCTGCCTGCTGCTTGTCTCCACTGACCGTGAGGACTTCTTTGCAGTCTCTGACTGCCGCCGCCGCTTCCAGGAGCGCCTTCGCAAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCCTCCTGCGCCAGCTCTaGTGCCGACTGCCGCGTACG +
Preference number: 5 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPLLRQL*CRLPRT
Trigger: CGTACGCGGCAGTCGGCACAAGAGCTGGCGCAGGAG...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTCCTGGATGTCCATGGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGGGACTAGTGCCACGAGCTGGTaGCGGGCCAGCAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: LLDVHGAPCRSAYAMPGTSATSW*RASRME
Trigger: CTCCATCCTGCTGGCCCGCAACCAGCTCGTGGCACT...AGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACCATGGACATCCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp AGAGACCCAGGGCATGTGTGCAGGGTGAACAGCACCCACCAAGCCTATGGCTGCAGTGCCACGAGCTGGTaGCGGGCCAGCAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: RDPGHVCRVNSTHQAYGCSATSW*RASRME
Trigger: CTCCATCCTGCTGGCCCGCAACCAGCTCGTGGCACT...GCAGCCATAGGCTTGGTGGGTGCTGTTCACCCTGCACACATGCCCTGGGTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACCCGGCTGCGTTGAATTaGGGCAGGCACACGGGCGTC +
Preference number: 5 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHPAALN*GRHTGV
Trigger: GACGCCCGTGTGCCTGCCCAAATTCAACGCAGCCGG...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCGTCAGTAGCCATCCTTaGAGCTCTCCTAGGTGTCAT +
Preference number: 5 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGVSSHP*SSPRCH
Trigger: ATGACACCTAGGAGAGCTCAAAGGATGGCTACTGAC...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417270.1
CDS TCA 90 bp CAGGCTCTAGGTAAGAGATGTGTGCGTGGAAGAAGCCGGCTGCGTTaGATTTGGGCAGGCACACGGGCGTCCAGGCCTCGCCCTCGCGAA +
Preference number: 5 (lower is better)
Translates to: QALGKRCVRGRSRLR*IWAGTRASRPRPRE
Trigger: TTCGCGAGGGCGAGGCCTGGACGCCCGTGTGCCTGCCCAAATTCAACGCAGCCGGCTTCTTCCACGCACACATCTCTTACCTAGAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 90 bp CCAAACAGCCTCCCGACTCCACATGTCCCTGTCCCGCTACAGCAGTaGCCTCAAGGCCCTCCCTCACCTGGTGAAGAGTCCCGAGCTCTT +
Preference number: 5 (lower is better)
Translates to: PNSLPTPHVPVPLQQ*PQGPPSPGEESRAL
Trigger: AAGAGCTCGGGACTCTTCACCAGGTGAGGGAGGGCCTTGAGGGCACTGCTGTAGCGGGACAGGGACATGTGGAGTCGGGAGGCTGTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486107.5
CDS-3UTR CAA 90 bp CTCCTGGATGTCCATGGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGGGACTCCCCTGGTACCCTCCTaGTGGCTGTCCCCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: LLDVHGAPCRSAYAMPGTPLVPS*WLSPEA
Trigger: AGCTTCTGGGGACAGCCACAAGGAGGGTACCAGGGG...AGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACCATGGACATCCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCACTCCTGCGCCAGCTCTaGTGCCGACTGCCGCGTACG +
Preference number: 5 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWALLRQL*CRLPRT
Trigger: CGTACGCGGCAGTCGGCACAAGAGCTGGCGCAGGAG...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTACGGAGGAGGATCCAGTGTCTGTATGTGAGTGAGGGTGGATGGGCGAAGGGACTCCTGCGCCAGCTCTaGTGCCGACTGCCGCGTACG +
Preference number: 5 (lower is better)
Translates to: LRRRIQCLYVSEGGWAKGLLRQL*CRLPRT
Trigger: CGTACGCGGCAGTCGGCACAAGAGCTGGCGCAGGAG...TCCCTTCGCCCATCCACCCTCACTCACATACAGACACTGGATCCTCCTCCGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCAGTGCCACGAGCTGGTaGCGGGCCAGCAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPSATSW*RASRME
Trigger: CTCCATCCTGCTGGCCCGCAACCAGCTCGTGGCACT...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCAGTGCCACGAGCTGGTaGCGGGCCAGCAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPSATSW*RASRME
Trigger: CTCCATCCTGCTGGCCCGCAACCAGCTCGTGGCACT...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCCCGGCTGCGTTGAATTaGGGCAGGCACACGGGCGTC +
Preference number: 5 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPPAALN*GRHTGV
Trigger: GACGCCCGTGTGCCTGCCCAAATTCAACGCAGCCGG...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGCAGAGTCCCGAGCTCTTaGACTTATAGAGGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: PTVPARWLGKRGQPPSGGRVPSS*TYRGSD
Trigger: GTCACTTCCTCTATAAGTCAAAGAGCTCGGGACTCT...GCCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS TCA 90 bp CCTGGTACCCTCCTTGTGGCTGTCCCCAGAAGCTGCCCCATCCTCTaGCTCAGTCAGGTCCTCGTAGGAACGGGCATGGACGAACATGGC +
Preference number: 5 (lower is better)
Translates to: PGTLLVAVPRSCPIL*LSQVLVGTGMDEHG
Trigger: GCCATGTTCGTCCATGCCCGTTCCTACGAGGACCTGACTGAGTCAGAGGATGGGGCAGCTTCTGGGGACAGCCACAAGGAGGGTACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000483022.5
ENST00000493206.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCCCCCTGGTACCCTCCTaGTGGCTGTCCCCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPPLVPS*WLSPEA
Trigger: AGCTTCTGGGGACAGCCACAAGGAGGGTACCAGGGG...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGAGAGCGGATGGCGTTCTaGTCTGCCTCCAGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: PPAAKWKLSALCPGSCGRERMAF*SASRKD
Trigger: GTCCTTCCTGGAGGCAGACAAGAACGCCATCCGCTC...TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCGGCTGCGTTGAATTaGGGCAGGCACACGGGCGTC +
Preference number: 5 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHIPAALN*GRHTGV
Trigger: GACGCCCGTGTGCCTGCCCAAATTCAACGCAGCCGG...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTAGGTGGGCTCCGCGCTaGCGAAGGCGCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LPQSTLMHSPTHSPCPLARWAPR*RRRSWK
Trigger: CTTCCAGGAGCGCCTTCGCAAGCGCGGAGCCCACCT...AGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAAGGTGGGCTCCGCGCTaGCGAAGGCGCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARRWAPR*RRRSWK
Trigger: CTTCCAGGAGCGCCTTCGCAAGCGCGGAGCCCACCT...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp ACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGAGGCCAGCCCCCATCTGGAGGAGAGTCCCGAGCTCTTaGACTTATAGAGGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: THSPCPLAGQERPAPIWRRVPSS*TYRGSD
Trigger: GTCACTTCCTCTATAAGTCAAAGAGCTCGGGACTCT...CCTCCAGATGGGGGCTGGCCTCTCTTGCCCAGCCAGCGGGCAGGGACTGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACAGTGGGCGAGAGGCATaGTGGGCACGACTGTGCAAG +
Preference number: 5 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHSGREA*WARLCK
Trigger: CTTGCACAGTCGTGCCCACAATGCCTCTCGCCCACT...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCCTGCTGCACTCCAGCTaGGGTGCCAGAGCAGACCCT +
Preference number: 5 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPLLHSS*GARADP
Trigger: AGGGTCTGCTCTGGCACCCAAGCTGGAGTGCAGCAG...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417270.1
CDS CCA 90 bp CTAATGAGGTTGAAGAGCAGGTGCAGGTCGATGGGGTGCAGAAATTaGTCCTTTCGGCGCACGAGTGCCACGAGCTGGTTGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LMRLKSRCRSMGCRN*SFRRTSATSWLRAS
Trigger: GCTGGCCCGCAACCAGCTCGTGGCACTCGTGCGCCGAAAGGACCAATTTCTGCACCCCATCGACCTGCACCTGCTCTTCAACCTCATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCGAGCGGATGGCGTTCTaGTCTGCCTCCAGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPERMAF*SASRKD
Trigger: GTCCTTCCTGGAGGCAGACAAGAACGCCATCCGCTC...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAAGTGCCACGAGCTGGTaGCGGGCCAGCAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARSATSW*RASRME
Trigger: CTCCATCCTGCTGGCCCGCAACCAGCTCGTGGCACT...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACAAGAAGCCGGCTGCGTaGAATTTGGGCAGGCACACG +
