RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MIB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101752

Ensembl transcript IDs: ENST00000261537.7, ENST00000577749.5, ENST00000578260.1, ENST00000578646.5

Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCCAAACTCTGCATGAGTCAGCCAGGTGCTCCCTCCTCACCAGGTaGTCTAGTGGGAAGAGATGGGTAGCCCATGGCATGGAAGGAAAG +
Preference number: 1 (lower is better)
Translates to: GQTLHESARCSLLTR*SSGKRWVAHGMEGK
Trigger: CTTTCCTTCCATGCCATGGGCTACCCATCTCTTCCCACTAGATCACCTGGTGAGGAGGGAGCACCTGGCTGACTCATGCAGAGTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR TCA 90 bp AAGGATTTGTTTAAGGAAAGTAGAGCTGGAGACCACACAATTCTCTaGTTGGCCAAACTCTGCATGAGTCAGCCAGGTGCTCCCTCCTCA +
Preference number: 1 (lower is better)
Translates to: KDLFKESRAGDHTIL*LAKLCMSQPGAPSS
Trigger: TGAGGAGGGAGCACCTGGCTGACTCATGCAGAGTTTGGCCAATCAGAGAATTGTGTGGTCTCCAGCTCTACTTTCCTTAAACAAATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR GCA 90 bp TGCTTCTTTGGCCCTTTAGATAGAGGTACCTTAACTGTAAACAACTaGAATGAGAGCCTTCTAGATGTGGACACTTATGCTGAATTGAAG +
Preference number: 1 (lower is better)
Translates to: CFFGPLDRGTLTVNN*NESLLDVDTYAELK
Trigger: CTTCAATTCAGCATAAGTGTCCACATCTAGAAGGCTCTCATTGCAGTTGTTTACAGTTAAGGTACCTCTATCTAAAGGGCCAAAGAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR TCA 90 bp TCAAGGCACTGGAGAATTACACAGATGGAGTTTCCAAAATATAACTaGCAATTGCTTGAACTGTTAAAAAGCCCTGAGTCAGAACTTTCA +
Preference number: 1 (lower is better)
Translates to: SRHWRITQMEFPKYN*QLLELLKSPESELS
Trigger: TGAAAGTTCTGACTCAGGGCTTTTTAACAGTTCAAGCAATTGTCAGTTATATTTTGGAAACTCCATCTGTGTAATTCTCCAGTGCCTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR CAA 90 bp ACTACAAAACCAGCCAGCAAAGCTCCCCATTGCTTTCACCAGGACTaGCAAAGGCAGCAAGGATTAAACAGCCAGAAACAGTGTAAGAGG +
Preference number: 2 (lower is better)
Translates to: TTKPASKAPHCFHQD*QRQQGLNSQKQCKR
Trigger: CCTCTTACACTGTTTCTGGCTGTTTAATCCTTGCTGCCTTTGCAAGTCCTGGTGAAAGCAATGGGGAGCTTTGCTGGCTGGTTTTGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR TCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCTGGCCAAACTCTGCATaGGTCAGCCAGGTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCWPNSA*VSQVLP
Trigger: AGGGAGCACCTGGCTGACTCATGCAGAGTTTGGCCA...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR CCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCGAGATGGGTAGCCCATaGCATGGAAGGAAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLEMGSP*HGRKGK
Trigger: TTTTCCTTTCCTTCCATGCCATGGGCTACCCATCTC...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCGAGAAAATGGTAGGGTaGGGGATACAGAGAGGAAAT +
Preference number: 2 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLEKMVG*GIQRGN
Trigger: ATTTCCTCTCTGTATCCCTCACCCTACCATTTTCTC...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR TCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATCTTTTATTTGATGCATaGCTTCTCAGAGAACCTGTT +
Preference number: 2 (lower is better)
Translates to: KHRHGIVETTKPASKAPHLLFDA*LLREPV
Trigger: AACAGGTTCTCTGAGAAGTCATGCATCAAATAAAAG...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR TCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCCCTGCCTCTTTTATTTaGTGCATGACTTCTCAGAGA +
Preference number: 2 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCPASFI*CMTSQR
Trigger: TCTCTGAGAAGTCATGCATCAAATAAAAGAGGCAGG...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR CCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCGCAATGTCATTTCACTaGTCAGATCAAGCCCAGATA +
Preference number: 2 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLAMSFH*SDQAQI
Trigger: TATCTGGGCTTGATCTGACCAGTGAAATGACATTGC...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR CCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTGGACAAACAGCAATTaGGCAACACATAGACAGTAT +
Preference number: 2 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLWTNSN*ATHRQY
Trigger: ATACTGTCTATGTGTTGCCCAATTGCTGTTTGTCCA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTGTACTTCACATGGCTaGACTGTATTCTTTAGAAAC +
Preference number: 2 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLCTSHG*TVFFRN
Trigger: GTTTCTAAAGAATACAGTTCAGCCATGTGAAGTACA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR CCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGAATTTTGCAGATCACTaGGATACTATGTACATCTGC +
Preference number: 2 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKNFADH*DTMYIC
Trigger: GCAGATGTACATAGTATCCCAGTGATCTGCAAAATT...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR CAA 90 bp GTTTACGTTTTTATACCAGAGTTTCACATACTACTAACCAGTAAATaGAGGCTCAATCTAAAGGATATTCCCCCTCACTGTAGTAAAGCA +
Preference number: 2 (lower is better)
Translates to: VYVFIPEFHILLTSK*RLNLKDIPPHCSKA
Trigger: TGCTTTACTACAGTGAGGGGGAATATCCTTTAGATTGAGCCTCAATTTACTGGTTAGTAGTATGTGAAACTCTGGTATAAAAACGTAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR TCA 72 bp CTGCATGAGTCAGCCAGGTGCTCCCTCCTCACCAGGTaGTCTAGTGGGAAGAGATGGGTAGCCCATGGCATG +
Preference number: 3 (lower is better)
Translates to: LHESARCSLLTR*SSGKRWVAHGM
Trigger: CATGCCATGGGCTACCCATCTCTTCCCACTAGATCACCTGGTGAGGAGGGAGCACCTGGCTGACTCATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR TCA 72 bp GAGACCACACAATTCTCTGATTGGCCAAACTCTGCATaGGTCAGCCAGGTGCTCCCTCCTCACCAGGTGATC +
Preference number: 3 (lower is better)
Translates to: ETTQFSDWPNSA*VSQVLPPHQVI
Trigger: GATCACCTGGTGAGGAGGGAGCACCTGGCTGACTCATGCAGAGTTTGGCCAATCAGAGAATTGTGTGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR CAA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCTGCTTTCACCAGGACTaGCAAAGGCAGCAAGGATTA +
Preference number: 3 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCCFHQD*QRQQGL
Trigger: TAATCCTTGCTGCCTTTGCAAGTCCTGGTGAAAGCA...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR GCA 72 bp GGCCCTTTAGATAGAGGTACCTTAACTGTAAACAACTaGAATGAGAGCCTTCTAGATGTGGACACTTATGCT +
Preference number: 3 (lower is better)
Translates to: GPLDRGTLTVNN*NESLLDVDTYA
Trigger: AGCATAAGTGTCCACATCTAGAAGGCTCTCATTGCAGTTGTTTACAGTTAAGGTACCTCTATCTAAAGGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR CCA 72 bp AACCTCAGAGGTCCAAATAGGGCAATGTCATTTCACTaGTCAGATCAAGCCCAGATAAGTAATCACAGAAAA +
Preference number: 3 (lower is better)
Translates to: NLRGPNRAMSFH*SDQAQISNHRK
Trigger: TTTTCTGTGATTACTTATCTGGGCTTGATCTGACCAGTGAAATGACATTGCCCTATTTGGACCTCTGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR CAA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCACAGACATGGAATTGTaGAGACTACAAAACCAGCCA +
Preference number: 3 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCTDMEL*RLQNQP
Trigger: TGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGT...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR CAA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGACCTGCCTCTTTTATTaGATGCATGACTTCTCAGAG +
Preference number: 3 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKTCLFY*MHDFSE
Trigger: CTCTGAGAAGTCATGCATCAAATAAAAGAGGCAGGT...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCGCACCATCTGGTATGTaGTATGTGTATGTTTTGAGT +
Preference number: 3 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLAPSGM*YVYVLS
Trigger: ACTCAAAACATACACATACAACATACCAGATGGTGC...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR CAA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCATGACCCAGCAAGTTTaGATATTTGAACCAGACACA +
Preference number: 3 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCMTQQV*IFEPDT
Trigger: TGTGTCTGGTTCAAATATCAAAACTTGCTGGGTCAT...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR CCA 72 bp AGAGGTTTAGCTAATGAGCAGGGTAACGAACCTAACTaGAAAAGTACTGCTAAGGGACATATAATAAGAGGT +
Preference number: 3 (lower is better)
Translates to: RGLANEQGNEPN*KSTAKGHIIRG
Trigger: ACCTCTTATTATATGTCCCTTAGCAGTACTTTTCCAGTTAGGTTCGTTACCCTGCTCATTAGCTAAACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR CAA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCATGTTATCAGGACCTTaGGATCTCTTCCTTTTAACT +
Preference number: 3 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCMLSGP*DLFLLT
Trigger: AGTTAAAAGGAAGAGATCCAAAGGTCCTGATAACAT...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR CAA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCCTACTAACCAGTAAATaGAGGCTCAATCTAAAGGAT +
Preference number: 3 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCLLTSK*RLNLKD
Trigger: ATCCTTTAGATTGAGCCTCAATTTACTGGTTAGTAG...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCCCTTTCTTAGACATTTaGTACATGTCGATCACAACT +
Preference number: 3 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLPFLDI*YMSITT
