Pregenerated sensors for MGP (Homo sapiens)
Ensembl gene IDs: ENSG00000111341Ensembl transcript IDs: ENST00000228938.5, ENST00000507170.2, ENST00000539261.6, ENST00000545199.5
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACCAGAAGTTTATTATGGAACAATCACATATGTTGACTCTCCTTTaGCCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGC | + |
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Preference number: 1 (lower is better) Translates to: HQKFIMEQSHMLTLL*PSLQCTFITYQSGG Trigger: GCCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGAGAGTCAACATATGTGATTGTTCCATAATAAACTTCTGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| 3UTR CAA 90 bp | ACACCAGAAGTTTATTATGGAACAATCACATATGTTGACTCTCCTTaGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: TPEVYYGTITYVDSP*TLTAVHFHYLSIWG Trigger: CCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGAGAGTCAACATATGTGATTGTTCCATAATAAACTTCTGGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| 3UTR-3UTR TCA 90 bp | GCAAATGAAGGGAGCCCTGTATTTGCCACAATTTACAATAGGAAAATCCTGCAAAACAATCACATATGTTaGCTCTCCTTTGACCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: ANEGSPVFATIYNRKILQNNHIC*LSFDPH Trigger: GTGAGGGTCAAAGGAGAGTCAACATATGTGATTGTT...TTGCAGGATTTTCCTATTGTAAATTGTGGCAAATACAGGGCTCCCTTCATTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539261.6 |
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| 3UTR-3UTR CAA 90 bp | GCAAATGAAGGGAGCCCTGTATTTGCCACAATTTACAATAGGAAAATCCTGCAATATGTTGACTCTCCTTaGACCCTCACTGCAGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: ANEGSPVFATIYNRKILQYVDSP*TLTAVH Trigger: GTGCACTGCAGTGAGGGTCAAAGGAGAGTCAACATA...TTGCAGGATTTTCCTATTGTAAATTGTGGCAAATACAGGGCTCCCTTCATTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539261.6 |
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| 3UTR TCA 72 bp | CACACCAGAAGTTTATTATGGAACAATCACATATGTTaGCTCTCCTTTGACCCTCACTGCAGTGCACTTTCA | + |
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Preference number: 3 (lower is better) Translates to: HTRSLLWNNHIC*LSFDPHCSALS Trigger: TGAAAGTGCACTGCAGTGAGGGTCAAAGGAGAGTCAACATATGTGATTGTTCCATAATAAACTTCTGGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR GCA 90 bp | TCCTTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGCGGGATTCATGGTTTCGTCCTaGAGGTCAGTCTCAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SFDPHCSALSLLINLGAGFMVSS*RSVSGS Trigger: AGACCCTGAGACTGACCTGCAGGACGAAACCATGAA...TCCCGCCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS-3UTR GCA 90 bp | TCTCCTTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGCGGGATTCCTGGGCACGATaGCAGTTCAGAGAGAGAACT | + |
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Preference number: 4 (lower is better) Translates to: SPLTLTAVHFHYLSIWGRDSWAR*QFRERT Trigger: AGTTCTCTCTCTGAACTGGCATCGTGCCCAGGAATC...CCGCCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000228938.5 |
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| CDS-3UTR CCA 90 bp | TCTCCTTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGCGGTCCCTATTGAGCTCGTaGACAGGCTTAGAGCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SPLTLTAVHFHYLSIWGRSLLSS*TGLERS Trigger: AGAACGCTCTAAGCCTGTCCACGAGCTCAATAGGGA...CCGCCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR CCA 90 bp | ACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGCGGGAAAAAGGGTCCCTATTGAGCTCGTaGACAGGCTTAGAGCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: TLTAVHFHYLSIWGREKGSLLSS*TGLERS Trigger: AGAACGCTCTAAGCCTGTCCACGAGCTCAATAGGGA...CCCTTTTTCCCGCCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR CCA 90 bp | TCCTTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGCGGGACTCTGTTTCACAGGCTaGAGTGCATTGGTATGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SFDPHCSALSLLINLGAGLCFTG*SALVWS Trigger: TGACCATACCAATGCACTCCAGCCTGTGAAACAGAG...TCCCGCCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539261.6 |