Preference number: 5 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHKKPAA*NLGRHT
Trigger: CGTGTGCCTGCCCAAATTCAACGCAGCCGGCTTCTT...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp ACCAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTAAGGTGGGCTCCGCGCTaGCGAAGGCGCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TRSFPLHMLALPLRTPSLRWAPR*RRRSWK
Trigger: CTTCCAGGAGCGCCTTCGCAAGCGCGGAGCCCACCT...TAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGTCAGGGATGCCCACTaGGGCAACGCTGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPVRDAH*GNAVVG
Trigger: CCCTACTACAGCGTTGCCCAAGTGGGCATCCCTGAC...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCGTCAGGGATGCCCACTaGGGCAACGCTGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPVRDAH*GNAVVG
Trigger: CCCTACTACAGCGTTGCCCAAGTGGGCATCCCTGAC...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCAGTGGGCGAGAGGCATaGTGGGCACGACTGTGCAAG +
Preference number: 5 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPSGREA*WARLCK
Trigger: CTTGCACAGTCGTGCCCACAATGCCTCTCGCCCACT...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCCCAGGCGGTCTTCCTCTTaGCGGATCCAGCGCATCAGC +
Preference number: 5 (lower is better)
Translates to: LWLPTPSVSRKAEPAHIPRRSSS*RIQRIS
Trigger: GCTGATGCGCTGGATCCGCAAAGAGGAAGACCGCCT...GGGAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp GGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGGGACTAGGGTGACTAAGGAGTGGAAGCTCTCTGCATaGTGCCCTGGGTCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: GAPCRSAYAMPGTRVTKEWKLSA*CPGSCG
Trigger: ACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCA...CTCCTTAGTCACCCTAGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS TCA 90 bp CCCAGGCCAGGAGGTTCTCGTTGGGGCCCGTGTAGTAAATGGTCTTaGGTGGGCGAGAGGCATTGTGGGCACGACTGTGCAAGTACTGGT +
Preference number: 5 (lower is better)
Translates to: PRPGGSRWGPCSKWS*VGERHCGHDCASTG
Trigger: ACCAGTACTTGCACAGTCGTGCCCACAATGCCTCTCGCCCACTCAAGACCATTTACTACACGGGCCCCAACGAGAACCTCCTGGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS TCA 90 bp GGGAATCCTAATTCCCCCTGGAGACTGCTCTGGTTGGCAGCTGGCTaGGGCTGTACACTTGCCCATACCTGGCTCCATTCCCTGGGCCAT +
Preference number: 5 (lower is better)
Translates to: GNPNSPWRLLWLAAG*GCTLAHTWLHSLGH
Trigger: ATGGCCCAGGGAATGGAGCCAGGTATGGGCAAGTGTACAGCCTCAGCCAGCTGCCAACCAGAGCAGTCTCCAGGGGGAATTAGGATTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS TCA 90 bp TGCCCTCAAGGCCCTCCCTCACCTGGTGAAGAGTCCCGAGCTCTTTaGCTTATAGAGGAAGTGACGCAGGTCAGGGATGCCCACTTGGGC +
Preference number: 5 (lower is better)
Translates to: CPQGPPSPGEESRAL*LIEEVTQVRDAHLG
Trigger: GCCCAAGTGGGCATCCCTGACCTGCGTCACTTCCTCTATAAGTCAAAGAGCTCGGGACTCTTCACCAGGTGAGGGAGGGCCTTGAGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486107.5
CDS CCA 90 bp CAGCTGGCTGAGGCTGTACACTTGCCCATACCTGGCTCCATTCCCTaGGCCATTCCTGGTGTGGGGCTCTCAGCTCTCTCCATACTCTGT +
Preference number: 5 (lower is better)
Translates to: QLAEAVHLPIPGSIP*AIPGVGLSALSILC
Trigger: ACAGAGTATGGAGAGAGCTGAGAGCCCCACACCAGGAATGGCCCAGGGAATGGAGCCAGGTATGGGCAAGTGTACAGCCTCAGCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS-3UTR CAA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGACCCCTGGTACCCTCCTaGTGGCTGTCCCCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARPLVPS*WLSPEA
Trigger: AGCTTCTGGGGACAGCCACAAGGAGGGTACCAGGGG...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCATGAGCTGCAGCAGGTaGTCGGTGATGCGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPMSCSR*SVMRSE
Trigger: CTCAGAGCGCATCACCGACAACCTGCTGCAGCTCAT...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGATGGGGTGCAGAAATaGGTCCTTTCGGCGCACGAG +
Preference number: 5 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPDGVQK*VLSAHE
Trigger: CTCGTGCGCCGAAAGGACCAATTTCTGCACCCCATC...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCGTCAGGGATGCCCACTaGGGCAACGCTGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFVRDAH*GNAVVG
Trigger: CCCTACTACAGCGTTGCCCAAGTGGGCATCCCTGAC...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCAGTGGGCGAGAGGCATaGTGGGCACGACTGTGCAAG +
Preference number: 5 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFSGREA*WARLCK
Trigger: CTTGCACAGTCGTGCCCACAATGCCTCTCGCCCACT...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTAGTGGGCGAGAGGCATaGTGGGCACGACTGTGCAAG +
Preference number: 5 (lower is better)
Translates to: LLWLPTPSVSRKAEPAHISGREA*WARLCK
Trigger: CTTGCACAGTCGTGCCCACAATGCCTCTCGCCCACT...AATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGGCGGTCTTCCTCTTaGCGGATCCAGCGCATCAGC +
Preference number: 5 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWARRSSS*RIQRIS
Trigger: GCTGATGCGCTGGATCCGCAAAGAGGAAGACCGCCT...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp TCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGCTCCCCGGAGGCTTaGGAATCTGGGCTGGTAGCC +
Preference number: 5 (lower is better)
Translates to: SSPKHFNAFTNPQSLPAGCSPEA*ESGLVA
Trigger: GGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCA...GCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS TCA 90 bp GGTCTTCCTCTTTGCGGATCCAGCGCATCAGCTTATGGATGGCACTaGCGGCTGACGCCTTGGTCCCCAGGGGGCTGTAACACATGTAGA +
Preference number: 5 (lower is better)
Translates to: GLPLCGSSASAYGWH*RLTPWSPGGCNTCR
Trigger: TCTACATGTGTTACAGCCCCCTGGGGACCAAGGCGTCAGCCGTCAGTGCCATCCATAAGCTGATGCGCTGGATCCGCAAAGAGGAAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 90 bp GTCCCGAGCTCTTTGACTTATAGAGGAAGTGACGCAGGTCAGGGATaGCCACTTGGGCAACGCTGTAGTAGGGTGTGCGCAGTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: VPSSLTYRGSDAGQG*PLGQRCSRVCAVPL
Trigger: GAGAGGCACTGCGCACACCCTACTACAGCGTTGCCCAAGTGGGCATCCCTGACCTGCGTCACTTCCTCTATAAGTCAAAGAGCTCGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CCA 90 bp GGCCAGGAGGTTCTCGTTGGGGCCCGTGTAGTAAATGGTCTTGAGTaGGCGAGAGGCATTGTGGGCACGACTGTGCAAGTACTGGTAGAG +
Preference number: 5 (lower is better)
Translates to: GQEVLVGARVVNGLE*ARGIVGTTVQVLVE
Trigger: CTCTACCAGTACTTGCACAGTCGTGCCCACAATGCCTCTCGCCCACTCAAGACCATTTACTACACGGGCCCCAACGAGAACCTCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CCA 90 bp GGCTGTACACTTGCCCATACCTGGCTCCATTCCCTGGGCCATTCCTaGTGTGGGGCTCTCAGCTCTCTCCATACTCTGTCCATCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GCTLAHTWLHSLGHS*CGALSSLHTLSIRR
Trigger: CCTTCTGATGGACAGAGTATGGAGAGAGCTGAGAGCCCCACACCAGGAATGGCCCAGGGAATGGAGCCAGGTATGGGCAAGTGTACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS-3UTR CAA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCGATGGGGTGCAGAAATaGGTCCTTTCGGCGCACGAG +
Preference number: 5 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFDGVQK*VLSAHE
Trigger: CTCGTGCGCCGAAAGGACCAATTTCTGCACCCCATC...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTACGGAGGAGGATCCAGTGTCTGTATGTGAGTGAGGGTGGATGGGCGAAGGGAGATGGGGTGCAGAAATaGGTCCTTTCGGCGCACGAG +
Preference number: 5 (lower is better)
Translates to: LRRRIQCLYVSEGGWAKGDGVQK*VLSAHE
Trigger: CTCGTGCGCCGAAAGGACCAATTTCTGCACCCCATC...TCCCTTCGCCCATCCACCCTCACTCACATACAGACACTGGATCCTCCTCCGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAAGAAGCCGGCTGCGTaGAATTTGGGCAGGCACACG +
Preference number: 5 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAKKPAA*NLGRHT
