RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MGAT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000131446

Ensembl transcript IDs: ENST00000307826.5, ENST00000333055.8, ENST00000393340.7, ENST00000427865.2, ENST00000446023.6, ENST00000502678.1, ENST00000504385.5, ENST00000504671.1, ENST00000505682.1, ENST00000506033.1, ENST00000506269.1, ENST00000506708.1, ENST00000506889.1, ENST00000507384.1, ENST00000508090.1, ENST00000508702.1, ENST00000510341.1, ENST00000510962.1, ENST00000512080.1, ENST00000512695.1, ENST00000513149.1, ENST00000513431.5, ENST00000514283.1, ENST00000514438.1

Found 1139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTCACGGGCCCAGAGCAGGGCCGGCCCAGGCCCACCGCACTCTATaGCATCGGCCACCAGGCTGGTCTCCAGGAAATAGGGCCCTGGTG +
Preference number: 1 (lower is better)
Translates to: GHGPRAGPAQAHRTL*HRPPGWSPGNRALV
Trigger: CACCAGGGCCCTATTTCCTGGAGACCAGCCTGGTGGCCGATGTCATAGAGTGCGGTGGGCCTGGGCCGGCCCTGCTCTGGGCCCGTGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp GCCTGCTCTGAGGGCTTCGTCTCCGTTTCCCTGGCCCCTCAGCCTTaGCAGGCTTCTCATGCAGGGCCCAGTGAAGGCTCAGGAGGGCCT +
Preference number: 1 (lower is better)
Translates to: ACSEGFVSVSLAPQP*QASHAGPSEGSGGP
Trigger: AGGCCCTCCTGAGCCTTCACTGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGAAGCCCTCAGAGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp TGTTACCCCCGCCTCACAGGAAGAGGCTCTGGCAGGAAGAACAGCTaGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCG +
Preference number: 1 (lower is better)
Translates to: CYPRLTGRGSGRKNS*TRVRHAGHGPRAGP
Trigger: CGGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTCCTGCCAGAGCCTCTTCCTGTGAGGCGGGGGTAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp CTCCCACCCTCTTGGCCTGCTCTGAGGGCTTCGTCTCCGTTTCCCTaGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCAGTGAAG +
Preference number: 1 (lower is better)
Translates to: LPPSWPALRASSPFP*PLSLGRLLMQGPVK
Trigger: CTTCACTGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGAAGCCCTCAGAGCAGGCCAAGAGGGTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp GGCTGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTaGTCACTGCTCCACCTCATGCTGAGAGGAGCCTGTGTGTCAAAC +
Preference number: 1 (lower is better)
Translates to: GWAALGQRRPGHCST*SLLHLMLRGACVSN
Trigger: GTTTGACACACAGGCTCCTCTCAGCATGAGGTGGAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR GCA 90 bp AGCCAGCAGGAGGCAGAAGCAGGAGACACTCACCAGCTTTCCTGCTaGGGCCTCCTGGCTCTACAGGACGATCAGCAGGAGCACAGTCCG +
Preference number: 1 (lower is better)
Translates to: SQQEAEAGDTHQLSC*GLLALQDDQQEHSP
Trigger: CGGACTGTGCTCCTGCTGATCGTCCTGTAGAGCCAGGAGGCCGCAGCAGGAAAGCTGGTGAGTGTCTCCTGCTTCTGCCTCCTGCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp CAGGAACCCACAGTGAGAGCAGGAGTGGCAGGAGGTGGTCACAGCTaGAGGCAGAAGCAGGAATGCAGCAGCAGCAGCAGCCAGGCGCAA +
Preference number: 1 (lower is better)
Translates to: QEPTVRAGVAGGGHS*RQKQECSSSSSQAQ
Trigger: TTGCGCCTGGCTGCTGCTGCTGCTGCATTCCTGCTTCTGCCTCCAGCTGTGACCACCTCCTGCCACTCCTGCTCTCACTGTGGGTTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 90 bp GTGCTAAGAAGAGTGAGACTGAGACCTGAGAAGGAGCCTGGGCCCTaGCGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCTC +
Preference number: 1 (lower is better)
Translates to: VLRRVRLRPEKEPGP*RWRNPHTSLHHRPL
Trigger: GAGAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCTCCTTCTCAGGTCTCAGTCTCACTCTTCTTAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 90 bp CAGCGTCCTGCAGGCCCCTCCTCAGGGAAGGCCCTCGGTGAAGAGTaGGGCCTGATCGCCGCTCACCTACTCCTGATCCTGAAAGGTTTT +
Preference number: 1 (lower is better)
Translates to: QRPAGPSSGKALGEE*GLIAAHLLLILKGF
Trigger: AAAACCTTTCAGGATCAGGAGTAGGTGAGCGGCGATCAGGCCTCACTCTTCACCGAGGGCCTTCCCTGAGGAGGGGCCTGCAGGACGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 90 bp CTTCTTACAGCTGTGCTGAGACGTTTTTGGCTGGGGCAGGGCTGCTaGACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGCCAGAC +
Preference number: 1 (lower is better)
Translates to: LLTAVLRRFWLGQGC*TEGASHLLQGRQPD
Trigger: GTCTGGCTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAGCCAAAAACGTCTCAGCACAGCTGTAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 90 bp CCTCTTCTTACAGCTGTGCTGAGACGTTTTTGGCTGGGGCAGGGCTaGTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGCCA +
Preference number: 1 (lower is better)
Translates to: PLLTAVLRRFWLGQG*CTEGASHLLQGRQP
Trigger: TGGCTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAGCCAAAAACGTCTCAGCACAGCTGTAAGAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp GGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCTaGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAG +
Preference number: 1 (lower is better)
Translates to: GLVPWLEEPGQGEGV*SRERTLPNSLHMLQ
Trigger: CTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR CCA 90 bp TGCATGACATGCTATGCGCATGGAGCGTGGCGGCCAAACTCCTCCTaGCTCCACCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATT +
Preference number: 1 (lower is better)
Translates to: CMTCYAHGAWRPNSS*LHRKGHNAAIAGPI
Trigger: AATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGGTGGAGCCAGGAGGAGTTTGGCCGCCACGCTCCATGCGCATAGCATGTCATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp CCAAGAGGCTTGAGGAGGGAAGGCTGCCCGGAAGGCAGTCTGTCCTaGAGACAGAGTGAGCAGGAACCCACAGTGAGAGCAGGAGTGGCA +
Preference number: 1 (lower is better)
Translates to: PRGLRREGCPEGSLS*RQSEQEPTVRAGVA
Trigger: TGCCACTCCTGCTCTCACTGTGGGTTCCTGCTCACTCTGTCTCCAGGACAGACTGCCTTCCGGGCAGCCTTCCCTCCTCAAGCCTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp CCACCACAGAAGGTTGTGTTACCCCCGCCTCACAGGAAGAGGCTCTaGCAGGAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGG +
Preference number: 1 (lower is better)
Translates to: PPQKVVLPPPHRKRL*QEEQLDPSQTRRSR
Trigger: CCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTCCTGCCAGAGCCTCTTCCTGTGAGGCGGGGGTAACACAACCTTCTGTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp TGTCCCAGCACAAGGCCTTCCTCCCTGCACCTCTCTCCTGACAGCTaGGCATGGGCTGAGGAGAGGTCTTGCTTGCCCCCTTCAACTTTC +
Preference number: 1 (lower is better)
Translates to: CPSTRPSSLHLSPDS*AWAEERSCLPPSTF
Trigger: GAAAGTTGAAGGGGGCAAGCAAGACCTCTCCTCAGCCCATGCCCAGCTGTCAGGAGAGAGGTGCAGGGAGGAAGGCCTTGTGCTGGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR TCA 90 bp TCCAAGCGCCACTGTGAGGCCAACCCTGGTATCAGCTGTGTACCCTaGGGCTCCCCGGCACGTCATAAAGGGCACTCAATAAGCACTGCC +
Preference number: 1 (lower is better)
Translates to: SKRHCEANPGISCVP*GSPARHKGHSISTA
Trigger: GGCAGTGCTTATTGAGTGCCCTTTATGACGTGCCGGGGAGCCTCAGGGTACACAGCTGATACCAGGGTTGGCCTCACAGTGGCGCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 90 bp GTGCATCCCACCTCCTGCAGGGAAGGCAGCCAGACCACATTCCAGTaGGTGGAACGTGAGGGAAGGCTGTCTGCCCACTGCTTTTGTTCC +
Preference number: 1 (lower is better)
Translates to: VHPTSCREGSQTTFQ*VEREGRLSAHCFCS
Trigger: GGAACAAAAGCAGTGGGCAGACAGCCTTCCCTCACGTTCCACTCACTGGAATGTGGTCTGGCTGCCTTCCCTGCAGGAGGTGGGATGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 90 bp AGCGTGGCGGCCAAACTCCTCCTGGCTCCACCGGAAAGGGCACAATaGAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGATAAT +
Preference number: 1 (lower is better)
Translates to: SVAAKLLLAPPERAQ*SYRRADSTSEITDN
Trigger: ATTATCCGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGGTGGAGCCAGGAGGAGTTTGGCCGCCACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 90 bp CAGGTAAGAGGATTGCAAAGGCCAAGAGGCTTGAGGAGGGAAGGCTaGCCGGAAGGCAGTCTGTCCTGGAGACAGAGTGAGCAGGAACCC +
Preference number: 1 (lower is better)
Translates to: QVRGLQRPRGLRREG*PEGSLSWRQSEQEP
Trigger: GGGTTCCTGCTCACTCTGTCTCCAGGACAGACTGCCTTCCGGGCAGCCTTCCCTCCTCAAGCCTCTTGGCCTTTGCAATCCTCTTACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 90 bp GTGAATACCAGGAGACCCCTGAAGGTGCTCCTTGCTTCAGGAGCCTaGGAACCCAGTCTTTCGTCTTGTAAGGGGGTCCTCTGGCACCGC +
Preference number: 1 (lower is better)
Translates to: VNTRRPLKVLLASGA*EPSLSSCKGVLWHR
Trigger: GCGGTGCCAGAGGACCCCCTTACAAGACGAAAGACTGGGTTCTCAGGCTCCTGAAGCAAGGAGCACCTTCAGGGGTCTCCTGGTATTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 90 bp TGTGCCTGTTCTAGCAAGAACCAGGAAGAGGCTGTCTCCCTGCCATaGCCTAATCTAGCAGCCACACAGCCCCATTCCGCTGCCAGCGTC +
Preference number: 1 (lower is better)
Translates to: CACSSKNQEEAVSLP*PNLAATQPHSAASV
Trigger: GACGCTGGCAGCGGAATGGGGCTGTGTGGCTGCTAGATTAGGTCATGGCAGGGAGACAGCCTCTTCCTGGTTCTTGCTAGAACAGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 90 bp CTGCTCCCAAGGCCACGGCCCTCGACACAGCTCCCCAGACAACTCTaGCACCATCTGGTGTCGAGCTCCAAAGTAGTTTCTGCCAAGAAA +
Preference number: 1 (lower is better)
Translates to: LLPRPRPSTQLPRQL*HHLVSSSKVVSAKK
Trigger: TTTCTTGGCAGAAACTACTTTGGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCGTGGCCTTGGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp ACAATGCACTTGGCTAGCTGCATGACATGCTATGCGCATGGAGCGTaGCGGCCAAACTCCTCCTGGCTCCACCGGAAAGGGCACAATGCA +
Preference number: 1 (lower is better)
Translates to: TMHLASCMTCYAHGA*RPNSSWLHRKGHNA
Trigger: TGCATTGTGCCCTTTCCGGTGGAGCCAGGAGGAGTTTGGCCGCCACGCTCCATGCGCATAGCATGTCATGCAGCTAGCCAAGTGCATTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp GTCTCTAGCCATCTTCCTCTTCTTACAGCTGTGCTGAGACGTTTTTaGCTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTG +
Preference number: 1 (lower is better)
Translates to: VSSHLPLLTAVLRRF*LGQGCCTEGASHLL
Trigger: CAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAGCCAAAAACGTCTCAGCACAGCTGTAAGAAGAGGAAGATGGCTAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 90 bp TATCCTGGAGCACTCAGAACAATGCACTTGGCTAGCTGCATGACATaGTATGCGCATGGAGCGTGGCGGCCAAACTCCTCCTGGCTCCAC +
Preference number: 1 (lower is better)
Translates to: YPGALRTMHLASCMT*YAHGAWRPNSSWLH
Trigger: GTGGAGCCAGGAGGAGTTTGGCCGCCACGCTCCATGCGCATAGCATGTCATGCAGCTAGCCAAGTGCATTGTTCTGAGTGCTCCAGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 90 bp GTACTTATCCTGGAGCACTCAGAACAATGCACTTGGCTAGCTGCATaGCATGCTATGCGCATGGAGCGTGGCGGCCAAACTCCTCCTGGC +
Preference number: 1 (lower is better)
Translates to: VLILEHSEQCTWLAA*HAMRMERGGQTPPG
Trigger: GCCAGGAGGAGTTTGGCCGCCACGCTCCATGCGCATAGCATGTCATGCAGCTAGCCAAGTGCATTGTTCTGAGTGCTCCAGGATAAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 90 bp AGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTaGACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGCC +
Preference number: 1 (lower is better)
Translates to: REKGSGQESERCQTL*TCSRRKLRTWTFLA
Trigger: GGCCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR CCA 90 bp AATCCAAGTGCAGCTGGGGAATGGCCTGGAAGAGGCCGTAAAGGCTaGAATGGAACAGTCCAGCCTCACACAGTGGCTAACAGCACAGAG +
Preference number: 1 (lower is better)
Translates to: NPSAAGEWPGRGRKG*NGTVQPHTVANSTE
Trigger: CTCTGTGCTGTTAGCCACTGTGTGAGGCTGGACTGTTCCATTCCAGCCTTTACGGCCTCTTCCAGGCCATTCCCCAGCTGCACTTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp CTCTATGACATCGGCCACCAGGCTGGTCTCCAGGAAATAGGGCCCTaGTGTCTACTTCCTAAACTCCCTGTGAATTGCCAGGGGCCAGAA +
Preference number: 1 (lower is better)
Translates to: LYDIGHQAGLQEIGP*CLLPKLPVNCQGPE
Trigger: TTCTGGCCCCTGGCAATTCACAGGGAGTTTAGGAAGTAGACACCAGGGCCCTATTTCCTGGAGACCAGCCTGGTGGCCGATGTCATAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 90 bp CAGCACAGAGTTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTaGCCTTGGGCAACTTCACCTCTGTGTGCCTGCTTCCTCACTGGT +
Preference number: 1 (lower is better)
Translates to: QHRVHSNPALPQPSV*PWATSPLCACFLTG
Trigger: ACCAGTGAGGAAGCAGGCACACAGAGGTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAACTCTGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 90 bp AAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATaGTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGCCCCAACA +
Preference number: 1 (lower is better)
Translates to: KGSGQESERCQTLCT*SRRKLRTWTFLAPT
Trigger: TGTTGGGGCCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR CCA 90 bp GAAGAGGCCGTAAAGGCTGGAATGGAACAGTCCAGCCTCACACAGTaGCTAACAGCACAGAGTTCATTCCAATCCGGCTCTCCCTCAACC +
Preference number: 1 (lower is better)
Translates to: EEAVKAGMEQSSLTQ*LTAQSSFQSGSPST
Trigger: GGTTGAGGGAGAGCCGGATTGGAATGAACTCTGTGCTGTTAGCCACTGTGTGAGGCTGGACTGTTCCATTCCAGCCTTTACGGCCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp AGCAGCCAGGCGCAAGGCAGCTCTGTAAACCTGCAAACTCGAGGCTaGCTGAACTCTACAGCATTGACTAACACGGGGCTTTTCCATCTG +
Preference number: 1 (lower is better)
Translates to: SSQAQGSSVNLQTRG*LNSTALTNTGLFHL
Trigger: CAGATGGAAAAGCCCCGTGTTAGTCAATGCTGTAGAGTTCAGCCAGCCTCGAGTTTGCAGGTTTACAGAGCTGCCTTGCGCCTGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 90 bp CCTTGGCCAGACTCCATCAGACATTTGTCTCCACTGGGGGCGACTTaGTCCACAAATGAGATCCCACCAGTGACCCAGGTAAGAGGATTG +
Preference number: 1 (lower is better)
Translates to: PWPDSIRHLSPLGAT*STNEIPPVTQVRGL
Trigger: CAATCCTCTTACCTGGGTCACTGGTGGGATCTCATTTGTGGATCAAGTCGCCCCCAGTGGAGACAAATGTCTGATGGAGTCTGGCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 90 bp ACCATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTaGTCTGCAACTGAATCCATTCTGACACACTGTCTTACAGTTCTG +
Preference number: 1 (lower is better)
Translates to: TIDLSFPSGAGIQAS*SATESILTHCLTVL
Trigger: CAGAACTGTAAGACAGTGTGTCAGAATGGATTCAGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 90 bp CTCCATCAGACATTTGTCTCCACTGGGGGCGACTTGATCCACAAATaGGATCCCACCAGTGACCCAGGTAAGAGGATTGCAAAGGCCAAG +
Preference number: 1 (lower is better)
Translates to: LHQTFVSTGGDLIHK*DPTSDPGKRIAKAK
Trigger: CTTGGCCTTTGCAATCCTCTTACCTGGGTCACTGGTGGGATCTCATTTGTGGATCAAGTCGCCCCCAGTGGAGACAAATGTCTGATGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATaGAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAA +
Preference number: 1 (lower is better)
Translates to: IKKINAPKRETQAGR*SLGTVVPPQLMMWQ
Trigger: TTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
3UTR GCA 90 bp GCAAACTCCCGCAGAACTCAGCAGCTTAAAATACCCGTTTCACATTaGCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGG +
Preference number: 1 (lower is better)
Translates to: ANSRRTQQLKIPVSH*PPFVSQKFRQPSAG
Trigger: CCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACGGGTATTTTAAGCTGCTGAGTTCTGCGGGAGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp CAGAATGTGGGTAGGTGGGAGAACAGATGGAGGCTGAAGGACCTCTaGTGGCAAAACACTGACCTCTACAGAGGTCTCATCAGAAAGCCT +
Preference number: 1 (lower is better)
Translates to: QNVGRWENRWRLKDL*WQNTDLYRGLIRKP
Trigger: AGGCTTTCTGATGAGACCTCTGTAGAGGTCAGTGTTTTGCCACCAGAGGTCCTTCAGCCTCCATCTGTTCTCCCACCTACCCACATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 90 bp CTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTaGATCCATTCTGACACACTGTCTTACAGTTCTGGTATAAAGGGT +
Preference number: 1 (lower is better)
Translates to: LISVRRWDPGFLLCN*IHSDTLSYSSGIKG
Trigger: ACCCTTTATACCAGAACTGTAAGACAGTGTGTCAGAATGGATTCAGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp AGAATGTTGCACGTGATATGCAGAGGTAACAGTCTGTCTGTGTTCTaGGTATTAGCAAAACAGGCACTCTCACTGGGGTTGCGTTTGGGA +
Preference number: 1 (lower is better)
Translates to: RMLHVICRGNSLSVF*VLAKQALSLGLRLG
Trigger: TCCCAAACGCAACCCCAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCTGCATATCACGTGCAACATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp AAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAGAGTTCTaGTTTCTACTGTTGCTCAGCAAACTCCCGCAGAACTCAGCAGCT +
Preference number: 1 (lower is better)
Translates to: KSSTVSRTEHSIREF*FLLLLSKLPQNSAA
Trigger: AGCTGCTGAGTTCTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp GTGTGGCAAAATATTCCTCGTTGGATCATGTCAGTGGAAAGAGTATaGTTCTTCTTTGTATTAGTCTTTCAACTTCCCTGTGAGTTTGAA +
Preference number: 1 (lower is better)
Translates to: VWQNIPRWIMSVERV*FFFVLVFQLPCEFE
Trigger: TTCAAACTCACAGGGAAGTTGAAAGACTAATACAAAGAAGAACCATACTCTTTCCACTGACATGATCCAACGAGGAATATTTTGCCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp TTCTATCAAGTGGTACAGAAAATTATACGGTATATATTTGCCGTGTaGCAAAATATTCCTCGTTGGATCATGTCAGTGGAAAGAGTATGG +
Preference number: 1 (lower is better)
Translates to: FYQVVQKIIRYIFAV*QNIPRWIMSVERVW
Trigger: CCATACTCTTTCCACTGACATGATCCAACGAGGAATATTTTGCCACACGGCAAATATATACCGTATAATTTTCTGTACCACTTGATAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 90 bp TTTACCTTTCTATCAAGTGGTACAGAAAATTATACGGTATATATTTaGCGTGTGGCAAAATATTCCTCGTTGGATCATGTCAGTGGAAAG +
Preference number: 1 (lower is better)
Translates to: FTFLSSGTENYTVYI*RVAKYSSLDHVSGK
Trigger: CTTTCCACTGACATGATCCAACGAGGAATATTTTGCCACACGGCAAATATATACCGTATAATTTTCTGTACCACTTGATAGAAAGGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 90 bp AAAATTATACGGTATATATTTGCCGTGTGGCAAAATATTCCTCGTTaGATCATGTCAGTGGAAAGAGTATGGTTCTTCTTTGTATTAGTC +
Preference number: 1 (lower is better)
Translates to: KIIRYIFAVWQNIPR*IMSVERVWFFFVLV
Trigger: GACTAATACAAAGAAGAACCATACTCTTTCCACTGACATGATCCAACGAGGAATATTTTGCCACACGGCAAATATATACCGTATAATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCGGCAGTGAGCCCCGATaGCCCACCAACTCCACCAGG +
Preference number: 2 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRAGSEPR*PTNSTR
Trigger: CCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGCC...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCCCCCAACAAGCCCAGTaGCCCCCACCACACAGTGGT +
Preference number: 2 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLPQQAQ*PPPHSG
Trigger: ACCACTGTGTGGTGGGGGGCACTGGGCTTGTTGGGG...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGCCCCTTTCTATCAACTaGCCCCGCTCTGCCCGCTCC +
Preference number: 2 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQPLSIN*PRSARS
Trigger: GGAGCGGGCAGAGCGGGGGCAGTTGATAGAAAGGGG...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCCAGGCCGATGCAGCCTaGGGACTGTGGTCCCACCTC +
Preference number: 2 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRAQADAA*GLWSHL
Trigger: GAGGTGGGACCACAGTCCCCAGGCTGCATCGGCCTG...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTGGCTCGTGCCCTGGCTaGAAGAGCCAGGTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPGSCPG*KSQVRE
Trigger: CTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCC...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR CCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACAGAGGCTGGGCAGCACTaGGCCAGAGGCGTCCTGGTC +
Preference number: 2 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTEAGQH*ARGVLV
Trigger: GACCAGGACGCCTCTGGCCCAGTGCTGCCCAGCCTC...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCTGTAAGGGGGTCCTCTaGCACCGCAGGCCCCAAACT +
Preference number: 2 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLCKGVL*HRRPQT
Trigger: AGTTTGGGGCCTGCGGTGCCAGAGGACCCCCTTACA...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACAGGCTCGTGCCCTGGCTaGAAGAGCCAGGTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTGSCPG*KSQVRE
Trigger: CTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCC...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCGTTTCTGAGCCCAGATaGGAGGTTGGAGCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLVSEPR*EVGAAP
Trigger: GGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAAC...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CAA 90 bp CCGGGGGCAGCCGCCACGCACACACGCATGCCACCTGAGCAAGCCTaGATGGGTGAATACCAGGAGACCCCTGAAGGTGCTCCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: PGAAATHTRMPPEQA*MGEYQETPEGAPCF
Trigger: GAAGCAAGGAGCACCTTCAGGGGTCTCCTGGTATTCACCCATCAAGGCTTGCTCAGGTGGCATGCGTGTGTGCGTGGCGGCTGCCCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCTCCCACCTCAGCTCATaGTGTGGCAAGGAGGGGCCC +
Preference number: 2 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVSHLSS*CGKEGP
Trigger: GGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGA...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR TCA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCAATCAGCTGTGTACCCTaGGGCTCCCCGGCACGTCAT +
Preference number: 2 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPISCVP*GSPARH
Trigger: ATGACGTGCCGGGGAGCCTCAGGGTACACAGCTGAT...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCCACTCTCACTGGGGTTaGGTTTGGGAGTCCAAGCGC +
Preference number: 2 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRAHSHWG*VWESKR
Trigger: GCGCTTGGACTCCCAAACGCAACCCCAGTGAGAGTG...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCTCAATAAGCACTGCCTaGGCCAGCAGAGGGCACCGG +
Preference number: 2 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSSISTA*ASRGHR
Trigger: CCGGTGCCCTCTGCTGGCCCAGGCAGTGCTTATTGA...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCCACTGGGGTTGCGTTTaGGAGTCCAAGCGCCACTGT +
Preference number: 2 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRAHWGCV*ESKRHC
Trigger: ACAGTGGCGCTTGGACTCCCAAACGCAACCCCAGTG...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCAGGAGTGGCAGGAGGTaGTCACAGCTGGAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRARSGRR*SQLEAE
Trigger: TTCTGCCTCCAGCTGTGACCACCTCCTGCCACTCCT...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGAGGTGGGAGAACAGATaGAGGCTGAAGGACCTCTGG +
Preference number: 2 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQRWENR*RLKDLW
Trigger: CCAGAGGTCCTTCAGCCTCCATCTGTTCTCCCACCT...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCGGCATAGTCCCTCTCTaGGGTAAGGCAAGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLGIVPL*GKARER
Trigger: CCTCTCTCTTGCCTTACCTCAGAGAGGGACTATGCC...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR TCA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCAGTCCTGGAGACAGAGTaGGCAGGAACCCACAGTGAG +
Preference number: 2 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPVLETE*AGTHSE
Trigger: CTCACTGTGGGTTCCTGCTCACTCTGTCTCCAGGAC...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCAGAACAGATGGAGGCTaGAGGACCTCTGGTGGCAAA +
Preference number: 2 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLRTDGG*RTSGGK
Trigger: TTTGCCACCAGAGGTCCTTCAGCCTCCATCTGTTCT...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCCACTCTCACTGGGGTTaGGTTTGGGAGTCCAAGCGC +
Preference number: 2 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSHSHWG*VWESKR
Trigger: GCGCTTGGACTCCCAAACGCAACCCCAGTGAGAGTG...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCGCTAGCTGCATGACATaGTATGCGCATGGAGCGTGG +
Preference number: 2 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRAASCMT*YAHGAW
Trigger: CCACGCTCCATGCGCATAGCATGTCATGCAGCTAGC...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGTGTGAGGAAGACGTCTaGAAGGATACACCACCCACG +
Preference number: 2 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQCEEDV*KDTPPT
Trigger: CGTGGGTGGTGTATCCTTCCAGACGTCTTCCTCACA...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCCAACAGGGAGGGCACTaGTTTTCAGAAAGGAGGGGT +
Preference number: 2 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRAQQGGH*FSERRG
Trigger: ACCCCTCCTTTCTGAAAATCAGTGCCCTCCCTGTTG...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGCGCCTAGGCTTGCTCTaGGGATCAAGTAAGTTGGTA +
Preference number: 2 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQRLGLL*GSSKLV
Trigger: TACCAACTTACTTGATCCTCAGAGCAAGCCTAGGCG...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGCAAGAGAGCGAACGTTaGCAAACTCTCTGCACATGC +
Preference number: 2 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQQESER*QTLCTC
Trigger: GCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTG...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCCCTCAGCTCATGATGTaGCAAGGAGGGGCCCAGGAA +
Preference number: 2 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVPQLMM*QGGAQE
Trigger: TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGG...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR CCA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCCAGGGAGAAGGGGTCTaGTCAAGAGAGCGAACGTTG +
Preference number: 2 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSQGEGV*SRERTL
Trigger: CAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTG...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCCAAACTCTCTGCACATaGTCCAGGAGAAAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRAQTLCT*SRRKLR
Trigger: CCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTG...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp TTTCCATCTGGCATTTCCACTTGCTTTGGTATCCACAGGCGCTTCCGGGCCCGGGCGATCTCAGGTCACTaGAACCACCCCGTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: FPSGISTCFGIHRRFRARAISGH*NHPVPG
Trigger: ACCCGGGACGGGGTGGTTGCAGTGACCTGAGATCGC...CCGGGCCCGGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGATGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGTTCTGCCAAGAAAGTTaGCTAGCCCAGGGTTTTTGG +
Preference number: 2 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQFCQES*LAQGFW
Trigger: CCAAAAACCCTGGGCTAGGCAACTTTCTTGGCAGAA...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTGGAGGGCTCGTGCCCTaGCTGGAAGAGCCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPGGLVP*LEEPGQ
Trigger: CTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCC...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGCTGGCCCCCATCCCCTaGGCTGTCCCTGGCTCTTCC +
Preference number: 2 (lower is better)
Translates to: RFTLPTICESEIQAALGWLAPIP*AVPGSS
Trigger: GGAAGAGCCAGGGACAGCCCAGGGGATGGGGGCCAG...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp TTTCCATCTGGCATTTCCACTTGCTTTGGTATCCACAGGCGCTTCCGGGCCCGGCCTGCTGCGGCCTCCTaGCTCTACAGGACGATCAGC +
Preference number: 2 (lower is better)
Translates to: FPSGISTCFGIHRRFRARPAAAS*LYRTIS
Trigger: GCTGATCGTCCTGTAGAGCCAGGAGGCCGCAGCAGG...CCGGGCCCGGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGATGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTCATCGGCCACCAGGCTaGTCTCCAGGAAATAGGGCC +
Preference number: 2 (lower is better)
Translates to: IDLSFPSGAGIQASCSATHRPPG*SPGNRA
Trigger: GGCCCTATTTCCTGGAGACCAGCCTGGTGGCCGATG...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CAA 90 bp ATCCCACCAGTGACCCAGGTAAGAGGATTGCAAAGGCCAAGAGGCTaGAGGAGGGAAGGCTGCCCGGAAGGCAGTCTGTCCTGGAGACAG +
Preference number: 2 (lower is better)
Translates to: IPPVTQVRGLQRPRG*RREGCPEGSLSWRQ
Trigger: CTGTCTCCAGGACAGACTGCCTTCCGGGCAGCCTTCCCTCCTCAAGCCTCTTGGCCTTTGCAATCCTCTTACCTGGGTCACTGGTGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTTCCCACCTCAGCTCATaGTGTGGCAAGGAGGGGCCC +
Preference number: 2 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPSHLSS*CGKEGP
Trigger: GGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGA...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGCAGCTGGGCATGGGCTaGGGAGAGGTCTTGCTTGCC +
Preference number: 2 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQQLGMG*GEVLLA
Trigger: GGCAAGCAAGACCTCTCCTCAGCCCATGCCCAGCTG...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCCCTCGGTGAAGAGTaGGGCCTGATCGCCGCTCAC +
Preference number: 2 (lower is better)
Translates to: RFTLPTICESEIQAALGWALGEE*GLIAAH
Trigger: GTGAGCGGCGATCAGGCCTCACTCTTCACCGAGGGC...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCCCCAACAAGCCCAGTaGCCCCCACCACACAGTGGT +
Preference number: 2 (lower is better)
Translates to: KSQVREKGSGQESERCQTPQQAQ*PPPHSG
Trigger: ACCACTGTGTGGTGGGGGGCACTGGGCTTGTTGGGG...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR GCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCTATAAACTGCTAGGCTaGAAGGAGAGAAGGGCTAAG +
Preference number: 2 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLYKLLG*KERRAK
Trigger: CTTAGCCCTTCTCTCCTTGCAGCCTAGCAGTTTATA...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCAGGAGAGGTCTTGCTTaGCCCCTTCAACTTTCCATC +
Preference number: 2 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSRRGLA*PLQLSI
Trigger: GATGGAAAGTTGAAGGGGGCAAGCAAGACCTCTCCT...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTGGAGGGCTCGTGCCCTaGCTGGAAGAGCCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIGGLVP*LEEPGQ
Trigger: CTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCC...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR CCA 90 bp CGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGCACTGGGGTTGCGTTTaGGAGTCCAAGCGCCACTGT +
Preference number: 2 (lower is better)
Translates to: RKGHNAAIAGPIPRLKSRHWGCV*ESKRHC
Trigger: ACAGTGGCGCTTGGACTCCCAAACGCAACCCCAGTG...CCGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGTCCCACCTCAGCTCATaGTGTGGCAAGGAGGGGCCC +
Preference number: 2 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWSHLSS*CGKEGP
Trigger: GGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGA...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR TCA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGATCAGCTGTGTACCCTaGGGCTCCCCGGCACGTCAT +
Preference number: 2 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQISCVP*GSPARH
Trigger: ATGACGTGCCGGGGAGCCTCAGGGTACACAGCTGAT...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTGAACTCCTGACTTCGTaGTCCGTCCGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPELLTS*SVRLSL
Trigger: GAGGCTGAGGCGGACGGATCACGAAGTCAGGAGTTC...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp TTTCCATCTGGCATTTCCACTTGCTTTGGTATCCACAGGCGCTTCCGGGCCCGGCCTCCCGGGTTCAAGTaGTTCTCCAGCCTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: FPSGISTCFGIHRRFRARPPGFK*FSSLSF
Trigger: GAAGCTGAGGCTGGAGAATCACTTGAACCCGGGAGG...CCGGGCCCGGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGATGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCCAACTGAATCCATTCTaGCACACTGTCTTACAGTTC +
Preference number: 2 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLQLNPF*HTVLQF
Trigger: GAACTGTAAGACAGTGTGTCAGAATGGATTCAGTTG...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCCACACAGTGGTTTCCTaGTTAATACCCCGCAACATA +
Preference number: 2 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLHTVVS*LIPRNI
Trigger: TATGTTGCGGGGTATTAAGCAGGAAACCACTGTGTG...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR GCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCCCCCAACAAGCCCAGTaGCCCCCACCACACAGTGGT +
Preference number: 2 (lower is better)
Translates to: GKKGQADRILSSTKPAGAPQQAQ*PPPHSG
Trigger: ACCACTGTGTGGTGGGGGGCACTGGGCTTGTTGGGG...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR GCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGATGGGAGGTTGGAGCTaGTCCCAAGGCCACGGCCCT +
Preference number: 2 (lower is better)
Translates to: RFTLPTICESEIQAALGWMGGWS*SQGHGP
Trigger: AGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCAT...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGGGAGGGCTCGTGCCCTaGCTGGAAGAGCCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWGGLVP*LEEPGQ
Trigger: CTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCC...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR CCA 90 bp TTTCCATCTGGCATTTCCACTTGCTTTGGTATCCACAGGCGCTTCCGGGCCCGGCCTGATCAGAGGACCTaGTTCTTCCCCAGACCAGGC +
Preference number: 2 (lower is better)