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| CDS-3UTR TCA 90 bp | ACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGCGGGAAAAAGGGTCTGCTGAGGGGATATaGAGGTATTTGCATTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TLTAVHFHYLSIWGREKGSAEGI*RYLHFS Trigger: GGAGAAATGCAAATACCTTCATATCCCCTCAGCAGA...CCCTTTTTCCCGCCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS-3UTR TCA 90 bp | GACTCTCCTTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGCAGGCAGAAAGGAAGTaGCACCAGATGGAAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: DSPLTLTAVHFHYLSIWGQAERK*HQMERR Trigger: TCTTCTTTCCATCTGGTGTCACTTCCTTTCTGCCTG...CCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGAGAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539261.6 |
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| CDS-3UTR GCA 90 bp | GACTCTCCTTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGTTTCACAGGCTGGAGTaGATTGGTATGGTCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: DSPLTLTAVHFHYLSIWGFHRLE*IGMVMA Trigger: AGCCATGACCATACCAATGCACTCCAGCCTGTGAAA...CCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGAGAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539261.6 |
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| CDS-3UTR CCA 90 bp | GTTGACTCTCCTTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGATCAGGCTCTTCATaGTTTCGTCCTGCAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: VDSPLTLTAVHFHYLSIWGSGSS*FRPAGQ Trigger: CTGACCTGCAGGACGAAACCATGAAGAGCCTGATCC...CCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGAGAGTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS-3UTR CCA 90 bp | GACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGCGGGAAAAAGGTGTATCCATAAACCATaGCGTAGCGTTCGCAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: DPHCSALSLLINLGAGKRCIHKP*RSVRKV Trigger: GACTTTGCGAACGCTACGCCATGGTTTATGGATACA...CCTTTTTCCCGCCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR TCA 90 bp | CTGTTTCACAGGCTGGAGTGCATTGGTATGGTCATGGCTACTGAGATTACAGGTTCTGCTGAGGGGATATaGAGGTATTTGCATTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LFHRLECIGMVMATEITGSAEGI*RYLHFS Trigger: GGAGAAATGCAAATACCTTCATATCCCCTCAGCAGA...ACCTGTAATCTCAGTAGCCATGACCATACCAATGCACTCCAGCCTGTGAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539261.6 |
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| CDS-3UTR GCA 90 bp | GACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGCGGGAAAAAGGTCCTTTGACCCTCACTaGAGTGCACTTTCATTACTT | + |
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Preference number: 4 (lower is better) Translates to: DPHCSALSLLINLGAGKRSFDPH*SALSLL Trigger: AAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGA...CCTTTTTCCCGCCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR CCA 90 bp | ACATATGTTGACTCTCCTTTGACCCTCACTGCAGTGCACTTTCATTACTTATCACTAAGGCGGCCAGGATaGCAAGAAGGATCAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TYVDSPLTLTAVHFHYLSLRRPG*QEGSGS Trigger: AGAGCCTGATCCTTCTTGCCATCCTGGCCGCCTTAG...TGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGAGAGTCAACATATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS-3UTR CCA 90 bp | CTATGTATTTCTGTAATGCTGCTACAGGGGGATACAAAATCAGGTGCCAGCCTCTCTCGGATCCTCTCTTaGACTTTAGCTCTCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: LCISVMLLQGDTKSGASLSRILS*TLALHL Trigger: GAGATGGAGAGCTAAAGTCCAAGAGAGGATCCGAGA...GAGGCTGGCACCTGATTTTGTATCCCCCTGTAGCAGCATTACAGAAATACATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS-3UTR TCA 90 bp | GAAAGAAGCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGGGATCCCTCGGCGCTTCCTaGAGTAGCGATTATAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ERSIVYKPMYFCNAATGGSLGAS*SSDYRQ Trigger: CTGCCTATAATCGCTACTTCAGGAAGCGCCGAGGGA...TCCCCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGCTTCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR GCA 90 bp | GACTCTCCTTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGTCCTTTGACCCTCACTaGAGTGCACTTTCATTACTT | + |