Trigger: CGTGTGCCTGCCCAAATTCAACGCAGCCGGCTTCTT...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp TCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCAGGCGGTCTTCCTCTTaGCGGATCCAGCGCATCAGC +
Preference number: 5 (lower is better)
Translates to: SSPKHFNAFTNPQSLPAGRRSSS*RIQRIS
Trigger: GCTGATGCGCTGGATCCGCAAAGAGGAAGACCGCCT...GCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCTTGCAAACGATAGCGTaGATGGCTGGAGGCCCCCGT +
Preference number: 5 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFLQTIA*MAGGPR
Trigger: ACGGGGGCCTCCAGCCATCAACGCTATCGTTTGCAA...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645862.1
CDS-3UTR CAA 90 bp GGTGCCCCATGCAGGTCTGCCTATGCCATGCCAGGGACTAGGGTGACTAAGGAGCCCAGAGGCAGTGGTTaGGTGTTCTTACTAGGAGCA +
Preference number: 5 (lower is better)
Translates to: GAPCRSAYAMPGTRVTKEPRGSG*VFLLGA
Trigger: TGCTCCTAGTAAGAACACCAAACCACTGCCTCTGGG...CTCCTTAGTCACCCTAGTCCCTGGCATGGCATAGGCAGACCTGCATGGGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS TCA 90 bp CTCTTTGCGGATCCAGCGCATCAGCTTATGGATGGCACTGACGGCTaGCGCCTTGGTCCCCAGGGGGCTGTAACACATGTAGAGCTCAAA +
Preference number: 5 (lower is better)
Translates to: LFADPAHQLMDGTDG*RLGPQGAVTHVELK
Trigger: TTTGAGCTCTACATGTGTTACAGCCCCCTGGGGACCAAGGCGTCAGCCGTCAGTGCCATCCATAAGCTGATGCGCTGGATCCGCAAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 90 bp GAGGAGGAACTAATGAGGTTGAAGAGCAGGTGCAGGTCGATGGGGTaGAGAAATTGGTCCTTTCGGCGCACGAGTGCCACGAGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: EEELMRLKSRCRSMG*RNWSFRRTSATSWL
Trigger: CAACCAGCTCGTGGCACTCGTGCGCCGAAAGGACCAATTTCTGCACCCCATCGACCTGCACCTGCTCTTCAACCTCATTAGTTCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 90 bp CCCTCGCGAAAGGACGAGGAGGAACTAATGAGGTTGAAGAGCAGGTaGAGGTCGATGGGGTGCAGAAATTGGTCCTTTCGGCGCACGAGT +
Preference number: 5 (lower is better)
Translates to: PSRKDEEELMRLKSR*RSMGCRNWSFRRTS
Trigger: ACTCGTGCGCCGAAAGGACCAATTTCTGCACCCCATCGACCTGCACCTGCTCTTCAACCTCATTAGTTCCTCCTCGTCCTTTCGCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGAGCGGATGGCGTTCTaGTCTGCCTCCAGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLERMAF*SASRKD
Trigger: GTCCTTCCTGGAGGCAGACAAGAACGCCATCCGCTC...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAGATGGGGTGCAGAAATaGGTCCTTTCGGCGCACGAG +
Preference number: 5 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARDGVQK*VLSAHE
Trigger: CTCGTGCGCCGAAAGGACCAATTTCTGCACCCCATC...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp ATCTGGAGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGAGGAACTAATGAGGTaGAAGAGCAGGTGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: IWRLLWLPTPSVSRKAEPEELMR*KSRCRS
Trigger: CGACCTGCACCTGCTCTTCAACCTCATTAGTTCCTC...GGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCTCCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp AAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAAGAAAGAAGCCGGCTGCGTaGAATTTGGGCAGGCACACG +
Preference number: 5 (lower is better)
Translates to: KHFNAFTNPQSLPAGWARKKPAA*NLGRHT
Trigger: CGTGTGCCTGCCCAAATTCAACGCAGCCGGCTTCTT...TCTTGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGTCAGGGATGCCCACTaGGGCAACGCTGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLVRDAH*GNAVVG
Trigger: CCCTACTACAGCGTTGCCCAAGTGGGCATCCCTGAC...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp TGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGAGGCGGTCTTCCTCTTaGCGGATCCAGCGCATCAGC +
Preference number: 5 (lower is better)
Translates to: CLPQSTLMHSPTHSPCPLRRSSS*RIQRIS
Trigger: GCTGATGCGCTGGATCCGCAAAGAGGAAGACCGCCT...CAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CCAAGCCTATGGCTGCTCCCCGGAGGCTTTGGAATCTGGGCTGGTAGCCTGCTGGACACAGTCTTCCCATaGCAAACGATAGCGTTGATG +
Preference number: 5 (lower is better)
Translates to: PSLWLLPGGFGIWAGSLLDTVFP*QTIALM
Trigger: CATCAACGCTATCGTTTGCAATGGGAAGACTGTGTC...CAGCAGGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCAGCCATAGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp GAATGTGTGTGGCCTCATGCTGGTGCAAGGGAGGGAGGAGAGGGGCTCAAATGTTCCAGATCTCGCCTTTaGTATTCCCCAGCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: ECVWPHAGAREGGEGLKCSRSRL*YSPAGD
Trigger: GTCCCCAGCTGGGGAATACAAAAGGCGAGATCTGGA...ACATTTGAGCCCCTCTCCTCCCTCCCTTGCACCAGCATGAGGCCACACACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCTCCAGATCTCGCCTTTaGTATTCCCCAGCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFSRSRL*YSPAGD
Trigger: GTCCCCAGCTGGGGAATACAAAAGGCGAGATCTGGA...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCTGGTTGAGTAGTCTTTaGTGGCATGCAGCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFWLSSL*WHAAGG
Trigger: GCCCCCTGCTGCATGCCACAAAAGACTACTCAACCA...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGAACCCTCAGCTCACTCTaGAGGACCATTTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: PPAAKWKLSALCPGSCGRTLSSL*RTIWRN
Trigger: ATTCCTCCAAATGGTCCTCAAGAGTGAGCTGAGGGT...TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCACCAGGTCCTTCCCTTaGCACATGCTGGCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFTRSFP*HMLALP
Trigger: TGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGT...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CCCCCGGCAGCAAAGTGGAAGCTCTCTGCATTGTGCCCTGGGTCCTGTGGTAGAGTCAGTAGCCATCCTTaGAGCTCTCCTGTAATCCCA +
Preference number: 5 (lower is better)
Translates to: PPAAKWKLSALCPGSCGRVSSHP*SSPVIP
Trigger: TGGGATTACAGGAGAGCTCAAAGGATGGCTACTGAC...TCTACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCACTTTGCTGCCGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642691.1
CDS GCA 90 bp TACCTTGTAGCCATCTGCATGGATGGAGCGGATGGCGTTCTTGTCTaGCTCCAGGAAGGACACCAGGGCCACCATAACACCCATAGTGCT +
Preference number: 5 (lower is better)
Translates to: YLVAICMDGADGVLV*LQEGHQGHHNTHSA
Trigger: AGCACTATGGGTGTTATGGTGGCCCTGGTGTCCTTCCTGGAGGCAGACAAGAACGCCATCCGCTCCATCCATGCAGATGGCTACAAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS GCA 90 bp GCCAGTTATTGTCCTTCTCCCCAACTACAATGGTACCCAGTAAGGTaGCGGAACGCAGCACCTCACCCTGTGTCTGGAGCACTGCCCATA +
Preference number: 5 (lower is better)
Translates to: ASYCPSPQLQWYPVR*RNAAPHPVSGALPI
Trigger: TATGGGCAGTGCTCCAGACACAGGGTGAGGTGCTGCGTTCCGGCACCTTACTGGGTACCATTGTAGTTGGGGAGAAGGACAATAACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS CCA 90 bp TACACTTGCCCATACCTGGCTCCATTCCCTGGGCCATTCCTGGTGTaGGGCTCTCAGCTCTCTCCATACTCTGTCCATCAGAAGGAGTCA +
Preference number: 5 (lower is better)
Translates to: YTCPYLAPFPGPFLV*GSQLSPYSVHQKES
Trigger: TGACTCCTTCTGATGGACAGAGTATGGAGAGAGCTGAGAGCCCCACACCAGGAATGGCCCAGGGAATGGAGCCAGGTATGGGCAAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS-3UTR CAA 90 bp CCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTGGGCAGAGGAACTAATGAGGTaGAAGAGCAGGTGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: PKHFNAFTNPQSLPAGWAEELMR*KSRCRS
Trigger: CGACCTGCACCTGCTCTTCAACCTCATTAGTTCCTC...TGCCCAGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp TCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACATTCGAGGAACTAATGAGGTaGAAGAGCAGGTGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: SYGFPHLVCPGRLSPHTFEELMR*KSRCRS
Trigger: CGACCTGCACCTGCTCTTCAACCTCATTAGTTCCTC...GAATGTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTACCAGGTCCTTCCCTTaGCACATGCTGGCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: LPQSTLMHSPTHSPCPLATRSFP*HMLALP
