RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMP11 (Homo sapiens)

Ensembl gene IDs: ENSG00000099953, ENSG00000275365

Ensembl transcript IDs: ENST00000215743.8, ENST00000428253.1, ENST00000434318.1, ENST00000437086.5, ENST00000460352.1, ENST00000465385.5, ENST00000465730.1, ENST00000477567.5, ENST00000480185.1, ENST00000488363.1, ENST00000489582.5, ENST00000492464.1, ENST00000493132.1, ENST00000612388.3, ENST00000625962.1, ENST00000626399.1, ENST00000626587.1, ENST00000627283.1, ENST00000628212.2, ENST00000628372.1, ENST00000628530.2, ENST00000628782.2, ENST00000628805.2, ENST00000629008.1, ENST00000629467.1, ENST00000629514.2

Found 670 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTGCGGGGCCCAGGACTGGCTTTTCACCGTCGTACACCCAGTACTaGGCACCTGCCGGAGAGGGAAGGCTGCAAGGACCTGCCCAGCCA +
Preference number: 1 (lower is better)
Translates to: GAGPRTGFSPSYTQY*APAGEGRLQGPAQP
Trigger: TGGCTGGGCAGGTCCTTGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTGAAAAGCCAGTCCTGGGCCCCGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR GCA 90 bp TCCAGTCAGTGGCCCTGCGGGGCACGGGACTGTCTACACGCCGGGTaGTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGA +
Preference number: 1 (lower is better)
Translates to: SSQWPCGARDCLHAG*WGGNASSPCLGRSR
Trigger: TCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCAGGGCCACTGACTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR TCA 90 bp TCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCAGGTaGCCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTG +
Preference number: 1 (lower is better)
Translates to: SCQSLPAQSETVAGR*PRPAWPSRQLSWWL
Trigger: CAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGGTCACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR CCA 90 bp AGTCAGTGGCCCTGCGGGGCACGGGACTGTCTACACGCCGGGTGCTaGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCT +
Preference number: 1 (lower is better)
Translates to: SQWPCGARDCLHAGC*GGNASSPCLGRSRS
Trigger: AGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCAGGGCCACTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR GCA 90 bp CCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTaGCATGGTGCTACCCTGAGGGACAGGGATGGAGACAGGGCAGCC +
Preference number: 1 (lower is better)
Translates to: PHNRDTARTLQFPQS*HGATLRDRDGDRAA
Trigger: GGCTGCCCTGTCTCCATCCCTGTCCCTCAGGGTAGCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR CCA 90 bp TTCGTGGCCTGGCAGGGGTCAGCACCCCTGAGGGCATCCAAGCCATaGTCAGAGGAAAGTGTTGGCAGGCTCGGCACAGCCAAAGAAGTC +
Preference number: 1 (lower is better)
Translates to: FVAWQGSAPLRASKP*SEESVGRLGTAKEV
Trigger: GACTTCTTTGGCTGTGCCGAGCCTGCCAACACTTTCCTCTGACCATGGCTTGGATGCCCTCAGGGGTGCTGACCCCTGCCAGGCCACGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
3UTR GCA 90 bp ACATCGCTCCATACCTTTAGGGCCTCTGCCATCGTCTGCCGCACCTaGTCCTGCACCAACTGCCATGGGAACCGAAGGATCCCACGGACA +
Preference number: 1 (lower is better)
Translates to: TSLHTFRASAIVCRT*SCTNCHGNRRIPRT
Trigger: TGTCCGTGGGATCCTTCGGTTCCCATGGCAGTTGGTGCAGGAGCAGGTGCGGCAGACGATGGCAGAGGCCCTAAAGGTATGGAGCGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
3UTR CCA 90 bp TGGAGGATAGCAGTGCTGCGAAAAGGGCTTCAGGAGGATCCGGCCTaGGACAGGATTGAGGTATGTTGCAGCCTCCAGGGCCTGGGGTCT +
Preference number: 1 (lower is better)
Translates to: WRIAVLRKGLQEDPA*DRIEVCCSLQGLGS
Trigger: AGACCCCAGGCCCTGGAGGCTGCAACATACCTCAATCCTGTCCCAGGCCGGATCCTCCTGAAGCCCTTTTCGCAGCACTGCTATCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR GCA 90 bp GACTGTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTaGCTCGGAAGAAGTAGATCTTGTTCTTCTCGGGACCCCAGACCA +
Preference number: 1 (lower is better)
Translates to: DCLHAGCWGGNASSP*LGRSRSCSSRDPRP
Trigger: TGGTCTGGGGTCCCGAGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR GCA 90 bp AGTCAGTGGCCCTGCGGGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGACAGCCACCACTGCCATaGCCCGCCACTGTGGACCTG +
Preference number: 2 (lower is better)
Translates to: SQWPCGARDCLHAGCWGGQPPLP*PATVDL
Trigger: CAGGTCCACAGTGGCGGGGCATGGCAGTGGTGGCTG...TCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCAGGGCCACTGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR TCA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCAACAGTCGCTGGCAGGTaGCCACGACCTGCGTGGCCC +
Preference number: 2 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPTVAGR*PRPAWP
Trigger: GGGCCACGCAGGTCGTGGTCACCTGCCAGCGACTGT...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp AGTCAGTGGCCCTGCGGGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGACATGCCCCGCCACTGTaGACCTGCTTGACCCCTACC +
Preference number: 2 (lower is better)
Translates to: SQWPCGARDCLHAGCWGGHAPPL*TCLTPT
Trigger: GGTAGGGGTCAAGCAGGTCCACAGTGGCGGGGCATG...TCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCAGGGCCACTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR GCA 90 bp CATCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCCACTCCCTGGGCCCCTaGAGGCTGGACTGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: HPGRQRRSQRAPLSSQWPHSLGP*RLDCPG
Trigger: TCCAGGGCAGTCCAGCCTGCAGGGGCCCAGGGAGTG...GGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR GCA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCACAGGGCAGCCAGGTTTaGCAGGACCTGCATAGCGGG +
Preference number: 2 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPQGSQV*QDLHSG
Trigger: CCCGCTATGCAGGTCCTGGCAAACCTGGCTGCCCTG...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp GAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGGCCAGTCCTGCCATGGTaGTACCCTGAGGGACAGGGA +
Preference number: 2 (lower is better)
Translates to: EGSVDLRGHPSPVSGPAGPVLPW*YPEGQG
Trigger: TCCCTGTCCCTCAGGGTAGCACCATGGCAGGACTGG...CCCCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
3UTR-3UTR GCA 90 bp TCTTCTCGGGACCCCAGACCAAGGCAGCATGGACCGGGAACCTCACCAGGCCCACCCTGCAGGCTGGACTaGCCTGGAACCCACGCAGGT +
Preference number: 2 (lower is better)
Translates to: SSRDPRPRQHGPGTSPGPPCRLD*PGTHAG
Trigger: ACCTGCGTGGGTTCCAGGGCAGTCCAGCCTGCAGGG...TGGGCCTGGTGAGGTTCCCGGTCCATGCTGCCTTGGTCTGGGGTCCCGAGAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR GCA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCACAGTTCCCCCAGTCCTaGCATGGTGCTACCCTGAGG +
Preference number: 2 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPQFPQS*HGATLR
Trigger: CCTCAGGGTAGCACCATGGCAGGACTGGGGGAACTG...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp GCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTCACTCCCTGGGCCCCTaGAGGCTGGACTGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: AGCWGGNASSPCLGRSRSHSLGP*RLDCPG
Trigger: TCCAGGGCAGTCCAGCCTGCAGGGGCCCAGGGAGTG...AGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR GCA 90 bp GGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTCCGCCACTGTGGACCTaGTTGACCCCTACCACAGAC +
Preference number: 2 (lower is better)
Translates to: GHGTVYTPGAGVETPVVPPPLWT*LTPTTD
Trigger: GTCTGTGGTAGGGGTCAAGCAGGTCCACAGTGGCGG...AGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR GCA 90 bp CACCGTCGTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCAAGGACCAGCCACCACTGCCATaGCCCGCCACTGTGGACCTG +
Preference number: 2 (lower is better)
Translates to: HRRTPSTEHLPEREGCKDQPPLP*PATVDL
Trigger: CAGGTCCACAGTGGCGGGGCATGGCAGTGGTGGCTG...GTCCTTGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR CCA 90 bp CCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCATCCCCCGCTCAGTCCCATGCCTaGTGCCCACAGCCACAAAGA +
Preference number: 2 (lower is better)
Translates to: PAWPSRQLSWWLYPTPSPAQSHA*CPQPQR
Trigger: TCTTTGTGGCTGTGGGCACCAGGCATGGGACTGAGC...GGGGGATGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp GGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTCAGACCAAGGCAGCATaGACCGGGAACCTCACCAGG +
Preference number: 2 (lower is better)
Translates to: GHGTVYTPGAGVETPVVPQTKAA*TGNLTR
Trigger: CCTGGTGAGGTTCCCGGTCCATGCTGCCTTGGTCTG...AGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR TCA 90 bp GGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGACAGTCGCTGGCAGGTaGCCACGACCTGCGTGGCCC +
Preference number: 2 (lower is better)
Translates to: GPRLPFLLSHAKASLPSLTVAGR*PRPAWP
Trigger: GGGCCACGCAGGTCGTGGTCACCTGCCAGCGACTGT...CAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR TCA 90 bp GCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCAGGAGGATCCGGCCTGGGAACAGTCGCTGGCAGGTaGCCACGACCTGCGTGGCCC +
Preference number: 2 (lower is better)
Translates to: ALEDSSAAKRASGGSGLGTVAGR*PRPAWP
Trigger: GGGCCACGCAGGTCGTGGTCACCTGCCAGCGACTGT...TCCCAGGCCGGATCCTCCTGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR TCA 90 bp CTGCCATGCCCCGCCACTGTGGACCTGCTTGACCCCTACCACAGACTCTCCCAGGTGACAAATGCCTACTaGCCACTCCCTGGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: LPCPATVDLLDPYHRLSQVTNAY*PLPGPL
Trigger: CAGGGGCCCAGGGAGTGGTCAGTAGGCATTTGTCAC...CTGGGAGAGTCTGTGGTAGGGGTCAAGCAGGTCCACAGTGGCGGGGCATGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR CCA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCAGCTCAGTCCCATGCCTaGTGCCCACAGCCACAAAGA +
Preference number: 2 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPAQSHA*CPQPQR
Trigger: TCTTTGTGGCTGTGGGCACCAGGCATGGGACTGAGC...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp GTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAACAGGCTGGACTGCCCTaGAACCCACGCAGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: VYTPGAGVETPVVPASEEQAGLP*NPRRFP
Trigger: GGGAAACCTGCGTGGGTTCCAGGGCAGTCCAGCCTG...TTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR TCA 90 bp AGGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCCTCCCTGCCCAGTCTaGGACAGTCGCTGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: RYVAASRAWGLLHEEYPSPPCPV*DSRWQV
Trigger: CACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGG...GGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR TCA 90 bp GCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTCCCTGCCCAGTCTaGGACAGTCGCTGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: ARRQTDAGTYQDLTSGSGPPCPV*DSRWQV
Trigger: CACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGG...GCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR TCA 90 bp CACCGTCGTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCAAGGACGTGACAAATGCCTACTaGCCACTCCCTGGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: HRRTPSTEHLPEREGCKDVTNAY*PLPGPL
Trigger: CAGGGGCCCAGGGAGTGGTCAGTAGGCATTTGTCAC...GTCCTTGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR TCA 90 bp AGTCAGTGGCCCTGCGGGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGAACTGGCATTTGGCTGTaGCAAATGCCTACTGACCAC +
Preference number: 2 (lower is better)
Translates to: SQWPCGARDCLHAGCWGGTGIWL*QMPTDH
Trigger: GTGGTCAGTAGGCATTTGTCACAGCCAAATGCCAGT...TCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCAGGGCCACTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR GCA 90 bp ATGTCAGCACGGCCCTCGTGCACCTCAGTAAAGGTGAGTGGCGTCACATCGCTCGCCTCTGCCATCGTCTaGCGCACCTGCTCCTGCACC +
Preference number: 2 (lower is better)
Translates to: MSARPSCTSVKVSGVTSLASAIV*RTCSCT
Trigger: GGTGCAGGAGCAGGTGCGGCAGACGATGGCAGAGGC...GAGCGATGTGACGCCACTCACCTTTACTGAGGTGCACGAGGGCCGTGCTGACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
3UTR-3UTR CCA 90 bp AGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCAGGTGACCACCCCCCTGAGGAGACATaGGCTCAGTCCCATGCCTGG +
Preference number: 2 (lower is better)
Translates to: SHAKASLPSLRQSLAGDHPPEET*AQSHAW
Trigger: CCAGGCATGGGACTGAGCCCATGTCTCCTCAGGGGG...GTGGTCACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp CAGCCAAAGAAGTCAGGACCCACGAGACGGGGGAAGCCTTCCAGAGCCTTCACCCCCCCTGAGGAGACATaGGCTCAGTCCCATGCCTGG +
Preference number: 2 (lower is better)
Translates to: QPKKSGPTRRGKPSRAFTPPEET*AQSHAW
Trigger: CCAGGCATGGGACTGAGCCCATGTCTCCTCAGGGGG...GGTGAAGGCTCTGGAAGGCTTCCCCCGTCTCGTGGGTCCTGACTTCTTTGGCTG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
3UTR-3UTR CCA 90 bp TCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGCAGTTGTCATGGTaGTTGTACCCCACCCCATCC +
Preference number: 2 (lower is better)
Translates to: SWKAASISEGTPLQSVALRQLSW*LYPTPS
Trigger: GGATGGGGTGGGGTACAACCACCATGACAACTGCCG...CAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
3UTR-3UTR CCA 90 bp CATCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTCCCGGCAGTTGTCATaGTGGTTGTACCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: HPGRQRRSQRAPLSSQWPSRQLS*WLYPTP
Trigger: TGGGGTGGGGTACAACCACCATGACAACTGCCGGGA...GGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
3UTR-3UTR TCA 90 bp CTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCCCCACCCCATCCCCCTaGGGAGACATGGGCTCAGTC +
Preference number: 2 (lower is better)
Translates to: LPLKSCQSLPAQSETVAGPTPSP*GDMGSV
Trigger: GACTGAGCCCATGTCTCCTCAGGGGGATGGGGTGGG...GCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR TCA 90 bp GTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCAAGGACCTGCCCACACTGTGGACCTGCTTaGCCCCTACCACAGACTCTC +
Preference number: 2 (lower is better)
Translates to: VHPVLSTCRRGKAARTCPHCGPA*PLPQTL
Trigger: GAGAGTCTGTGGTAGGGGTCAAGCAGGTCCACAGTG...TGGGCAGGTCCTTGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR GCA 90 bp ATCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTAGGTTTGCCAGGACCTaGATAGCGGGCCCAAGACTG +
Preference number: 2 (lower is better)
Translates to: ILEGSVDLRGHPSPVSGPRFART*IAGPRL
Trigger: CAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAACCT...AGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
3UTR-3UTR GCA 90 bp AGGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCAGGGCAGCCAGGTTTaGCAGGACCTGCATAGCGGG +
Preference number: 2 (lower is better)
Translates to: RYVAASRAWGLLHEEYPSQGSQV*QDLHSG
Trigger: CCCGCTATGCAGGTCCTGGCAAACCTGGCTGCCCTG...GGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp GCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCAGGAGGATCCGGCCTGGGACAGGGCAGCCAGGTTTaGCAGGACCTGCATAGCGGG +
Preference number: 2 (lower is better)
Translates to: ALEDSSAAKRASGGSGLGQGSQV*QDLHSG
Trigger: CCCGCTATGCAGGTCCTGGCAAACCTGGCTGCCCTG...TCCCAGGCCGGATCCTCCTGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp ACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCTACCCCAGGGCAGCCAGGTTTaGCAGGACCTGCATAGCGGG +
Preference number: 2 (lower is better)
Translates to: TGIQQGHSSSPSPAMVLPQGSQV*QDLHSG
Trigger: CCCGCTATGCAGGTCCTGGCAAACCTGGCTGCCCTG...GGGTAGCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCCTCAGGAAGTGGCCCTaGCCTACAGCCCAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPLRKWP*PTAQLL
Trigger: GAGCAACTGGGCTGTAGGGCAGGGCCACTTCCTGAG...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp GCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTCCGCCACTGTGGACCTaGTTGACCCCTACCACAGAC +
Preference number: 2 (lower is better)
Translates to: AGCWGGNASSPCLGRSRSPPLWT*LTPTTD
Trigger: GTCTGTGGTAGGGGTCAAGCAGGTCCACAGTGGCGG...AGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR CAA 90 bp CAGTGCTGCGAAAAGGGCTTCAGGAGGATCCGGCCTGGGACAGGATaGAGGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAA +
Preference number: 2 (lower is better)
Translates to: QCCEKGFRRIRPGTG*RYVAASRAWGLLHE
Trigger: TTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACCTCAATCCTGTCCCAGGCCGGATCCTCCTGAAGCCCTTTTCGCAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR TCA 90 bp AGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGCATGGGTCTCTAGCCTaGTATTCGTGGCCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: SGPKTALPLKSCQSLPAQHGSLA*YSWPGR
Trigger: CCTGCCAGGCCACGAATATCAGGCTAGAGACCCATG...CTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp GCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCAGTCCTGCCATGGTaGTACCCTGAGGGACAGGGA +
Preference number: 2 (lower is better)
Translates to: ARRQTDAGTYQDLTSGSGPVLPW*YPEGQG
Trigger: TCCCTGTCCCTCAGGGTAGCACCATGGCAGGACTGG...GCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp AAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTGCCAGTTCCCCCAGTCCTaGCATGGTGCTACCCTGAGG +
Preference number: 2 (lower is better)
Translates to: KADRCRHLPRPDLRKWPCQFPQS*HGATLR
Trigger: CCTCAGGGTAGCACCATGGCAGGACTGGGGGAACTG...GCAGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp AAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTGCGCACCCTTGCTTCAGTaGCAGCCCCTGGAAGGAACC +
Preference number: 2 (lower is better)
Translates to: KADRCRHLPRPDLRKWPCAPLLQ*QPLEGT
Trigger: GGTTCCTTCCAGGGGCTGGCACTGAAGCAAGGGTGC...GCAGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp AGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTGCCCTACAGCCCAGTTaGTCAGCCAGGGCTGAAGGC +
Preference number: 2 (lower is better)
Translates to: RRQTDAGTYQDLTSGSGPALQPS*SARAEG
Trigger: GCCTTCAGCCCTGGCTGAGCAACTGGGCTGTAGGGC...AGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp AACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTCGGGACCCCCCCTGCAGGCTGGACTaGCCTGGAACCCACGCAGGT +
Preference number: 2 (lower is better)
Translates to: NASSPCLGRSRSCSSRDPPCRLD*PGTHAG
Trigger: ACCTGCGTGGGTTCCAGGGCAGTCCAGCCTGCAGGG...GGGGTCCCGAGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR CCA 90 bp AGGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCTGATATTCGTGGCCTaGCAGGGGTCAGCACCCCTG +
Preference number: 2 (lower is better)
Translates to: RYVAASRAWGLLHEEYPSLIFVA*QGSAPL
Trigger: CAGGGGTGCTGACCCCTGCCAGGCCACGAATATCAG...GGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp AGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCAGGTGACCACGCTCAGTCCCATGCCTaGTGCCCACAGCCACAAAGA +
Preference number: 2 (lower is better)
Translates to: SHAKASLPSLRQSLAGDHAQSHA*CPQPQR
Trigger: TCTTTGTGGCTGTGGGCACCAGGCATGGGACTGAGC...GTGGTCACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp CCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTCCCCCTGAGGAGACATaGGCTCAGTCCCATGCCTGG +
Preference number: 2 (lower is better)
Translates to: PHNRDTARTLQFPQSCHGPPEET*AQSHAW
Trigger: CCAGGCATGGGACTGAGCCCATGTCTCCTCAGGGGG...ACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCTCCCGGCAGTTGTCATaGTGGTTGTACCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPSRQLS*WLYPTP
Trigger: TGGGGTGGGGTACAACCACCATGACAACTGCCGGGA...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp AGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCCCGGCAGTTGTCATaGTGGTTGTACCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: SGPKTALPLKSCQSLPAQSRQLS*WLYPTP
Trigger: TGGGGTGGGGTACAACCACCATGACAACTGCCGGGA...CTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp TCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGAGGGCATCCAAGCCATaGTCAGAGGAAAGTGTTGGC +
Preference number: 2 (lower is better)
Translates to: SWKAASISEGTPLQSVALRASKP*SEESVG
Trigger: GCCAACACTTTCCTCTGACCATGGCTTGGATGCCCT...CAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
3UTR-3UTR TCA 90 bp GGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGCATGGGTCTCTAGCCTaGTATTCGTGGCCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: GPRLPFLLSHAKASLPSLHGSLA*YSWPGR
Trigger: CCTGCCAGGCCACGAATATCAGGCTAGAGACCCATG...CAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR TCA 90 bp AGCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGGCCATGGTGCTACCCTaGGGGACAGGGATGGAGACA +
Preference number: 2 (lower is better)
Translates to: SQKADRCRHLPRPDLRKWAMVLP*GTGMET
Trigger: TGTCTCCATCCCTGTCCCTCAGGGTAGCACCATGGC...CCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR TCA 90 bp TCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGACTGGCATTTGGCTGTaGCAAATGCCTACTGACCAC +
Preference number: 2 (lower is better)
Translates to: SWKAASISEGTPLQSVALTGIWL*QMPTDH
Trigger: GTGGTCAGTAGGCATTTGTCACAGCCAAATGCCAGT...CAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR TCA 90 bp GGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGATAAGCTGGGGCAGTaGATGCTCTGTAAACTAGTG +
Preference number: 2 (lower is better)
Translates to: GHGTVYTPGAGVETPVVPDKLGQ*MLCKLV
Trigger: CACTAGTTTACAGAGCATTCACTGCCCCAGCTTATC...AGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR TCA 90 bp GGGACTGTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGATAAGCTGGGGCAGTaGATGCTCTGTAAACTAGTG +
Preference number: 2 (lower is better)
Translates to: GTVYTPGAGVETPVVPASDKLGQ*MLCKLV
Trigger: CACTAGTTTACAGAGCATTCACTGCCCCAGCTTATC...CGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR GCA 90 bp AGCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCAGTCCTGCCATGGTaGTACCCTGAGGGACAGGGA +
Preference number: 2 (lower is better)
Translates to: SQKADRCRHLPRPDLRKWPVLPW*YPEGQG
Trigger: TCCCTGTCCCTCAGGGTAGCACCATGGCAGGACTGG...CCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp CATCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTTTGGCTGTGACAAATaGCTACTGACCACTCCCTGG +
Preference number: 2 (lower is better)
Translates to: HPGRQRRSQRAPLSSQWPFGCDK*LLTTPW
Trigger: CCAGGGAGTGGTCAGTAGGCATTTGTCACAGCCAAA...GGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR CCA 90 bp GTTTGCCAGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCTGATATTCGTGGCCTaGCAGGGGTCAGCACCCCTG +
Preference number: 2 (lower is better)
Translates to: VCQDLHSGPKTALPLKSCLIFVA*QGSAPL
Trigger: CAGGGGTGCTGACCCCTGCCAGGCCACGAATATCAG...GCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp TTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACCCCCCTGAGGAGACATaGGCTCAGTCCCATGCCTGG +
Preference number: 2 (lower is better)
Translates to: LLQCQPLEGTSQQGYSKDPPEET*AQSHAW
Trigger: CCAGGCATGGGACTGAGCCCATGTCTCCTCAGGGGG...GTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp ACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCTACCCCGGCAGTTGTCATGGTaGTTGTACCCCACCCCATCC +
Preference number: 2 (lower is better)
Translates to: TGIQQGHSSSPSPAMVLPRQLSW*LYPTPS
Trigger: GGATGGGGTGGGGTACAACCACCATGACAACTGCCG...GGGTAGCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCTTCAGTGCCAGCCCCTaGAAGGAACCTCACAACAGG +
Preference number: 2 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPFSASP*KEPHNR
Trigger: CCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAA...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR TCA 90 bp AGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTCATGGGTCTCTAGCCTaGTATTCGTGGCCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: RRQTDAGTYQDLTSGSGPHGSLA*YSWPGR
Trigger: CCTGCCAGGCCACGAATATCAGGCTAGAGACCCATG...AGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR TCA 90 bp CAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCACATGGGTCTCTAGCCTaGTATTCGTGGCCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: QCQPLEGTSQQGYSKDTPHGSLA*YSWPGR
Trigger: CCTGCCAGGCCACGAATATCAGGCTAGAGACCCATG...TGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR TCA 90 bp GGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGACCTCCCTGCCCAGTCTaGGACAGTCGCTGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: GLDSGEQISRIVSQKADRPPCPV*DSRWQV
Trigger: CACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGG...TCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR TCA 90 bp TTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACGCCATGGTGCTACCCTaGGGGACAGGGATGGAGACA +
Preference number: 2 (lower is better)
Translates to: LLQCQPLEGTSQQGYSKDAMVLP*GTGMET
Trigger: TGTCTCCATCCCTGTCCCTCAGGGTAGCACCATGGC...GTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp TTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACCTGATATTCGTGGCCTaGCAGGGGTCAGCACCCCTG +
Preference number: 2 (lower is better)
Translates to: LLQCQPLEGTSQQGYSKDLIFVA*QGSAPL
Trigger: CAGGGGTGCTGACCCCTGCCAGGCCACGAATATCAG...GTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp AGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCGGCAGTTGTCATaGTGGTTGTACCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: RTCIAGPRLPFLLSHAKASRQLS*WLYPTP
Trigger: TGGGGTGGGGTACAACCACCATGACAACTGCCGGGA...GGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp GGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTCCAGGCTGGACTGCCCTaGAACCCACGCAGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: GVETPVVPASEEVDLVLLQAGLP*NPRRFP
Trigger: GGGAAACCTGCGTGGGTTCCAGGGCAGTCCAGCCTG...GAGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR CCA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCCCACAGCCACAAAGATaGCCATGGGTCTCTAGCCTG +
Preference number: 2 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCPQPQR*PWVSSL
Trigger: CAGGCTAGAGACCCATGGCCATCTTTGTGGCTGTGG...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp GTAAAGGTGAGTGGCGTCACATCGCTCCATACCTTTAGGGCCTCTGCCATCGTCCCACGGACACACAGGTaGCATCCTAGTGTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: VKVSGVTSLHTFRASAIVPRTHR*HPSVLL
Trigger: GAGCAGGACACTAGGATGCCACCTGTGTGTCCGTGG...GACGATGGCAGAGGCCCTAAAGGTATGGAGCGATGTGACGCCACTCACCTTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
3UTR-3UTR GCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAGGGCCCCAGCACCCTTaGTTCAGTGCCAGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: PPHLTVNFLAWILENRFPGPQHP*FSASPW
Trigger: CCAGGGGCTGGCACTGAAGCAAGGGTGCTGGGGCCC...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp TGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGCTCAGGAAGTGGCCCTaGCCTACAGCCCAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: WPGFWRTDFQDCQPEGRQLRKWP*PTAQLL
Trigger: GAGCAACTGGGCTGTAGGGCAGGGCCACTTCCTGAG...CTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp GGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGACTGATATTCGTGGCCTaGCAGGGGTCAGCACCCCTG +
Preference number: 2 (lower is better)
Translates to: GLDSGEQISRIVSQKADRLIFVA*QGSAPL
Trigger: CAGGGGTGCTGACCCCTGCCAGGCCACGAATATCAG...TCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp TCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGTTTTGGCCTGGATTCTaGAGAACAGATTTCCAGGAT +