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Preference number: 4 (lower is better) Translates to: DSPLTLTAVHFHYLSIWGSFDPH*SALSLL Trigger: AAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGA...CCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGAGAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR GCA 90 bp | TCCTTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGCGGGAGCCAGAGATAAAAGATaGAGTATACACAGTGGAACA | + |
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Preference number: 4 (lower is better) Translates to: SFDPHCSALSLLINLGAGARDKR*SIHSGT Trigger: TGTTCCACTGTGTATACTGCATCTTTTATCTCTGGC...TCCCGCCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000539261.6 |
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| CDS-3UTR CCA 90 bp | GGTGCAGCCAGACAAGAGAATATACAGGAAAGAAGCATTGTATATAAGCCTATGGGATCAGGCTCTTCATaGTTTCGTCCTGCAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GAARQENIQERSIVYKPMGSGSS*FRPAGQ Trigger: CTGACCTGCAGGACGAAACCATGAAGAGCCTGATCC...CATAGGCTTATATACAATGCTTCTTTCCTGTATATTCTCTTGTCTGGCTGCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS-3UTR TCA 90 bp | GCAAATGAAGGGAGCCCTGTATTTGCCACAATTTACAATAGGAAAATCCTGCAATATGGTCATGGCTACTaGGATTACAGGTGTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: ANEGSPVFATIYNRKILQYGHGY*DYRCGH Trigger: GTGGCCACACCTGTAATCTCAGTAGCCATGACCATA...TTGCAGGATTTTCCTATTGTAAATTGTGGCAAATACAGGGCTCCCTTCATTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539261.6 |
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| CDS-3UTR CCA 90 bp | GCAGCCAGACAAGAGAATATACAGGAAAGAAGCATTGTATATAAGCCTATGTATCTAAGGCGGCCAGGATaGCAAGAAGGATCAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: AARQENIQERSIVYKPMYLRRPG*QEGSGS Trigger: AGAGCCTGATCCTTCTTGCCATCCTGGCCGCCTTAG...ATACATAGGCTTATATACAATGCTTCTTTCCTGTATATTCTCTTGTCTGGCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS-3UTR CCA 90 bp | AGCCTATGTATTTCTGTAATGCTGCTACAGGGGGATACAAAATCAGGTGCCAGCTGGAGTGCATTGGTATaGTCATGGCTACTGAGATTA | + |
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Preference number: 4 (lower is better) Translates to: SLCISVMLLQGDTKSGASWSALV*SWLLRL Trigger: TAATCTCAGTAGCCATGACCATACCAATGCACTCCA...GCTGGCACCTGATTTTGTATCCCCCTGTAGCAGCATTACAGAAATACATAGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000539261.6 |
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| CDS-3UTR CCA 90 bp | AAAGGGGTGCAGCCAGACAAGAGAATATACAGGAAAGAAGCATTGTATATAAGCCTTTCATGTGATTCCTaGGCACGATGCCAGTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: KGVQPDKRIYRKEALYISLSCDS*ARCQFR Trigger: TCTGAACTGGCATCGTGCCCAGGAATCACATGAAAG...GCTTATATACAATGCTTCTTTCCTGTATATTCTCTTGTCTGGCTGCACCCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228938.5 |
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| CDS-3UTR CCA 90 bp | AGGAAAGAAGCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGGTCCCTATTGAGCTCGTaGACAGGCTTAGAGCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: RKEALYISLCISVMLLQGSLLSS*TGLERS Trigger: AGAACGCTCTAAGCCTGTCCACGAGCTCAATAGGGA...CCCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGCTTCTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR CCA 90 bp | CAGGAAAGAAGCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGTGTGGCCACTGTGCCTaGCCCGGGATATTTTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: QERSIVYKPMYFCNAATGCGHCA*PGIFSY Trigger: ATAAGAAAATATCCCGGGCCAGGCACAGTGGCCACA...CCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGCTTCTTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539261.6 |