Trigger: AGTTGTGATCGACATGTACAAAATGTCTAAGAAAGG...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR-3UTR CAA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGGAAAAGGCATTAATTTaGCAGATCACTGGGATACTA +
Preference number: 3 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKEKALI*QITGIL
Trigger: TAGTATCCCAGTGATCTGCAAAATTAATGCCTTTTC...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR TCA 72 bp CCTGTTATCAACTCACTGTGTAAAACCACGATGAAATaGAGGATAACTGATCACAAAGAATTATGTCTTTTG +
Preference number: 3 (lower is better)
Translates to: PVINSLCKTTMK*RITDHKELCLL
Trigger: CAAAAGACATAATTCTTTGTGATCAGTTATCCTTCATTTCATCGTGGTTTTACACAGTGAGTTGATAACAGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATGGAGCCCAAAGCCGCTaGCCAGCTGTCGCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHGAQSR*PAVAAA
Trigger: CGCGGCGGCGACAGCTGGGCAGCGGCTTTGGGCTCC...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATCCGCCTCCTCCCCCGTaGGCAGCGGTGGTACCTCCC +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHPPPPP*AAVVPP
Trigger: GGGAGGTACCACCGCTGCCCACGGGGGAGGAGGCGG...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCAGGCCCCCTTCTCTCTaGCCCCGCACCAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLRPPSL*PRTSRR
Trigger: GCGGCGGCTGGTGCGGGGGCAGAGAGAAGGGGGCCT...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATAACTGCCGGCCTTTCTaGCACCCCGGCCCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHNCRPF*HPGPSL
Trigger: GAGCGAGGGGCCGGGGTGGCAGAAAGGCCGGCAGTT...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCCGAAGCTCCGGACGGTaGCCACATGGCCCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLRSSGR*PHGPRR
Trigger: GCGGCGAGGGCCATGTGGGCACCGTCCGGAGCTTCG...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGGCGCGCTGTCCAGGATaGGGAGGTCGTAAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKARCPG*GGRKPR
Trigger: CCGGGGCTTACGACCTCCGCATCCTGGACAGCGCGC...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATCACATGGTTCCATCATaGTTGATGCCGGTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHHMVPS*LMPVGA
Trigger: CGCGCCCACCGGCATCAAGCATGATGGAACCATGTG...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATTGCGCTATGTGGGCTTaGTGCACTCCAGTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHCAMWA*CTPVLD
Trigger: ATCCAGGACTGGAGTGCATCAAGCCCACATAGCGCA...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCGGGAGCAAGCTTAACTaGCGGCCTTTCTGCCACCCC +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCGSKLN*RPFCHP
Trigger: GGGGTGGCAGAAAGGCCGGCAGTTAAGCTTGCTCCC...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATTGCACTCTTCTTCTCTaGCCCCTGGGTACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHCTLLL*PLGTKS
Trigger: GGACTTGGTACCCAGGGGGCAGAGAAGAAGAGTGCA...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGCGGAGCAGCGGTAGTTaGCAGCTGTGCCGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKRSSGS*QLCRCP
Trigger: GGGACAACGGCACAGCTGCCAACTACCGCTGCTCCG...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATCCATTTCCTCCATCTTaGTCTTCCCACTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHPFPPS*SSHCQS
Trigger: GGACTGGCAGTGGGAAGATCAAGATGGAGGAAATGG...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGCCTCCTTCTGCACCCTaGGCAGCATCTCCACTTCGG +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKPPSAP*AASPLR
Trigger: CCGAAGTGGAGATGCTGCTCAGGGTGCAGAAGGAGG...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATTTCCTGTTGCCATTCTaGTCACCTAGCACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHFLLPF*SPSTGQ
Trigger: CTGCCCTGTGCTAGGTGAGCAGAATGGCAACAGGAA...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGCGAGGTGCCTCCTTCTaGACCCTGAGCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKRGASF*TLSSIS
Trigger: GGAGATGCTGCTCAGGGTGCAGAAGGAGGCACCTCG...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCTCCCTCCTCACCAGGTaGTCTAGTGGGAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCSLLTR*SSGKRW
Trigger: CCATCTCTTCCCACTAGATCACCTGGTGAGGAGGGA...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGTGGCCAAACTCTGCATaGGTCAGCCAGGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKWPNSA*VSQVLP
Trigger: AGGGAGCACCTGGCTGACTCATGCAGAGTTTGGCCA...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATACCAGGTCACCAATCTaGAATCCACCAGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHTRSPI*NPPGFL
Trigger: CAGGAATCCTGGTGGATTGCAGATTGGTGACCTGGT...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCCTTGAAACTGCGAGGTaGCTCCTTCTGCACCCTGAG +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCLETAR*LLLHPE
Trigger: CTCAGGGTGCAGAAGGAGGCACCTCGCAGTTTCAAG...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCCTCCTCGCACCACTCTaGCACCTGCAAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLLLAPL*HLQRFL
Trigger: GAGGAATCTTTGCAGGTGCCAGAGTGGTGCGAGGAG...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATCCTCCCTTGGCATCCTaGACACATTTCAGATCAGAC +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHPPLAS*THFRSD
Trigger: GTCTGATCTGAAATGTGTCCAGGATGCCAAGGGAGG...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATGCTTGCATAGCTGTGTaGCCAGCACATTGCCCATTT +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHACIAV*PAHCPF
Trigger: AAATGGGCAATGTGCTGGCCACACAGCTATGCAAGC...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGTCCATCGAATGCCAATaGTTGGTTGCTGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKSIECQ*LVAGGR
Trigger: CCTGCCGCCAGCAACCAATCATTGGCATTCGATGGA...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCACAAGATCACCCACTTaGAACTGCGAGGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCTRSPT*NCEVPP
Trigger: AGGAGGCACCTCGCAGTTTCAAGTGGGTGATCTTGT...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATTCAGCCACTTCTACGTaGTTATTAAGGGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHSATST*LLRAAR
Trigger: TCTGGCTGCCCTTAATAATCACGTAGAAGTGGCTGA...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATTCCCCATCCTTATCCTaGATATCAAGCTTGGCACCT +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHSPSLS*ISSLAP
Trigger: AGGTGCCAAGCTTGATATTCAGGATAAGGATGGGGA...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGGGTAGTTGGCAGCTGTaGCGTTGTCCCACACTACCA +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKGSWQL*RCPTLP
Trigger: TGGTAGTGTGGGACAACGGCACAGCTGCCAACTACC...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATGTGTGGCCAGCACATTaGCCATTTACATCCACATCT +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHVWPAH*PFTSTS
Trigger: AGATGTGGATGTAAATGGGCAATGTGCTGGCCACAC...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATACTTTGCCAGTGCTTTaGAGAGATTCGGATCAGGAC +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHTLPVL*RDSDQD
Trigger: GTCCTGATCCGAATCTCTGCAAAGCACTGGCAAAGT...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATAAACACGCATTGCACTaGGATTTCCCCTTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHKHALH*DFPLVQ
Trigger: CTGCACTAAGGGGAAATCCCAGTGCAATGCGTGTTT...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATCCTGAATATCAAGCTTaGCACCTGCACGGACCAAAA +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHPEYQA*HLHGPK
Trigger: TTTTGGTCCGTGCAGGTGCCAAGCTTGATATTCAGG...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCATGCCAATGATTGGTTaGTGGCGGCAGGTATCACAC +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLMPMIG*WRQVSH
Trigger: GTGTGATACCTGCCGCCAGCAACCAATCATTGGCAT...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGCACCACTCTGGCACCTaGAAAGATTCCTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKHHSGT*KDSSGC
Trigger: ACAGCCAGAGGAATCTTTGCAGGTGCCAGAGTGGTG...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCACAGGCAATAGATGCTaGACTCTTCTTCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLTGNRC*TLLLCP
Trigger: GGGGCAGAGAAGAAGAGTGCAGCATCTATTGCCTGT...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCTCAGGTCAGCACCATTaGCTGCCAAGAAACAGGCAA +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCSGQHH*LPRNRQ
Trigger: TTGCCTGTTTCTTGGCAGCCAATGGTGCTGACCTGA...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTCTAGTGGGAAGAGATaGGTAGCCCATGGCATGGAA +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLSSGKR*VAHGME
Trigger: TTCCATGCCATGGGCTACCCATCTCTTCCCACTAGA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR CAA 72 bp ATGATAGCAGTTACTCAGCTAAACACAGACATGGAATaGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: MIAVTQLNTDME*LRLQNQPAKLP
Trigger: GGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTTAGCTGAGTAACTGCTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGTCAGTCCATCCTCCATaGCCATGCTGCAAAGACTGT +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKSVHPP*PCCKDC