Preference number: 2 (lower is better)
Translates to: SWKAASISEGTPLQSVALFWPGF*RTDFQD
Trigger: ATCCTGGAAATCTGTTCTCCAGAATCCAGGCCAAAA...CAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
3UTR-3UTR CCA 90 bp CCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTAGGGCATCCAAGCCATaGTCAGAGGAAAGTGTTGGC +
Preference number: 2 (lower is better)
Translates to: PHNRDTARTLQFPQSCHGRASKP*SEESVG
Trigger: GCCAACACTTTCCTCTGACCATGGCTTGGATGCCCT...ACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
3UTR-3UTR GCA 90 bp TTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGGGCCCCAGCACCCTTaGTTCAGTGCCAGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: LTVNFLAWILENRFPGLSGPQHP*FSASPW
Trigger: CCAGGGGCTGGCACTGAAGCAAGGGTGCTGGGGCCC...TGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp GTTTGCCAGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCCACAAAGATGGCCATaGGTCTCTAGCCTGATATTC +
Preference number: 2 (lower is better)
Translates to: VCQDLHSGPKTALPLKSCPQRWP*VSSLIF
Trigger: GAATATCAGGCTAGAGACCCATGGCCATCTTTGTGG...GCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp GCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGATCGGCAGTTGTCATGGTaGTTGTACCCCACCCCATCC +
Preference number: 2 (lower is better)
Translates to: AWILENRFPGLSARRQTDRQLSW*LYPTPS
Trigger: GGATGGGGTGGGGTACAACCACCATGACAACTGCCG...ATCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCTTTTGGCCTGGATTCTaGAGAACAGATTTCCAGGAT +
Preference number: 2 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPFWPGF*RTDFQD
Trigger: ATCCTGGAAATCTGTTCTCCAGAATCCAGGCCAAAA...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp GCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGATCCACAGCCACAAAGATaGCCATGGGTCTCTAGCCTG +
Preference number: 2 (lower is better)
Translates to: AWILENRFPGLSARRQTDPQPQR*PWVSSL
Trigger: CAGGCTAGAGACCCATGGCCATCTTTGTGGCTGTGG...ATCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp GCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGATCTTCCTCTTAAGTCATaGCAAAGCCTCCCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: AWILENRFPGLSARRQTDLPLKS*QSLPAQ
Trigger: CTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAG...ATCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp CTGTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTAGGATTGAGGTATGTTaGAGCCTCCAGGGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: LYTHLQWLWRIAVLRKGLRIEVC*SLQGLG
Trigger: CCCCAGGCCCTGGAGGCTGCAACATACCTCAATCCT...AAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp TTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCACTCAGGAAGTGGCCCTaGCCTACAGCCCAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: LTVNFLAWILENRFPGLSLRKWP*PTAQLL
Trigger: GAGCAACTGGGCTGTAGGGCAGGGCCACTTCCTGAG...TGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp CTCAGTTTCCTCATCAGTAAAACATGCAGGCCAATAATGCCTGCTCAGCACCCCTTTGGCTGTGACAAATaGCTACTGACCACTCCCTGG +
Preference number: 2 (lower is better)
Translates to: LSFLISKTCRPIMPAQHPFGCDK*LLTTPW
Trigger: CCAGGGAGTGGTCAGTAGGCATTTGTCACAGCCAAA...GGGGTGCTGAGCAGGCATTATTGGCCTGCATGTTTTACTGATGAGGAAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR CCA 90 bp CTGTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCCACAGCCACAAAGATaGCCATGGGTCTCTAGCCTG +
Preference number: 2 (lower is better)
Translates to: LYTHLQWLWRIAVLRKGLPQPQR*PWVSSL
Trigger: CAGGCTAGAGACCCATGGCCATCTTTGTGGCTGTGG...AAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp AGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTGTGAACTTTTTGGCCTaGATTCTGGAGAACAGATTT +
Preference number: 2 (lower is better)
Translates to: RRQTDAGTYQDLTSGSGPVNFLA*ILENRF
Trigger: AAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCAC...AGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CCA 90 bp CTGTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCAGGAGGATCCGGCCTaGGACAGGATTGAGGTATGT +
Preference number: 2 (lower is better)
Translates to: LYTHLQWLWRIAVLRKGLQEDPA*DRIEVC
Trigger: ACATACCTCAATCCTGTCCCAGGCCGGATCCTCCTG...AAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp GTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCACTTCCTCTTAAGTCATaGCAAAGCCTCCCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: VHTFTMALEDSSAAKRASLPLKS*QSLPAQ
Trigger: CTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAG...TGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCACTTCCTCTTAAGTCATaGCAAAGCCTCCCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: PPHLTVNFLAWILENRFPLPLKS*QSLPAQ
Trigger: CTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAG...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp TTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAAGGTTTGCCAGGACCTaGATAGCGGGCCCAAGACTG +
Preference number: 2 (lower is better)
Translates to: LTVNFLAWILENRFPGLSRFART*IAGPRL
Trigger: CAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAACCT...TGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR GCA 90 bp GTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTCGGGACCCCAGACCAACTCATCAGTAAAACATaGAGGCCAATAATGCCTGCT +
Preference number: 2 (lower is better)
Translates to: VVPASEEVDLVLLGTPDQLISKT*RPIMPA
Trigger: AGCAGGCATTATTGGCCTGCATGTTTTACTGATGAG...TTGGTCTGGGGTCCCGAGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR CAA 90 bp AGAAGAAGAAGGTTTATACACACTGTACACACATTTACAATGGCTTaGGAGGATAGCAGTGCTGCGAAAAGGGCTTCAGGAGGATCCGGC +
Preference number: 2 (lower is better)
Translates to: RRRRFIHTVHTFTMA*EDSSAAKRASGGSG
Trigger: GCCGGATCCTCCTGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTACAGTGTGTATAAACCTTCTTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR GCA 72 bp TGGCCCTGCGGGGCACGGGACTGTCTACACGCCGGGTaGTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGA +
Preference number: 3 (lower is better)
Translates to: WPCGARDCLHAG*WGGNASSPCLG
Trigger: TCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCAGGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR CCA 72 bp CAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTaGCCCTGCGGGGCACGGGACTGTCTACACGCCGGG +
Preference number: 3 (lower is better)
Translates to: QRRSQRAPLSSQ*PCGARDCLHAG
Trigger: CCCGGCGTGTAGACAGTCCCGTGCCCCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR CCA 72 bp CCCTGCGGGGCACGGGACTGTCTACACGCCGGGTGCTaGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGA +
Preference number: 3 (lower is better)
Translates to: PCGARDCLHAGC*GGNASSPCLGR
Trigger: TCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR TCA 72 bp AGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCAGGTaGCCACGACCTGCGTGGCCCTCCCGGCAGTTGTCA +
Preference number: 3 (lower is better)
Translates to: SLPAQSETVAGR*PRPAWPSRQLS
Trigger: TGACAACTGCCGGGAGGGCCACGCAGGTCGTGGTCACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR GCA 72 bp GGAAGGCTGCAAGGACCTGCCCAGCCACCACTGCCATaGCCCGCCACTGTGGACCTGCTTGACCCCTACCAC +
Preference number: 3 (lower is better)
Translates to: GRLQGPAQPPLP*PATVDLLDPYH
Trigger: GTGGTAGGGGTCAAGCAGGTCCACAGTGGCGGGGCATGGCAGTGGTGGCTGGGCAGGTCCTTGCAGCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR CAA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCATGGCCCTCCCGGCAGTaGTCATGGTGGTTGTACCCC +
Preference number: 3 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPWPSRQ*SWWLYP
Trigger: GGGGTACAACCACCATGACAACTGCCGGGAGGGCCA...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR TCA 72 bp GCCTGGGCGGCTGCTCCTTCCACTGGCATTTGGCTGTaGCAAATGCCTACTGACCACTCCCTGGGCCCCTGC +
Preference number: 3 (lower is better)
Translates to: AWAAAPSTGIWL*QMPTDHSLGPC
Trigger: GCAGGGGCCCAGGGAGTGGTCAGTAGGCATTTGTCACAGCCAAATGCCAGTGGAAGGAGCAGCCGCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR TCA 72 bp GCCACCACTGCCATGCCCCGCCACTGTGGACCTGCTTaGCCCCTACCACAGACTCTCCCAGCCTCAGTTTCC +
Preference number: 3 (lower is better)
Translates to: ATTAMPRHCGPA*PLPQTLPASVS
Trigger: GGAAACTGAGGCTGGGAGAGTCTGTGGTAGGGGTCAAGCAGGTCCACAGTGGCGGGGCATGGCAGTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR CAA 90 bp GTGACCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCAGTTGTCATGGTGGTaGTACCCCACCCCATCCCCC +
Preference number: 3 (lower is better)
Translates to: VTTTCVALPAVVMVVVPHQLSWW*YPTPSP
Trigger: GGGGGATGGGGTGGGGTACAACCACCATGACAACTG...GTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGGTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR CCA 72 bp ATCTTGTTCTTCTCGGGACCCCAGACCAAGGCAGCATaGACCGGGAACCTCACCAGGCCCAGCTCGGTGAGG +
Preference number: 3 (lower is better)
Translates to: ILFFSGPQTKAA*TGNLTRPSSVR
Trigger: CCTCACCGAGCTGGGCCTGGTGAGGTTCCCGGTCCATGCTGCCTTGGTCTGGGGTCCCGAGAAGAACAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR CAA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCCAGTTGTCATGGTGGTaGTACCCCACCCCATCCCCC +
Preference number: 3 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPQLSWW*YPTPSP
Trigger: GGGGGATGGGGTGGGGTACAACCACCATGACAACTG...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR TCA 72 bp CCCAGGACTGGCTTTTCACCGTCGTACACCCAGTACTaGGCACCTGCCGGAGAGGGAAGGCTGCAAGGACCT +
Preference number: 3 (lower is better)
Translates to: PRTGFSPSYTQY*APAGEGRLQGP
Trigger: AGGTCCTTGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTGAAAAGCCAGTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR CCA 72 bp TCCCATGCCTGGTGCCCACAGCCACAAAGATGGCCATaGGTCTCTAGCCTGATATTCGTGGCCTGGCAGGGG +
Preference number: 3 (lower is better)
Translates to: SHAWCPQPQRWP*VSSLIFVAWQG
Trigger: CCCCTGCCAGGCCACGAATATCAGGCTAGAGACCCATGGCCATCTTTGTGGCTGTGGGCACCAGGCATGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CAA 90 bp GGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGCAGTTGTCATGGTGGTaGTACCCCACCCCATCCCCC +
Preference number: 3 (lower is better)
Translates to: GPRLPFLLSHAKASLPSLQLSWW*YPTPSP
Trigger: GGGGGATGGGGTGGGGTACAACCACCATGACAACTG...CAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR GCA 72 bp AGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTaGCATGGTGCTACCCTGAGGGACAGGGATGGAGAC +
Preference number: 3 (lower is better)
Translates to: RDTARTLQFPQS*HGATLRDRDGD
Trigger: GTCTCCATCCCTGTCCCTCAGGGTAGCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR GCA 72 bp CATACCTTTAGGGCCTCTGCCATCGTCTGCCGCACCTaGTCCTGCACCAACTGCCATGGGAACCGAAGGATC +
Preference number: 3 (lower is better)
Translates to: HTFRASAIVCRT*SCTNCHGNRRI
Trigger: GATCCTTCGGTTCCCATGGCAGTTGGTGCAGGAGCAGGTGCGGCAGACGATGGCAGAGGCCCTAAAGGTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
3UTR GCA 72 bp CACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTaGCTCGGAAGAAGTAGATCTTGTTCTTCTCGGGAC +
Preference number: 3 (lower is better)
Translates to: HAGCWGGNASSP*LGRSRSCSSRD
Trigger: GTCCCGAGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
3UTR-3UTR CAA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCGGTCAGAGGAAAGTGTaGGCAGGCTCGGCACAGCCA +
Preference number: 3 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCGQRKV*AGSAQP
Trigger: TGGCTGTGCCGAGCCTGCCAACACTTTCCTCTGACC...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
3UTR GCA 72 bp CATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATaGCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCT +
Preference number: 3 (lower is better)
Translates to: HSGPKTALPLKS*QSLPAQSETVA
Trigger: AGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CAA 90 bp GCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGATCAGTTGTCATGGTGGTaGTACCCCACCCCATCCCCC +
Preference number: 3 (lower is better)
Translates to: AWILENRFPGLSARRQTDQLSWW*YPTPSP
Trigger: GGGGGATGGGGTGGGGTACAACCACCATGACAACTG...ATCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
3UTR-3UTR CAA 90 bp GCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGATGGTCAGAGGAAAGTGTaGGCAGGCTCGGCACAGCCA +
Preference number: 3 (lower is better)
Translates to: AWILENRFPGLSARRQTDGQRKV*AGSAQP
Trigger: TGGCTGTGCCGAGCCTGCCAACACTTTCCTCTGACC...ATCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp GCATGGACCGGGAACCTCACCAGGCCCAGCTCGGTGAGGGGTGCGGGGCCCAGGCAGCTCGGTGAGGGGTaGGGGGCCCAGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: AWTGNLTRPSSVRGAGPRQLGEG*GAQDWL
Trigger: AAGCCAGTCCTGGGCCCCGCACCCCTCACCGAGCTG...CCTGGGCCCCGCACCCCTCACCGAGCTGGGCCTGGTGAGGTTCCCGGTCCATGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp GTGACCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCACAGCGGGGAGGCCTaGGGCTGCTGGCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: VTTTCVALPAVVMVVVPHHSGEA*GCWQAG
Trigger: CCCGGCCTGCCAGCAGCCTCAGGCCTCCCCGCTGTG...GTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGGTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp AGTCAGTGGCCCTGCGGGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGACACTCCCTGGGCCCCTaGAGGCTGGACTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SQWPCGARDCLHAGCWGGHSLGP*RLDCPG
Trigger: TCCAGGGCAGTCCAGCCTGCAGGGGCCCAGGGAGTG...TCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCAGGGCCACTGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp GAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGGCCCCTCCTCTCGGCATaGAGGTGGTGGGCGTCCGGC +
Preference number: 4 (lower is better)
Translates to: EGSVDLRGHPSPVSGPAGPLLSA*RWWASG
Trigger: GCCGGACGCCCACCACCTCCATGCCGAGAGGAGGGG...CCCCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp AGTCAGTGGCCCTGCGGGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGACCCTGCAGGCTGGACTaGCCTGGAACCCACGCAGGT +
Preference number: 4 (lower is better)
Translates to: SQWPCGARDCLHAGCWGGPCRLD*PGTHAG
Trigger: ACCTGCGTGGGTTCCAGGGCAGTCCAGCCTGCAGGG...TCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCAGGGCCACTGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp GCATGGACCGGGAACCTCACCAGGCCCAGCTCGGTGAGGGGTGCGGGGCCCAGGCCGCCACTGTGGACCTaGTTGACCCCTACCACAGAC +
Preference number: 4 (lower is better)
Translates to: AWTGNLTRPSSVRGAGPRPPLWT*LTPTTD
Trigger: GTCTGTGGTAGGGGTCAAGCAGGTCCACAGTGGCGG...CCTGGGCCCCGCACCCCTCACCGAGCTGGGCCTGGTGAGGTTCCCGGTCCATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp TCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGGCACGGGACTGGGCCTCACAGGCATCTaGCGGGGCGTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SISEGTPLQSVALRGTGLGLTGI*RGVWLQ
Trigger: CTGGAGCCAGACGCCCCGCCAGATGCCTGTGAGGCC...CAGTCCCGTGCCCCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434318.1
ENST00000437086.5
ENST00000627283.1
ENST00000629514.2
CDS-3UTR CCA 90 bp TGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGCCCCTCTCCAGTCAGTaGCCCTGCGGGGCACGGGAC +
Preference number: 4 (lower is better)
Translates to: WKAASISEGTPLQSVALRPLSSQ*PCGARD
Trigger: GTCCCGTGCCCCGCAGGGCCACTGACTGGAGAGGGG...CCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434318.1
ENST00000437086.5
ENST00000627283.1
ENST00000629514.2
CDS-3UTR GCA 90 bp TGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGCTACTGGGCAGGGCTaGATGCCAGGGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: WKAASISEGTPLQSVALRATGQG*MPGLWP
Trigger: GGGCCACAGCCCTGGCATGCAGCCCTGCCCAGTAGC...CCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp TCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGGCACGGGACTGGCCTCTGCCATCGTCTaGCGCACCTGCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: SISEGTPLQSVALRGTGLASAIV*RTCSCT
Trigger: GGTGCAGGAGCAGGTGCGGCAGACGATGGCAGAGGC...CAGTCCCGTGCCCCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp AGGCCAATAATGCCTGCTCAGCACCCCACCCGCAGAGGGAAGCGGGAGGCCTGGCACTCCCTGGGCCCCTaGAGGCTGGACTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: RPIMPAQHPTRRGKREAWHSLGP*RLDCPG
Trigger: TCCAGGGCAGTCCAGCCTGCAGGGGCCCAGGGAGTG...CCAGGCCTCCCGCTTCCCTCTGCGGGTGGGGTGCTGAGCAGGCATTATTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp GTGACCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACTCGGCATGGAGGTGGTaGGCGTCCGGCGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VTTTCVALPAVVMVVVPHSAWRW*ASGGRA
Trigger: GGCTCTGCCGCCGGACGCCCACCACCTCCATGCCGA...GTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGTGTCTATCCCAGCCTaGGGGCCCAGGGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: WKAASISEGTPLQSVALRVSIPA*GPRAGV
Trigger: GACCCCAGCCCTGGGCCCCCAGGCTGGGATAGACAC...CCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434318.1
ENST00000437086.5
ENST00000627283.1
ENST00000629514.2
CDS-3UTR CCA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCAGTGTCTATCCCAGCCTaGGGGCCCAGGGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPVSIPA*GPRAGV
Trigger: GACCCCAGCCCTGGGCCCCCAGGCTGGGATAGACAC...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCTGCGGGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGCGAGAGGCCAATGCTaGGTAGCCGGGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PAGHGTVYTPGAGVETPVARGQC*VAGLQL
Trigger: CAGCTGCAGCCCGGCTACCCAGCATTGGCCTCTCGC...TACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp AGGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCACAGCGGGGAGGCCTaGGGCTGCTGGCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RYVAASRAWGLLHEEYPSHSGEA*GCWQAG
Trigger: CCCGGCCTGCCAGCAGCCTCAGGCCTCCCCGCTGTG...GGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp TCCTGCACCAACTGCCATGGGAACCGAAGGATCCCACGGACACACAGGTGGCATCACAGCGGGGAGGCCTaGGGCTGCTGGCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SCTNCHGNRRIPRTHRWHHSGEA*GCWQAG
Trigger: CCCGGCCTGCCAGCAGCCTCAGGCCTCCCCGCTGTG...ATGCCACCTGTGTGTCCGTGGGATCCTTCGGTTCCCATGGCAGTTGGTGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR TCA 90 bp GCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCACAGCGGGGAGGCCTaGGGCTGCTGGCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ARRQTDAGTYQDLTSGSGHSGEA*GCWQAG
Trigger: CCCGGCCTGCCAGCAGCCTCAGGCCTCCCCGCTGTG...GCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGCCTCTGCCATCGTCTaGCGCACCTGCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: WKAASISEGTPLQSVALRASAIV*RTCSCT
Trigger: GGTGCAGGAGCAGGTGCGGCAGACGATGGCAGAGGC...CCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp CCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCATCCCCCTCATGGGCTGCCACCTaGAGCAGGTCTGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PAWPSRQLSWWLYPTPSPSWAAT*SRSVPW
Trigger: CCAGGGCACAGACCTGCTGCAGGTGGCAGCCCATGA...GGGGGATGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCATCCCCCGCCCTACAGCCCAGTTaGTCAGCCAGGGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: PAWPSRQLSWWLYPTPSPALQPS*SARAEG
Trigger: GCCTTCAGCCCTGGCTGAGCAACTGGGCTGTAGGGC...GGGGGATGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp ATGCAGGCCAATAATGCCTGCTCAGCACCCCACCCGCAGAGGGAAGCGGGAGGCGTGTCTATCCCAGCCTaGGGGCCCAGGGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: MQANNACSAPHPQREAGGVSIPA*GPRAGV
Trigger: GACCCCAGCCCTGGGCCCCCAGGCTGGGATAGACAC...GCCTCCCGCTTCCCTCTGCGGGTGGGGTGCTGAGCAGGCATTATTGGCCTGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp TCTTCTCGGGACCCCAGACCAAGGCAGCATGGACCGGGAACCTCACCAGGCCCAGTGTCTATCCCAGCCTaGGGGCCCAGGGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SSRDPRPRQHGPGTSPGPVSIPA*GPRAGV
Trigger: GACCCCAGCCCTGGGCCCCCAGGCTGGGATAGACAC...TGGGCCTGGTGAGGTTCCCGGTCCATGCTGCCTTGGTCTGGGGTCCCGAGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp GCATGGACCGGGAACCTCACCAGGCCCAGCTCGGTGAGGGGTGCGGGGCCCAGGGCGGTGCAATCTCATTaGTGTCTATCCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: AWTGNLTRPSSVRGAGPRAVQSH*CLSQPG
Trigger: CCCAGGCTGGGATAGACACCAATGAGATTGCACCGC...CCTGGGCCCCGCACCCCTCACCGAGCTGGGCCTGGTGAGGTTCCCGGTCCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp GAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGGATCTGGCGGGGCGTCTaGCTCCAGCGGTGCAATCTC +
Preference number: 4 (lower is better)
Translates to: EGSVDLRGHPSPVSGPAGIWRGV*LQRCNL
Trigger: GAGATTGCACCGCTGGAGCCAGACGCCCCGCCAGAT...CCCCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434318.1
ENST00000437086.5
ENST00000627283.1
ENST00000629514.2
CDS-3UTR CCA 90 bp TCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGGCACGGGACTGGCTCGCCTCGGATGGTaGAGACCGCGTCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SISEGTPLQSVALRGTGLARLGW*RPRQRR
Trigger: CCTCCTTTGACGCGGTCTCCACCATCCGAGGCGAGC...CAGTCCCGTGCCCCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434318.1
ENST00000437086.5
ENST00000627283.1
ENST00000629514.2
CDS-3UTR CCA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCAGGCAGTCCCTGCCAGTaGCGAGAGGCCAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPGSPCQ*REANAG
Trigger: CCCAGCATTGGCCTCTCGCCACTGGCAGGGACTGCC...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GGGACTGTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGGCAGTCCCTGCCAGTaGCGAGAGGCCAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: GTVYTPGAGVETPVVPASGSPCQ*REANAG
Trigger: CCCAGCATTGGCCTCTCGCCACTGGCAGGGACTGCC...CGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp TCTTCTCGGGACCCCAGACCAAGGCAGCATGGACCGGGAACCTCACCAGGCCCACAGCGTCCACAGGGCTaGGCAGTCCCTGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SSRDPRPRQHGPGTSPGPQRPQG*AVPASG
Trigger: GCCACTGGCAGGGACTGCCCAGCCCTGTGGACGCTG...TGGGCCTGGTGAGGTTCCCGGTCCATGCTGCCTTGGTCTGGGGTCCCGAGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp CACCGTCGTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCAAGGACCCCCTCTCCAGTCAGTaGCCCTGCGGGGCACGGGAC +
Preference number: 4 (lower is better)
Translates to: HRRTPSTEHLPEREGCKDPLSSQ*PCGARD
Trigger: GTCCCGTGCCCCGCAGGGCCACTGACTGGAGAGGGG...GTCCTTGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp CCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGCACAGCGGGGAGGCCTaGGGCTGCTGGCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PFLLSHAKASLPSLRQSLHSGEA*GCWQAG
Trigger: CCCGGCCTGCCAGCAGCCTCAGGCCTCCCCGCTGTG...CAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCCCCCTCCTCTCGGCATaGAGGTGGTGGGCGTCCGGC +
Preference number: 4 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPPLLSA*RWWASG
Trigger: GCCGGACGCCCACCACCTCCATGCCGAGAGGAGGGG...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGTGGCGTCACATCGCTCCATACCTTTAGGGCCTCTGCCATCGTCTGCCGCACCCCCCTCCTCTCGGCATaGAGGTGGTGGGCGTCCGGC +
Preference number: 4 (lower is better)
Translates to: SGVTSLHTFRASAIVCRTPLLSA*RWWASG
Trigger: GCCGGACGCCCACCACCTCCATGCCGAGAGGAGGGG...GGTGCGGCAGACGATGGCAGAGGCCCTAAAGGTATGGAGCGATGTGACGCCACT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR CCA 90 bp CCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCATCCCCCCAGACCAAGGCAGCATaGACCGGGAACCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: PAWPSRQLSWWLYPTPSPQTKAA*TGNLTR
Trigger: CCTGGTGAGGTTCCCGGTCCATGCTGCCTTGGTCTG...GGGGGATGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR CCA 90 bp TCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGGCACGGGACTGCTACACGCCGGGTGCTaGGGTGGAAACGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: SISEGTPLQSVALRGTGLLHAGC*GGNASS
Trigger: ACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAG...CAGTCCCGTGCCCCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434318.1
ENST00000437086.5
ENST00000627283.1
ENST00000629514.2
CDS-3UTR CCA 90 bp CCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCATCCCCCCTACACGCCGGGTGCTaGGGTGGAAACGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: PAWPSRQLSWWLYPTPSPLHAGC*GGNASS
Trigger: ACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAG...GGGGGATGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGCCCCTCTCCAGTCAGTaGCCCTGCGGGGCACGGGAC +
Preference number: 4 (lower is better)
Translates to: SGPKTALPLKSCQSLPAQPLSSQ*PCGARD
Trigger: GTCCCGTGCCCCGCAGGGCCACTGACTGGAGAGGGG...CTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCAGGTGACCACCCCCTCTCCAGTCAGTaGCCCTGCGGGGCACGGGAC +
Preference number: 4 (lower is better)
Translates to: SHAKASLPSLRQSLAGDHPLSSQ*PCGARD
Trigger: GTCCCGTGCCCCGCAGGGCCACTGACTGGAGAGGGG...GTGGTCACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp GGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGTGACAAATGCCTACTaGCCACTCCCTGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GHGTVYTPGAGVETPVVPVTNAY*PLPGPL
Trigger: CAGGGGCCCAGGGAGTGGTCAGTAGGCATTTGTCAC...AGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp GCATGGACCGGGAACCTCACCAGGCCCAGCTCGGTGAGGGGTGCGGGGCCCAGGACTGGCATTTGGCTGTaGCAAATGCCTACTGACCAC +
Preference number: 4 (lower is better)
Translates to: AWTGNLTRPSSVRGAGPRTGIWL*QMPTDH
Trigger: GTGGTCAGTAGGCATTTGTCACAGCCAAATGCCAGT...CCTGGGCCCCGCACCCCTCACCGAGCTGGGCCTGGTGAGGTTCCCGGTCCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp TCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGGCACGGGACTGCACTGTGGACCTGCTTaGCCCCTACCACAGACTCTC +
Preference number: 4 (lower is better)
Translates to: SISEGTPLQSVALRGTGLHCGPA*PLPQTL
Trigger: GAGAGTCTGTGGTAGGGGTCAAGCAGGTCCACAGTG...CAGTCCCGTGCCCCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp AGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGGCTACTGGGCAGGGCTaGATGCCAGGGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SGPKTALPLKSCQSLPAQATGQG*MPGLWP
Trigger: GGGCCACAGCCCTGGCATGCAGCCCTGCCCAGTAGC...CTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCATCCCCCATCGTCTGCCGCACCTaGTCCTGCACCAACTGCCAT +
Preference number: 4 (lower is better)
Translates to: PAWPSRQLSWWLYPTPSPIVCRT*SCTNCH
Trigger: ATGGCAGTTGGTGCAGGAGCAGGTGCGGCAGACGAT...GGGGGATGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GTGACCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACGGCAGGTCGTCCCCATaGCAGTACCTGGCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: VTTTCVALPAVVMVVVPHGRSSP*QYLAKS
Trigger: CGACTTCGCCAGGTACTGGCATGGGGACGACCTGCC...GTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp AGATGGCCATGGGTCTCTAGCCTGATATTCGTGGCCTGGCAGGGGTCAGCACCCCAGCTCGGTGAGGGGTaGGGGGCCCAGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: RWPWVSSLIFVAWQGSAPQLGEG*GAQDWL