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| CDS-3UTR TCA 90 bp | GAAGCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGGGATACAGCTCTCCATCTCTGCTaGGGGGATATGAAGGTATTT | + |
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Preference number: 4 (lower is better) Translates to: EALYISLCISVMLLQGDTALHLC*GDMKVF Trigger: AAATACCTTCATATCCCCTCAGCAGAGATGGAGAGC...TGTATCCCCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS-3UTR GCA 90 bp | AGCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGGGATACAAATTCATGGTTTCGTCCTaGAGGTCAGTCTCAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SIVYKPMYFCNAATGGYKFMVSS*RSVSGS Trigger: AGACCCTGAGACTGACCTGCAGGACGAAACCATGAA...TTTGTATCCCCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS-3UTR GCA 90 bp | ATCACACCAGAAGTTTATTATGGAACAATCACATATGTTGACTCTCCTTTGACCGGCGGGAAAAAGGGGTaGAGCCAGACAAGAGAATAT | + |
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Preference number: 4 (lower is better) Translates to: ITPEVYYGTITYVDSPLTGGKKG*SQTREY Trigger: ATATTCTCTTGTCTGGCTGCACCCCTTTTTCCCGCC...GGTCAAAGGAGAGTCAACATATGTGATTGTTCCATAATAAACTTCTGGTGTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR CCA 90 bp | AAAGGGGTGCAGCCAGACAAGAGAATATACAGGAAAGAAGCATTGTATATAAGCTGTATCCATAAACCATaGCGTAGCGTTCGCAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: KGVQPDKRIYRKEALYISCIHKP*RSVRKV Trigger: GACTTTGCGAACGCTACGCCATGGTTTATGGATACA...GCTTATATACAATGCTTCTTTCCTGTATATTCTCTTGTCTGGCTGCACCCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR CCA 90 bp | GGTGCAGCCAGACAAGAGAATATACAGGAAAGAAGCATTGTATATAAGCCTATGTGTATCCATAAACCATaGCGTAGCGTTCGCAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: GAARQENIQERSIVYKPMCIHKP*RSVRKV Trigger: GACTTTGCGAACGCTACGCCATGGTTTATGGATACA...CATAGGCTTATATACAATGCTTCTTTCCTGTATATTCTCTTGTCTGGCTGCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR TCA 90 bp | AGCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGGGATACAAAGCTCTCCATCTCTGCTaGGGGGATATGAAGGTATTT | + |
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Preference number: 4 (lower is better) Translates to: SIVYKPMYFCNAATGGYKALHLC*GDMKVF Trigger: AAATACCTTCATATCCCCTCAGCAGAGATGGAGAGC...TTTGTATCCCCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS-3UTR TCA 90 bp | ACATATGTTGACTCTCCTTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAAACAATCACATATGTTaGCTCTCCTTTGACCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: TYVDSPLTLTAVHFHYLSNNHIC*LSFDPH Trigger: GTGAGGGTCAAAGGAGAGTCAACATATGTGATTGTT...TGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGAGAGTCAACATATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR CCA 90 bp | ATCACACCAGAAGTTTATTATGGAACAATCACATATGTTGACTCTCCTTTGACCTCTCGGATCCTCTCTTaGACTTTAGCTCTCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: ITPEVYYGTITYVDSPLTSRILS*TLALHL Trigger: GAGATGGAGAGCTAAAGTCCAAGAGAGGATCCGAGA...GGTCAAAGGAGAGTCAACATATGTGATTGTTCCATAATAAACTTCTGGTGTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS-3UTR TCA 90 bp | GAAAGAAGCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGGGAAACAATCACATATGTTaGCTCTCCTTTGACCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: ERSIVYKPMYFCNAATGGNNHIC*LSFDPH Trigger: GTGAGGGTCAAAGGAGAGTCAACATATGTGATTGTT...TCCCCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGCTTCTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR GCA 90 bp | TATGTTGACTCTCCTTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCGTTCATAAGATTCCATaGTTTCATGTGATTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: YVDSPLTLTAVHFHYLSIVHKIP*FHVIPG Trigger: CCCAGGAATCACATGAAAGCATGGAATCTTATGAAC...GATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGAGAGTCAACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228938.5 |