Trigger: ACAGTCTTTGCAGCATGGTCATGGAGGATGGACTGA...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCCCAAAAGCTGCATGGTaGACTGCTCTATCACCATCT +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCPKAAW*TALSPS
Trigger: AGATGGTGATAGAGCAGTTCACCATGCAGCTTTTGG...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTTATTGACAGCAATATaGAGTGGTGTCTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLLLTAI*SGVCRR
Trigger: GCGCCGACAGACACCACTTCATATTGCTGTCAATAA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCTCCTGGAGACTGGGATaGCAGCCAAAGTCCAATAAA +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCSWRLG*QPKSNK
Trigger: TTTATTGGACTTTGGCTGTCATCCCAGTCTCCAGGA...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCCCCCTTAGTGCAGCATaGTGCAGAGCATTAAATCCA +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLPLSAA*CRALNP
Trigger: TGGATTTAATGCTCTGCATCATGCTGCACTAAGGGG...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATAGATCAAGTGGCGATTaGCCCTTCTTATTTCGAATG +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHRSSGD*PFLFRM
Trigger: CATTCGAAATAAGAAGGGTCAATCGCCACTTGATCT...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCATCAGTGGCATCTTCTaGACTTTTCCCTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLISGIF*TFPSTA
Trigger: TGCTGTGGAGGGAAAAGTTCAGAAGATGCCACTGAT...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATATTTCAGATCAGACATaGCCTCAAAGCCAACTCTGT +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHISDQT*PQSQLC
Trigger: ACAGAGTTGGCTTTGAGGGCATGTCTGATCTGAAAT...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGATCAAGCTTGGCACCTaGACGGACCAAAAGCCTAAC +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKIKLGT*TDQKPN
Trigger: GTTAGGCTTTTGGTCCGTGCAGGTGCCAAGCTTGAT...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGCCAATGATTGGTTGCTaGCGGCAGGTATCACACATG +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKPMIGC*RQVSHM
Trigger: CATGTGTGATACCTGCCGCCAGCAACCAATCATTGG...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGTCGAATGCCAATGATTaGTTGCTGGCGGCAGGTATC +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKSNAND*LLAAGI
Trigger: GATACCTGCCGCCAGCAACCAATCATTGGCATTCGA...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCGACAGCAATATGAAGTaGTGTCTGTCGGCGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLDSNMK*CLSALV
Trigger: AACAAGCGCCGACAGACACCACTTCATATTGCTGTC...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATTTATTAACGTGTTTTTaGATGGCTCCCAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHLLTCF*MAPRQH
Trigger: ATGCTGCCTGGGAGCCATCCAAAAACACGTTAATAA...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATGGTAACGAACCTAACTaGAAAAGTACTGCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHGNEPN*KSTAKG
Trigger: TCCCTTAGCAGTACTTTTCCAGTTAGGTTCGTTACC...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261537.7
3UTR CAA 72 bp ATAGCAGTTACTCAGCTAAACACAGACATGGAATTGTaGAGACTACAAAACCAGCCAGCAAAGCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: IAVTQLNTDMEL*RLQNQPAKLPI
Trigger: AATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTTAGCTGAGTAACTGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGAAAGGAGGAGAAAACTaGTCCCTAAGCGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKKGGEN*SLSVSP
Trigger: TGGAGAGACGCTTAGGGATCAGTTTTCTCCTCCTTT...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTCAACATGTCCATTCTaGCTAGCAGCTTGCATAGCT +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLSTCPF*LAACIA
Trigger: AGCTATGCAAGCTGCTAGTCAGAATGGACATGTTGA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGCTCCGAGAACCCACTTaGCCACTGACTTTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKLREPT*PLTFSL
Trigger: TAAGGAAAAAGTCAGTGGTCAAGTGGGTTCTCGGAG...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGATGTGGCCACAGGGTTaGAAAAGAACAGCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKMWPQG*KRTAAF
Trigger: GAAAGCAGCTGTTCTTTTTCAACCCTGTGGCCACAT...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATGTCTGTCTCTTTATGTaGACATCATCAGTCAGATGT +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHVCLFM*TSSVRC
Trigger: ACATCTGACTGATGATGTTCACATAAAGAGACAGAC...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGTGCCACCTTGGAAACTaGTGCTGGATTGTATGTCCA +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKCHLGN*CWIVCP
Trigger: TGGACATACAATCCAGCAGCAGTTTCCAAGGTGGCA...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGTGCCTTAGAGCTTCATaGAAAGGAGTATCCCCATCC +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKCLRAS*KGVSPS
Trigger: GGATGGGGATACTCCTTTGCATGAAGCTCTAAGGCA...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGGTCAGCACCATTGGCTaGCAAGAAACAGGCAATAGA +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKVSTIG*QETGNR
Trigger: TCTATTGCCTGTTTCTTGGCAGCCAATGGTGCTGAC...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCCCTTCTTATTTCGAATaGTCAGGTCAGCACCATTGG +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLPSYFE*SGQHHW
Trigger: CCAATGGTGCTGACCTGAGCATTCGAAATAAGAAGG...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCATGACACTTTGCCAGTaGTTTGCAGAGATTCGGATC +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCMTLCQ*FAEIRI
Trigger: GATCCGAATCTCTGCAAAGCACTGGCAAAGTGTCAT...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATTTCCTTATGACACTTTaGCAGTGCTTTGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHFLMTL*QCFAEI
Trigger: AATCTCTGCAAAGCACTGGCAAAGTGTCATAAGGAA...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCACTACTGCTCGACACTaGACACACTTTTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCTTARH*THFFIR
Trigger: CCTGATGAAAAAGTGTGTGCAGTGTCGAGCAGTAGT...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTCTTCGTTCAACTACTaGTCGACACTGCACACACTT +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLSSFNY*STLHTL
Trigger: AAGTGTGTGCAGTGTCGAGCAGTAGTTGAACGAAGA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCAGAAAGAACCTCCCTTaGCATCCTGGACACATTTCA +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLRKNLP*HPGHIS
Trigger: TGAAATGTGTCCAGGATGCCAAGGGAGGTTCTTTCT...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGTTCTTCTCTGCCCCCTaGGTACCAAGTCCCATTATT +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKFFSAP*VPSPII
Trigger: AATAATGGGACTTGGTACCCAGGGGGCAGAGAAGAA...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATTGGACAAACAGCAATTaGGCAACACATAGACAGTAT +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHWTNSN*ATHRQY
Trigger: ATACTGTCTATGTGTTGCCCAATTGCTGTTTGTCCA...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCAACCCACTTGACCACTaGCTTTTTCCTTATGACACT +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLNPLDH*LFPYDT
Trigger: AGTGTCATAAGGAAAAAGTCAGTGGTCAAGTGGGTT...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCATCTCTCTTCATATCTaGGCACACCATACACTCTTC +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLISLHI*AHHTLF
Trigger: GAAGAGTGTATGGTGTGCTCAGATATGAAGAGAGAT...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCCCTGCCTCTTTTATTTaGTGCATGACTTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLPASFI*CMTSQR
Trigger: TCTCTGAGAAGTCATGCATCAAATAAAAGAGGCAGG...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGCAGACATGGAATTGTTaGGACTACAAAACCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKQTWNC*DYKTSQ
Trigger: CTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTG...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATTGTACTTCACATGGCTaGACTGTATTCTTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHCTSHG*TVFFRN
Trigger: GTTTCTAAAGAATACAGTTCAGCCATGTGAAGTACA...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTGTAAACAACTGCAATaGGAGCCTTCTAGATGTGGA +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLCKQLQ*EPSRCG
Trigger: TCCACATCTAGAAGGCTCTCATTGCAGTTGTTTACA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCTTCATCTCCAAAAGCTaGATGGTGAACTGCTCTATC +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCFISKS*MVNCSI
Trigger: GATAGAGCAGTTCACCATGCAGCTTTTGGAGATGAA...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATACGTTTCTTACTTATTaGATCATGAAGAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHTFLTY*IMKRGI
Trigger: GATACCCCTCTTCATGATGCAATAAGTAAGAAACGT...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTGTGATGGTAACATCTaGTCCAGCTTCCAAAAGAAC +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLCDGNI*SSFQKN
Trigger: GTTCTTTTGGAAGCTGGAGCAGATGTTACCATCACA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCCTGGATATCCAGGTTTaGATTACCCTGATGTACCAA +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLLDIQV*ITLMYQ