Translates to: FPSGISTCFGIHRRFRARPDQRT*FFPRPG
Trigger: GCCTGGTCTGGGGAAGAACCAGGTCCTCTGATCAGG...CCGGGCCCGGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGATGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTAACAGGCACTCTCACTaGGGTTGCGTTTGGGAGTCC +
Preference number: 2 (lower is better)
Translates to: IDLSFPSGAGIQASCSATNRHSH*GCVWES
Trigger: GGACTCCCAAACGCAACCCCAGTGAGAGTGCCTGTT...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCACAGGCTGGAGTGCAGTaGTATGATCTTGGATTACTG +
Preference number: 2 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPQAGVQ*YDLGLL
Trigger: CAGTAATCCAAGATCATACCACTGCACTCCAGCCTG...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CAA 90 bp GAAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTaGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTG +
Preference number: 2 (lower is better)
Translates to: EEPGQGEGVWSRERT*PNSLHMLQEKAQDV
Trigger: CACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR TCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTTCCCACCTCAGCTCATaGTGTGGCAAGGAGGGGCCC +
Preference number: 2 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPSHLSS*CGKEGP
Trigger: GGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGA...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR TCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCCAGCTGGGCATGGGCTaGGGAGAGGTCTTGCTTGCC +
Preference number: 2 (lower is better)
Translates to: KKGQADRILSSTKPAGASQLGMG*GEVLLA
Trigger: GGCAAGCAAGACCTCTCCTCAGCCCATGCCCAGCTG...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR GCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTAGCTCCCCATCACCCTaGCCTCTCCAAATCCTCGTC +
Preference number: 2 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPSSPSP*PLQILV
Trigger: GACGAGGATTTGGAGAGGGCAGGGTGATGGGGAGCT...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTCTCCACCTTGTGGCCTaGACTTCCTTTCCCACCTGG +
Preference number: 2 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPLHLVA*TSFPTW
Trigger: CCAGGTGGGAAAGGAAGTCCAGGCCACAAGGTGGAG...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp TTTCCATCTGGCATTTCCACTTGCTTTGGTATCCACAGGCGCTTCCGGGCCCGGCCTCAACCATCTGTGTaGCCTTGGGCAACTTCACCT +
Preference number: 2 (lower is better)
Translates to: FPSGISTCFGIHRRFRARPQPSV*PWATSP
Trigger: AGGTGAAGTTGCCCAAGGTCACACAGATGGTTGAGG...CCGGGCCCGGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGATGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCCAAGGCCTTCCTCCCTaGACCTCTCTCCTGACAGCT +
Preference number: 2 (lower is better)
Translates to: GKKGQADRILSSTKPAGAQGLPP*TSLLTA
Trigger: AGCTGTCAGGAGAGAGGTGCAGGGAGGAAGGCCTTG...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR GCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACACTCCAAAGTAGTTTCTaGCAAGAAAGTTGCCTAGCC +
Preference number: 2 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTLQSSF*QESCLA
Trigger: GGCTAGGCAACTTTCTTGGCAGAAACTACTTTGGAG...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGCCTCAGCTCATGATGTaGCAAGGAGGGGCCCAGGAA +
Preference number: 2 (lower is better)
Translates to: RFTLPTICESEIQAALGWPQLMM*QGGAQE
Trigger: TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGG...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGCCTCAGCTCATGATGTaGCAAGGAGGGGCCCAGGAA +
Preference number: 2 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWPQLMM*QGGAQE
Trigger: TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGG...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR CCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGGACGTGGACATTTCTaGCCCCAACAAGCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: RFTLPTICESEIQAALGWGRGHF*PQQAQC
Trigger: GCACTGGGCTTGTTGGGGCCAGAAATGTCCACGTCC...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGGAGGCTGGGCAGCACTaGGCCAGAGGCGTCCTGGTC +
Preference number: 2 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLEAGQH*ARGVLV
Trigger: GACCAGGACGCCTCTGGCCCAGTGCTGCCCAGCCTC...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGCGGCCAAACTCCTCCTaGCTCCACCGGAAAGGGCAC +
Preference number: 2 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQRPNSS*LHRKGH
Trigger: GTGCCCTTTCCGGTGGAGCCAGGAGGAGTTTGGCCG...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTAGGTGGGAGAACAGATaGAGGCTGAAGGACCTCTGG +
Preference number: 2 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPRWENR*RLKDLW
Trigger: CCAGAGGTCCTTCAGCCTCCATCTGTTCTCCCACCT...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGACTCAGGGACCACCCTaGTCAGAGGACCTGGTTCTT +
Preference number: 2 (lower is better)
Translates to: RFTLPTICESEIQAALGWTQGPP*SEDLVL
Trigger: AAGAACCAGGTCCTCTGATCAGGGTGGTCCCTGAGT...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACGCACTCAATAAGCACTaGCTGGGCCAGCAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHALNKH*LGQQRA
Trigger: TGCCCTCTGCTGGCCCAGGCAGTGCTTATTGAGTGC...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACAATGTTGCACGTGATATaGAGAGGTAACAGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTMLHVI*RGNSLS
Trigger: AGACAGACTGTTACCTCTGCATATCACGTGCAACAT...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTTTCTGCCAAGAAAGTTaGCTAGCCCAGGGTTTTTGG +
Preference number: 2 (lower is better)
Translates to: IDLSFPSGAGIQASCSATFCQES*LAQGFW
Trigger: CCAAAAACCCTGGGCTAGGCAACTTTCTTGGCAGAA...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTTCACCTCTGTGTGCCTaGTTCCTCACTGGTAAAACA +
Preference number: 2 (lower is better)
Translates to: IDLSFPSGAGIQASCSATSPLCA*FLTGKT
Trigger: TGTTTTACCAGTGAGGAAGCAGGCACACAGAGGTGA...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGAAACTCCCTGTGAATTaGCAGGGGCCAGAATGTGGG +
Preference number: 2 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQKLPVN*QGPECG
Trigger: CCCACATTCTGGCCCCTGGCAATTCACAGGGAGTTT...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTGGACGTGGACATTTCTaGCCCCAACAAGCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPGRGHF*PQQAQC
Trigger: GCACTGGGCTTGTTGGGGCCAGAAATGTCCACGTCC...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR CCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGGGAGGGCTCGTGCCCTaGCTGGAAGAGCCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRGGLVP*LEEPGQ
Trigger: CTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCC...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR CCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCTGGTTAGTATCATTTTaGCCACAAATATGTCCCCTT +
Preference number: 2 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLWLVSF*PQICPL
Trigger: AAGGGGACATATTTGTGGCCAAAATGATACTAACCA...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR CCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGTATGCGCATGGAGCGTaGCGGCCAAACTCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQYAHGA*RPNSSW
Trigger: CCAGGAGGAGTTTGGCCGCCACGCTCCATGCGCATA...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGAGTGCAGCTGGGGAATaGCCTGGAAGAGGCCGTAAA +
Preference number: 2 (lower is better)
Translates to: RFTLPTICESEIQAALGWSAAGE*PGRGRK
Trigger: TTTACGGCCTCTTCCAGGCCATTCCCCAGCTGCACT...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTAGGCTGAAGGACCTCTaGTGGCAAAACACTGACCTC +
Preference number: 2 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPRLKDL*WQNTDL
Trigger: GAGGTCAGTGTTTTGCCACCAGAGGTCCTTCAGCCT...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTCAGAATGTGGGTAGGTaGGAGAACAGATGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPQNVGR*ENRWRL
Trigger: CAGCCTCCATCTGTTCTCCCACCTACCCACATTCTG...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGCCAGGGGCCAGAATGTaGGTAGGTGGGAGAACAGAT +
Preference number: 2 (lower is better)
Translates to: RFTLPTICESEIQAALGWPGARM*VGGRTD
Trigger: ATCTGTTCTCCCACCTACCCACATTCTGGCCCCTGG...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACCCAGCCTCAGCTTCCTaGGTAGCTGGGATTACAGGT +
Preference number: 2 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHPASAS*VAGITG
Trigger: ACCTGTAATCCCAGCTACTCAGGAAGCTGAGGCTGG...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGTTGTTCCATAAAGAATaGGGCTTGCCCTCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQLFHKE*GLPSLP
Trigger: GGGAAGGGAGGGCAAGCCTCATTCTTTATGGAACAA...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp CGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGTCCCTCCCACTCATCTaGTTTCTTTCCTCAACTTTG +
Preference number: 2 (lower is better)
Translates to: RKGHNAAIAGPIPRLKSRSLPLI*FLSSTL
Trigger: CAAAGTTGAGGAAAGAAAGCAGATGAGTGGGAGGGA...CCGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGTCGCCCAGGCTGGAGTaGAGTGGTATGATCTTGGAT +
Preference number: 2 (lower is better)
Translates to: RFTLPTICESEIQAALGWSPRLE*SGMILD
Trigger: ATCCAAGATCATACCACTGCACTCCAGCCTGGGCGA...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTTCTGGCATTTCCACTTaGTTTGGTATCCACAGGCGC +
Preference number: 2 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPSGIST*FGIHRR
Trigger: GCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGA...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTCAGGGAGAAGGGGTCTaGTCAAGAGAGCGAACGTTG +
Preference number: 2 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPQGEGV*SRERTL
Trigger: CAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTG...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR CCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGCTCCACCTTGTGGCCTaGACTTCCTTTCCCACCTGG +
Preference number: 2 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQLHLVA*TSFPTW
Trigger: CCAGGTGGGAAAGGAAGTCCAGGCCACAAGGTGGAG...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTCGGGGCTTTTCCATCTaGCATTTCCACTTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPRGFSI*HFHLLW
Trigger: CCAAAGCAAGTGGAAATGCCAGATGGAAAAGCCCCG...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGAGGCTGAAGGACCTCTaGTGGCAAAACACTGACCTC +
Preference number: 2 (lower is better)
Translates to: RFTLPTICESEIQAALGWRLKDL*WQNTDL
Trigger: GAGGTCAGTGTTTTGCCACCAGAGGTCCTTCAGCCT...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGATACCAGGAGACCCCTaGAGGTGCTCCTTGCTTCAG +
Preference number: 2 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQIPGDP*RCSLLQ
Trigger: CTGAAGCAAGGAGCACCTTCAGGGGTCTCCTGGTAT...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGTTCCTAAACTCCCTGTaGATTGCCAGGGGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: RFTLPTICESEIQAALGWFLNSL*IARGQN
Trigger: ATTCTGGCCCCTGGCAATTCACAGGGAGTTTAGGAA...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGCAAACTCTCTGCACATaGTCCAGGAGAAAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: RFTLPTICESEIQAALGWQTLCT*SRRKLR
Trigger: CCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTG...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCCGTTGCCAAACTCTCTaGACATGCTCCAGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: GKKGQADRILSSTKPAGARCQTL*TCSRRK
Trigger: CTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACG...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR GCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCGCTGAGGAGAGGTCTTaGTTGCCCCCTTCAACTTTC +
Preference number: 2 (lower is better)
Translates to: KKGQADRILSSTKPAGASAEERS*LPPSTF
Trigger: GAAAGTTGAAGGGGGCAAGCAAGACCTCTCCTCAGC...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR CCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGCAGGGAGAAGGGGTCTaGTCAAGAGAGCGAACGTTG +
Preference number: 2 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQQGEGV*SRERTL
Trigger: CAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTG...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGATCCCGCCATCTCTCCTaGACCTCCCCGAGCCACGCA +
Preference number: 2 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRSRHLS*TSPSHA
Trigger: TGCGTGGCTCGGGGAGGTCCAGGAGAGATGGCGGGA...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCCAAACTCTCTGCACATaGTCCAGGAGAAAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: KKGQADRILSSTKPAGASQTLCT*SRRKLR
Trigger: CCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTG...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR TCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGCGCCTAGGCTTGCTCTaGGGATCAAGTAAGTTGGTA +
Preference number: 2 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQRLGLL*GSSKLV
Trigger: TACCAACTTACTTGATCCTCAGAGCAAGCCTAGGCG...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCCCTCAGCTCATGATGTaGCAAGGAGGGGCCCAGGAA +
Preference number: 2 (lower is better)
Translates to: GKIKKINAPKRETQAGRCPQLMM*QGGAQE
Trigger: TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGG...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
3UTR-3UTR CCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAGAGACCGCCGGTGCCTaGCCTGAGAATCCAAGTGCA +
Preference number: 2 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRETAGA*PENPSA
Trigger: TGCACTTGGATTCTCAGGCCAGGCACCGGCGGTCTC...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGGACATTTGTCTCCACTaGGGGCGACTTGATCCACAA +
Preference number: 2 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQDICLH*GRLDPQ
Trigger: TTGTGGATCAAGTCGCCCCCAGTGGAGACAAATGTC...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CAA 90 bp AGCTCTGTAAACCTGCAAACTCGAGGCTGGCTGAACTCTACAGCATaGACTAACACGGGGCTTTTCCATCTGGCATTTCCACTTGCTTTG +
Preference number: 2 (lower is better)
Translates to: SSVNLQTRGWLNSTA*TNTGLFHLAFPLAL
Trigger: CAAAGCAAGTGGAAATGCCAGATGGAAAAGCCCCGTGTTAGTCAATGCTGTAGAGTTCAGCCAGCCTCGAGTTTGCAGGTTTACAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAAACTCCACCAGGCCCTaGCAAGGAAGCCCCTTTGGT +
Preference number: 2 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRNSTRP*QGSPFG
Trigger: ACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTT...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGTCTCATCAGAAAGCCTaGAATCCCACGTTAGATATT +
Preference number: 2 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQSHQKA*NPTLDI
Trigger: AATATCTAACGTGGGATTTCAGGCTTTCTGATGAGA...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCCACACAGTGGTTTCCTaGTTAATACCCCGCAACATA +
Preference number: 2 (lower is better)
Translates to: KKGQADRILSSTKPAGASHTVVS*LIPRNI
Trigger: TATGTTGCGGGGTATTAAGCAGGAAACCACTGTGTG...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR GCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAAAGTCCTCTCCATCCTaGCATGGCGTCCTGGCCTGT +
Preference number: 2 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRKSSPS*HGVLAC
Trigger: ACAGGCCAGGACGCCATGGCAGGATGGAGAGGACTT...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAAGCTCCCCATCACCCTaGCCTCTCCAAATCCTCGTC +
Preference number: 2 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRSSPSP*PLQILV
Trigger: GACGAGGATTTGGAGAGGGCAGGGTGATGGGGAGCT...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAGGCAGGAAGAACAGCTaGACCCGAGTCAGACACGCA +
Preference number: 2 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRGRKNS*TRVRHA
Trigger: TGCGTGTCTGACTCGGGTCCAGCTGTTCTTCCTGCC...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGATCTGACACTGGTTTCTaGGCCCAGATGGGAGGTTGG +
Preference number: 2 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRSDTGF*AQMGGW
Trigger: CCAACCTCCCATCTGGGCTCAGAAACCAGTGTCAGA...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGCGTTGCCAAACTCTCTaGACATGCTCCAGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLRCQTL*TCSRRK
Trigger: CTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACG...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAGCTGGAGTGCAGTGGTaGGATCTCAGGTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRAGVQW*DLRSLQ
Trigger: TTGCAGTGACCTGAGATCGCACCACTGCACTCCAGC...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAGGTTGTGTTAGATGCTaGCCAGGGATGTCCTCACGG +
Preference number: 2 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRGCVRC*PGMSSR
Trigger: CCGTGAGGACATCCCTGGCCAGCATCTAACACAACC...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR GCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAATGCACTTGGCTAGCTaGATGACATGCTATGCGCAT +
Preference number: 2 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRMHLAS*MTCYAH
Trigger: ATGCGCATAGCATGTCATGCAGCTAGCCAAGTGCAT...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR TCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGATTTCAAACCCACTCATaGAATCAAGTTCGTGAGTCA +
Preference number: 2 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRFQTHS*NQVRES
Trigger: TGACTCACGAACTTGATTTCATGAGTGGGTTTGAAA...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAACTGTCTTACAGTTCTaGTATAAAGGGTCAGACTTC +
Preference number: 2 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRTVLQF*YKGSDF
Trigger: GAAGTCTGACCCTTTATACCAGAACTGTAAGACAGT...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CAA 90 bp AGTCGCCCATACAATCACTCCCTTCTTAGTAACAGGAATCTTAATTaGATTCAGCTTCAGAAATACTTTTTCCAGCCTCTTTTGCTGACA +
Preference number: 2 (lower is better)
Translates to: SRPYNHSLLSNRNLN*IQLQKYFFQPLLLT
Trigger: TGTCAGCAAAAGAGGCTGGAAAAAGTATTTCTGAAGCTGAATCAAATTAAGATTCCTGTTACTAAGAAGGGAGTGATTGTATGGGCGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CAA 90 bp CTTTACCTTTCTATCAAGTGGTACAGAAAATTATACGGTATATATTaGCCGTGTGGCAAAATATTCCTCGTTGGATCATGTCAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: LYLSIKWYRKLYGIY*PCGKIFLVGSCQWK
Trigger: TTTCCACTGACATGATCCAACGAGGAATATTTTGCCACACGGCAAATATATACCGTATAATTTTCTGTACCACTTGATAGAAAGGTAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 72 bp CTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTaGACCATCGACCTCTCATTTCCGTCCGGCGCTGGG +
Preference number: 3 (lower is better)
Translates to: LGPDGGGTPTPA*TIDLSFPSGAG
Trigger: CCCAGCGCCGGACGGAAATGAGAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 72 bp GTTAGATGCTGGCCAGGGATGTCCTCACGGCCCCTGTaGGTGACGGTGGCCATGGGTGACGGTGGCCGTGGG +
Preference number: 3 (lower is better)
Translates to: VRCWPGMSSRPL*VTVAMGDGGRG
Trigger: CCCACGGCCACCGTCACCCATGGCCACCGTCACCCACAGGGGCCGTGAGGACATCCCTGGCCAGCATCTAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 72 bp CCCAGAGCAGGGCCGGCCCAGGCCCACCGCACTCTATaGCATCGGCCACCAGGCTGGTCTCCAGGAAATAGG +
Preference number: 3 (lower is better)
Translates to: PRAGPAQAHRTL*HRPPGWSPGNR
Trigger: CCTATTTCCTGGAGACCAGCCTGGTGGCCGATGTCATAGAGTGCGGTGGGCCTGGGCCGGCCCTGCTCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGGGGAAAGTAACAGCCTaGGCACTACCCGGCCCCCTT +
Preference number: 3 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQGKVTA*ALPGPL
Trigger: AAGGGGGCCGGGTAGTGCCAAGGCTGTTACTTTCCC...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 72 bp GCAGGCCCCTCCTCAGGGAAGGCCCTCGGTGAAGAGTaGGGCCTGATCGCCGCTCACCTACTCCTGATCCTG +
Preference number: 3 (lower is better)
Translates to: AGPSSGKALGEE*GLIAAHLLLIL
Trigger: CAGGATCAGGAGTAGGTGAGCGGCGATCAGGCCTCACTCTTCACCGAGGGCCTTCCCTGAGGAGGGGCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 72 bp GGCTGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTaGTCCACCTGGTCACTGCTCCACCTCATGCTGAGA +
Preference number: 3 (lower is better)
Translates to: GWAALGQRRPGH*STWSLLHLMLR
Trigger: TCTCAGCATGAGGTGGAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR TCA 72 bp GGGCACCGGGCACAAAGCACCACTCAGGGACCACCCTaGTCAGAGGACCTGGTTCTTCCCCAGACCAGGCCT +
Preference number: 3 (lower is better)
Translates to: GHRAQSTTQGPP*SEDLVLPQTRP
Trigger: AGGCCTGGTCTGGGGAAGAACCAGGTCCTCTGATCAGGGTGGTCCCTGAGTGGTGCTTTGTGCCCGGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 72 bp GCAGGAGGTGGTCACAGCTGGAGGCAGAAGCAGGAATaGAGCAGCAGCAGCAGCCAGGCGCAAGGCAGCTCT +
Preference number: 3 (lower is better)
Translates to: AGGGHSWRQKQE*SSSSSQAQGSS
Trigger: AGAGCTGCCTTGCGCCTGGCTGCTGCTGCTGCTGCATTCCTGCTTCTGCCTCCAGCTGTGACCACCTCCTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 72 bp CGCCTCACAGGAAGAGGCTCTGGCAGGAAGAACAGCTaGACCCGAGTCAGACACGCAGGTCACGGGCCCAGA +
Preference number: 3 (lower is better)
Translates to: RLTGRGSGRKNS*TRVRHAGHGPR
Trigger: TCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTCCTGCCAGAGCCTCTTCCTGTGAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCGAGGAGAGGTCTTGCTaGCCCCCTTCAACTTTCCAT +
Preference number: 3 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLEERSC*PPSTFH
Trigger: ATGGAAAGTTGAAGGGGGCAAGCAAGACCTCTCCTC...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGGCATTTCCACTTGCTTaGGTATCCACAGGCGCTTCC +
Preference number: 3 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQAFPLA*VSTGAS
Trigger: GGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGC...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 72 bp AGAGTGAGACTGAGACCTGAGAAGGAGCCTGGGCCCTaGCGGTGGAGGAACCCCCACACCAGCCTGCACCAT +
Preference number: 3 (lower is better)
Translates to: RVRLRPEKEPGP*RWRNPHTSLHH
Trigger: ATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCTCCTTCTCAGGTCTCAGTCTCACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 72 bp TGCTATGCGCATGGAGCGTGGCGGCCAAACTCCTCCTaGCTCCACCGGAAAGGGCACAATGCAGCTATCGCC +
Preference number: 3 (lower is better)
Translates to: CYAHGAWRPNSS*LHRKGHNAAIA
Trigger: GGCGATAGCTGCATTGTGCCCTTTCCGGTGGAGCCAGGAGGAGTTTGGCCGCCACGCTCCATGCGCATAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCGCATTTCCACTTGCTTaGGTATCCACAGGCGCTTCC +
Preference number: 3 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRAAFPLA*VSTGAS
Trigger: GGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGC...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCAGACTCCATCAGACATTaGTCTCCACTGGGGGCGACT +
Preference number: 3 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPDSIRH*SPLGAT
Trigger: AGTCGCCCCCAGTGGAGACAAATGTCTGATGGAGTC...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 72 bp ACCTCCTGCAGGGAAGGCAGCCAGACCACATTCCAGTaGGTGGAACGTGAGGGAAGGCTGTCTGCCCACTGC +
Preference number: 3 (lower is better)
Translates to: TSCREGSQTTFQ*VEREGRLSAHC
Trigger: GCAGTGGGCAGACAGCCTTCCCTCACGTTCCACTCACTGGAATGTGGTCTGGCTGCCTTCCCTGCAGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 72 bp TTGGCTAGCTGCATGACATGCTATGCGCATGGAGCGTaGCGGCCAAACTCCTCCTGGCTCCACCGGAAAGGG +
Preference number: 3 (lower is better)
Translates to: LASCMTCYAHGA*RPNSSWLHRKG
Trigger: CCCTTTCCGGTGGAGCCAGGAGGAGTTTGGCCGCCACGCTCCATGCGCATAGCATGTCATGCAGCTAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCTCAAGAGAGCGAACGTaGCCAAACTCTCTGCACATG +
Preference number: 3 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLSRERT*PNSLHM
Trigger: CATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGA...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR CAA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCGACAAGGAAGCCCCTTaGGTTAGTATCATTTTGGCC +
Preference number: 3 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLDKEAP*VSIILA
Trigger: GGCCAAAATGATACTAACCAAAGGGGCTTCCTTGTC...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp CGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGTCACTGGGGTTGCGTTaGGGAGTCCAAGCGCCACTG +
Preference number: 3 (lower is better)
Translates to: RKGHNAAIAGPIPRLKSRSLGLR*GVQAPL
Trigger: CAGTGGCGCTTGGACTCCCAAACGCAACCCCAGTGA...CCGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTGCACTCTCACTGGGGTaGCGTTTGGGAGTCCAAGCG +
Preference number: 3 (lower is better)
Translates to: IDLSFPSGAGIQASCSATALSLG*RLGVQA
Trigger: CGCTTGGACTCCCAAACGCAACCCCAGTGAGAGTGC...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp TTTCCATCTGGCATTTCCACTTGCTTTGGTATCCACAGGCGCTTCCGGGCCCGGAGCCCAGATGGGAGGTaGGAGCTGCTCCCAAGGCCA +
Preference number: 3 (lower is better)
Translates to: FPSGISTCFGIHRRFRARSPDGR*ELLPRP
Trigger: TGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCT...CCGGGCCCGGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGATGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTCCTGGCCCCTCAGCCTaGGCAGGCTTCTCATGCAGG +
Preference number: 3 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPPGPSA*AGFSCR
Trigger: CCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGG...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 72 bp TCACTGGGGTTGCGTTTGGGAGTCCAAGCGCCACTGTaGGGCCAACCCTGGTATCAGCTGTGTACCCTGAGG +
Preference number: 3 (lower is better)
Translates to: SLGLRLGVQAPL*GQPWYQLCTLR
Trigger: CCTCAGGGTACACAGCTGATACCAGGGTTGGCCTCACAGTGGCGCTTGGACTCCCAAACGCAACCCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 72 bp GCCAAACTCCTCCTGGCTCCACCGGAAAGGGCACAATaGAGCTATCGCCGGGCCGATTCCACGTCTGAAATC +
Preference number: 3 (lower is better)
Translates to: AKLLLAPPERAQ*SYRRADSTSEI
Trigger: GATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGGTGGAGCCAGGAGGAGTTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 72 bp CCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCTaGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCAC +
Preference number: 3 (lower is better)
Translates to: PWLEEPGQGEGV*SRERTLPNSLH
Trigger: GTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR CCA 72 bp AAGGTTGTGTTACCCCCGCCTCACAGGAAGAGGCTCTaGCAGGAAGAACAGCTGGACCCGAGTCAGACACGC +
Preference number: 3 (lower is better)
Translates to: KVVLPPPHRKRL*QEEQLDPSQTR
Trigger: GCGTGTCTGACTCGGGTCCAGCTGTTCTTCCTGCCAGAGCCTCTTCCTGTGAGGCGGGGGTAACACAACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 72 bp TCCAGCAAGGGGCTCAGGGTAGTCAGATGTCTTCCATaGACTCCCTGGAGCTCAAGGCCCCAAGTGTGCCTG +
Preference number: 3 (lower is better)
Translates to: SSKGLRVVRCLP*TPWSSRPQVCL
Trigger: CAGGCACACTTGGGGCCTTGAGCTCCAGGGAGTTCATGGAAGACATCTGACTACCCTGAGCCCCTTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 72 bp AGGCCACGGCCCTCGACACAGCTCCCCAGACAACTCTaGCACCATCTGGTGTCGAGCTCCAAAGTAGTTTCT +
Preference number: 3 (lower is better)
Translates to: RPRPSTQLPRQL*HHLVSSSKVVS
Trigger: AGAAACTACTTTGGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCGTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 72 bp CCTGCAGGGAAGGCAGCCAGACCACATTCCAGTGAGTaGAACGTGAGGGAAGGCTGTCTGCCCACTGCTTTT +
Preference number: 3 (lower is better)
Translates to: PAGKAARPHSSE*NVREGCLPTAF
Trigger: AAAAGCAGTGGGCAGACAGCCTTCCCTCACGTTCCACTCACTGGAATGTGGTCTGGCTGCCTTCCCTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp CGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGTTAGGTTTCACCATGTaGGCCAGGATGGTCCCGAAC +
Preference number: 3 (lower is better)
Translates to: RKGHNAAIAGPIPRLKSRLGFTM*ARMVPN
Trigger: GTTCGGGACCATCCTGGCCAACATGGTGAAACCTAA...CCGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 72 bp AGGAGACCCCTGAAGGTGCTCCTTGCTTCAGGAGCCTaGGAACCCAGTCTTTCGTCTTGTAAGGGGGTCCTC +
Preference number: 3 (lower is better)
Translates to: RRPLKVLLASGA*EPSLSSCKGVL
Trigger: GAGGACCCCCTTACAAGACGAAAGACTGGGTTCTCAGGCTCCTGAAGCAAGGAGCACCTTCAGGGGTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 72 bp TCAGGACGTGGACATTTCTGGCCCCAACAAGCCCAGTaGCCCCCACCACACAGTGGTTTCCTGCTTAATACC +
Preference number: 3 (lower is better)
Translates to: SGRGHFWPQQAQ*PPPHSGFLLNT
Trigger: GGTATTAAGCAGGAAACCACTGTGTGGTGGGGGGCACTGGGCTTGTTGGGGCCAGAAATGTCCACGTCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR GCA 72 bp GCACTCAGAACAATGCACTTGGCTAGCTGCATGACATaGTATGCGCATGGAGCGTGGCGGCCAAACTCCTCC +
Preference number: 3 (lower is better)
Translates to: ALRTMHLASCMT*YAHGAWRPNSS
Trigger: GGAGGAGTTTGGCCGCCACGCTCCATGCGCATAGCATGTCATGCAGCTAGCCAAGTGCATTGTTCTGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 72 bp CATCTTCCTCTTCTTACAGCTGTGCTGAGACGTTTTTaGCTGGGGCAGGGCTGCTGCACTGAGGGTGCATCC +
Preference number: 3 (lower is better)
Translates to: HLPLLTAVLRRF*LGQGCCTEGAS
Trigger: GGATGCACCCTCAGTGCAGCAGCCCTGCCCCAGCCAAAAACGTCTCAGCACAGCTGTAAGAAGAGGAAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTATCTGGCATTTCCACTaGCTTTGGTATCCACAGGCG +
Preference number: 3 (lower is better)
Translates to: IDLSFPSGAGIQASCSATIWHFH*LWYPQA
Trigger: CGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGAT...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 72 bp CTGGAGCACTCAGAACAATGCACTTGGCTAGCTGCATaGCATGCTATGCGCATGGAGCGTGGCGGCCAAACT +
Preference number: 3 (lower is better)
Translates to: LEHSEQCTWLAA*HAMRMERGGQT
Trigger: AGTTTGGCCGCCACGCTCCATGCGCATAGCATGTCATGCAGCTAGCCAAGTGCATTGTTCTGAGTGCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 72 bp TCTAGCAAGAACCAGGAAGAGGCTGTCTCCCTGCCATaGCCTAATCTAGCAGCCACACAGCCCCATTCCGCT +
Preference number: 3 (lower is better)
Translates to: SSKNQEEAVSLP*PNLAATQPHSA
Trigger: AGCGGAATGGGGCTGTGTGGCTGCTAGATTAGGTCATGGCAGGGAGACAGCCTCTTCCTGGTTCTTGCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 72 bp GGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTaGACATGCTCCAGGAGAAAGCTCAGGACGTGGACA +
Preference number: 3 (lower is better)
Translates to: GSGQESERCQTL*TCSRRKLRTWT
Trigger: TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR GCA 72 bp TATCCTGGAGCACTCAGAACAATGCACTTGGCTAGCTaGATGACATGCTATGCGCATGGAGCGTGGCGGCCA +
Preference number: 3 (lower is better)
Translates to: YPGALRTMHLAS*MTCYAHGAWRP
Trigger: TGGCCGCCACGCTCCATGCGCATAGCATGTCATGCAGCTAGCCAAGTGCATTGTTCTGAGTGCTCCAGGATA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 72 bp GGCCTTGGCCAGACTCCATCAGACATTTGTCTCCACTaGGGGCGACTTGATCCACAAATGAGATCCCACCAG +
Preference number: 3 (lower is better)
Translates to: GLGQTPSDICLH*GRLDPQMRSHQ
Trigger: CTGGTGGGATCTCATTTGTGGATCAAGTCGCCCCCAGTGGAGACAAATGTCTGATGGAGTCTGGCCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 72 bp ATCGGCCACCAGGCTGGTCTCCAGGAAATAGGGCCCTaGTGTCTACTTCCTAAACTCCCTGTGAATTGCCAG +
Preference number: 3 (lower is better)
Translates to: IGHQAGLQEIGP*CLLPKLPVNCQ
Trigger: CTGGCAATTCACAGGGAGTTTAGGAAGTAGACACCAGGGCCCTATTTCCTGGAGACCAGCCTGGTGGCCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCTTGGTTAGTATCATTTaGGCCACAAATATGTCCCCT +
Preference number: 3 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSLVSII*ATNMSP
Trigger: AGGGGACATATTTGTGGCCAAAATGATACTAACCAA...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGGAGGAGAGGTCTTGCTaGCCCCCTTCAACTTTCCAT +
Preference number: 3 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQEERSC*PPSTFH
Trigger: ATGGAAAGTTGAAGGGGGCAAGCAAGACCTCTCCTC...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTTTAGGTTTCACCATGTaGGCCAGGATGGTCCCGAAC +
Preference number: 3 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPLGFTM*ARMVPN
Trigger: GTTCGGGACCATCCTGGCCAACATGGTGAAACCTAA...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 72 bp GTTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTaGCCTTGGGCAACTTCACCTCTGTGTGCCTGCTTC +
Preference number: 3 (lower is better)