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| CDS-3UTR CCA 90 bp | TATGTTGACTCTCCTTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCGGTTTAGAGAATTTATaGCTGAGTGAGTGCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: YVDSPLTLTAVHFHYLSIGLENL*LSECLL Trigger: AAGAAGGCACTCACTCAGCCATAAATTCTCTAAACC...GATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGAGAGTCAACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539261.6 |
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| CDS-3UTR CCA 90 bp | GCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGGGATACAAAAGCATTGGTATGGTCATaGCTACTGAGATTACAGGTG | + |
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Preference number: 4 (lower is better) Translates to: ALYISLCISVMLLQGDTKALVWS*LLRLQV Trigger: CACCTGTAATCTCAGTAGCCATGACCATACCAATGC...TTTTGTATCCCCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000539261.6 |
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| CDS-3UTR TCA 90 bp | GCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGGGATACAAAAAACAATCACATATGTTaGCTCTCCTTTGACCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: ALYISLCISVMLLQGDTKNNHIC*LSFDPH Trigger: GTGAGGGTCAAAGGAGAGTCAACATATGTGATTGTT...TTTTGTATCCCCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR GCA 90 bp | GCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGGGATACAAAATCCTTTGACCCTCACTaGAGTGCACTTTCATTACTT | + |
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Preference number: 4 (lower is better) Translates to: ALYISLCISVMLLQGDTKSFDPH*SALSLL Trigger: AAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGA...TTTTGTATCCCCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR CCA 90 bp | GAAAGAAGCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGGGAAGAAACGTGGCAACTTaGGATTCAATATACAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: ERSIVYKPMYFCNAATGGRNVAT*DSIYSE Trigger: TTCACTGTATATTGAATCCCAAGTTGCCACGTTTCT...TCCCCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGCTTCTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539261.6 |
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| 3UTR CAA 72 bp | GTTTATTATGGAACAATCACATATGTTGACTCTCCTTaGACCCTCACTGCAGTGCACTTTCATTACTTATCA | + |
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Preference number: 4 (lower is better) Translates to: VYYGTITYVDSP*TLTAVHFHYLS Trigger: TGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGAGAGTCAACATATGTGATTGTTCCATAATAAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR CCA 90 bp | GAAAGAAGCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGGGAATGCAGTATACACAGTaGAACAAAGGTAAGAATTAC | + |
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Preference number: 4 (lower is better) Translates to: ERSIVYKPMYFCNAATGGMQYTQ*NKGKNY Trigger: GTAATTCTTACCTTTGTTCCACTGTGTATACTGCAT...TCCCCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGCTTCTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539261.6 |
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| CDS GCA 90 bp | GCGGCCAGGATGGCAAGAAGGATCAGGCTCTTCATGGTTTCGTCCTaGAGGTCAGTCTCAGGGTCTTGTGTAGCAGCAGTAGGGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: AARMARRIRLFMVSS*RSVSGSCVAAVGRE Trigger: CTCTCTCCCTACTGCTGCTACACAAGACCCTGAGACTGACCTGCAGGACGAAACCATGAAGAGCCTGATCCTTCTTGCCATCCTGGCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000507170.2 ENST00000539261.6 |