Trigger: TTGGTACATCAGGGTAATGCAAACCTGGATATCCAG...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGGAAACAGGCAATAGATaGTGCACTCTTCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKETGNR*CTLLLC
Trigger: GCAGAGAAGAAGAGTGCAGCATCTATTGCCTGTTTC...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCCCACCTATTGCCACTTaGATACTGTACTACAATGTC +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLPPIAT*ILYYNV
Trigger: GACATTGTAGTACAGTATCCAAGTGGCAATAGGTGG...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATTGTTGGTTCACATTCTaGATATCCAGGTTTGCATTA +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHCWFTF*ISRFAL
Trigger: TAATGCAAACCTGGATATCCAGAATGTGAACCAACA...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCGCAATGTCATTTCACTaGTCAGATCAAGCCCAGATA +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCAMSFH*SDQAQI
Trigger: TATCTGGGCTTGATCTGACCAGTGAAATGACATTGC...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGGTCCAGAATTCAGAGTaGACAAACAGCAATTGGGCA +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKVQNSE*TNSNWA
Trigger: TGCCCAATTGCTGTTTGTCCACTCTGAATTCTGGAC...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCGAAGATGACCTTTATTaGCAGCAATATGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLEDDLY*QQYEVV
Trigger: CACCACTTCATATTGCTGTCAATAAAGGTCATCTTC...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTTACTTATTGCATCATaGAGAGGGGTATCACCTTCA +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLLLIAS*RGVSPS
Trigger: TGAAGGTGATACCCCTCTTCATGATGCAATAAGTAA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGTGGAATATTCCCACTTaGGATATCATCAGTGGCATC +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKWNIPT*DIISGI
Trigger: GATGCCACTGATGATATCTCAAGTGGGAATATTCCA...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGGGCACCAAATTAATGTaGCAAGTCACTTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKGTKLM*QVTSPV
Trigger: TACAGGAGAAGTGACTTGTCACATTAATTTGGTGCC...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCTGTGGACACTTATGCTaGATTGAAGATGTACATCCT +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCCGHLC*IEDVHP
Trigger: AGGATGTACATCTTCAATTCAGCATAAGTGTCCACA...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCATAATTTGTACACTCTaGACACTTCCATCGAATGCC +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCIICTL*TLPSNA
Trigger: GGCATTCGATGGAAGTGTGCAGAGTGTACAAATTAT...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGACCATCTTTATCCTCTaGTTCGACATCCACGTTTTG +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKTIFIL*FDIHVL
Trigger: CAAAACGTGGATGTCGAAGCAGAGGATAAAGATGGT...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGAGCTGCATGGTGAACTaGTCTATCACCATCTTTATC +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKSCMVN*SITIFI
Trigger: GATAAAGATGGTGATAGAGCAGTTCACCATGCAGCT...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTCTTGTAACTGTTGCTaGAACTTTTGCACATCTGCA +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLSCNCC*NFCTSA
Trigger: TGCAGATGTGCAAAAGTTGCAGCAACAGTTACAAGA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCACAGGGCACATTGTCTaGTCTTTAATGTCTTGTAAC +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLTGHIV*SLMSCN
Trigger: GTTACAAGACATTAAAGAGCAGACAATGTGCCCTGT...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGCTGAGTGTGCTAAGATaGCATTTTTCCACTGTTGTG +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKLSVLR*HFSTVV
Trigger: CACAACAGTGGAAAAATGGCATCTTAGCACACTCAG...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGCTGATATTTAAAATGTaGCTCTCCCCTCTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKLIFKM*LSPLAQ
Trigger: TTGAGCCAGAGGGGAGAGGCACATTTTAAATATCAG...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATCCTGAAATTATAGATTaGAGACAAAATGGCACGTTT +
Preference number: 4 (lower is better)
Translates to: KHRHGIVETTKPASKAPHPEIID*RQNGTF
Trigger: AAACGTGCCATTTTGTCTGCAATCTATAATTTCAGG...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGTGTAGGGCAGTTTGTTaGTTCACATTCTGGATATCC +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKCRAVC*FTFWIS
Trigger: GGATATCCAGAATGTGAACCAACAAACTGCCCTACA...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGAGGACAGAGATCAAGTaGCGATTGACCCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKRTEIK*RLTLLI
Trigger: AATAAGAAGGGTCAATCGCCACTTGATCTCTGTCCT...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTGTACTACAATGTCATaGTCTTCATCAATGCCACAA +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLCTTMS*SSSMPQ
Trigger: TTGTGGCATTGATGAAGATCATGACATTGTAGTACA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCCTTTTATTTGATGCATaGCTTCTCAGAGAACCTGTT +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLLLFDA*LLREPV
Trigger: AACAGGTTCTCTGAGAAGTCATGCATCAAATAAAAG...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCCACTATGTAAACACCTaGTATAATCTAGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCHYVNT*YNLAAM
Trigger: CATTGCTGCTAGATTATATCAGGTGTTTACATAGTG...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCGCAAGTTTTGATATTTaGACCAGACACATCTTAAGC +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLASFDI*TRHILS
Trigger: GCTTAAGATGTGTCTGGTTCAAATATCAAAACTTGC...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTTCAGTTTTGCAAGATaGAAAAGTTCTGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLFSFAR*KSSGDL
Trigger: CAGATCTCCAGAACTTTTTCATCTTGCAAAACTGAA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGAGGAAAAACCTGACATaGTGTTTTCATGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKRKNLT*CFHVCN
Trigger: GTTGCAGACATGAAAACAGCATGTCAGGTTTTTCCT...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCAGCAATATGTCCACATaGACCAAAAAGAGTATCTCT +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCSNMST*TKKSIS
Trigger: AGAGATACTCTTTTTGGTCCATGTGGACATATTGCT...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCCTTCAATCTTTGTCCTaGATTGAACCTGTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCLQSLS*IEPVLY
Trigger: GTAAAGAACAGGTTCAATCCAGGACAAAGATTGAAG...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCAATTTTGCAGATCACTaGGATACTATGTACATCTGC +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLNFADH*DTMYIC
Trigger: GCAGATGTACATAGTATCCCAGTGATCTGCAAAATT...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGTTTGCACATCTGCATTaGCATTGGTATTATCCTTGT +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKFAHLH*HWYYPC
Trigger: ACAAGGATAATACCAATGTCAATGCAGATGTGCAAA...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR TCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGACTGTTAAAAAGCCCTaGGTCAGAACTTTCAATAAC +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKTVKKP*VRTFNN
Trigger: GTTATTGAAAGTTCTGACTCAGGGCTTTTTAACAGT...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTCGACATCCACGTTTTaGTTCAAAAGTAACTTCAAA +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLSTSTF*FKSNFK
Trigger: TTTGAAGTTACTTTTGAAGCAAAACGTGGATGTCGA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGATGTCTTGTAACTGTTaGTGCAACTTTTGCACATCT +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKMSCNC*CNFCTS
Trigger: AGATGTGCAAAAGTTGCAGCAACAGTTACAAGACAT...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTTCAATATGCTAAAATaGTCTTACAGGCTAACACCA +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLFNMLK*SYRLTP
Trigger: TGGTGTTAGCCTGTAAGAGCATTTTAGCATATTGAA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGCAAACCCAGCACACATaGAGAATCATTATTAACAAG +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKQTQHT*RIIINK
Trigger: CTTGTTAATAATGATTCTGCATGTGTGCTGGGTTTG...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTTAACTGTAAACAACTaGAATGAGAGCCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLLTVNN*NESLLD
Trigger: ATCTAGAAGGCTCTCATTGCAGTTGTTTACAGTTAA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGTTGAGATATCATCAGTaGCATCTTCTGAACTTTTCC +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKLRYHQ*HLLNFS
Trigger: GGAAAAGTTCAGAAGATGCCACTGATGATATCTCAA...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR GCA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGCATGACCTTAGATCTTaGAAACACAAACAACTAAAG +
Preference number: 4 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKHDLRS*KHKQLK
Trigger: CTTTAGTTGTTTGTGTTTGCAAGATCTAAGGTCATG...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS CCA 90 bp CCATCACCCGGTTATTCCGGGAGTTACTCATCGGGGCCCGGGCGGTaGGCTCCGCCGCTGCCGCCGCCGCCGCCGCCGCTGCCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: PSPGYSGSYSSGPGR*APPLPPPPPPLPPG
Trigger: CCCCGGCGGCAGCGGCGGCGGCGGCGGCGGCAGCGGCGGAGCCCACCGCCCGGGCCCCGATGAGTAACTCCCGGAATAACCGGGTGATGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS CCA 90 bp CGCTGTCCAGGATGCGGAGGTCGTAAGCCCCGGAGCAGCGGTAGTTaGCAGCTGTGCCGTTGTCCCACACTACCACCACCTCCTCGGGGC +