Translates to: VHSNPALPQPSV*PWATSPLCACF
Trigger: GAAGCAGGCACACAGAGGTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 72 bp CTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTaGTCTGCAACTGAATCCATTCTGACACACTGTCTT +
Preference number: 3 (lower is better)
Translates to: LSFPSGAGIQAS*SATESILTHCL
Trigger: AAGACAGTGTGTCAGAATGGATTCAGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 72 bp GCGCAAGGCAGCTCTGTAAACCTGCAAACTCGAGGCTaGCTGAACTCTACAGCATTGACTAACACGGGGCTT +
Preference number: 3 (lower is better)
Translates to: AQGSSVNLQTRG*LNSTALTNTGL
Trigger: AAGCCCCGTGTTAGTCAATGCTGTAGAGTTCAGCCAGCCTCGAGTTTGCAGGTTTACAGAGCTGCCTTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 72 bp GGTAGGTGGGAGAACAGATGGAGGCTGAAGGACCTCTaGTGGCAAAACACTGACCTCTACAGAGGTCTCATC +
Preference number: 3 (lower is better)
Translates to: GRWENRWRLKDL*WQNTDLYRGLI
Trigger: GATGAGACCTCTGTAGAGGTCAGTGTTTTGCCACCAGAGGTCCTTCAGCCTCCATCTGTTCTCCCACCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp CCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGAAACTCTCAGAATGTaGCACGTGATATGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: PERAQCSYRRADSTSEITETLRM*HVICRG
Trigger: ACCTCTGCATATCACGTGCAACATTCTGAGAGTTTC...CGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 72 bp TTTTCAGAAAGGAGGGGTCAGGGCATAGTCCCTCTCTaGGGTAAGGCAAGAGAGAGGTTGTCCCAGCACAAG +
Preference number: 3 (lower is better)
Translates to: FSERRGQGIVPL*GKARERLSQHK
Trigger: CTTGTGCTGGGACAACCTCTCTCTTGCCTTACCTCAGAGAGGGACTATGCCCTGACCCCTCCTTTCTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR TCA 72 bp GACTCCATCAGACATTTGTCTCCACTGGGGGCGACTTaGTCCACAAATGAGATCCCACCAGTGACCCAGGTA +
Preference number: 3 (lower is better)
Translates to: DSIRHLSPLGAT*STNEIPPVTQV
Trigger: TACCTGGGTCACTGGTGGGATCTCATTTGTGGATCAAGTCGCCCCCAGTGGAGACAAATGTCTGATGGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 72 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATaGTCCAGGAGAAAGCTCAGGACGTGGACATTTCTG +
Preference number: 3 (lower is better)
Translates to: GQESERCQTLCT*SRRKLRTWTFL
Trigger: CAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR GCA 72 bp TCAAACAGTATTTCCAAAGGAGGCTTTTGGCAGGCTTaGCTCATTGCCCTTGCAGGGAAGGCTGCCTGTCTC +
Preference number: 3 (lower is better)
Translates to: SNSISKGGFWQA*LIALAGKAACL
Trigger: GAGACAGGCAGCCTTCCCTGCAAGGGCAATGAGGCAAGCCTGCCAAAAGCCTCCTTTGGAAATACTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGTCAAGAGAGCGAACGTaGCCAAACTCTCTGCACATG +
Preference number: 3 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWSRERT*PNSLHM
Trigger: CATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGA...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR CAA 90 bp TTTCCATCTGGCATTTCCACTTGCTTTGGTATCCACAGGCGCTTCCGGGCCCGGGTCACAAAAAGCGTTTaGTTTTTCCGAGACAGAGTC +
Preference number: 3 (lower is better)
Translates to: FPSGISTCFGIHRRFRARVTKSV*FFRDRV
Trigger: GACTCTGTCTCGGAAAAACAAAACGCTTTTTGTGAC...CCGGGCCCGGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGATGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 72 bp ACATTTGTCTCCACTGGGGGCGACTTGATCCACAAATaGGATCCCACCAGTGACCCAGGTAAGAGGATTGCA +
Preference number: 3 (lower is better)
Translates to: TFVSTGGDLIHK*DPTSDPGKRIA
Trigger: TGCAATCCTCTTACCTGGGTCACTGGTGGGATCTCATTTGTGGATCAAGTCGCCCCCAGTGGAGACAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 72 bp GTAAAGGCTGGAATGGAACAGTCCAGCCTCACACAGTaGCTAACAGCACAGAGTTCATTCCAATCCGGCTCT +
Preference number: 3 (lower is better)
Translates to: VKAGMEQSSLTQ*LTAQSSFQSGS
Trigger: AGAGCCGGATTGGAATGAACTCTGTGCTGTTAGCCACTGTGTGAGGCTGGACTGTTCCATTCCAGCCTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCGACAAGGAAGCCCCTTaGGTTAGTATCATTTTGGCC +
Preference number: 3 (lower is better)
Translates to: KKGQADRILSSTKPAGASDKEAP*VSIILA
Trigger: GGCCAAAATGATACTAACCAAAGGGGCTTCCTTGTC...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR CAA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGAAACTCTCAGAATGTaGCACGTGATATGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: RFTLPTICESEIQAALGWETLRM*HVICRG
Trigger: ACCTCTGCATATCACGTGCAACATTCTGAGAGTTTC...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGACACTGGCATGTGCCCTaGTCAGTCAGCACTTCCGGG +
Preference number: 3 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRHWHVP*SVSTSG
Trigger: CCCGGAAGTGCTGACTGACAAGGGCACATGCCAGTG...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 72 bp AGCTTAAAATACCCGTTTCACATTGCCCACCATTTGTaGGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGT +
Preference number: 3 (lower is better)
Translates to: SLKYPFHIAHHL*VRNSGSPRLGS
Trigger: ACTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACGGGTATTTTAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 72 bp CTGCCACCATCTGGTGTCGAGCTCCAAAGTAGTTTCTaGCAAGAAAGTTGCCTAGCCCAGGGTTTTTGGTTT +
Preference number: 3 (lower is better)
Translates to: LPPSGVELQSSF*QESCLAQGFWF
Trigger: AAACCAAAAACCCTGGGCTAGGCAACTTTCTTGGCAGAAACTACTTTGGAGCTCGACACCAGATGGTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 72 bp AAGGTTAAAATAAAACCAATGTCTGACACTGGTTTCTaGGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGC +
Preference number: 3 (lower is better)
Translates to: KVKIKPMSDTGF*AQMGGWSCSQG
Trigger: GCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAACCAGTGTCAGACATTGGTTTTATTTTAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGGTCACAAAAAGCGTTTaGTTTTTCCGAGACAGAGTC +
Preference number: 3 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQVTKSV*FFRDRV
Trigger: GACTCTGTCTCGGAAAAACAAAACGCTTTTTGTGAC...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTGGGAGAATAATCCTCTaGTTATCATTTGTGCACTTA +
Preference number: 3 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPGRIIL*LSFVHL
Trigger: TAAGTGCACAAATGATAACAAGAGGATTATTCTCCC...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR-3UTR CAA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGATTTCTTTCCTCAACTTaGCTTCCTCCCACCCGTCTA +
Preference number: 3 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRFLSST*LPPTRL
Trigger: TAGACGGGTGGGAGGAAGCAAAGTTGAGGAAAGAAA...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR TCA 72 bp ATTAGTGGAGAACAGAAACTCTCAGAATGTTGCACGTaGTATGCAGAGGTAACAGTCTGTCTGTGTTCTGGG +
Preference number: 3 (lower is better)
Translates to: ISGEQKLSECCT*YAEVTVCLCSG
Trigger: CCCAGAACACAGACAGACTGTTACCTCTGCATATCACGTGCAACATTCTGAGAGTTTCTGTTCTCCACTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 72 bp TGGAGAACAGAAACTCTCAGAATGTTGCACGTGATATaGAGAGGTAACAGTCTGTCTGTGTTCTGGGTATTA +
Preference number: 3 (lower is better)
Translates to: WRTETLRMLHVI*RGNSLSVFWVL
Trigger: TAATACCCAGAACACAGACAGACTGTTACCTCTGCATATCACGTGCAACATTCTGAGAGTTTCTGTTCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 72 bp TCTATGCATATTATGTATAGATGTGAGGAAGACGTCTaGAAGGATACACCACCCACGCGTAAACACACGTTA +
Preference number: 3 (lower is better)
Translates to: SMHIMYRCEEDV*KDTPPTRKHTL
Trigger: TAACGTGTGTTTACGCGTGGGTGGTGTATCCTTCCAGACGTCTTCCTCACATCTATACATAATATGCATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR-3UTR CAA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGGGGAGAATAATCCTCTaGTTATCATTTGTGCACTTA +
Preference number: 3 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLGRIIL*LSFVHL
Trigger: TAAGTGCACAAATGATAACAAGAGGATTATTCTCCC...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CCA 72 bp GTGGTACAGAAAATTATACGGTATATATTTGCCGTGTaGCAAAATATTCCTCGTTGGATCATGTCAGTGGAA +
Preference number: 3 (lower is better)
Translates to: VVQKIIRYIFAV*QNIPRWIMSVE
Trigger: TTCCACTGACATGATCCAACGAGGAATATTTTGCCACACGGCAAATATATACCGTATAATTTTCTGTACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR GCA 72 bp CTATCAAGTGGTACAGAAAATTATACGGTATATATTTaGCGTGTGGCAAAATATTCCTCGTTGGATCATGTC +
Preference number: 3 (lower is better)
Translates to: LSSGTENYTVYI*RVAKYSSLDHV
Trigger: GACATGATCCAACGAGGAATATTTTGCCACACGGCAAATATATACCGTATAATTTTCTGTACCACTTGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGCACGGCCCCTGTGGGTaGCGGTGGCCATGGGTGACG +
Preference number: 4 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQHGPCG*RWPWVT
Trigger: CGTCACCCATGGCCACCGTCACCCACAGGGGCCGTG...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCGCGCGTCCCAAGCGCTaGCGCGGCCGCCTCGCCTTT +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLARPKR*RGRLAF
Trigger: AAAGGCGAGGCGGCCGCGGCAGCGCTTGGGACGCGC...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307826.5
CDS-3UTR GCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCGCCCCGAACTTGGCCTaGTCCGGGGCGCAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRAAPNLA*SGAQGA
Trigger: CGCTCCCTGCGCCCCGGAGCAGGCCAAGTTCGGGGC...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307826.5
CDS-3UTR CCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCGGCACCCTCCCCCGCTaGCTCGACAGGGCATCCCCG +
Preference number: 4 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRAGTLPR*LDRASP
Trigger: CGGGGATGCCCTGTCGAGCCAGCGGGGGAGGGTGCC...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCTGGCGTCCTGGCCTGTaGGGACATGGGGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLWRPGL*GHGAPG
Trigger: CCCAGGCGCCCCATGTCCTCACAGGCCAGGACGCCA...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCGGGACGGTTCAAGGCTaGCCTGGGCTTGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLGTVQG*PGLARL
Trigger: GAGCCGGGCAAGCCCAGGGCAGCCTTGAACCGTCCC...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGGCATCCCCGATCTGCTaGAGCAGCCCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQASPIC*SSPRCR
Trigger: GCGGCAGCGTGGGCTGCTGCAGCAGATCGGGGATGC...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAGGCACCCTCCCCCGCTaGCTCGACAGGGCATCCCCG +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGGTLPR*LDRASP
Trigger: CGGGGATGCCCTGTCGAGCCAGCGGGGGAGGGTGCC...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGCACCCTCCCCCGCTaGCTCGACAGGGCATCCCCG +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPGTLPR*LDRASP
Trigger: CGGGGATGCCCTGTCGAGCCAGCGGGGGAGGGTGCC...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCAGCTGCCGGATGTGCGTaGCCGCGCTGCCGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPAAGCA*PRCRRR
Trigger: CCTCCTACGGCAGCGCGGTCACGCACATCCGGCAGC...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGGCCCACCGCACTCTATaGCATCGGCCACCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQAHRTL*HRPPGW
Trigger: CCAGCCTGGTGGCCGATGTCATAGAGTGCGGTGGGC...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGATGGGACCCCAGGCGGTaGGGGTGGGTAGCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGWDPRR*GWVAED
Trigger: GTCCTCGGCTACCCACCCTCACCGCCTGGGGTCCCA...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000427865.2
CDS-3UTR GCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCAGGGAGCGAGCCCGGTaGCCAGGCGCGTCCCAAGCG +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGRERAR*PGASQA
Trigger: CGCTTGGGACGCGCCTGGGCACCGGGCTCGCTCCCT...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307826.5
CDS-3UTR GCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCGCGGCACCGCAATGCTaGTCAGGTCGGGCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLAAPQC*SGRAAG
Trigger: TCCGGCAGCCCGACCTGAGCAGCATTGCGGTGCCGC...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGACCGGCGGCACCGCAATaGTGCTCAGGTCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGPAAPQ*CSGRAA
Trigger: GGCAGCCCGACCTGAGCAGCATTGCGGTGCCGCCGG...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGAGTAGCCCTGGAACTTaGGGTGGTCCGGCGGCACCG +
Preference number: 4 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQSSPGT*GGPAAP
Trigger: CGGTGCCGCCGGACCACCGCAAGTTCCAGGGCTACT...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCGCGGGGAAGCGAAACTaGCGGAAGACCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLAGKRN*RKTWPS
Trigger: GCTGGGCCAGGTCTTCCGGCAGTTTCGCTTCCCCGC...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTCCTGGCCCCGAACTTaGCCTGCTCCGGGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPSWPRT*PAPGRR
Trigger: CCTGCGCCCCGGAGCAGGCCAAGTTCGGGGCCAGGA...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000307826.5
CDS-3UTR CCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGAGTGGGGGCGCCAGGTaGACACGGCGGCCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRSGGAR*TRRPRN
Trigger: GTTCCGGGGCCGCCGTGTCCACCTGGCGCCCCCACT...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAGCCCTCCCACGTCAGTaGGGGCGCCAGGTGGACACG +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGALPRQ*GRQVDT
Trigger: CGTGTCCACCTGGCGCCCCCACTGACGTGGGAGGGC...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCTCCTCACGGCCCCTGTaGGTGACGGTGGCCATGGGT +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLSSRPL*VTVAMG
Trigger: ACCCATGGCCACCGTCACCCACAGGGGCCGTGAGGA...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTCGCCATCGAGAGCGCTaGCTGAGGGTGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPRHRER*LRVACQ
Trigger: CTGGCAGGCCACCCTCAGTCAGCGCTCTCGATGGCG...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCGCTGCCGGATGTGCGTaGCCGCGCTGCCGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGAAGCA*PRCRRR
Trigger: CCTCCTACGGCAGCGCGGTCACGCACATCCGGCAGC...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGCTGCCGGATGTGCGTaGCCGCGCTGCCGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRAAGCA*PRCRRR
Trigger: CCTCCTACGGCAGCGCGGTCACGCACATCCGGCAGC...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAATGGCGTCCTGGCCTGTaGGGACATGGGGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQEWRPGL*GHGAPG
Trigger: CCCAGGCGCCCCATGTCCTCACAGGCCAGGACGCCA...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCGGGTGGCCTGCCAGGTaGTGGGCGCGTCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLGWPAR*WARPEE
Trigger: TTCTTCTGGACGCGCCCAGCACCTGGCAGGCCACCC...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAACCGGCGGCACCGCAATaGTGCTCAGGTCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQEPAAPQ*CSGRAA
Trigger: GGCAGCCCGACCTGAGCAGCATTGCGGTGCCGCCGG...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGCCCCAACAAGCCCAGTaGCCCCCACCACACAGTGGT +
Preference number: 4 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQPQQAQ*PPPHSG
Trigger: ACCACTGTGTGGTGGGGGGCACTGGGCTTGTTGGGG...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCGGTTCAAGGCTGCCCTaGGCTTGCCCGGCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLGSRLP*ACPAPL
Trigger: CAAGGGAGCCGGGCAAGCCCAGGGCAGCCTTGAACC...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCGCCCTCCCACGTCAGTaGGGGCGCCAGGTGGACACG +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVALPRQ*GRQVDT
Trigger: CGTGTCCACCTGGCGCCCCCACTGACGTGGGAGGGC...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCGGGCCAGAGGCGTCCTaGTCACTGCTCCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLGPEAS*SLLHLV
Trigger: GACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCC...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCCCTGCTGCGGCCTCCTaGCTCTACAGGACGATCAGC +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLPAAAS*LYRTIS
Trigger: GCTGATCGTCCTGTAGAGCCAGGAGGCCGCAGCAGG...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGCTGGCCCCTCAGCCTTaGCAGGCTTCTCATGCAGGG +
Preference number: 4 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQLAPQP*QASHAG
Trigger: CCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAG...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAATCGAGAGCGCTGACTaGGGGTGGCCTGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPIESAD*GWPARC
Trigger: GCACCTGGCAGGCCACCCTCAGTCAGCGCTCTCGAT...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCGCCATCGAGAGCGCTaGCTGAGGGTGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGRHRER*LRVACQ
Trigger: CTGGCAGGCCACCCTCAGTCAGCGCTCTCGATGGCG...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGCGCCATCGAGAGCGCTaGCTGAGGGTGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRRHRER*LRVACQ
Trigger: CTGGCAGGCCACCCTCAGTCAGCGCTCTCGATGGCG...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGAATCACTTCCCGGGTaGGGCTGGCGGGGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPESLPG*GWRGRH
Trigger: ATGGCGACCCCGCCAGCCTCACCCGGGAAGTGATTC...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAGGCAGTGAGCCCCGATaGCCCACCAACTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGGSEPR*PTNSTR
Trigger: CCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGCC...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCGTCCAAGCGCCACTGTaGGGCCAACCCTGGTATCAG +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLVQAPL*GQPWYQ
Trigger: CTGATACCAGGGTTGGCCTCACAGTGGCGCTTGGAC...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCAAGGAGCCTGGGCCCTaGCGGTGGAGGAACCCCCAC +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVKEPGP*RWRNPH
Trigger: GTGGGGGTTCCTCCACCGTCAGGGCCCAGGCTCCTT...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCGCCCTCGGTGAAGAGTaGGGCCTGATCGCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSALGEE*GLIAAH
Trigger: GTGAGCGGCGATCAGGCCTCACTCTTCACCGAGGGC...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAGGGTGGCCTGCCAGGTaGTGGGCGCGTCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGGWPAR*WARPEE
Trigger: TTCTTCTGGACGCGCCCAGCACCTGGCAGGCCACCC...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGCATCCCCGATCTGCTaGAGCAGCCCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRASPIC*SSPRCR
Trigger: GCGGCAGCGTGGGCTGCTGCAGCAGATCGGGGATGC...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAACTGCTCAGGTCGGGCTaGCGGATGTGCGTGACCGCG +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQELLRSG*RMCVTA
Trigger: CGCGGTCACGCACATCCGGCAGCCCGACCTGAGCAG...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGCGGCACCGCAATGCTaGTCAGGTCGGGCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRAAPQC*SGRAAG
Trigger: TCCGGCAGCCCGACCTGAGCAGCATTGCGGTGCCGC...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAGCGGGGAAGCGAAACTaGCGGAAGACCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGAGKRN*RKTWPS
Trigger: GCTGGGCCAGGTCTTCCGGCAGTTTCGCTTCCCCGC...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCCCGCTGCCAGCGTCCTaGAGGCCCCTCCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVPLPAS*RPLLRE
Trigger: TTCCCTGAGGAGGGGCCTGCAGGACGCTGGCAGCGG...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCATGCCGTAGGAGGCGATaGCCTGGGCCGTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPCRRRR*PGPSPR
Trigger: ACGAGGAGACGGCCCAGGCCATCGCCTCCTACGGCA...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCCCCTGGAACTTGCGGTaGTCCGGCGGCACCGCAATG +
Preference number: 4 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSPWNLR*SGGTAM
Trigger: CATTGCGGTGCCGCCGGACCACCGCAAGTTCCAGGG...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTCCCTGGAACTTGCGGTaGTCCGGCGGCACCGCAATG +
Preference number: 4 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPPWNLR*SGGTAM
Trigger: CATTGCGGTGCCGCCGGACCACCGCAAGTTCCAGGG...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAGGGCCAGAGGCGTCCTaGTCACTGCTCCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGGPEAS*SLLHLV
Trigger: GACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCC...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGATCGAGAGCGCTGACTaGGGGTGGCCTGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRIESAD*GWPARC
Trigger: GCACCTGGCAGGCCACCCTCAGTCAGCGCTCTCGAT...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCATCGAGAGCGCTGACTaGGGGTGGCCTGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGIESAD*GWPARC
Trigger: GCACCTGGCAGGCCACCCTCAGTCAGCGCTCTCGAT...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCGAATCACTTCCCGGGTaGGGCTGGCGGGGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGESLPG*GWRGRH
Trigger: ATGGCGACCCCGCCAGCCTCACCCGGGAAGTGATTC...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCTGCGGTCACAGGCGATaGCCAGGATGGGAATCACCG +
Preference number: 4 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRACGHRR*PGWESP
Trigger: CGGTGATTCCCATCCTGGTCATCGCCTGTGACCGCA...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTCCCACCTCAGCTCATaGTGTGGCAAGGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPSHLSS*CGKEGP
Trigger: GGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGA...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGATCCCACCTCAGCTCATaGTGTGGCAAGGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGSHLSS*CGKEGP
Trigger: GGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGA...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGGGGCAGCATTTGCTGTaGGCTGGGAGCCATGTGTTG +
Preference number: 4 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQGQHLL*AGSHVL
Trigger: CAACACATGGCTCCCAGCTCACAGCAAATGCTGCCC...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAGCCAGCGATCAGGTCTaGGGCCTGGATTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGASDQV*GLDSTR
Trigger: CCTCGTGGAATCCAGGCCTCAGACCTGATCGCTGGC...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427865.2
CDS-3UTR GCA 90 bp CCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGAGGCTGCCCTGGGCTTaGCCGGCTCCCTTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PERAQCSYRRADSTSEITRLPWA*PAPLPA
Trigger: TGCGGGCAAGGGAGCCGGGCAAGCCCAGGGCAGCCT...CGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGGTGGCCTGCCAGGTaGTGGGCGCGTCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRGWPAR*WARPEE
Trigger: TTCTTCTGGACGCGCCCAGCACCTGGCAGGCCACCC...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCTGGGCCGTCTCCTCGTaGCCGCAGTCCTGGCTAACG +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGWAVSS*PQSWLT
Trigger: CGTTAGCCAGGACTGCGGGCACGAGGAGACGGCCCA...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGCGGGGAAGCGAAACTaGCGGAAGACCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRAGKRN*RKTWPS
Trigger: GCTGGGCCAGGTCTTCCGGCAGTTTCGCTTCCCCGC...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCAGATCTCAGGGCGTATaGAGGCCCGCCCCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGRSQGV*RPAPAA
Trigger: AGCGGCAGGGGCGGGCCTGCATACGCCCTGAGATCT...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAAAGATCTCAGGGCGTATaGAGGCCCGCCCCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQERSQGV*RPAPAA
Trigger: AGCGGCAGGGGCGGGCCTGCATACGCCCTGAGATCT...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCAGATCTCAGGGCGTATaGAGGCCCGCCCCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVRSQGV*RPAPAA
Trigger: AGCGGCAGGGGCGGGCCTGCATACGCCCTGAGATCT...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCAGCGATCTCAGGTCACTaGAACCACCCCGTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPAISGH*NHPVPG
Trigger: ACCCGGGACGGGGTGGTTGCAGTGACCTGAGATCGC...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCCTCCCCAGACAACTCTaGCACCATCTGGTGTCGAGC +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLLPRQL*HHLVSS
Trigger: GCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAG...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCCTGCATGACATGCTATaGGCATGGAGCGTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRALHDML*AWSVAA
Trigger: GGCCGCCACGCTCCATGCGCATAGCATGTCATGCAG...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTCAACTGCCCCCGCTCTaGCCGCTCCAGACACATGTG +
Preference number: 4 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPQLPPL*PLQTHV
Trigger: CACATGTGTCTGGAGCGGGCAGAGCGGGGGCAGTTG...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACACTGGGGCAGGGCTGCTaGACTGAGGGTGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTLGQGC*TEGASH
Trigger: GTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAAATTCCACGAGGCCGGTaGAAGCCAGGAGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQEIPRGR*KPGASP
Trigger: GGGGCTGGCTCCTGGCTTGCACCGGCCTCGTGGAAT...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427865.2
CDS-3UTR CCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGTTCAAGGCTGCCCTaGGCTTGCCCGGCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRGSRLP*ACPAPL
Trigger: CAAGGGAGCCGGGCAAGCCCAGGGCAGCCTTGAACC...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCTCCACCTCGGCGTCTTaGGCCAGGCGAATCACTTCC +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLSTSAS*ARRITS
Trigger: GGAAGTGATTCGCCTGGCCCAAGACGCCGAGGTGGA...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAATGCCGTAGGAGGCGATaGCCTGGGCCGTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQECRRRR*PGPSPR
Trigger: ACGAGGAGACGGCCCAGGCCATCGCCTCCTACGGCA...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCCTGGAACTTGCGGTaGTCCGGCGGCACCGCAATG +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGPWNLR*SGGTAM
Trigger: CATTGCGGTGCCGCCGGACCACCGCAAGTTCCAGGG...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGCAGCTCAGGCCTGCTaGCGTCCACCATCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPAAQAC*RPPSAP
Trigger: AGGAGCAGATGGTGGACGCCAGCAGGCCTGAGCTGC...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCTCAAAGAACTGCCCGTaGCTCACACCCTTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLSKNCP*LTPLRP
Trigger: TGGCCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGA...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACACGGCGGCCCCGGAACTaGAAGGTGACAATACCCCGG +
Preference number: 4 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTRRPRN*KVTIPR
Trigger: CCGGGGTATTGTCACCTTCCAGTTCCGGGGCCGCCG...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGCGGCGGCCCCGGAACTaGAAGGTGACAATACCCCGG +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRRRPRN*KVTIPR
Trigger: CCGGGGTATTGTCACCTTCCAGTTCCGGGGCCGCCG...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGCAGGCCGATGCAGCCTaGGGACTGTGGTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRQADAA*GLWSHL
Trigger: GAGGTGGGACCACAGTCCCCAGGCTGCATCGGCCTG...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCAGGCCGATGCAGCCTaGGGACTGTGGTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGQADAA*GLWSHL
Trigger: GAGGTGGGACCACAGTCCCCAGGCTGCATCGGCCTG...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCCAGGCCGATGCAGCCTaGGGACTGTGGTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVQADAA*GLWSHL
Trigger: GAGGTGGGACCACAGTCCCCAGGCTGCATCGGCCTG...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCGGGCCAGAGGCGTCCTaGTCACTGCTCCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVGPEAS*SLLHLV
Trigger: GACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCC...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCCACTGGGGTTGCGTTTaGGAGTCCAAGCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLHWGCV*ESKRHC
Trigger: ACAGTGGCGCTTGGACTCCCAAACGCAACCCCAGTG...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCACGGCCAAACTCCTCCTaGCTCCACCGGAAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPRPNSS*LHRKGH
Trigger: GTGCCCTTTCCGGTGGAGCCAGGAGGAGTTTGGCCG...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTCGGCCAAACTCCTCCTaGCTCCACCGGAAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPRPNSS*LHRKGH
Trigger: GTGCCCTTTCCGGTGGAGCCAGGAGGAGTTTGGCCG...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCGGAGGTGGTCACAGCTaGAGGCAGAAGCAGGAATGC +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLGGGHS*RQKQEC
Trigger: GCATTCCTGCTTCTGCCTCCAGCTGTGACCACCTCC...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCGGCTCAGGAGGGCCTTaGCCAGACTCCATCAGACAT +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLGSGGP*PDSIRH
Trigger: ATGTCTGATGGAGTCTGGCCAAGGCCCTCCTGAGCC...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGATGCGGTCACAGGCGATaGCCAGGATGGGAATCACCG +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGCGHRR*PGWESP
Trigger: CGGTGATTCCCATCCTGGTCATCGCCTGTGACCGCA...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCAACTCCACCAGGCCCTaGCAAGGAAGCCCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLNSTRP*QGSPFG
Trigger: ACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTT...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACACAGCTGGGCATGGGCTaGGGAGAGGTCTTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTQLGMG*GEVLLA
Trigger: GGCAAGCAAGACCTCTCCTCAGCCCATGCCCAGCTG...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCCAGCTGGGCATGGGCTaGGGAGAGGTCTTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVQLGMG*GEVLLA
Trigger: GGCAAGCAAGACCTCTCCTCAGCCCATGCCCAGCTG...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCGAACTCCTGACTTCGTaGTCCGTCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSELLTS*SVRLSL
Trigger: GAGGCTGAGGCGGACGGATCACGAAGTCAGGAGTTC...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCATACCAGGAGACCCCTaGAGGTGCTCCTTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLIPGDP*RCSLLQ
Trigger: CTGAAGCAAGGAGCACCTTCAGGGGTCTCCTGGTAT...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGACCAGTGAGTGGAACGTaGGGGAAGGCTGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGPVSGT*GKAVCP
Trigger: TGGGCAGACAGCCTTCCCTCACGTTCCACTCACTGG...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAAGGCTGCTGGGTAGCTaGCTTCCCCAAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPRLLGS*LPQEGL
Trigger: CAGCCCTTCTTGGGGAAGTCAGCTACCCAGCAGCCT...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427865.2
CDS-3UTR GCA 90 bp CGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGGGGACGGTTCAAGGCTaGCCTGGGCTTGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: RKGHNAAIAGPIPRLKSRGTVQG*PGLARL
Trigger: GAGCCGGGCAAGCCCAGGGCAGCCTTGAACCGTCCC...CCGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCCCACCATCTGCTCCTTaGCGTTGTCATTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLPPSAP*RCHSRP
Trigger: CGGCCTGGAATGACAACGGCAAGGAGCAGATGGTGG...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAAGAGCAGCTCAGGCCTaGTGGCGTCCACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPRAAQA*WRPPSA
Trigger: AGCAGATGGTGGACGCCAGCAGGCCTGAGCTGCTCT...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAACCCCAACAAGCCCAGTaGCCCCCACCACACAGTGGT +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQEPQQAQ*PPPHSG
Trigger: ACCACTGTGTGGTGGGGGGCACTGGGCTTGTTGGGG...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCCACTCTCACTGGGGTTaGGTTTGGGAGTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLHSHWG*VWESKR
Trigger: GCGCTTGGACTCCCAAACGCAACCCCAGTGAGAGTG...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCATGGGAGGTTGGAGCTaGTCCCAAGGCCACGGCCCT +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGMGGWS*SQGHGP