Trigger: TGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTGGT...AGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTACGGAGGAGGATCCAGTGTCTGTATGTGAGTGAGGGTGGATGGGCGAAGGGAGCTGAGACAGGAGAATaGCTTGAACTGGAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LRRRIQCLYVSEGGWAKGAETGE*LELERQ
Trigger: CTGCCTCTCCAGTTCAAGCAATTCTCCTGTCTCAGC...TCCCTTCGCCCATCCACCCTCACTCACATACAGACACTGGATCCTCCTCCGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642691.1
CDS TCA 90 bp AGGCATTCGCTGCTTCTCTTCCTCTGCATGTCAGTAGCCATCCTTTaGGCTCTCCTAGGTGTCATGACGGGCGCCTGTAATCCCAACTGC +
Preference number: 5 (lower is better)
Translates to: RHSLLLFLCMSVAIL*ALLGVMTGACNPNC
Trigger: GCAGTTGGGATTACAGGCGCCCGTCATGACACCTAGGAGAGCTCAAAGGATGGCTACTGACATGCAGAGGAAGAGAAGCAGCGAATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417270.1
CDS-3UTR CAA 90 bp GTGTACCCTGGGTCCATGTCACCCACACAGGCTCATTCTTCAATATGGCTTGATGAGCGGATGGCGTTCTaGTCTGCCTCCAGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: VYPGSMSPTQAHSSIWLDERMAF*SASRKD
Trigger: GTCCTTCCTGGAGGCAGACAAGAACGCCATCCGCTC...ATCAAGCCATATTGAAGAATGAGCCTGTGTGGGTGACATGGACCCAGGGTACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp TCACTGTTGACCAGAATGCCAGTAACAATCAGGGACAGCTGGCTTGGCATCACCATGAGCTGCAGCAGGTaGTCGGTGATGCGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: SLLTRMPVTIRDSWLGITMSCSR*SVMRSE
Trigger: CTCAGAGCGCATCACCGACAACCTGCTGCAGCTCAT...GGTGATGCCAAGCCAGCTGTCCCTGATTGTTACTGGCATTCTGGTCAACAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp AGGCTCCTATGGCTTCCCACACCTAGTGTGTCCAGGAAGGCTGAGCCCGCACACAAAGGGACGTTAGGATaGTTTCTCCCACTGATTGTG +
Preference number: 5 (lower is better)
Translates to: RLLWLPTPSVSRKAEPAHKGTLG*FLPLIV
Trigger: CACAATCAGTGGGAGAAACAATCCTAACGTCCCTTT...GTGTGCGGGCTCAGCCTTCCTGGACACACTAGGTGTGGGAAGCCATAGGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417270.1
CDS-3UTR CAA 90 bp CAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTATTTGGAAGCTCTCTGCATaGTGCCCTGGGTCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: QVLPFAHAGSSTTNTFPIWKLSA*CPGSCG
Trigger: ACCACAGGACCCAGGGCACAATGCAGAGAGCTTCCA...AATAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp GCGAAGGGACAAGTGACAGAGCTTGACAAGTGTCTTCCCCAAAGCACTTTAATGTGCTCCCCGGAGGCTTaGGAATCTGGGCTGGTAGCC +
Preference number: 5 (lower is better)
Translates to: AKGQVTELDKCLPQSTLMCSPEA*ESGLVA
Trigger: GGCTACCAGCCCAGATTCCAAAGCCTCCGGGGAGCA...CATTAAAGTGCTTTGGGGAAGACACTTGTCAAGCTCTGTCACTTGTCCCTTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS GCA 90 bp CTATTCCTATCCAGGAAGACTCTATCTTATGTCCTACCCTCCAGGTaGTCCCTTAGGACAGGGCATTGTCTCCCCACCATAGCAGGCACC +
Preference number: 5 (lower is better)
Translates to: LFLSRKTLSYVLPSR*SLRTGHCLPTIAGT
Trigger: GGTGCCTGCTATGGTGGGGAGACAATGCCCTGTCCTAAGGGAGCACCTGGAGGGTAGGACATAAGATAGAGTCTTCCTGGATAGGAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486107.5
CDS CCA 90 bp AAAAAGTGGTTGGGAATCCTAATTCCCCCTGGAGACTGCTCTGGTTaGCAGCTGGCTGAGGCTGTACACTTGCCCATACCTGGCTCCATT +
Preference number: 5 (lower is better)
Translates to: KKWLGILIPPGDCSG*QLAEAVHLPIPGSI
Trigger: AATGGAGCCAGGTATGGGCAAGTGTACAGCCTCAGCCAGCTGCCAACCAGAGCAGTCTCCAGGGGGAATTAGGATTCCCAACCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS CCA 90 bp AGTAGCCATCCTTTGAGCTCTCCGAGGCTGGTAGCAAGGCTTATTTaGCCTCTAGGGTCCTTCAATGGCAGGCTGAAGGATCCTCACTTG +
Preference number: 5 (lower is better)
Translates to: SSHPLSSPRLVARLI*PLGSFNGRLKDPHL
Trigger: CAAGTGAGGATCCTTCAGCCTGCCATTGAAGGACCCTAGAGGCCAAATAAGCCTTGCTACCAGCCTCGGAGAGCTCAAAGGATGGCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483022.5
CDS-3UTR CAA 90 bp GTGTACCCTGGGTCCATGTCACCCACACAGGCTCATTCTTCAATATGGCTTGATGATGGGGTGCAGAAATaGGTCCTTTCGGCGCACGAG +
Preference number: 5 (lower is better)
Translates to: VYPGSMSPTQAHSSIWLDDGVQK*VLSAHE
Trigger: CTCGTGCGCCGAAAGGACCAATTTCTGCACCCCATC...ATCAAGCCATATTGAAGAATGAGCCTGTGTGGGTGACATGGACCCAGGGTACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp GTGTACCCTGGGTCCATGTCACCCACACAGGCTCATTCTTCAATATGGCTTGATAAGAAGCCGGCTGCGTaGAATTTGGGCAGGCACACG +
Preference number: 5 (lower is better)
Translates to: VYPGSMSPTQAHSSIWLDKKPAA*NLGRHT
Trigger: CGTGTGCCTGCCCAAATTCAACGCAGCCGGCTTCTT...ATCAAGCCATATTGAAGAATGAGCCTGTGTGGGTGACATGGACCCAGGGTACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS TCA 90 bp GGCGAGCAGCATAACATGAAGTGGAGAGGAAAGCCAGATGCAGAATaGGCCTGGCCTCCTGCCTTATCCCCAGAACCTGACAAATATCCA +
Preference number: 5 (lower is better)
Translates to: GEQHNMKWRGKPDAE*AWPPALSPEPDKYP
Trigger: TGGATATTTGTCAGGTTCTGGGGATAAGGCAGGAGGCCAGGCTCATTCTGCATCTGGCTTTCCTCTCCACTTCATGTTATGCTGCTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS CCA 90 bp TCCGAGGCTGGTAGCAAGGCTTATTTGGCCTCTAGGGTCCTTCAATaGCAGGCTGAAGGATCCTCACTTGTCAGGCAACATACAGTTCAC +
Preference number: 5 (lower is better)
Translates to: SEAGSKAYLASRVLQ*QAEGSSLVRQHTVH
Trigger: GTGAACTGTATGTTGCCTGACAAGTGAGGATCCTTCAGCCTGCCATTGAAGGACCCTAGAGGCCAAATAAGCCTTGCTACCAGCCTCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483022.5
CDS-3UTR CAA 90 bp AAGTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGGAGGAACTAATGAGGTaGAAGAGCAGGTGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: KCLPQSTLMHSPTHSPCPEELMR*KSRCRS
Trigger: CGACCTGCACCTGCTCTTCAACCTCATTAGTTCCTC...CGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTGGCTAGAGTCCCGAGCTCTTaGACTTATAGAGGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: LPQSTLMHSPTHSPCPLARVPSS*TYRGSD
Trigger: GTCACTTCCTCTATAAGTCAAAGAGCTCGGGACTCT...AGCCAGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS TCA 90 bp GACTCTGGGCCTCTCCGTCCGAGCCAGCTAGCAGTTCATTTCAAGTaGGAGAAAGGGACGTTAGGATTGTTTCTCCCACTGATTGTGGAA +
Preference number: 5 (lower is better)
Translates to: DSGPLRPSQLAVHFK*EKGTLGLFLPLIVE
Trigger: TTCCACAATCAGTGGGAGAAACAATCCTAACGTCCCTTTCTCTCACTTGAAATGAACTGCTAGCTGGCTCGGACGGAGAGGCCCAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417270.1
CDS-3UTR CAA 90 bp ATTCAGAGGACAGTTTTCTCCAATAAGTACTTCCTAGGCCTTGTGTTCCCTGGGAAGAAGCCGGCTGCGTaGAATTTGGGCAGGCACACG +
Preference number: 5 (lower is better)
Translates to: IQRTVFSNKYFLGLVFPGKKPAA*NLGRHT
Trigger: CGTGTGCCTGCCCAAATTCAACGCAGCCGGCTTCTT...CCCAGGGAACACAAGGCCTAGGAAGTACTTATTGGAGAAAACTGTCCTCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp GTGTCTTCCCCAAAGCACTTTAATGCATTCACCAACCCACAGTCCCTGCCCGCTAGAGTCCCGAGCTCTTaGACTTATAGAGGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: VSSPKHFNAFTNPQSLPARVPSS*TYRGSD
Trigger: GTCACTTCCTCTATAAGTCAAAGAGCTCGGGACTCT...AGCGGGCAGGGACTGTGGGTTGGTGAATGCATTAAAGTGCTTTGGGGAAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296473.7
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp AACTACAGCAACCCATTAAACAGAGCCACAGCGAGGGCTCTGAAGGTGGTTGAGCTTAGGGGCTCACTGTaGACCAGAATGCCAGTAACA +
Preference number: 5 (lower is better)
Translates to: NYSNPLNRATARALKVVELRGSL*TRMPVT
Trigger: TGTTACTGGCATTCTGGTCAACAGTGAGCCCCTAAG...CTCAACCACCTTCAGAGCCCTCGCTGTGGCTCTGTTTAATGGGTTGCTGTAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTATTAGACAGGAGAATTGCTaGAACTGGAGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: QVLPFAHAGSSTTNTFPIRQENC*NWRGRG
Trigger: ACCTCTGCCTCTCCAGTTCAAGCAATTCTCCTGTCT...AATAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642691.1