Preference number: 5 (lower is better)
Translates to: RCPGCGGRKPRSSGS*QLCRCPTLPPPPRG
Trigger: GCCCCGAGGAGGTGGTGGTAGTGTGGGACAACGGCACAGCTGCCAACTACCGCTGCTCCGGGGCTTACGACCTCCGCATCCTGGACAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS GCA 90 bp GGATGCGGAGGTCGTAAGCCCCGGAGCAGCGGTAGTTGGCAGCTGTaGCGTTGTCCCACACTACCACCACCTCCTCGGGGCTCTCGAAGC +
Preference number: 5 (lower is better)
Translates to: GCGGRKPRSSGSWQL*RCPTLPPPPRGSRS
Trigger: GCTTCGAGAGCCCCGAGGAGGTGGTGGTAGTGTGGGACAACGGCACAGCTGCCAACTACCGCTGCTCCGGGGCTTACGACCTCCGCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS CCA 90 bp ACCTTCTCAGAGTGTCTAGGAGGGGGATCCTCGGCAATAATAGAGTaGGAAGGCTTCCAGAGAGCCGCGCGATCGCGGGAAGAAAGGAGG +
Preference number: 5 (lower is better)
Translates to: TFSECLGGGSSAIIE*EGFQRAARSREERR
Trigger: CCTCCTTTCTTCCCGCGATCGCGCGGCTCTCTGGAAGCCTTCCCACTCTATTATTGCCGAGGATCCCCCTCCTAGACACTCTGAGAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS TCA 90 bp TCCTGGATTTCTGTTACCTTTCCCCTACGTCCATTTCCTCCATCTTaGTCTTCCCACTGCCAGTCCACTCCTCGCACCACTCTGGCACCT +
Preference number: 5 (lower is better)
Translates to: SWISVTFPLRPFPPS*SSHCQSTPRTTLAP
Trigger: AGGTGCCAGAGTGGTGCGAGGAGTGGACTGGCAGTGGGAAGATCAAGATGGAGGAAATGGACGTAGGGGAAAGGTAACAGAAATCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS TCA 90 bp CTTAGCACCATTATCCCAGAGGACATATGCTGCGCTATGTGGGCTTaGTGCACTCCAGTCCTGGATTTCTGTTACCTTTCCCCTACGTCC +
Preference number: 5 (lower is better)
Translates to: LSTIIPEDICCAMWA*CTPVLDFCYLSPTS
Trigger: GGACGTAGGGGAAAGGTAACAGAAATCCAGGACTGGAGTGCATCAAGCCCACATAGCGCAGCATATGTCCTCTGGGATAATGGTGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 90 bp AATGCTCAGGTCAGCACCATTGGCTGCCAAGAAACAGGCAATAGATaGTGCACTCTTCTTCTCTGCCCCCTGGGTACCAAGTCCCATTAT +
Preference number: 5 (lower is better)
Translates to: NAQVSTIGCQETGNR*CTLLLCPLGTKSHY
Trigger: ATAATGGGACTTGGTACCCAGGGGGCAGAGAAGAAGAGTGCAGCATCTATTGCCTGTTTCTTGGCAGCCAATGGTGCTGACCTGAGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS-3UTR CAA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATATGGTTCCATCATGCTaGATGCCGGTGGGCGCGCTG +
Preference number: 5 (lower is better)
Translates to: KHRHGIVETTKPASKAPHMVPSC*MPVGAL
Trigger: CAGCGCGCCCACCGGCATCAAGCATGATGGAACCAT...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS TCA 90 bp AGTGCTTTGCAGAGATTCGGATCAGGACAGAGATCAAGTGGCGATTaGCCCTTCTTATTTCGAATGCTCAGGTCAGCACCATTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SALQRFGSGQRSSGD*PFLFRMLRSAPLAA
Trigger: GGCAGCCAATGGTGCTGACCTGAGCATTCGAAATAAGAAGGGTCAATCGCCACTTGATCTCTGTCCTGATCCGAATCTCTGCAAAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 90 bp TTGATCTTCCCACTGCCAGTCCACTCCTCGCACCACTCTGGCACCTaGAAAGATTCCTCTGGCTGTAATCTTCTTAGATTTCCTACGAGA +
Preference number: 5 (lower is better)
Translates to: LIFPLPVHSSHHSGT*KDSSGCNLLRFPTR
Trigger: TCTCGTAGGAAATCTAAGAAGATTACAGCCAGAGGAATCTTTGCAGGTGCCAGAGTGGTGCGAGGAGTGGACTGGCAGTGGGAAGATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 90 bp GGTCATAACAAACTTGTACAAGATCACCCACTTGAAACTGCGAGGTaGCTCCTTCTGCACCCTGAGCAGCATCTCCACTTCGGACAATGT +
Preference number: 5 (lower is better)
Translates to: GHNKLVQDHPLETAR*LLLHPEQHLHFGQC
Trigger: ACATTGTCCGAAGTGGAGATGCTGCTCAGGGTGCAGAAGGAGGCACCTCGCAGTTTCAAGTGGGTGATCTTGTACAAGTTTGTTATGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 90 bp CGATTGACCCTTCTTATTTCGAATGCTCAGGTCAGCACCATTGGCTaGCAAGAAACAGGCAATAGATGCTGCACTCTTCTTCTCTGCCCC +
Preference number: 5 (lower is better)
Translates to: RLTLLISNAQVSTIG*QETGNRCCTLLLCP
Trigger: GGGGCAGAGAAGAAGAGTGCAGCATCTATTGCCTGTTTCTTGGCAGCCAATGGTGCTGACCTGAGCATTCGAAATAAGAAGGGTCAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS CCA 90 bp TTTGTACACTCTGCACACTTCCATCGAATGCCAATGATTGGTTGCTaGCGGCAGGTATCACACATGGTTCCATCATGCTTGATGCCGGTG +
Preference number: 5 (lower is better)
Translates to: FVHSAHFHRMPMIGC*RQVSHMVPSCLMPV
Trigger: CACCGGCATCAAGCATGATGGAACCATGTGTGATACCTGCCGCCAGCAACCAATCATTGGCATTCGATGGAAGTGTGCAGAGTGTACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS CCA 90 bp GCCAAGAAACAGGCAATAGATGCTGCACTCTTCTTCTCTGCCCCCTaGGTACCAAGTCCCATTATTAACGTGTTTTTGGATGGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: AKKQAIDAALFFSAP*VPSPIINVFLDGSQ
Trigger: CTGGGAGCCATCCAAAAACACGTTAATAATGGGACTTGGTACCCAGGGGGCAGAGAAGAAGAGTGCAGCATCTATTGCCTGTTTCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS-3UTR CAA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATGCGGTCTCCACAGAGTaGACAGGTTCCGTGACCACA +
Preference number: 5 (lower is better)
Translates to: KHRHGIVETTKPASKAPHAVSTE*TGSVTT
Trigger: TGTGGTCACGGAACCTGTCAACTCTGTGGAGACCGC...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS CCA 90 bp TTTGTACACTCTGCACACTTCCATCGAATGCCAATGATTGGTTGCTaGCGGCAGGTATCACACATGGTTCCATCATGCTTGATGCCTGAC +
Preference number: 5 (lower is better)
Translates to: FVHSAHFHRMPMIGC*RQVSHMVPSCLMPD
Trigger: GTCAGGCATCAAGCATGATGGAACCATGTGTGATACCTGCCGCCAGCAACCAATCATTGGCATTCGATGGAAGTGTGCAGAGTGTACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578646.5
CDS-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTTGGCAGCTGTGCCGTaGTCCCACACTACCACCACC +
Preference number: 5 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLLAAVP*SHTTTT
Trigger: GGTGGTGGTAGTGTGGGACAACGGCACAGCTGCCAA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATCCACCAGGATTCCTGTaGCCATTCTGCTCACCTAGC +
Preference number: 5 (lower is better)
Translates to: KHRHGIVETTKPASKAPHPPGFL*PFCSPS
Trigger: GCTAGGTGAGCAGAATGGCAACAGGAATCCTGGTGG...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCCTGCGCTATGTGGGCTaGATGCACTCCAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLLRYVG*MHSSPG
Trigger: TCCAGGACTGGAGTGCATCAAGCCCACATAGCGCAG...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATAATGCCAATGATTGGTaGCTGGCGGCAGGTATCACA +
Preference number: 5 (lower is better)
Translates to: KHRHGIVETTKPASKAPHNANDW*LAAGIT
Trigger: TGTGATACCTGCCGCCAGCAACCAATCATTGGCATT...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCCTCAGGTCAGCACCATaGGCTGCCAAGAAACAGGCA +
Preference number: 5 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLLRSAP*AAKKQA
Trigger: TGCCTGTTTCTTGGCAGCCAATGGTGCTGACCTGAG...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATCACTTTGCCAGTGCTTaGCAGAGATTCGGATCAGGA +
Preference number: 5 (lower is better)
Translates to: KHRHGIVETTKPASKAPHHFASA*QRFGSG
Trigger: TCCTGATCCGAATCTCTGCAAAGCACTGGCAAAGTG...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS TCA 90 bp TGTAGTACTTCTATAACAGCGCCTTCATCTCCAAAAGCTGCATGGTaGACTGCTCTATCACCATCTTTATCCTCTGCTTCGACATCCACG +
Preference number: 5 (lower is better)
Translates to: CSTSITAPSSPKAAW*TALSPSLSSASTST
Trigger: CGTGGATGTCGAAGCAGAGGATAAAGATGGTGATAGAGCAGTTCACCATGCAGCTTTTGGAGATGAAGGCGCTGTTATAGAAGTACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261537.7
ENST00000578260.1
ENST00000578646.5
CDS GCA 90 bp TGTACAATTTCGAGGTCGAGATCTATATTTACCAGGTCACCAATCTaGAATCCACCAGGATTCCTGTTGCCATTCTGCTCACCTAGCACA +
Preference number: 5 (lower is better)
Translates to: CTISRSRSIFTRSPI*NPPGFLLPFCSPST
Trigger: TGTGCTAGGTGAGCAGAATGGCAACAGGAATCCTGGTGGATTGCAGATTGGTGACCTGGTAAATATAGATCTCGACCTCGAAATTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 90 bp CAGCACATAATGAAAGGCACTCTTCGTTCAACTACTGCTCGACACTaGACACACTTTTTCATCAGGTTAGCACAGTTCTCACAAGCACAC +
Preference number: 5 (lower is better)
Translates to: QHIMKGTLRSTTARH*THFFIRLAQFSQAH
Trigger: GTGTGCTTGTGAGAACTGTGCTAACCTGATGAAAAAGTGTGTGCAGTGTCGAGCAGTAGTTGAACGAAGAGTGCCTTTCATTATGTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 90 bp TTTCCCTCCACAGCACATAATGAAAGGCACTCTTCGTTCAACTACTaGTCGACACTGCACACACTTTTTCATCAGGTTAGCACAGTTCTC +
Preference number: 5 (lower is better)
Translates to: FPSTAHNERHSSFNY*STLHTLFHQVSTVL
Trigger: GAGAACTGTGCTAACCTGATGAAAAAGTGTGTGCAGTGTCGAGCAGTAGTTGAACGAAGAGTGCCTTTCATTATGTGCTGTGGAGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS-3UTR CAA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATCAACTTTACCTAAAGTaGGAAGCATCGCTTCAGCCC +
Preference number: 5 (lower is better)
Translates to: KHRHGIVETTKPASKAPHQLYLK*EASLQP
Trigger: GGGCTGAAGCGATGCTTCCAACTTTAGGTAAAGTTG...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCATTCTGACTAGCAGCTaGCATAGCTGTGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLILTSS*HSCVAS
Trigger: GCTGGCCACACAGCTATGCAAGCTGCTAGTCAGAAT...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCCACCTTCCCCACATCTaGCATATCTTGGAGCTGACG +
Preference number: 5 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLHLPHI*HILELT