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| CDS CCA 90 bp | GCCACTCTCCATAACACAAAGTTACTACCGCTAAGGCGGCCAGGATaGCAAGAAGGATCAGGCTCTTCATGGTTTCGTCCTGCAGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: ATLHNTKLLPLRRPG*QEGSGSSWFRPAGQ Trigger: CTGACCTGCAGGACGAAACCATGAAGAGCCTGATCCTTCTTGCCATCCTGGCCGCCTTAGCGGTAGTAACTTTGTGTTATGGAGAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228938.5 |
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| CDS TCA 90 bp | ACCAAAACAGCACTCAGCTTAACGTGGCGCCTGTGGTCTCCCAGCTaGCTTGGCGTCCAGCTCTGTGCTTTACCATTTGTCATTACTCCT | + |
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Preference number: 5 (lower is better) Translates to: TKTALSLTWRLWSPS*LGVQLCALPFVITP Trigger: AGGAGTAATGACAAATGGTAAAGCACAGAGCTGGACGCCAAGTCAGCTGGGAGACCACAGGCGCCACGTTAAGCTGAGTGCTGTTTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507170.2 |
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| CDS GCA 90 bp | AACGTGGCGCCTGTGGTCTCCCAGCTGACTTGGCGTCCAGCTCTGTaGTTTACCATTTGTCATTACTCCTCGTTTTCCATCTGTGCAGTT | + |
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Preference number: 5 (lower is better) Translates to: NVAPVVSQLTWRPAL*FTICHYSSFSICAV Trigger: AACTGCACAGATGGAAAACGAGGAGTAATGACAAATGGTAAAGCACAGAGCTGGACGCCAAGTCAGCTGGGAGACCACAGGCGCCACGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507170.2 |
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| CDS CCA 90 bp | CATGTGATTCATAACACAAAGTTACTACCGCTAAGGCGGCCAGGATaGCAAGAAGGATCAGGCTCTTCATGGTTTCGTCCTGCAGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: HVIHNTKLLPLRRPG*QEGSGSSWFRPAGQ Trigger: CTGACCTGCAGGACGAAACCATGAAGAGCCTGATCCTTCTTGCCATCCTGGCCGCCTTAGCGGTAGTAACTTTGTGTTATGAATCACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507170.2 ENST00000539261.6 |
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| CDS-3UTR CAA 90 bp | TTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGCGGGAAAAGTCAGTCTCAGGGTCTaGTGTAGCAGCAGTAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: FDPHCSALSLLINLGAGKVSLRV*CSSSRE Trigger: CTCCCTACTGCTGCTACACAAGACCCTGAGACTGAC...TTTTCCCGCCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS-3UTR CAA 90 bp | GTTGACTCTCCTTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGTTCCCTCAGTCTCATTaGGTCCCTCGGCGCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: VDSPLTLTAVHFHYLSIWFPQSH*VPRRFL Trigger: CAGGAAGCGCCGAGGGACCAAATGAGACTGAGGGAA...CCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGAGAGTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR CAA 90 bp | ACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGCGGGAAAAAGGGTATGTTGACTCTCCTTaGACCCTCACTGCAGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: TLTAVHFHYLSIWGREKGYVDSP*TLTAVH Trigger: GTGCACTGCAGTGAGGGTCAAAGGAGAGTCAACATA...CCCTTTTTCCCGCCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR CAA 90 bp | GACTCTCCTTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGTATGTTGACTCTCCTTaGACCCTCACTGCAGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: DSPLTLTAVHFHYLSIWGYVDSP*TLTAVH Trigger: GTGCACTGCAGTGAGGGTCAAAGGAGAGTCAACATA...CCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAAGGAGAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR CAA 90 bp | GGTGCAGCCAGACAAGAGAATATACAGGAAAGAAGCATTGTATATAAGCCTATGTTCCCTCAGTCTCATTaGGTCCCTCGGCGCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GAARQENIQERSIVYKPMFPQSH*VPRRFL Trigger: CAGGAAGCGCCGAGGGACCAAATGAGACTGAGGGAA...CATAGGCTTATATACAATGCTTCTTTCCTGTATATTCTCTTGTCTGGCTGCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR CAA 90 bp | TTTGACCCTCACTGCAGTGCACTTTCATTACTTATCAATCTGGGGGCGGGAAAATTCTCGGATCCTCTCTaGGACTTTAGCTCTCCATCT | + |