Trigger: AAGCCAGTCCTGGGCCCCGCACCCCTCACCGAGCTG...GGGTGCTGACCCCTGCCAGGCCACGAATATCAGGCTAGAGACCCATGGCCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR GCA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCACTCAGGAAGTGGCCCTaGCCTACAGCCCAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPLRKWP*PTAQLL
Trigger: GAGCAACTGGGCTGTAGGGCAGGGCCACTTCCTGAG...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGGGCCTGGGGTCTCCTaGATGAAGAATACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: WKAASISEGTPLQSVALRGPGVS*MKNTPP
Trigger: GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCC...CCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CCA 90 bp CATGGGAACCGAAGGATCCCACGGACACACAGGTGGCATCCTAGTGTCCTGCTCTCGGCATGGAGGTGGTaGGCGTCCGGCGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HGNRRIPRTHRWHPSVLLSAWRW*ASGGRA
Trigger: GGCTCTGCCGCCGGACGCCCACCACCTCCATGCCGA...GAGCAGGACACTAGGATGCCACCTGTGTGTCCGTGGGATCCTTCGGTTCCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR CCA 90 bp AGATGGCCATGGGTCTCTAGCCTGATATTCGTGGCCTGGCAGGGGTCAGCACCCCAGGTGCCGGGCTACTaGGCAGGGCTGCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: RWPWVSSLIFVAWQGSAPQVPGY*AGLHAR
Trigger: CCTGGCATGCAGCCCTGCCCAGTAGCCCGGCACCTG...GGGTGCTGACCCCTGCCAGGCCACGAATATCAGGCTAGAGACCCATGGCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCATGCAGCCCCAGCACGTaGCCAAATTCATGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPCSPST*PNSWAA
Trigger: GGCAGCCCATGAATTTGGCCACGTGCTGGGGCTGCA...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGGGCCCCTGCAGTCATCTaGGCTGAGACTCAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: EGSVDLRGHPSPVSGPAGAPAVI*AETQWV
Trigger: TACCCACTGAGTCTCAGCCCAGATGACTGCAGGGGC...CCCCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000434318.1
ENST00000437086.5
ENST00000627283.1
ENST00000629514.2
CDS-3UTR CCA 90 bp AGATGGCCATGGGTCTCTAGCCTGATATTCGTGGCCTGGCAGGGGTCAGCACCCGTGTCTATCCCAGCCTaGGGGCCCAGGGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RWPWVSSLIFVAWQGSAPVSIPA*GPRAGV
Trigger: GACCCCAGCCCTGGGCCCCCAGGCTGGGATAGACAC...GGGTGCTGACCCCTGCCAGGCCACGAATATCAGGCTAGAGACCCATGGCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CTGCCATGCCCCGCCACTGTGGACCTGCTTGACCCCTACCACAGACTCTCCCAGGCTCGCCTCGGATGGTaGAGACCGCGTCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LPCPATVDLLDPYHRLSQARLGW*RPRQRR
Trigger: CCTCCTTTGACGCGGTCTCCACCATCCGAGGCGAGC...CTGGGAGAGTCTGTGGTAGGGGTCAAGCAGGTCCACAGTGGCGGGGCATGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp TGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGAGAGCTCGCCTCGGATaGTGGAGACCGCGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: WKAASISEGTPLQSVALRRARLG*WRPRQR
Trigger: CCTTTGACGCGGTCTCCACCATCCGAGGCGAGCTCT...CCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434318.1
ENST00000437086.5
ENST00000627283.1
ENST00000629514.2
CDS-3UTR CCA 90 bp TGCGGGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTAGAGCTCGCCTCGGATaGTGGAGACCGCGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: CGARDCLHAGCWGGNASSRARLG*WRPRQR
Trigger: CCTTTGACGCGGTCTCCACCATCCGAGGCGAGCTCT...ACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp CACCGTCGTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCAAGGACGCGAGAGGCCAATGCTaGGTAGCCGGGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HRRTPSTEHLPEREGCKDARGQC*VAGLQL
Trigger: CAGCTGCAGCCCGGCTACCCAGCATTGGCCTCTCGC...GTCCTTGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCCAGCGTCCACAGGGCTaGGCAGTCCCTGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPQRPQG*AVPASG
Trigger: GCCACTGGCAGGGACTGCCCAGCCCTGTGGACGCTG...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCATGGCGAAGTCGATCATaGTGTCAGCACGGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPWRSRS*CQHGPR
Trigger: ACGAGGGCCGTGCTGACATCATGATCGACTTCGCCA...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCACATGGGTCTCTAGCCTaGTATTCGTGGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPHGSLA*YSWPGR
Trigger: CCTGCCAGGCCACGAATATCAGGCTAGAGACCCATG...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCCCCACCCCATCCCCCTaGGGAGACATGGGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPPTPSP*GDMGSV
Trigger: GACTGAGCCCATGTCTCCTCAGGGGGATGGGGTGGG...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp AGGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCACAGTCGCTGGCAGGTaGCCACGACCTGCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RYVAASRAWGLLHEEYPSTVAGR*PRPAWP
Trigger: GGGCCACGCAGGTCGTGGTCACCTGCCAGCGACTGT...GGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp AGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCAGGTGACCACCCTCCCTGCCCAGTCTaGGACAGTCGCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SHAKASLPSLRQSLAGDHPPCPV*DSRWQV
Trigger: CACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGG...GTGGTCACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp CAGCCAAAGAAGTCAGGACCCACGAGACGGGGGAAGCCTTCCAGAGCCTTCACCCCTCCCTGCCCAGTCTaGGACAGTCGCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QPKKSGPTRRGKPSRAFTPPCPV*DSRWQV
Trigger: CACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGG...GGTGAAGGCTCTGGAAGGCTTCCCCCGTCTCGTGGGTCCTGACTTCTTTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp TCCTGCACCAACTGCCATGGGAACCGAAGGATCCCACGGACACACAGGTGGCATGCTACTGGGCAGGGCTaGATGCCAGGGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SCTNCHGNRRIPRTHRWHATGQG*MPGLWP
Trigger: GGGCCACAGCCCTGGCATGCAGCCCTGCCCAGTAGC...ATGCCACCTGTGTGTCCGTGGGATCCTTCGGTTCCCATGGCAGTTGGTGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR GCA 90 bp GAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGGTCAGCACGGCCCTCGTaGACCTCAGTAAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: EGSVDLRGHPSPVSGPAGSARPS*TSVKVS
Trigger: ACTCACCTTTACTGAGGTGCACGAGGGCCGTGCTGA...CCCCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp GAGGGCTGCCTGGGCGGCTGCTCCTTCCACTGGCATTTGGCTGTGACAAATGCCGCTGCTGTTGTGTGCTaGAGCCCCAGCACGTGGCCA +
Preference number: 4 (lower is better)
Translates to: EGCLGGCSFHWHLAVTNAAAVVC*SPSTWP
Trigger: TGGCCACGTGCTGGGGCTGCAGCACACAACAGCAGC...GGCATTTGTCACAGCCAAATGCCAGTGGAAGGAGCAGCCGCCCAGGCAGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp TCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGTTGGCTGCTGTTGTGTaGTGCAGCCCCAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: SWKAASISEGTPLQSVALLAAVV*CSPSTW
Trigger: CCACGTGCTGGGGCTGCAGCACACAACAGCAGCCAA...CAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434318.1
ENST00000437086.5
ENST00000627283.1
ENST00000629514.2
CDS-3UTR GCA 90 bp CATCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCCATCAGGGCCTTGGCTaGTGTTGTGTGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: HPGRQRRSQRAPLSSQWPHQGLG*CCVLQP
Trigger: GGGCTGCAGCACACAACAGCAGCCAAGGCCCTGATG...GGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434318.1
ENST00000437086.5
ENST00000627283.1
ENST00000629514.2
CDS-3UTR GCA 90 bp GCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCAGCTCGGTGAGGGGTaGGGGGCCCAGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: ARRQTDAGTYQDLTSGSGQLGEG*GAQDWL
Trigger: AAGCCAGTCCTGGGCCCCGCACCCCTCACCGAGCTG...GCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR GCA 90 bp GAGGGCTGCCTGGGCGGCTGCTCCTTCCACTGGCATTTGGCTGTGACAAATGCCTCCAGTCAGTGGCCCTaGGGGGCACGGGACTGTCTA +
Preference number: 4 (lower is better)
Translates to: EGCLGGCSFHWHLAVTNASSQWP*GARDCL
Trigger: TAGACAGTCCCGTGCCCCGCAGGGCCACTGACTGGA...GGCATTTGTCACAGCCAAATGCCAGTGGAAGGAGCAGCCGCCCAGGCAGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp GTGACCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCAGTCCTGCCATGGTaGTACCCTGAGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: VTTTCVALPAVVMVVVPHPVLPW*YPEGQG
Trigger: TCCCTGTCCCTCAGGGTAGCACCATGGCAGGACTGG...GTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCAAGGATTGAGGTATGTTaGAGCCTCCAGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPRIEVC*SLQGLG
Trigger: CCCCAGGCCCTGGAGGCTGCAACATACCTCAATCCT...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CATCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCCCAGTACTGAGCACCTaGCGGAGAGGGAAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: HPGRQRRSQRAPLSSQWPPVLST*RRGKAA
Trigger: TGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGG...GGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp CAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCATCGGCATGGAGGTGGTaGGCGTCCGGCGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QCQPLEGTSQQGYSKDTPSAWRW*ASGGRA
Trigger: GGCTCTGCCGCCGGACGCCCACCACCTCCATGCCGA...TGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCTCGGCATGGAGGTGGTaGGCGTCCGGCGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LPLKSCQSLPAQSETVAGSAWRW*ASGGRA
Trigger: GGCTCTGCCGCCGGACGCCCACCACCTCCATGCCGA...GCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp ACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCTACCCCTCTCGGCATGGAGGTaGTGGGCGTCCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: TGIQQGHSSSPSPAMVLPLSAWR*WASGGR
Trigger: TCTGCCGCCGGACGCCCACCACCTCCATGCCGAGAG...GGGTAGCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GAGCCTTCACCTTCACAGGGTCAAACTTCCAGTAGAGGCGGCCGCGCAGGAAGTCTCTCGGCATGGAGGTaGTGGGCGTCCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: EPSPSQGQTSSRGGRAGSLSAWR*WASGGR
Trigger: TCTGCCGCCGGACGCCCACCACCTCCATGCCGAGAG...ACTTCCTGCGCGGCCGCCTCTACTGGAAGTTTGACCCTGTGAAGGTGAAGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CCA 90 bp CCTTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGCCCCTCCTCTCGGCATaGAGGTGGTGGGCGTCCGGC +
Preference number: 4 (lower is better)
Translates to: PCFSASPWKEPHNRDTARPLLSA*RWWASG
Trigger: GCCGGACGCCCACCACCTCCATGCCGAGAGGAGGGG...CCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCAAGCAGGTCTGTGCCCTaGTCATCCCCGATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPSRSVP*SSPIVQ
Trigger: CTGGACTATCGGGGATGACCAGGGCACAGACCTGCT...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCACGGACATCAGGGCCTTaGCTGCTGTTGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPRTSGP*LLLCAA
Trigger: TGCAGCACACAACAGCAGCCAAGGCCCTGATGTCCG...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCCCTGCAGTCATCTaGGCTGAGACTCAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: GHGTVYTPGAGVETPVVPAPAVI*AETQWV
Trigger: TACCCACTGAGTCTCAGCCCAGATGACTGCAGGGGC...AGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp GATCTTGTTCTTCTCGGGACCCCAGACCAAGGCAGCATGGACCGGGAACCTCACGGCCTCACAGGCATCTaGCGGGGCGTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DLVLLGTPDQGSMDREPHGLTGI*RGVWLQ
Trigger: CTGGAGCCAGACGCCCCGCCAGATGCCTGTGAGGCC...GTGAGGTTCCCGGTCCATGCTGCCTTGGTCTGGGGTCCCGAGAAGAACAAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp CTGCCATGCCCCGCCACTGTGGACCTGCTTGACCCCTACCACAGACTCTCCCAGAGAGCTCGCCTCGGATaGTGGAGACCGCGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LPCPATVDLLDPYHRLSQRARLG*WRPRQR
Trigger: CCTTTGACGCGGTCTCCACCATCCGAGGCGAGCTCT...CTGGGAGAGTCTGTGGTAGGGGTCAAGCAGGTCCACAGTGGCGGGGCATGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp AGGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCAGCGTCCACAGGGCTaGGCAGTCCCTGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RYVAASRAWGLLHEEYPSQRPQG*AVPASG
Trigger: GCCACTGGCAGGGACTGCCCAGCCCTGTGGACGCTG...GGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp ACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCTACCCCAGCGTCCACAGGGCTaGGCAGTCCCTGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TGIQQGHSSSPSPAMVLPQRPQG*AVPASG
Trigger: GCCACTGGCAGGGACTGCCCAGCCCTGTGGACGCTG...GGGTAGCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp ATGCAGGCCAATAATGCCTGCTCAGCACCCCACCCGCAGAGGGAAGCGGGAGGCCTACACGCCGGGTGCTaGGGTGGAAACGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: MQANNACSAPHPQREAGGLHAGC*GGNASS
Trigger: ACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAG...GCCTCCCGCTTCCCTCTGCGGGTGGGGTGCTGAGCAGGCATTATTGGCCTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp CCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTCCCCTCTCCAGTCAGTaGCCCTGCGGGGCACGGGAC +
Preference number: 4 (lower is better)
Translates to: PHNRDTARTLQFPQSCHGPLSSQ*PCGARD
Trigger: GTCCCGTGCCCCGCAGGGCCACTGACTGGAGAGGGG...ACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CACCGTCGTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCAAGGACCATGCCCCGCCACTGTaGACCTGCTTGACCCCTACC +
Preference number: 4 (lower is better)
Translates to: HRRTPSTEHLPEREGCKDHAPPL*TCLTPT
Trigger: GGTAGGGGTCAAGCAGGTCCACAGTGGCGGGGCATG...GTCCTTGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp AGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCACAGTCGCTGGCAGGTaGCCACGACCTGCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RTCIAGPRLPFLLSHAKATVAGR*PRPAWP
Trigger: GGGCCACGCAGGTCGTGGTCACCTGCCAGCGACTGT...GGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCACAGTCGCTGGCAGGTaGCCACGACCTGCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCTVAGR*PRPAWP
Trigger: GGGCCACGCAGGTCGTGGTCACCTGCCAGCGACTGT...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp GGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGCCTCCCTGCCCAGTCTaGGACAGTCGCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GPRLPFLLSHAKASLPSLPPCPV*DSRWQV
Trigger: CACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGG...CAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp GCACGGCCCTCGTGCACCTCAGTAAAGGTGAGTGGCGTCACATCGCTCCATACCGCCCCTACCTGTAGGTaGGGTCCGTCTTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ARPSCTSVKVSGVTSLHTAPTCR*GPSSPS
Trigger: GCTGGGAGAAGACGGACCTCACCTACAGGTAGGGGC...GGTATGGAGCGATGTGACGCCACTCACCTTTACTGAGGTGCACGAGGGCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR GCA 90 bp GACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCGCTACTGGGCAGGGCTaGATGCCAGGGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: DLHSGPKTALPLKSCQSLATGQG*MPGLWP
Trigger: GGGCCACAGCCCTGGCATGCAGCCCTGCCCAGTAGC...GAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TCCTGCACCAACTGCCATGGGAACCGAAGGATCCCACGGACACACAGGTGGCATGCCTCTGCCATCGTCTaGCGCACCTGCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: SCTNCHGNRRIPRTHRWHASAIV*RTCSCT
Trigger: GGTGCAGGAGCAGGTGCGGCAGACGATGGCAGAGGC...ATGCCACCTGTGTGTCCGTGGGATCCTTCGGTTCCCATGGCAGTTGGTGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR GCA 90 bp TGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGTCAGCACGGCCCTCGTaGACCTCAGTAAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: WKAASISEGTPLQSVALRSARPS*TSVKVS
Trigger: ACTCACCTTTACTGAGGTGCACGAGGGCCGTGCTGA...CCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp CAGCCAAAGAAGTCAGGACCCACGAGACGGGGGAAGCCTTCCAGAGCCTTCACCTCATGGGCTGCCACCTaGAGCAGGTCTGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QPKKSGPTRRGKPSRAFTSWAAT*SRSVPW
Trigger: CCAGGGCACAGACCTGCTGCAGGTGGCAGCCCATGA...GGTGAAGGCTCTGGAAGGCTTCCCCCGTCTCGTGGGTCCTGACTTCTTTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp TGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGCCAAATTCATGGGCTaGCACCTGCAGCAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: WKAASISEGTPLQSVALRAKFMG*HLQQVC
Trigger: ACAGACCTGCTGCAGGTGGCAGCCCATGAATTTGGC...CCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp GTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAACATCAGGGCCTTGGCTaGTGTTGTGTGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VYTPGAGVETPVVPASEEHQGLG*CCVLQP
Trigger: GGGCTGCAGCACACAACAGCAGCCAAGGCCCTGATG...TTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp CCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTCGGGACCCCAGACCAAGGCAGCAGCTCGGTGAGGGGTaGGGGGCCCAGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: PCLGRSRSCSSRDPRPRQQLGEG*GAQDWL
Trigger: AAGCCAGTCCTGGGCCCCGCACCCCTCACCGAGCTG...CTGCCTTGGTCTGGGGTCCCGAGAAGAACAAGATCTACTTCTTCCGAGGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp AGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCAGGTGACCACCAGGGCAGCCAGGTTTaGCAGGACCTGCATAGCGGG +
Preference number: 4 (lower is better)
Translates to: SHAKASLPSLRQSLAGDHQGSQV*QDLHSG
Trigger: CCCGCTATGCAGGTCCTGGCAAACCTGGCTGCCCTG...GTGGTCACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGGGCCCCAGCACCCTTaGTTCAGTGCCAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PHNRDTARTLQFPQSCHGGPQHP*FSASPW
Trigger: CCAGGGGCTGGCACTGAAGCAAGGGTGCTGGGGCCC...ACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp AGGCCAATAATGCCTGCTCAGCACCCCACCCGCAGAGGGAAGCGGGAGGCCTGGCCCTGGCATCTGCAATaGTCCAGGCTCTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: RPIMPAQHPTRRGKREAWPWHLQ*SRLSSL
Trigger: CAGAGATGAGAGCCTGGAGCATTGCAGATGCCAGGG...CCAGGCCTCCCGCTTCCCTCTGCGGGTGGGGTGCTGAGCAGGCATTATTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp AGTCAGTGGCCCTGCGGGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGATTTGGCTGTGACAAATaGCTACTGACCACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SQWPCGARDCLHAGCWGGFGCDK*LLTTPW
Trigger: CCAGGGAGTGGTCAGTAGGCATTTGTCACAGCCAAA...TCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCAGGGCCACTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp ATCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTCCGCCACTGTGGACCTaGTTGACCCCTACCACAGAC +
Preference number: 4 (lower is better)
Translates to: ILEGSVDLRGHPSPVSGPPPLWT*LTPTTD
Trigger: GTCTGTGGTAGGGGTCAAGCAGGTCCACAGTGGCGG...AGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp GCAGAGGGAAGCGGGAGGCCTGGGATAAGCTGGGGCAGTGAATGCTCTGTAAACCAGCCACCACTGCCATaGCCCGCCACTGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: AEGSGRPGISWGSECSVNQPPLP*PATVDL
Trigger: CAGGTCCACAGTGGCGGGGCATGGCAGTGGTGGCTG...GTTTACAGAGCATTCACTGCCCCAGCTTATCCCAGGCCTCCCGCTTCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp GATCTTGTTCTTCTCGGGACCCCAGACCAAGGCAGCATGGACCGGGAACCTCACCAGCCACCACTGCCATaGCCCGCCACTGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: DLVLLGTPDQGSMDREPHQPPLP*PATVDL
Trigger: CAGGTCCACAGTGGCGGGGCATGGCAGTGGTGGCTG...GTGAGGTTCCCGGTCCATGCTGCCTTGGTCTGGGGTCCCGAGAAGAACAAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp GTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAACCAGTACTGAGCACCTaGCGGAGAGGGAAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VYTPGAGVETPVVPASEEPVLST*RRGKAA
Trigger: TGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGG...TTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp CCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTCTCTCGGCATGGAGGTaGTGGGCGTCCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: PHNRDTARTLQFPQSCHGLSAWR*WASGGR
Trigger: TCTGCCGCCGGACGCCCACCACCTCCATGCCGAGAG...ACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTCTCTCGGCATGGAGGTaGTGGGCGTCCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: RRQTDAGTYQDLTSGSGPLSAWR*WASGGR
Trigger: TCTGCCGCCGGACGCCCACCACCTCCATGCCGAGAG...AGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGCAGGTGCCGGGCTACTaGGCAGGGCTGCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: PFLLSHAKASLPSLRQSLQVPGY*AGLHAR
Trigger: CCTGGCATGCAGCCCTGCCCAGTAGCCCGGCACCTG...CAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTCAGGTGCCGGGCTACTaGGCAGGGCTGCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: RRQTDAGTYQDLTSGSGPQVPGY*AGLHAR
Trigger: CCTGGCATGCAGCCCTGCCCAGTAGCCCGGCACCTG...AGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AAGTCAGGACCCACGAGACGGGGGAAGCCTTCCAGAGCCTTCACCTTCACAGGGACTCAGCCCATCAGATaGGTCGGGCACGCCACAGCG +
Preference number: 4 (lower is better)
Translates to: KSGPTRRGKPSRAFTFTGTQPIR*VGHATA
Trigger: CGCTGTGGCGTGCCCGACCCATCTGATGGGCTGAGT...CCCTGTGAAGGTGAAGGCTCTGGAAGGCTTCCCCCGTCTCGTGGGTCCTGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CCA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCACTTCTCGGTGAGTCTTaGGGAAGAAGGCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPLLGES*GRRHGP
Trigger: TGGCCCATGCCTTCTTCCCCAAGACTCACCGAGAAG...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CATCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCGCCCCTGCAGTCATCTaGGCTGAGACTCAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: HPGRQRRSQRAPLSSQWPAPAVI*AETQWV
Trigger: TACCCACTGAGTCTCAGCCCAGATGACTGCAGGGGC...GGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434318.1
ENST00000437086.5
ENST00000627283.1
ENST00000629514.2
CDS-3UTR CCA 90 bp CTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCGTGTCTATCCCAGCCTaGGGGCCCAGGGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LPLKSCQSLPAQSETVAGVSIPA*GPRAGV
Trigger: GACCCCAGCCCTGGGCCCCCAGGCTGGGATAGACAC...GCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGCGGTGCAATCTCATTaGTGTCTATCCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: WKAASISEGTPLQSVALRAVQSH*CLSQPG
Trigger: CCCAGGCTGGGATAGACACCAATGAGATTGCACCGC...CCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434318.1
ENST00000437086.5
ENST00000627283.1
ENST00000629514.2
CDS-3UTR CCA 90 bp CCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGGCCTCACAGGCATCTaGCGGGGCGTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PHNRDTARTLQFPQSCHGGLTGI*RGVWLQ
Trigger: CTGGAGCCAGACGCCCCGCCAGATGCCTGTGAGGCC...ACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCCAGCGTCCACAGGGCTaGGCAGTCCCTGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LPLKSCQSLPAQSETVAGQRPQG*AVPASG
Trigger: GCCACTGGCAGGGACTGCCCAGCCCTGTGGACGCTG...GCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CATCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCAACCAAATGTGGCCCTaGGCATCCTCGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: HPGRQRRSQRAPLSSQWPNQMWP*ASSKAA
Trigger: CGCTGCCTTCGAGGATGCCCAGGGCCACATTTGGTT...GGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434318.1
ENST00000437086.5
ENST00000627283.1
ENST00000629514.2
CDS-3UTR CCA 90 bp CCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCATCCCCCTGGAAGAACCAAATGTaGCCCTGGGCATCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: PAWPSRQLSWWLYPTPSPWKNQM*PWASSK
Trigger: CTTCGAGGATGCCCAGGGCCACATTTGGTTCTTCCA...GGGGGATGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAACTACACGCCGGGTGCTaGGGTGGAAACGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: VYTPGAGVETPVVPASEELHAGC*GGNASS
Trigger: ACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAG...TTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp CATCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCCGGCAGTTGTCATGGTaGTTGTACCCCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: HPGRQRRSQRAPLSSQWPRQLSW*LYPTPS
Trigger: GGATGGGGTGGGGTACAACCACCATGACAACTGCCG...GGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CCA 90 bp GTGACCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACTCCCGGCAGTTGTCATaGTGGTTGTACCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: VTTTCVALPAVVMVVVPHSRQLS*WLYPTP
Trigger: TGGGGTGGGGTACAACCACCATGACAACTGCCGGGA...GTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGGCTGCACCAACTGCCATaGGAACCGAAGGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: EGSVDLRGHPSPVSGPAGLHQLP*EPKDPL
Trigger: AAGAGGATCCTTCGGTTCCCATGGCAGTTGGTGCAG...CCCCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CCA 90 bp GCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTCAGGCTGGACTGCCCTaGAACCCACGCAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: AGCWGGNASSPCLGRSRSQAGLP*NPRRFP
Trigger: GGGAAACCTGCGTGGGTTCCAGGGCAGTCCAGCCTG...AGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp GTGACCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACACATCCCCTTCTCGGTaGGTCTTGGGGAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VTTTCVALPAVVMVVVPHTSPSR*VLGKKA
Trigger: TGCCTTCTTCCCCAAGACTCACCGAGAAGGGGATGT...GTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp AGCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCACCCCATCCCCCTaGGGAGACATGGGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SQKADRCRHLPRPDLRKWPTPSP*GDMGSV
Trigger: GACTGAGCCCATGTCTCCTCAGGGGGATGGGGTGGG...CCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp CCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGCCCACCCCATCCCCCTaGGGAGACATGGGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: PFLLSHAKASLPSLRQSLPTPSP*GDMGSV
Trigger: GACTGAGCCCATGTCTCCTCAGGGGGATGGGGTGGG...CAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp GTTTGCCAGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCCTCCCTGCCCAGTCTaGGACAGTCGCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VCQDLHSGPKTALPLKSCPPCPV*DSRWQV
Trigger: CACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGG...GCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp TTCACCGTCGTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCAAGGGTGACAAATGCCTACTaGCCACTCCCTGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: FTVVHPVLSTCRRGKAARVTNAY*PLPGPL
Trigger: CAGGGGCCCAGGGAGTGGTCAGTAGGCATTTGTCAC...CCTTGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp AGGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCGGCAGGTCGTCCCCATaGCAGTACCTGGCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: RYVAASRAWGLLHEEYPSGRSSP*QYLAKS
Trigger: CGACTTCGCCAGGTACTGGCATGGGGACGACCTGCC...GGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GGTCAGAGGAAAGTGTTGGCAGGCTCGGCACAGCCAAAGAAGTCAGGACCCACGGCTGCTGTTGTGTGCTaGAGCCCCAGCACGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GQRKVLAGSAQPKKSGPTAAVVC*SPSTWP
Trigger: TGGCCACGTGCTGGGGCTGCAGCACACAACAGCAGC...CGTGGGTCCTGACTTCTTTGGCTGTGCCGAGCCTGCCAACACTTTCCTCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp GGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGGCTGCTGTTGTGTGCTaGAGCCCCAGCACGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GPRLPFLLSHAKASLPSLAAVVC*SPSTWP