CDS CCA 90 bp AGGGACCCCGGAGACCTCTGTTCCAGTTTCCTTCTCTGGGTATATTaGGCATTTCCAGGCCTTCTGGTTAATAAAGTAGAGAGGGTATGC +
Preference number: 5 (lower is better)
Translates to: RDPGDLCSSFLLWVY*AFPGLLVNKVERVC
Trigger: GCATACCCTCTCTACTTTATTAACCAGAAGGCCTGGAAATGCCCAATATACCCAGAGAAGGAAACTGGAACAGAGGTCTCCGGGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486107.5
CDS-3UTR CAA 90 bp ACACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCCTCCTGCGCCAGCTCTaGTGCCGACTGCCGCGTACG +
Preference number: 5 (lower is better)
Translates to: TQAHSSIWLDFSSRKYWLLLRQL*CRLPRT
Trigger: CGTACGCGGCAGTCGGCACAAGAGCTGGCGCAGGAG...GAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp GTGTACCCTGGGTCCATGTCACCCACACAGGCTCATTCTTCAATATGGCTTGATACCCTCAGCTCACTCTaGAGGACCATTTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: VYPGSMSPTQAHSSIWLDTLSSL*RTIWRN
Trigger: ATTCCTCCAAATGGTCCTCAAGAGTGAGCTGAGGGT...ATCAAGCCATATTGAAGAATGAGCCTGTGTGGGTGACATGGACCCAGGGTACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp GCGAAGGGACAAGTGACAGAGCTTGACAAGTGTCTTCCCCAAAGCACTTTAATGCCCAGAGGCAGTGGTTaGGTGTTCTTACTAGGAGCA +
Preference number: 5 (lower is better)
Translates to: AKGQVTELDKCLPQSTLMPRGSG*VFLLGA
Trigger: TGCTCCTAGTAAGAACACCAAACCACTGCCTCTGGG...CATTAAAGTGCTTTGGGGAAGACACTTGTCAAGCTCTGTCACTTGTCCCTTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp GTGTACCCTGGGTCCATGTCACCCACACAGGCTCATTCTTCAATATGGCTTGATCTTAGGGGCTCACTGTaGACCAGAATGCCAGTAACA +
Preference number: 5 (lower is better)
Translates to: VYPGSMSPTQAHSSIWLDLRGSL*TRMPVT
Trigger: TGTTACTGGCATTCTGGTCAACAGTGAGCCCCTAAG...ATCAAGCCATATTGAAGAATGAGCCTGTGTGGGTGACATGGACCCAGGGTACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS TCA 90 bp TTTAGATGTCCAAGACAGAGTGACAGATCTGGAGTAGAGGAAAGGTaGGCTAGGAATCCTGTGGGCCAAAAGGGACAAAGGGAGGCCATA +
Preference number: 5 (lower is better)
Translates to: FRCPRQSDRSGVEER*ARNPVGQKGQREAI
Trigger: TATGGCCTCCCTTTGTCCCTTTTGGCCCACAGGATTCCTAGCTCACCTTTCCTCTACTCCAGATCTGTCACTCTGTCTTGGACATCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486107.5
CDS GCA 90 bp TCTCTCTTGCGAATTCAGCCCTGTACCAGGCACTGGGGATATAACTaGTCTGCGCTCAAAGTGTTCACAATCTTGTGGAAGAGAGAGATG +
Preference number: 5 (lower is better)
Translates to: SLLRIQPCTRHWGYN*SALKVFTILWKREM
Trigger: CATCTCTCTCTTCCACAAGATTGTGAACACTTTGAGCGCAGAGCAGTTATATCCCCAGTGCCTGGTACAGGGCTGAATTCGCAAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS-3UTR CAA 90 bp ACACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCCCGGCTGCGTTGAATTaGGGCAGGCACACGGGCGTC +
Preference number: 5 (lower is better)
Translates to: TQAHSSIWLDFSSRKYWLPAALN*GRHTGV
Trigger: GACGCCCGTGTGCCTGCCCAAATTCAACGCAGCCGG...GAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp AACTACAGCAACCCATTAAACAGAGCCACAGCGAGGGCTCTGAAGGTGGTTGAGAGTGATATACAATCCTaGGCTTCCCAAAGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: NYSNPLNRATARALKVVESDIQS*ASQSVG
Trigger: CCCAACACTTTGGGAAGCCAAGGATTGTATATCACT...CTCAACCACCTTCAGAGCCCTCGCTGTGGCTCTGTTTAATGGGTTGCTGTAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CAGGTCCTTCCCTTTGCACATGCTGGCTCTTCCACTACGAACACCTTCCCTATTAGTGATATACAATCCTaGGCTTCCCAAAGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: QVLPFAHAGSSTTNTFPISDIQS*ASQSVG
Trigger: CCCAACACTTTGGGAAGCCAAGGATTGTATATCACT...AATAGGGAAGGTGTTCGTAGTGGAAGAGCCAGCATGTGCAAAGGGAAGGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCCCCAGAGAGGAACTAATGAGGTaGAAGAGCAGGTGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: LGAYSPRYTHLSNYDLPREELMR*KSRCRS
Trigger: CGACCTGCACCTGCTCTTCAACCTCATTAGTTCCTC...TCTGGGGAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTAGGTGCCTATAGTCCTAGGTATACACATTTATCCAACTATGATCTCCCCAGAGAACACCTTCCCTATTaGTCTGTCTTCCCACCCCTG +
Preference number: 5 (lower is better)
Translates to: LGAYSPRYTHLSNYDLPREHLPY*SVFPPL
Trigger: CAGGGGTGGGAAGACAGACAAATAGGGAAGGTGTTC...TCTGGGGAGATCATAGTTGGATAAATGTGTATACCTAGGACTATAGGCACCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS TCA 90 bp GAGCCTGGCCTCCTGCCTTATCCCCAGAACCTGACAAATATCCAATaGGTGACTGACAAATGCATGAATAAGTGGAAAGGAAAAAGTGGT +
Preference number: 5 (lower is better)
Translates to: EPGLLPYPQNLTNIQ*VTDKCMNKWKGKSG
Trigger: ACCACTTTTTCCTTTCCACTTATTCATGCATTTGTCAGTCACTCATTGGATATTTGTCAGGTTCTGGGGATAAGGCAGGAGGCCAGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS-3UTR CAA 90 bp ACACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCATGAGCTGCAGCAGGTaGTCGGTGATGCGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: TQAHSSIWLDFSSRKYWLMSCSR*SVMRSE
Trigger: CTCAGAGCGCATCACCGACAACCTGCTGCAGCTCAT...GAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp AGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTGTCAGGGATGCCCACTaGGGCAACGCTGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: RLILQYGLILVAENIGSTVRDAH*GNAVVG
Trigger: CCCTACTACAGCGTTGCCCAAGTGGGCATCCCTGAC...AGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp CTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAACTCTCGTCAGTAGCCATCCTTaGAGCTCTCCTGGCCACTGC +
Preference number: 5 (lower is better)
Translates to: LILQYGLILVAENIGSTLVSSHP*SSPGHC
Trigger: GCAGTGGCCAGGAGAGCTCAAAGGATGGCTACTGAC...GAGAGTTGAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645862.1
CDS-3UTR CAA 90 bp ACACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCAGAGTCCCGAGCTCTTaGACTTATAGAGGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: TQAHSSIWLDFSSRKYWLRVPSS*TYRGSD
Trigger: GTCACTTCCTCTATAAGTCAAAGAGCTCGGGACTCT...GAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS-3UTR CAA 90 bp ACACAGGCTCATTCTTCAATATGGCTTGATTTTAGTAGCAGAAAATATTGGCTCGACACAGTCTTCCCATaGCAAACGATAGCGTTGATG +
Preference number: 5 (lower is better)
Translates to: TQAHSSIWLDFSSRKYWLDTVFP*QTIALM
Trigger: CATCAACGCTATCGTTTGCAATGGGAAGACTGTGTC...GAGCCAATATTTTCTGCTACTAAAATCAAGCCATATTGAAGAATGAGCCTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642691.1
ENST00000645862.1
CDS CCA 72 bp AGAAGACCAGGCTGCGCGCACGCGCCTGCTGCAGGCTaGCGCTCACAGTGTCGCGCACGGCCGCCGCCAGGG +
Preference number: 6 (lower is better)
Translates to: RRPGCAHAPAAG*RSQCRARPPPG
Trigger: CCCTGGCGGCGGCCGTGCGCGACACTGTGAGCGCCAGCCTGCAGCAGGCGCGTGCGCGCAGCCTGGTCTTCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 72 bp CAGAGCCGTGGGCAGGTCCTGACCCGGGTCCGCGATTaGCTCATCCGGCGCCGCCTTCTAGGGGCCTGGGCG +
Preference number: 6 (lower is better)
Translates to: QSRGQVLTRVRD*LIRRRLLGAWA
Trigger: CGCCCAGGCCCCTAGAAGGCGGCGCCGGATGAGGCAATCGCGGACCCGGGTCAGGACCTGCCCACGGCTCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS GCA 72 bp GCAGTGCCTCTCGCAGGGCCAGGTGGGCTCCGCGCTTaGGAAGGCGCTCCTGGAAGCGGCGGCGGCAGTCAG +
Preference number: 6 (lower is better)
Translates to: AVPLAGPGGLRA*EGAPGSGGGSQ
Trigger: CTGACTGCCGCCGCCGCTTCCAGGAGCGCCTTCGCAAGCGCGGAGCCCACCTGGCCCTGCGAGAGGCACTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CAA 72 bp GCAGAGCCGTGGGCAGGTCCTGACCCGGGTCCGCGATaGCCTCATCCGGCGCCGCCTTCTAGGGGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: AEPWAGPDPGPR*PHPAPPSRGLG
Trigger: GCCCAGGCCCCTAGAAGGCGGCGCCGGATGAGGCAATCGCGGACCCGGGTCAGGACCTGCCCACGGCTCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS CAA 72 bp CGCAGTGCCTCTCGCAGGGCCAGGTGGGCTCCGCGCTaGCGAAGGCGCTCCTGGAAGCGGCGGCGGCAGTCA +
Preference number: 6 (lower is better)