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Preference number: 5 (lower is better) Translates to: FDPHCSALSLLINLGAGKFSDPL*DFSSPS Trigger: AGATGGAGAGCTAAAGTCCAAGAGAGGATCCGAGAA...TTTTCCCGCCCCCAGATTGATAAGTAATGAAAGTGCACTGCAGTGAGGGTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS-3UTR CAA 90 bp | AGGGGTGCAGCCAGACAAGAGAATATACAGGAAAGAAGCATTGTATATAAGCCTTATGTTGACTCTCCTTaGACCCTCACTGCAGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: RGAARQENIQERSIVYKPYVDSP*TLTAVH Trigger: GTGCACTGCAGTGAGGGTCAAAGGAGAGTCAACATA...AGGCTTATATACAATGCTTCTTTCCTGTATATTCTCTTGTCTGGCTGCACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR CAA 90 bp | AGCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGGGATACAAAGTCAGTCTCAGGGTCTaGTGTAGCAGCAGTAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: SIVYKPMYFCNAATGGYKVSLRV*CSSSRE Trigger: CTCCCTACTGCTGCTACACAAGACCCTGAGACTGAC...TTTGTATCCCCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS-3UTR CAA 90 bp | AGAAGCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGGGATACTCACAGGCTTCCCTATaGAGCTCGTGGACAGGCTTA | + |
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Preference number: 5 (lower is better) Translates to: RSIVYKPMYFCNAATGGYSQASL*SSWTGL Trigger: TAAGCCTGTCCACGAGCTCAATAGGGAAGCCTGTGA...GTATCCCCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS-3UTR CAA 90 bp | AGCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGGGATACAAATTCTCGGATCCTCTCTaGGACTTTAGCTCTCCATCT | + |
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Preference number: 5 (lower is better) Translates to: SIVYKPMYFCNAATGGYKFSDPL*DFSSPS Trigger: AGATGGAGAGCTAAAGTCCAAGAGAGGATCCGAGAA...TTTGTATCCCCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS GCA 90 bp | TTGGACTTTAGCTCTCCATCTCTGCTGAGGGGATATGAAGGTATTTaGATTTCTCCTGTTAATGAAGGGATTAAGTTCATAAGATTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LDFSSPSLLRGYEGI*ISPVNEGIKFIRFH Trigger: ATGGAATCTTATGAACTTAATCCCTTCATTAACAGGAGAAATGCAAATACCTTCATATCCCCTCAGCAGAGATGGAGAGCTAAAGTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS-3UTR CAA 90 bp | AGAAGCATTGTATATAAGCCTATGTATTTCTGTAATGCTGCTACAGGGGGATACGACAGTTTTTGCCAATaGCTTTTATTTGTCCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: RSIVYKPMYFCNAATGGYDSFCQ*LLFVPS Trigger: AGAAGGGACAAATAAAAGCAATTGGCAAAAACTGTC...GTATCCCCCTGTAGCAGCATTACAGAAATACATAGGCTTATATACAATGCTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000539261.6 |
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| CDS TCA 90 bp | CAATCCATGTGTCTTAGAGACTTGTCATATAGGCTTTGTTGGTTTTaGGTTTGGACGATCACTTTGCCTTTCTTAATTTCTGTATTTCTA | + |
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Preference number: 5 (lower is better) Translates to: QSMCLRDLSYRLCWF*VWTITLPFLISVFL Trigger: TAGAAATACAGAAATTAAGAAAGGCAAAGTGATCGTCCAAACTCAAAACCAACAAAGCCTATATGACAAGTCTCTAAGACACATGGATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507170.2 |
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| CDS TCA 72 bp | GCACTCAGCTTAACGTGGCGCCTGTGGTCTCCCAGCTaGCTTGGCGTCCAGCTCTGTGCTTTACCATTTGTC | + |
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Preference number: 6 (lower is better) Translates to: ALSLTWRLWSPS*LGVQLCALPFV Trigger: GACAAATGGTAAAGCACAGAGCTGGACGCCAAGTCAGCTGGGAGACCACAGGCGCCACGTTAAGCTGAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507170.2 |
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| CDS CCA 72 bp | AGGCGGCCAGGATGGCAAGAAGGATCAGGCTCTTCATaGTTTCGTCCTGCAGGTCAGTCTCAGGGTCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: RRPGWQEGSGSS*FRPAGQSQGLV Trigger: CACAAGACCCTGAGACTGACCTGCAGGACGAAACCATGAAGAGCCTGATCCTTCTTGCCATCCTGGCCGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000507170.2 ENST00000539261.6 |