Trigger: TGGCCACGTGCTGGGGCTGCAGCACACAACAGCAGC...CAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GCTTTTCACCGTCGTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCTTGGCTGCTGTTGTGTaGTGCAGCCCCAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: AFHRRTPSTEHLPEREGCLAAVV*CSPSTW
Trigger: CCACGTGCTGGGGCTGCAGCACACAACAGCAGCCAA...GCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTGAAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp TTCACCGTCGTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCAAGGTTGGCTGCTGTTGTGTaGTGCAGCCCCAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: FTVVHPVLSTCRRGKAARLAAVV*CSPSTW
Trigger: CCACGTGCTGGGGCTGCAGCACACAACAGCAGCCAA...CCTTGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp TTCACCGTCGTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCAAGGCATCAGGGCCTTGGCTaGTGTTGTGTGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: FTVVHPVLSTCRRGKAARHQGLG*CCVLQP
Trigger: GGGCTGCAGCACACAACAGCAGCCAAGGCCCTGATG...CCTTGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp TCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGGCACGGGACTGGTCTGGCTCCAGCGGTaGAATCTCATTGGTGTCTAT +
Preference number: 4 (lower is better)
Translates to: SISEGTPLQSVALRGTGLVWLQR*NLIGVY
Trigger: ATAGACACCAATGAGATTGCACCGCTGGAGCCAGAC...CAGTCCCGTGCCCCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434318.1
ENST00000437086.5
ENST00000627283.1
ENST00000629514.2
CDS-3UTR GCA 90 bp GCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTCTACACGCCGGGTaGTGGGGTGGAAACGCCAGT +
Preference number: 4 (lower is better)
Translates to: AGCWGGNASSPCLGRSRSCLHAG*WGGNAS
Trigger: ACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACA...AGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCCCAGTCCTGCCATGGTaGTACCCTGAGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPPVLPW*YPEGQG
Trigger: TCCCTGTCCCTCAGGGTAGCACCATGGCAGGACTGG...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACGGGCCCCAGCACCCTTaGTTCAGTGCCAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLQCQPLEGTSQQGYSKDGPQHP*FSASPW
Trigger: CCAGGGGCTGGCACTGAAGCAAGGGTGCTGGGGCCC...GTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCGCCCTACAGCCCAGTTaGTCAGCCAGGGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: ARRQTDAGTYQDLTSGSGALQPS*SARAEG
Trigger: GCCTTCAGCCCTGGCTGAGCAACTGGGCTGTAGGGC...GCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp AGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGCTCAGGAAGTGGCCCTaGCCTACAGCCCAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: SGPKTALPLKSCQSLPAQLRKWP*PTAQLL
Trigger: GAGCAACTGGGCTGTAGGGCAGGGCCACTTCCTGAG...CTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp AGATGGCCATGGGTCTCTAGCCTGATATTCGTGGCCTGGCAGGGGTCAGCACCCGGGCCTGGGGTCTCCTaGATGAAGAATACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RWPWVSSLIFVAWQGSAPGPGVS*MKNTPP
Trigger: GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCC...GGGTGCTGACCCCTGCCAGGCCACGAATATCAGGCTAGAGACCCATGGCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CTGCCATGCCCCGCCACTGTGGACCTGCTTGACCCCTACCACAGACTCTCCCAGCCCTGGCATCTGCAATaGTCCAGGCTCTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: LPCPATVDLLDPYHRLSQPWHLQ*SRLSSL
Trigger: CAGAGATGAGAGCCTGGAGCATTGCAGATGCCAGGG...CTGGGAGAGTCTGTGGTAGGGGTCAAGCAGGTCCACAGTGGCGGGGCATGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp GTAAAGGTGAGTGGCGTCACATCGCTCCATACCTTTAGGGCCTCTGCCATCGTCCAGGTGCCGGGCTACTaGGCAGGGCTGCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: VKVSGVTSLHTFRASAIVQVPGY*AGLHAR
Trigger: CCTGGCATGCAGCCCTGCCCAGTAGCCCGGCACCTG...GACGATGGCAGAGGCCCTAAAGGTATGGAGCGATGTGACGCCACTCACCTTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR CCA 90 bp CATGGGAACCGAAGGATCCCACGGACACACAGGTGGCATCCTAGTGTCCTGCTCACTCAGCCCATCAGATaGGTCGGGCACGCCACAGCG +
Preference number: 4 (lower is better)
Translates to: HGNRRIPRTHRWHPSVLLTQPIR*VGHATA
Trigger: CGCTGTGGCGTGCCCGACCCATCTGATGGGCTGAGT...GAGCAGGACACTAGGATGCCACCTGTGTGTCCGTGGGATCCTTCGGTTCCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR CCA 90 bp GGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGACTCAGCCCATCAGATaGGTCGGGCACGCCACAGCG +
Preference number: 4 (lower is better)
Translates to: GPRLPFLLSHAKASLPSLTQPIR*VGHATA
Trigger: CGCTGTGGCGTGCCCGACCCATCTGATGGGCTGAGT...CAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCTGCAGCCCCAGCACGTaGCCAAATTCATGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPCSPST*PNSWAA
Trigger: GGCAGCCCATGAATTTGGCCACGTGCTGGGGCTGCA...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GAGCCTTCACCTTCACAGGGTCAAACTTCCAGTAGAGGCGGCCGCGCAGGAAGTATCTGGCGGGGCGTCTaGCTCCAGCGGTGCAATCTC +
Preference number: 4 (lower is better)
Translates to: EPSPSQGQTSSRGGRAGSIWRGV*LQRCNL
Trigger: GAGATTGCACCGCTGGAGCCAGACGCCCCGCCAGAT...ACTTCCTGCGCGGCCGCCTCTACTGGAAGTTTGACCCTGTGAAGGTGAAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CCA 90 bp GATCTTGTTCTTCTCGGGACCCCAGACCAAGGCAGCATGGACCGGGAACCTCACATCTGGCGGGGCGTCTaGCTCCAGCGGTGCAATCTC +
Preference number: 4 (lower is better)
Translates to: DLVLLGTPDQGSMDREPHIWRGV*LQRCNL
Trigger: GAGATTGCACCGCTGGAGCCAGACGCCCCGCCAGAT...GTGAGGTTCCCGGTCCATGCTGCCTTGGTCTGGGGTCCCGAGAAGAACAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp GCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCAGGAGGATCCGGCCTGGGAATCTGGCGGGGCGTCTaGCTCCAGCGGTGCAATCTC +
Preference number: 4 (lower is better)
Translates to: ALEDSSAAKRASGGSGLGIWRGV*LQRCNL
Trigger: GAGATTGCACCGCTGGAGCCAGACGCCCCGCCAGAT...TCCCAGGCCGGATCCTCCTGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCAGGAGGATCCGGCCTGGGAGCTCGCCTCGGATGGTaGAGACCGCGTCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: ALEDSSAAKRASGGSGLGARLGW*RPRQRR
Trigger: CCTCCTTTGACGCGGTCTCCACCATCCGAGGCGAGC...TCCCAGGCCGGATCCTCCTGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGGCTCGCCTCGGATGGTaGAGACCGCGTCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GPRLPFLLSHAKASLPSLARLGW*RPRQRR
Trigger: CCTCCTTTGACGCGGTCTCCACCATCCGAGGCGAGC...CAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCAGCGAGAGGCCAATGCTaGGTAGCCGGGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QCQPLEGTSQQGYSKDTPARGQC*VAGLQL
Trigger: CAGCTGCAGCCCGGCTACCCAGCATTGGCCTCTCGC...TGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCGCGAGAGGCCAATGCTaGGTAGCCGGGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCARGQC*VAGLQL
Trigger: CAGCTGCAGCCCGGCTACCCAGCATTGGCCTCTCGC...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCGGCAGTCCCTGCCAGTaGCGAGAGGCCAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPWKEPHNRDTARTLQFPGSPCQ*REANAG
Trigger: CCCAGCATTGGCCTCTCGCCACTGGCAGGGACTGCC...GGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCATGGAAGAACCAAATGTaGCCCTGGGCATCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPWKNQM*PWASSK
Trigger: CTTCGAGGATGCCCAGGGCCACATTTGGTTCTTCCA...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TTCACCGTCGTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCAAGGCAGACCAAGGCAGCATaGACCGGGAACCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: FTVVHPVLSTCRRGKAARQTKAA*TGNLTR
Trigger: CCTGGTGAGGTTCCCGGTCCATGCTGCCTTGGTCTG...CCTTGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCCTGATATTCGTGGCCTaGCAGGGGTCAGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPLIFVA*QGSAPL
Trigger: CAGGGGTGCTGACCCCTGCCAGGCCACGAATATCAG...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GTGACCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCACAGCCACAAAGATaGCCATGGGTCTCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: VTTTCVALPAVVMVVVPHPQPQR*PWVSSL
Trigger: CAGGCTAGAGACCCATGGCCATCTTTGTGGCTGTGG...GTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp ATCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCTCAGTCCCATGCCTaGTGCCCACAGCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: ILEGSVDLRGHPSPVSGPAQSHA*CPQPQR
Trigger: TCTTTGTGGCTGTGGGCACCAGGCATGGGACTGAGC...AGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CCA 90 bp ACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCTACCCCCCCCTGAGGAGACATaGGCTCAGTCCCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: TGIQQGHSSSPSPAMVLPPPEET*AQSHAW
Trigger: CCAGGCATGGGACTGAGCCCATGTCTCCTCAGGGGG...GGGTAGCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGT
61% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GTGACCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCAGGAGGATCCGGCCTaGGACAGGATTGAGGTATGT +
Preference number: 4 (lower is better)
Translates to: VTTTCVALPAVVMVVVPHQEDPA*DRIEVC
Trigger: ACATACCTCAATCCTGTCCCAGGCCGGATCCTCCTG...GTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCAGGAGGATCCGGCCTaGGACAGGATTGAGGTATGT +
Preference number: 4 (lower is better)
Translates to: SWKAASISEGTPLQSVALQEDPA*DRIEVC
Trigger: ACATACCTCAATCCTGTCCCAGGCCGGATCCTCCTG...CAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CCA 90 bp TCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGGCACGGGACTGGGAAATCCCAGCTCTTaGAAGAACCAAATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SISEGTPLQSVALRGTGLGNPSS*KNQMWP
Trigger: GGGCCACATTTGGTTCTTCCAAGAGCTGGGATTTCC...CAGTCCCGTGCCCCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp GATCTTGTTCTTCTCGGGACCCCAGACCAAGGCAGCATGGACCGGGAACCTCACCATGCCCCGCCACTGTaGACCTGCTTGACCCCTACC +
Preference number: 4 (lower is better)
Translates to: DLVLLGTPDQGSMDREPHHAPPL*TCLTPT
Trigger: GGTAGGGGTCAAGCAGGTCCACAGTGGCGGGGCATG...GTGAGGTTCCCGGTCCATGCTGCCTTGGTCTGGGGTCCCGAGAAGAACAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp GAGGGCTGCCTGGGCGGCTGCTCCTTCCACTGGCATTTGGCTGTGACAAATGCCTGCAGTCATCTGGGCTaGGACTCAGTGGGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: EGCLGGCSFHWHLAVTNACSHLG*DSVGSE
Trigger: TTCGCTACCCACTGAGTCTCAGCCCAGATGACTGCA...GGCATTTGTCACAGCCAAATGCCAGTGGAAGGAGCAGCCGCCCAGGCAGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp AAGTCAGGACCCACGAGACGGGGGAAGCCTTCCAGAGCCTTCACCTTCACAGGGCATGGGTCTCTAGCCTaGTATTCGTGGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KSGPTRRGKPSRAFTFTGHGSLA*YSWPGR
Trigger: CCTGCCAGGCCACGAATATCAGGCTAGAGACCCATG...CCCTGTGAAGGTGAAGGCTCTGGAAGGCTTCCCCCGTCTCGTGGGTCCTGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR TCA 90 bp TTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACCCCACCCCATCCCCCTaGGGAGACATGGGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LLQCQPLEGTSQQGYSKDPTPSP*GDMGSV
Trigger: GACTGAGCCCATGTCTCCTCAGGGGGATGGGGTGGG...GTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp ACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCTACCCGCCATGGTGCTACCCTaGGGGACAGGGATGGAGACA +
Preference number: 4 (lower is better)
Translates to: TGIQQGHSSSPSPAMVLPAMVLP*GTGMET
Trigger: TGTCTCCATCCCTGTCCCTCAGGGTAGCACCATGGC...GGGTAGCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp TGCGGGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCTGTGCCTTCATTTGTaGAGTCCCTGGCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: CGARDCLHAGCWGGNASSLCLHL*SPWHLQ
Trigger: TTGCAGATGCCAGGGACTTCACAAATGAAGGCACAG...ACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp CATCGCTCCATACCTTTAGGGCCTCTGCCATCGTCTGCCGCACCTGCTCCTGCAACCTCTTCTGTCGGTTaGGGGCACTCAGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: HRSIPLGPLPSSAAPAPATSSVG*GHSAHQ
Trigger: CTGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGT...TGCAGGAGCAGGTGCGGCAGACGATGGCAGAGGCCCTAAAGGTATGGAGCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR GCA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCACCTCTTCTGTCGGTTaGGGGCACTCAGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPTSSVG*GHSAHQ
Trigger: CTGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGT...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR GCA 90 bp AGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGATCGTCTGCCGCACCTaGTCCTGCACCAACTGCCAT +
Preference number: 4 (lower is better)
Translates to: SGPKTALPLKSCQSLPAQIVCRT*SCTNCH
Trigger: ATGGCAGTTGGTGCAGGAGCAGGTGCGGCAGACGAT...CTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GTTTGCCAGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCGGCAGGTCGTCCCCATaGCAGTACCTGGCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: VCQDLHSGPKTALPLKSCGRSSP*QYLAKS
Trigger: CGACTTCGCCAGGTACTGGCATGGGGACGACCTGCC...GCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCAGCTGCTGTTGTGTGCTaGAGCCCCAGCACGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QCQPLEGTSQQGYSKDTPAAVVC*SPSTWP
Trigger: TGGCCACGTGCTGGGGCTGCAGCACACAACAGCAGC...TGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp AAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTGCCATCAGGGCCTTGGCTaGTGTTGTGTGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KADRCRHLPRPDLRKWPCHQGLG*CCVLQP
Trigger: GGGCTGCAGCACACAACAGCAGCCAAGGCCCTGATG...GCAGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TGCGGGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTAACGCCAGTAGTCCCTaGCTCGGAAGAAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: CGARDCLHAGCWGGNASSNASSP*LGRSRS
Trigger: AGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTT...ACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp AGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGAGGTTTGCCAGGACCTaGATAGCGGGCCCAAGACTG +
Preference number: 4 (lower is better)
Translates to: SGPKTALPLKSCQSLPAQRFART*IAGPRL
Trigger: CAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAACCT...CTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GTTTGCCAGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAGGGCAGCCAGGTTTaGCAGGACCTGCATAGCGGG +
Preference number: 4 (lower is better)
Translates to: VCQDLHSGPKTALPLKSCQGSQV*QDLHSG
Trigger: CCCGCTATGCAGGTCCTGGCAAACCTGGCTGCCCTG...GCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCACAGGGCAGCCAGGTTTaGCAGGACCTGCATAGCGGG +
Preference number: 4 (lower is better)
Translates to: QCQPLEGTSQQGYSKDTPQGSQV*QDLHSG
Trigger: CCCGCTATGCAGGTCCTGGCAAACCTGGCTGCCCTG...TGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CCTTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGGCCCTACAGCCCAGTTaGTCAGCCAGGGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: PCFSASPWKEPHNRDTARALQPS*SARAEG
Trigger: GCCTTCAGCCCTGGCTGAGCAACTGGGCTGTAGGGC...CCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TCCATACCTTTAGGGCCTCTGCCATCGTCTGCCGCACCTGCTCCTGCACCAACTGGCATCCTAGTGTCCTaGTCCCAGGCCCCTACCTGT +
Preference number: 4 (lower is better)
Translates to: SIPLGPLPSSAAPAPAPTGILVS*SQAPTC
Trigger: ACAGGTAGGGGCCTGGGAGCAGGACACTAGGATGCC...AGTTGGTGCAGGAGCAGGTGCGGCAGACGATGGCAGAGGCCCTAAAGGTATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR GCA 90 bp TGCGGGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCAGGCTCTCATCTCTaGCAGTTGAGGATGGAAATC +
Preference number: 4 (lower is better)
Translates to: CGARDCLHAGCWGGNASSPGSHL*QLRMEI
Trigger: GATTTCCATCCTCAACTGGCAGAGATGAGAGCCTGG...ACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp TCAGTAAAGGTGAGTGGCGTCACATCGCTCCATACCTTTAGGGCCTCTGCCATCCTCTCGGCATGGAGGTaGTGGGCGTCCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: SVKVSGVTSLHTFRASAILSAWR*WASGGR
Trigger: TCTGCCGCCGGACGCCCACCACCTCCATGCCGAGAG...GATGGCAGAGGCCCTAAAGGTATGGAGCGATGTGACGCCACTCACCTTTACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR CCA 90 bp CCTTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACTCAGCCCATCAGATaGGTCGGGCACGCCACAGCG +
Preference number: 4 (lower is better)
Translates to: PCFSASPWKEPHNRDTARTQPIR*VGHATA
Trigger: CGCTGTGGCGTGCCCGACCCATCTGATGGGCTGAGT...CCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCTGCAGCCCCAGCACGTaGCCAAATTCATGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ARRQTDAGTYQDLTSGSGCSPST*PNSWAA
Trigger: GGCAGCCCATGAATTTGGCCACGTGCTGGGGCTGCA...GCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TTCACCGTCGTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCAAGGCGGACATCAGGGCCTTaGCTGCTGTTGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: FTVVHPVLSTCRRGKAARRTSGP*LLLCAA
Trigger: TGCAGCACACAACAGCAGCCAAGGCCCTGATGTCCG...CCTTGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp AAGTCAGGACCCACGAGACGGGGGAAGCCTTCCAGAGCCTTCACCTTCACAGGGCGGACATCAGGGCCTTaGCTGCTGTTGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KSGPTRRGKPSRAFTFTGRTSGP*LLLCAA
Trigger: TGCAGCACACAACAGCAGCCAAGGCCCTGATGTCCG...CCCTGTGAAGGTGAAGGCTCTGGAAGGCTTCCCCCGTCTCGTGGGTCCTGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CCA 90 bp CAGCCAAAGAAGTCAGGACCCACGAGACGGGGGAAGCCTTCCAGAGCCTTCACCGCCCCTGCAGTCATCTaGGCTGAGACTCAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: QPKKSGPTRRGKPSRAFTAPAVI*AETQWV
Trigger: TACCCACTGAGTCTCAGCCCAGATGACTGCAGGGGC...GGTGAAGGCTCTGGAAGGCTTCCCCCGTCTCGTGGGTCCTGACTTCTTTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CCA 90 bp AGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCAGGTGACCACGCCCCTGCAGTCATCTaGGCTGAGACTCAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: SHAKASLPSLRQSLAGDHAPAVI*AETQWV
Trigger: TACCCACTGAGTCTCAGCCCAGATGACTGCAGGGGC...GTGGTCACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGATCTGGCGGGGCGTCTaGCTCCAGCGGTGCAATCTC +
Preference number: 4 (lower is better)
Translates to: SQKADRCRHLPRPDLRKWIWRGV*LQRCNL
Trigger: GAGATTGCACCGCTGGAGCCAGACGCCCCGCCAGAT...CCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGATCTGGCGGGGCGTCTaGCTCCAGCGGTGCAATCTC +
Preference number: 4 (lower is better)
Translates to: PFLLSHAKASLPSLRQSLIWRGV*LQRCNL
Trigger: GAGATTGCACCGCTGGAGCCAGACGCCCCGCCAGAT...CAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCGCTCGCCTCGGATGGTaGAGACCGCGTCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: DLHSGPKTALPLKSCQSLARLGW*RPRQRR
Trigger: CCTCCTTTGACGCGGTCTCCACCATCCGAGGCGAGC...GAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCAGAGCTCGCCTCGGATaGTGGAGACCGCGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: ARRQTDAGTYQDLTSGSGRARLG*WRPRQR
Trigger: CCTTTGACGCGGTCTCCACCATCCGAGGCGAGCTCT...GCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp ACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCTACCCCTGATATTCGTGGCCTaGCAGGGGTCAGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: TGIQQGHSSSPSPAMVLPLIFVA*QGSAPL
Trigger: CAGGGGTGCTGACCCCTGCCAGGCCACGAATATCAG...GGGTAGCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCCCCCCTGAGGAGACATaGGCTCAGTCCCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCPPEET*AQSHAW
Trigger: CCAGGCATGGGACTGAGCCCATGTCTCCTCAGGGGG...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCCCCCTGAGGAGACATaGGCTCAGTCCCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPWKEPHNRDTARTLQFPPPEET*AQSHAW
Trigger: CCAGGCATGGGACTGAGCCCATGTCTCCTCAGGGGG...GGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCT
60% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CAGCCAAAGAAGTCAGGACCCACGAGACGGGGGAAGCCTTCCAGAGCCTTCACCTCCCGGCAGTTGTCATaGTGGTTGTACCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: QPKKSGPTRRGKPSRAFTSRQLS*WLYPTP
Trigger: TGGGGTGGGGTACAACCACCATGACAACTGCCGGGA...GGTGAAGGCTCTGGAAGGCTTCCCCCGTCTCGTGGGTCCTGACTTCTTTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CCA 90 bp GGGACTGTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGGAAATCCCAGCTCTTaGAAGAACCAAATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GTVYTPGAGVETPVVPASGNPSS*KNQMWP
Trigger: GGGCCACATTTGGTTCTTCCAAGAGCTGGGATTTCC...CGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp GAGCCTTCACCTTCACAGGGTCAAACTTCCAGTAGAGGCGGCCGCGCAGGAAGTTGGCGAAGTCGATCATaGTGTCAGCACGGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: EPSPSQGQTSSRGGRAGSWRSRS*CQHGPR
Trigger: ACGAGGGCCGTGCTGACATCATGATCGACTTCGCCA...ACTTCCTGCGCGGCCGCCTCTACTGGAAGTTTGACCCTGTGAAGGTGAAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR TCA 90 bp AGGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCTGGCGAAGTCGATCATaGTGTCAGCACGGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: RYVAASRAWGLLHEEYPSWRSRS*CQHGPR
Trigger: ACGAGGGCCGTGCTGACATCATGATCGACTTCGCCA...GGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCACATCCCCTTCTCGGTaGGTCTTGGGGAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPTSPSR*VLGKKA
Trigger: TGCCTTCTTCCCCAAGACTCACCGAGAAGGGGATGT...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp AGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTGCAGTCATCTGGGCTaGGACTCAGTGGGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: SGPKTALPLKSCQSLPAQCSHLG*DSVGSE
Trigger: TTCGCTACCCACTGAGTCTCAGCCCAGATGACTGCA...CTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp CACCGTCGTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCAAGGACTGGCCATATAGGTGTTaGACGCCCCTGCAGTCATCT +
Preference number: 4 (lower is better)
Translates to: HRRTPSTEHLPEREGCKDWPYRC*TPLQSS
Trigger: AGATGACTGCAGGGGCGTTCAACACCTATATGGCCA...GTCCTTGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp AAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTGCGGCCTGGGACAGGATTaGGGTATGTTGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KADRCRHLPRPDLRKWPCGLGQD*GMLQPP
Trigger: TGGAGGCTGCAACATACCTCAATCCTGTCCCAGGCC...GCAGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp TGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGATAAGCTGGGGCAGTaGATGCTCTGTAAACTAGTG +
Preference number: 4 (lower is better)
Translates to: WKAASISEGTPLQSVALRDKLGQ*MLCKLV
Trigger: CACTAGTTTACAGAGCATTCACTGCCCCAGCTTATC...CCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp GCAGAGGGAAGCGGGAGGCCTGGGATAAGCTGGGGCAGTGAATGCTCTGTAAACCACTGTGGACCTGCTTaGCCCCTACCACAGACTCTC +
Preference number: 4 (lower is better)
Translates to: AEGSGRPGISWGSECSVNHCGPA*PLPQTL
Trigger: GAGAGTCTGTGGTAGGGGTCAAGCAGGTCCACAGTG...GTTTACAGAGCATTCACTGCCCCAGCTTATCCCAGGCCTCCCGCTTCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp TGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGGCTACTGGGCAGGGCTaGATGCCAGGGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: WPGFWRTDFQDCQPEGRQATGQG*MPGLWP
Trigger: GGGCCACAGCCCTGGCATGCAGCCCTGCCCAGTAGC...CTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GTCACATCGCTCCATACCTTTAGGGCCTCTGCCATCGTCTGCCGCACCTGCTCCTGCTCCTGCACCAACTaGCATGGGAACCGAAGGATC +
Preference number: 4 (lower is better)
Translates to: VTSLHTFRASAIVCRTCSCSCTN*HGNRRI
Trigger: GATCCTTCGGTTCCCATGGCAGTTGGTGCAGGAGCA...GGAGCAGGTGCGGCAGACGATGGCAGAGGCCCTAAAGGTATGGAGCGATGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR GCA 90 bp AGATGGCCATGGGTCTCTAGCCTGATATTCGTGGCCTGGCAGGGGTCAGCACCCTGCTCCTGCACCAACTaGCATGGGAACCGAAGGATC +
Preference number: 4 (lower is better)
Translates to: RWPWVSSLIFVAWQGSAPCSCTN*HGNRRI
Trigger: GATCCTTCGGTTCCCATGGCAGTTGGTGCAGGAGCA...GGGTGCTGACCCCTGCCAGGCCACGAATATCAGGCTAGAGACCCATGGCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GGTCAGAGGAAAGTGTTGGCAGGCTCGGCACAGCCAAAGAAGTCAGGACCCACGATCGTCTGCCGCACCTaGTCCTGCACCAACTGCCAT +
Preference number: 4 (lower is better)
Translates to: GQRKVLAGSAQPKKSGPTIVCRT*SCTNCH
Trigger: ATGGCAGTTGGTGCAGGAGCAGGTGCGGCAGACGAT...CGTGGGTCCTGACTTCTTTGGCTGTGCCGAGCCTGCCAACACTTTCCTCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp TTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCGCTGCTGTTGTGTGCTaGAGCCCCAGCACGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FSASPWKEPHNRDTARTLAAVVC*SPSTWP
Trigger: TGGCCACGTGCTGGGGCTGCAGCACACAACAGCAGC...GAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp AGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTTGGCTGCTGTTGTGTaGTGCAGCCCCAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: RTCIAGPRLPFLLSHAKALAAVV*CSPSTW
Trigger: CCACGTGCTGGGGCTGCAGCACACAACAGCAGCCAA...GGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCATCAGGGCCTTGGCTaGTGTTGTGTGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: DLHSGPKTALPLKSCQSLHQGLG*CCVLQP
Trigger: GGGCTGCAGCACACAACAGCAGCCAAGGCCCTGATG...GAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTCGGGACCCCAGACCAAGGCAGTGTCTACACGCCGGGTaGTGGGGTGGAAACGCCAGT +
Preference number: 4 (lower is better)
Translates to: PCLGRSRSCSSRDPRPRQCLHAG*WGGNAS
Trigger: ACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACA...CTGCCTTGGTCTGGGGTCCCGAGAAGAACAAGATCTACTTCTTCCGAGGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp AACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTCGGGACCCCTCCAGTCAGTGGCCCTaGGGGGCACGGGACTGTCTA +
Preference number: 4 (lower is better)
Translates to: NASSPCLGRSRSCSSRDPSSQWP*GARDCL
Trigger: TAGACAGTCCCGTGCCCCGCAGGGCCACTGACTGGA...GGGGTCCCGAGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp TTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACTCCAGTCAGTGGCCCTaGGGGGCACGGGACTGTCTA +
Preference number: 4 (lower is better)
Translates to: LLQCQPLEGTSQQGYSKDSSQWP*GARDCL
Trigger: TAGACAGTCCCGTGCCCCGCAGGGCCACTGACTGGA...GTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCAGTCCTGCCATGGTaGTACCCTGAGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: DLHSGPKTALPLKSCQSLPVLPW*YPEGQG
Trigger: TCCCTGTCCCTCAGGGTAGCACCATGGCAGGACTGG...GAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp AGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCCCAGTCCTGCCATGGTaGTACCCTGAGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: RTCIAGPRLPFLLSHAKAPVLPW*YPEGQG
Trigger: TCCCTGTCCCTCAGGGTAGCACCATGGCAGGACTGG...GGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCCAGTTCCCCCAGTCCTaGCATGGTGCTACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCQFPQS*HGATLR
Trigger: CCTCAGGGTAGCACCATGGCAGGACTGGGGGAACTG...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp AGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTGCACCCTTGCTTCAGTaGCAGCCCCTGGAAGGAACC +