Trigger: AGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCAT...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGATTGAGGAGGGAAGGCTaGCCGGAAGGCAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGLRREG*PEGSLS
Trigger: GGACAGACTGCCTTCCGGGCAGCCTTCCCTCCTCAA...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGAGAGGAGGAGGCAGCTaGCATCCACCCTTTACCTTC +
Preference number: 4 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQRGGGS*HPPFTF
Trigger: GAAGGTAAAGGGTGGATGGCAGCTGCCTCCTCCTCT...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGAACCAGGGCAGCATTTaGTGTGAGCTGGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQNQGSI*CELGAM
Trigger: CATGGCTCCCAGCTCACAGCAAATGCTGCCCTGGTT...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGACCGAGGACTACAGGCTaGTGGGTAGCTGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGPRTTG*WVADFP
Trigger: GGGGAAGTCAGCTACCCAGCAGCCTGTAGTCCTCGG...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427865.2
CDS-3UTR CCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCATCCACCTCGGCGTCTTaGGCCAGGCGAATCACTTCC +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPSTSAS*ARRITS
Trigger: GGAAGTGATTCGCCTGGCCCAAGACGCCGAGGTGGA...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCTCGTGCCCGCAGTCCTaGCTAACGATGATGGGGAAG +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLSCPQS*LTMMGK
Trigger: CTTCCCCATCATCGTTAGCCAGGACTGCGGGCACGA...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACAGCAGCTCAGGCCTGCTaGCGTCCACCATCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTAAQAC*RPPSAP
Trigger: AGGAGCAGATGGTGGACGCCAGCAGGCCTGAGCTGC...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCGCAGCTCAGGCCTGCTaGCGTCCACCATCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVAAQAC*RPPSAP
Trigger: AGGAGCAGATGGTGGACGCCAGCAGGCCTGAGCTGC...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAAGGCCTTTGGCCACTTaGGCTCCAGCTCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPRPLAT*APAQPR
Trigger: TCTGGGCTGAGCTGGAGCCCAAGTGGCCAAAGGCCT...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCTCAAAGAACTGCCCGTaGCTCACACCCTTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLSKNCP*LTPLRP
Trigger: TGGCCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGA...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCGGACGTGGACATTTCTaGCCCCAACAAGCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLGRGHF*PQQAQC
Trigger: GCACTGGGCTTGTTGGGGCCAGAAATGTCCACGTCC...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACACCCCTGGGCTGTCCCTaGCTCTTCCCTCCCACTCAT +
Preference number: 4 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTPLGCP*LFPPTH
Trigger: ATGAGTGGGAGGGAAGAGCCAGGGACAGCCCAGGGG...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCGTTTCTGAGCCCAGATaGGAGGTTGGAGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRAVSEPR*EVGAAP
Trigger: GGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAAC...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCATATGCGCATGGAGCGTaGCGGCCAAACTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPYAHGA*RPNSSW
Trigger: CCAGGAGGAGTTTGGCCGCCACGCTCCATGCGCATA...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGAGTGCAGCTGGGGAATaGCCTGGAAGAGGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQSAAGE*PGRGRK
Trigger: TTTACGGCCTCTTCCAGGCCATTCCCCAGCTGCACT...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAATTTCCGTCCGGCGCTaGGATCCAGGCTTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGISVRR*DPGFLL
Trigger: GAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAAT...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCTGCGGTCACAGGCGATaGCCAGGATGGGAATCACCG +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVCGHRR*PGWESP
Trigger: CGGTGATTCCCATCCTGGTCATCGCCTGTGACCGCA...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCACCTTGGCGAAAGCCTTaGAGCTGTCCCTGCCCGTAT +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPPWRKP*SCPCPY
Trigger: ATACGGGCAGGGACAGCTTCAAGGCTTTCGCCAAGG...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTCCTTGGCGAAAGCCTTaGAGCTGTCCCTGCCCGTAT +
Preference number: 4 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPPWRKP*SCPCPY
Trigger: ATACGGGCAGGGACAGCTTCAAGGCTTTCGCCAAGG...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAACCCGGAACTGGAAGGTaGCAATACCCCGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQEPGTGR*QYPGSQ
Trigger: CTGGCTACCGGGGTATTGTCACCTTCCAGTTCCGGG...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCCCTCAACCATCTGTGTaGCCTTGGGCAACTTCACCT +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLPQPSV*PWATSP
Trigger: AGGTGAAGTTGCCCAAGGTCACACAGATGGTTGAGG...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCCTTGCTTCAGGAGCCTaGGAACCCAGTCTTTCGTCT +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLLASGA*EPSLSS
Trigger: AGACGAAAGACTGGGTTCTCAGGCTCCTGAAGCAAG...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCCACCTGAGCAAGCCTTaGTGGGTGAATACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLHLSKP*WVNTRR
Trigger: TCTCCTGGTATTCACCCATCAAGGCTTGCTCAGGTG...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCCCACTGGGGGCGACTTaGTCCACAAATGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRAPLGAT*STNEIP
Trigger: TGGGATCTCATTTGTGGATCAAGTCGCCCCCAGTGG...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCTCTTGGCCTGCTCTaGGGGCTTCGTCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGPLGLL*GLRLRF
Trigger: GAAACGGAGACGAAGCCCTCAGAGCAGGCCAAGAGG...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCACCATGCACCTGTCGCTaGGCCAGGAGTAAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPPCTCR*ARSKVW
Trigger: CCAGACTTTACTCCTGGCTCAGCGACAGGTGCATGG...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427865.2
CDS-3UTR GCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCACAAGCCCTGCAGACTaGTTCTTCAGCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLTSPAD*FFSILA
Trigger: GGCCAGGATGCTGAAGAAGCAGTCTGCAGGGCTTGT...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGAGTAGCCCTGGAACTTaGGGTGGTCCGGCGGCACCG +
Preference number: 4 (lower is better)
Translates to: RKGHNAAIAGPIPRLKSRSSPGT*GGPAAP
Trigger: CGGTGCCGCCGGACCACCGCAAGTTCCAGGGCTACT...CCGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGGCGGGGAAGCGAAACTaGCGGAAGACCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RKGHNAAIAGPIPRLKSRAGKRN*RKTWPS
Trigger: GCTGGGCCAGGTCTTCCGGCAGTTTCGCTTCCCCGC...CCGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCACAGGGAAAAAGTCGGTaGGGTAGAGCAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPQGKSR*GRAAQA
Trigger: GGCCTGAGCTGCTCTACCGCACCGACTTTTTCCCTG...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGACAGGGAAAAAGTCGGTaGGGTAGAGCAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGQGKSR*GRAAQA
Trigger: GGCCTGAGCTGCTCTACCGCACCGACTTTTTCCCTG...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGACGTGGCTCACACCCTTaGGGCCAAAGGTCATCGTTC +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGRGSHP*GQRSSF
Trigger: GAACGATGACCTTTGGCCGCAAGGGTGTGAGCCACG...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCTGCTGGTCAAAGAACTaGCCGTGGCTCACACCCTTG +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLCWSKN*PWLTPL
Trigger: CAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCA...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTCAAGGCCTTCCTCCCTaGACCTCTCTCCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPQGLPP*TSLLTA
Trigger: AGCTGTCAGGAGAGAGGTGCAGGGAGGAAGGCCTTG...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCAGGCGTCCTGGTCACTaGTCCACCTGGTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVRRPGH*STWSLL
Trigger: GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCT...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCACTCCCCAGACAACTCTaGCACCATCTGGTGTCGAGC +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPLPRQL*HHLVSS
Trigger: GCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAG...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCTCCCTTCCCCTCTCCTaGTTCCTGGTAGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLSLPLS*FLVAEP
Trigger: TGGTTCAGCTACCAGGAAGCAGGAGAGGGGAAGGGA...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTCTGGGGCAGGGCTGCTaGACTGAGGGTGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: IDLSFPSGAGIQASCSATLGQGC*TEGASH
Trigger: GTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAATCCACCTCGGCGTCTTaGGCCAGGCGAATCACTTCC +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQESTSAS*ARRITS
Trigger: GGAAGTGATTCGCCTGGCCCAAGACGCCGAGGTGGA...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCGGCACCCTCCCCCGCTaGCTCGACAGGGCATCCCCG +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLGTLPR*LDRASP
Trigger: CGGGGATGCCCTGTCGAGCCAGCGGGGGAGGGTGCC...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGATCGTGCCCGCAGTCCTaGCTAACGATGATGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGSCPQS*LTMMGK
Trigger: CTTCCCCATCATCGTTAGCCAGGACTGCGGGCACGA...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACAAGGCCTTTGGCCACTTaGGCTCCAGCTCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTRPLAT*APAQPR
Trigger: TCTGGGCTGAGCTGGAGCCCAAGTGGCCAAAGGCCT...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAAAGGCCTTTGGCCACTTaGGCTCCAGCTCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQERPLAT*APAQPR
Trigger: TCTGGGCTGAGCTGGAGCCCAAGTGGCCAAAGGCCT...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCATCAAAGAACTGCCCGTaGCTCACACCCTTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPSKNCP*LTPLRP
Trigger: TGGCCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGA...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCAGTGGGGGCGCCAGGTaGACACGGCGGCCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGASGGAR*TRRPRN
Trigger: GTTCCGGGGCCGCCGTGTCCACCTGGCGCCCCCACT...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGACCTCAGCTCATGATGTaGCAAGGAGGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGPQLMM*QGGAQE
Trigger: TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGG...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACAAGGACATGGGGCGCCTaGGAGCGGGCGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTRTWGA*ERAGRL
Trigger: CAGCCTCCCCGCCCGCTCCCAGGCGCCCCATGTCCT...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTAGGACATGGGGCGCCTaGGAGCGGGCGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIRTWGA*ERAGRL
Trigger: CAGCCTCCCCGCCCGCTCCCAGGCGCCCCATGTCCT...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGACTCCACCTTGTGGCCTaGACTTCCTTTCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGLHLVA*TSFPTW
Trigger: CCAGGTGGGAAAGGAAGTCCAGGCCACAAGGTGGAG...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGTCCCGCCATCTCTCCTaGACCTCCCCGAGCCACGCA +
Preference number: 4 (lower is better)
Translates to: PERAQCSYRRADSTSEITSRHLS*TSPSHA
Trigger: TGCGTGGCTCGGGGAGGTCCAGGAGAGATGGCGGGA...CGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGTGTAAGGGGGTCCTCTaGCACCGCAGGCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRCKGVL*HRRPQT
Trigger: AGTTTGGGGCCTGCGGTGCCAGAGGACCCCCTTACA...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCAGCCAAGGGAGGCAGTaGGGGAAAGTAACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLSQGRQ*GKVTAL
Trigger: CAAGGCTGTTACTTTCCCCCACTGCCTCCCTTGGCT...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACAATTTCCGTCCGGCGCTaGGATCCAGGCTTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTISVRR*DPGFLL
Trigger: GAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAAT...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCCCACATTCCAGTGAGTaGAACGTGAGGGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLPHSSE*NVREGC
Trigger: ACAGCCTTCCCTCACGTTCCACTCACTGGAATGTGG...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGTCCTCACGGCCCCTGTaGGTGACGGTGGCCATGGGT +
Preference number: 4 (lower is better)
Translates to: PERAQCSYRRADSTSEITSSRPL*VTVAMG
Trigger: ACCCATGGCCACCGTCACCCACAGGGGCCGTGAGGA...CGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCATCAGGTCTGAGGCCTaGATTCCACGAGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGIRSEA*IPRGRC
Trigger: GCACCGGCCTCGTGGAATCCAGGCCTCAGACCTGAT...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427865.2
CDS-3UTR TCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCGCCATCGAGAGCGCTaGCTGAGGGTGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTRHRER*LRVACQ
Trigger: CTGGCAGGCCACCCTCAGTCAGCGCTCTCGATGGCG...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCGCTGCCGGATGTGCGTaGCCGCGCTGCCGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLAAGCA*PRCRRR
Trigger: CCTCCTACGGCAGCGCGGTCACGCACATCCGGCAGC...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACACCTTGGCGAAAGCCTTaGAGCTGTCCCTGCCCGTAT +
Preference number: 4 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTPWRKP*SCPCPY
Trigger: ATACGGGCAGGGACAGCTTCAAGGCTTTCGCCAAGG...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTGCTCCACCTCATGCTaGGAGGAGCCTGTGTGTCAA +
Preference number: 4 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPCSTSC*EEPVCQ
Trigger: TTGACACACAGGCTCCTCTCAGCATGAGGTGGAGCA...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCATCTGACACTGGTTTCTaGGCCCAGATGGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPSDTGF*AQMGGW
Trigger: CCAACCTCCCATCTGGGCTCAGAAACCAGTGTCAGA...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCGTCCTGGAGACAGAGTaGGCAGGAACCCACAGTGAG +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVVLETE*AGTHSE
Trigger: CTCACTGTGGGTTCCTGCTCACTCTGTCTCCAGGAC...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCACTGCTTCCTGGTAGCTaGACCAGGGCAGCATTTGCT +
Preference number: 4 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPLLPGS*TRAAFA
Trigger: AGCAAATGCTGCCCTGGTTCAGCTACCAGGAAGCAG...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCTTGTTCCATAAAGAATaGGGCTTGCCCTCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLLFHKE*GLPSLP
Trigger: GGGAAGGGAGGGCAAGCCTCATTCTTTATGGAACAA...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTCACGGCCCCTGTGGGTaGCGGTGGCCATGGGTGACG +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIHGPCG*RWPWVT
Trigger: CGTCACCCATGGCCACCGTCACCCACAGGGGCCGTG...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAAACCAGTCTCCTAGATaGCACTGCTCCCCACCCTTG +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPNQSPR*HCSPPL
Trigger: CAAGGGTGGGGAGCAGTGTCATCTAGGAGACTGGTT...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCTTGTGCTGGGGCTCATaGGAAGAAACAGGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLLCWGS*EETGLR
Trigger: TCTAAGGCCTGTTTCTTCTCATGAGCCCCAGCACAA...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333055.8
CDS-3UTR GCA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGCTGCTCAGGTCGGGCTaGCGGATGTGCGTGACCGCG +
Preference number: 4 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQLLRSG*RMCVTA
Trigger: CGCGGTCACGCACATCCGGCAGCCCGACCTGAGCAG...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTCTGCTCAGGTCGGGCTaGCGGATGTGCGTGACCGCG +
Preference number: 4 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPLLRSG*RMCVTA
Trigger: CGCGGTCACGCACATCCGGCAGCCCGACCTGAGCAG...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAACCACCATCTGCTCCTTaGCGTTGTCATTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQEPPSAP*RCHSRP
Trigger: CGGCCTGGAATGACAACGGCAAGGAGCAGATGGTGG...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAACAGGGAAAAAGTCGGTaGGGTAGAGCAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQEQGKSR*GRAAQA
Trigger: GGCCTGAGCTGCTCTACCGCACCGACTTTTTCCCTG...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCGTGGCTCACACCCTTaGGGCCAAAGGTCATCGTTC +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGRGSHP*GQRSSF
Trigger: GAACGATGACCTTTGGCCGCAAGGGTGTGAGCCACG...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCCGTGGCTCACACCCTTaGGGCCAAAGGTCATCGTTC +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVRGSHP*GQRSSF
Trigger: GAACGATGACCTTTGGCCGCAAGGGTGTGAGCCACG...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCATGCTGGTCAAAGAACTaGCCGTGGCTCACACCCTTG +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPCWSKN*PWLTPL
Trigger: CAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCA...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp GGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGTCCCTGCCCGTATACTaGACCCGCACCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GVWSRERTLPNSLHMLQESLPVY*TRTSPS
Trigger: GCTGGGGGAGGTGCGGGTGCAGTATACGGGCAGGGA...CTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGCCCCAACAAGCCCAGTaGCCCCCACCACACAGTGGT +
Preference number: 4 (lower is better)
Translates to: PERAQCSYRRADSTSEITPQQAQ*PPPHSG
Trigger: ACCACTGTGTGGTGGGGGGCACTGGGCTTGTTGGGG...CGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCGCTGAGGAGAGGTCTTaGTTGCCCCCTTCAACTTTC +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLAEERS*LPPSTF
Trigger: GAAAGTTGAAGGGGGCAAGCAAGACCTCTCCTCAGC...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCCAAGGCCTTCCTCCCTaGACCTCTCTCCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVQGLPP*TSLLTA
Trigger: AGCTGTCAGGAGAGAGGTGCAGGGAGGAAGGCCTTG...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGAAGTCCTCTCCATCCTaGCATGGCGTCCTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRKSSPS*HGVLAC
Trigger: ACAGGCCAGGACGCCATGGCAGGATGGAGAGGACTT...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGACTCACCAGCTTTCCTaGTGCGGCCTCCTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRTHQLS*CGLLAL
Trigger: TAGAGCCAGGAGGCCGCAGCAGGAAAGCTGGTGAGT...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCACTCACCAGCTTTCCTaGTGCGGCCTCCTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVTHQLS*CGLLAL
Trigger: TAGAGCCAGGAGGCCGCAGCAGGAAAGCTGGTGAGT...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCAGCTGGAGTGCAGTGGTaGGATCTCAGGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPAGVQW*DLRSLQ
Trigger: TTGCAGTGACCTGAGATCGCACCACTGCACTCCAGC...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTCCCACCCTCTTGGCCTaGTCTGAGGGCTTCGTCTCC +
Preference number: 4 (lower is better)
Translates to: IDLSFPSGAGIQASCSATPTLLA*SEGFVS
Trigger: GGAGACGAAGCCCTCAGAGCAGGCCAAGAGGGTGGG...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGGGGATCCAGGCTTCCTaGTCTGCAACTGAATCCATT +
Preference number: 4 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQGIQAS*SATESI
Trigger: AATGGATTCAGTTGCAGAGCAGGAAGCCTGGATCCC...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGAGCTCCCCATCACCCTaGCCTCTCCAAATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRSSPSP*PLQILV
Trigger: GACGAGGATTTGGAGAGGGCAGGGTGATGGGGAGCT...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACAAGCTCCCCATCACCCTaGCCTCTCCAAATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTSSPSP*PLQILV
Trigger: GACGAGGATTTGGAGAGGGCAGGGTGATGGGGAGCT...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCATCCCTTCCCCTCTCCTaGTTCCTGGTAGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPSLPLS*FLVAEP
Trigger: TGGTTCAGCTACCAGGAAGCAGGAGAGGGGAAGGGA...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCACCTTGCAGGGAAGGCTaGCTGTCTCTAGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPPCREG*LSLAIF
Trigger: GAAGATGGCTAGAGACAGGCAGCCTTCCCTGCAAGG...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGCCTCATTGCCCTTaGAGGGAAGGCTGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPLPHCP*REGCLS
Trigger: AGACAGGCAGCCTTCCCTGCAAGGGCAATGAGGCAA...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGGTCCAAAGTGAAATTTaGAGTGCTCCTCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQVQSEI*SAPPSS
Trigger: GGAGCTGGGAGGAGCACTGCAAATTTCACTTTGGAC...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333055.8
CDS-3UTR CCA 90 bp TTTCCATCTGGCATTTCCACTTGCTTTGGTATCCACAGGCGCTTCCGGGCCCGGGGTTCAAGGCTGCCCTaGGCTTGCCCGGCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: FPSGISTCFGIHRRFRARGSRLP*ACPAPL
Trigger: CAAGGGAGCCGGGCAAGCCCAGGGCAGCCTTGAACC...CCGGGCCCGGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGATGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCTCAGCAGCGGATAGGTaGCCCGAAAGTACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLSAADR*PESTRR
Trigger: TCTTCGAGTACTTTCGGGCCACCTATCCGCTGCTGA...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCTCAAAGAACTGCCCGTaGCTCACACCCTTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVSKNCP*LTPLRP
Trigger: TGGCCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGA...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACAGTGGGGGCGCCAGGTaGACACGGCGGCCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHSGGAR*TRRPRN
Trigger: GTTCCGGGGCCGCCGTGTCCACCTGGCGCCCCCACT...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCAGTGGGGGCGCCAGGTaGACACGGCGGCCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASSGGAR*TRRPRN
Trigger: GTTCCGGGGCCGCCGTGTCCACCTGGCGCCCCCACT...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCGCCCTCCCACGTCAGTaGGGGCGCCAGGTGGACACG +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGAALPRQ*GRQVDT
Trigger: CGTGTCCACCTGGCGCCCCCACTGACGTGGGAGGGC...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTGCCCTCCCACGTCAGTaGGGGCGCCAGGTGGACACG +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIALPRQ*GRQVDT
Trigger: CGTGTCCACCTGGCGCCCCCACTGACGTGGGAGGGC...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGCCTCAGCTCATGATGTaGCAAGGAGGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRPQLMM*QGGAQE
Trigger: TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGG...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCGGACGTGGACATTTCTaGCCCCAACAAGCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGGRGHF*PQQAQC
Trigger: GCACTGGGCTTGTTGGGGCCAGAAATGTCCACGTCC...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCACAGGGAGAAGGGGTCTaGTCAAGAGAGCGAACGTTG +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPQGEGV*SRERTL
Trigger: CAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTG...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGGGAGGGCTCGTGCCCTaGCTGGAAGAGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GVWSRERTLPNSLHMLQEGGLVP*LEEPGQ
Trigger: CTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCC...CTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACAGGACATGGGGCGCCTaGGAGCGGGCGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHRTWGA*ERAGRL
Trigger: CAGCCTCCCCGCCCGCTCCCAGGCGCCCCATGTCCT...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGAGGACATGGGGCGCCTaGGAGCGGGCGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWRTWGA*ERAGRL
Trigger: CAGCCTCCCCGCCCGCTCCCAGGCGCCCCATGTCCT...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTGGCCCCCATCCCCTaGGCTGTCCCTGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTLAPIP*AVPGSS
Trigger: GGAAGAGCCAGGGACAGCCCAGGGGATGGGGGCCAG...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGCCTGCTGCGGCCTCCTaGCTCTACAGGACGATCAGC +
Preference number: 4 (lower is better)
Translates to: PERAQCSYRRADSTSEITPAAAS*LYRTIS
Trigger: GCTGATCGTCCTGTAGAGCCAGGAGGCCGCAGCAGG...CGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCTGATCAGAGGACCTaGTTCTTCCCCAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGPDQRT*FFPRPG
Trigger: GCCTGGTCTGGGGAAGAACCAGGTCCTCTGATCAGG...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCCCTGATCAGAGGACCTaGTTCTTCCCCAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVPDQRT*FFPRPG
Trigger: GCCTGGTCTGGGGAAGAACCAGGTCCTCTGATCAGG...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGCTGCAAACTCGAGGCTaGCTGAACTCTACAGCATTG +
Preference number: 4 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQLQTRG*LNSTAL
Trigger: CAATGCTGTAGAGTTCAGCCAGCCTCGAGTTTGCAG...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACAGGAGGTGGTCACAGCTaGAGGCAGAAGCAGGAATGC +
Preference number: 4 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTGGGHS*RQKQEC
Trigger: GCATTCCTGCTTCTGCCTCCAGCTGTGACCACCTCC...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGCTGGCCCCTCAGCCTTaGCAGGCTTCTCATGCAGGG +
Preference number: 4 (lower is better)
Translates to: PERAQCSYRRADSTSEITLAPQP*QASHAG
Trigger: CCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAG...CGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCAGGCTGAAGGACCTCTaGTGGCAAAACACTGACCTC +
Preference number: 4 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRARLKDL*WQNTDL
Trigger: GAGGTCAGTGTTTTGCCACCAGAGGTCCTTCAGCCT...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTCGCCATCGAGAGCGCTaGCTGAGGGTGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIRHRER*LRVACQ
Trigger: CTGGCAGGCCACCCTCAGTCAGCGCTCTCGATGGCG...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAAACAGGTCCAGCTGGGTaGAGTGCACAAACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQETGPAG*SAQTAG
Trigger: ACCAGCAGTTTGTGCACTTCACCCAGCTGGACCTGT...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGACAGGTCCAGCTGGGTaGAGTGCACAAACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRTGPAG*SAQTAG
Trigger: ACCAGCAGTTTGTGCACTTCACCCAGCTGGACCTGT...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCATAGTCCCTCTCTaGGGTAAGGCAAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRGIVPL*GKARER
Trigger: CCTCTCTCTTGCCTTACCTCAGAGAGGGACTATGCC...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCTGCTCCACCTCATGCTaGGAGGAGCCTGTGTGTCAA +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGCSTSC*EEPVCQ
Trigger: TTGACACACAGGCTCCTCTCAGCATGAGGTGGAGCA...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTGGCGTCCTGGCCTGTaGGGACATGGGGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASWRPGL*GHGAPG
Trigger: CCCAGGCGCCCCATGTCCTCACAGGCCAGGACGCCA...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTTGGCGTCCTGGCCTGTaGGGACATGGGGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPWRPGL*GHGAPG
Trigger: CCCAGGCGCCCCATGTCCTCACAGGCCAGGACGCCA...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTATCAGCTGTGTACCCTaGGGCTCCCCGGCACGTCAT +
Preference number: 4 (lower is better)
Translates to: IDLSFPSGAGIQASCSATISCVP*GSPARH
Trigger: ATGACGTGCCGGGGAGCCTCAGGGTACACAGCTGAT...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCCTGGTGGCAAAACACTaGCCTCTACAGAGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLLVAKH*PLQRSH
Trigger: ATGAGACCTCTGTAGAGGTCAGTGTTTTGCCACCAG...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCTTCCTAAACTCCCTGTaGATTGCCAGGGGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLFLNSL*IARGQN
Trigger: ATTCTGGCCCCTGGCAATTCACAGGGAGTTTAGGAA...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTGCCCACCGCACTCTATaGCATCGGCCACCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTAHRTL*HRPPGW
Trigger: CCAGCCTGGTGGCCGATGTCATAGAGTGCGGTGGGC...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCAGACCACATTCCAGTaGGTGGAACGTGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGQTTFQ*VEREGR
Trigger: CCTTCCCTCACGTTCCACTCACTGGAATGTGGTCTG...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACGACGGTGGCCATGGGTaGCGGTGGCCGTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHDGGHG*RWPWAT
Trigger: AGTGGCCCACGGCCACCGTCACCCATGGCCACCGTC...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAAACAAGCCCTGCAGACTaGTTCTTCAGCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQETSPAD*FFSILA
Trigger: GGCCAGGATGCTGAAGAAGCAGTCTGCAGGGCTTGT...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCACAAGCCCTGCAGACTaGTTCTTCAGCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGTSPAD*FFSILA
Trigger: GGCCAGGATGCTGAAGAAGCAGTCTGCAGGGCTTGT...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCATCCCCGATCTGCTaGAGCAGCCCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RFTLPTICESEIQAALGWASPIC*SSPRCR
Trigger: GCGGCAGCGTGGGCTGCTGCAGCAGATCGGGGATGC...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCGCATCCCCGATCTGCTaGAGCAGCCCACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGAASPIC*SSPRCR
Trigger: GCGGCAGCGTGGGCTGCTGCAGCAGATCGGGGATGC...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCGCGGCACCGCAATGCTaGTCAGGTCGGGCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLAAPQC*SGRAAG
Trigger: TCCGGCAGCCCGACCTGAGCAGCATTGCGGTGCCGC...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTCCGGCGGCACCGCAATaGTGCTCAGGTCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPPAAPQ*CSGRAA
Trigger: GGCAGCCCGACCTGAGCAGCATTGCGGTGCCGCCGG...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGCCGGCGGCACCGCAATaGTGCTCAGGTCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWPAAPQ*CSGRAA
Trigger: GGCAGCCCGACCTGAGCAGCATTGCGGTGCCGCCGG...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCTGCTGGTCAAAGAACTaGCCGTGGCTCACACCCTTG +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGCWSKN*PWLTPL
Trigger: CAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCA...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTCCAGCTGGGTGAAGTaGACAAACTGCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPSSWVK*TNCWFS
Trigger: GCTGAACCAGCAGTTTGTGCACTTCACCCAGCTGGA...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCCAAGAGAGCGAACGTTaGCAAACTCTCTGCACATGC +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLQESER*QTLCTC
Trigger: GCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTG...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCAGGAGAGGTCTTGCTTaGCCCCTTCAACTTTCCATC +
Preference number: 4 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRARRGLA*PLQLSI
Trigger: GATGGAAAGTTGAAGGGGGCAAGCAAGACCTCTCCT...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCATGCACTTGGCTAGCTaGATGACATGCTATGCGCAT +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLMHLAS*MTCYAH
Trigger: ATGCGCATAGCATGTCATGCAGCTAGCCAAGTGCAT...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGCCCACCCTCTTGGCCTaGTCTGAGGGCTTCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GVWSRERTLPNSLHMLQEPTLLA*SEGFVS
Trigger: GGAGACGAAGCCCTCAGAGCAGGCCAAGAGGGTGGG...CTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTTGGCTGGGGCAGGGCTaGTGCACTGAGGGTGCATCC +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTWLGQG*CTEGAS
Trigger: GGATGCACCCTCAGTGCAGCAGCCCTGCCCCAGCCA...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCTTGCCTCATTGCCCTTaGAGGGAAGGCTGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGLPHCP*REGCLS
Trigger: AGACAGGCAGCCTTCCCTGCAAGGGCAATGAGGCAA...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACACCGCTGCCAGCGTCCTaGAGGCCCCTCCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTPLPAS*RPLLRE