Translates to: RSASRRARWAPR*RRRSWKRRRQS
Trigger: TGACTGCCGCCGCCGCTTCCAGGAGCGCCTTCGCAAGCGCGGAGCCCACCTGGCCCTGCGAGAGGCACTGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CAA 90 bp CTAGTCCCAGCAGAGCCGTGGGCAGGTCCTGACCCGGGTCCGCGATaGCCTCATCCGGCGCCGCCTTCTAGGGGCCTGGGCGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LVPAEPWAGPDPGPR*PHPAPPSRGLGASS
Trigger: GGAGGAGGCGCCCAGGCCCCTAGAAGGCGGCGCCGGATGAGGCAATCGCGGACCCGGGTCAGGACCTGCCCACGGCTCTGCTGGGACTAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS TCA 72 bp TGGGCTCCTAGTCCCAGCAGAGCCGTGGGCAGGTCCTaGCCCGGGTCCGCGATTGCCTCATCCGGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: WAPSPSRAVGRS*PGSAIASSGAA
Trigger: GGCGGCGCCGGATGAGGCAATCGCGGACCCGGGTCAGGACCTGCCCACGGCTCTGCTGGGACTAGGAGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS GCA 72 bp AGGATGGAGAAGACCAGGCTGCGCGCACGCGCCTGCTaGAGGCTGGCGCTCACAGTGTCGCGCACGGCCGCC +
Preference number: 6 (lower is better)
Translates to: RMEKTRLRARAC*RLALTVSRTAA
Trigger: GGCGGCCGTGCGCGACACTGTGAGCGCCAGCCTGCAGCAGGCGCGTGCGCGCAGCCTGGTCTTCTCCATCCT
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 72 bp AGCAGGATGGAGAAGACCAGGCTGCGCGCACGCGCCTaGTGCAGGCTGGCGCTCACAGTGTCGCGCACGGCC +
Preference number: 6 (lower is better)
Translates to: SRMEKTRLRARA*CRLALTVSRTA
Trigger: GGCCGTGCGCGACACTGTGAGCGCCAGCCTGCAGCAGGCGCGTGCGCGCAGCCTGGTCTTCTCCATCCTGCT
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 72 bp GTCCAGGACGCACAGAAGGTGCCGGTCACTGCCCTCTaGCGGACCCATGGAGGGGTAAGGGTGTCCGGCCGG +
Preference number: 6 (lower is better)
Translates to: VQDAQKVPVTAL*RTHGGVRVSGR
Trigger: CCGGCCGGACACCCTTACCCCTCCATGGGTCCGGCAGAGGGCAGTGACCGGCACCTTCTGTGCGTCCTGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000473451.1
ENST00000483022.5
ENST00000486107.5
CDS GCA 72 bp GCCCACTTGGGCAACGCTGTAGTAGGGTGTGCGCAGTaGCTCTCGCAGGGCCAGGTGGGCTCCGCGCTTGCG +
Preference number: 6 (lower is better)
Translates to: AHLGNAVVGCAQ*LSQGQVGSALA
Trigger: CGCAAGCGCGGAGCCCACCTGGCCCTGCGAGAGGCACTGCGCACACCCTACTACAGCGTTGCCCAAGTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CCA 72 bp GTCCTTAGCGTTTGGCCGCCTGCGGCGCCGAGGGACTaGTTCTGGGCTCCTAGTCCCAGCAGAGCCGTGGGC +
Preference number: 6 (lower is better)
Translates to: VLSVWPPAAPRD*FWAPSPSRAVG
Trigger: GCCCACGGCTCTGCTGGGACTAGGAGCCCAGAACCAGTCCCTCGGCGCCGCAGGCGGCCAAACGCTAAGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS CCA 72 bp AGGGCCAGGTGGGCTCCGCGCTTGCGAAGGCGCTCCTaGAAGCGGCGGCGGCAGTCAGAGACTGCAAAGAAG +
Preference number: 6 (lower is better)
Translates to: RARWAPRLRRRS*KRRRQSETAKK
Trigger: CTTCTTTGCAGTCTCTGACTGCCGCCGCCGCTTCCAGGAGCGCCTTCGCAAGCGCGGAGCCCACCTGGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 72 bp GCACCGTGCCGCCCCCATCAGGAAGCTGGGGTCTCGTaGCATGAGCTGCAGCAGGTTGTCGGTGATGCGCTC +
Preference number: 6 (lower is better)
Translates to: APCRPHQEAGVS*HELQQVVGDAL
Trigger: GAGCGCATCACCGACAACCTGCTGCAGCTCATGGCACGAGACCCCAGCTTCCTGATGGGGGCGGCACGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CCA 72 bp CGCGATTGCCTCATCCGGCGCCGCCTTCTAGGGGCCTaGGCGCCTCCTCCGAGTCTAGAGTCCCACACAGAA +
Preference number: 6 (lower is better)
Translates to: RDCLIRRRLLGA*APPPSLESHTE
Trigger: TTCTGTGTGGGACTCTAGACTCGGAGGAGGCGCCCAGGCCCCTAGAAGGCGGCGCCGGATGAGGCAATCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS CCA 72 bp GGGACTGGTTCTGGGCTCCTAGTCCCAGCAGAGCCGTaGGCAGGTCCTGACCCGGGTCCGCGATTGCCTCAT +
Preference number: 6 (lower is better)
Translates to: GTGSGLLVPAEP*AGPDPGPRLPH
Trigger: ATGAGGCAATCGCGGACCCGGGTCAGGACCTGCCCACGGCTCTGCTGGGACTAGGAGCCCAGAACCAGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS GCA 72 bp GCCCCCATCAGGAAGCTGGGGTCTCGTGCCATGAGCTaGAGCAGGTTGTCGGTGATGCGCTCTGAGCCCGAG +
Preference number: 6 (lower is better)
Translates to: APIRKLGSRAMS*SRLSVMRSEPE
Trigger: CTCGGGCTCAGAGCGCATCACCGACAACCTGCTGCAGCTCATGGCACGAGACCCCAGCTTCCTGATGGGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 72 bp CCTAGGACCTCCATAAAGCCCAGCCCATCCCAGGGCTaGCTTACCCAGGCCAGGAGGTTCTCGTTGGGGCCC +
Preference number: 6 (lower is better)
Translates to: PRTSIKPSPSQG*LTQARRFSLGP
Trigger: GGGCCCCAACGAGAACCTCCTGGCCTGGGTAAGGCAGCCCTGGGATGGGCTGGGCTTTATGGAGGTCCTAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486107.5
CDS GCA 72 bp TCCTGTTTCTCAGAGGAGTCCAGGACGCACAGAAGGTaGCGGTCACTGCCCTCTGCCGGACCCATGGAGGGG +
Preference number: 6 (lower is better)
Translates to: SCFSEESRTHRR*RSLPSAGPMEG
Trigger: CCCCTCCATGGGTCCGGCAGAGGGCAGTGACCGGCACCTTCTGTGCGTCCTGGACTCCTCTGAGAAACAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000455683.6
ENST00000473451.1
ENST00000483022.5
ENST00000486107.5
CDS GCA 72 bp CTCCCGACTCCACATGTCCCTGTCCCGCTACAGCAGTaGCCTCAAGGCCCTCCCTCACCTGGTGAAGAGTCC +
Preference number: 6 (lower is better)
Translates to: LPTPHVPVPLQQ*PQGPPSPGEES
Trigger: GGACTCTTCACCAGGTGAGGGAGGGCCTTGAGGGCACTGCTGTAGCGGGACAGGGACATGTGGAGTCGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486107.5
CDS CCA 72 bp CCGGGGTGCATTGTGGGAAATGTAGTCCTTAGCGTTTaGCCGCCTGCGGCGCCGAGGGACTGGTTCTGGGCT +
Preference number: 6 (lower is better)
Translates to: PGCIVGNVVLSV*PPAAPRDWFWA
Trigger: AGCCCAGAACCAGTCCCTCGGCGCCGCAGGCGGCCAAACGCTAAGGACTACATTTCCCACAATGCACCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296473.7
ENST00000417270.1
CDS CCA 72 bp CTGGCCCGCACCTGGCTCCATTCCCTGGGCCATTCCTaGTGTGGGGCTCTCAGCTCTCTCCATACTCTGTCC +
Preference number: 6 (lower is better)
Translates to: LARTWLHSLGHS*CGALSSLHTLS
Trigger: GGACAGAGTATGGAGAGAGCTGAGAGCCCCACACCAGGAATGGCCCAGGGAATGGAGCCAGGTGCGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000483022.5
ENST00000493206.1
ENST00000642691.1
ENST00000645862.1
CDS CCA 72 bp AGCTGGGTGCTTAGCTCGCTAAAGTCCTGGCTGATCTaGCGCATGTCTGTAGGCAGCGGCGGGGGACCCCTG +
Preference number: 6 (lower is better)
Translates to: SWVLSSLKSWLI*RMSVGSGGGPL
Trigger: CAGGGGTCCCCCGCCGCTGCCTACAGACATGCGCCAGATCAGCCAGGACTTTAGCGAGCTAAGCACCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000483022.5
ENST00000493206.1
ENST00000642691.1
ENST00000645862.1
CDS CCA 72 bp CAAAGACATGCTTCTGGTGCAGGCGCCATGCCTCCGTaGCATCCTCCTCATCCCCCTCGGTTGTGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: QRHASGAGAMPP*HPPHPPRLCPP
Trigger: GGGAGGGCACAACCGAGGGGGATGAGGAGGATGCCACGGAGGCATGGCGCCTGCACCAGAAGCATGTCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000483022.5
ENST00000642691.1
ENST00000645862.1
CDS CAA 90 bp GCCCCCATCAGGAAGCTGGGGTCTCGTGCCATGAGCTGCAGCAGGTaGTCGGTGATGCGCTCTGAGCCCGAGAGTAGGCGCCGCAAATCA +
Preference number: 6 (lower is better)
Translates to: APIRKLGSRAMSCSR*SVMRSEPESRRRKS
Trigger: TGATTTGCGGCGCCTACTCTCGGGCTCAGAGCGCATCACCGACAACCTGCTGCAGCTCATGGCACGAGACCCCAGCTTCCTGATGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS TCA 72 bp GGTAAGAGATGTGTGCGTGGAAGAAGCCGGCTGCGTTaGATTTGGGCAGGCACACGGGCGTCCAGGCCTCGC +
Preference number: 6 (lower is better)
Translates to: GKRCVRGRSRLR*IWAGTRASRPR
Trigger: GCGAGGCCTGGACGCCCGTGTGCCTGCCCAAATTCAACGCAGCCGGCTTCTTCCACGCACACATCTCTTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CCA 72 bp ACACCCGTCAGCTGGGTGCTTAGCTCGCTAAAGTCCTaGCTGATCTGGCGCATGTCTGTAGGCAGCGGCGGG +
Preference number: 6 (lower is better)
Translates to: TPVSWVLSSLKS*LIWRMSVGSGG