Preference number: 4 (lower is better)
Translates to: RRQTDAGTYQDLTSGSGPAPLLQ*QPLEGT
Trigger: GGTTCCTTCCAGGGGCTGGCACTGAAGCAAGGGTGC...AGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp AGCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGGCACCCTTGCTTCAGTaGCAGCCCCTGGAAGGAACC +
Preference number: 4 (lower is better)
Translates to: SQKADRCRHLPRPDLRKWAPLLQ*QPLEGT
Trigger: GGTTCCTTCCAGGGGCTGGCACTGAAGCAAGGGTGC...CCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCAGCACCCTTGCTTCAGTaGCAGCCCCTGGAAGGAACC +
Preference number: 4 (lower is better)
Translates to: QCQPLEGTSQQGYSKDTPAPLLQ*QPLEGT
Trigger: GGTTCCTTCCAGGGGCTGGCACTGAAGCAAGGGTGC...TGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACGCCCTACAGCCCAGTTaGTCAGCCAGGGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: LLQCQPLEGTSQQGYSKDALQPS*SARAEG
Trigger: GCCTTCAGCCCTGGCTGAGCAACTGGGCTGTAGGGC...GTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGCTCAGGAAGTGGCCCTaGCCTACAGCCCAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PFLLSHAKASLPSLRQSLLRKWP*PTAQLL
Trigger: GAGCAACTGGGCTGTAGGGCAGGGCCACTTCCTGAG...CAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGGGCCTGGGGTCTCCTaGATGAAGAATACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PHNRDTARTLQFPQSCHGGPGVS*MKNTPP
Trigger: GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCC...ACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCGGGCCTGGGGTCTCCTaGATGAAGAATACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LPLKSCQSLPAQSETVAGGPGVS*MKNTPP
Trigger: GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCC...GCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GAGCCTTCACCTTCACAGGGTCAAACTTCCAGTAGAGGCGGCCGCGCAGGAAGTTCCTCTTCTGTCGGTTaGGGGCACTCAGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: EPSPSQGQTSSRGGRAGSSSSVG*GHSAHQ
Trigger: CTGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGA...ACTTCCTGCGCGGCCGCCTCTACTGGAAGTTTGACCCTGTGAAGGTGAAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp AGGCCAATAATGCCTGCTCAGCACCCCACCCGCAGAGGGAAGCGGGAGGCCTGGCACGCAGGTTTCCCATaGTGTGCCTTCATTTGTGAA +
Preference number: 4 (lower is better)
Translates to: RPIMPAQHPTRRGKREAWHAGFP*CAFICE
Trigger: TTCACAAATGAAGGCACAGCATGGGAAACCTGCGTG...CCAGGCCTCCCGCTTCCCTCTGCGGGTGGGGTGCTGAGCAGGCATTATTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp CTGCCATGCCCCGCCACTGTGGACCTGCTTGACCCCTACCACAGACTCTCCCAGTTTGGCTGTGACAAATaGCTACTGACCACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LPCPATVDLLDPYHRLSQFGCDK*LLTTPW
Trigger: CCAGGGAGTGGTCAGTAGGCATTTGTCACAGCCAAA...CTGGGAGAGTCTGTGGTAGGGGTCAAGCAGGTCCACAGTGGCGGGGCATGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp AGGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCGGACATCAGGGCCTTaGCTGCTGTTGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RYVAASRAWGLLHEEYPSRTSGP*LLLCAA
Trigger: TGCAGCACACAACAGCAGCCAAGGCCCTGATGTCCG...GGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp ATGCAGGCCAATAATGCCTGCTCAGCACCCCACCCGCAGAGGGAAGCGGGAGGCTGGGCTGAGACTCAGTaGGTAGCGAAAGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: MQANNACSAPHPQREAGGWAETQ*VAKGVE
Trigger: TTCTACACCTTTCGCTACCCACTGAGTCTCAGCCCA...GCCTCCCGCTTCCCTCTGCGGGTGGGGTGCTGAGCAGGCATTATTGGCCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp TGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTGGCCTCACAGGCATCTaGCGGGGCGTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: WGGNASSPCLGRSRSCSSGLTGI*RGVWLQ
Trigger: CTGGAGCCAGACGCCCCGCCAGATGCCTGTGAGGCC...AGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp TTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACGCTCGCCTCGGATGGTaGAGACCGCGTCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLQCQPLEGTSQQGYSKDARLGW*RPRQRR
Trigger: CCTCCTTTGACGCGGTCTCCACCATCCGAGGCGAGC...GTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTCGGGGGCAGTCCCTGCCAGTaGCGAGAGGCCAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: VETPVVPASEEVDLVLLGGSPCQ*REANAG
Trigger: CCCAGCATTGGCCTCTCGCCACTGGCAGGGACTGCC...CCCGAGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp GATCTTGTTCTTCTCGGGACCCCAGACCAAGGCAGCATGGACCGGGAACCTCACAACCAAATGTGGCCCTaGGCATCCTCGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: DLVLLGTPDQGSMDREPHNQMWP*ASSKAA
Trigger: CGCTGCCTTCGAGGATGCCCAGGGCCACATTTGGTT...GTGAGGTTCCCGGTCCATGCTGCCTTGGTCTGGGGTCCCGAGAAGAACAAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp AGGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCAACCAAATGTGGCCCTaGGCATCCTCGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RYVAASRAWGLLHEEYPSNQMWP*ASSKAA
Trigger: CGCTGCCTTCGAGGATGCCCAGGGCCACATTTGGTT...GGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCCAGACCAAGGCAGCATaGACCGGGAACCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCQTKAA*TGNLTR
Trigger: CCTGGTGAGGTTCCCGGTCCATGCTGCCTTGGTCTG...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR CCA 90 bp CCTTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGCTACACGCCGGGTGCTaGGGTGGAAACGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: PCFSASPWKEPHNRDTARLHAGC*GGNASS
Trigger: ACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAG...CCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCCTGATATTCGTGGCCTaGCAGGGGTCAGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: RTCIAGPRLPFLLSHAKALIFVA*QGSAPL
Trigger: CAGGGGTGCTGACCCCTGCCAGGCCACGAATATCAG...GGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCTCCCGGCAGTTGTCATaGTGGTTGTACCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: ARRQTDAGTYQDLTSGSGSRQLS*WLYPTP
Trigger: TGGGGTGGGGTACAACCACCATGACAACTGCCGGGA...GCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCAGGTGACCACTTCAGTGCCAGCCCCTaGAAGGAACCTCACAACAGG +
Preference number: 4 (lower is better)
Translates to: SHAKASLPSLRQSLAGDHFSASP*KEPHNR
Trigger: CCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAA...GTGGTCACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp ACTGCCATGGGAACCGAAGGATCCCACGGACACACAGGTGGCATCCTAGTGTCCCCACGGACACACAGGTaGCATCCTAGTGTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TAMGTEGSHGHTGGILVSPRTHR*HPSVLL
Trigger: GAGCAGGACACTAGGATGCCACCTGTGTGTCCGTGG...GGACACTAGGATGCCACCTGTGTGTCCGTGGGATCCTTCGGTTCCCATGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR CCA 90 bp TCCTGCACCAACTGCCATGGGAACCGAAGGATCCCACGGACACACAGGTGGCATCTGCACCAACTGCCATaGGAACCGAAGGATCCCACG +
Preference number: 4 (lower is better)
Translates to: SCTNCHGNRRIPRTHRWHLHQLP*EPKDPT
Trigger: CGTGGGATCCTTCGGTTCCCATGGCAGTTGGTGCAG...ATGCCACCTGTGTGTCCGTGGGATCCTTCGGTTCCCATGGCAGTTGGTGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR TCA 90 bp GACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCGAAGGATCCTGTAGGTaGGGTCCGTCTTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: DLHSGPKTALPLKSCQSLEGSCR*GPSSPS
Trigger: GCTGGGAGAAGACGGACCTCACCTACAGGATCCTTC...GAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR TCA 90 bp CCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGAAGGATCCTGTAGGTaGGGTCCGTCTTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PFLLSHAKASLPSLRQSLEGSCR*GPSSPS
Trigger: GCTGGGAGAAGACGGACCTCACCTACAGGATCCTTC...CAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR TCA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCTGGCGAAGTCGATCATaGTGTCAGCACGGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCWRSRS*CQHGPR
Trigger: ACGAGGGCCGTGCTGACATCATGATCGACTTCGCCA...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp AAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTGCACATCCCCTTCTCGGTaGGTCTTGGGGAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KADRCRHLPRPDLRKWPCTSPSR*VLGKKA
Trigger: TGCCTTCTTCCCCAAGACTCACCGAGAAGGGGATGT...GCAGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp GCTTTTCACCGTCGTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCTGGCCATATAGGTGTTaGACGCCCCTGCAGTCATCT +
Preference number: 4 (lower is better)
Translates to: AFHRRTPSTEHLPEREGCWPYRC*TPLQSS
Trigger: AGATGACTGCAGGGGCGTTCAACACCTATATGGCCA...GCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTGAAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCTGGCCATATAGGTGTTaGACGCCCCTGCAGTCATCT +
Preference number: 4 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPWPYRC*TPLQSS
Trigger: AGATGACTGCAGGGGCGTTCAACACCTATATGGCCA...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp GTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAACACAAAGCCCGCTTTaGAGAAAAAGAGCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: VYTPGAGVETPVVPASEETQSPL*RKRARL
Trigger: GAGGCGAGCTCTTTTTCTTCAAAGCGGGCTTTGTGT...TTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCCATGGGTCTCTAGCCTaGTATTCGTGGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCHGSLA*YSWPGR
Trigger: CCTGCCAGGCCACGAATATCAGGCTAGAGACCCATG...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp TTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCGCCATGGTGCTACCCTaGGGGACAGGGATGGAGACA +
Preference number: 4 (lower is better)
Translates to: FSASPWKEPHNRDTARTLAMVLP*GTGMET
Trigger: TGTCTCCATCCCTGTCCCTCAGGGTAGCACCATGGC...GAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp CCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGGCCTGGGACAGGATTaGGGTATGTTGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PHNRDTARTLQFPQSCHGGLGQD*GMLQPP
Trigger: TGGAGGCTGCAACATACCTCAATCCTGTCCCAGGCC...ACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp AGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCGGCCTGGGACAGGATTaGGGTATGTTGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SPWKEPHNRDTARTLQFPGLGQD*GMLQPP
Trigger: TGGAGGCTGCAACATACCTCAATCCTGTCCCAGGCC...GGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp GAGGGCTGCCTGGGCGGCTGCTCCTTCCACTGGCATTTGGCTGTGACAAATGCCCTGTGCCTTCATTTGTaGAGTCCCTGGCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: EGCLGGCSFHWHLAVTNALCLHL*SPWHLQ
Trigger: TTGCAGATGCCAGGGACTTCACAAATGAAGGCACAG...GGCATTTGTCACAGCCAAATGCCAGTGGAAGGAGCAGCCGCCCAGGCAGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp ACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCTACCCTGCTCCTGCACCAACTaGCATGGGAACCGAAGGATC +
Preference number: 4 (lower is better)
Translates to: TGIQQGHSSSPSPAMVLPCSCTN*HGNRRI
Trigger: GATCCTTCGGTTCCCATGGCAGTTGGTGCAGGAGCA...GGGTAGCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCATCGTCTGCCGCACCTaGTCCTGCACCAACTGCCAT +
Preference number: 4 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCIVCRT*SCTNCH
Trigger: ATGGCAGTTGGTGCAGGAGCAGGTGCGGCAGACGAT...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp ACTGCCATGGGAACCGAAGGATCCCACGGACACACAGGTGGCATCCTAGTGTCCTCAGCACGGCCCTCGTaGACCTCAGTAAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: TAMGTEGSHGHTGGILVSSARPS*TSVKVS
Trigger: ACTCACCTTTACTGAGGTGCACGAGGGCCGTGCTGA...GGACACTAGGATGCCACCTGTGTGTCCGTGGGATCCTTCGGTTCCCATGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR GCA 90 bp AGGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCGCCAAATTCATGGGCTaGCACCTGCAGCAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: RYVAASRAWGLLHEEYPSAKFMG*HLQQVC
Trigger: ACAGACCTGCTGCAGGTGGCAGCCCATGAATTTGGC...GGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTCGCTGCTGTTGTGTGCTaGAGCCCCAGCACGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GVETPVVPASEEVDLVLLAAVVC*SPSTWP
Trigger: TGGCCACGTGCTGGGGCTGCAGCACACAACAGCAGC...GAGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp TTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACTTGGCTGCTGTTGTGTaGTGCAGCCCCAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: LLQCQPLEGTSQQGYSKDLAAVV*CSPSTW
Trigger: CCACGTGCTGGGGCTGCAGCACACAACAGCAGCCAA...GTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTCTGGCTCCAGCGGTaGAATCTCATTGGTGTCTAT +
Preference number: 4 (lower is better)
Translates to: VYTPGAGVETPVVPASEEVWLQR*NLIGVY
Trigger: ATAGACACCAATGAGATTGCACCGCTGGAGCCAGAC...TTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp TTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCTGTCTACACGCCGGGTaGTGGGGTGGAAACGCCAGT +
Preference number: 4 (lower is better)
Translates to: FSASPWKEPHNRDTARTLCLHAG*WGGNAS
Trigger: ACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACA...GAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACTGTCTACACGCCGGGTaGTGGGGTGGAAACGCCAGT +
Preference number: 4 (lower is better)
Translates to: LLQCQPLEGTSQQGYSKDCLHAG*WGGNAS
Trigger: ACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACA...GTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp AGATGGCCATGGGTCTCTAGCCTGATATTCGTGGCCTGGCAGGGGTCAGCACCCCTTCCTCTTAAGTCATaGCAAAGCCTCCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RWPWVSSLIFVAWQGSAPLPLKS*QSLPAQ
Trigger: CTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAG...GGGTGCTGACCCCTGCCAGGCCACGAATATCAGGCTAGAGACCCATGGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp AGCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGAGGTTTGCCAGGACCTaGATAGCGGGCCCAAGACTG +
Preference number: 4 (lower is better)
Translates to: SQKADRCRHLPRPDLRKWRFART*IAGPRL
Trigger: CAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAACCT...CCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCAGGTTTGCCAGGACCTaGATAGCGGGCCCAAGACTG +
Preference number: 4 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCRFART*IAGPRL
Trigger: CAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAACCT...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCAGGATTGAGGTATGTTaGAGCCTCCAGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCRIEVC*SLQGLG
Trigger: CCCCAGGCCCTGGAGGCTGCAACATACCTCAATCCT...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp AGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCTCTTCTGTCGGTTaGGGGCACTCAGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: RTCIAGPRLPFLLSHAKASSSVG*GHSAHQ
Trigger: CTGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGA...GGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp TGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTCCCTGCAGGCTGGACTaGCCTGGAACCCACGCAGGT +
Preference number: 4 (lower is better)
Translates to: WGGNASSPCLGRSRSCSSPCRLD*PGTHAG
Trigger: ACCTGCGTGGGTTCCAGGGCAGTCCAGCCTGCAGGG...AGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCACATCCGCCCCGGGGCTaGTGGGCTTGCTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PPHLTVNFLAWILENRFPHPPRG*WACWAA
Trigger: AGCGGCCCAGCAAGCCCAGCAGCCCCGGGGCGGATG...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000612388.3
CDS-3UTR CCA 90 bp AAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTGCCTTCTCGGTGAGTCTTaGGGAAGAAGGCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: KADRCRHLPRPDLRKWPCLLGES*GRRHGP
Trigger: TGGCCCATGCCTTCTTCCCCAAGACTCACCGAGAAG...GCAGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCAGCAGGTCTGTGCCCTaGTCATCCCCGATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: DLHSGPKTALPLKSCQSLSRSVP*SSPIVQ
Trigger: CTGGACTATCGGGGATGACCAGGGCACAGACCTGCT...GAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTAGCAGGTCTGTGCCCTaGTCATCCCCGATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PHNRDTARTLQFPQSCHGSRSVP*SSPIVQ
Trigger: CTGGACTATCGGGGATGACCAGGGCACAGACCTGCT...ACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCAAGCAGGTCTGTGCCCTaGTCATCCCCGATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QCQPLEGTSQQGYSKDTPSRSVP*SSPIVQ
Trigger: CTGGACTATCGGGGATGACCAGGGCACAGACCTGCT...TGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGCGGACATCAGGGCCTTaGCTGCTGTTGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PFLLSHAKASLPSLRQSLRTSGP*LLLCAA
Trigger: TGCAGCACACAACAGCAGCCAAGGCCCTGATGTCCG...CAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACAGAGCTCGCCTCGGATaGTGGAGACCGCGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LLQCQPLEGTSQQGYSKDRARLG*WRPRQR
Trigger: CCTTTGACGCGGTCTCCACCATCCGAGGCGAGCTCT...GTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGAGCGAGAGGCCAATGCTaGGTAGCCGGGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GLDSGEQISRIVSQKADRARGQC*VAGLQL
Trigger: CAGCTGCAGCCCGGCTACCCAGCATTGGCCTCTCGC...TCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCAACCAAATGTGGCCCTaGGCATCCTCGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCNQMWP*ASSKAA
Trigger: CGCTGCCTTCGAGGATGCCCAGGGCCACATTTGGTT...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GTTTGCCAGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCAACCAAATGTGGCCCTaGGCATCCTCGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: VCQDLHSGPKTALPLKSCNQMWP*ASSKAA
Trigger: CGCTGCCTTCGAGGATGCCCAGGGCCACATTTGGTT...GCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTGCCCACAGCCACAAAGATaGCCATGGGTCTCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: KADRCRHLPRPDLRKWPCPQPQR*PWVSSL
Trigger: CAGGCTAGAGACCCATGGCCATCTTTGTGGCTGTGG...GCAGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCTTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGGCTCAGTCCCATGCCTaGTGCCCACAGCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: PCFSASPWKEPHNRDTARAQSHA*CPQPQR
Trigger: TCTTTGTGGCTGTGGGCACCAGGCATGGGACTGAGC...CCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCGGCAGTTGTCATGGTaGTTGTACCCCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: SQKADRCRHLPRPDLRKWRQLSW*LYPTPS
Trigger: GGATGGGGTGGGGTACAACCACCATGACAACTGCCG...CCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCCGGCAGTTGTCATGGTaGTTGTACCCCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCRQLSW*LYPTPS
Trigger: GGATGGGGTGGGGTACAACCACCATGACAACTGCCG...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCATCCCGGCAGTTGTCATaGTGGTTGTACCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: QCQPLEGTSQQGYSKDTPSRQLS*WLYPTP
Trigger: TGGGGTGGGGTACAACCACCATGACAACTGCCGGGA...TGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCAGGAGGATCCGGCCTaGGACAGGATTGAGGTATGT +
Preference number: 4 (lower is better)
Translates to: ARRQTDAGTYQDLTSGSGQEDPA*DRIEVC
Trigger: ACATACCTCAATCCTGTCCCAGGCCGGATCCTCCTG...GCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp AGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCACATCCCCTTCTCGGTaGGTCTTGGGGAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SPWKEPHNRDTARTLQFPTSPSR*VLGKKA
Trigger: TGCCTTCTTCCCCAAGACTCACCGAGAAGGGGATGT...GGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp GACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCTGCAGTCATCTGGGCTaGGACTCAGTGGGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: DLHSGPKTALPLKSCQSLCSHLG*DSVGSE
Trigger: TTCGCTACCCACTGAGTCTCAGCCCAGATGACTGCA...GAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp CTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCTGCAGTCATCTGGGCTaGGACTCAGTGGGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: LPLKSCQSLPAQSETVAGCSHLG*DSVGSE
Trigger: TTCGCTACCCACTGAGTCTCAGCCCAGATGACTGCA...GCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp GGTCAGAGGAAAGTGTTGGCAGGCTCGGCACAGCCAAAGAAGTCAGGACCCACGTGGCCATATAGGTGTTaGACGCCCCTGCAGTCATCT +
Preference number: 4 (lower is better)
Translates to: GQRKVLAGSAQPKKSGPTWPYRC*TPLQSS
Trigger: AGATGACTGCAGGGGCGTTCAACACCTATATGGCCA...CGTGGGTCCTGACTTCTTTGGCTGTGCCGAGCCTGCCAACACTTTCCTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp CCTTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGTGCTCCTGCACCAACTaGCATGGGAACCGAAGGATC +
Preference number: 4 (lower is better)
Translates to: PCFSASPWKEPHNRDTARCSCTN*HGNRRI
Trigger: GATCCTTCGGTTCCCATGGCAGTTGGTGCAGGAGCA...CCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCTGCTCCTGCACCAACTaGCATGGGAACCGAAGGATC +
Preference number: 4 (lower is better)
Translates to: LPLKSCQSLPAQSETVAGCSCTN*HGNRRI
Trigger: GATCCTTCGGTTCCCATGGCAGTTGGTGCAGGAGCA...GCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp AGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCAGCACGGCCCTCGTaGACCTCAGTAAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: RTCIAGPRLPFLLSHAKASARPS*TSVKVS
Trigger: ACTCACCTTTACTGAGGTGCACGAGGGCCGTGCTGA...GGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGTCATGGGCTGCCACCTaGAGCAGGTCTGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WPGFWRTDFQDCQPEGRQSWAAT*SRSVPW
Trigger: CCAGGGCACAGACCTGCTGCAGGTGGCAGCCCATGA...CTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCCAAATTCATGGGCTaGCACCTGCAGCAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PFLLSHAKASLPSLRQSLAKFMG*HLQQVC
Trigger: ACAGACCTGCTGCAGGTGGCAGCCCATGAATTTGGC...CAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGATCCAGTCAGTGGCCCTaGGGGGCACGGGACTGTCTA +
Preference number: 4 (lower is better)
Translates to: GLDSGEQISRIVSQKADRSSQWP*GARDCL
Trigger: TAGACAGTCCCGTGCCCCGCAGGGCCACTGACTGGA...TCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCAGGAGGATCCGGCCTGGGACTTCCTCTTAAGTCATaGCAAAGCCTCCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: ALEDSSAAKRASGGSGLGLPLKS*QSLPAQ
Trigger: CTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAG...TCCCAGGCCGGATCCTCCTGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTCCAGGCTCTCATCTCTaGCAGTTGAGGATGGAAATC +
Preference number: 4 (lower is better)
Translates to: AGCWGGNASSPCLGRSRSPGSHL*QLRMEI
Trigger: GATTTCCATCCTCAACTGGCAGAGATGAGAGCCTGG...AGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp GAGGGCTGCCTGGGCGGCTGCTCCTTCCACTGGCATTTGGCTGTGACAAATGCCCACGCAGGTTTCCCATaGTGTGCCTTCATTTGTGAA +
Preference number: 4 (lower is better)
Translates to: EGCLGGCSFHWHLAVTNAHAGFP*CAFICE
Trigger: TTCACAAATGAAGGCACAGCATGGGAAACCTGCGTG...GGCATTTGTCACAGCCAAATGCCAGTGGAAGGAGCAGCCGCCCAGGCAGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCATCGGCATGGAGGTGGTaGGCGTCCGGCGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PPHLTVNFLAWILENRFPSAWRW*ASGGRA
Trigger: GGCTCTGCCGCCGGACGCCCACCACCTCCATGCCGA...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGAACTCAGCCCATCAGATaGGTCGGGCACGCCACAGCG +
Preference number: 4 (lower is better)
Translates to: GLDSGEQISRIVSQKADRTQPIR*VGHATA
Trigger: CGCTGTGGCGTGCCCGACCCATCTGATGGGCTGAGT...TCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCTTCTCGGTGAGTCTTaGGGAAGAAGGCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: SQKADRCRHLPRPDLRKWLLGES*GRRHGP
Trigger: TGGCCCATGCCTTCTTCCCCAAGACTCACCGAGAAG...CCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCAGGTGACCACTGGGCTGAGACTCAGTaGGTAGCGAAAGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: SHAKASLPSLRQSLAGDHWAETQ*VAKGVE
Trigger: TTCTACACCTTTCGCTACCCACTGAGTCTCAGCCCA...GTGGTCACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GCTTTTCACCGTCGTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCTGGGCTGAGACTCAGTaGGTAGCGAAAGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: AFHRRTPSTEHLPEREGCWAETQ*VAKGVE
Trigger: TTCTACACCTTTCGCTACCCACTGAGTCTCAGCCCA...GCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTGAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp AGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTGCGGTGCAATCTCATTaGTGTCTATCCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RRQTDAGTYQDLTSGSGPAVQSH*CLSQPG
Trigger: CCCAGGCTGGGATAGACACCAATGAGATTGCACCGC...AGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCGCGGTGCAATCTCATTaGTGTCTATCCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPWKEPHNRDTARTLQFPAVQSH*CLSQPG
Trigger: CCCAGGCTGGGATAGACACCAATGAGATTGCACCGC...GGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCGGTGCAATCTCATTaGTGTCTATCCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PFLLSHAKASLPSLRQSLAVQSH*CLSQPG
Trigger: CCCAGGCTGGGATAGACACCAATGAGATTGCACCGC...CAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GATCTTGTTCTTCTCGGGACCCCAGACCAAGGCAGCATGGACCGGGAACCTCACTGGAAGAACCAAATGTaGCCCTGGGCATCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: DLVLLGTPDQGSMDREPHWKNQM*PWASSK
Trigger: CTTCGAGGATGCCCAGGGCCACATTTGGTTCTTCCA...GTGAGGTTCCCGGTCCATGCTGCCTTGGTCTGGGGTCCCGAGAAGAACAAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp AGGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCAGGGCATCCAAGCCATaGTCAGAGGAAAGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: RYVAASRAWGLLHEEYPSRASKP*SEESVG
Trigger: GCCAACACTTTCCTCTGACCATGGCTTGGATGCCCT...GGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCGCTCAGTCCCATGCCTaGTGCCCACAGCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: FSASPWKEPHNRDTARTLAQSHA*CPQPQR
Trigger: TCTTTGTGGCTGTGGGCACCAGGCATGGGACTGAGC...GAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCTTCAGTGCCAGCCCCTaGAAGGAACCTCACAACAGG +
Preference number: 4 (lower is better)
Translates to: SPWKEPHNRDTARTLQFPFSASP*KEPHNR
Trigger: CCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAA...GGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGTTCAGTGCCAGCCCCTaGAAGGAACCTCACAACAGG +
Preference number: 4 (lower is better)
Translates to: PFLLSHAKASLPSLRQSLFSASP*KEPHNR
Trigger: CCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAA...CAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGTTTTGGCCTGGATTCTaGAGAACAGATTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: WKAASISEGTPLQSVALRFWPGF*RTDFQD
Trigger: ATCCTGGAAATCTGTTCTCCAGAATCCAGGCCAAAA...CCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CCA 90 bp AGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCCAGGAGGATCCGGCCTaGGACAGGATTGAGGTATGT +
Preference number: 4 (lower is better)
Translates to: RTCIAGPRLPFLLSHAKAQEDPA*DRIEVC
Trigger: ACATACCTCAATCCTGTCCCAGGCCGGATCCTCCTG...GGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCATTTACAATGGCTTTaGAGGATAGCAGTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: SWKAASISEGTPLQSVALHLQWL*RIAVLR