Trigger: TTCCCTGAGGAGGGGCCTGCAGGACGCTGGCAGCGG...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGGCTTCTTCAGCATCCTaGCCCCCACCGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQASSAS*PPPGRA
Trigger: TGCCCTCCCCGGTGGGGGCCAGGATGCTGAAGAAGC...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCATCAGCAGCGGATAGGTaGCCCGAAAGTACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPSAADR*PESTRR
Trigger: TCTTCGAGTACTTTCGGGCCACCTATCCGCTGCTGA...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAGCTCCTTCCGGTCATTaGTCCTCACTTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGAPSGH*SSLSPP
Trigger: AGGTGGAGAAAGTGAGGACCAATGACCGGAAGGAGC...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTGCTCCTTCCGGTCATTaGTCCTCACTTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPAPSGH*SSLSPP
Trigger: AGGTGGAGAAAGTGAGGACCAATGACCGGAAGGAGC...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACGCCCTCCCACGTCAGTaGGGGCGCCAGGTGGACACG +
Preference number: 4 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHALPRQ*GRQVDT
Trigger: CGTGTCCACCTGGCGCCCCCACTGACGTGGGAGGGC...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAACAGGGAGAAGGGGTCTaGTCAAGAGAGCGAACGTTG +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQEQGEGV*SRERTL
Trigger: CAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTG...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGGGCTCGTGCCCTGGCTaGAAGAGCCAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQGSCPG*KSQVRE
Trigger: CTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCC...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGAGGCTGGGCAGCACTaGGCCAGAGGCGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RFTLPTICESEIQAALGWEAGQH*ARGVLV
Trigger: GACCAGGACGCCTCTGGCCCAGTGCTGCCCAGCCTC...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TTTCCATCTGGCATTTCCACTTGCTTTGGTATCCACAGGCGCTTCCGGGCCCGGCCCCTGGGCTGTCCCTaGCTCTTCCCTCCCACTCAT +
Preference number: 4 (lower is better)
Translates to: FPSGISTCFGIHRRFRARPLGCP*LFPPTH
Trigger: ATGAGTGGGAGGGAAGAGCCAGGGACAGCCCAGGGG...CCGGGCCCGGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGATGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCCTGGCCCCCATCCCCTaGGCTGTCCCTGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLLAPIP*AVPGSS
Trigger: GGAAGAGCCAGGGACAGCCCAGGGGATGGGGGCCAG...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCAACAGGCACTCTCACTaGGGTTGCGTTTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGNRHSH*GCVWES
Trigger: GGACTCCCAAACGCAACCCCAGTGAGAGTGCCTGTT...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTTATGCGCATGGAGCGTaGCGGCCAAACTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: IDLSFPSGAGIQASCSATYAHGA*RPNSSW
Trigger: CCAGGAGGAGTTTGGCCGCCACGCTCCATGCGCATA...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCCGGGGCTTTTCCATCTaGCATTTCCACTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRARGFSI*HFHLLW
Trigger: CCAAAGCAAGTGGAAATGCCAGATGGAAAAGCCCCG...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCAGAAGGCAGTCTGTCCTaGAGACAGAGTGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPEGSLS*RQSEQE
Trigger: TTCCTGCTCACTCTGTCTCCAGGACAGACTGCCTTC...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCATGTGAGGAAGACGTCTaGAAGGATACACCACCCACG +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPCEEDV*KDTPPT
Trigger: CGTGGGTGGTGTATCCTTCCAGACGTCTTCCTCACA...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGAGGTGGGAGAACAGATaGAGGCTGAAGGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRRWENR*RLKDLW
Trigger: CCAGAGGTCCTTCAGCCTCCATCTGTTCTCCCACCT...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGACAGAATGTGGGTAGGTaGGAGAACAGATGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGQNVGR*ENRWRL
Trigger: CAGCCTCCATCTGTTCTCCCACCTACCCACATTCTG...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGTTGTGTTAGATGCTaGCCAGGGATGTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRGCVRC*PGMSSR
Trigger: CCGTGAGGACATCCCTGGCCAGCATCTAACACAACC...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCATTTCTGTGTTAACCTaGTTCCCGCCCGCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVISVLT*FPPAPS
Trigger: AGACGGGGCGGGCGGGAACCAGGTTAACACAGAAAT...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393340.7
CDS-3UTR TCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGGAATCACTTCCCGGGTaGGGCTGGCGGGGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWESLPG*GWRGRH
Trigger: ATGGCGACCCCGCCAGCCTCACCCGGGAAGTGATTC...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTCCTTGGCGAAAGCCTTaGAGCTGTCCCTGCCCGTAT +
Preference number: 4 (lower is better)
Translates to: IDLSFPSGAGIQASCSATPWRKP*SCPCPY
Trigger: ATACGGGCAGGGACAGCTTCAAGGCTTTCGCCAAGG...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGCCCGGAACTGGAAGGTaGCAATACCCCGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GVWSRERTLPNSLHMLQEPGTGR*QYPGSQ
Trigger: CTGGCTACCGGGGTATTGTCACCTTCCAGTTCCGGG...CTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGCCTCAACCATCTGTGTaGCCTTGGGCAACTTCACCT +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRPQPSV*PWATSP
Trigger: AGGTGAAGTTGCCCAAGGTCACACAGATGGTTGAGG...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCAAGGAGCCTGGGCCCTaGCGGTGGAGGAACCCCCAC +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASKEPGP*RWRNPH
Trigger: GTGGGGGTTCCTCCACCGTCAGGGCCCAGGCTCCTT...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCATTGTTCCATAAAGAATaGGGCTTGCCCTCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPLFHKE*GLPSLP
Trigger: GGGAAGGGAGGGCAAGCCTCATTCTTTATGGAACAA...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTGCAGGGCTGCTGCACTaGGGGTGCATCCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIAGLLH*GCIPPP
Trigger: AGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGC...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCGCAGGGCTGCTGCACTaGGGGTGCATCCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLAGLLH*GCIPPP
Trigger: AGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGC...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTAGGGAAGGCCCTCGGTaGAGAGTGAGGCCTGATCGC +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTREGPR*RVRPDR
Trigger: GCGATCAGGCCTCACTCTTCACCGAGGGCCTTCCCT...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGTCAGATGTCTTCCATaGACTCCCTGGAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRVRCLP*TPWSSR
Trigger: CCTTGAGCTCCAGGGAGTTCATGGAAGACATCTGAC...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCAGGAAGTTATCCACTGTaGGAACTGGCCCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPGSYPL*ELAHLS
Trigger: AGACAGATGGGCCAGTTCTCACAGTGGATAACTTCC...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333055.8
CDS-3UTR TCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAGGAAGTTATCCACTGTaGGAACTGGCCCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGGSYPL*ELAHLS
Trigger: AGACAGATGGGCCAGTTCTCACAGTGGATAACTTCC...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCAAAGCTCAGAGTCTGGTaGTGGACAGATCCCAGATAC +
Preference number: 4 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPKLRVW*WTDPRY
Trigger: GTATCTGGGATCTGTCCATCACCAGACTCTGAGCTT...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333055.8
CDS-3UTR GCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTGGGACGGTTCAAGGCTaGCCTGGGCTTGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPGTVQG*PGLARL
Trigger: GAGCCGGGCAAGCCCAGGGCAGCCTTGAACCGTCCC...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTGGGCCGTCTCCTCGTaGCCGCAGTCCTGGCTAACG +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGAWAVSS*PQSWLT
Trigger: CGTTAGCCAGGACTGCGGGCACGAGGAGACGGCCCA...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATGGGCCGTCTCCTCGTaGCCGCAGTCCTGGCTAACG +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTWAVSS*PQSWLT
Trigger: CGTTAGCCAGGACTGCGGGCACGAGGAGACGGCCCA...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGTGGGCCGTCTCCTCGTaGCCGCAGTCCTGGCTAACG +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWWAVSS*PQSWLT
Trigger: CGTTAGCCAGGACTGCGGGCACGAGGAGACGGCCCA...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGCTGCTCAGGTCGGGCTaGCGGATGTGCGTGACCGCG +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWLLRSG*RMCVTA
Trigger: CGCGGTCACGCACATCCGGCAGCCCGACCTGAGCAG...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCGCGGCACCGCAATGCTaGTCAGGTCGGGCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASAAPQC*SGRAAG
Trigger: TCCGGCAGCCCGACCTGAGCAGCATTGCGGTGCCGC...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACAAGATCTCAGGGCGTATaGAGGCCCGCCCCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTRSQGV*RPAPAA
Trigger: AGCGGCAGGGGCGGGCCTGCATACGCCCTGAGATCT...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAATCCAGCTGGGTGAAGTaGACAAACTGCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQESSWVK*TNCWFS
Trigger: GCTGAACCAGCAGTTTGTGCACTTCACCCAGCTGGA...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATCCCTGCCCGTATACTaGACCCGCACCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTSLPVY*TRTSPS
Trigger: GCTGGGGGAGGTGCGGGTGCAGTATACGGGCAGGGA...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCACAAACTCTCTGCACATaGTCCAGGAGAAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPQTLCT*SRRKLR
Trigger: CCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTG...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTCAAACTCTCTGCACATaGTCCAGGAGAAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPQTLCT*SRRKLR
Trigger: CCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTG...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCACAAGAGAGCGAACGTTaGCAAACTCTCTGCACATGC +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPQESER*QTLCTC
Trigger: GCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTG...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCGCTGAGGAGAGGTCTTaGTTGCCCCCTTCAACTTTC +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVAEERS*LPPSTF
Trigger: GAAAGTTGAAGGGGGCAAGCAAGACCTCTCCTCAGC...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGAAGTCCTCTCCATCCTaGCATGGCGTCCTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PERAQCSYRRADSTSEITKSSPS*HGVLAC
Trigger: ACAGGCCAGGACGCCATGGCAGGATGGAGAGGACTT...CGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGCACTCAATAAGCACTaGCTGGGCCAGCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PERAQCSYRRADSTSEITALNKH*LGQQRA
Trigger: TGCCCTCTGCTGGCCCAGGCAGTGCTTATTGAGTGC...CGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGCACTCTCACTGGGGTTaGGTTTGGGAGTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: PERAQCSYRRADSTSEITHSHWG*VWESKR
Trigger: GCGCTTGGACTCCCAAACGCAACCCCAGTGAGAGTG...CGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGGCGATCTCAGGTCACTaGAACCACCCCGTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQAISGH*NHPVPG
Trigger: ACCCGGGACGGGGTGGTTGCAGTGACCTGAGATCGC...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGTTGAGGAGGGAAGGCTaGCCGGAAGGCAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: GVWSRERTLPNSLHMLQELRREG*PEGSLS
Trigger: GGACAGACTGCCTTCCGGGCAGCCTTCCCTCCTCAA...CTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCATAAAGAATGAGGCTTaGCCTCCCTTCCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSIKNEA*PPFPSP
Trigger: AGGAGAGGGGAAGGGAGGGCAAGCCTCATTCTTTAT...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTGTGCATCCCACCTCCTaGAGGGAAGGCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPVHPTS*REGSQT
Trigger: GGTCTGGCTGCCTTCCCTGCAGGAGGTGGGATGCAC...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGGGCACCCTCCCCCGCTaGCTCGACAGGGCATCCCCG +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLGTLPR*LDRASP
Trigger: CGGGGATGCCCTGTCGAGCCAGCGGGGGAGGGTGCC...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp CCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGTCGTGCCCGCAGTCCTaGCTAACGATGATGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PERAQCSYRRADSTSEITSCPQS*LTMMGK
Trigger: CTTCCCCATCATCGTTAGCCAGGACTGCGGGCACGA...CGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCCCCTGGAACTTGCGGTaGTCCGGCGGCACCGCAATG +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLPWNLR*SGGTAM
Trigger: CATTGCGGTGCCGCCGGACCACCGCAAGTTCCAGGG...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAATCAGCAGCGGATAGGTaGCCCGAAAGTACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQESAADR*PESTRR
Trigger: TCTTCGAGTACTTTCGGGCCACCTATCCGCTGCTGA...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTGCAGCTCAGGCCTGCTaGCGTCCACCATCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTAAQAC*RPPSAP
Trigger: AGGAGCAGATGGTGGACGCCAGCAGGCCTGAGCTGC...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCATAAACTTGAGGTGCTaGTCAAAGAACTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLINLRC*SKNCPW
Trigger: CCACGGGCAGTTCTTTGACCAGCACCTCAAGTTTAT...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACACGGCGGCCCCGGAACTaGAAGGTGACAATACCCCGG +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTRRPRN*KVTIPR
Trigger: CCGGGGTATTGTCACCTTCCAGTTCCGGGGCCGCCG...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTGGCTCGTGCCCTGGCTaGAAGAGCCAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIGSCPG*KSQVRE
Trigger: CTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCC...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCGGAGGGCTCGTGCCCTaGCTGGAAGAGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLGGLVP*LEEPGQ
Trigger: CTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCC...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTGGGCCAGAGGCGTCCTaGTCACTGCTCCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIGPEAS*SLLHLV
Trigger: GACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCC...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTGAGGCTGGGCAGCACTaGGCCAGAGGCGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPEAGQH*ARGVLV
Trigger: GACCAGGACGCCTCTGGCCCAGTGCTGCCCAGCCTC...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCCAGGCTGGAGTGCAGTaGTATGATCTTGGATTACTG +
Preference number: 4 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRAQAGVQ*YDLGLL
Trigger: CAGTAATCCAAGATCATACCACTGCACTCCAGCCTG...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGTCCCGCCATCTCTCCTaGACCTCCCCGAGCCACGCA +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWSRHLS*TSPSHA
Trigger: TGCGTGGCTCGGGGAGGTCCAGGAGAGATGGCGGGA...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCCGGGGCTTTTCCATCTaGCATTTCCACTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSRGFSI*HFHLLW
Trigger: CCAAAGCAAGTGGAAATGCCAGATGGAAAAGCCCCG...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCGACATTTGTCTCCACTaGGGGCGACTTGATCCACAA +
Preference number: 4 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSDICLH*GRLDPQ
Trigger: TTGTGGATCAAGTCGCCCCCAGTGGAGACAAATGTC...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACACCACATTCCAGTGAGTaGAACGTGAGGGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTPHSSE*NVREGC
Trigger: ACAGCCTTCCCTCACGTTCCACTCACTGGAATGTGG...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TTTCCATCTGGCATTTCCACTTGCTTTGGTATCCACAGGCGCTTCCGGGCCCGGGTGCTGAGACGTTTTTaGCTGGGGCAGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FPSGISTCFGIHRRFRARVLRRF*LGQGCC
Trigger: GCAGCAGCCCTGCCCCAGCCAAAAACGTCTCAGCAC...CCGGGCCCGGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGATGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGTCCAAAGGAGGCTTTTaGCAGGCTTGCCTCATTGCC +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRSKGGF*QACLIA
Trigger: GGCAATGAGGCAAGCCTGCCAAAAGCCTCCTTTGGA...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCTCCAAAGGAGGCTTTTaGCAGGCTTGCCTCATTGCC +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGSKGGF*QACLIA
Trigger: GGCAATGAGGCAAGCCTGCCAAAAGCCTCCTTTGGA...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAATCCACTGTGAGAACTaGCCCATCTGTCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPIHCEN*PICLVL
Trigger: CAGCACAAGACAGATGGGCCAGTTCTCACAGTGGAT...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACATCGAGAGCGCTGACTaGGGGTGGCCTGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHIESAD*GWPARC
Trigger: GCACCTGGCAGGCCACCCTCAGTCAGCGCTCTCGAT...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCAAAGGTCATCGTTCTTaGGATCTCAGGGCGTATGCA +
Preference number: 4 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSKGHRS*DLRAYA
Trigger: TGCATACGCCCTGAGATCTCAAGAACGATGACCTTT...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAAAAGGTCATCGTTCTTaGGATCTCAGGGCGTATGCA +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGKGHRS*DLRAYA
Trigger: TGCATACGCCCTGAGATCTCAAGAACGATGACCTTT...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCCACCTCAGCTCATaGTGTGGCAAGGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGASHLSS*CGKEGP
Trigger: GGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGA...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCGGCAGTGAGCCCCGATaGCCCACCAACTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASGSEPR*PTNSTR
Trigger: CCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGCC...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTGGCAGTGAGCCCCGATaGCCCACCAACTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPGSEPR*PTNSTR
Trigger: CCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGCC...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCCAGCTGGGCATGGGCTaGGGAGAGGTCTTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGAQLGMG*GEVLLA
Trigger: GGCAAGCAAGACCTCTCCTCAGCCCATGCCCAGCTG...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTGGCATAGTCCCTCTCTaGGGTAAGGCAAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: IDLSFPSGAGIQASCSATGIVPL*GKARER
Trigger: CCTCTCTCTTGCCTTACCTCAGAGAGGGACTATGCC...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTCCAGCCTCAGCTTCCTaGGTAGCTGGGATTACAGGT +
Preference number: 4 (lower is better)
Translates to: IDLSFPSGAGIQASCSATPASAS*VAGITG
Trigger: ACCTGTAATCCCAGCTACTCAGGAAGCTGAGGCTGG...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGCGCCTAGGCTTGCTCTaGGGATCAAGTAAGTTGGTA +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRRLGLL*GSSKLV
Trigger: TACCAACTTACTTGATCCTCAGAGCAAGCCTAGGCG...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACATTCCTAAACTCCCTGTaGATTGCCAGGGGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTFLNSL*IARGQN
Trigger: ATTCTGGCCCCTGGCAATTCACAGGGAGTTTAGGAA...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGAGGGAAGGCCCTCGGTaGAGAGTGAGGCCTGATCGC +
Preference number: 4 (lower is better)
Translates to: RFTLPTICESEIQAALGWREGPR*RVRPDR
Trigger: GCGATCAGGCCTCACTCTTCACCGAGGGCCTTCCCT...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCTTGTGCTGGGGCTCATaGGAAGAAACAGGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGLCWGS*EETGLR
Trigger: TCTAAGGCCTGTTTCTTCTCATGAGCCCCAGCACAA...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCGGAAGTTATCCACTGTaGGAACTGGCCCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGGSYPL*ELAHLS
Trigger: AGACAGATGGGCCAGTTCTCACAGTGGATAACTTCC...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCAAGCTCAGAGTCTGGTaGTGGACAGATCCCAGATAC +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVKLRVW*WTDPRY
Trigger: GTATCTGGGATCTGTCCATCACCAGACTCTGAGCTT...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGAGTAGCCCTGGAACTTaGGGTGGTCCGGCGGCACCG +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWSSPGT*GGPAAP
Trigger: CGGTGCCGCCGGACCACCGCAAGTTCCAGGGCTACT...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTGCGGGGAAGCGAAACTaGCGGAAGACCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPAGKRN*RKTWPS
Trigger: GCTGGGCCAGGTCTTCCGGCAGTTTCGCTTCCCCGC...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp TTTCCATCTGGCATTTCCACTTGCTTTGGTATCCACAGGCGCTTCCGGGCCCGGCAGGGAAAAAGTCGGTaGGGTAGAGCAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: FPSGISTCFGIHRRFRARQGKSR*GRAAQA
Trigger: GGCCTGAGCTGCTCTACCGCACCGACTTTTTCCCTG...CCGGGCCCGGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGATGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGCGTGGCTCACACCCTTaGGGCCAAAGGTCATCGTTC +
Preference number: 4 (lower is better)
Translates to: GVWSRERTLPNSLHMLQERGSHP*GQRSSF
Trigger: GAACGATGACCTTTGGCCGCAAGGGTGTGAGCCACG...CTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGTCCCTGCCCGTATACTaGACCCGCACCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWSLPVY*TRTSPS
Trigger: GCTGGGGGAGGTGCGGGTGCAGTATACGGGCAGGGA...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAACAAGAGAGCGAACGTTaGCAAACTCTCTGCACATGC +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQEQESER*QTLCTC
Trigger: GCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTG...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGAGGAGAGGTCTTGCTTaGCCCCTTCAACTTTCCATC +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRRRGLA*PLQLSI
Trigger: GATGGAAAGTTGAAGGGGGCAAGCAAGACCTCTCCT...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTAGGCGTCCTGGTCACTaGTCCACCTGGTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTRRPGH*STWSLL
Trigger: GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCT...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTGAAGACTCAGCCCCCTaGCACAGTAGGACAGGTTTC +
Preference number: 4 (lower is better)
Translates to: IDLSFPSGAGIQASCSATEDSAP*HSRTGF
Trigger: GAAACCTGTCCTACTGTGGCAGGGGGCTGAGTCTTC...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTAACCAGGGCAGCATTTaGTGTGAGCTGGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: IDLSFPSGAGIQASCSATNQGSI*CELGAM
Trigger: CATGGCTCCCAGCTCACAGCAAATGCTGCCCTGGTT...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCAGGCTGTCTGCCCACTaGTTTTGTTCCATAAAGAAT +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLRLSAH*FCSIKN
Trigger: ATTCTTTATGGAACAAAAGCAGTGGGCAGACAGCCT...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCGTGCATCCCACCTCCTaGAGGGAAGGCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLVHPTS*REGSQT
Trigger: GGTCTGGCTGCCTTCCCTGCAGGAGGTGGGATGCAC...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGACAGCCCCATTCCGCTaGCAGCGTCCTGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQTAPFR*QRPAGP
Trigger: GGGGCCTGCAGGACGCTGGCAGCGGAATGGGGCTGT...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCATTAGGAGGCAGCCATaGACCTTTCTTCTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLIRRQP*TFLLLS
Trigger: AGACAAGAGAAGAAAGGTGCATGGCTGCCTCCTAAT...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTTCCACCTCGGCGTCTTaGGCCAGGCGAATCACTTCC +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTSTSAS*ARRITS
Trigger: GGAAGTGATTCGCCTGGCCCAAGACGCCGAGGTGGA...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACTGCCGTAGGAGGCGATaGCCTGGGCCGTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHCRRRR*PGPSPR
Trigger: ACGAGGAGACGGCCCAGGCCATCGCCTCCTACGGCA...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAATAAACTTGAGGTGCTaGTCAAAGAACTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGINLRC*SKNCPW
Trigger: CCACGGGCAGTTCTTTGACCAGCACCTCAAGTTTAT...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCCGGCGGCCCCGGAACTaGAAGGTGACAATACCCCGG +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASRRPRN*KVTIPR
Trigger: CCGGGGTATTGTCACCTTCCAGTTCCGGGGCCGCCG...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGCCTCAGCTCATGATGTaGCAAGGAGGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GVWSRERTLPNSLHMLQEPQLMM*QGGAQE
Trigger: TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGG...CTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACGGCTCGTGCCCTGGCTaGAAGAGCCAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHGSCPG*KSQVRE
Trigger: CTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCC...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTGGCTCGTGCCCTGGCTaGAAGAGCCAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPGSCPG*KSQVRE
Trigger: CTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCC...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTGAGACCGCCGGTGCCTaGCCTGAGAATCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPETAGA*PENPSA
Trigger: TGCACTTGGATTCTCAGGCCAGGCACCGGCGGTCTC...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCCTGCAAACTCGAGGCTaGCTGAACTCTACAGCATTG +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVLQTRG*LNSTAL
Trigger: CAATGCTGTAGAGTTCAGCCAGCCTCGAGTTTGCAG...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCTCACTGTCACAAGCTTaGTCTTCCAGGCACCGTGTA +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVSLSQA*SSRHRV
Trigger: TACACGGTGCCTGGAAGACCAAGCTTGTGACAGTGA...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGACAGGTCCAGCTGGGTaGAGTGCACAAACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GVWSRERTLPNSLHMLQETGPAG*SAQTAG
Trigger: ACCAGCAGTTTGTGCACTTCACCCAGCTGGACCTGT...CTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGGGCAGTGAGCCCCGATaGCCCACCAACTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQGSEPR*PTNSTR
Trigger: CCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGCC...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGATCAGCTGTGTACCCTaGGGCTCCCCGGCACGTCAT +
Preference number: 4 (lower is better)
Translates to: RFTLPTICESEIQAALGWISCVP*GSPARH
Trigger: ATGACGTGCCGGGGAGCCTCAGGGTACACAGCTGAT...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGGAACTCCTGACTTCGTaGTCCGTCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWELLTS*SVRLSL
Trigger: GAGGCTGAGGCGGACGGATCACGAAGTCAGGAGTTC...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AGCCTGGGCCCTGACGGTGGAGGAACCCCCACACCAGCCTGCACCATCGACCTCTCTCATCAGAAAGCCTaGAATCCCACGTTAGATATT +
Preference number: 4 (lower is better)
Translates to: SLGPDGGGTPTPACTIDLSHQKA*NPTLDI
Trigger: AATATCTAACGTGGGATTTCAGGCTTTCTGATGAGA...GAGGTCGATGGTGCAGGCTGGTGTGGGGGTTCCTCCACCGTCAGGGCCCAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGAGAACAGATGGAGGCTaGAGGACCTCTGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: RKGHNAAIAGPIPRLKSRRTDGG*RTSGGK
Trigger: TTTGCCACCAGAGGTCCTTCAGCCTCCATCTGTTCT...CCGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGTTCCTGCTCTGCAACTaGATCCATTCTGACACACTG +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRFLLCN*IHSDTL
Trigger: CAGTGTGTCAGAATGGATTCAGTTGCAGAGCAGGAA...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp TTTCCATCTGGCATTTCCACTTGCTTTGGTATCCACAGGCGCTTCCGGGCCCGGTCCAGCCTCTTTTGCTaGCAGGGGTGCCTGTGTGAT +
Preference number: 4 (lower is better)
Translates to: FPSGISTCFGIHRRFRARSSLFC*QGCLCD
Trigger: ATCACACAGGCACCCCTGTCAGCAAAAGAGGCTGGA...CCGGGCCCGGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGATGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTCTGGGAGCCATGTGTTaGAGACGGCGGAACAACAAA +
Preference number: 4 (lower is better)
Translates to: IDLSFPSGAGIQASCSATLGAMC*RRRNNK
Trigger: TTTGTTGTTCCGCCGTCTTCAACACATGGCTCCCAG...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTCCAGTGAGTGGAACGTaGGGGAAGGCTGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIPVSGT*GKAVCP
Trigger: TGGGCAGACAGCCTTCCCTCACGTTCCACTCACTGG...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGGACGGTGGCCATGGGTaGCGGTGGCCGTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRDGGHG*RWPWAT
Trigger: AGTGGCCCACGGCCACCGTCACCCATGGCCACCGTC...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCTCCAAAGTCCATGGCTaGGCTGACCCTGACGGGGAG +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLSKVHG*ADPDGE
Trigger: CTCCCCGTCAGGGTCAGCTCAGCCATGGACTTTGGA...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTCCAAAGTCCATGGCTaGGCTGACCCTGACGGGGAG +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIISKVHG*ADPDGE
Trigger: CTCCCCGTCAGGGTCAGCTCAGCCATGGACTTTGGA...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGATTAGGAGGCAGCCATaGACCAGGTCCTCCCGACGT +
Preference number: 4 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQIRRQP*TRSSRR
Trigger: ACGTCGGGAGGACCTGGTGCATGGCTGCCTCCTAAT...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307826.5
CDS-3UTR GCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGGGGACGGTTCAAGGCTaGCCTGGGCTTGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLGTVQG*PGLARL
Trigger: GAGCCGGGCAAGCCCAGGGCAGCCTTGAACCGTCCC...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGCCGGCGGCACCGCAATaGTGCTCAGGTCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLPAAPQ*CSGRAA
Trigger: GGCAGCCCGACCTGAGCAGCATTGCGGTGCCGCCGG...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTAGAGCAGCTCAGGCCTaGTGGCGTCCACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIRAAQA*WRPPSA
Trigger: AGCAGATGGTGGACGCCAGCAGGCCTGAGCTGCTCT...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGAGCAGCTCAGGCCTaGTGGCGTCCACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLRAAQA*WRPPSA
Trigger: AGCAGATGGTGGACGCCAGCAGGCCTGAGCTGCTCT...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGAGAGCAGCTCAGGCCTaGTGGCGTCCACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWRAAQA*WRPPSA
Trigger: AGCAGATGGTGGACGCCAGCAGGCCTGAGCTGCTCT...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGAGATCTCAGGGCGTATaGAGGCCCGCCCCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQRSQGV*RPAPAA
Trigger: AGCGGCAGGGGCGGGCCTGCATACGCCCTGAGATCT...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGCCCCAACAAGCCCAGTaGCCCCCACCACACAGTGGT +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWPQQAQ*PPPHSG
Trigger: ACCACTGTGTGGTGGGGGGCACTGGGCTTGTTGGGG...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGATGGGAGGTTGGAGCTaGTCCCAAGGCCACGGCCCT +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWMGGWS*SQGHGP
Trigger: AGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCAT...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTCCGGAAAGGGCACAATaGAGCTATCGCCGGGCCGAT +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIPERAQ*SYRRAD
Trigger: ATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGCTGCATGACATGCTATaGGCATGGAGCGTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RFTLPTICESEIQAALGWLHDML*AWSVAA
Trigger: GGCCGCCACGCTCCATGCGCATAGCATGTCATGCAG...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGTGGCTGGGGCAGGGCTaGTGCACTGAGGGTGCATCC +
Preference number: 4 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQWLGQG*CTEGAS
Trigger: GGATGCACCCTCAGTGCAGCAGCCCTGCCCCAGCCA...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGACAGCCCCATTCCGCTaGCAGCGTCCTGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLTAPFR*QRPAGP