Trigger: CGTCAGCTCCAAGATATGCAAGATGTGGGGAAGGTG...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCCAGCAAAGCTCCCCATaGCTTTCACCAGGACTTGCA +
Preference number: 5 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLQQSSP*LSPGLA
Trigger: TGCAAGTCCTGGTGAAAGCAATGGGGAGCTTTGCTG...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS TCA 90 bp ACAAATCATAATTTGTACACTCTGCACACTTCCATCGAATGCCAATaGTTGGTTGCTGGCGGCAGGTATCACACATGGTTCCATCATGCT +
Preference number: 5 (lower is better)
Translates to: TNHNLYTLHTSIECQ*LVAGGRYHTWFHHA
Trigger: AGCATGATGGAACCATGTGTGATACCTGCCGCCAGCAACCAATCATTGGCATTCGATGGAAGTGTGCAGAGTGTACAAATTATGATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 90 bp ATCTCCATGATAACACACTGTGCACAAATCATAATTTGTACACTCTaGACACTTCCATCGAATGCCAATGATTGGTTGCTGGCGGCAGGT +
Preference number: 5 (lower is better)
Translates to: ISMITHCAQIIICTL*TLPSNANDWLLAAG
Trigger: ACCTGCCGCCAGCAACCAATCATTGGCATTCGATGGAAGTGTGCAGAGTGTACAAATTATGATTTGTGCACAGTGTGTTATCATGGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS CCA 90 bp ATCATAATTTGTACACTCTGCACACTTCCATCGAATGCCAATGATTaGTTGCTGGCGGCAGGTATCACACATGGTTCCATCATGCTTGAT +
Preference number: 5 (lower is better)
Translates to: IIICTLCTLPSNAND*LLAAGITHGSIMLD
Trigger: ATCAAGCATGATGGAACCATGTGTGATACCTGCCGCCAGCAACCAATCATTGGCATTCGATGGAAGTGTGCAGAGTGTACAAATTATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS-3UTR CAA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATTTGAAGGTCCACCTATaGCCACTTGGATACTGTACT +
Preference number: 5 (lower is better)
Translates to: KHRHGIVETTKPASKAPHLKVHL*PLGYCT
Trigger: AGTACAGTATCCAAGTGGCAATAGGTGGACCTTCAA...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGTACAAGATCACCCACTaGAAACTGCGAGGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKYKITH*KLRGAS
Trigger: GGAGGCACCTCGCAGTTTCAAGTGGGTGATCTTGTA...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTGTGTGGCCAGCACATaGCCCATTTACATCCACATC +
Preference number: 5 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLCVAST*PIYIHI
Trigger: GATGTGGATGTAAATGGGCAATGTGCTGGCCACACA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCGGTGTCTGTCGGCGCTaGTTTCGAGCATTCAAATCA +
Preference number: 5 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLGVCRR*FRAFKS
Trigger: TGATTTGAATGCTCGAAACAAGCGCCGACAGACACC...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATATTATTAACGTGTTTTaGGATGGCTCCCAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: KHRHGIVETTKPASKAPHIINVF*DGSQAA
Trigger: TGCTGCCTGGGAGCCATCCAAAAACACGTTAATAAT...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATCTTCGTTCAATAGCCTaGCGACAGATAGGACATTCA +
Preference number: 5 (lower is better)
Translates to: KHRHGIVETTKPASKAPHLRSIA*RQIGHS
Trigger: TGAATGTCCTATCTGTCGCAAGGCTATTGAACGAAG...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS CCA 90 bp AGTCTTCACAACTTGAAGATGACCTTTATTGACAGCAATATGAAGTaGTGTCTGTCGGCGCTTGTTTCGAGCATTCAAATCAGCACTACC +
Preference number: 5 (lower is better)
Translates to: SLHNLKMTFIDSNMK*CLSALVSSIQISTT
Trigger: GGTAGTGCTGATTTGAATGCTCGAAACAAGCGCCGACAGACACCACTTCATATTGCTGTCAATAAAGGTCATCTTCAAGTTGTGAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261537.7
ENST00000577749.5
ENST00000578260.1
ENST00000578646.5
CDS-3UTR CAA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATTCCACCTATTGCCACTaGGATACTGTACTACAATGT +
Preference number: 5 (lower is better)
Translates to: KHRHGIVETTKPASKAPHSTYCH*DTVLQC
Trigger: ACATTGTAGTACAGTATCCAAGTGGCAATAGGTGGA...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGGTGAGAACAGCAGGATaGAAGGTCCACCTATTGCCA +
Preference number: 5 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKVRTAG*KVHLLP
Trigger: TGGCAATAGGTGGACCTTCAATCCTGCTGTTCTCAC...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCCTTTCACCAGATGCATaGCTAATGGCTGATCCTGCA +
Preference number: 5 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLLSPDA*LMADPA
Trigger: TGCAGGATCAGCCATTAGCAATGCATCTGGTGAAAG...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATGAGATCAAGTGGCGATaGACCCTTCTTATTTCGAAT +
Preference number: 5 (lower is better)
Translates to: KHRHGIVETTKPASKAPHEIKWR*TLLISN
Trigger: ATTCGAAATAAGAAGGGTCAATCGCCACTTGATCTC...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCACTCCGAGAACCCACTaGACCACTGACTTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLTPRTH*TTDFFL
Trigger: AAGGAAAAAGTCAGTGGTCAAGTGGGTTCTCGGAGT...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATCTGTTGCTGCAACTTTaGCACATCTGCATTGACATT +
Preference number: 5 (lower is better)
Translates to: KHRHGIVETTKPASKAPHLLLQL*HICIDI
Trigger: AATGTCAATGCAGATGTGCAAAAGTTGCAGCAACAG...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTGCTTTCACCAGGACTaGCAAAGGCAGCAAGGATTA +
Preference number: 5 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLCFHQD*QRQQGL
Trigger: TAATCCTTGCTGCCTTTGCAAGTCCTGGTGAAAGCA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS TCA 90 bp CCAGTTGTAGTTAAAGTCTCAAACATTCCATCAGTCCATCCTCCATaGCCATGCTGCAAAGACTGTACAATTTCGAGGTCGAGATCTATA +
Preference number: 5 (lower is better)
Translates to: PVVVKVSNIPSVHPP*PCCKDCTISRSRSI
Trigger: TATAGATCTCGACCTCGAAATTGTACAGTCTTTGCAGCATGGTCATGGAGGATGGACTGATGGAATGTTTGAGACTTTAACTACAACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS TCA 90 bp AGCCAAAGTCCAATAAAGTCTTCACAACTTGAAGATGACCTTTATTaGCAGCAATATGAAGTGGTGTCTGTCGGCGCTTGTTTCGAGCAT +
Preference number: 5 (lower is better)
Translates to: SQSPIKSSQLEDDLY*QQYEVVSVGACFEH
Trigger: ATGCTCGAAACAAGCGCCGACAGACACCACTTCATATTGCTGTCAATAAAGGTCATCTTCAAGTTGTGAAGACTTTATTGGACTTTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261537.7
ENST00000577749.5
ENST00000578260.1
ENST00000578646.5
CDS GCA 90 bp CACACAGGGCACATTGTCTGCTCTTTAATGTCTTGTAACTGTTGCTaGAACTTTTGCACATCTGCATTGACATTGGTATTATCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: HTGHIVCSLMSCNCC*NFCTSALTLVLSLS
Trigger: GGACAAGGATAATACCAATGTCAATGCAGATGTGCAAAAGTTGCAGCAACAGTTACAAGACATTAAAGAGCAGACAATGTGCCCTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS-3UTR CAA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATCACGTTTCTTACTTATaGCATCATGAAGAGGGGTAT +
Preference number: 5 (lower is better)
Translates to: KHRHGIVETTKPASKAPHHVSYL*HHEEGY
Trigger: ATACCCCTCTTCATGATGCAATAAGTAAGAAACGTG...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCTCTGGATATCCAGGTTaGCATTACCCTGATGTACCA +
Preference number: 5 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLSGYPG*HYPDVP
Trigger: TGGTACATCAGGGTAATGCAAACCTGGATATCCAGA...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGCATGTGGCCACAGGGTaGAAAAAGAACAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKHVATG*KKNSCF
Trigger: AAAGCAGCTGTTCTTTTTCAACCCTGTGGCCACATG...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCCAGGTCATAACAAACTaGTACAAGATCACCCACTTG +
Preference number: 5 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCQVITN*YKITHL
Trigger: CAAGTGGGTGATCTTGTACAAGTTTGTTATGACCTG...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCACAGACATGGAATTGTaGAGACTACAAAACCAGCCA +
Preference number: 5 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLTDMEL*RLQNQP
Trigger: TGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGT...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATATGTTATCAGGACCTTaGGATCTCTTCCTTTTAACT +
Preference number: 5 (lower is better)
Translates to: KHRHGIVETTKPASKAPHMLSGP*DLFLLT
Trigger: AGTTAAAAGGAAGAGATCCAAAGGTCCTGATAACAT...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAACACAGACATGGAATTGTTGAGACTACAAAACCAGCCAGCAAAGCTCCCCATGACACTTATGCTGAATaGAAGATGTACATCCTTGTT +
Preference number: 5 (lower is better)
Translates to: KHRHGIVETTKPASKAPHDTYAE*KMYILV
Trigger: AACAAGGATGTACATCTTCAATTCAGCATAAGTGTC...ATGGGGAGCTTTGCTGGCTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS TCA 90 bp GATAGTAAAACACGCATTGCACTGGGATTTCCCCTTAGTGCAGCATaGTGCAGAGCATTAAATCCATTATTGTTTGTGATGGTAACATCT +
Preference number: 5 (lower is better)
Translates to: DSKTRIALGFPLSAA*CRALNPLLFVMVTS
Trigger: AGATGTTACCATCACAAACAATAATGGATTTAATGCTCTGCATCATGCTGCACTAAGGGGAAATCCCAGTGCAATGCGTGTTTTACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS-3UTR CAA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCTGCACAAATCATAATTaGTACACTCTGCACACTTCC +
Preference number: 5 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCCTNHN*YTLHTS
Trigger: GGAAGTGTGCAGAGTGTACAAATTATGATTTGTGCA...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGATAGTAAAACACGCATaGCACTGGGATTTCCCCTTA +
Preference number: 5 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKIVKHA*HWDFPL