Trigger: TCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATG...CAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CCA 90 bp CCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCATCCCCCTACACACATTTACAATaGCTTTGGAGGATAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PAWPSRQLSWWLYPTPSPYTHLQ*LWRIAV
Trigger: CACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTA...GGGGGATGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp ACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCTACCCCTGCACCAACTGCCATaGGAACCGAAGGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: TGIQQGHSSSPSPAMVLPLHQLP*EPKDPL
Trigger: AAGAGGATCCTTCGGTTCCCATGGCAGTTGGTGCAG...GGGTAGCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR TCA 90 bp AGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTTGGCCATATAGGTGTTaGACGCCCCTGCAGTCATCT +
Preference number: 4 (lower is better)
Translates to: RRQTDAGTYQDLTSGSGPWPYRC*TPLQSS
Trigger: AGATGACTGCAGGGGCGTTCAACACCTATATGGCCA...AGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp AAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCTGCACACAAAGCCCGCTTTaGAGAAAAAGAGCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: KADRCRHLPRPDLRKWPCTQSPL*RKRARL
Trigger: GAGGCGAGCTCTTTTTCTTCAAAGCGGGCTTTGTGT...GCAGGGCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp TGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGGCCATGGTGCTACCCTaGGGGACAGGGATGGAGACA +
Preference number: 4 (lower is better)
Translates to: WPGFWRTDFQDCQPEGRQAMVLP*GTGMET
Trigger: TGTCTCCATCCCTGTCCCTCAGGGTAGCACCATGGC...CTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp GGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGAGCCATGGTGCTACCCTaGGGGACAGGGATGGAGACA +
Preference number: 4 (lower is better)
Translates to: GLDSGEQISRIVSQKADRAMVLP*GTGMET
Trigger: TGTCTCCATCCCTGTCCCTCAGGGTAGCACCATGGC...TCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TCAGTAAAGGTGAGTGGCGTCACATCGCTCCATACCTTTAGGGCCTCTGCCATCATCGTCTGCCGCACCTaGTCCTGCACCAACTGCCAT +
Preference number: 4 (lower is better)
Translates to: SVKVSGVTSLHTFRASAIIVCRT*SCTNCH
Trigger: ATGGCAGTTGGTGCAGGAGCAGGTGCGGCAGACGAT...GATGGCAGAGGCCCTAAAGGTATGGAGCGATGTGACGCCACTCACCTTTACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR GCA 90 bp TTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCTCAGCACGGCCCTCGTaGACCTCAGTAAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: FSASPWKEPHNRDTARTLSARPS*TSVKVS
Trigger: ACTCACCTTTACTGAGGTGCACGAGGGCCGTGCTGA...GAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGATGGCAGGTCGTCCCCATaGCAGTACCTGGCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: AWILENRFPGLSARRQTDGRSSP*QYLAKS
Trigger: CGACTTCGCCAGGTACTGGCATGGGGACGACCTGCC...ATCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp ACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCTACCCGTCTGGCTCCAGCGGTaGAATCTCATTGGTGTCTAT +
Preference number: 4 (lower is better)
Translates to: TGIQQGHSSSPSPAMVLPVWLQR*NLIGVY
Trigger: ATAGACACCAATGAGATTGCACCGCTGGAGCCAGAC...GGGTAGCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAACGCCAGTAGTCCCTaGCTCGGAAGAAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: GPRLPFLLSHAKASLPSLNASSP*LGRSRS
Trigger: AGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTT...CAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR GCA 90 bp GTTTGCCAGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCTTCCTCTTAAGTCATaGCAAAGCCTCCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VCQDLHSGPKTALPLKSCLPLKS*QSLPAQ
Trigger: CTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAG...GCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGCTTCCTCTTAAGTCATaGCAAAGCCTCCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PFLLSHAKASLPSLRQSLLPLKS*QSLPAQ
Trigger: CTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAG...CAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGCAGTTCCCCCAGTCCTaGCATGGTGCTACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: WPGFWRTDFQDCQPEGRQQFPQS*HGATLR
Trigger: CCTCAGGGTAGCACCATGGCAGGACTGGGGGAACTG...CTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGCTCAGTAAAGGTGAGTaGCGTCACATCGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: GPRLPFLLSHAKASLPSLLSKGE*RHIAPY
Trigger: GTATGGAGCGATGTGACGCCACTCACCTTTACTGAG...CAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCTCAGTAAAGGTGAGTaGCGTCACATCGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: ARRQTDAGTYQDLTSGSGLSKGE*RHIAPY
Trigger: GTATGGAGCGATGTGACGCCACTCACCTTTACTGAG...GCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GGTCAGAGGAAAGTGTTGGCAGGCTCGGCACAGCCAAAGAAGTCAGGACCCACGCTCAGTAAAGGTGAGTaGCGTCACATCGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: GQRKVLAGSAQPKKSGPTLSKGE*RHIAPY
Trigger: GTATGGAGCGATGTGACGCCACTCACCTTTACTGAG...CGTGGGTCCTGACTTCTTTGGCTGTGCCGAGCCTGCCAACACTTTCCTCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CCA 90 bp ACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCTACCCTGGGCTGAGACTCAGTaGGTAGCGAAAGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: TGIQQGHSSSPSPAMVLPWAETQ*VAKGVE
Trigger: TTCTACACCTTTCGCTACCCACTGAGTCTCAGCCCA...GGGTAGCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAGGCCTCACAGGCATCTaGCGGGGCGTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PPHLTVNFLAWILENRFPGLTGI*RGVWLQ
Trigger: CTGGAGCCAGACGCCCCGCCAGATGCCTGTGAGGCC...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCAGGCCTCACAGGCATCTaGCGGGGCGTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VHTFTMALEDSSAAKRASGLTGI*RGVWLQ
Trigger: CTGGAGCCAGACGCCCCGCCAGATGCCTGTGAGGCC...TGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GTTTGCCAGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCAGGGCATCCAAGCCATaGTCAGAGGAAAGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: VCQDLHSGPKTALPLKSCRASKP*SEESVG
Trigger: GCCAACACTTTCCTCTGACCATGGCTTGGATGCCCT...GCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCAGGGCATCCAAGCCATaGTCAGAGGAAAGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCRASKP*SEESVG
Trigger: GCCAACACTTTCCTCTGACCATGGCTTGGATGCCCT...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGCGGGTGAACTTTTTGGCCTaGATTCTGGAGAACAGATTT +
Preference number: 4 (lower is better)
Translates to: WKAASISEGTPLQSVALRVNFLA*ILENRF
Trigger: AAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCAC...CCGCAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CCA 90 bp CCTTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACGCCAGTAGTCCCTTaGAAGAACCAAATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PCFSASPWKEPHNRDTARTPVVP*KNQMWP
Trigger: GGGCCACATTTGGTTCTTCCAAGGGACTACTGGCGT...CCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR TCA 90 bp GTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTCGGGTGCAGTCATCTGGGCTaGGACTCAGTGGGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: VETPVVPASEEVDLVLLGCSHLG*DSVGSE
Trigger: TTCGCTACCCACTGAGTCTCAGCCCAGATGACTGCA...CCCGAGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp TGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGCATGGGTCTCTAGCCTaGTATTCGTGGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: WPGFWRTDFQDCQPEGRQHGSLA*YSWPGR
Trigger: CCTGCCAGGCCACGAATATCAGGCTAGAGACCCATG...CTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGAACCTCTTCTGTCGGTTaGGGGCACTCAGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: GLDSGEQISRIVSQKADRTSSVG*GHSAHQ
Trigger: CTGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGT...TCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR GCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAGCCTCTGCCATCGTCTaGCGCACCTGCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: PPHLTVNFLAWILENRFPASAIV*RTCSCT
Trigger: GGTGCAGGAGCAGGTGCGGCAGACGATGGCAGAGGC...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGATCATCAGGGCCTTGGCTaGTGTTGTGTGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: AWILENRFPGLSARRQTDHQGLG*CCVLQP
Trigger: GGGCTGCAGCACACAACAGCAGCCAAGGCCCTGATG...ATCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GTTTGCCAGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCAACGCCAGTAGTCCCTaGCTCGGAAGAAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: VCQDLHSGPKTALPLKSCNASSP*LGRSRS
Trigger: AGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTT...GCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR GCA 90 bp CACCGTCGTACACCCAGTACTGAGCACCTGCCGGAGAGGGAAGGCTGCAAGGACCTCATCAGTAAAACATaGAGGCCAATAATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: HRRTPSTEHLPEREGCKDLISKT*RPIMPA
Trigger: AGCAGGCATTATTGGCCTGCATGTTTTACTGATGAG...GTCCTTGCAGCCTTCCCTCTCCGGCAGGTGCTCAGTACTGGGTGTACGACGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp CGGCCCTCGTGCACCTCAGTAAAGGTGAGTGGCGTCACATCGCTCCATACCTTTCTCAGTAAAGGTGAGTaGCGTCACATCGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: RPSCTSVKVSGVTSLHTFLSKGE*RHIAPY
Trigger: GTATGGAGCGATGTGACGCCACTCACCTTTACTGAG...AAAGGTATGGAGCGATGTGACGCCACTCACCTTTACTGAGGTGCACGAGGGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR CCA 90 bp TGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTCGGACATCAGGGCCTTaGCTGCTGTTGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: WGGNASSPCLGRSRSCSSRTSGP*LLLCAA
Trigger: TGCAGCACACAACAGCAGCCAAGGCCCTGATGTCCG...AGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp CTGTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTGCGAGAGGCCAATGCTaGGTAGCCGGGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LYTHLQWLWRIAVLRKGLARGQC*VAGLQL
Trigger: CAGCTGCAGCCCGGCTACCCAGCATTGGCCTCTCGC...AAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCAGGCAGTCCCTGCCAGTaGCGAGAGGCCAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: VHTFTMALEDSSAAKRASGSPCQ*REANAG
Trigger: CCCAGCATTGGCCTCTCGCCACTGGCAGGGACTGCC...TGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCTGGAAGAACCAAATGTaGCCCTGGGCATCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: FSASPWKEPHNRDTARTLWKNQM*PWASSK
Trigger: CTTCGAGGATGCCCAGGGCCACATTTGGTTCTTCCA...GAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCCACAAAGATGGCCATaGGTCTCTAGCCTGATATTC +
Preference number: 4 (lower is better)
Translates to: RYVAASRAWGLLHEEYPSPQRWP*VSSLIF
Trigger: GAATATCAGGCTAGAGACCCATGGCCATCTTTGTGG...GGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGCCCACAAAGATGGCCATaGGTCTCTAGCCTGATATTC +
Preference number: 4 (lower is better)
Translates to: ARRQTDAGTYQDLTSGSGPQRWP*VSSLIF
Trigger: GAATATCAGGCTAGAGACCCATGGCCATCTTTGTGG...GCCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGAGCTCAGTCCCATGCCTaGTGCCCACAGCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: GLDSGEQISRIVSQKADRAQSHA*CPQPQR
Trigger: TCTTTGTGGCTGTGGGCACCAGGCATGGGACTGAGC...TCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGACGGCAGTTGTCATGGTaGTTGTACCCCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: GLDSGEQISRIVSQKADRRQLSW*LYPTPS
Trigger: GGATGGGGTGGGGTACAACCACCATGACAACTGCCG...TCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCAGGTGACCACCATTTACAATGGCTTTaGAGGATAGCAGTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: SHAKASLPSLRQSLAGDHHLQWL*RIAVLR
Trigger: TCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATG...GTGGTCACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACGCCAGTAGTCCCTTaGAAGAACCAAATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LLQCQPLEGTSQQGYSKDTPVVP*KNQMWP
Trigger: GGGCCACATTTGGTTCTTCCAAGGGACTACTGGCGT...GTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR GCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCATCATGGGCTGCCACCTaGAGCAGGTCTGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PPHLTVNFLAWILENRFPSWAAT*SRSVPW
Trigger: CCAGGGCACAGACCTGCTGCAGGTGGCAGCCCATGA...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGGCCAAATTCATGGGCTaGCACCTGCAGCAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: WPGFWRTDFQDCQPEGRQAKFMG*HLQQVC
Trigger: ACAGACCTGCTGCAGGTGGCAGCCCATGAATTTGGC...CTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CTGTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTTCCAGTCAGTGGCCCTaGGGGGCACGGGACTGTCTA +
Preference number: 4 (lower is better)
Translates to: LYTHLQWLWRIAVLRKGLSSQWP*GARDCL
Trigger: TAGACAGTCCCGTGCCCCGCAGGGCCACTGACTGGA...AAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGACCACAGCCACAAAGATaGCCATGGGTCTCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: GLDSGEQISRIVSQKADRPQPQR*PWVSSL
Trigger: CAGGCTAGAGACCCATGGCCATCTTTGTGGCTGTGG...TCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCAGGTGACCACTTTTGGCCTGGATTCTaGAGAACAGATTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SHAKASLPSLRQSLAGDHFWPGF*RTDFQD
Trigger: ATCCTGGAAATCTGTTCTCCAGAATCCAGGCCAAAA...GTGGTCACCTGCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp TGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGTGGCCATATAGGTGTTaGACGCCCCTGCAGTCATCT +
Preference number: 4 (lower is better)
Translates to: WPGFWRTDFQDCQPEGRQWPYRC*TPLQSS
Trigger: AGATGACTGCAGGGGCGTTCAACACCTATATGGCCA...CTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp AACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTCGGGACCCCGATAAGCTGGGGCAGTaGATGCTCTGTAAACTAGTG +
Preference number: 4 (lower is better)
Translates to: NASSPCLGRSRSCSSRDPDKLGQ*MLCKLV
Trigger: CACTAGTTTACAGAGCATTCACTGCCCCAGCTTATC...GGGGTCCCGAGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp TTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCTCTGCCATCGTCTaGCGCACCTGCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: LTVNFLAWILENRFPGLSASAIV*RTCSCT
Trigger: GGTGCAGGAGCAGGTGCGGCAGACGATGGCAGAGGC...TGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCATTGGCTGCTGTTGTGTaGTGCAGCCCCAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: VHTFTMALEDSSAAKRASLAAVV*CSPSTW
Trigger: CCACGTGCTGGGGCTGCAGCACACAACAGCAGCCAA...TGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTCAACGCCAGTAGTCCCTaGCTCGGAAGAAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: GVETPVVPASEEVDLVLLNASSP*LGRSRS
Trigger: AGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTT...GAGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCATGTCTACACGCCGGGTaGTGGGGTGGAAACGCCAGT +
Preference number: 4 (lower is better)
Translates to: PPHLTVNFLAWILENRFPCLHAG*WGGNAS
Trigger: ACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACA...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp GTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCACAGTTCCCCCAGTCCTaGCATGGTGCTACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VHTFTMALEDSSAAKRASQFPQS*HGATLR
Trigger: CCTCAGGGTAGCACCATGGCAGGACTGGGGGAACTG...TGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAGCACCCTTGCTTCAGTaGCAGCCCCTGGAAGGAACC +
Preference number: 4 (lower is better)
Translates to: PPHLTVNFLAWILENRFPAPLLQ*QPLEGT
Trigger: GGTTCCTTCCAGGGGCTGGCACTGAAGCAAGGGTGC...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCACTCAGGAAGTGGCCCTaGCCTACAGCCCAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PPHLTVNFLAWILENRFPLRKWP*PTAQLL
Trigger: GAGCAACTGGGCTGTAGGGCAGGGCCACTTCCTGAG...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGACTGCACCAACTGCCATaGGAACCGAAGGATCCTGTA +
Preference number: 4 (lower is better)
Translates to: GLDSGEQISRIVSQKADRLHQLP*EPKDPV
Trigger: TACAGGATCCTTCGGTTCCCATGGCAGTTGGTGCAG...TCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR CCA 90 bp GTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCATGCAGCCCCAGCACGTaGCCAAATTCATGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VHTFTMALEDSSAAKRASCSPST*PNSWAA
Trigger: GGCAGCCCATGAATTTGGCCACGTGCTGGGGCTGCA...TGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAAGAGCTCGCCTCGGATaGTGGAGACCGCGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: PPHLTVNFLAWILENRFPRARLG*WRPRQR
Trigger: CCTTTGACGCGGTCTCCACCATCCGAGGCGAGCTCT...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGGCAGTCCCTGCCAGTaGCGAGAGGCCAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: LTVNFLAWILENRFPGLSGSPCQ*REANAG
Trigger: CCCAGCATTGGCCTCTCGCCACTGGCAGGGACTGCC...TGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CTGTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCTACACGCCGGGTGCTaGGGTGGAAACGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: LYTHLQWLWRIAVLRKGLLHAGC*GGNASS
Trigger: ACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAG...AAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCATTTACAATGGCTTTaGAGGATAGCAGTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: SPWKEPHNRDTARTLQFPHLQWL*RIAVLR
Trigger: TCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATG...GGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp GGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGAACACAAAGCCCGCTTTaGAGAAAAAGAGCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: GLDSGEQISRIVSQKADRTQSPL*RKRARL
Trigger: GAGGCGAGCTCTTTTTCTTCAAAGCGGGCTTTGTGT...TCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp GTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCAGGCCTGGGACAGGATTaGGGTATGTTGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VHTFTMALEDSSAAKRASGLGQD*GMLQPP
Trigger: TGGAGGCTGCAACATACCTCAATCCTGTCCCAGGCC...TGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp TGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGGTCTGGCTCCAGCGGTaGAATCTCATTGGTGTCTAT +
Preference number: 4 (lower is better)
Translates to: WPGFWRTDFQDCQPEGRQVWLQR*NLIGVY
Trigger: ATAGACACCAATGAGATTGCACCGCTGGAGCCAGAC...CTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAAGGTTTGCCAGGACCTaGATAGCGGGCCCAAGACTG +
Preference number: 4 (lower is better)
Translates to: PPHLTVNFLAWILENRFPRFART*IAGPRL
Trigger: CAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAACCT...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAAGGATTGAGGTATGTTaGAGCCTCCAGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PPHLTVNFLAWILENRFPRIEVC*SLQGLG
Trigger: CCCCAGGCCCTGGAGGCTGCAACATACCTCAATCCT...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGCTCAGTAAAGGTGAGTaGCGTCACATCGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: WPGFWRTDFQDCQPEGRQLSKGE*RHIAPY
Trigger: GTATGGAGCGATGTGACGCCACTCACCTTTACTGAG...CTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAGCCCCTGCAGTCATCTaGGCTGAGACTCAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: PPHLTVNFLAWILENRFPAPAVI*AETQWV
Trigger: TACCCACTGAGTCTCAGCCCAGATGACTGCAGGGGC...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCAAACCAAATGTGGCCCTaGGCATCCTCGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: VHTFTMALEDSSAAKRASNQMWP*ASSKAA
Trigger: CGCTGCCTTCGAGGATGCCCAGGGCCACATTTGGTT...TGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CTCAGTTTCCTCATCAGTAAAACATGCAGGCCAATAATGCCTGCTCAGCACCCCTGGAAGAACCAAATGTaGCCCTGGGCATCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: LSFLISKTCRPIMPAQHPWKNQM*PWASSK
Trigger: CTTCGAGGATGCCCAGGGCCACATTTGGTTCTTCCA...GGGGTGCTGAGCAGGCATTATTGGCCTGCATGTTTTACTGATGAGGAAACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CCA 90 bp ACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCTACCCTACACACATTTACAATaGCTTTGGAGGATAGCAGTG +
Preference number: 4 (lower is better)
Translates to: TGIQQGHSSSPSPAMVLPYTHLQ*LWRIAV
Trigger: CACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTA...GGGTAGCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp CTCAGTTTCCTCATCAGTAAAACATGCAGGCCAATAATGCCTGCTCAGCACCCCACACAAAGCCCGCTTTaGAGAAAAAGAGCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: LSFLISKTCRPIMPAQHPTQSPL*RKRARL
Trigger: GAGGCGAGCTCTTTTTCTTCAAAGCGGGCTTTGTGT...GGGGTGCTGAGCAGGCATTATTGGCCTGCATGTTTTACTGATGAGGAAACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR TCA 90 bp CTCAGTTTCCTCATCAGTAAAACATGCAGGCCAATAATGCCTGCTCAGCACCCCACTGGCATTTGGCTGTaGCAAATGCCTACTGACCAC +
Preference number: 4 (lower is better)
Translates to: LSFLISKTCRPIMPAQHPTGIWL*QMPTDH
Trigger: GTGGTCAGTAGGCATTTGTCACAGCCAAATGCCAGT...GGGGTGCTGAGCAGGCATTATTGGCCTGCATGTTTTACTGATGAGGAAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR GCA 90 bp GCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGATGTCTGGCTCCAGCGGTaGAATCTCATTGGTGTCTAT +
Preference number: 4 (lower is better)
Translates to: AWILENRFPGLSARRQTDVWLQR*NLIGVY
Trigger: ATAGACACCAATGAGATTGCACCGCTGGAGCCAGAC...ATCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CTGTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCTTCTCGGTGAGTCTTaGGGAAGAAGGCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: LYTHLQWLWRIAVLRKGLLLGES*GRRHGP
Trigger: TGGCCCATGCCTTCTTCCCCAAGACTCACCGAGAAG...AAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CTGTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTTTCAGTGCCAGCCCCTaGAAGGAACCTCACAACAGG +
Preference number: 4 (lower is better)
Translates to: LYTHLQWLWRIAVLRKGLFSASP*KEPHNR
Trigger: CCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAA...AAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp TTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCTTTTGGCCTGGATTCTaGAGAACAGATTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: FSASPWKEPHNRDTARTLFWPGF*RTDFQD
Trigger: ATCCTGGAAATCTGTTCTCCAGAATCCAGGCCAAAA...GAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGGCGTGAACTTTTTGGCCTaGATTCTGGAGAACAGATTT +
Preference number: 4 (lower is better)
Translates to: LPLKSCQSLPAQSETVAGVNFLA*ILENRF
Trigger: AAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCAC...GCCAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGTGAACTTTTTGGCCTaGATTCTGGAGAACAGATTT +
Preference number: 4 (lower is better)
Translates to: PHNRDTARTLQFPQSCHGVNFLA*ILENRF
Trigger: AAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCAC...ACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCGTGAACTTTTTGGCCTaGATTCTGGAGAACAGATTT +
Preference number: 4 (lower is better)
Translates to: SPWKEPHNRDTARTLQFPVNFLA*ILENRF
Trigger: AAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCAC...GGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp AGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCAAAGCCTACACACATTTACAATaGCTTTGGAGGATAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RTCIAGPRLPFLLSHAKAYTHLQ*LWRIAV
Trigger: CACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTA...GGCTTTGGCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTTACACACATTTACAATaGCTTTGGAGGATAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PHNRDTARTLQFPQSCHGYTHLQ*LWRIAV
Trigger: CACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTA...ACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCACTGCACCAACTGCCATaGGAACCGAAGGATCCTGTA +
Preference number: 4 (lower is better)
Translates to: VHTFTMALEDSSAAKRASLHQLP*EPKDPV
Trigger: TACAGGATCCTTCGGTTCCCATGGCAGTTGGTGCAG...TGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR CCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCATGGAAGAACCAAATGTaGCCCTGGGCATCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: PPHLTVNFLAWILENRFPWKNQM*PWASSK
Trigger: CTTCGAGGATGCCCAGGGCCACATTTGGTTCTTCCA...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CTGTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTAGGGCATCCAAGCCATaGTCAGAGGAAAGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LYTHLQWLWRIAVLRKGLRASKP*SEESVG
Trigger: GCCAACACTTTCCTCTGACCATGGCTTGGATGCCCT...AAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGATCCACAAAGATGGCCATaGGTCTCTAGCCTGATATTC +
Preference number: 4 (lower is better)
Translates to: AWILENRFPGLSARRQTDPQRWP*VSSLIF
Trigger: GAATATCAGGCTAGAGACCCATGGCCATCTTTGTGG...ATCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR TCA 90 bp GTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCAACACAAAGCCCGCTTTaGAGAAAAAGAGCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: VHTFTMALEDSSAAKRASTQSPL*RKRARL
Trigger: GAGGCGAGCTCTTTTTCTTCAAAGCGGGCTTTGTGT...TGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR GCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAGTCTGGCTCCAGCGGTaGAATCTCATTGGTGTCTAT +
Preference number: 4 (lower is better)
Translates to: PPHLTVNFLAWILENRFPVWLQR*NLIGVY
Trigger: ATAGACACCAATGAGATTGCACCGCTGGAGCCAGAC...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CTGTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTTGGGCTGAGACTCAGTaGGTAGCGAAAGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LYTHLQWLWRIAVLRKGLWAETQ*VAKGVE
Trigger: TTCTACACCTTTCGCTACCCACTGAGTCTCAGCCCA...AAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp GTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCATGGGCTGAGACTCAGTaGGTAGCGAAAGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: VHTFTMALEDSSAAKRASWAETQ*VAKGVE
Trigger: TTCTACACCTTTCGCTACCCACTGAGTCTCAGCCCA...TGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CCA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCACATTTACAATGGCTTTaGAGGATAGCAGTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: PPHLTVNFLAWILENRFPHLQWL*RIAVLR
Trigger: TCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATG...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS CCA 90 bp CTGGGCAGGGCTGCATGCCAGGGCTGTGGCCCCCTCCTCTCGGCATaGAGGTGGTGGGCGTCCGGCGGCAGAGCCCGGGCCAGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: LGRAACQGCGPLLSA*RWWASGGRARASSG
Trigger: GCCGCTGCTGGCCCGGGCTCTGCCGCCGGACGCCCACCACCTCCATGCCGAGAGGAGGGGGCCACAGCCCTGGCATGCAGCCCTGCCCAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000215743.8
ENST00000428253.1
ENST00000437086.5
ENST00000465730.1
ENST00000612388.3
ENST00000628212.2
ENST00000629467.1
ENST00000629514.2
CDS CCA 90 bp GTCCACAGGGCTGGGCAGTCCCTGCCAGTGGCGAGAGGCCAATGCTaGGTAGCCGGGCTGCAGCTGGCCCCCACGGAGGCGCCACACAAA +
Preference number: 5 (lower is better)
Translates to: VHRAGQSLPVARGQC*VAGLQLAPTEAPHK
Trigger: TTTGTGTGGCGCCTCCGTGGGGGCCAGCTGCAGCCCGGCTACCCAGCATTGGCCTCTCGCCACTGGCAGGGACTGCCCAGCCCTGTGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000215743.8