Trigger: GGGGCCTGCAGGACGCTGGCAGCGGAATGGGGCTGT...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCACTGCAGACTTCAGTaGCCCTCTCAGGGGTCCGTT +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTHCRLQ*PSQGSV
Trigger: AACGGACCCCTGAGAGGGGCACTGAAGTCTGCAGTG...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCTCAGATCCACCAAAGTaGAGCTTCTCTCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLSDPPK*SFSLLI
Trigger: GATAAGAAGAGAGAAGCTGCACTTTGGTGGATCTGA...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAATTAGGAGGCAGCCATaGACCTTTCTTCTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGIRRQP*TFLLLS
Trigger: AGACAAGAGAAGAAAGGTGCATGGCTGCCTCCTAAT...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTTCGTGCCCGCAGTCCTaGCTAACGATGATGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTSCPQS*LTMMGK
Trigger: CTTCCCCATCATCGTTAGCCAGGACTGCGGGCACGA...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCAGGCCTTTGGCCACTTaGGCTCCAGCTCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGARPLAT*APAQPR
Trigger: TCTGGGCTGAGCTGGAGCCCAAGTGGCCAAAGGCCT...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGTGGGGGCGCCAGGTaGACACGGCGGCCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCSGGAR*TRRPRN
Trigger: GTTCCGGGGCCGCCGTGTCCACCTGGCGCCCCCACT...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCTCAATAAGCACTGCCTaGGCCAGCAGAGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLSISTA*ASRGHR
Trigger: CCGGTGCCCTCTGCTGGCCCAGGCAGTGCTTATTGA...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCAATAAGCACTGCCTaGGCCAGCAGAGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGASISTA*ASRGHR
Trigger: CCGGTGCCCTCTGCTGGCCCAGGCAGTGCTTATTGA...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTGTTTCTGAGCCCAGATaGGAGGTTGGAGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPVSEPR*EVGAAP
Trigger: GGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAAC...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTAGAGGCCGTAAAGGCTaGAATGGAACAGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: IDLSFPSGAGIQASCSATRGRKG*NGTVQP
Trigger: AGGCTGGACTGTTCCATTCCAGCCTTTACGGCCTCT...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTGGCTCAGGAGGGCCTTaGCCAGACTCCATCAGACAT +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTGSGGP*PDSIRH
Trigger: ATGTCTGATGGAGTCTGGCCAAGGCCCTCCTGAGCC...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACACATCGGCCACCAGGCTaGTCTCCAGGAAATAGGGCC +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTHRPPG*SPGNRA
Trigger: GGCCCTATTTCCTGGAGACCAGCCTGGTGGCCGATG...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTGGCAGGAAGAACAGCTaGACCCGAGTCAGACACGCA +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTGRKNS*TRVRHA
Trigger: TGCGTGTCTGACTCGGGTCCAGCTGTTCTTCCTGCC...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAAAGAAAACTGCATCACTaGCATGTGCCCTTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQERKLHH*HVPLSV
Trigger: GACTGACAAGGGCACATGCCAGTGATGCAGTTTTCT...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TTTCCATCTGGCATTTCCACTTGCTTTGGTATCCACAGGCGCTTCCGGGCCCGGGGTTGTGTTAGATGCTaGCCAGGGATGTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: FPSGISTCFGIHRRFRARGCVRC*PGMSSR
Trigger: CCGTGAGGACATCCCTGGCCAGCATCTAACACAACC...CCGGGCCCGGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGATGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTGCGGTCACAGGCGATaGCCAGGATGGGAATCACCG +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASCGHRR*PGWESP
Trigger: CGGTGATTCCCATCCTGGTCATCGCCTGTGACCGCA...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGCCCGGAACTGGAAGGTaGCAATACCCCGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWPGTGR*QYPGSQ
Trigger: CTGGCTACCGGGGTATTGTCACCTTCCAGTTCCGGG...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGAACTCCACCAGGCCCTaGCAAGGAAGCCCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: RFTLPTICESEIQAALGWNSTRP*QGSPFG
Trigger: ACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTT...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACAAACTCCACCAGGCCCTaGCAAGGAAGCCCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTNSTRP*QGSPFG
Trigger: ACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTT...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCTTTCAAACCCACTCATaGAATCAAGTTCGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLFQTHS*NQVRES
Trigger: TGACTCACGAACTTGATTTCATGAGTGGGTTTGAAA...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACCCTCTTGGCCTGCTCTaGGGGCTTCGTCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHPLGLL*GLRLRF
Trigger: GAAACGGAGACGAAGCCCTCAGAGCAGGCCAAGAGG...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGCTGGTGGCAAAACACTaGCCTCTACAGAGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: PERAQCSYRRADSTSEITLVAKH*PLQRSH
Trigger: ATGAGACCTCTGTAGAGGTCAGTGTTTTGCCACCAG...CGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTCTCACGTGTCCAAAGTaGAATTTGCAGTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IDLSFPSGAGIQASCSATLTCPK*NLQCSS
Trigger: GGAGGAGCACTGCAAATTTCACTTTGGACACGTGAG...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333055.8
CDS-3UTR GCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGGGGACGGTTCAAGGCTaGCCTGGGCTTGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRGTVQG*PGLARL
Trigger: GAGCCGGGCAAGCCCAGGGCAGCCTTGAACCGTCCC...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGGGGTGGCCTGCCAGGTaGTGGGCGCGTCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLGWPAR*WARPEE
Trigger: TTCTTCTGGACGCGCCCAGCACCTGGCAGGCCACCC...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGGCGGCACCGCAATGCTaGTCAGGTCGGGCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRAAPQC*SGRAAG
Trigger: TCCGGCAGCCCGACCTGAGCAGCATTGCGGTGCCGC...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGAGTAGCCCTGGAACTTaGGGTGGTCCGGCGGCACCG +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLSSPGT*GGPAAP
Trigger: CGGTGCCGCCGGACCACCGCAAGTTCCAGGGCTACT...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGCCACCATCTGCTCCTTaGCGTTGTCATTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: RFTLPTICESEIQAALGWPPSAP*RCHSRP
Trigger: CGGCCTGGAATGACAACGGCAAGGAGCAGATGGTGG...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCCAGGGAAAAAGTCGGTaGGGTAGAGCAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGAQGKSR*GRAAQA
Trigger: GGCCTGAGCTGCTCTACCGCACCGACTTTTTCCCTG...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGCGTGGCTCACACCCTTaGGGCCAAAGGTCATCGTTC +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWRGSHP*GQRSSF
Trigger: GAACGATGACCTTTGGCCGCAAGGGTGTGAGCCACG...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGTTGATAAACTTGAGGTaGTGGTCAAAGAACTGCCCG +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRLINLR*WSKNCP
Trigger: CGGGCAGTTCTTTGACCAGCACCTCAAGTTTATCAA...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGTCCCTGCCCGTATACTaGACCCGCACCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLSLPVY*TRTSPS
Trigger: GCTGGGGGAGGTGCGGGTGCAGTATACGGGCAGGGA...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGCACACAGTGGTTTCCTaGTTAATACCCCGCAACATA +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRHTVVS*LIPRNI
Trigger: TATGTTGCGGGGTATTAAGCAGGAAACCACTGTGTG...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGCAAACTCTCTGCACATaGTCCAGGAGAAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RKGHNAAIAGPIPRLKSRQTLCT*SRRKLR
Trigger: CCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTG...CCGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAATATAAACTGCTAGGCTaGAAGGAGAGAAGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQEYKLLG*KERRAK
Trigger: CTTAGCCCTTCTCTCCTTGCAGCCTAGCAGTTTATA...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGTATAAACTGCTAGGCTaGAAGGAGAGAAGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRYKLLG*KERRAK
Trigger: CTTAGCCCTTCTCTCCTTGCAGCCTAGCAGTTTATA...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACAGGCGTCCTGGTCACTaGTCCACCTGGTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHRRPGH*STWSLL
Trigger: GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCT...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGAAGTCCTCTCCATCCTaGCATGGCGTCCTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: RFTLPTICESEIQAALGWKSSPS*HGVLAC
Trigger: ACAGGCCAGGACGCCATGGCAGGATGGAGAGGACTT...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACATCCCTCCCACTCATCTaGTTTCTTTCCTCAACTTTG +
Preference number: 4 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTSLPLI*FLSSTL
Trigger: CAAAGTTGAGGAAAGAAAGCAGATGAGTGGGAGGGA...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCCCGGAAAGGGCACAATaGAGCTATCGCCGGGCCGAT +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASPERAQ*SYRRAD
Trigger: ATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGGGGATCCAGGCTTCCTaGTCTGCAACTGAATCCATT +
Preference number: 4 (lower is better)
Translates to: RKGHNAAIAGPIPRLKSRGIQAS*SATESI
Trigger: AATGGATTCAGTTGCAGAGCAGGAAGCCTGGATCCC...CCGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAATACTATCCCATCTCTTaGTCAGGCAGGGGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQEYYPIS*SGRGSY
Trigger: ATAACTTCCCCTGCCTGAGCAAGAGATGGGATAGTA...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCCACTGCAGACTTCAGTaGCCCTCTCAGGGGTCCGTT +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLHCRLQ*PSQGSV
Trigger: AACGGACCCCTGAGAGGGGCACTGAAGTCTGCAGTG...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCCACTGCAGACTTCAGTaGCCCTCTCAGGGGTCCGTT +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGAHCRLQ*PSQGSV
Trigger: AACGGACCCCTGAGAGGGGCACTGAAGTCTGCAGTG...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGATCAGATCCACCAAAGTaGAGCTTCTCTCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGSDPPK*SFSLLI
Trigger: GATAAGAAGAGAGAAGCTGCACTTTGGTGGATCTGA...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACAGGACGTGGACATTTCTaGCCCCAACAAGCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTGRGHF*PQQAQC
Trigger: GCACTGGGCTTGTTGGGGCCAGAAATGTCCACGTCC...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGGGAGGGCTCGTGCCCTaGCTGGAAGAGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLGGLVP*LEEPGQ
Trigger: CTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCC...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCACAAGGAAGCCCCTTTaGTTAGTATCATTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSTRKPL*LVSFWP
Trigger: TGGCCAAAATGATACTAACCAAAGGGGCTTCCTTGT...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCGACATGCTATGCGCATaGAGCGTGGCGGCCAAACTC +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGADMLCA*SVAAKL
Trigger: GAGTTTGGCCGCCACGCTCCATGCGCATAGCATGTC...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTTGTAAGGGGGTCCTCTaGCACCGCAGGCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPCKGVL*HRRPQT
Trigger: AGTTTGGGGCCTGCGGTGCCAGAGGACCCCCTTACA...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTAGGTGGGAGAACAGATaGAGGCTGAAGGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTRWENR*RLKDLW
Trigger: CCAGAGGTCCTTCAGCCTCCATCTGTTCTCCCACCT...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGCATCGGCCACCAGGCTaGTCTCCAGGAAATAGGGCC +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWHRPPG*SPGNRA
Trigger: GGCCCTATTTCCTGGAGACCAGCCTGGTGGCCGATG...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACGTGCTGAGACGTTTTTaGCTGGGGCAGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHVLRRF*LGQGCC
Trigger: GCAGCAGCCCTGCCCCAGCCAAAAACGTCTCAGCAC...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTGCCTTAGAAGCGGCATaGCCCAGGAGGCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPALEAA*PRRQIS
Trigger: AGAAATCTGCCTCCTGGGCCATGCCGCTTCTAAGGC...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333055.8
3UTR CAA 72 bp GGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTaGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: GQGEGVWSRERT*PNSLHMLQEKA
Trigger: AGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGATCGAGAGCGCTGACTaGGGGTGGCCTGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRIESAD*GWPARC
Trigger: GCACCTGGCAGGCCACCCTCAGTCAGCGCTCTCGAT...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGGAATCACTTCCCGGGTaGGGCTGGCGGGGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLESLPG*GWRGRH
Trigger: ATGGCGACCCCGCCAGCCTCACCCGGGAAGTGATTC...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTAAAGGTCATCGTTCTTaGGATCTCAGGGCGTATGCA +
Preference number: 4 (lower is better)
Translates to: IDLSFPSGAGIQASCSATKGHRS*DLRAYA
Trigger: TGCATACGCCCTGAGATCTCAAGAACGATGACCTTT...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGCAACAGGGAGGGCACTaGTTTTCAGAAAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQQQGGH*FSERRG
Trigger: ACCCCTCCTTTCTGAAAATCAGTGCCCTCCCTGTTG...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCTGCTCCACCTCATGCTaGGAGGAGCCTGTGTGTCAA +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLCSTSC*EEPVCQ
Trigger: TTGACACACAGGCTCCTCTCAGCATGAGGTGGAGCA...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCCCTCCCGGGTTCAAGTaGTTCTCCAGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASPPGFK*FSSLSF
Trigger: GAAGCTGAGGCTGGAGAATCACTTGAACCCGGGAGG...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCATGAAATCAAGTTCGTaGGTCACAAAAAGCGTTTTG +
Preference number: 4 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRAMKSSS*VTKSVL
Trigger: CAAAACGCTTTTTGTGACTCACGAACTTGATTTCAT...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTCTGACACTGGTTTCTaGGCCCAGATGGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIISDTGF*AQMGGW
Trigger: CCAACCTCCCATCTGGGCTCAGAAACCAGTGTCAGA...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGTTCCTGCTCTGCAACTaGATCCATTCTGACACACTG +
Preference number: 4 (lower is better)
Translates to: RKGHNAAIAGPIPRLKSRFLLCN*IHSDTL
Trigger: CAGTGTGTCAGAATGGATTCAGTTGCAGAGCAGGAA...CCGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGCTGCTTCCTGGTAGCTaGACCAGGGCAGCATTTGCT +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWLLPGS*TRAAFA
Trigger: AGCAAATGCTGCCCTGGTTCAGCTACCAGGAAGCAG...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGACTCCATTTTCAAAACTaGGAATCCCAAATCAGATCC +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGLHFQN*ESQIRS
Trigger: GGATCTGATTTGGGATTCTCAGTTTTGAAAATGGAG...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGACAAGCCCTGCAGACTaGTTCTTCAGCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RFTLPTICESEIQAALGWTSPAD*FFSILA
Trigger: GGCCAGGATGCTGAAGAAGCAGTCTGCAGGGCTTGT...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGGGGTGGCCTGCCAGGTaGTGGGCGCGTCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRGWPAR*WARPEE
Trigger: TTCTTCTGGACGCGCCCAGCACCTGGCAGGCCACCC...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCCTGCTCAGGTCGGGCTaGCGGATGTGCGTGACCGCG +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCLLRSG*RMCVTA
Trigger: CGCGGTCACGCACATCCGGCAGCCCGACCTGAGCAG...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCCCACCATCTGCTCCTTaGCGTTGTCATTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASPPSAP*RCHSRP
Trigger: CGGCCTGGAATGACAACGGCAAGGAGCAGATGGTGG...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGCTGGCGTCCACCATCTaGTCCTTGCCGTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: RFTLPTICESEIQAALGWLASTI*SLPLSF
Trigger: GAATGACAACGGCAAGGAGCAGATGGTGGACGCCAG...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCCTGGCGTCCACCATCTaGTCCTTGCCGTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGALASTI*SLPLSF
Trigger: GAATGACAACGGCAAGGAGCAGATGGTGGACGCCAG...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACACTGGCGTCCACCATCTaGTCCTTGCCGTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTLASTI*SLPLSF
Trigger: GAATGACAACGGCAAGGAGCAGATGGTGGACGCCAG...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGTGCTGGTCAAAGAACTaGCCGTGGCTCACACCCTTG +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWCWSKN*PWLTPL
Trigger: CAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCA...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGTCCAGCTGGGTGAAGTaGACAAACTGCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQSSWVK*TNCWFS
Trigger: GCTGAACCAGCAGTTTGTGCACTTCACCCAGCTGGA...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGAGGCGTCCTGGTCACTaGTCCACCTGGTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQRRPGH*STWSLL
Trigger: GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCT...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACAGCTAGCTGCATGACATaGTATGCGCATGGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTASCMT*YAHGAW
Trigger: CCACGCTCCATGCGCATAGCATGTCATGCAGCTAGC...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGCCCCTTTCTATCAACTaGCCCCGCTCTGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLPLSIN*PRSARS
Trigger: GGAGCGGGCAGAGCGGGGGCAGTTGATAGAAAGGGG...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCAGAGGAGGAGGCAGCTaGCATCCACCCTTTACCTTC +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGARGGGS*HPPFTF
Trigger: GAAGGTAAAGGGTGGATGGCAGCTGCCTCCTCCTCT...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGCCTTGCAGGGAAGGCTaGCTGTCTCTAGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWPCREG*LSLAIF
Trigger: GAAGATGGCTAGAGACAGGCAGCCTTCCCTGCAAGG...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCGGCTTTTGGCAGGCTTaGCTCATTGCCCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASGFWQA*LIALAG
Trigger: CCCTGCAAGGGCAATGAGGCAAGCCTGCCAAAAGCC...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCTTCTCTTGTCTCAGTTaGTCTCCAGGAGATCATCAA +
Preference number: 4 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVFSCLS*SPGDHQ
Trigger: TTGATGATCTCCTGGAGAGCAACTGAGACAAGAGAA...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTAAGGCCCAAGTCCTaGTTGCAGCAGCCCCACAGT +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTLRPKS*LQQPHS
Trigger: ACTGTGGGGCTGCTGCAAGCAGGACTTGGGCCTTAA...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446023.6
CDS-3UTR CCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGTGCCGTAGGAGGCGATaGCCTGGGCCGTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRCRRRR*PGPSPR
Trigger: ACGAGGAGACGGCCCAGGCCATCGCCTCCTACGGCA...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGCAGGCCGATGCAGCCTaGGGACTGTGGTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRQADAA*GLWSHL
Trigger: GAGGTGGGACCACAGTCCCCAGGCTGCATCGGCCTG...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTCAGGGAGAAGGGGTCTaGTCAAGAGAGCGAACGTTG +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIQGEGV*SRERTL
Trigger: CAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTG...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCGAGGCTGGGCAGCACTaGGCCAGAGGCGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCEAGQH*ARGVLV
Trigger: GACCAGGACGCCTCTGGCCCAGTGCTGCCCAGCCTC...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCAGGAGTGGCAGGAGGTaGTCACAGCTGGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASRSGRR*SQLEAE
Trigger: TTCTGCCTCCAGCTGTGACCACCTCCTGCCACTCCT...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTGAAGGCAGTCTGTCCTaGAGACAGAGTGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTEGSLS*RQSEQE
Trigger: TTCCTGCTCACTCTGTCTCCAGGACAGACTGCCTTC...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTTGTGAGGAAGACGTCTaGAAGGATACACCACCCACG +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTCEEDV*KDTPPT
Trigger: CGTGGGTGGTGTATCCTTCCAGACGTCTTCCTCACA...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGCCAGGGGCCAGAATGTaGGTAGGTGGGAGAACAGAT +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWPGARM*VGGRTD
Trigger: ATCTGTTCTCCCACCTACCCACATTCTGGCCCCTGG...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCGGCAGGAAGAACAGCTaGACCCGAGTCAGACACGCA +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASGRKNS*TRVRHA
Trigger: TGCGTGTCTGACTCGGGTCCAGCTGTTCTTCCTGCC...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAACTGTCTTACAGTTCTaGTATAAAGGGTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGTVLQF*YKGSDF
Trigger: GAAGTCTGACCCTTTATACCAGAACTGTAAGACAGT...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TTTCCATCTGGCATTTCCACTTGCTTTGGTATCCACAGGCGCTTCCGGGCCCGGTCACTGTCACAAGCTTaGTCTTCCAGGCACCGTGTA +
Preference number: 4 (lower is better)
Translates to: FPSGISTCFGIHRRFRARSLSQA*SSRHRV
Trigger: TACACGGTGCCTGGAAGACCAAGCTTGTGACAGTGA...CCGGGCCCGGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGATGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGTTCCGGGGCTGTGTGTaGCCTTCAGGAATTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GVWSRERTLPNSLHMLQEFRGCV*PSGISV
Trigger: AACTGAAATTCCTGAAGGCCACACACAGCCCCGGAA...CTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCGCCTTAGAAGCGGCATaGCCCAGGAGGCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGAALEAA*PRRQIS
Trigger: AGAAATCTGCCTCCTGGGCCATGCCGCTTCTAAGGC...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR CAA 72 bp GTATTTCCAAAGGAGGCTTTTGGCAGGCTTGCCTCATaGCCCTTGCAGGGAAGGCTGCCTGTCTCTAGCCAT +
Preference number: 4 (lower is better)
Translates to: VFPKEAFGRLAS*PLQGRLPVSSH
Trigger: ATGGCTAGAGACAGGCAGCCTTCCCTGCAAGGGCAATGAGGCAAGCCTGCCAAAAGCCTCCTTTGGAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTACAGGTCCAGCTGGGTaGAGTGCACAAACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPTGPAG*SAQTAG
Trigger: ACCAGCAGTTTGTGCACTTCACCCAGCTGGACCTGT...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGCCCGGAACTGGAAGGTaGCAATACCCCGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLPGTGR*QYPGSQ
Trigger: CTGGCTACCGGGGTATTGTCACCTTCCAGTTCCGGG...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACACAACAGGGAGGGCACTaGTTTTCAGAAAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTQQGGH*FSERRG
Trigger: ACCCCTCCTTTCTGAAAATCAGTGCCCTCCCTGTTG...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTCAACAGGGAGGGCACTaGTTTTCAGAAAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIQQGGH*FSERRG
Trigger: ACCCCTCCTTTCTGAAAATCAGTGCCCTCCCTGTTG...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACAACTTGGCTAGCTGCATaGCATGCTATGCGCATGGAG +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTTWLAA*HAMRME
Trigger: CTCCATGCGCATAGCATGTCATGCAGCTAGCCAAGT...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGGACTTGATCCACAAATaGGATCCCACCAGTGACCCA +
Preference number: 4 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQDLIHK*DPTSDP
Trigger: TGGGTCACTGGTGGGATCTCATTTGTGGATCAAGTC...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTCCACTGGGGGCGACTTaGTCCACAAATGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPPLGAT*STNEIP
Trigger: TGGGATCTCATTTGTGGATCAAGTCGCCCCCAGTGG...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGTTCTTACAGCTGTGCTaGGACGTTTTTGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWFLQLC*DVFGWG
Trigger: GCCCCAGCCAAAAACGTCTCAGCACAGCTGTAAGAA...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCGCCCTCGGTGAAGAGTaGGGCCTGATCGCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCALGEE*GLIAAH
Trigger: GTGAGCGGCGATCAGGCCTCACTCTTCACCGAGGGC...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCGTCAGATGTCTTCCATaGACTCCCTGGAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGAVRCLP*TPWSSR
Trigger: CCTTGAGCTCCAGGGAGTTCATGGAAGACATCTGAC...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCACAAGCCCTGCAGACTaGTTCTTCAGCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASTSPAD*FFSILA
Trigger: GGCCAGGATGCTGAAGAAGCAGTCTGCAGGGCTTGT...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCTGGGCCGTCTCCTCGTaGCCGCAGTCCTGGCTAACG +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCWAVSS*PQSWLT
Trigger: CGTTAGCCAGGACTGCGGGCACGAGGAGACGGCCCA...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGTAGCCCTGGAACTTaGGGTGGTCCGGCGGCACCG +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCSSPGT*GGPAAP
Trigger: CGGTGCCGCCGGACCACCGCAAGTTCCAGGGCTACT...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCAGCTGGGTGAAGTaGACAAACTGCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGASSWVK*TNCWFS
Trigger: GCTGAACCAGCAGTTTGTGCACTTCACCCAGCTGGA...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGTCCAGCTGGGTGAAGTaGACAAACTGCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWSSWVK*TNCWFS
Trigger: GCTGAACCAGCAGTTTGTGCACTTCACCCAGCTGGA...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTAGGAGAGGTCTTGCTTaGCCCCTTCAACTTTCCATC +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTRRGLA*PLQLSI
Trigger: GATGGAAAGTTGAAGGGGGCAAGCAAGACCTCTCCT...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGCAAGGCCTTCCTCCCTaGACCTCTCTCCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQQGLPP*TSLLTA
Trigger: AGCTGTCAGGAGAGAGGTGCAGGGAGGAAGGCCTTG...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGTCGCCCAGGCTGGAGTaGAGTGGTATGATCTTGGAT +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWSPRLE*SGMILD
Trigger: ATCCAAGATCATACCACTGCACTCCAGCCTGGGCGA...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGAAACTCCCTGTGAATTaGCAGGGGCCAGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWKLPVN*QGPECG
Trigger: CCCACATTCTGGCCCCTGGCAATTCACAGGGAGTTT...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGCAACTGCCCCCGCTCTaGCCGCTCCAGACACATGTG +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRQLPPL*PLQTHV
Trigger: CACATGTGTCTGGAGCGGGCAGAGCGGGGGCAGTTG...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGGAAGACTCAGCCCCCTaGCACAGTAGGACAGGTTTC +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWEDSAP*HSRTGF
Trigger: GAAACCTGTCCTACTGTGGCAGGGGGCTGAGTCTTC...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGTACTATCCCATCTCTTaGTCAGGCAGGGGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: RKGHNAAIAGPIPRLKSRYYPIS*SGRGSY
Trigger: ATAACTTCCCCTGCCTGAGCAAGAGATGGGATAGTA...CCGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333055.8
CDS-3UTR CCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCCCCTGGAACTTGCGGTaGTCCGGCGGCACCGCAATG +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCPWNLR*SGGTAM
Trigger: CATTGCGGTGCCGCCGGACCACCGCAAGTTCCAGGG...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGGCAGCTCAGGCCTGCTaGCGTCCACCATCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRAAQAC*RPPSAP
Trigger: AGGAGCAGATGGTGGACGCCAGCAGGCCTGAGCTGC...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGAGGCCTTTGGCCACTTaGGCTCCAGCTCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLRPLAT*APAQPR
Trigger: TCTGGGCTGAGCTGGAGCCCAAGTGGCCAAAGGCCT...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp GGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGATAAACTTGAGGTGCTaGTCAAAGAACTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GVWSRERTLPNSLHMLQEINLRC*SKNCPW
Trigger: CCACGGGCAGTTCTTTGACCAGCACCTCAAGTTTAT...CTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCGCTCCTTCCGGTCATTaGTCCTCACTTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLAPSGH*SSLSPP
Trigger: AGGTGGAGAAAGTGAGGACCAATGACCGGAAGGAGC...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACAGCTCCTTCCGGTCATTaGTCCTCACTTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTAPSGH*SSLSPP
Trigger: AGGTGGAGAAAGTGAGGACCAATGACCGGAAGGAGC...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGGACATGCTATGCGCATaGAGCGTGGCGGCCAAACTC +
Preference number: 4 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQDMLCA*SVAAKL
Trigger: GAGTTTGGCCGCCACGCTCCATGCGCATAGCATGTC...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTAGTGCAGCTGGGGAATaGCCTGGAAGAGGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPSAAGE*PGRGRK
Trigger: TTTACGGCCTCTTCCAGGCCATTCCCCAGCTGCACT...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACAGTTGGATCATGTCAGTaGAAAGAGTATGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTVGSCQ*KEYGSS
Trigger: AGAAGAACCATACTCTTTCCACTGACATGATCCAAC...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCGCCTTAGAAGCGGCATaGCCCAGGAGGCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASALEAA*PRRQIS
Trigger: AGAAATCTGCCTCCTGGGCCATGCCGCTTCTAAGGC...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGGCCAGGAGTAAAGTCTaGCCGGGAGGAGGACAGACG +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLARSKV*PGGGQT
Trigger: CGTCTGTCCTCCTCCCGGCCAGACTTTACTCCTGGC...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427865.2
CDS-3UTR TCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGCCTCCCGGGTTCAAGTaGTTCTCCAGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLPPGFK*FSSLSF
Trigger: GAAGCTGAGGCTGGAGAATCACTTGAACCCGGGAGG...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGCTTGCTTCAGGAGCCTaGGAACCCAGTCTTTCGTCT +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWLASGA*EPSLSS
Trigger: AGACGAAAGACTGGGTTCTCAGGCTCCTGAAGCAAG...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTCAACTGAATCCATTCTaGCACACTGTCTTACAGTTC +
Preference number: 4 (lower is better)
Translates to: IDLSFPSGAGIQASCSATQLNPF*HTVLQF
Trigger: GAACTGTAAGACAGTGTGTCAGAATGGATTCAGTTG...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTTTCTTACAGCTGTGCTaGGACGTTTTTGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPFLQLC*DVFGWG
Trigger: GCCCCAGCCAAAAACGTCTCAGCACAGCTGTAAGAA...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCTTGTGCTGGGGCTCATaGGAAGAAACAGGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLLCWGS*EETGLR
Trigger: TCTAAGGCCTGTTTCTTCTCATGAGCCCCAGCACAA...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACACGTTGCCAAACTCTCTaGACATGCTCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTRCQTL*TCSRRK
Trigger: CTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACG...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGAGGAGAGGTCTTGCTTaGCCCCTTCAACTTTCCATC +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWRRGLA*PLQLSI
Trigger: GATGGAAAGTTGAAGGGGGCAAGCAAGACCTCTCCT...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGGCTGAGGAGAGGTCTTaGTTGCCCCCTTCAACTTTC +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWAEERS*LPPSTF
Trigger: GAAAGTTGAAGGGGGCAAGCAAGACCTCTCCTCAGC...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAGGTGTGTGCCACCATaGCCAGCAAGTTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: GVWSRERTLPNSLHMLQERCVPP*PASFCI
Trigger: AATACAAAAACTTGCTGGGCATGGTGGCACACACCT...CTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCATGATCTTGGATTACTaGAACCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLMILDY*NLCLPG