Trigger: TAAGGGGAAATCCCAGTGCAATGCGTGTTTTACTAT...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGTTTCCTTATGACACTTaGCCAGTGCTTTGCAGAGAT +
Preference number: 5 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKFPYDT*PVLCRD
Trigger: ATCTCTGCAAAGCACTGGCAAAGTGTCATAAGGAAA...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGCAGATGAGGCATTTCTaGACACGTGGAGAACATAAA +
Preference number: 5 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKQMRHF*TRGEHK
Trigger: TTTATGTTCTCCACGTGTCAAGAAATGCCTCATCTG...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCCACATTCTTCAATCTTaGTCCTGGATTGAACCTGTT +
Preference number: 5 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCHILQS*SWIEPV
Trigger: AACAGGTTCAATCCAGGACAAAGATTGAAGAATGTG...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCAACACAGACATGGAATaGTTGAGACTACAAAACCAG +
Preference number: 5 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLNTDME*LRLQNQ
Trigger: CTGGTTTTGTAGTCTCAACAATTCCATGTCTGTGTT...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCGCACCATCTGGTATGTaGTATGTGTATGTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCAPSGM*YVYVLS
Trigger: ACTCAAAACATACACATACAACATACCAGATGGTGC...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp TACAGATTTAGGCACCAAATTAATGTGACAAGTCACTTCTCCTGTACCTACTGCTTTTGCACATCTGCATaGACATTGGTATTATCCTTG +
Preference number: 5 (lower is better)
Translates to: YRFRHQINVTSHFSCTYCFCTSA*TLVLSL
Trigger: CAAGGATAATACCAATGTCAATGCAGATGTGCAAAA...GCAGTAGGTACAGGAGAAGTGACTTGTCACATTAATTTGGTGCCTAAATCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp CTATGTTTCCCAAACAGATCCTCCTTTCATACTAAAATAGCAAACTGTGGCCTCGAAAAGGCATTAATTTaGCAGATCACTGGGATACTA +
Preference number: 5 (lower is better)
Translates to: LCFPNRSSFHTKIANCGLEKALI*QITGIL
Trigger: TAGTATCCCAGTGATCTGCAAAATTAATGCCTTTTC...GAGGCCACAGTTTGCTATTTTAGTATGAAAGGAGGATCTGTTTGGGAAACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGATGACCCAGCAAGTTTaGATATTTGAACCAGACACA +
Preference number: 5 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKMTQQV*IFEPDT
Trigger: TGTGTCTGGTTCAAATATCAAAACTTGCTGGGTCAT...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGAATCTTTGTCCTGGATaGAACCTGTTCTTTACAGAT +
Preference number: 5 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKNLCPG*NLFFTD
Trigger: ATCTGTAAAGAACAGGTTCAATCCAGGACAAAGATT...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS-3UTR CAA 90 bp AAGTCTACAGGTAAGCAGACATTTCTATACATGTCCTGGTCACTCTTTCTAAAGACATCTGCATTGACATaGGTATTATCCTTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: KSTGKQTFLYMSWSLFLKTSALT*VLSLSF
Trigger: AAAGGACAAGGATAATACCAATGTCAATGCAGATGT...CTTTAGAAAGAGTGACCAGGACATGTATAGAAATGTCTGCTTACCTGTAGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS CCA 72 bp GGTTATTCCGGGAGTTACTCATCGGGGCCCGGGCGGTaGGCTCCGCCGCTGCCGCCGCCGCCGCCGCCGCTG +
Preference number: 6 (lower is better)
Translates to: GYSGSYSSGPGR*APPLPPPPPPL
Trigger: CAGCGGCGGCGGCGGCGGCGGCAGCGGCGGAGCCCACCGCCCGGGCCCCGATGAGTAACTCCCGGAATAACC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS GCA 72 bp CCACCACCTCCTCGGGGCTCTCGAAGCTCCGGACGGTaGCCACATGGCCCTCGCCGCCGTCCTGCTTCCCCC +
Preference number: 6 (lower is better)
Translates to: PPPPRGSRSSGR*PHGPRRRPASP
Trigger: GGGGGAAGCAGGACGGCGGCGAGGGCCATGTGGGCACCGTCCGGAGCTTCGAGAGCCCCGAGGAGGTGGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS CAA 72 bp ACCAGCGCTGCCGATCCGTCAGCTCTCGGCCCACCCTaGGGGATCCCCATCGCCCACTGCGACCTAGCTGGG +
Preference number: 6 (lower is better)
Translates to: TSAADPSALGPP*GIPIAHCDLAG
Trigger: CCCAGCTAGGTCGCAGTGGGCGATGGGGATCCCCAAGGGTGGGCCGAGAGCTGACGGATCGGCAGCGCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578646.5
CDS GCA 72 bp CCGCCGCAGAGCGGAATCGTTCAAGGTCACTGGGGCTaGAGGTGCGGGGCCTTAACCAGCGCTGCCGATCCG +
Preference number: 6 (lower is better)
Translates to: PPQSGIVQGHWG*RCGALTSAADP
Trigger: CGGATCGGCAGCGCTGGTTAAGGCCCCGCACCTGCAGCCCCAGTGACCTTGAACGATTCCGCTCTGCGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578646.5
CDS CCA 72 bp GGACACCCGCCGCAGAGCGGAATCGTTCAAGGTCACTaGGGCTGCAGGTGCGGGGCCTTAACCAGCGCTGCC +
Preference number: 6 (lower is better)
Translates to: GHPPQSGIVQGH*GCRCGALTSAA
Trigger: GGCAGCGCTGGTTAAGGCCCCGCACCTGCAGCCCCAGTGACCTTGAACGATTCCGCTCTGCGGCGGGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578646.5
CDS GCA 72 bp GGTCGTAAGCCCCGGAGCAGCGGTAGTTGGCAGCTGTaGCGTTGTCCCACACTACCACCACCTCCTCGGGGC +
Preference number: 6 (lower is better)
Translates to: GRKPRSSGSWQL*RCPTLPPPPRG
Trigger: GCCCCGAGGAGGTGGTGGTAGTGTGGGACAACGGCACAGCTGCCAACTACCGCTGCTCCGGGGCTTACGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS CCA 72 bp GGATGCGGAGGTCGTAAGCCCCGGAGCAGCGGTAGTTaGCAGCTGTGCCGTTGTCCCACACTACCACCACCT +
Preference number: 6 (lower is better)
Translates to: GCGGRKPRSSGS*QLCRCPTLPPP
Trigger: AGGTGGTGGTAGTGTGGGACAACGGCACAGCTGCCAACTACCGCTGCTCCGGGGCTTACGACCTCCGCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS CCA 72 bp GAGTGTCTAGGAGGGGGATCCTCGGCAATAATAGAGTaGGAAGGCTTCCAGAGAGCCGCGCGATCGCGGGAA +
Preference number: 6 (lower is better)
Translates to: ECLGGGSSAIIE*EGFQRAARSRE
Trigger: TTCCCGCGATCGCGCGGCTCTCTGGAAGCCTTCCCACTCTATTATTGCCGAGGATCCCCCTCCTAGACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261537.7
CDS CAA 90 bp GTCCTGGATTTCTGTTACCTTTCCCCTACGTCCATTTCCTCCATCTaGATCTTCCCACTGCCAGTCCACTCCTCGCACCACTCTGGCACC +
Preference number: 6 (lower is better)
Translates to: VLDFCYLSPTSISSI*IFPLPVHSSHHSGT
Trigger: GGTGCCAGAGTGGTGCGAGGAGTGGACTGGCAGTGGGAAGATCAAGATGGAGGAAATGGACGTAGGGGAAAGGTAACAGAAATCCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 72 bp GTCAGCACCATTGGCTGCCAAGAAACAGGCAATAGATaGTGCACTCTTCTTCTCTGCCCCCTGGGTACCAAG +
Preference number: 6 (lower is better)
Translates to: VSTIGCQETGNR*CTLLLCPLGTK
Trigger: CTTGGTACCCAGGGGGCAGAGAAGAAGAGTGCAGCATCTATTGCCTGTTTCTTGGCAGCCAATGGTGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS TCA 72 bp TCTGTTACCTTTCCCCTACGTCCATTTCCTCCATCTTaGTCTTCCCACTGCCAGTCCACTCCTCGCACCACT +
Preference number: 6 (lower is better)
Translates to: SVTFPLRPFPPS*SSHCQSTPRTT
Trigger: AGTGGTGCGAGGAGTGGACTGGCAGTGGGAAGATCAAGATGGAGGAAATGGACGTAGGGGAAAGGTAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS CAA 72 bp TTCTGTTACCTTTCCCCTACGTCCATTTCCTCCATCTaGATCTTCCCACTGCCAGTCCACTCCTCGCACCAC +
Preference number: 6 (lower is better)
Translates to: FCYLSPTSISSI*IFPLPVHSSHH
Trigger: GTGGTGCGAGGAGTGGACTGGCAGTGGGAAGATCAAGATGGAGGAAATGGACGTAGGGGAAAGGTAACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 72 bp CCACTGCCAGTCCACTCCTCGCACCACTCTGGCACCTaGAAAGATTCCTCTGGCTGTAATCTTCTTAGATTT +
Preference number: 6 (lower is better)
Translates to: PLPVHSSHHSGT*KDSSGCNLLRF
Trigger: AAATCTAAGAAGATTACAGCCAGAGGAATCTTTGCAGGTGCCAGAGTGGTGCGAGGAGTGGACTGGCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 72 bp GCACCTGCACGGACCAAAAGCCTAACAATCTGGGTATaGTGTCGTTCAACAGCAAGGTGTAGGGCAGTTTGT +
Preference number: 6 (lower is better)
Translates to: APARTKSLTIWV*CRSTARCRAVC
Trigger: ACAAACTGCCCTACACCTTGCTGTTGAACGACAGCATACCCAGATTGTTAGGCTTTTGGTCCGTGCAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS CAA 90 bp CAGTGCTTTGCAGAGATTCGGATCAGGACAGAGATCAAGTGGCGATaGACCCTTCTTATTTCGAATGCTCAGGTCAGCACCATTGGCTGC +
Preference number: 6 (lower is better)
Translates to: QCFAEIRIRTEIKWR*TLLISNAQVSTIGC
Trigger: GCAGCCAATGGTGCTGACCTGAGCATTCGAAATAAGAAGGGTCAATCGCCACTTGATCTCTGTCCTGATCCGAATCTCTGCAAAGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS CCA 72 bp TCTGCACACTTCCATCGAATGCCAATGATTGGTTGCTaGCGGCAGGTATCACACATGGTTCCATCATGCTTG +
Preference number: 6 (lower is better)
Translates to: SAHFHRMPMIGC*RQVSHMVPSCL
Trigger: CAAGCATGATGGAACCATGTGTGATACCTGCCGCCAGCAACCAATCATTGGCATTCGATGGAAGTGTGCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS CCA 72 bp TGTACACTCTGCACACTTCCATCGAATGCCAATGATTaGTTGCTGGCGGCAGGTATCACACATGGTTCCATC +
Preference number: 6 (lower is better)
Translates to: CTLCTLPSNAND*LLAAGITHGSI
Trigger: GATGGAACCATGTGTGATACCTGCCGCCAGCAACCAATCATTGGCATTCGATGGAAGTGTGCAGAGTGTACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS CAA 72 bp ACACTCTGCACACTTCCATCGAATGCCAATGATTGGTaGCTGGCGGCAGGTATCACACATGGTTCCATCATG +
Preference number: 6 (lower is better)
Translates to: TLCTLPSNANDW*LAAGITHGSIM
Trigger: CATGATGGAACCATGTGTGATACCTGCCGCCAGCAACCAATCATTGGCATTCGATGGAAGTGTGCAGAGTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS TCA 72 bp ATTATCCCAGAGGACATATGCTGCGCTATGTGGGCTTaGTGCACTCCAGTCCTGGATTTCTGTTACCTTTCC +
Preference number: 6 (lower is better)
Translates to: IIPEDICCAMWA*CTPVLDFCYLS