ENST00000434318.1
ENST00000437086.5
ENST00000465385.5
ENST00000488363.1
ENST00000492464.1
ENST00000493132.1
ENST00000612388.3
ENST00000625962.1
ENST00000626587.1
ENST00000627283.1
ENST00000628530.2
ENST00000629008.1
ENST00000629514.2
CDS CCA 90 bp CTGGGCAGGGCTGCATGCCAGGGCTGTGGCCCCCTCCTCTCGGCATaGAGGTGGTGGGCGTCCAGGCGACCTGTTCCATCATGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: LGRAACQGCGPLLSA*RWWASRRPVPSWVA
Trigger: GGCCACCCATGATGGAACAGGTCGCCTGGACGCCCACCACCTCCATGCCGAGAGGAGGGGGCCACAGCCCTGGCATGCAGCCCTGCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS CCA 90 bp GCTGCATGCCAGGGCTGTGGCCCCCTCCTCTCGGCATGGAGGTGGTaGGCGTCCAGGCGACCTGTTCCATCATGGGTGGCCCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: AACQGCGPLLSAWRW*ASRRPVPSWVALQS
Trigger: GCTCTGCAGGGCCACCCATGATGGAACAGGTCGCCTGGACGCCCACCACCTCCATGCCGAGAGGAGGGGGCCACAGCCCTGGCATGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS CCA 90 bp AGGGCTGCATGCCAGGGCTGTGGCCCCCTCCTCTCGGCATGGAGGTaGTGGGCGTCCAGGCGACCTGTTCCATCATGGGTGGCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: RAACQGCGPLLSAWR*WASRRPVPSWVALQ
Trigger: CTGCAGGGCCACCCATGATGGAACAGGTCGCCTGGACGCCCACCACCTCCATGCCGAGAGGAGGGGGCCACAGCCCTGGCATGCAGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS CCA 90 bp GCTGCATGCCAGGGCTGTGGCCCCCTCCTCTCGGCATGGAGGTGGTaGGCGTCCACCTCACCAGGCGACCTGTTCCATCATGGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: AACQGCGPLLSAWRW*ASTSPGDLFHHGWP
Trigger: GGGCCACCCATGATGGAACAGGTCGCCTGGTGAGGTGGACGCCCACCACCTCCATGCCGAGAGGAGGGGGCCACAGCCCTGGCATGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477567.5
ENST00000628782.2
CDS GCA 90 bp GGAGGTGGTGGGCGTCCAGGCGACCTGTTCCATCATGGGTGGCCCTaGAGAGCCACGATCCAGGCAGTGGCTCGCATCCTGGCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: GGGGRPGDLFHHGWP*RATIQAVARILAGR
Trigger: CCTGCCTGCCAGGATGCGAGCCACTGCCTGGATCGTGGCTCTGCAGGGCCACCCATGATGGAACAGGTCGCCTGGACGCCCACCACCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS CCA 90 bp CCGAAGGATCCTCTTCTGTCGGTTGCGGGCACTCAGCCCATCAGATaGGTCGGGCACGCCACAGCGGGGAGGCCTGAGGCTGCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: PKDPLLSVAGTQPIR*VGHATAGRPEAAGR
Trigger: CCTGCCAGCAGCCTCAGGCCTCCCCGCTGTGGCGTGCCCGACCCATCTGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGATCCTTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS CCA 90 bp AGGGCTGCATGCCAGGGCTGTGGCCCCCTCCTCTCGGCATGGAGGTaGTGGGCGTCCACCTCACCAGGCGACCTGTTCCATCATGGGTGG +
Preference number: 5 (lower is better)
Translates to: RAACQGCGPLLSAWR*WASTSPGDLFHHGW
Trigger: CCACCCATGATGGAACAGGTCGCCTGGTGAGGTGGACGCCCACCACCTCCATGCCGAGAGGAGGGGGCCACAGCCCTGGCATGCAGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477567.5
ENST00000628782.2
CDS CCA 90 bp CTGGGCAGGGCTGCATGCCAGGGCTGTGGCCCCCTCCTCTCGGCATaGAGGTGGTGGGCGTCCACCTCACCAGGCGACCTGTTCCATCAT +
Preference number: 5 (lower is better)
Translates to: LGRAACQGCGPLLSA*RWWASTSPGDLFHH
Trigger: ATGATGGAACAGGTCGCCTGGTGAGGTGGACGCCCACCACCTCCATGCCGAGAGGAGGGGGCCACAGCCCTGGCATGCAGCCCTGCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477567.5
ENST00000628782.2
CDS GCA 90 bp TGGGCGTCCACCTCACCAGGCGACCTGTTCCATCATGGGTGGCCCTaGAGAGCCACGATCCAGGCAGTGGCTCGCATCCTGGCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: WASTSPGDLFHHGWP*RATIQAVARILAGR
Trigger: CCTGCCTGCCAGGATGCGAGCCACTGCCTGGATCGTGGCTCTGCAGGGCCACCCATGATGGAACAGGTCGCCTGGTGAGGTGGACGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477567.5
ENST00000628782.2
CDS CCA 90 bp AAGCACGAACCTCTTCTGTCGGTTGCGGGCACTCAGCCCATCAGATaGGTCGGGCACGCCACAGCGGGGAGGCCTGAGGCTGCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: KHEPLLSVAGTQPIR*VGHATAGRPEAAGR
Trigger: CCTGCCAGCAGCCTCAGGCCTCCCCGCTGTGGCGTGCCCGACCCATCTGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGTTCGTGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000215743.8
ENST00000428253.1
ENST00000460352.1
ENST00000465385.5
ENST00000465730.1
ENST00000477567.5
ENST00000489582.5
ENST00000612388.3
ENST00000626399.1
ENST00000628212.2
ENST00000628530.2
ENST00000628782.2
ENST00000628805.2
ENST00000629467.1
CDS CCA 90 bp GGCCAACAGTCGAAGACGGGTTGGGACGCCCCCTCGTGGGAGTTCTaGGGATGGGTTGCTCCAGGCCTTCCCCAGGGCCGCGCTTCACTT +
Preference number: 5 (lower is better)
Translates to: GQQSKTGWDAPSWEF*GWVAPGLPQGRASL
Trigger: AAGTGAAGCGCGGCCCTGGGGAAGGCCTGGAGCAACCCATCCCCAGAACTCCCACGAGGGGGCGTCCCAACCCGTCTTCGACTGTTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS GCA 90 bp TCTTCTCCCAGCGCCCGCCAGAAAGCACGAACCTCTTCTGTCGGTTaGGGGCACTCAGCCCATCAGATGGGTCGGGCACGCCACAGCGGG +
Preference number: 5 (lower is better)
Translates to: SSPSARQKARTSSVG*GHSAHQMGRARHSG
Trigger: CCCGCTGTGGCGTGCCCGACCCATCTGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGTTCGTGCTTTCTGGCGGGCGCTGGGAGAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000215743.8
ENST00000428253.1
ENST00000460352.1
ENST00000465385.5
ENST00000465730.1
ENST00000477567.5
ENST00000489582.5
ENST00000612388.3
ENST00000626399.1
ENST00000628212.2
ENST00000628530.2
ENST00000628782.2
ENST00000628805.2
ENST00000629467.1
CDS CCA 90 bp AGGTGGTGGGCGTCCACCTCACCAGGCGACCTGTTCCATCATGGGTaGCCCTGCAGAGCCACGATCCAGGCAGTGGCTCGCATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: RWWASTSPGDLFHHG*PCRATIQAVARILA
Trigger: TGCCAGGATGCGAGCCACTGCCTGGATCGTGGCTCTGCAGGGCCACCCATGATGGAACAGGTCGCCTGGTGAGGTGGACGCCCACCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477567.5
ENST00000628782.2
CDS-3UTR CAA 90 bp CCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCATCCCCCCGGCCTGGGACAGGATaGAGGTATGTTGCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: PAWPSRQLSWWLYPTPSPRPGTG*RYVAAS
Trigger: GGAGGCTGCAACATACCTCAATCCTGTCCCAGGCCG...GGGGGATGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS TCA 90 bp CGGGCTGCAGCTGGCCCCCACGGAGGCGCCACACAAAGCCCGCTTTaGAGAAAAAGAGCTCGCCTCGGATGGTGGAGACCGCGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: RAAAGPHGGATQSPL*RKRARLGWWRPRQR
Trigger: CCTTTGACGCGGTCTCCACCATCCGAGGCGAGCTCTTTTTCTTCAAAGCGGGCTTTGTGTGGCGCCTCCGTGGGGGCCAGCTGCAGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000215743.8
ENST00000434318.1
ENST00000437086.5
ENST00000465385.5
ENST00000492464.1
ENST00000493132.1
ENST00000612388.3
ENST00000626587.1
ENST00000627283.1
ENST00000628530.2
ENST00000629008.1
ENST00000629514.2
CDS GCA 90 bp GGCGTCTGGCTGGGGTGGGAGAGAGGGACACATGCTGAGGGCATATaGTGCAGTCACAGTGGCCAGCAGAGGAGTAGGGGGACTGGCAGG +
Preference number: 5 (lower is better)
Translates to: GVWLGWERGTHAEGI*CSHSGQQRSRGTGR
Trigger: CCTGCCAGTCCCCCTACTCCTCTGCTGGCCACTGTGACTGCAGCATATGCCCTCAGCATGTGTCCCTCTCTCCCACCCCAGCCAGACGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493132.1
ENST00000629008.1
CDS CCA 90 bp ATGGAGGTGGTGGGCGTCCACCTCACCAGGCGACCTGTTCCATCATaGGTGGCCCTGCAGAGCCACGATCCAGGCAGTGGCTCGCATCCT +
Preference number: 5 (lower is better)
Translates to: MEVVGVHLTRRPVPS*VALQSHDPGSGSHP
Trigger: AGGATGCGAGCCACTGCCTGGATCGTGGCTCTGCAGGGCCACCCATGATGGAACAGGTCGCCTGGTGAGGTGGACGCCCACCACCTCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477567.5
ENST00000628782.2
CDS CCA 90 bp CCACCTCCCACCAGCTGCCTCACCCCCAACGCACCATCAGCATCCTaGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: PPPTSCLTPNAPSAS*KAASISEGTPLQSV
Trigger: CACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGATGCTGATGGTGCGTTGGGGGTGAGGCAGCTGGTGGGAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000488363.1
ENST00000625962.1
CDS-3UTR CAA 90 bp ATGCAGGCCAATAATGCCTGCTCAGCACCCCACCCGCAGAGGGAAGCGGGAGGCGCGGACATCAGGGCCTaGGCTGCTGTTGTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: MQANNACSAPHPQREAGGADIRA*AAVVCC
Trigger: GCAGCACACAACAGCAGCCAAGGCCCTGATGTCCGC...GCCTCCCGCTTCCCTCTGCGGGTGGGGTGCTGAGCAGGCATTATTGGCCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CAA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCACAGTTGTCATGGTGGTaGTACCCCACCCCATCCCCC +
Preference number: 5 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPQLSWW*YPTPSP
Trigger: GGGGGATGGGGTGGGGTACAACCACCATGACAACTG...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS GCA 90 bp TTTAGGGCCTCTGCCATCGTCTGCCGCACCTGCTCCTGCACCAACTaGCATGGGAACCGAAGGATCCTGGAGGGAGATGGAGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: FRASAIVCRTCSCTN*HGNRRILEGDGGAW
Trigger: CCAGGCCCCTCCATCTCCCTCCAGGATCCTTCGGTTCCCATGGCAGTTGGTGCAGGAGCAGGTGCGGCAGACGATGGCAGAGGCCCTAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS GCA 90 bp GTCTGGCTGGGGTGGGAGAGAGGGACACATGCTGAGGGCATATGCTaGAGTCACAGTGGCCAGCAGAGGAGTAGGGGGACTGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: VWLGWERGTHAEGIC*SHSGQQRSRGTGRQ
Trigger: CTGCCTGCCAGTCCCCCTACTCCTCTGCTGGCCACTGTGACTGCAGCATATGCCCTCAGCATGTGTCCCTCTCTCCCACCCCAGCCAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493132.1
ENST00000629008.1
CDS CCA 90 bp GGGGTGGAAACGCCAGTAGTCCCTTGGAAGAACCAAATGTGGCCCTaGGCATCCTCGAAGGCAGCGTCCACAGGGCTGGGCAGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: GVETPVVPWKNQMWP*ASSKAASTGLGSPC
Trigger: GCAGGGACTGCCCAGCCCTGTGGACGCTGCCTTCGAGGATGCCCAGGGCCACATTTGGTTCTTCCAAGGGACTACTGGCGTTTCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS CCA 90 bp AGTCAGTGGCCCTGCGGGGCACGGGACTGTCTACACGCCGGGTGCTaGGGTGGAAACGCCAGTAGTCCCTTGGAAGAACCAAATGTGGCC +
Preference number: 5 (lower is better)
Translates to: SQWPCGARDCLHAGC*GGNASSPLEEPNVA
Trigger: GGCCACATTTGGTTCTTCCAAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCAGGGCCACTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS CCA 90 bp GACTGGCTTTTCACCGTCGTACACCCAGTACTGAGCACCACTCCCTaGGCCCCTGCAGGCTGGACTGCCCTGGAACCCACGCAGGTTTCC +
Preference number: 5 (lower is better)
Translates to: DWLFTVVHPVLSTTP*APAGWTALEPTQVS
Trigger: GGAAACCTGCGTGGGTTCCAGGGCAGTCCAGCCTGCAGGGGCCCAGGGAGTGGTGCTCAGTACTGGGTGTACGACGGTGAAAAGCCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480185.1
ENST00000628372.1
CDS CCA 90 bp CAGATCCCCAACCCCCACTCACCTTGGAAGAACCAAATGTGGCCCTaGGCATCCTCGAAGGCAGCGTCCACAGGGCTGGGCAGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: QIPNPHSPWKNQMWP*ASSKAASTGLGSPC
Trigger: GCAGGGACTGCCCAGCCCTGTGGACGCTGCCTTCGAGGATGCCCAGGGCCACATTTGGTTCTTCCAAGGTGAGTGGGGGTTGGGGATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492464.1
ENST00000626587.1
CDS GCA 90 bp TCCAGTCAGTGGCCCTGCGGGGCACGGGACTGTCTACACGCCGGGTaGTGGGGTGGAAACGCCAGTAGTCCCTTGGAAGAACCAAATGTG +
Preference number: 5 (lower is better)
Translates to: SSQWPCGARDCLHAG*WGGNASSPLEEPNV
Trigger: CACATTTGGTTCTTCCAAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCAGGGCCACTGACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS GCA 90 bp ACGATCCAGGCAGTGGCTCGCATCCTGGCAGGCAGGGCTCTGAGCTaGTCAAAGGTGAGGCTGTGGTCAGGAAGCCTGGGCCAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: TIQAVARILAGRALS*SKVRLWSGSLGQER
Trigger: CCTTTCTTGGCCCAGGCTTCCTGACCACAGCCTCACCTTTGAGCAGCTCAGAGCCCTGCCTGCCAGGATGCGAGCCACTGCCTGGATCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS GCA 90 bp TTTCACCGTCGTACACCCAGTACTGAGCACCACTCCCTGGGCCCCTaGAGGCTGGACTGCCCTGGAACCCACGCAGGTTTCCCATGCTGT +
Preference number: 5 (lower is better)
Translates to: FHRRTPSTEHHSLGP*RLDCPGTHAGFPCC
Trigger: ACAGCATGGGAAACCTGCGTGGGTTCCAGGGCAGTCCAGCCTGCAGGGGCCCAGGGAGTGGTGCTCAGTACTGGGTGTACGACGGTGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480185.1
ENST00000628372.1
CDS GCA 90 bp ACGATCCAGGCAGTGGCTCGCATCCTGGCAGGCAGGGCTCTGAGCTaGTCAAAGGTGAGGCTGTGGTCAGGAAGCCTGGCCTGGAACGAA +
Preference number: 5 (lower is better)
Translates to: TIQAVARILAGRALS*SKVRLWSGSLAWNE
Trigger: TTCGTTCCAGGCCAGGCTTCCTGACCACAGCCTCACCTTTGAGCAGCTCAGAGCCCTGCCTGCCAGGATGCGAGCCACTGCCTGGATCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477567.5
ENST00000628782.2
CDS CCA 90 bp CGCATCCTGGCAGGCAGGGCTCTGAGCTGCTCAAAGGTGAGGCTGTaGTCAGGAAGCCTGGGCCAAGAAAGGGAAGCGGGTGGGGAAATG +
Preference number: 5 (lower is better)
Translates to: RILAGRALSCSKVRL*SGSLGQEREAGGEM
Trigger: CATTTCCCCACCCGCTTCCCTTTCTTGGCCCAGGCTTCCTGACCACAGCCTCACCTTTGAGCAGCTCAGAGCCCTGCCTGCCAGGATGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS-3UTR CAA 90 bp CCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCCCAAGCGGTGCAATCTCATaGGTGTCTATCCCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: PRPAWPSRQLSWWLYPTPSGAIS*VSIPAW
Trigger: CCAGGCTGGGATAGACACCAATGAGATTGCACCGCT...TGGGGTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp ATCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGGTCAGAGGAAAGTGTaGGCAGGCTCGGCACAGCCA +
Preference number: 5 (lower is better)
Translates to: ILEGSVDLRGHPSPVSGPGQRKV*AGSAQP
Trigger: TGGCTGTGCCGAGCCTGCCAACACTTTCCTCTGACC...AGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CAA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCTGGCCCTCCCGGCAGTaGTCATGGTGGTTGTACCCC +
Preference number: 5 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPWPSRQ*SWWLYP
Trigger: GGGGTACAACCACCATGACAACTGCCGGGAGGGCCA...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS CCA 90 bp GATGGCTCTGGACAAAGGACCTGTGATGAAGAGCCAGACTTCCTGTaGCAGGCATGTGGGAGCCCAGCCACCACCAGGTGGGAGAAGCGG +
Preference number: 5 (lower is better)
Translates to: DGSGQRTCDEEPDFL*QACGSPATTRWEKR
Trigger: CCGCTTCTCCCACCTGGTGGTGGCTGGGCTCCCACATGCCTGCCACAGGAAGTCTGGCTCTTCATCACAGGTCCTTTGTCCAGAGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488363.1
ENST00000625962.1
CDS-3UTR CAA 90 bp TCTTCTCGGGACCCCAGACCAAGGCAGCATGGACCGGGAACCTCACCAGGCCCAAGCGGTGCAATCTCATaGGTGTCTATCCCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: SSRDPRPRQHGPGTSPGPSGAIS*VSIPAW
Trigger: CCAGGCTGGGATAGACACCAATGAGATTGCACCGCT...TGGGCCTGGTGAGGTTCCCGGTCCATGCTGCCTTGGTCTGGGGTCCCGAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS TCA 90 bp GGTGCGGGGCCCAGGACTGGCTTTTCACCGTCGTACACCCAGTACTaGGCACCTTGGAAGAACCAAATGTGGCCCTGGGCATCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: GAGPRTGFSPSYTQY*APWKNQMWPWASSK
Trigger: CTTCGAGGATGCCCAGGGCCACATTTGGTTCTTCCAAGGTGCTCAGTACTGGGTGTACGACGGTGAAAAGCCAGTCCTGGGCCCCGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000215743.8
ENST00000465385.5
ENST00000488363.1
ENST00000493132.1
ENST00000612388.3
ENST00000625962.1
ENST00000628530.2
ENST00000629008.1
CDS TCA 90 bp ATGGCTGAGGCACCAGGAGTTGCCCCTGGATGCTTGGTGGGTGTGTaGACACTCAGGACACAGGCCAGGTGTACTCTGGGCCTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: MAEAPGVAPGCLVGV*TLRTQARCTLGLSF
Trigger: GAAGCTGAGGCCCAGAGTACACCTGGCCTGTGTCCTGAGTGTTCACACACCCACCAAGCATCCAGGGGCAACTCCTGGTGCCTCAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS GCA 90 bp CAGTGGGTAGCGAAAGGTGTAGAAGGCGGACATCAGGGCCTTGGCTaGTGTTGTGTGCTGCAGCCCCAGCACGTGGCCAAATTCATGGGC +
Preference number: 5 (lower is better)
Translates to: QWVAKGVEGGHQGLG*CCVLQPQHVAKFMG
Trigger: GCCCATGAATTTGGCCACGTGCTGGGGCTGCAGCACACAACAGCAGCCAAGGCCCTGATGTCCGCCTTCTACACCTTTCGCTACCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000215743.8
ENST00000434318.1
ENST00000437086.5
ENST00000460352.1
ENST00000465385.5
ENST00000477567.5
ENST00000612388.3
ENST00000626399.1
ENST00000627283.1
ENST00000628530.2
ENST00000628782.2
ENST00000629514.2
CDS GCA 90 bp ACATCGCTCCATACCTTTAGGGCCTCTGCCATCGTCTGCCGCACCTaGTCCTGCACCAACTGCCATGGGAACCGAAGGATCCTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: TSLHTFRASAIVCRT*SCTNCHGNRRILEG
Trigger: TCCCTCCAGGATCCTTCGGTTCCCATGGCAGTTGGTGCAGGAGCAGGTGCGGCAGACGATGGCAGAGGCCCTAAAGGTATGGAGCGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS GCA 90 bp ACGCTGCTCCTATCTCAAGAGCCACCTCCGAGAACCTCCTACCTGTaGCTGAGGAACAAACCACACTCTCTCTCCCTCGGCCCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: TLLLSQEPPPRTSYL*LRNKPHSLSLGPQA
Trigger: AGCCTGGGGGCCGAGGGAGAGAGAGTGTGGTTTGTTCCTCAGGCACAGGTAGGAGGTTCTCGGAGGTGGCTCTTGAGATAGGAGCAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492464.1
ENST00000626587.1
CDS CCA 90 bp GTTGAGGATGGAAATCCCAGCTCTTGGAAGAACCAAATGTGGCCCTaGGCATCCTCGAAGGCAGCGTCCACAGGGCTGGGCAGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: VEDGNPSSWKNQMWP*ASSKAASTGLGSPC
Trigger: GCAGGGACTGCCCAGCCCTGTGGACGCTGCCTTCGAGGATGCCCAGGGCCACATTTGGTTCTTCCAAGAGCTGGGATTTCCATCCTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS CCA 90 bp AGATCTACCCTGGCCTGTGTCTCAAGCAGCAGCTGTGAGGGCAGCTaGCTTACCCACGGACACACAGGTGGCATCCTAGTGTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RSTLACVSSSSCEGS*LTHGHTGGILVSCS
Trigger: GGAGCAGGACACTAGGATGCCACCTGTGTGTCCGTGGGTAAGCCAGCTGCCCTCACAGCTGCTGCTTGAGACACAGGCCAGGGTAGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465385.5
ENST00000465730.1
ENST00000628212.2
ENST00000628530.2
CDS-3UTR CAA 90 bp CTGCACCAACTGCCATGGGAACCGAAGGATCCCACGGACACACAGGTGGCATCCAACCTCTTCTGTCGGTaGCGGGCACTCAGCCCATCA +
Preference number: 5 (lower is better)
Translates to: LHQLPWEPKDPTDTQVASNLFCR*RALSPS
Trigger: TGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGTT...GGATGCCACCTGTGTGTCCGTGGGATCCTTCGGTTCCCATGGCAGTTGGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428253.1
CDS-3UTR CAA 90 bp ATCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTAGCGGTGCAATCTCATaGGTGTCTATCCCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: ILEGSVDLRGHPSPVSGPSGAIS*VSIPAW
Trigger: CCAGGCTGGGATAGACACCAATGAGATTGCACCGCT...AGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434318.1
ENST00000437086.5
ENST00000627283.1
ENST00000629514.2
CDS-3UTR CAA 90 bp TGCGGGGCACGGGACTGTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCACACAAAGCCCGCTTaGAAGAAAAAGAGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: CGARDCLHAGCWGGNASSHTKPA*KKKSSP
Trigger: AGGCGAGCTCTTTTTCTTCAAAGCGGGCTTTGTGTG...ACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAGTCCCGTGCCCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CAA 90 bp AGGCCAATAATGCCTGCTCAGCACCCCACCCGCAGAGGGAAGCGGGAGGCCTGGCACACAAAGCCCGCTTaGAAGAAAAAGAGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: RPIMPAQHPTRRGKREAWHTKPA*KKKSSP
Trigger: AGGCGAGCTCTTTTTCTTCAAAGCGGGCTTTGTGTG...CCAGGCCTCCCGCTTCCCTCTGCGGGTGGGGTGCTGAGCAGGCATTATTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CAA 90 bp GCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCAGGAGGATCCGGCCTGGGAGGTCAGAGGAAAGTGTaGGCAGGCTCGGCACAGCCA +
Preference number: 5 (lower is better)
Translates to: ALEDSSAAKRASGGSGLGGQRKV*AGSAQP
Trigger: TGGCTGTGCCGAGCCTGCCAACACTTTCCTCTGACC...TCCCAGGCCGGATCCTCCTGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp CCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTTGGCCCTCCCGGCAGTaGTCATGGTGGTTGTACCCC +
Preference number: 5 (lower is better)
Translates to: PHNRDTARTLQFPQSCHGWPSRQ*SWWLYP
Trigger: GGGGTACAACCACCATGACAACTGCCGGGAGGGCCA...ACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp TCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTGCTGGCCCTCCCGGCAGTaGTCATGGTGGTTGTACCCC +
Preference number: 5 (lower is better)
Translates to: SQQGYSKDTPVPPVLPWCWPSRQ*SWWLYP
Trigger: GGGGTACAACCACCATGACAACTGCCGGGAGGGCCA...GCACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp AGGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCGGCCTGGGACAGGATaGAGGTATGTTGCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: RYVAASRAWGLLHEEYPSRPGTG*RYVAAS
Trigger: GGAGGCTGCAACATACCTCAATCCTGTCCCAGGCCG...GGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS TCA 90 bp TGCTCCTATCTCAAGAGCCACCTCCGAGAACCTCCTACCTGTGCCTaGGGAACAAACCACACTCTCTCTCCCTCGGCCCCCAGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: CSYLKSHLREPPTCA*GTNHTLSPSAPRLW
Trigger: CCAAAGCCTGGGGGCCGAGGGAGAGAGAGTGTGGTTTGTTCCTCAGGCACAGGTAGGAGGTTCTCGGAGGTGGCTCTTGAGATAGGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492464.1
ENST00000626587.1
CDS-3UTR CAA 90 bp GTGACCACGACCTGCGTGGCCCTCCCGGCAGTTGTCATGGTGGTTGTACCCCACCACACAAAGCCCGCTTaGAAGAAAAAGAGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: VTTTCVALPAVVMVVVPHHTKPA*KKKSSP
Trigger: AGGCGAGCTCTTTTTCTTCAAAGCGGGCTTTGTGTG...GTGGGGTACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCGTGGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp CAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCAGGTCAGAGGAAAGTGTaGGCAGGCTCGGCACAGCCA +
Preference number: 5 (lower is better)
Translates to: QCQPLEGTSQQGYSKDTPGQRKV*AGSAQP
Trigger: TGGCTGTGCCGAGCCTGCCAACACTTTCCTCTGACC...TGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp CAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCACAGTTGTCATGGTGGTaGTACCCCACCCCATCCCCC +
Preference number: 5 (lower is better)
Translates to: QCQPLEGTSQQGYSKDTPQLSWW*YPTPSP
Trigger: GGGGGATGGGGTGGGGTACAACCACCATGACAACTG...TGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp CCTTGCTTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGCGGCCTGGGACAGGATaGAGGTATGTTGCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: PCFSASPWKEPHNRDTARRPGTG*RYVAAS
Trigger: GGAGGCTGCAACATACCTCAATCCTGTCCCAGGCCG...CCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAAGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp GTTTGCCAGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCGGCCTGGGACAGGATaGAGGTATGTTGCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: VCQDLHSGPKTALPLKSCRPGTG*RYVAAS
Trigger: GGAGGCTGCAACATACCTCAATCCTGTCCCAGGCCG...GCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp TCTTCTCGGGACCCCAGACCAAGGCAGCATGGACCGGGAACCTCACCAGGCCCATCTCATCTCTGCCAGTaGAGGATGGAAATCCCAGCT +
Preference number: 5 (lower is better)
Translates to: SSRDPRPRQHGPGTSPGPSHLCQ*RMEIPA
Trigger: AGCTGGGATTTCCATCCTCAACTGGCAGAGATGAGA...TGGGCCTGGTGAGGTTCCCGGTCCATGCTGCCTTGGTCTGGGGTCCCGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS TCA 90 bp AGGGCTGGCCATATAGGTGTTGAACGCCCCTGCAGTCATCTGGGCTaGGACTCAGTGGGTAGCGAAAGGTGTAGAAGGCGGACATCAGGG +
Preference number: 5 (lower is better)
Translates to: RAGHIGVERPCSHLG*DSVGSERCRRRTSG
Trigger: CCCTGATGTCCGCCTTCTACACCTTTCGCTACCCACTGAGTCTCAGCCCAGATGACTGCAGGGGCGTTCAACACCTATATGGCCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000215743.8
ENST00000434318.1
ENST00000437086.5
ENST00000460352.1
ENST00000465385.5
ENST00000612388.3
ENST00000626399.1
ENST00000627283.1
ENST00000628530.2
ENST00000629514.2
CDS GCA 90 bp ACATCGCTCCATACCTTTAGGGCCTCTGCCATCGTCTGCCGCACCTaGTCCTGCACCAACTGCCATGGGAACCGAAGGATCCTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: TSLHTFRASAIVCRT*SCTNCHGNRRILFC
Trigger: ACAGAAGAGGATCCTTCGGTTCCCATGGCAGTTGGTGCAGGAGCAGGTGCGGCAGACGATGGCAGAGGCCCTAAAGGTATGGAGCGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS CCA 90 bp GGGGTTCAGTGGACACACAGGTCTGTTAGACACGAAGATCTACCCTaGCCTGTGTCTCAAGCAGCAGCTGTGAGGGCAGCTGGCTTACCC +
Preference number: 5 (lower is better)
Translates to: GVQWTHRSVRHEDLP*PVSQAAAVRAAGLP
Trigger: GGGTAAGCCAGCTGCCCTCACAGCTGCTGCTTGAGACACAGGCCAGGGTAGATCTTCGTGTCTAACAGACCTGTGTGTCCACTGAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465385.5
ENST00000465730.1
ENST00000628212.2
ENST00000628530.2
CDS-3UTR CAA 90 bp AGCCAGAAGGCAGACAGATGCAGGCACCTACCAAGACCTGACCTCAGGAAGTGGAACCTCTTCTGTCGGTaGCGGGCACTCAGCCCATCA +
Preference number: 5 (lower is better)
Translates to: SQKADRCRHLPRPDLRKWNLFCR*RALSPS
Trigger: TGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGTT...CCACTTCCTGAGGTCAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR CAA 90 bp AGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCAACCTCTTCTGTCGGTaGCGGGCACTCAGCCCATCA +
Preference number: 5 (lower is better)
Translates to: SPWKEPHNRDTARTLQFPNLFCR*RALSPS
Trigger: TGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGTT...GGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR CAA 90 bp TTCAGTGCCAGCCCCTGGAAGGAACCTCACAACAGGGATACAGCAAGGACACTCGGTCAGAGGAAAGTGTaGGCAGGCTCGGCACAGCCA +
Preference number: 5 (lower is better)
Translates to: FSASPWKEPHNRDTARTLGQRKV*AGSAQP
Trigger: TGGCTGTGCCGAGCCTGCCAACACTTTCCTCTGACC...GAGTGTCCTTGCTGTATCCCTGTTGTGAGGTTCCTTCCAGGGGCTGGCACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp TCCTGGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTCCAGTCAGTGGCCCTGACATTTACAATGGCTTaGGAGGATAGCAGTGCTGCG +
Preference number: 5 (lower is better)
Translates to: SWKAASISEGTPLQSVALTFTMA*EDSSAA
Trigger: CGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGT...CAGGGCCACTGACTGGAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CAA 90 bp CCCTTCCTCTTAAGTCATGCCAAAGCCTCCCTGCCCAGTCTGAGACAGTCGCTGATCCTCTTCTGTCGGTaGCGGGCACTCAGCCCATCA +
Preference number: 5 (lower is better)
Translates to: PFLLSHAKASLPSLRQSLILFCR*RALSPS
Trigger: TGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGAT...CAGCGACTGTCTCAGACTGGGCAGGGAGGCTTTGGCATGACTTAAGAGGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CAA 90 bp GGTATGTTGCAGCCTCCAGGGCCTGGGGTCTCCTGCATGAAGAATACCCCTCCCAACGCCAGTAGTCCCTaGGAAGAACCAAATGTGGCC +
Preference number: 5 (lower is better)
Translates to: GMLQPPGPGVSCMKNTPPNASSP*EEPNVA
Trigger: GGCCACATTTGGTTCTTCCAAGGGACTACTGGCGTT...GGGAGGGGTATTCTTCATGCAGGAGACCCCAGGCCCTGGAGGCTGCAACATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CAA 90 bp GTCTACACGCCGGGTGCTGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAATGGAAATCCCAGCTCTaGGAAGAACCAAATGTGGCC +
Preference number: 5 (lower is better)
Translates to: VYTPGAGVETPVVPASEEWKSQL*EEPNVA
Trigger: GGCCACATTTGGTTCTTCCAAGAGCTGGGATTTCCA...TTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS TCA 90 bp TTAGACACGAAGATCTACCCTGGCCTGTGTCTCAAGCAGCAGCTGTaGGGGCAGCTGGCTTACCCACGGACACACAGGTGGCATCCTAGT +
Preference number: 5 (lower is better)
Translates to: LDTKIYPGLCLKQQL*GQLAYPRTHRWHPS
Trigger: ACTAGGATGCCACCTGTGTGTCCGTGGGTAAGCCAGCTGCCCTCACAGCTGCTGCTTGAGACACAGGCCAGGGTAGATCTTCGTGTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465385.5
ENST00000465730.1
ENST00000628212.2
ENST00000628530.2