Trigger: CCCGCCGCTGCCTACAGACATGCGCCAGATCAGCCAGGACTTTAGCGAGCTAAGCACCCAGCTGACGGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000483022.5
ENST00000493206.1
ENST00000642691.1
ENST00000645862.1
CDS TCA 72 bp CTTTGCGGATCCAGCGCATCAGCTTATGGATGGCACTaGCGGCTGACGCCTTGGTCCCCAGGGGGCTGTAAC +
Preference number: 6 (lower is better)
Translates to: LCGSSASAYGWH*RLTPWSPGGCN
Trigger: GTTACAGCCCCCTGGGGACCAAGGCGTCAGCCGTCAGTGCCATCCATAAGCTGATGCGCTGGATCCGCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 72 bp GATGGGGTGCAGAAATTGGTCCTTTCGGCGCACGAGTaGCACGAGCTGGTTGCGGGCCAGCAGGATGGAGAA +
Preference number: 6 (lower is better)
Translates to: DGVQKLVLSAHE*HELVAGQQDGE
Trigger: TTCTCCATCCTGCTGGCCCGCAACCAGCTCGTGGCACTCGTGCGCCGAAAGGACCAATTTCTGCACCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 72 bp AAGGCGCTCCTGGAAGCGGCGGCGGCAGTCAGAGACTaGAAAGAAGTCCTCACGGTCAGTGGAGACAAGCAG +
Preference number: 6 (lower is better)
Translates to: KALLEAAAAVRD*KEVLTVSGDKQ
Trigger: CTGCTTGTCTCCACTGACCGTGAGGACTTCTTTGCAGTCTCTGACTGCCGCCGCCGCTTCCAGGAGCGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CCA 72 bp CCGCACCTGGCTCCATTCCCTGGGCCATTCCTGGTGTaGGGCTCTCAGCTCTCTCCATACTCTGTCCATCAG +
Preference number: 6 (lower is better)
Translates to: PHLAPFPGPFLV*GSQLSPYSVHQ
Trigger: CTGATGGACAGAGTATGGAGAGAGCTGAGAGCCCCACACCAGGAATGGCCCAGGGAATGGAGCCAGGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000483022.5
ENST00000493206.1
ENST00000642691.1
ENST00000645862.1
CDS CCA 72 bp CGGTCTTCCTCTTTGCGGATCCAGCGCATCAGCTTATaGATGGCACTGACGGCTGACGCCTTGGTCCCCAGG +
Preference number: 6 (lower is better)
Translates to: RSSSLRIQRISL*MALTADALVPR
Trigger: CCTGGGGACCAAGGCGTCAGCCGTCAGTGCCATCCATAAGCTGATGCGCTGGATCCGCAAAGAGGAAGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CCA 72 bp GAGGCTGTACACTTGCCCATACCTGGCTCCATTCCCTaGGCCATTCCTGGTGTGGGGCTCTCAGCTCTCTCC +
Preference number: 6 (lower is better)
Translates to: EAVHLPIPGSIP*AIPGVGLSALS
Trigger: GGAGAGAGCTGAGAGCCCCACACCAGGAATGGCCCAGGGAATGGAGCCAGGTATGGGCAAGTGTACAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS GCA 72 bp GCCATCTGCATGGATGGAGCGGATGGCGTTCTTGTCTaGCTCCAGGAAGGACACCAGGGCCACCATAACACC +
Preference number: 6 (lower is better)
Translates to: AICMDGADGVLV*LQEGHQGHHNT
Trigger: GGTGTTATGGTGGCCCTGGTGTCCTTCCTGGAGGCAGACAAGAACGCCATCCGCTCCATCCATGCAGATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000642691.1
ENST00000645862.1
CDS CAA 72 bp CAGGGAGACACAGTCTTCCCATTGCAAACGATAGCGTaGATGGCTGGAGGCCCCCGTCTTCAAGCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: QGDTVFPLQTIA*MAGGPRLQAPP
Trigger: GGGAGGGGCTTGAAGACGGGGGCCTCCAGCCATCAACGCTATCGTTTGCAATGGGAAGACTGTGTCTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493206.1
CDS CAA 90 bp ACTAATGAGGTTGAAGAGCAGGTGCAGGTCGATGGGGTGCAGAAATaGGTCCTTTCGGCGCACGAGTGCCACGAGCTGGTTGCGGGCCAG +
Preference number: 6 (lower is better)
Translates to: TNEVEEQVQVDGVQK*VLSAHECHELVAGQ
Trigger: CTGGCCCGCAACCAGCTCGTGGCACTCGTGCGCCGAAAGGACCAATTTCTGCACCCCATCGACCTGCACCTGCTCTTCAACCTCATTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS TCA 72 bp GGAGGTTCTCGTTGGGGCCCGTGTAGTAAATGGTCTTaGGTGGGCGAGAGGCATTGTGGGCACGACTGTGCA +
Preference number: 6 (lower is better)
Translates to: GGSRWGPCSKWS*VGERHCGHDCA
Trigger: TGCACAGTCGTGCCCACAATGCCTCTCGCCCACTCAAGACCATTTACTACACGGGCCCCAACGAGAACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS TCA 72 bp GATCCAGCGCATCAGCTTATGGATGGCACTGACGGCTaGCGCCTTGGTCCCCAGGGGGCTGTAACACATGTA +
Preference number: 6 (lower is better)
Translates to: DPAHQLMDGTDG*RLGPQGAVTHV
Trigger: TACATGTGTTACAGCCCCCTGGGGACCAAGGCGTCAGCCGTCAGTGCCATCCATAAGCTGATGCGCTGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS TCA 72 bp AATTCCCCCTGGAGACTGCTCTGGTTGGCAGCTGGCTaGGGCTGTACACTTGCCCATACCTGGCTCCATTCC +
Preference number: 6 (lower is better)
Translates to: NSPWRLLWLAAG*GCTLAHTWLHS
Trigger: GGAATGGAGCCAGGTATGGGCAAGTGTACAGCCTCAGCCAGCTGCCAACCAGAGCAGTCTCCAGGGGGAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS TCA 72 bp GGCCCTCCCTCACCTGGTGAAGAGTCCCGAGCTCTTTaGCTTATAGAGGAAGTGACGCAGGTCAGGGATGCC +
Preference number: 6 (lower is better)
Translates to: GPPSPGEESRAL*LIEEVTQVRDA
Trigger: GGCATCCCTGACCTGCGTCACTTCCTCTATAAGTCAAAGAGCTCGGGACTCTTCACCAGGTGAGGGAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486107.5
CDS CCA 72 bp TTGAAGAGCAGGTGCAGGTCGATGGGGTGCAGAAATTaGTCCTTTCGGCGCACGAGTGCCACGAGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: LKSRCRSMGCRN*SFRRTSATSWL
Trigger: CAACCAGCTCGTGGCACTCGTGCGCCGAAAGGACCAATTTCTGCACCCCATCGACCTGCACCTGCTCTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CCA 72 bp CCATACCTGGCTCCATTCCCTGGGCCATTCCTGGTGTaGGGCTCTCAGCTCTCTCCATACTCTGTCCATCAG +
Preference number: 6 (lower is better)
Translates to: PYLAPFPGPFLV*GSQLSPYSVHQ
Trigger: CTGATGGACAGAGTATGGAGAGAGCTGAGAGCCCCACACCAGGAATGGCCCAGGGAATGGAGCCAGGTATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS CAA 72 bp GTTGAAGAGCAGGTGCAGGTCGATGGGGTGCAGAAATaGGTCCTTTCGGCGCACGAGTGCCACGAGCTGGTT +
Preference number: 6 (lower is better)
Translates to: VEEQVQVDGVQK*VLSAHECHELV
Trigger: AACCAGCTCGTGGCACTCGTGCGCCGAAAGGACCAATTTCTGCACCCCATCGACCTGCACCTGCTCTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CAA 72 bp CTTATAGAGGAAGTGACGCAGGTCAGGGATGCCCACTaGGGCAACGCTGTAGTAGGGTGTGCGCAGTGCCTC +
Preference number: 6 (lower is better)
Translates to: LIEEVTQVRDAH*GNAVVGCAQCL
Trigger: GAGGCACTGCGCACACCCTACTACAGCGTTGCCCAAGTGGGCATCCCTGACCTGCGTCACTTCCTCTATAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CAA 90 bp GTCCAGGCCTCGCCCTCGCGAAAGGACGAGGAGGAACTAATGAGGTaGAAGAGCAGGTGCAGGTCGATGGGGTGCAGAAATTGGTCCTTT +
Preference number: 6 (lower is better)
Translates to: VQASPSRKDEEELMR*KSRCRSMGCRNWSF
Trigger: AAAGGACCAATTTCTGCACCCCATCGACCTGCACCTGCTCTTCAACCTCATTAGTTCCTCCTCGTCCTTTCGCGAGGGCGAGGCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 72 bp CTAATGAGGTTGAAGAGCAGGTGCAGGTCGATGGGGTaGAGAAATTGGTCCTTTCGGCGCACGAGTGCCACG +
Preference number: 6 (lower is better)
Translates to: LMRLKSRCRSMG*RNWSFRRTSAT
Trigger: CGTGGCACTCGTGCGCCGAAAGGACCAATTTCTGCACCCCATCGACCTGCACCTGCTCTTCAACCTCATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 72 bp TGTCCTTCTCCCCAACTACAATGGTACCCAGTAAGGTaGCGGAACGCAGCACCTCACCCTGTGTCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: CPSPQLQWYPVR*RNAAPHPVSGA
Trigger: TGCTCCAGACACAGGGTGAGGTGCTGCGTTCCGGCACCTTACTGGGTACCATTGTAGTTGGGGAGAAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS CCA 72 bp GGGTATGCTCATGGGGTGATGGAGAGTCTGGGTCTCTaGTGCCAGAGTAAAACAGGCCCAGCACACTGGTCT +
Preference number: 6 (lower is better)
Translates to: GYAHGVMESLGL*CQSKTGPAHWS
Trigger: AGACCAGTGTGCTGGGCCTGTTTTACTCTGGCACCAGAGACCCAGACTCTCCATCACCCCATGAGCATACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486107.5
CDS CAA 72 bp GTGAGGGGCGTGAGAATGAAGAGGCGGTCTTCCTCTTaGCGGATCCAGCGCATCAGCTTATGGATGGCACTG +
Preference number: 6 (lower is better)
Translates to: VRGVRMKRRSSS*RIQRISLWMAL
Trigger: CAGTGCCATCCATAAGCTGATGCGCTGGATCCGCAAAGAGGAAGACCGCCTCTTCATTCTCACGCCCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 72 bp GCCGGAACGCAGCACCTCACCCTGTGTCTGGAGCACTaGCCATACTCAATGAATCTCTCTCTCTGGGAGAAA +
Preference number: 6 (lower is better)
Translates to: AGTQHLTLCLEH*PYSMNLSLWEK