Trigger: ACCCGGGAGGCAGAGGTTGCAGTAATCCAAGATCAT...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATCTGGCATTTCCACTTaGTTTGGTATCCACAGGCGC +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTSGIST*FGIHRR
Trigger: GCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGA...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCTGCATCACTGGCATGTaGCCTTGTCAGTCAGCACTT +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLCITGM*PCQSAL
Trigger: AAGTGCTGACTGACAAGGGCACATGCCAGTGATGCA...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGTGCATCACTGGCATGTaGCCTTGTCAGTCAGCACTT +
Preference number: 4 (lower is better)
Translates to: RFTLPTICESEIQAALGWCITGM*PCQSAL
Trigger: AAGTGCTGACTGACAAGGGCACATGCCAGTGATGCA...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGGGCTTTTGGCAGGCTTaGCTCATTGCCCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLGFWQA*LIALAG
Trigger: CCCTGCAAGGGCAATGAGGCAAGCCTGCCAAAAGCC...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTCAGCAGCGGATAGGTaGCCCGAAAGTACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASSAADR*PESTRR
Trigger: TCTTCGAGTACTTTCGGGCCACCTATCCGCTGCTGA...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGACAGGCCGATGCAGCCTaGGGACTGTGGTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRQADAA*GLWSHL
Trigger: GAGGTGGGACCACAGTCCCCAGGCTGCATCGGCCTG...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTAGAGGCCGTAAAGGCTaGAATGGAACAGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPRGRKG*NGTVQP
Trigger: AGGCTGGACTGTTCCATTCCAGCCTTTACGGCCTCT...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGGAGACCGCCGGTGCCTaGCCTGAGAATCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLETAGA*PENPSA
Trigger: TGCACTTGGATTCTCAGGCCAGGCACCGGCGGTCTC...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTCTGAAGGACCTCTGGTaGCAAAACACTGACCTCTAC +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIILKDLW*QNTDLY
Trigger: GTAGAGGTCAGTGTTTTGCCACCAGAGGTCCTTCAG...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGCGCTCCAGACACATGTaGAGGGGGATTAAGTGTCGA +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWRSRHM*RGIKCR
Trigger: TCGACACTTAATCCCCCTCCACATGTGTCTGGAGCG...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGAGCCAAGGGAGGCAGTaGGGGAAAGTAACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQSQGRQ*GKVTAL
Trigger: CAAGGCTGTTACTTTCCCCCACTGCCTCCCTTGGCT...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCTCAGTGGAAAGAGTATaGTTCTTCTTTGTATTAGTC +
Preference number: 4 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSSVERV*FFFVLV
Trigger: GACTAATACAAAGAAGAACCATACTCTTTCCACTGA...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCTGCGGTCACAGGCGATaGCCAGGATGGGAATCACCG +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCCGHRR*PGWESP
Trigger: CGGTGATTCCCATCCTGGTCATCGCCTGTGACCGCA...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGACTCAGGGACCACCCTaGTCAGAGGACCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLTQGPP*SEDLVL
Trigger: AAGAACCAGGTCCTCTGATCAGGGTGGTCCCTGAGT...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTTTTCAAACCCACTCATaGAATCAAGTTCGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: IDLSFPSGAGIQASCSATFQTHS*NQVRES
Trigger: TGACTCACGAACTTGATTTCATGAGTGGGTTTGAAA...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGACTTGGCTAGCTGCATaGCATGCTATGCGCATGGAG +
Preference number: 4 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQTWLAA*HAMRME
Trigger: CTCCATGCGCATAGCATGTCATGCAGCTAGCCAAGT...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGCGCCTAGGCTTGCTCTaGGGATCAAGTAAGTTGGTA +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWRLGLL*GSSKLV
Trigger: TACCAACTTACTTGATCCTCAGAGCAAGCCTAGGCG...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACAATTGCCCACCATTTGTaGGTCAGAAATTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTIAHHL*VRNSGS
Trigger: GCTGCCTGAATTTCTGACTCACAAATGGTGGGCAAT...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGAACCAGTCTCCTAGATaGCACTGCTCCCCACCCTTG +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLNQSPR*HCSPPL
Trigger: CAAGGGTGGGGAGCAGTGTCATCTAGGAGACTGGTT...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTAAGCTCAGAGTCTGGTaGTGGACAGATCCCAGATAC +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPKLRVW*WTDPRY
Trigger: GTATCTGGGATCTGTCCATCACCAGACTCTGAGCTT...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCTCCAAAGTCCATGGCTaGGCTGACCCTGACGGGGAG +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCSKVHG*ADPDGE
Trigger: CTCCCCGTCAGGGTCAGCTCAGCCATGGACTTTGGA...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGTTGATAAACTTGAGGTaGTGGTCAAAGAACTGCCCG +
Preference number: 4 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQLINLR*WSKNCP
Trigger: CGGGCAGTTCTTTGACCAGCACCTCAAGTTTATCAA...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCACACAGTGGTTTCCTaGTTAATACCCCGCAACATA +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTHTVVS*LIPRNI
Trigger: TATGTTGCGGGGTATTAAGCAGGAAACCACTGTGTG...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGCAAACTCTCTGCACATaGTCCAGGAGAAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWQTLCT*SRRKLR
Trigger: CCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTG...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTCGTTGCCAAACTCTCTaGACATGCTCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPRCQTL*TCSRRK
Trigger: CTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACG...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCCAAGAGAGCGAACGTTaGCAAACTCTCTGCACATGC +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASQESER*QTLCTC
Trigger: GCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTG...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGCAAGGCCTTCCTCCCTaGACCTCTCTCCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLQGLPP*TSLLTA
Trigger: AGCTGTCAGGAGAGAGGTGCAGGGAGGAAGGCCTTG...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTAGGTGTGTGCCACCATaGCCAGCAAGTTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPRCVPP*PASFCI
Trigger: AATACAAAAACTTGCTGGGCATGGTGGCACACACCT...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTCTGCCAAGAAAGTTaGCTAGCCCAGGGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIFCQES*LAQGFW
Trigger: CCAAAAACCCTGGGCTAGGCAACTTTCTTGGCAGAA...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGATGCACTTGGCTAGCTaGATGACATGCTATGCGCAT +
Preference number: 4 (lower is better)
Translates to: RFTLPTICESEIQAALGWMHLAS*MTCYAH
Trigger: ATGCGCATAGCATGTCATGCAGCTAGCCAAGTGCAT...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTCACCTCTGTGTGCCTaGTTCCTCACTGGTAAAACA +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIISPLCA*FLTGKT
Trigger: TGTTTTACCAGTGAGGAAGCAGGCACACAGAGGTGA...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGTCTGGCATTTCCACTTaGTTTGGTATCCACAGGCGC +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWSGIST*FGIHRR
Trigger: GCGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGA...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGTATTTGTAAAGGGGTaGTCTGTATCTAACCCTCTA +
Preference number: 4 (lower is better)
Translates to: PERAQCSYRRADSTSEITVFVKG*SVSNPL
Trigger: TAGAGGGTTAGATACAGAGCACCCCTTTACAAATAC...CGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGATAAAGAATGAGGCTTaGCCTCCCTTCCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWIKNEA*PPFPSP
Trigger: AGGAGAGGGGAAGGGAGGGCAAGCCTCATTCTTTAT...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTATACCCGTTTCACATTaGCCACCATTTGTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPIPVSH*PPFVSQ
Trigger: CTGACTCACAAATGGTGGGCAATGTGAAACGGGTAT...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCGGCCCAAGTCCTGCTTaGAGCAGCCCCACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCGPSPA*SSPTVF
Trigger: GAACACTGTGGGGCTGCTGCAAGCAGGACTTGGGCC...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000446023.6
CDS-3UTR CCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGTCAGCAGCGGATAGGTaGCCCGAAAGTACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQSAADR*PESTRR
Trigger: TCTTCGAGTACTTTCGGGCCACCTATCCGCTGCTGA...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGCCTCAGCTCATGATGTaGCAAGGAGGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLPQLMM*QGGAQE
Trigger: TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGG...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGCTCCACCTTGTGGCCTaGACTTCCTTTCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLLHLVA*TSFPTW
Trigger: CCAGGTGGGAAAGGAAGTCCAGGCCACAAGGTGGAG...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGCACTGGGGTTGCGTTTaGGAGTCCAAGCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLHWGCV*ESKRHC
Trigger: ACAGTGGCGCTTGGACTCCCAAACGCAACCCCAGTG...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTCTGAAGGACCTCTGGTaGCAAAACACTGACCTCTAC +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPLKDLW*QNTDLY
Trigger: GTAGAGGTCAGTGTTTTGCCACCAGAGGTCCTTCAG...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCATCCACTGTGAGAACTaGCCCATCTGTCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASIHCEN*PICLVL
Trigger: CAGCACAAGACAGATGGGCCAGTTCTCACAGTGGAT...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
3UTR CAA 72 bp ATCAAACAGTATTTCCAAAGGAGGCTTTTGGCAGGCTaGCCTCATTGCCCTTGCAGGGAAGGCTGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: IKQYFQRRLLAG*PHCPCREGCLS
Trigger: AGACAGGCAGCCTTCCCTGCAAGGGCAATGAGGCAAGCCTGCCAAAAGCCTCCTTTGGAAATACTGTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCCCTTGGCGAAAGCCTTaGAGCTGTCCCTGCCCGTAT +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCPWRKP*SCPCPY
Trigger: ATACGGGCAGGGACAGCTTCAAGGCTTTCGCCAAGG...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR TCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGGGCATAGTCCCTCTCTaGGGTAAGGCAAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLGIVPL*GKARER
Trigger: CCTCTCTCTTGCCTTACCTCAGAGAGGGACTATGCC...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGACTCAGGGACCACCCTaGTCAGAGGACCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLTQGPP*SEDLVL
Trigger: AAGAACCAGGTCCTCTGATCAGGGTGGTCCCTGAGT...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAGTCCAAGCGCCACTGTaGGGCCAACCCTGGTATCAG +
Preference number: 4 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRVQAPL*GQPWYQ
Trigger: CTGATACCAGGGTTGGCCTCACAGTGGCGCTTGGAC...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGCCAGCCTCAGCTTCCTaGGTAGCTGGGATTACAGGT +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLPASAS*VAGITG
Trigger: ACCTGTAATCCCAGCTACTCAGGAAGCTGAGGCTGG...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGTCCAGCCTCTTTTGCTaGCAGGGGTGCCTGTGTGAT +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLSSLFC*QGCLCD
Trigger: ATCACACAGGCACCCCTGTCAGCAAAAGAGGCTGGA...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACATTGCCCACCATTTGTaGGTCAGAAATTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHIAHHL*VRNSGS
Trigger: GCTGCCTGAATTTCTGACTCACAAATGGTGGGCAAT...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGCTCCATTTTCAAAACTaGGAATCCCAAATCAGATCC +
Preference number: 4 (lower is better)
Translates to: GVWSRERTLPNSLHMLQELHFQN*ESQIRS
Trigger: GGATCTGATTTGGGATTCTCAGTTTTGAAAATGGAG...CTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGCTGGCGTCCACCATCTaGTCCTTGCCGTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRLASTI*SLPLSF
Trigger: GAATGACAACGGCAAGGAGCAGATGGTGGACGCCAG...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGTGCTGGTCAAAGAACTaGCCGTGGCTCACACCCTTG +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRCWSKN*PWLTPL
Trigger: CAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCA...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGTTGATAAACTTGAGGTaGTGGTCAAAGAACTGCCCG +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWLINLR*WSKNCP
Trigger: CGGGCAGTTCTTTGACCAGCACCTCAAGTTTATCAA...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp TCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCAGGTGAAGTGCACAAACTaGTGGTTCAGCTTGATAAAC +
Preference number: 4 (lower is better)
Translates to: SHCPPFVSQKFRQPSAGQVKCTN*WFSLIN
Trigger: GTTTATCAAGCTGAACCAGCAGTTTGTGCACTTCAC...CTGCCCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTGTGAAGTGCACAAACTaGTGGTTCAGCTTGATAAAC +
Preference number: 4 (lower is better)
Translates to: KSQVREKGSGQESERCQTVKCTN*WFSLIN
Trigger: GTTTATCAAGCTGAACCAGCAGTTTGTGCACTTCAC...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTCACACAGTGGTTTCCTaGTTAATACCCCGCAACATA +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIHTVVS*LIPRNI
Trigger: TATGTTGCGGGGTATTAAGCAGGAAACCACTGTGTG...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGTCGCCCAGGCTGGAGTaGAGTGGTATGATCTTGGAT +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLSPRLE*SGMILD
Trigger: ATCCAAGATCATACCACTGCACTCCAGCCTGGGCGA...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGGCTGGAGTGCAGTGGTaGGATCTCAGGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLAGVQW*DLRSLQ
Trigger: TTGCAGTGACCTGAGATCGCACCACTGCACTCCAGC...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGTTCTGCCAAGAAAGTTaGCTAGCCCAGGGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWFCQES*LAQGFW
Trigger: CCAAAAACCCTGGGCTAGGCAACTTTCTTGGCAGAA...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGCTCCAAAGTAGTTTCTaGCAAGAAAGTTGCCTAGCC +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWLQSSF*QESCLA
Trigger: GGCTAGGCAACTTTCTTGGCAGAAACTACTTTGGAG...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTAGGCTGTCTGCCCACTaGTTTTGTTCCATAAAGAAT +
Preference number: 4 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPRLSAH*FCSIKN
Trigger: ATTCTTTATGGAACAAAAGCAGTGGGCAGACAGCCT...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGATACCCGTTTCACATTaGCCACCATTTGTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RFTLPTICESEIQAALGWIPVSH*PPFVSQ
Trigger: CTGACTCACAAATGGTGGGCAATGTGAAACGGGTAT...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTACTATCCCATCTCTTaGTCAGGCAGGGGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIYYPIS*SGRGSY
Trigger: ATAACTTCCCCTGCCTGAGCAAGAGATGGGATAGTA...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCTCAAAGAACTGCCCGTaGCTCACACCCTTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCSKNCP*LTPLRP
Trigger: TGGCCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGA...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTATAAACTTGAGGTGCTaGTCAAAGAACTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPINLRC*SKNCPW
Trigger: CCACGGGCAGTTCTTTGACCAGCACCTCAAGTTTAT...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACCAGGCTGGAGTGCAGTaGTATGATCTTGGATTACTG +
Preference number: 4 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHQAGVQ*YDLGLL
Trigger: CAGTAATCCAAGATCATACCACTGCACTCCAGCCTG...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGCCAGGGGCCAGAATGTaGGTAGGTGGGAGAACAGAT +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRPGARM*VGGRTD
Trigger: ATCTGTTCTCCCACCTACCCACATTCTGGCCCCTGG...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGTATCCGAGAGTTCTaGTTTCTACTGTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLSIREF*FLLLLS
Trigger: GCTGAGCAACAGTAGAAACCAGAACTCTCGGATACT...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTACTGCTCCCCACCCTTaGATGCTGATGAGTAAATGT +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPTAPHP*MLMSKC
Trigger: ACATTTACTCATCAGCATCCAAGGGTGGGGAGCAGT...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGACTGCTCCCCACCCTTaGATGCTGATGAGTAAATGT +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWTAPHP*MLMSKC
Trigger: ACATTTACTCATCAGCATCCAAGGGTGGGGAGCAGT...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGTATATATTTGCCGTGTaGCAAAATATTCCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: PERAQCSYRRADSTSEITYIFAV*QNIPRW
Trigger: CCAACGAGGAATATTTTGCCACACGGCAAATATATA...CGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CAA 72 bp AACCTGCAAACTCGAGGCTGGCTGAACTCTACAGCATaGACTAACACGGGGCTTTTCCATCTGGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: NLQTRGWLNSTA*TNTGLFHLAFP
Trigger: TGGAAATGCCAGATGGAAAAGCCCCGTGTTAGTCAATGCTGTAGAGTTCAGCCAGCCTCGAGTTTGCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCGGCATAGTCCCTCTCTaGGGTAAGGCAAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCGIVPL*GKARER
Trigger: CCTCTCTCTTGCCTTACCTCAGAGAGGGACTATGCC...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGCAACAGGGAGGGCACTaGTTTTCAGAAAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRQQGGH*FSERRG
Trigger: ACCCCTCCTTTCTGAAAATCAGTGCCCTCCCTGTTG...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCTGCTCCACCTCATGCTaGGAGGAGCCTGTGTGTCAA +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCCSTSC*EEPVCQ
Trigger: TTGACACACAGGCTCCTCTCAGCATGAGGTGGAGCA...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAGTCCTGGAGACAGAGTaGGCAGGAACCCACAGTGAG +
Preference number: 4 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRVLETE*AGTHSE
Trigger: CTCACTGTGGGTTCCTGCTCACTCTGTCTCCAGGAC...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGAGAACAGATGGAGGCTaGAGGACCTCTGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLRTDGG*RTSGGK
Trigger: TTTGCCACCAGAGGTCCTTCAGCCTCCATCTGTTCT...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGCTGGGAGCCATGTGTTaGAGACGGCGGAACAACAAA +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLLGAMC*RRRNNK
Trigger: TTTGTTGTTCCGCCGTCTTCAACACATGGCTCCCAG...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAGGGCAGCATTTGCTGTaGGCTGGGAGCCATGTGTTG +
Preference number: 4 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRGQHLL*AGSHVL
Trigger: CAACACATGGCTCCCAGCTCACAGCAAATGCTGCCC...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCCAGACCACATTCCAGTaGGTGGAACGTGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCQTTFQ*VEREGR
Trigger: CCTTCCCTCACGTTCCACTCACTGGAATGTGGTCTG...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCCTGGCGTCCACCATCTaGTCCTTGCCGTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCLASTI*SLPLSF
Trigger: GAATGACAACGGCAAGGAGCAGATGGTGGACGCCAG...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGTTGATAAACTTGAGGTaGTGGTCAAAGAACTGCCCG +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWLINLR*WSKNCP
Trigger: CGGGCAGTTCTTTGACCAGCACCTCAAGTTTATCAA...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTTTGATAAACTTGAGGTaGTGGTCAAAGAACTGCCCG +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPLINLR*WSKNCP
Trigger: CGGGCAGTTCTTTGACCAGCACCTCAAGTTTATCAA...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCGTGAAGTGCACAAACTaGTGGTTCAGCTTGATAAAC +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGAVKCTN*WFSLIN
Trigger: GTTTATCAAGCTGAACCAGCAGTTTGTGCACTTCAC...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCGCTAGCTGCATGACATaGTATGCGCATGGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCASCMT*YAHGAW
Trigger: CCACGCTCCATGCGCATAGCATGTCATGCAGCTAGC...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGTTCTCTTGTCTCAGTTaGTCTCCAGGAGATCATCAA +
Preference number: 4 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWFSCLS*SPGDHQ
Trigger: TTGATGATCTCCTGGAGAGCAACTGAGACAAGAGAA...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCCAGGGAGAAGGGGTCTaGTCAAGAGAGCGAACGTTG +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCQGEGV*SRERTL
Trigger: CAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTG...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGTGGTTAGTATCATTTTaGCCACAAATATGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GVWSRERTLPNSLHMLQEWLVSF*PQICPL
Trigger: AAGGGGACATATTTGTGGCCAAAATGATACTAACCA...CTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCACAAGGAAGCCCCTTTaGTTAGTATCATTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GKKGQADRILSSTKPAGATRKPL*LVSFWP
Trigger: TGGCCAAAATGATACTAACCAAAGGGGCTTCCTTGT...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAACAGGCACTCTCACTaGGGTTGCGTTTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCNRHSH*GCVWES
Trigger: GGACTCCCAAACGCAACCCCAGTGAGAGTGCCTGTT...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGAGAAAACTGCATCACTaGCATGTGCCCTTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQRKLHH*HVPLSV
Trigger: GACTGACAAGGGCACATGCCAGTGATGCAGTTTTCT...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACAGTATCCGAGAGTTCTaGTTTCTACTGTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHSIREF*FLLLLS
Trigger: GCTGAGCAACAGTAGAAACCAGAACTCTCGGATACT...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
3UTR CAA 72 bp GGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTaGGCCACAAATATGTCCCCTTCTCCCATAACTCAG +
Preference number: 4 (lower is better)
Translates to: GPDKEAPLVSII*ATNMSPSPITQ
Trigger: CTGAGTTATGGGAGAAGGGGACATATTTGTGGCCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACACTCCATTTTCAAAACTaGGAATCCCAAATCAGATCC +
Preference number: 4 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTLHFQN*ESQIRS
Trigger: GGATCTGATTTGGGATTCTCAGTTTTGAAAATGGAG...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCGTGAAGTGCACAAACTaGTGGTTCAGCTTGATAAAC +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASVKCTN*WFSLIN
Trigger: GTTTATCAAGCTGAACCAGCAGTTTGTGCACTTCAC...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGTATAAACTGCTAGGCTaGAAGGAGAGAAGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQYKLLG*KERRAK
Trigger: CTTAGCCCTTCTCTCCTTGCAGCCTAGCAGTTTATA...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCATGTTGCACGTGATATaGAGAGGTAACAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASMLHVI*RGNSLS
Trigger: AGACAGACTGTTACCTCTGCATATCACGTGCAACAT...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGATGATCTTGGATTACTaGAACCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLMILDY*NLCLPG
Trigger: ACCCGGGAGGCAGAGGTTGCAGTAATCCAAGATCAT...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCACAAGGAAGCCCCTTTaGTTAGTATCATTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KKGQADRILSSTKPAGASTRKPL*LVSFWP
Trigger: TGGCCAAAATGATACTAACCAAAGGGGCTTCCTTGT...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTACAAGGAAGCCCCTTTaGTTAGTATCATTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPTRKPL*LVSFWP
Trigger: TGGCCAAAATGATACTAACCAAAGGGGCTTCCTTGT...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGCAGGAAATAGGGCCCTaGTGTCTACTTCCTAAACTC +
Preference number: 4 (lower is better)
Translates to: IKKINAPKRETQAGRCSLQEIGP*CLLPKL
Trigger: GAGTTTAGGAAGTAGACACCAGGGCCCTATTTCCTG...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGTTCCGGGGCTGTGTGTaGCCTTCAGGAATTTCAGTT +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRFRGCV*PSGISV
Trigger: AACTGAAATTCCTGAAGGCCACACACAGCCCCGGAA...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCGTTGGATCATGTCAGTaGAAAGAGTATGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLVGSCQ*KEYGSS
Trigger: AGAAGAACCATACTCTTTCCACTGACATGATCCAAC...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGACACCTGAGCAAGCCTTaGTGGGTGAATACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRHLSKP*WVNTRR
Trigger: TCTCCTGGTATTCACCCATCAAGGCTTGCTCAGGTG...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCGACTTGATCCACAAATaGGATCCCACCAGTGACCCA +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCDLIHK*DPTSDP
Trigger: TGGGTCACTGGTGGGATCTCATTTGTGGATCAAGTC...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGTCTCATCAGAAAGCCTaGAATCCCACGTTAGATATT +
Preference number: 4 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWSHQKA*NPTLDI
Trigger: AATATCTAACGTGGGATTTCAGGCTTTCTGATGAGA...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCCGTTGCCAAACTCTCTaGACATGCTCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCRCQTL*TCSRRK
Trigger: CTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACG...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACGTATTTGTAAAGGGGTaGTCTGTATCTAACCCTCTA +
Preference number: 4 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHVFVKG*SVSNPL
Trigger: TAGAGGGTTAGATACAGAGCACCCCTTTACAAATAC...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGTTCTCTTGTCTCAGTTaGTCTCCAGGAGATCATCAA +
Preference number: 4 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQFSCLS*SPGDHQ
Trigger: TTGATGATCTCCTGGAGAGCAACTGAGACAAGAGAA...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333055.8
CDS-3UTR CCA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCTGGTTAGTATCATTTTaGCCACAAATATGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GQESERCQTLCTCSRRKLWLVSF*PQICPL
Trigger: AAGGGGACATATTTGTGGCCAAAATGATACTAACCA...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAAGGCTGAAGGACCTCTaGTGGCAAAACACTGACCTC +
Preference number: 4 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRRLKDL*WQNTDL
Trigger: GAGGTCAGTGTTTTGCCACCAGAGGTCCTTCAGCCT...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGACGCTCCAGACACATGTaGAGGGGGATTAAGTGTCGA +
Preference number: 4 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRRSRHM*RGIKCR
Trigger: TCGACACTTAATCCCCCTCCACATGTGTCTGGAGCG...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTACTGTCTTACAGTTCTaGTATAAAGGGTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPTVLQF*YKGSDF
Trigger: GAAGTCTGACCCTTTATACCAGAACTGTAAGACAGT...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCATCCACTGTGAGAACTaGCCCATCTGTCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCIHCEN*PICLVL
Trigger: CAGCACAAGACAGATGGGCCAGTTCTCACAGTGGAT...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAAAGGTCATCGTTCTTaGGATCTCAGGGCGTATGCA +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCKGHRS*DLRAYA
Trigger: TGCATACGCCCTGAGATCTCAAGAACGATGACCTTT...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR GCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGTATAAACTGCTAGGCTaGAAGGAGAGAAGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRYKLLG*KERRAK
Trigger: CTTAGCCCTTCTCTCCTTGCAGCCTAGCAGTTTATA...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGTCCCTCCCACTCATCTaGTTTCTTTCCTCAACTTTG +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRSLPLI*FLSSTL
Trigger: CAAAGTTGAGGAAAGAAAGCAGATGAGTGGGAGGGA...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGCTCCAAAGTAGTTTCTaGCAAGAAAGTTGCCTAGCC +
Preference number: 4 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRLQSSF*QESCLA
Trigger: GGCTAGGCAACTTTCTTGGCAGAAACTACTTTGGAG...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCTCACCTCTGTGTGCCTaGTTCCTCACTGGTAAAACA +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCSPLCA*FLTGKT
Trigger: TGTTTTACCAGTGAGGAAGCAGGCACACAGAGGTGA...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCCACACAGTGGTTTCCTaGTTAATACCCCGCAACATA +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCHTVVS*LIPRNI
Trigger: TATGTTGCGGGGTATTAAGCAGGAAACCACTGTGTG...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR GCA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGATGTTGCACGTGATATaGAGAGGTAACAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLMLHVI*RGNSLS
Trigger: AGACAGACTGTTACCTCTGCATATCACGTGCAACAT...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCATTAGGAGGCAGCCATaGACCTTTCTTCTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCIRRQP*TFLLLS
Trigger: AGACAAGAGAAGAAAGGTGCATGGCTGCCTCCTAAT...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGACAGGAAATAGGGCCCTaGTGTCTACTTCCTAAACTC +
Preference number: 4 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRQEIGP*CLLPKL
Trigger: GAGTTTAGGAAGTAGACACCAGGGCCCTATTTCCTG...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR GCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCGTGAAGTGCACAAACTaGTGGTTCAGCTTGATAAAC +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCVKCTN*WFSLIN
Trigger: GTTTATCAAGCTGAACCAGCAGTTTGTGCACTTCAC...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CCA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGTCAGTGGAAAGAGTATaGTTCTTCTTTGTATTAGTC +
Preference number: 4 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQSVERV*FFFVLV
Trigger: GACTAATACAAAGAAGAACCATACTCTTTCCACTGA...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR TCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGACAACTGAATCCATTCTaGCACACTGTCTTACAGTTC +
Preference number: 4 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRQLNPF*HTVLQF
Trigger: GAACTGTAAGACAGTGTGTCAGAATGGATTCAGTTG...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCTGGTTAGTATCATTTTaGCCACAAATATGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GKIKKINAPKRETQAGRCWLVSF*PQICPL
Trigger: AAGGGGACATATTTGTGGCCAAAATGATACTAACCA...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR TCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAATGAAATCAAGTTCGTaGGTCACAAAAAGCGTTTTG +
Preference number: 4 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRMKSSS*VTKSVL
Trigger: CAAAACGCTTTTTGTGACTCACGAACTTGATTTCAT...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CCA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGATATATATTTGCCGTGTaGCAAAATATTCCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRYIFAV*QNIPRW
Trigger: CCAACGAGGAATATTTTGCCACACGGCAAATATATA...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS GCA 90 bp TGCAGGGTGCGCCCGCGCTGCCCTCTGACAGGTGCTGTTGGTACCTaGGGCCGGGCCCGCCGTCGCCGGCGCGTGAACGGCCTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: CRVRPRCPLTGAVGT*GRARRRRRVNGLPE
Trigger: CTCGGGCAGGCCGTTCACGCGCCGGCGACGGCGGGCCCGGCCGCAGGTACCAACAGCACCTGTCAGAGGGCAGCGCGGGCGCACCCTGCA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510962.1
CDS CCA 90 bp GGGCCCTTGCAGGGTGCGCCCGCGCTGCCCTCTGACAGGTGCTGTTaGTACCTGCGGCCGGGCCCGCCGTCGCCGGCGCGTGAACGGCCT +
Preference number: 5 (lower is better)
Translates to: GPLQGAPALPSDRCC*YLRPGPPSPARERP
Trigger: AGGCCGTTCACGCGCCGGCGACGGCGGGCCCGGCCGCAGGTACCAACAGCACCTGTCAGAGGGCAGCGCGGGCGCACCCTGCAAGGGCCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510962.1
CDS GCA 90 bp CTGCCAGGCTCAGGTCCTCCCGACGTCCTGGCCCCGAACTTGGCCTaGTCCGGGGCGCAGGGAGCGAGCCCGGTGCCCAGGCGCGTCCCA +
Preference number: 5 (lower is better)
Translates to: LPGSGPPDVLAPNLA*SGAQGASPVPRRVP
Trigger: TGGGACGCGCCTGGGCACCGGGCTCGCTCCCTGCGCCCCGGAGCAGGCCAAGTTCGGGGCCAGGACGTCGGGAGGACCTGAGCCTGGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504671.1
ENST00000505682.1
ENST00000507384.1
CDS GCA 90 bp GAGGCAGGGCCCTTGCAGGGTGCGCCCGCGCTGCCCTCTGACAGGTaGTGTTGGTACCTGCGGCCGGGCCCGCCGTCGCCGGCGCGTGAA +