CDS-3UTR CAA 90 bp CCTCACAACAGGGATACAGCAAGGACACTCCAGTTCCCCCAGTCCTGCCATGGTAGCGGTGCAATCTCATaGGTGTCTATCCCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: PHNRDTARTLQFPQSCHGSGAIS*VSIPAW
Trigger: CCAGGCTGGGATAGACACCAATGAGATTGCACCGCT...ACCATGGCAGGACTGGGGGAACTGGAGTGTCCTTGCTGTATCCCTGTTGTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp TGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGTGGCCCTCCCGGCAGTaGTCATGGTGGTTGTACCCC +
Preference number: 5 (lower is better)
Translates to: WPGFWRTDFQDCQPEGRQWPSRQ*SWWLYP
Trigger: GGGGTACAACCACCATGACAACTGCCGGGAGGGCCA...CTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS GCA 90 bp CCTGGAACGAAGCTGCTAAAATTGCGAGGCCGCAGGCTTCAAACTTaGGCTAGATTTGACCGAGCCGGGCAAATGCTCCTAGGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: PGTKLLKLRGRRLQT*ARFDRAGQMLLGLW
Trigger: CCAAAGGCCTAGGAGCATTTGCCCGGCTCGGTCAAATCTAGCGCAAGTTTGAAGCCTGCGGCCTCGCAATTTTAGCAGCTTCGTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000465385.5
ENST00000477567.5
ENST00000489582.5
ENST00000628530.2
ENST00000628782.2
ENST00000628805.2
CDS-3UTR CAA 90 bp GGTCAGAGGAAAGTGTTGGCAGGCTCGGCACAGCCAAAGAAGTCAGGACCCACGCACACAAAGCCCGCTTaGAAGAAAAAGAGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: GQRKVLAGSAQPKKSGPTHTKPA*KKKSSP
Trigger: AGGCGAGCTCTTTTTCTTCAAAGCGGGCTTTGTGTG...CGTGGGTCCTGACTTCTTTGGCTGTGCCGAGCCTGCCAACACTTTCCTCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CAA 90 bp GTTTGCCAGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCAACGCCAGTAGTCCCTaGGAAGAACCAAATGTGGCC +
Preference number: 5 (lower is better)
Translates to: VCQDLHSGPKTALPLKSCNASSP*EEPNVA
Trigger: GGCCACATTTGGTTCTTCCAAGGGACTACTGGCGTT...GCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CAA 90 bp GTTTGCCAGGACCTGCATAGCGGGCCCAAGACTGCCCTTCCTCTTAAGTCATGCCACACAAAGCCCGCTTaGAAGAAAAAGAGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: VCQDLHSGPKTALPLKSCHTKPA*KKKSSP
Trigger: AGGCGAGCTCTTTTTCTTCAAAGCGGGCTTTGTGTG...GCATGACTTAAGAGGAAGGGCAGTCTTGGGCCCGCTATGCAGGTCCTGGCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp CTGTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTGCGGACATCAGGGCCTaGGCTGCTGTTGTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: LYTHLQWLWRIAVLRKGLADIRA*AAVVCC
Trigger: GCAGCACACAACAGCAGCCAAGGCCCTGATGTCCGC...AAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp TGGGGTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTAGCGGTGCAATCTCATaGGTGTCTATCCCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: WGGNASSPCLGRSRSCSSSGAIS*VSIPAW
Trigger: CCAGGCTGGGATAGACACCAATGAGATTGCACCGCT...AGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS GCA 90 bp GCAGGTTTCCCATGCTGTGCCTTCATTTGTGAAGTCCCTGGCATCTaGAATGCTCCAGGCTCTCATCTCTGCCAGTTGAGGATGGAAATC +
Preference number: 5 (lower is better)
Translates to: AGFPCCAFICEVPGI*NAPGSHLCQLRMEI
Trigger: GATTTCCATCCTCAACTGGCAGAGATGAGAGCCTGGAGCATTGCAGATGCCAGGGACTTCACAAATGAAGGCACAGCATGGGAAACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CAA 90 bp TGGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGCCAGTACTGAGCACCTaGGAAGAACCAAATGTGGCC +
Preference number: 5 (lower is better)
Translates to: WPGFWRTDFQDCQPEGRQPVLST*EEPNVA
Trigger: GGCCACATTTGGTTCTTCCAAGGTGCTCAGTACTGG...CTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR CAA 90 bp GTGGAAACGCCAGTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTCGGGTGGAAATCCCAGCTCTaGGAAGAACCAAATGTGGCC +
Preference number: 5 (lower is better)
Translates to: VETPVVPASEEVDLVLLGWKSQL*EEPNVA
Trigger: GGCCACATTTGGTTCTTCCAAGAGCTGGGATTTCCA...CCCGAGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CAA 90 bp GTAGTCCCTGCCTCGGAAGAAGTAGATCTTGTTCTTCTCGGGACCCCAGACCAATCTCATCTCTGCCAGTaGAGGATGGAAATCCCAGCT +
Preference number: 5 (lower is better)
Translates to: VVPASEEVDLVLLGTPDQSHLCQ*RMEIPA
Trigger: AGCTGGGATTTCCATCCTCAACTGGCAGAGATGAGA...TTGGTCTGGGGTCCCGAGAAGAACAAGATCTACTTCTTCCGAGGCAGGGACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS-3UTR CAA 90 bp GGCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGACACACAAAGCCCGCTTaGAAGAAAAAGAGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: GLDSGEQISRIVSQKADRHTKPA*KKKSSP
Trigger: AGGCGAGCTCTTTTTCTTCAAAGCGGGCTTTGTGTG...TCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp CTGTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTATCCTCTTCTGTCGGTaGCGGGCACTCAGCCCATCA +
Preference number: 5 (lower is better)
Translates to: LYTHLQWLWRIAVLRKGLILFCR*RALSPS
Trigger: TGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGAT...AAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437086.5
ENST00000629514.2
CDS-3UTR CAA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAAGCGGTGCAATCTCATaGGTGTCTATCCCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: PPHLTVNFLAWILENRFPSGAIS*VSIPAW
Trigger: CCAGGCTGGGATAGACACCAATGAGATTGCACCGCT...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp GTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCACCAGTACTGAGCACCTaGGAAGAACCAAATGTGGCC +
Preference number: 5 (lower is better)
Translates to: VHTFTMALEDSSAAKRASPVLST*EEPNVA
Trigger: GGCCACATTTGGTTCTTCCAAGGTGCTCAGTACTGG...TGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215743.8
ENST00000612388.3
CDS-3UTR CAA 90 bp GCCTGGATTCTGGAGAACAGATTTCCAGGATTGTCAGCCAGAAGGCAGACAGATACATTTACAATGGCTTaGGAGGATAGCAGTGCTGCG +
Preference number: 5 (lower is better)
Translates to: AWILENRFPGLSARRQTDTFTMA*EDSSAA
Trigger: CGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGT...ATCTGTCTGCCTTCTGGCTGACAATCCTGGAAATCTGTTCTCCAGAATCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS GCA 90 bp AGCGCACTGGTCTCCCTGGCCACATGGGCACATGTGTATGTGGTTTaGTCATACTTAGGCAAATACAAGTGTCTGAATTCAGTGGAAAGA +
Preference number: 5 (lower is better)
Translates to: SALVSLATWAHVYVV*SYLGKYKCLNSVER
Trigger: TCTTTCCACTGAATTCAGACACTTGTATTTGCCTAAGTATGAGCAAACCACATACACATGTGCCCATGTGGCCAGGGAGACCAGTGCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS-3UTR CAA 90 bp CCTCCCCATTTGACTGTGAACTTTTTGGCCTGGATTCTGGAGAACAGATTTCCAACATTTACAATGGCTTaGGAGGATAGCAGTGCTGCG +
Preference number: 5 (lower is better)
Translates to: PPHLTVNFLAWILENRFPTFTMA*EDSSAA
Trigger: CGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGT...TGGAAATCTGTTCTCCAGAATCCAGGCCAAAAAGTTCACAGTCAAATGGGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS-3UTR CAA 90 bp GTACACACATTTACAATGGCTTTGGAGGATAGCAGTGCTGCGAAAAGGGCTTCAACATTTACAATGGCTTaGGAGGATAGCAGTGCTGCG +
Preference number: 5 (lower is better)
Translates to: VHTFTMALEDSSAAKRASTFTMA*EDSSAA
Trigger: CGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGT...TGAAGCCCTTTTCGCAGCACTGCTATCCTCCAAAGCCATTGTAAATGTGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215743.8
ENST00000437086.5
ENST00000612388.3
ENST00000629514.2
CDS CCA 72 bp TCGAAGACGGGTTGGGACGCCCCCTCGTGGGAGTTCTaGGGATGGGTTGCTCCAGGCCTTCCCCAGGGCCGC +
Preference number: 6 (lower is better)
Translates to: SKTGWDAPSWEF*GWVAPGLPQGR
Trigger: GCGGCCCTGGGGAAGGCCTGGAGCAACCCATCCCCAGAACTCCCACGAGGGGGCGTCCCAACCCGTCTTCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS CCA 72 bp CAGGGCTGTGGCCCCCTCCTCTCGGCATGGAGGTGGTaGGCGTCCAGGCGACCTGTTCCATCATGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: QGCGPLLSAWRW*ASRRPVPSWVA
Trigger: GGCCACCCATGATGGAACAGGTCGCCTGGACGCCCACCACCTCCATGCCGAGAGGAGGGGGCCACAGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS CCA 72 bp CCTCTTCTGTCGGTTGCGGGCACTCAGCCCATCAGATaGGTCGGGCACGCCACAGCGGGGAGGCCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: PLLSVAGTQPIR*VGHATAGRPEA
Trigger: AGCCTCAGGCCTCCCCGCTGTGGCGTGCCCGACCCATCTGATGGGCTGAGTGCCCGCAACCGACAGAAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000215743.8
ENST00000428253.1
ENST00000437086.5
ENST00000460352.1
ENST00000465385.5
ENST00000465730.1
ENST00000477567.5
ENST00000489582.5
ENST00000612388.3
ENST00000626399.1
ENST00000628212.2
ENST00000628530.2
ENST00000628782.2
ENST00000628805.2
ENST00000629467.1
ENST00000629514.2
CDS CCA 72 bp GGTGGTGGGCGTCCAGGCGACCTGTTCCATCATGGGTaGCCCTGCAGAGCCACGATCCAGGCAGTGGCTCGC +
Preference number: 6 (lower is better)
Translates to: GGGRPGDLFHHG*PCRATIQAVAR
Trigger: GCGAGCCACTGCCTGGATCGTGGCTCTGCAGGGCCACCCATGATGGAACAGGTCGCCTGGACGCCCACCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS GCA 72 bp GGGCGTCCAGGCGACCTGTTCCATCATGGGTGGCCCTaGAGAGCCACGATCCAGGCAGTGGCTCGCATCCTG +
Preference number: 6 (lower is better)
Translates to: GRPGDLFHHGWP*RATIQAVARIL
Trigger: CAGGATGCGAGCCACTGCCTGGATCGTGGCTCTGCAGGGCCACCCATGATGGAACAGGTCGCCTGGACGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS CCA 72 bp GGCCAACAGTCGAAGACGGGTTGGGACGCCCCCTCGTaGGAGTTCTGGGGATGGGTTGCTCCAGGCCTTCCC +
Preference number: 6 (lower is better)
Translates to: GQQSKTGWDAPS*EFWGWVAPGLP
Trigger: GGGAAGGCCTGGAGCAACCCATCCCCAGAACTCCCACGAGGGGGCGTCCCAACCCGTCTTCGACTGTTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS CCA 72 bp TGGAGGTGGTGGGCGTCCAGGCGACCTGTTCCATCATaGGTGGCCCTGCAGAGCCACGATCCAGGCAGTGGC +
Preference number: 6 (lower is better)
Translates to: WRWWASRRPVPS*VALQSHDPGSG
Trigger: GCCACTGCCTGGATCGTGGCTCTGCAGGGCCACCCATGATGGAACAGGTCGCCTGGACGCCCACCACCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS CCA 72 bp GCGTCCACCTCACCAGGCGACCTGTTCCATCATGGGTaGCCCTGCAGAGCCACGATCCAGGCAGTGGCTCGC +
Preference number: 6 (lower is better)
Translates to: ASTSPGDLFHHG*PCRATIQAVAR
Trigger: GCGAGCCACTGCCTGGATCGTGGCTCTGCAGGGCCACCCATGATGGAACAGGTCGCCTGGTGAGGTGGACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477567.5
ENST00000628782.2
CDS CCA 72 bp GTGGGCGTCCACCTCACCAGGCGACCTGTTCCATCATaGGTGGCCCTGCAGAGCCACGATCCAGGCAGTGGC +
Preference number: 6 (lower is better)
Translates to: VGVHLTRRPVPS*VALQSHDPGSG
Trigger: GCCACTGCCTGGATCGTGGCTCTGCAGGGCCACCCATGATGGAACAGGTCGCCTGGTGAGGTGGACGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477567.5
ENST00000628782.2
CDS CCA 72 bp CAGGGCTGTGGCCCCCTCCTCTCGGCATGGAGGTGGTaGGCGTCCACCTCACCAGGCGACCTGTTCCATCAT +
Preference number: 6 (lower is better)
Translates to: QGCGPLLSAWRW*ASTSPGDLFHH
Trigger: ATGATGGAACAGGTCGCCTGGTGAGGTGGACGCCCACCACCTCCATGCCGAGAGGAGGGGGCCACAGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477567.5
ENST00000628782.2
CDS CAA 90 bp GTCTTCTCCCAGCGCCCGCCAGAAAGCACGAACCTCTTCTGTCGGTaGCGGGCACTCAGCCCATCAGATGGGTCGGGCACGCCACAGCGG +
Preference number: 6 (lower is better)
Translates to: VFSQRPPESTNLFCR*RALSPSDGSGTPQR
Trigger: CCGCTGTGGCGTGCCCGACCCATCTGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGTTCGTGCTTTCTGGCGGGCGCTGGGAGAAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000215743.8
ENST00000428253.1
ENST00000460352.1
ENST00000465385.5
ENST00000465730.1
ENST00000477567.5
ENST00000489582.5
ENST00000612388.3
ENST00000626399.1
ENST00000628212.2
ENST00000628530.2
ENST00000628782.2
ENST00000628805.2
ENST00000629467.1
CDS GCA 72 bp AGCGCCCGCCAGAAAGCACGAACCTCTTCTGTCGGTTaGGGGCACTCAGCCCATCAGATGGGTCGGGCACGC +
Preference number: 6 (lower is better)
Translates to: SARQKARTSSVG*GHSAHQMGRAR
Trigger: GCGTGCCCGACCCATCTGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGTTCGTGCTTTCTGGCGGGCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000215743.8
ENST00000428253.1
ENST00000460352.1
ENST00000465385.5
ENST00000465730.1
ENST00000477567.5
ENST00000489582.5
ENST00000612388.3
ENST00000626399.1
ENST00000628212.2
ENST00000628530.2
ENST00000628782.2
ENST00000628805.2
ENST00000629467.1
CDS CAA 72 bp CAGCGCCCGCCAGAAAGCACGAACCTCTTCTGTCGGTaGCGGGCACTCAGCCCATCAGATGGGTCGGGCACG +
Preference number: 6 (lower is better)
Translates to: QRPPESTNLFCR*RALSPSDGSGT
Trigger: CGTGCCCGACCCATCTGATGGGCTGAGTGCCCGCAACCGACAGAAGAGGTTCGTGCTTTCTGGCGGGCGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000215743.8
ENST00000428253.1
ENST00000460352.1
ENST00000465385.5
ENST00000465730.1
ENST00000477567.5
ENST00000489582.5
ENST00000612388.3
ENST00000626399.1
ENST00000628212.2
ENST00000628530.2
ENST00000628782.2
ENST00000628805.2
ENST00000629467.1
CDS CAA 90 bp CCGGGCTGCAGCTGGCCCCCACGGAGGCGCCACACAAAGCCCGCTTaGAAGAAAAAGAGCTCGCCTCGGATGGTGGAGACCGCGTCAAAG +
Preference number: 6 (lower is better)
Translates to: PGCSWPPRRRHTKPA*KKKSSPRMVETASK
Trigger: CTTTGACGCGGTCTCCACCATCCGAGGCGAGCTCTTTTTCTTCAAAGCGGGCTTTGTGTGGCGCCTCCGTGGGGGCCAGCTGCAGCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000215743.8
ENST00000434318.1
ENST00000437086.5
ENST00000465385.5
ENST00000492464.1
ENST00000493132.1
ENST00000612388.3
ENST00000626587.1
ENST00000627283.1
ENST00000628530.2
ENST00000629008.1
ENST00000629514.2
CDS TCA 72 bp GCTGGCCCCCACGGAGGCGCCACACAAAGCCCGCTTTaGAGAAAAAGAGCTCGCCTCGGATGGTGGAGACCG +
Preference number: 6 (lower is better)
Translates to: AGPHGGATQSPL*RKRARLGWWRP
Trigger: CGGTCTCCACCATCCGAGGCGAGCTCTTTTTCTTCAAAGCGGGCTTTGTGTGGCGCCTCCGTGGGGGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000215743.8
ENST00000434318.1
ENST00000437086.5
ENST00000465385.5
ENST00000492464.1
ENST00000493132.1
ENST00000612388.3
ENST00000626587.1
ENST00000627283.1
ENST00000628530.2
ENST00000629008.1
ENST00000629514.2
CDS TCA 72 bp CCCAGGACTGGCTTTTCACCGTCGTACACCCAGTACTaGGCACCACTCCCTGGGCCCCTGCAGGCTGGACTG +
Preference number: 6 (lower is better)
Translates to: PRTGFSPSYTQY*APLPGPLQAGL
Trigger: CAGTCCAGCCTGCAGGGGCCCAGGGAGTGGTGCTCAGTACTGGGTGTACGACGGTGAAAAGCCAGTCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480185.1
ENST00000628372.1
CDS TCA 72 bp GGGCGTCTGGCTGGGGTGGGAGAGAGGGACACATGCTaGGGGCATATGCTGCAGTCACAGTGGCCAGCAGAG +
Preference number: 6 (lower is better)
Translates to: GRLAGVGERDTC*GHMLQSQWPAE
Trigger: CTCTGCTGGCCACTGTGACTGCAGCATATGCCCTCAGCATGTGTCCCTCTCTCCCACCCCAGCCAGACGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493132.1
ENST00000629008.1
CDS GCA 72 bp ACCTCACCAGGCGACCTGTTCCATCATGGGTGGCCCTaGAGAGCCACGATCCAGGCAGTGGCTCGCATCCTG +
Preference number: 6 (lower is better)
Translates to: TSPGDLFHHGWP*RATIQAVARIL
Trigger: CAGGATGCGAGCCACTGCCTGGATCGTGGCTCTGCAGGGCCACCCATGATGGAACAGGTCGCCTGGTGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477567.5
ENST00000628782.2
CDS CCA 72 bp ACCAGCTGCCTCACCCCCAACGCACCATCAGCATCCTaGAAGGCAGCGTCGATCTCAGAGGGCACCCCTCTC +
Preference number: 6 (lower is better)
Translates to: TSCLTPNAPSAS*KAASISEGTPL
Trigger: GAGAGGGGTGCCCTCTGAGATCGACGCTGCCTTCCAGGATGCTGATGGTGCGTTGGGGGTGAGGCAGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000488363.1
ENST00000625962.1
CDS CAA 90 bp CACCTGCCCAGGGTCCTCCCAGGTCACCCAGTGAGATGCCCACTATaGCCTCTCCCCGCTTACCACTGTCTCCACCTGCTCGAAGCCCAA +
Preference number: 6 (lower is better)
Translates to: HLPRVLPGHPVRCPL*PLPAYHCLHLLEAQ
Trigger: TTGGGCTTCGAGCAGGTGGAGACAGTGGTAAGCGGGGAGAGGCAATAGTGGGCATCTCACTGGGTGACCTGGGAGGACCCTGGGCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS TCA 72 bp ATCCTAGTGTCCTGCTCCCAGGCCCCTACCTGTAGGTaGGGTCCGTCTTCTCCCAGCGCCCGCCAGAAAGCA +
Preference number: 6 (lower is better)
Translates to: ILVSCSQAPTCR*GPSSPSARQKA
Trigger: TGCTTTCTGGCGGGCGCTGGGAGAAGACGGACCTCACCTACAGGTAGGGGCCTGGGAGCAGGACACTAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000428253.1
ENST00000465385.5
ENST00000465730.1
ENST00000628212.2
ENST00000628530.2
ENST00000629467.1
CDS TCA 72 bp CCCATCACCTGCCCAGGGTCCTCCCAGGTCACCCAGTaGGATGCCCACTATTGCCTCTCCCCGCTTACCACT +
Preference number: 6 (lower is better)
Translates to: PITCPGSSQVTQ*DAHYCLSPLTT
Trigger: AGTGGTAAGCGGGGAGAGGCAATAGTGGGCATCTCACTGGGTGACCTGGGAGGACCCTGGGCAGGTGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS CCA 72 bp GGAGGTGGTGGGCGTCCTGGCACAGCGCAGTCTCACTaGGTTGTGGGTTCTGGCCGATTCTGGGCTTATTGG +
Preference number: 6 (lower is better)
Translates to: GGGGRPGTAQSH*VVGSGRFWAYW
Trigger: CCAATAAGCCCAGAATCGGCCAGAACCCACAACCCAGTGAGACTGCGCTGTGCCAGGACGCCCACCACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460352.1
ENST00000626399.1
CDS CCA 72 bp GCACTGCGTAAGGCTGCCAGCATTGGCAGCGCATTTTaGCCAACAGTCGAAGACGGGTTGGGACGCCCCCTC +
Preference number: 6 (lower is better)
Translates to: ALRKAASIGSAF*PTVEDGLGRPL
Trigger: GAGGGGGCGTCCCAACCCGTCTTCGACTGTTGGCCAAAATGCGCTGCCAATGCTGGCAGCCTTACGCAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS GCA 72 bp GCGAAAGGTGTAGAAGGCGGACATCAGGGCCTTGGCTaGTGTTGTGTGCTGCAGCCCCAGCACGTGGCCAAA +
Preference number: 6 (lower is better)
Translates to: AKGVEGGHQGLG*CCVLQPQHVAK
Trigger: TTTGGCCACGTGCTGGGGCTGCAGCACACAACAGCAGCCAAGGCCCTGATGTCCGCCTTCTACACCTTTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000215743.8
ENST00000434318.1
ENST00000437086.5
ENST00000460352.1
ENST00000465385.5
ENST00000477567.5
ENST00000612388.3
ENST00000626399.1
ENST00000627283.1
ENST00000628530.2
ENST00000628782.2
ENST00000629514.2
CDS GCA 72 bp GGGTGGGAGAGAGGGACACATGCTGAGGGCATATGCTaGAGTCACAGTGGCCAGCAGAGGAGTAGGGGGACT +
Preference number: 6 (lower is better)
Translates to: GWERGTHAEGIC*SHSGQQRSRGT
Trigger: AGTCCCCCTACTCCTCTGCTGGCCACTGTGACTGCAGCATATGCCCTCAGCATGTGTCCCTCTCTCCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493132.1
ENST00000629008.1
CDS CCA 72 bp CTGGCCTGTGTCTCAAGCAGCAGCTGTGAGGGCAGCTaGCTTACCCACGGACACACAGGTGGCATCCTAGTG +
Preference number: 6 (lower is better)
Translates to: LACVSSSSCEGS*LTHGHTGGILV
Trigger: CACTAGGATGCCACCTGTGTGTCCGTGGGTAAGCCAGCTGCCCTCACAGCTGCTGCTTGAGACACAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465385.5
ENST00000465730.1
ENST00000628212.2
ENST00000628530.2
CDS CCA 72 bp CGATGGCTGAGGCACCAGGAGTTGCCCCTGGATGCTTaGTGGGTGTGTGAACACTCAGGACACAGGCCAGGT +
Preference number: 6 (lower is better)
Translates to: RWLRHQELPLDA*WVCEHSGHRPG
Trigger: ACCTGGCCTGTGTCCTGAGTGTTCACACACCCACCAAGCATCCAGGGGCAACTCCTGGTGCCTCAGCCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS CAA 72 bp CATATCCCCCGCGGGCACTGCGTAAGGCTGCCAGCATaGGCAGCGCATTTTGGCCAACAGTCGAAGACGGGT +
Preference number: 6 (lower is better)
Translates to: HIPRGHCVRLPA*AAHFGQQSKTG
Trigger: ACCCGTCTTCGACTGTTGGCCAAAATGCGCTGCCAATGCTGGCAGCCTTACGCAGTGCCCGCGGGGGATATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS CAA 72 bp AGGGTCCTCCCAGGTCACCCAGTGAGATGCCCACTATaGCCTCTCCCCGCTTACCACTGTCTCCACCTGCTC +
Preference number: 6 (lower is better)
Translates to: RVLPGHPVRCPL*PLPAYHCLHLL
Trigger: GAGCAGGTGGAGACAGTGGTAAGCGGGGAGAGGCAATAGTGGGCATCTCACTGGGTGACCTGGGAGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS CAA 90 bp TGGCTCTGGGAAGTCTCTCGAGCAGATCCCCAACCCCCACTCACCTaGGAAGAACCAAATGTGGCCCTGGGCATCCTCGAAGGCAGCGTC +
Preference number: 6 (lower is better)
Translates to: WLWEVSRADPQPPLT*EEPNVALGILEGSV
Trigger: GACGCTGCCTTCGAGGATGCCCAGGGCCACATTTGGTTCTTCCAAGGTGAGTGGGGGTTGGGGATCTGCTCGAGAGACTTCCCAGAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492464.1
ENST00000626587.1
CDS TCA 72 bp GAGCCTGGTCCTCACAGGTCTCTTGTAAAGGCTGCCTaGGTGACTGAACACCCGTCCGCAGGCATGTGCTGC +
Preference number: 6 (lower is better)
Translates to: EPGPHRSLVKAA*VTEHPSAGMCC
Trigger: GCAGCACATGCCTGCGGACGGGTGTTCAGTCACTCAGGCAGCCTTTACAAGAGACCTGTGAGGACCAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS CAA 90 bp GCCCAGGACTGGCTTTTCACCGTCGTACACCCAGTACTGAGCACCTaGGAAGAACCAAATGTGGCCCTGGGCATCCTCGAAGGCAGCGTC +
Preference number: 6 (lower is better)
Translates to: AQDWLFTVVHPVLST*EEPNVALGILEGSV
Trigger: GACGCTGCCTTCGAGGATGCCCAGGGCCACATTTGGTTCTTCCAAGGTGCTCAGTACTGGGTGTACGACGGTGAAAAGCCAGTCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000215743.8
ENST00000465385.5
ENST00000488363.1
ENST00000493132.1
ENST00000612388.3
ENST00000625962.1
ENST00000628530.2
ENST00000629008.1
CDS CCA 72 bp TTGAACGCCCCTGCAGTCATCTGGGCTGAGACTCAGTaGGTAGCGAAAGGTGTAGAAGGCGGACATCAGGGC +
Preference number: 6 (lower is better)
Translates to: LNAPAVIWAETQ*VAKGVEGGHQG
Trigger: GCCCTGATGTCCGCCTTCTACACCTTTCGCTACCCACTGAGTCTCAGCCCAGATGACTGCAGGGGCGTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000215743.8
ENST00000434318.1
ENST00000437086.5
ENST00000460352.1
ENST00000465385.5
ENST00000477567.5
ENST00000612388.3
ENST00000626399.1
ENST00000627283.1
ENST00000628530.2
ENST00000628782.2
ENST00000629514.2
CDS CAA 72 bp GTGGTGGGCGTCCTGGCACAGCGCAGTCTCACTGGGTaGTGGGTTCTGGCCGATTCTGGGCTTATTGGTTTT +
Preference number: 6 (lower is better)
Translates to: VVGVLAQRSLTG*WVLADSGLIGF
Trigger: AAAACCAATAAGCCCAGAATCGGCCAGAACCCACAACCCAGTGAGACTGCGCTGTGCCAGGACGCCCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460352.1
ENST00000626399.1
CDS TCA 72 bp CCCAGGACTGGCTTTTCACCGTCGTACACCCAGTACTaGGCACCTTGGAAGAACCAAATGTGGCCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: PRTGFSPSYTQY*APWKNQMWPWA
Trigger: TGCCCAGGGCCACATTTGGTTCTTCCAAGGTGCTCAGTACTGGGTGTACGACGGTGAAAAGCCAGTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000215743.8
ENST00000465385.5
ENST00000488363.1
ENST00000493132.1
ENST00000612388.3
ENST00000625962.1
ENST00000628530.2
ENST00000629008.1
CDS CCA 72 bp AGATTTGACCGAGCCGGGCAAATGCTCCTAGGCCTTTaGGATAGACACGCTGCTCGGATGTCGCGTAAAGGC +
Preference number: 6 (lower is better)
Translates to: RFDRAGQMLLGL*DRHAARMSRKG
Trigger: GCCTTTACGCGACATCCGAGCAGCGTGTCTATCCCAAAGGCCTAGGAGCATTTGCCCGGCTCGGTCAAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000465385.5
ENST00000477567.5
ENST00000489582.5
ENST00000628530.2
ENST00000628782.2
ENST00000628805.2
CDS CAA 72 bp GAAGTCTCTCGAGCAGATCCCCAACCCCCACTCACCTaGGAAGAACCAAATGTGGCCCTGGGCATCCTCGAA +
Preference number: 6 (lower is better)
Translates to: EVSRADPQPPLT*EEPNVALGILE
Trigger: TTCGAGGATGCCCAGGGCCACATTTGGTTCTTCCAAGGTGAGTGGGGGTTGGGGATCTGCTCGAGAGACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492464.1
ENST00000626587.1
CDS CCA 72 bp GGGGGTTTGCCCATAGATGACCTCCCTGGGGTTCAGTaGACACACAGGTCTGTTAGACACGAAGATCTACCC +
Preference number: 6 (lower is better)
Translates to: GGLPIDDLPGVQ*THRSVRHEDLP
Trigger: GGGTAGATCTTCGTGTCTAACAGACCTGTGTGTCCACTGAACCCCAGGGAGGTCATCTATGGGCAAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465385.5
ENST00000465730.1
ENST00000628212.2
ENST00000628530.2
CDS CAA 72 bp TGGTGGGCGTCCTGGCCTGGAACGAAGCTGCTAAAATaGCGAGGCCGCAGGCTTCAAACTTGCGCTAGATTT +
Preference number: 6 (lower is better)
Translates to: WWASWPGTKLLK*RGRRLQTCARF
Trigger: AAATCTAGCGCAAGTTTGAAGCCTGCGGCCTCGCAATTTTAGCAGCTTCGTTCCAGGCCAGGACGCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489582.5
ENST00000628805.2
CDS CAA 72 bp TGGCTTTTCACCGTCGTACACCCAGTACTGAGCACCTaGGAAGAACCAAATGTGGCCCTGGGCATCCTCGAA +
Preference number: 6 (lower is better)
Translates to: WLFTVVHPVLST*EEPNVALGILE
Trigger: TTCGAGGATGCCCAGGGCCACATTTGGTTCTTCCAAGGTGCTCAGTACTGGGTGTACGACGGTGAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000215743.8
ENST00000465385.5
ENST00000488363.1
ENST00000493132.1
ENST00000612388.3
ENST00000625962.1
ENST00000628530.2
ENST00000629008.1
CDS CAA 72 bp CTCCACCTGCTCGAAGCCCAAGTTGTGATGGTAGAGTaGGACAATGACATGGCTGACACCCACCTCAGACTG +
Preference number: 6 (lower is better)
Translates to: LHLLEAQVVMVE*DNDMADTHLRL
Trigger: CAGTCTGAGGTGGGTGTCAGCCATGTCATTGTCCAACTCTACCATCACAACTTGGGCTTCGAGCAGGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS CAA 72 bp GGTCAGGAAGCCTGGCCTGGAACGAAGCTGCTAAAATaGCGAGGCCGCAGGCTTCAAACTTGCGCTAGATTT +
Preference number: 6 (lower is better)
Translates to: GQEAWPGTKLLK*RGRRLQTCARF
Trigger: AAATCTAGCGCAAGTTTGAAGCCTGCGGCCTCGCAATTTTAGCAGCTTCGTTCCAGGCCAGGCTTCCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477567.5
ENST00000628782.2
CDS CAA 90 bp GAAGTCCCTGGCATCTGCAATGCTCCAGGCTCTCATCTCTGCCAGTaGAGGATGGAAATCCCAGCTCTTGGAAGAACCAAATGTGGCCCT +
Preference number: 6 (lower is better)
Translates to: EVPGICNAPGSHLCQ*RMEIPALGRTKCGP
Trigger: AGGGCCACATTTGGTTCTTCCAAGAGCTGGGATTTCCATCCTCAACTGGCAGAGATGAGAGCCTGGAGCATTGCAGATGCCAGGGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS CAA 90 bp TACCACTGTCTCCACCTGCTCGAAGCCCAAGTTGTGATGGTAGAGTaGGACAATGACATGGCTGACACCCACCTCAGACTGACACAGAGG +
Preference number: 6 (lower is better)
Translates to: YHCLHLLEAQVVMVE*DNDMADTHLRLTQR
Trigger: CCTCTGTGTCAGTCTGAGGTGGGTGTCAGCCATGTCATTGTCCAACTCTACCATCACAACTTGGGCTTCGAGCAGGTGGAGACAGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS GCA 72 bp AAGCTGCTAAAATTGCGAGGCCGCAGGCTTCAAACTTaGGCTAGATTTGACCGAGCCGGGCAAATGCTCCTA +
Preference number: 6 (lower is better)
Translates to: KLLKLRGRRLQT*ARFDRAGQMLL
Trigger: TAGGAGCATTTGCCCGGCTCGGTCAAATCTAGCGCAAGTTTGAAGCCTGCGGCCTCGCAATTTTAGCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000465385.5
ENST00000477567.5
ENST00000489582.5
ENST00000628530.2
ENST00000628782.2
ENST00000628805.2
CDS CAA 72 bp GGCATCTGCAATGCTCCAGGCTCTCATCTCTGCCAGTaGAGGATGGAAATCCCAGCTCTTGGAAGAACCAAA +
Preference number: 6 (lower is better)
Translates to: GICNAPGSHLCQ*RMEIPALGRTK
Trigger: TTTGGTTCTTCCAAGAGCTGGGATTTCCATCCTCAACTGGCAGAGATGAGAGCCTGGAGCATTGCAGATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS TCA 72 bp GCATCTGCAATGCTCCAGGCTCTCATCTCTGCCAGTTaGGGATGGAAATCCCAGCTCTTGGAAGAACCAAAT +
Preference number: 6 (lower is better)
Translates to: ASAMLQALISAS*GWKSQLLEEPN
Trigger: ATTTGGTTCTTCCAAGAGCTGGGATTTCCATCCTCAACTGGCAGAGATGAGAGCCTGGAGCATTGCAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434318.1
ENST00000627283.1
CDS CAA 90 bp CAGCGCACTGGTCTCCCTGGCCACATGGGCACATGTGTATGTGGTTaGCTCATACTTAGGCAAATACAAGTGTCTGAATTCAGTGGAAAG +
Preference number: 6 (lower is better)
Translates to: QRTGLPGHMGTCVCG*LILRQIQVSEFSGK
Trigger: CTTTCCACTGAATTCAGACACTTGTATTTGCCTAAGTATGAGCAAACCACATACACATGTGCCCATGTGGCCAGGGAGACCAGTGCGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2
CDS GCA 72 bp GTCTCCCTGGCCACATGGGCACATGTGTATGTGGTTTaGTCATACTTAGGCAAATACAAGTGTCTGAATTCA +
Preference number: 6 (lower is better)
Translates to: VSLATWAHVYVV*SYLGKYKCLNS
Trigger: TGAATTCAGACACTTGTATTTGCCTAAGTATGAGCAAACCACATACACATGTGCCCATGTGGCCAGGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465385.5
ENST00000628530.2