Trigger: TTTCTCCCAGAGAGAGAGATTCATTGAGTATGGGCAGTGCTCCAGACACAGGGTGAGGTGCTGCGTTCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS GCA 72 bp TATGCTCATGGGGTGATGGAGAGTCTGGGTCTCTGGTaGCAGAGTAAAACAGGCCCAGCACACTGGTCTGCT +
Preference number: 6 (lower is better)
Translates to: YAHGVMESLGLW*QSKTGPAHWSA
Trigger: AGCAGACCAGTGTGCTGGGCCTGTTTTACTCTGGCACCAGAGACCCAGACTCTCCATCACCCCATGAGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486107.5
CDS CCA 72 bp GTTCTCGTTGGGGCCCGTGTAGTAAATGGTCTTGAGTaGGCGAGAGGCATTGTGGGCACGACTGTGCAAGTA +
Preference number: 6 (lower is better)
Translates to: VLVGARVVNGLE*ARGIVGTTVQV
Trigger: TACTTGCACAGTCGTGCCCACAATGCCTCTCGCCCACTCAAGACCATTTACTACACGGGCCCCAACGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS TCA 72 bp CTCAATCTCAGGGCTGGTGAAGAGTCCCGAGCTCTTTaGCTTATAGAGGAAGTGACGCAGGTCAGGGATGCC +
Preference number: 6 (lower is better)
Translates to: LNLRAGEESRAL*LIEEVTQVRDA
Trigger: GGCATCCCTGACCTGCGTCACTTCCTCTATAAGTCAAAGAGCTCGGGACTCTTCACCAGCCCTGAGATTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000642691.1
ENST00000645862.1
CDS TCA 72 bp ACCTCACCCTGTGTCTGGAGCACTGCCCATACTCAATaGATCTCTCTCTCTGGGAGAAAGCTCCCCTACCCT +
Preference number: 6 (lower is better)
Translates to: TSPCVWSTAHTQ*ISLSGRKLPYP
Trigger: AGGGTAGGGGAGCTTTCTCCCAGAGAGAGAGATTCATTGAGTATGGGCAGTGCTCCAGACACAGGGTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS GCA 72 bp TCTTTGACTTATAGAGGAAGTGACGCAGGTCAGGGATaGCCACTTGGGCAACGCTGTAGTAGGGTGTGCGCA +
Preference number: 6 (lower is better)
Translates to: SLTYRGSDAGQG*PLGQRCSRVCA
Trigger: TGCGCACACCCTACTACAGCGTTGCCCAAGTGGGCATCCCTGACCTGCGTCACTTCCTCTATAAGTCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS CCA 72 bp CTGGAGCACTGCCCATACTCAATGAATCTCTCTCTCTaGGAGAAAGCTCCCCTACCCTACTCAGGCCATAGC +
Preference number: 6 (lower is better)
Translates to: LEHCPYSMNLSL*EKAPLPYSGHS
Trigger: GCTATGGCCTGAGTAGGGTAGGGGAGCTTTCTCCCAGAGAGAGAGATTCATTGAGTATGGGCAGTGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS CCA 72 bp CCTTTGAGCTCTCCGAGGCTGGTAGCAAGGCTTATTTaGCCTCTAGGGTCCTTCAATGGCAGGCTGAAGGAT +
Preference number: 6 (lower is better)
Translates to: PLSSPRLVARLI*PLGSFNGRLKD
Trigger: ATCCTTCAGCCTGCCATTGAAGGACCCTAGAGGCCAAATAAGCCTTGCTACCAGCCTCGGAGAGCTCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483022.5
CDS CAA 72 bp TCCTTTGAGCTCTCCGAGGCTGGTAGCAAGGCTTATTaGGCCTCTAGGGTCCTTCAATGGCAGGCTGAAGGA +
Preference number: 6 (lower is better)
Translates to: SFELSEAGSKAY*ASRVLQWQAEG
Trigger: TCCTTCAGCCTGCCATTGAAGGACCCTAGAGGCCAAATAAGCCTTGCTACCAGCCTCGGAGAGCTCAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483022.5
CDS GCA 72 bp AAGGACGAGGAGGAACTAATGAGGTTGAAGAGCAGGTaGAGGTCGATGGGGTGCAGAAATTGGTCCTTTCGG +
Preference number: 6 (lower is better)
Translates to: KDEEELMRLKSR*RSMGCRNWSFR
Trigger: CCGAAAGGACCAATTTCTGCACCCCATCGACCTGCACCTGCTCTTCAACCTCATTAGTTCCTCCTCGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000486107.5
ENST00000642691.1
ENST00000645862.1
CDS GCA 72 bp TCCAGGAAGACTCTATCTTATGTCCTACCCTCCAGGTaGTCCCTTAGGACAGGGCATTGTCTCCCCACCATA +
Preference number: 6 (lower is better)
Translates to: SRKTLSYVLPSR*SLRTGHCLPTI
Trigger: TATGGTGGGGAGACAATGCCCTGTCCTAAGGGAGCACCTGGAGGGTAGGACATAAGATAGAGTCTTCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486107.5
CDS CAA 72 bp CTAGGGTCCTTCAATGGCAGGCTGAAGGATCCTCACTaGTCAGGCAACATACAGTTCACCCAAGAGGGGATC +
Preference number: 6 (lower is better)
Translates to: LGSFNGRLKDPH*SGNIQFTQEGI
Trigger: GATCCCCTCTTGGGTGAACTGTATGTTGCCTGACAAGTGAGGATCCTTCAGCCTGCCATTGAAGGACCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483022.5
CDS CAA 90 bp ATTTGGCCTCTAGGGTCCTTCAATGGCAGGCTGAAGGATCCTCACTaGTCAGGCAACATACAGTTCACCCAAGAGGGGATCCATTCCAGG +
Preference number: 6 (lower is better)
Translates to: IWPLGSFNGRLKDPH*SGNIQFTQEGIHSR
Trigger: CCTGGAATGGATCCCCTCTTGGGTGAACTGTATGTTGCCTGACAAGTGAGGATCCTTCAGCCTGCCATTGAAGGACCCTAGAGGCCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483022.5
CDS TCA 72 bp CCTCTCCGTCCGAGCCAGCTAGCAGTTCATTTCAAGTaGGAGAAAGGGACGTTAGGATTGTTTCTCCCACTG +
Preference number: 6 (lower is better)
Translates to: PLRPSQLAVHFK*EKGTLGLFLPL
Trigger: CAGTGGGAGAAACAATCCTAACGTCCCTTTCTCTCACTTGAAATGAACTGCTAGCTGGCTCGGACGGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417270.1
CDS TCA 72 bp CCAAGACAGAGTGACAGATCTGGAGTAGAGGAAAGGTaGGCTAGGAATCCTGTGGGCCAAAAGGGACAAAGG +
Preference number: 6 (lower is better)
Translates to: PRQSDRSGVEER*ARNPVGQKGQR
Trigger: CCTTTGTCCCTTTTGGCCCACAGGATTCCTAGCTCACCTTTCCTCTACTCCAGATCTGTCACTCTGTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486107.5
CDS CCA 72 bp CCCCCTAAGCTCATAGTGTCTTTGGTGACCCCTCTTTaGAGAGGCCAGGTTGAGTTTAGATGTCCAAGACAG +
Preference number: 6 (lower is better)
Translates to: PPKLIVSLVTPL*RGQVEFRCPRQ
Trigger: CTGTCTTGGACATCTAAACTCAACCTGGCCTCTCCAAAGAGGGGTCACCAAAGACACTATGAGCTTAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486107.5
CDS CCA 72 bp GGTAGCAAGGCTTATTTGGCCTCTAGGGTCCTTCAATaGCAGGCTGAAGGATCCTCACTTGTCAGGCAACAT +
Preference number: 6 (lower is better)
Translates to: GSKAYLASRVLQ*QAEGSSLVRQH
Trigger: ATGTTGCCTGACAAGTGAGGATCCTTCAGCCTGCCATTGAAGGACCCTAGAGGCCAAATAAGCCTTGCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483022.5
CDS GCA 72 bp CTCTCTCCATACTCTGTCCATCAGAAGGAGTCAATGTaGCATCAAGGCATTCGCTGCTTCTCTTCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: LSPYSVHQKESM*HQGIRCFSSSA
Trigger: TGCAGAGGAAGAGAAGCAGCGAATGCCTTGATGGCACATTGACTCCTTCTGATGGACAGAGTATGGAGAGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296473.7
ENST00000417270.1
ENST00000455683.6
ENST00000473451.1
ENST00000483022.5
ENST00000486107.5
ENST00000493206.1
ENST00000642691.1
ENST00000645862.1
CDS GCA 72 bp CGAATTCAGCCCTGTACCAGGCACTGGGGATATAACTaGTCTGCGCTCAAAGTGTTCACAATCTTGTGGAAG +
Preference number: 6 (lower is better)
Translates to: RIQPCTRHWGYN*SALKVFTILWK
Trigger: CTTCCACAAGATTGTGAACACTTTGAGCGCAGAGCAGTTATATCCCCAGTGCCTGGTACAGGGCTGAATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS GCA 72 bp TTTCCAGGCCTTCTGGTTAATAAAGTAGAGAGGGTATaGTCATGGGGTGATGGAGAGTCTGGGTCTCTGGTG +
Preference number: 6 (lower is better)
Translates to: FPGLLVNKVERV*SWGDGESGSLV
Trigger: CACCAGAGACCCAGACTCTCCATCACCCCATGAGCATACCCTCTCTACTTTATTAACCAGAAGGCCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486107.5
CDS CAA 72 bp CTGACCTCCAACCCCAGGCACTCTATATATCCCTTTTaGATTTCTCTTGTGGCACTTGCCAGTTATTGTCCT +
Preference number: 6 (lower is better)
Translates to: LTSNPRHSIYPF*ISLVALASYCP
Trigger: AGGACAATAACTGGCAAGTGCCACAAGAGAAATCAAAAAGGGATATATAGAGTGCCTGGGGTTGGAGGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS TCA 72 bp CTCCTGCCTTATCCCCAGAACCTGACAAATATCCAATaGGTGACTGACAAATGCATGAATAAGTGGAAAGGA +
Preference number: 6 (lower is better)
Translates to: LLPYPQNLTNIQ*VTDKCMNKWKG
Trigger: TCCTTTCCACTTATTCATGCATTTGTCAGTCACTCATTGGATATTTGTCAGGTTCTGGGGATAAGGCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473451.1
CDS CCA 72 bp TATAACTGCTCTGCGCTCAAAGTGTTCACAATCTTGTaGAAGAGAGAGATGGGCAATATATGCATAAAGAGA +
Preference number: 6 (lower is better)
Translates to: YNCSALKVFTIL*KREMGNICIKR
Trigger: TCTCTTTATGCATATATTGCCCATCTCTCTCTTCCACAAGATTGTGAACACTTTGAGCGCAGAGCAGTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473451.1