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| CDS CAA 72 bp | CTTCATGGTTTCGTCCTGCAGGTCAGTCTCAGGGTCTaGTGTAGCAGCAGTAGGGAGAGAGGCTCCTACGGG | + |
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Preference number: 6 (lower is better) Translates to: LHGFVLQVSLRV*CSSSRERGSYG Trigger: CCCGTAGGAGCCTCTCTCCCTACTGCTGCTACACAAGACCCTGAGACTGACCTGCAGGACGAAACCATGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228938.5 |
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| CDS GCA 72 bp | ATGGCAAGAAGGATCAGGCTCTTCATGGTTTCGTCCTaGAGGTCAGTCTCAGGGTCTTGTGTAGCAGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: MARRIRLFMVSS*RSVSGSCVAAV Trigger: TACTGCTGCTACACAAGACCCTGAGACTGACCTGCAGGACGAAACCATGAAGAGCCTGATCCTTCTTGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000507170.2 ENST00000539261.6 |
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| CDS GCA 72 bp | CCTGTGGTCTCCCAGCTGACTTGGCGTCCAGCTCTGTaGTTTACCATTTGTCATTACTCCTCGTTTTCCATC | + |
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Preference number: 6 (lower is better) Translates to: PVVSQLTWRPAL*FTICHYSSFSI Trigger: GATGGAAAACGAGGAGTAATGACAAATGGTAAAGCACAGAGCTGGACGCCAAGTCAGCTGGGAGACCACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507170.2 |
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| CDS CCA 72 bp | CATAACACAAAGTTACTACCGCTAAGGCGGCCAGGATaGCAAGAAGGATCAGGCTCTTCATGGTTTCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: HNTKLLPLRRPG*QEGSGSSWFRP Trigger: AGGACGAAACCATGAAGAGCCTGATCCTTCTTGCCATCCTGGCCGCCTTAGCGGTAGTAACTTTGTGTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000507170.2 ENST00000539261.6 |
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| CDS TCA 72 bp | TCTTCCCTCAGTCTCATTTGGTCCCTCGGCGCTTCCTaGAGTAGCGATTATAGGCAGCATTGTATCCATAAA | + |
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Preference number: 6 (lower is better) Translates to: SSLSLIWSLGAS*SSDYRQHCIHK Trigger: TTTATGGATACAATGCTGCCTATAATCGCTACTTCAGGAAGCGCCGAGGGACCAAATGAGACTGAGGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS CCA 72 bp | AGTAGCGATTATAGGCAGCATTGTATCCATAAACCATaGCGTAGCGTTCGCAAAGTCTGTAGTCATCACAGG | + |
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Preference number: 6 (lower is better) Translates to: SSDYRQHCIHKP*RSVRKVCSHHR Trigger: CCTGTGATGACTACAGACTTTGCGAACGCTACGCCATGGTTTATGGATACAATGCTGCCTATAATCGCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000228938.5 ENST00000539261.6 ENST00000545199.5 |
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| CDS GCA 72 bp | AGCTCTCCATCTCTGCTGAGGGGATATGAAGGTATTTaGATTTCTCCTGTTAATGAAGGGATTAAGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: SSPSLLRGYEGI*ISPVNEGIKFI Trigger: TATGAACTTAATCCCTTCATTAACAGGAGAAATGCAAATACCTTCATATCCCCTCAGCAGAGATGGAGAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000228938.5 ENST00000539261.6 |
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| CDS TCA 72 bp | CATTTGTCATTACTCCTCGTTTTCCATCTGTGCAGTTaGCGTGGTGCCAATTTAAAATTTCCAAATGAGATT | + |
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Preference number: 6 (lower is better) Translates to: HLSLLLVFHLCS*RGANLKFPNEI Trigger: AATCTCATTTGGAAATTTTAAATTGGCACCACGTCAACTGCACAGATGGAAAACGAGGAGTAATGACAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507170.2 |
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| CDS TCA 72 bp | TGTCTTAGAGACTTGTCATATAGGCTTTGTTGGTTTTaGGTTTGGACGATCACTTTGCCTTTCTTAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: CLRDLSYRLCWF*VWTITLPFLIS Trigger: AGAAATTAAGAAAGGCAAAGTGATCGTCCAAACTCAAAACCAACAAAGCCTATATGACAAGTCTCTAAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507170.2 |
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