Trigger: GGAAAGGTAACAGAAATCCAGGACTGGAGTGCATCAAGCCCACATAGCGCAGCATATGTCCTCTGGGATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 72 bp ATCCCCATCCTTATCCTGAATATCAAGCTTGGCACCTaGACGGACCAAAAGCCTAACAATCTGGGTATGCTG +
Preference number: 6 (lower is better)
Translates to: IPILILNIKLGT*TDQKPNNLGML
Trigger: CAGCATACCCAGATTGTTAGGCTTTTGGTCCGTGCAGGTGCCAAGCTTGATATTCAGGATAAGGATGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 72 bp AGAGATCAAGTGGCGATTGACCCTTCTTATTTCGAATaGTCAGGTCAGCACCATTGGCTGCCAAGAAACAGG +
Preference number: 6 (lower is better)
Translates to: RDQVAIDPSYFE*SGQHHWLPRNR
Trigger: CCTGTTTCTTGGCAGCCAATGGTGCTGACCTGAGCATTCGAAATAAGAAGGGTCAATCGCCACTTGATCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS CAA 72 bp CATTATCCCAGAGGACATATGCTGCGCTATGTGGGCTaGATGCACTCCAGTCCTGGATTTCTGTTACCTTTC +
Preference number: 6 (lower is better)
Translates to: HYPRGHMLRYVG*MHSSPGFLLPF
Trigger: GAAAGGTAACAGAAATCCAGGACTGGAGTGCATCAAGCCCACATAGCGCAGCATATGTCCTCTGGGATAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS CAA 90 bp TTTAATTCGTTCCAGGTCATAACAAACTTGTACAAGATCACCCACTaGAAACTGCGAGGTGCCTCCTTCTGCACCCTGAGCAGCATCTCC +
Preference number: 6 (lower is better)
Translates to: FNSFQVITNLYKITH*KLRGASFCTLSSIS
Trigger: GGAGATGCTGCTCAGGGTGCAGAAGGAGGCACCTCGCAGTTTCAAGTGGGTGATCTTGTACAAGTTTGTTATGACCTGGAACGAATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS CAA 90 bp AGCCTTGCGACAGATAGGACATTCACTCATGCGGTCTCCACAGAGTaGACAGGTTCCGTGACCACAAAGGAAAATCATATTCTTCAGACG +
Preference number: 6 (lower is better)
Translates to: SLATDRTFTHAVSTE*TGSVTTKENHILQT
Trigger: CGTCTGAAGAATATGATTTTCCTTTGTGGTCACGGAACCTGTCAACTCTGTGGAGACCGCATGAGTGAATGTCCTATCTGTCGCAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS CAA 90 bp ATAATTTGTACACTCTGCACACTTCCATCGAATGCCAATGATTGGTaGCTGGCGGCAGGTATCACACATGGTTCCATCATGCTTGATGCC +
Preference number: 6 (lower is better)
Translates to: IICTLCTLPSNANDW*LAAGITHGSIMLDA
Trigger: GGCATCAAGCATGATGGAACCATGTGTGATACCTGCCGCCAGCAACCAATCATTGGCATTCGATGGAAGTGTGCAGAGTGTACAAATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS TCA 72 bp AATTTGTACACTCTGCACACTTCCATCGAATGCCAATaGTTGGTTGCTGGCGGCAGGTATCACACATGGTTC +
Preference number: 6 (lower is better)
Translates to: NLYTLHTSIECQ*LVAGGRYHTWF
Trigger: GAACCATGTGTGATACCTGCCGCCAGCAACCAATCATTGGCATTCGATGGAAGTGTGCAGAGTGTACAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 72 bp TCGAGGTCGAGATCTATATTTACCAGGTCACCAATCTaGAATCCACCAGGATTCCTGTTGCCATTCTGCTCA +
Preference number: 6 (lower is better)
Translates to: SRSRSIFTRSPI*NPPGFLLPFCS
Trigger: TGAGCAGAATGGCAACAGGAATCCTGGTGGATTGCAGATTGGTGACCTGGTAAATATAGATCTCGACCTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 72 bp AACAGCGCCTTCATCTCCAAAAGCTGCATGGTGAACTaGTCTATCACCATCTTTATCCTCTGCTTCGACATC +
Preference number: 6 (lower is better)
Translates to: NSAFISKSCMVN*SITIFILCFDI
Trigger: GATGTCGAAGCAGAGGATAAAGATGGTGATAGAGCAGTTCACCATGCAGCTTTTGGAGATGAAGGCGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261537.7
ENST00000578260.1
ENST00000578646.5
CDS CCA 72 bp CAGGCAATAGATGCTGCACTCTTCTTCTCTGCCCCCTaGGTACCAAGTCCCATTATTAACGTGTTTTTGGAT +
Preference number: 6 (lower is better)
Translates to: QAIDAALFFSAP*VPSPIINVFLD
Trigger: ATCCAAAAACACGTTAATAATGGGACTTGGTACCCAGGGGGCAGAGAAGAAGAGTGCAGCATCTATTGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS TCA 72 bp TCTATAACAGCGCCTTCATCTCCAAAAGCTGCATGGTaGACTGCTCTATCACCATCTTTATCCTCTGCTTCG +
Preference number: 6 (lower is better)
Translates to: SITAPSSPKAAW*TALSPSLSSAS
Trigger: CGAAGCAGAGGATAAAGATGGTGATAGAGCAGTTCACCATGCAGCTTTTGGAGATGAAGGCGCTGTTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261537.7
ENST00000578260.1
ENST00000578646.5
CDS GCA 72 bp CTTCTTATTTCGAATGCTCAGGTCAGCACCATTGGCTaGCAAGAAACAGGCAATAGATGCTGCACTCTTCTT +
Preference number: 6 (lower is better)
Translates to: LLISNAQVSTIG*QETGNRCCTLL
Trigger: AAGAAGAGTGCAGCATCTATTGCCTGTTTCTTGGCAGCCAATGGTGCTGACCTGAGCATTCGAAATAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS TCA 72 bp GTTAAAGTCTCAAACATTCCATCAGTCCATCCTCCATaGCCATGCTGCAAAGACTGTACAATTTCGAGGTCG +
Preference number: 6 (lower is better)
Translates to: VKVSNIPSVHPP*PCCKDCTISRS
Trigger: CGACCTCGAAATTGTACAGTCTTTGCAGCATGGTCATGGAGGATGGACTGATGGAATGTTTGAGACTTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 72 bp ATGAAAGGCACTCTTCGTTCAACTACTGCTCGACACTaGACACACTTTTTCATCAGGTTAGCACAGTTCTCA +
Preference number: 6 (lower is better)
Translates to: MKGTLRSTTARH*THFFIRLAQFS
Trigger: TGAGAACTGTGCTAACCTGATGAAAAAGTGTGTGCAGTGTCGAGCAGTAGTTGAACGAAGAGTGCCTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 72 bp ACAGCACATAATGAAAGGCACTCTTCGTTCAACTACTaGTCGACACTGCACACACTTTTTCATCAGGTTAGC +
Preference number: 6 (lower is better)
Translates to: TAHNERHSSFNY*STLHTLFHQVS
Trigger: GCTAACCTGATGAAAAAGTGTGTGCAGTGTCGAGCAGTAGTTGAACGAAGAGTGCCTTTCATTATGTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS CAA 72 bp ACAGATAGGACATTCACTCATGCGGTCTCCACAGAGTaGACAGGTTCCGTGACCACAAAGGAAAATCATATT +
Preference number: 6 (lower is better)
Translates to: TDRTFTHAVSTE*TGSVTTKENHI
Trigger: AATATGATTTTCCTTTGTGGTCACGGAACCTGTCAACTCTGTGGAGACCGCATGAGTGAATGTCCTATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS CAA 90 bp CAGCTTCCAAAAGAACTGCTAGGATATCATCACGTTTCTTACTTATaGCATCATGAAGAGGGGTATCACCTTCAGAATCCTGGAGACTGG +
Preference number: 6 (lower is better)
Translates to: QLPKELLGYHHVSYL*HHEEGYHLQNPGDW
Trigger: CCAGTCTCCAGGATTCTGAAGGTGATACCCCTCTTCATGATGCAATAAGTAAGAAACGTGATGATATCCTAGCAGTTCTTTTGGAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS TCA 72 bp GCTAGGATATCATCACGTTTCTTACTTATTGCATCATaGAGAGGGGTATCACCTTCAGAATCCTGGAGACTG +
Preference number: 6 (lower is better)
Translates to: ARISSRFLLIAS*RGVSPSESWRL
Trigger: CAGTCTCCAGGATTCTGAAGGTGATACCCCTCTTCATGATGCAATAAGTAAGAAACGTGATGATATCCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261537.7
ENST00000577749.5
ENST00000578260.1
ENST00000578646.5
CDS TCA 72 bp ACACGCATTGCACTGGGATTTCCCCTTAGTGCAGCATaGTGCAGAGCATTAAATCCATTATTGTTTGTGATG +
Preference number: 6 (lower is better)
Translates to: TRIALGFPLSAA*CRALNPLLFVM
Trigger: CATCACAAACAATAATGGATTTAATGCTCTGCATCATGCTGCACTAAGGGGAAATCCCAGTGCAATGCGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS TCA 72 bp TCTATAACAGCGCCTTCATCTCCAAAAGCTGCATGGTaGACTGCTCTATCACCATCTTTATCCTGGATGATT +
Preference number: 6 (lower is better)
Translates to: SITAPSSPKAAW*TALSPSLSWMI
Trigger: AATCATCCAGGATAAAGATGGTGATAGAGCAGTTCACCATGCAGCTTTTGGAGATGAAGGCGCTGTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577749.5
CDS TCA 72 bp TTCAAAAGTAACTTCAAAATGTCAACATGTCCATTCTaGCTAGCAGCTTGCATAGCTGTGTGGCCAGCACAT +
Preference number: 6 (lower is better)
Translates to: FKSNFKMSTCPF*LAACIAVWPAH
Trigger: ATGTGCTGGCCACACAGCTATGCAAGCTGCTAGTCAGAATGGACATGTTGACATTTTGAAGTTACTTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261537.7
ENST00000577749.5
ENST00000578260.1
ENST00000578646.5
CDS TCA 72 bp CCAATAAAGTCTTCACAACTTGAAGATGACCTTTATTaGCAGCAATATGAAGTGGTGTCTGTCGGCGCTTGT +
Preference number: 6 (lower is better)
Translates to: PIKSSQLEDDLY*QQYEVVSVGAC
Trigger: ACAAGCGCCGACAGACACCACTTCATATTGCTGTCAATAAAGGTCATCTTCAAGTTGTGAAGACTTTATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261537.7
ENST00000577749.5
ENST00000578260.1
ENST00000578646.5
CDS TCA 72 bp CATGGTGAACTGCTCTATCACCATCTTTATCCTGGATaGTTACCACAACTCAACCTCCCTTCACTTTCTTAT +
Preference number: 6 (lower is better)
Translates to: HGELLYHHLYPG*LPQLNLPSLSY
Trigger: ATAAGAAAGTGAAGGGAGGTTGAGTTGTGGTAATCATCCAGGATAAAGATGGTGATAGAGCAGTTCACCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577749.5
CDS CAA 72 bp AAAGAACTGCTAGGATATCATCACGTTTCTTACTTATaGCATCATGAAGAGGGGTATCACCTTCAGAATCCT +
Preference number: 6 (lower is better)
Translates to: KELLGYHHVSYL*HHEEGYHLQNP
Trigger: AGGATTCTGAAGGTGATACCCCTCTTCATGATGCAATAAGTAAGAAACGTGATGATATCCTAGCAGTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS GCA 72 bp CACATTGTCTGCTCTTTAATGTCTTGTAACTGTTGCTaGAACTTTTGCACATCTGCATTGACATTGGTATTA +
Preference number: 6 (lower is better)
Translates to: HIVCSLMSCNCC*NFCTSALTLVL
Trigger: TAATACCAATGTCAATGCAGATGTGCAAAAGTTGCAGCAACAGTTACAAGACATTAAAGAGCAGACAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5
CDS CAA 72 bp AACTTTTGCACATCTGCATTGACATTGGTATTATCCTaGTCCTTTTGTAATACTGGAATATTCCCACTTGAG +
Preference number: 6 (lower is better)
Translates to: NFCTSALTLVLS*SFCNTGIFPLE
Trigger: CTCAAGTGGGAATATTCCAGTATTACAAAAGGACAAGGATAATACCAATGTCAATGCAGATGTGCAAAAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261537.7
ENST00000578646.5