Preference number: 5 (lower is better)
Translates to: EAGPLQGAPALPSDR*CWYLRPGPPSPARE
Trigger: TTCACGCGCCGGCGACGGCGGGCCCGGCCGCAGGTACCAACAGCACCTGTCAGAGGGCAGCGCGGGCGCACCCTGCAAGGGCCCTGCCTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510962.1
CDS CCA 90 bp GAGGCAGCCATGCACCAGGTCCTCCCGACGTCCTGGCCCCGAACTTaGCCTGCTCCGGGGCGCAGGGAGCGAGCCCGGTGCCCAGGCGCG +
Preference number: 5 (lower is better)
Translates to: EAAMHQVLPTSWPRT*PAPGRRERARCPGA
Trigger: CGCGCCTGGGCACCGGGCTCGCTCCCTGCGCCCCGGAGCAGGCCAAGTTCGGGGCCAGGACGTCGGGAGGACCTGGTGCATGGCTGCCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307826.5
CDS CCA 90 bp GCTCTCTGCCAGGCTCAGGTCCTCCCGACGTCCTGGCCCCGAACTTaGCCTGCTCCGGGGCGCAGGGAGCGAGCCCGGTGCCCAGGCGCG +
Preference number: 5 (lower is better)
Translates to: ALCQAQVLPTSWPRT*PAPGRRERARCPGA
Trigger: CGCGCCTGGGCACCGGGCTCGCTCCCTGCGCCCCGGAGCAGGCCAAGTTCGGGGCCAGGACGTCGGGAGGACCTGAGCCTGGCAGAGAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504671.1
ENST00000505682.1
ENST00000507384.1
CDS GCA 90 bp AGCCATGCACCAGGTCCTCCCGACGTCCTGGCCCCGAACTTGGCCTaGTCCGGGGCGCAGGGAGCGAGCCCGGTGCCCAGGCGCGTCCCA +
Preference number: 5 (lower is better)
Translates to: SHAPGPPDVLAPNLA*SGAQGASPVPRRVP
Trigger: TGGGACGCGCCTGGGCACCGGGCTCGCTCCCTGCGCCCCGGAGCAGGCCAAGTTCGGGGCCAGGACGTCGGGAGGACCTGGTGCATGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307826.5
CDS GCA 90 bp GCGGTGGGCACCCTCCCCCGCTGGCTCGACAGGGCATCCCCGATCTaGTGCAGCAGCCCACGCTGCCGCTCCAGCTCCACCTCGGCGTCT +
Preference number: 5 (lower is better)
Translates to: AVGTLPRWLDRASPI*CSSPRCRSSSTSAS
Trigger: AGACGCCGAGGTGGAGCTGGAGCGGCAGCGTGGGCTGCTGCAGCAGATCGGGGATGCCCTGTCGAGCCAGCGGGGGAGGGTGCCCACCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000502678.1
ENST00000504671.1
ENST00000506269.1
ENST00000506889.1
ENST00000512695.1
ENST00000513431.5
ENST00000514283.1
ENST00000514438.1
CDS TCA 90 bp CCGGCGGCACCGCAATGCTGCTCAGGTCGGGCTGCCGGATGTGCGTaGCCGCGCTGCCGTAGGAGGCGATGGCCTGGGCCGTCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: PAAPQCCSGRAAGCA*PRCRRRRWPGPSPR
Trigger: ACGAGGAGACGGCCCAGGCCATCGCCTCCTACGGCAGCGCGGTCACGCACATCCGGCAGCCCGACCTGAGCAGCATTGCGGTGCCGCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000504671.1
CDS GCA 90 bp GTGGGCACCCTCCCCCGCTGGCTCGACAGGGCATCCCCGATCTGCTaGAGCAGCCCACGCTGCCGCTCCAGCTCCACCTCGGCGTCTTGG +
Preference number: 5 (lower is better)
Translates to: VGTLPRWLDRASPIC*SSPRCRSSSTSASW
Trigger: CCAAGACGCCGAGGTGGAGCTGGAGCGGCAGCGTGGGCTGCTGCAGCAGATCGGGGATGCCCTGTCGAGCCAGCGGGGGAGGGTGCCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000502678.1
ENST00000504671.1
ENST00000506269.1
ENST00000506889.1
ENST00000512695.1
ENST00000513431.5
ENST00000514283.1
ENST00000514438.1
CDS GCA 90 bp CTGCCTCTCTTGACGAGGCAGGGCCCTTGCAGGGTGCGCCCGCGCTaGCCTCTGACAGGTGCTGTTGGTACCTGCGGCCGGGCCCGCCGT +
Preference number: 5 (lower is better)
Translates to: LPLLTRQGPCRVRPR*PLTGAVGTCGRARR
Trigger: ACGGCGGGCCCGGCCGCAGGTACCAACAGCACCTGTCAGAGGGCAGCGCGGGCGCACCCTGCAAGGGCCCTGCCTCGTCAAGAGAGGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510962.1
ENST00000512080.1
CDS GCA 90 bp ACCGGGGAGGGCAGGCCAGGGGACGGTTCAAGGCTGCCCTGGGCTTaGCCGGCTCCCTTGCCCGCAGTCCTAGGGATGCCTCCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: TGEGRPGDGSRLPWA*PAPLPAVLGMPPLD
Trigger: GTCCAGAGGAGGCATCCCTAGGACTGCGGGCAAGGGAGCCGGGCAAGCCCAGGGCAGCCTTGAACCGTCCCCTGGCCTGCCCTCCCCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000502678.1
ENST00000504671.1
ENST00000506269.1
ENST00000506889.1
ENST00000507384.1
ENST00000512695.1
ENST00000513431.5
ENST00000514283.1
ENST00000514438.1
CDS CCA 90 bp TGCTGCAGCAGCCCACGCTGCCGCTCCAGCTCCACCTCGGCGTCTTaGGCCAGGCGAATCACTTCCCGGGTGAGGCTGGCGGGGTCGCCA +
Preference number: 5 (lower is better)
Translates to: CCSSPRCRSSSTSAS*ARRITSRVRLAGSP
Trigger: TGGCGACCCCGCCAGCCTCACCCGGGAAGTGATTCGCCTGGCCCAAGACGCCGAGGTGGAGCTGGAGCGGCAGCGTGGGCTGCTGCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000502678.1
ENST00000504671.1
ENST00000506269.1
ENST00000506889.1
ENST00000512695.1
ENST00000513431.5
ENST00000514283.1
ENST00000514438.1
CDS TCA 90 bp CACTTCCCGGGTGAGGCTGGCGGGGTCGCCATCGAGAGCGCTGACTaGGGGTGGCCTGCCAGGTGCTGGGCGCGTCCAGAAGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: HFPGEAGGVAIESAD*GWPARCWARPEEEE
Trigger: CTCCTCTTCTTCTGGACGCGCCCAGCACCTGGCAGGCCACCCTCAGTCAGCGCTCTCGATGGCGACCCCGCCAGCCTCACCCGGGAAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000502678.1
ENST00000504671.1
ENST00000506269.1
ENST00000506889.1
ENST00000512695.1
ENST00000513431.5
ENST00000514283.1
ENST00000514438.1
CDS GCA 90 bp GCGCCCAGCGGTAGTGGCGCGCGATCTTGTAGTAGCCCTGGAACTTaGGGTGGTCCGGCGGCACCGCAATGCTGCTCAGGTCGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: APSGSGARSCSSPGT*GGPAAPQCCSGRAA
Trigger: GGCAGCCCGACCTGAGCAGCATTGCGGTGCCGCCGGACCACCGCAAGTTCCAGGGCTACTACAAGATCGCGCGCCACTACCGCTGGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000504671.1
CDS CCA 90 bp GCTCCGGCCGCCGCATCCAGTCGTCCCAGAAGGCCTTTGGCCACTTaGGCTCCAGCTCAGCCCAGAGCTCGGCCAACAGCAGCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: APAAASSRPRRPLAT*APAQPRARPTAASP
Trigger: TGGGCTGGCTGCTGTTGGCCGAGCTCTGGGCTGAGCTGGAGCCCAAGTGGCCAAAGGCCTTCTGGGACGACTGGATGCGGCGGCCGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS TCA 90 bp GCAGCTTGTCCAGGCAGCGCCGAACAGTGCTGCGGTCACAGGCGATaGCCAGGATGGGAATCACCGCCGGCGCGGGGGTCACAGGCACAC +
Preference number: 5 (lower is better)
Translates to: AACPGSAEQCCGHRR*PGWESPPARGSQAH
Trigger: GTGTGCCTGTGACCCCCGCGCCGGCGGTGATTCCCATCCTGGTCATCGCCTGTGACCGCAGCACTGTTCGGCGCTGCCTGGACAAGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000504671.1
ENST00000506889.1
ENST00000514283.1
CDS TCA 90 bp CCAGGGGCTCCAGCGCACAGAGCCAGTTTCGCCAGCGATCAGGTCTaGGGCCTGGATTCCACGAGGCCGGTGCAAGCCAGGAGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: PGAPAHRASFASDQV*GLDSTRPVQARSQP
Trigger: GGGCTGGCTCCTGGCTTGCACCGGCCTCGTGGAATCCAGGCCTCAGACCTGATCGCTGGCGAAACTGGCTCTGTGCGCTGGAGCCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427865.2
CDS GCA 90 bp ATCGTTCTTGAGATCTCAGGGCGTATGCAGGCCCGCCCCTGCCGCTaGTCCGGCCGCCGCATCCAGTCGTCCCAGAAGGCCTTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: IVLEISGRMQARPCR*SGRRIQSSQKAFGH
Trigger: GTGGCCAAAGGCCTTCTGGGACGACTGGATGCGGCGGCCGGAGCAGCGGCAGGGGCGGGCCTGCATACGCCCTGAGATCTCAAGAACGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS GCA 90 bp CACCCTTGCGGCCAAAGGTCATCGTTCTTGAGATCTCAGGGCGTATaGAGGCCCGCCCCTGCCGCTGCTCCGGCCGCCGCATCCAGTCGT +
Preference number: 5 (lower is better)
Translates to: HPCGQRSSFLRSQGV*RPAPAAAPAAASSR
Trigger: ACGACTGGATGCGGCGGCCGGAGCAGCGGCAGGGGCGGGCCTGCATACGCCCTGAGATCTCAAGAACGATGACCTTTGGCCGCAAGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CCA 90 bp CTCCAGCGCACAGAGCCAGTTTCGCCAGCGATCAGGTCTGAGGCCTaGATTCCACGAGGCCGGTGCAAGCCAGGAGCCAGCCCCACTCCC +
Preference number: 5 (lower is better)
Translates to: LQRTEPVSPAIRSEA*IPRGRCKPGASPTP
Trigger: GGGAGTGGGGCTGGCTCCTGGCTTGCACCGGCCTCGTGGAATCCAGGCCTCAGACCTGATCGCTGGCGAAACTGGCTCTGTGCGCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427865.2
CDS CCA 90 bp CCCTCCCACCATCCACCGCAGCCACTTCCGCCCGTCCTCCGGAAGTaGGCCCCGGCAACGCAGCGTTCCACATCCCGCCCATTTTTCTAC +
Preference number: 5 (lower is better)
Translates to: PSHHPPQPLPPVLRK*APATQRSTSRPFFY
Trigger: GTAGAAAAATGGGCGGGATGTGGAACGCTGCGTTGCCGGGGCCCACTTCCGGAGGACGGGCGGAAGTGGCTGCGGTGGATGGTGGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506033.1
CDS-3UTR CAA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGCTTGCCCGGCTCCCTaGCCCGCAGTCCTAGGGATG +
Preference number: 5 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPACPAP*PAVLGM
Trigger: CATCCCTAGGACTGCGGGCAAGGGAGCCGGGCAAGC...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS TCA 90 bp GAACTGCCCGTGGCTCACACCCTTGCGGCCAAAGGTCATCGTTCTTaGGATCTCAGGGCGTATGCAGGCCCGCCCCTGCCGCTGCTCCGG +
Preference number: 5 (lower is better)
Translates to: ELPVAHTLAAKGHRS*DLRAYAGPPLPLLR
Trigger: CCGGAGCAGCGGCAGGGGCGGGCCTGCATACGCCCTGAGATCTCAAGAACGATGACCTTTGGCCGCAAGGGTGTGAGCCACGGGCAGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS GCA 90 bp TGCGGTAGAGCAGCTCAGGCCTGCTGGCGTCCACCATCTGCTCCTTaGCGTTGTCATTCCAGGCCGAGACGCACCACAGGGAGGGGTCGG +
Preference number: 5 (lower is better)
Translates to: CGRAAQACWRPPSAP*RCHSRPRRTTGRGR
Trigger: CCGACCCCTCCCTGTGGTGCGTCTCGGCCTGGAATGACAACGGCAAGGAGCAGATGGTGGACGCCAGCAGGCCTGAGCTGCTCTACCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCGCTTGCCCGGCTCCCTaGCCCGCAGTCCTAGGGATG +
Preference number: 5 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGACPAP*PAVLGM
Trigger: CATCCCTAGGACTGCGGGCAAGGGAGCCGGGCAAGC...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS GCA 90 bp AAGGTCATCGTTCTTGAGATCTCAGGGCGTATGCAGGCCCGCCCCTaGCGCTGCTCCGGCCGCCGCATCCAGTCGTCCCAGAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: KVIVLEISGRMQARP*RCSGRRIQSSQKAF
Trigger: AAAGGCCTTCTGGGACGACTGGATGCGGCGGCCGGAGCAGCGGCAGGGGCGGGCCTGCATACGCCCTGAGATCTCAAGAACGATGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CCA 90 bp CCGAGACGCACCACAGGGAGGGGTCGGCCTTCAGCAGCGGATAGGTaGCCCGAAAGTACTCGAAGAAGTCCGGGGCCACCTCCAGGTCAT +
Preference number: 5 (lower is better)
Translates to: PRRTTGRGRPSAADR*PESTRRSPGPPPGH
Trigger: ATGACCTGGAGGTGGCCCCGGACTTCTTCGAGTACTTTCGGGCCACCTATCCGCTGCTGAAGGCCGACCCCTCCCTGTGGTGCGTCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CCA 90 bp AGGCAGGTGCTAATTCCAGCTAGGATCATAGCCCTCCCACGTCAGTaGGGGCGCCAGGTGGACACGGCGGCCCCGGAACTGGAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: RQVLIPARIIALPRQ*GRQVDTAAPELEGD
Trigger: GTCACCTTCCAGTTCCGGGGCCGCCGTGTCCACCTGGCGCCCCCACTGACGTGGGAGGGCTATGATCCTAGCTGGAATTAGCACCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGACTCCACCTCGGCGTCTaGGGCCAGGCGAATCACTTC +
Preference number: 5 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGLHLGV*GQANHF
Trigger: GAAGTGATTCGCCTGGCCCAAGACGCCGAGGTGGAG...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGACGTCCCAGAAGGCCTTaGGCCACTTGGGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGRPRRP*ATWAPA
Trigger: AGCTGGAGCCCAAGTGGCCAAAGGCCTTCTGGGACG...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCAAGCCCAGATGGGAGGTaGGAGCTGCTCCCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPSPDGR*ELLPRP
Trigger: TGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCT...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCTGGCCCCTCAGCCTaGGCAGGCTTCTCATGCAGG +
Preference number: 5 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGPGPSA*AGFSCR
Trigger: CCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGG...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACACCTGGCCCCTCAGCCTaGGCAGGCTTCTCATGCAGG +
Preference number: 5 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTPGPSA*AGFSCR
Trigger: CCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGG...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp TGGGCAGCACTGGGCCAGAGGCGTCCTGGTCACTGCTCCACCTGGTCACTGCTCCTTGCCTCATTGCCCTaGCAGGGAAGGCTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: WAALGQRRPGHCSTWSLLLASLP*QGRLPV
Trigger: GACAGGCAGCCTTCCCTGCAAGGGCAATGAGGCAAG...GAGCAGTGACCAGGTGGAGCAGTGACCAGGACGCCTCTGGCCCAGTGCTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS GCA 90 bp AGCCCAGGCCAGGGAAAAAGTCGGTGCGGTAGAGCAGCTCAGGCCTaGTGGCGTCCACCATCTGCTCCTTGCCGTTGTCATTCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: SPGQGKSRCGRAAQA*WRPPSAPCRCHSRP
Trigger: CGGCCTGGAATGACAACGGCAAGGAGCAGATGGTGGACGCCAGCAGGCCTGAGCTGCTCTACCGCACCGACTTTTTCCCTGGCCTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CCA 90 bp TGCCCGTATACTGCACCCGCACCTCCCCCAGCTCCTTCCGGTCATTaGTCCTCACTTTCTCCACCTGCAGCTGGGGAGCACCGTAGACGC +
Preference number: 5 (lower is better)
Translates to: CPYTAPAPPPAPSGH*SSLSPPAAGEHRRR
Trigger: GCGTCTACGGTGCTCCCCAGCTGCAGGTGGAGAAAGTGAGGACCAATGACCGGAAGGAGCTGGGGGAGGTGCGGGTGCAGTATACGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAACGTCCCAGAAGGCCTTaGGCCACTTGGGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQERPRRP*ATWAPA
Trigger: AGCTGGAGCCCAAGTGGCCAAAGGCCTTCTGGGACG...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGCGTCCCAGAAGGCCTTaGGCCACTTGGGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRRPRRP*ATWAPA
Trigger: AGCTGGAGCCCAAGTGGCCAAAGGCCTTCTGGGACG...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGACCGTGGCTCACACCCTaGCGGCCAAAGGTCATCGTT +
Preference number: 5 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGPWLTP*RPKVIV
Trigger: AACGATGACCTTTGGCCGCAAGGGTGTGAGCCACGG...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCGCCTTGGCGAAAGCCTaGAAGCTGTCCCTGCCCGTA +
Preference number: 5 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSALAKA*KLSLPV
Trigger: TACGGGCAGGGACAGCTTCAAGGCTTTCGCCAAGGC...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAGCCTTGGCGAAAGCCTaGAAGCTGTCCCTGCCCGTA +
Preference number: 5 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGALAKA*KLSLPV
Trigger: TACGGGCAGGGACAGCTTCAAGGCTTTCGCCAAGGC...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAGGGAAAGTAACAGCCTaGGCACTACCCGGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGGKVTA*ALPGPL
Trigger: AAGGGGGCCGGGTAGTGCCAAGGCTGTTACTTTCCC...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTAGGCCCAAGTCCTGCTaGCAGCAGCCCCACAGTGTT +
Preference number: 5 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPRPKSC*QQPHSV
Trigger: AACACTGTGGGGCTGCTGCAAGCAGGACTTGGGCCT...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446023.6
CDS GCA 90 bp CCCAGAGCCTTGGCGAAAGCCTTGAAGCTGTCCCTGCCCGTATACTaGACCCGCACCTCCCCCAGCTCCTTCCGGTCATTGGTCCTCACT +
Preference number: 5 (lower is better)
Translates to: PRALAKALKLSLPVY*TRTSPSSFRSLVLT
Trigger: AGTGAGGACCAATGACCGGAAGGAGCTGGGGGAGGTGCGGGTGCAGTATACGGGCAGGGACAGCTTCAAGGCTTTCGCCAAGGCTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CCA 90 bp CCAGGCCAGGGAAAAAGTCGGTGCGGTAGAGCAGCTCAGGCCTGCTaGCGTCCACCATCTGCTCCTTGCCGTTGTCATTCCAGGCCGAGA +
Preference number: 5 (lower is better)
Translates to: PGQGKSRCGRAAQAC*RPPSAPCRCHSRPR
Trigger: TCTCGGCCTGGAATGACAACGGCAAGGAGCAGATGGTGGACGCCAGCAGGCCTGAGCTGCTCTACCGCACCGACTTTTTCCCTGGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CCA 90 bp TGTGTTAACCATCCACCGCAGCCACTTCCGCCCGTCCTCCGGAAGTaGGCCCCGGCAACGCAGCGTTCCACATCCCGCCCATTTTTCTAC +
Preference number: 5 (lower is better)
Translates to: CVNHPPQPLPPVLRK*APATQRSTSRPFFY
Trigger: GTAGAAAAATGGGCGGGATGTGGAACGCTGCGTTGCCGGGGCCCACTTCCGGAGGACGGGCGGAAGTGGCTGCGGTGGATGGTTAACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510341.1
CDS-3UTR CAA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGCCTTGGCGAAAGCCTaGAAGCTGTCCCTGCCCGTA +
Preference number: 5 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRALAKA*KLSLPV
Trigger: TACGGGCAGGGACAGCTTCAAGGCTTTCGCCAAGGC...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCTCACTGGGGTTGCGTTaGGGAGTCCAAGCGCCACTG +
Preference number: 5 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGSLGLR*GVQAPL
Trigger: CAGTGGCGCTTGGACTCCCAAACGCAACCCCAGTGA...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp ATCGACCTCTCATTTCCGTCCGGCGCTGGGATCCAGGCTTCCTGCTCTGCAACTCTCCACCTCGGCGTCTaGGGCCAGGCGAATCACTTC +
Preference number: 5 (lower is better)
Translates to: IDLSFPSGAGIQASCSATLHLGV*GQANHF
Trigger: GAAGTGATTCGCCTGGCCCAAGACGCCGAGGTGGAG...AGTTGCAGAGCAGGAAGCCTGGATCCCAGCGCCGGACGGAAATGAGAGGTCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGATCTGCTCCTTGCCGTaGTCATTCCAGGCCGAGACG +
Preference number: 5 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRICSLP*SFQAET
Trigger: CGTCTCGGCCTGGAATGACAACGGCAAGGAGCAGAT...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAAATCTGCTCCTTGCCGTaGTCATTCCAGGCCGAGACG +
Preference number: 5 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQEICSLP*SFQAET
Trigger: CGTCTCGGCCTGGAATGACAACGGCAAGGAGCAGAT...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCTCCACCATCTGCTCCTaGCCGTTGTCATTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVSTICS*PLSFQA
Trigger: GGCCTGGAATGACAACGGCAAGGAGCAGATGGTGGA...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp CGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGCGTCCCAGAAGGCCTTaGGCCACTTGGGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: RKGHNAAIAGPIPRLKSRRPRRP*ATWAPA
Trigger: AGCTGGAGCCCAAGTGGCCAAAGGCCTTCTGGGACG...CCGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAATGACACCCAGAGCCTaGGCGAAAGCCTTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPMTPRA*AKALKL
Trigger: CAGCTTCAAGGCTTTCGCCAAGGCTCTGGGTGTCAT...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAGACTCCATCAGACATTaGTCTCCACTGGGGGCGACT +
Preference number: 5 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGDSIRH*SPLGAT
Trigger: AGTCGCCCCCAGTGGAGACAAATGTCTGATGGAGTC...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GAAGAACAGCTGGACCCGAGTCAGACACGCAGGTCACGGGCCCAGAGCAGGGCCTTTTTCCAGCCTCTTTaGCTGACAGGGGTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: EEQLDPSQTRRSRAQSRAFFQPL*LTGVPV
Trigger: CACAGGCACCCCTGTCAGCAAAAGAGGCTGGAAAAA...GGCCCTGCTCTGGGCCCGTGACCTGCGTGTCTGACTCGGGTCCAGCTGTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACAGCTTGCCCGGCTCCCTaGCCCGCAGTCCTAGGGATG +
Preference number: 5 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTACPAP*PAVLGM
Trigger: CATCCCTAGGACTGCGGGCAAGGGAGCCGGGCAAGC...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCAGCTCCTTCCGGTCATaGGTCCTCACTTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGSSFRS*VLTFST
Trigger: GGTGGAGAAAGTGAGGACCAATGACCGGAAGGAGCT...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGAGCTCCTTCCGGTCATaGGTCCTCACTTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRSSFRS*VLTFST
Trigger: GGTGGAGAAAGTGAGGACCAATGACCGGAAGGAGCT...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAAAGCTCCTTCCGGTCATaGGTCCTCACTTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQESSFRS*VLTFST
Trigger: GGTGGAGAAAGTGAGGACCAATGACCGGAAGGAGCT...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCGAGGAGAGGTCTTGCTaGCCCCCTTCAACTTTCCAT +
Preference number: 5 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSEERSC*PPSTFH
Trigger: ATGGAAAGTTGAAGGGGGCAAGCAAGACCTCTCCTC...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CTGGGGCAGGGCTGCTGCACTGAGGGTGCATCCCACCTCCTGCAGGGAAGGCAGTTTCTTTCCTCAACTTaGCTTCCTCCCACCCGTCTA +
Preference number: 5 (lower is better)
Translates to: LGQGCCTEGASHLLQGRQFLSST*LPPTRL
Trigger: TAGACGGGTGGGAGGAAGCAAAGTTGAGGAAAGAAA...CTGCCTTCCCTGCAGGAGGTGGGATGCACCCTCAGTGCAGCAGCCCTGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCATTAGGTTTCACCATGTaGGCCAGGATGGTCCCGAAC +
Preference number: 5 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPLGFTM*ARMVPN
Trigger: GTTCGGGACCATCCTGGCCAACATGGTGAAACCTAA...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCACAAAGGTCATCGTTCTaGAGATCTCAGGGCGTATGC +
Preference number: 5 (lower is better)
Translates to: QPGDCGPTSAHDVARRGPQRSSF*RSQGVC
Trigger: GCATACGCCCTGAGATCTCAAGAACGATGACCTTTG...TGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAAGAGGAGAGGTCTTGCTaGCCCCCTTCAACTTTCCAT +
Preference number: 5 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQEEERSC*PPSTFH
Trigger: ATGGAAAGTTGAAGGGGGCAAGCAAGACCTCTCCTC...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCGAGGAGAGGTCTTGCTaGCCCCCTTCAACTTTCCAT +
Preference number: 5 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGEERSC*PPSTFH
Trigger: ATGGAAAGTTGAAGGGGGCAAGCAAGACCTCTCCTC...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp GGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGTCACTGGGGTTGCGTTaGGGAGTCCAAGCGCCACTG +
Preference number: 5 (lower is better)
Translates to: GVWSRERTLPNSLHMLQESLGLR*GVQAPL
Trigger: CAGTGGCGCTTGGACTCCCAAACGCAACCCCAGTGA...CTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACCAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTAGCCCAGATGGGAGGTaGGAGCTGCTCCCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPSPDGR*ELLPRP
Trigger: TGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCT...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTGGCAGGCTTGCCTCATaGCCCTTGCAGGGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: KSQVREKGSGQESERCQTGRLAS*PLQGRL
Trigger: CAGCCTTCCCTGCAAGGGCAATGAGGCAAGCCTGCC...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGTTCCAAAGGAGGCTTTaGGCAGGCTTGCCTCATTGC +
Preference number: 5 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRFQRRL*AGLPHC
Trigger: GCAATGAGGCAAGCCTGCCAAAAGCCTCCTTTGGAA...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS GCA 90 bp GCTCTGTGTAGCCGTGGTGGAGGAAGGTTTTGTTTCGTTCATCGCTaGTGTTTCTCGCTGCCTCTCTTGACGAGGCAGGGCCCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: ALCSRGGGRFCFVHR*CFSLPLLTRQGPCR
Trigger: CCTGCAAGGGCCCTGCCTCGTCAAGAGAGGCAGCGAGAAACAGCAGCGATGAACGAAACAAAACCTTCCTCCACCACGGCTACACAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510962.1
ENST00000512080.1
CDS-3UTR CAA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGGTCCTGGCCCCGAACTaGGCCTGCTCCGGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLVLAPN*ACSGAQ
Trigger: CTGCGCCCCGGAGCAGGCCAAGTTCGGGGCCAGGAC...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307826.5
CDS-3UTR CAA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACACTCCACCTCGGCGTCTaGGGCCAGGCGAATCACTTC +
Preference number: 5 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTLHLGV*GQANHF
Trigger: GAAGTGATTCGCCTGGCCCAAGACGCCGAGGTGGAG...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGCAAAGGTCATCGTTCTaGAGATCTCAGGGCGTATGC +
Preference number: 5 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRQRSSF*RSQGVC
Trigger: GCATACGCCCTGAGATCTCAAGAACGATGACCTTTG...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAACAAAGGTCATCGTTCTaGAGATCTCAGGGCGTATGC +
Preference number: 5 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQEQRSSF*RSQGVC
Trigger: GCATACGCCCTGAGATCTCAAGAACGATGACCTTTG...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CGGCCCTCGACACAGCTCCCCAGACAACTCTGCCACCATCTGGTGTCGAGCTCCAACTGCTGGTTCAGCTaGATAAACTTGAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: RPSTQLPRQLCHHLVSSSNCWFS*INLRCW
Trigger: CCAGCACCTCAAGTTTATCAAGCTGAACCAGCAGTT...GGAGCTCGACACCAGATGGTGGCAGAGTTGTCTGGGGAGCTGTGTCGAGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCTCAAGAGAGCGAACGTaGCCAAACTCTCTGCACATG +
Preference number: 5 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVSRERT*PNSLHM
Trigger: CATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGA...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCCTCAGAACAATGCACTaGGCTAGCTGCATGACATGC +
Preference number: 5 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVLRTMH*ASCMTC
Trigger: GCATGTCATGCAGCTAGCCAAGTGCATTGTTCTGAG...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTCCACCTCCCACCCTCTaGGCCTGCTCTGAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPPPPTL*ACSEGF
Trigger: GAAGCCCTCAGAGCAGGCCAAGAGGGTGGGAGGTGG...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CCGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGCTGGGAGCCATGTGTaGAAGACGGCGGAACAACAA +
Preference number: 5 (lower is better)
Translates to: PERAQCSYRRADSTSEITAGSHV*KTAEQQ
Trigger: TTGTTGTTCCGCCGTCTTCAACACATGGCTCCCAGC...CGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCGGCAGGCTTGCCTCATaGCCCTTGCAGGGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: GQESERCQTLCTCSRRKLGRLAS*PLQGRL
Trigger: CAGCCTTCCCTGCAAGGGCAATGAGGCAAGCCTGCC...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS GCA 90 bp AGGAGGCAGCCATGCACCTCTGACTCACGTGTCCAAAGTGAAATTTaGAGTGCTCCTCCCAGCTCCTCTCTCAGCAGTCCCGTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: RRQPCTSDSRVQSEI*SAPPSSSLSSPVLR
Trigger: CCTGAGAACGGGACTGCTGAGAGAGGAGCTGGGAGGAGCACTGCAAATTTCACTTTGGACACGTGAGTCAGAGGTGCATGGCTGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514438.1
CDS-3UTR CAA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCCTCCACCTCGGCGTCTaGGGCCAGGCGAATCACTTC +
Preference number: 5 (lower is better)
Translates to: KKGQADRILSSTKPAGASLHLGV*GQANHF
Trigger: GAAGTGATTCGCCTGGCCCAAGACGCCGAGGTGGAG...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCAACTGCTGGTTCAGCTaGATAAACTTGAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVNCWFS*INLRCW
Trigger: CCAGCACCTCAAGTTTATCAAGCTGAACCAGCAGTT...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCAACTGCTGGTTCAGCTaGATAAACTTGAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGNCWFS*INLRCW
Trigger: CCAGCACCTCAAGTTTATCAAGCTGAACCAGCAGTT...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGAACTGCTGGTTCAGCTaGATAAACTTGAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRNCWFS*INLRCW
Trigger: CCAGCACCTCAAGTTTATCAAGCTGAACCAGCAGTT...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTGCCTTGGCGAAAGCCTaGAAGCTGTCCCTGCCCGTA +
Preference number: 5 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIALAKA*KLSLPV
Trigger: TACGGGCAGGGACAGCTTCAAGGCTTTCGCCAAGGC...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCGACAAGGAAGCCCCTTaGGTTAGTATCATTTTGGCC +
Preference number: 5 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGDKEAP*VSIILA
Trigger: GGCCAAAATGATACTAACCAAAGGGGCTTCCTTGTC...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGGCACTCTCACTGGGGTaGCGTTTGGGAGTCCAAGCG +
Preference number: 5 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWALSLG*RLGVQA
Trigger: CGCTTGGACTCCCAAACGCAACCCCAGTGAGAGTGC...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGCTGAACTCTACAGCATaGACTAACACGGGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRLNSTA*TNTGLF
Trigger: GAAAAGCCCCGTGTTAGTCAATGCTGTAGAGTTCAG...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp TTTCTGAGCCCAGATGGGAGGTTGGAGCTGCTCCCAAGGCCACGGCCCTCGACACTGAACTCTACAGCATaGACTAACACGGGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: FLSPDGRLELLPRPRPSTLNSTA*TNTGLF
Trigger: GAAAAGCCCCGTGTTAGTCAATGCTGTAGAGTTCAG...TGTCGAGGGCCGTGGCCTTGGGAGCAGCTCCAACCTCCCATCTGGGCTCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTAGCCACCACAGAAGGTaGTGTTACCCCCGCCTCACA +
Preference number: 5 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPSHHRR*CYPRLT
Trigger: TGTGAGGCGGGGGTAACACAACCTTCTGTGGTGGCT...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACAGGGAAAGTAACAGCCTaGGCACTACCCGGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTGKVTA*ALPGPL
Trigger: AAGGGGGCCGGGTAGTGCCAAGGCTGTTACTTTCCC...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGCACTGGCATGTGCCCTaGTCAGTCAGCACTTCCGGG +
Preference number: 5 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWHWHVP*SVSTSG
Trigger: CCCGGAAGTGCTGACTGACAAGGGCACATGCCAGTG...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGCTTGCCTCATTGCCCTaGCAGGGAAGGCTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWLASLP*QGRLPV
Trigger: GACAGGCAGCCTTCCCTGCAAGGGCAATGAGGCAAG...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGAAATACTATCCCATCTCTaGCTCAGGCAGGGGAAGTTA +
Preference number: 5 (lower is better)
Translates to: LGTVVPPQLMMWQGGAQEILSHL*LRQGKL
Trigger: TAACTTCCCCTGCCTGAGCAAGAGATGGGATAGTAT...TTCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS GCA 90 bp GCCCAGGAGGCAGATTTCTCTGACTCACGTGTCCAAAGTGAAATTTaGAGTGCTCCTCCCAGCTCCTCTCTCAGCAGTCCCGTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: AQEADFSDSRVQSEI*SAPPSSSLSSPVLR
Trigger: CCTGAGAACGGGACTGCTGAGAGAGGAGCTGGGAGGAGCACTGCAAATTTCACTTTGGACACGTGAGTCAGAGAAATCTGCCTCCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333055.8
ENST00000513149.1
CDS-3UTR CAA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGGCTTGCCCGGCTCCCTaGCCCGCAGTCCTAGGGATG +
Preference number: 5 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRACPAP*PAVLGM
Trigger: CATCCCTAGGACTGCGGGCAAGGGAGCCGGGCAAGC...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCACCATCTGCTCCTaGCCGTTGTCATTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GKKGQADRILSSTKPAGASTICS*PLSFQA
Trigger: GGCCTGGAATGACAACGGCAAGGAGCAGATGGTGGA...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACCCGTGGCTCACACCCTaGCGGCCAAAGGTCATCGTT +
Preference number: 5 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHPWLTP*RPKVIV
Trigger: AACGATGACCTTTGGCCGCAAGGGTGTGAGCCACGG...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGCCGTGGCTCACACCCTaGCGGCCAAAGGTCATCGTT +
Preference number: 5 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWPWLTP*RPKVIV
Trigger: AACGATGACCTTTGGCCGCAAGGGTGTGAGCCACGG...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp TCGTCTCCGTTTCCCTGGCCCCTCAGCCTTGGCAGGCTTCTCATGCAGGGCCCATTCAGCTTGATAAACTaGAGGTGCTGGTCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: SSPFPWPLSLGRLLMQGPFSLIN*RCWSKN
Trigger: GTTCTTTGACCAGCACCTCAAGTTTATCAAGCTGAA...TGGGCCCTGCATGAGAAGCCTGCCAAGGCTGAGGGGCCAGGGAAACGGAGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCCCAGGATTCAGCTTGATAAACTaGAGGTGCTGGTCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: PGDCGPTSAHDVARRGPGFSLIN*RCWSKN
Trigger: GTTCTTTGACCAGCACCTCAAGTTTATCAAGCTGAA...TCCTGGGCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTCCACCTGAGCAAGCCTaGATGGGTGAATACCAGGAG +
Preference number: 5 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPPPEQA*MGEYQE
Trigger: CTCCTGGTATTCACCCATCAAGGCTTGCTCAGGTGG...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CGGAAAGGGCACAATGCAGCTATCGCCGGGCCGATTCCACGTCTGAAATCACGGATCTGGCATTTCCACTaGCTTTGGTATCCACAGGCG +
Preference number: 5 (lower is better)
Translates to: RKGHNAAIAGPIPRLKSRIWHFH*LWYPQA
Trigger: CGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGAT...CCGTGATTTCAGACGTGGAATCGGCCCGGCGATAGCTGCATTGTGCCCTTTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGAGCCACCACAGAAGGTaGTGTTACCCCCGCCTCACA +
Preference number: 5 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWSHHRR*CYPRLT
Trigger: TGTGAGGCGGGGGTAACACAACCTTCTGTGGTGGCT...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTGTGCTGAGACGTTTTaGGCTGGGGCAGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: KKGQADRILSSTKPAGASCAETF*AGAGLL
Trigger: CAGCAGCCCTGCCCCAGCCAAAAACGTCTCAGCACA...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS TCA 90 bp TTATCCACTGTGAGAACTGGCCCATCTGTCTTGTGCTGGGGCTCATaGGAAGAAACAGGCCTTAGAAGCGGCATGGCCCAGGAGGCAGAT +
Preference number: 5 (lower is better)
Translates to: LSTVRTGPSVLCWGS*EETGLRSGMAQEAD
Trigger: ATCTGCCTCCTGGGCCATGCCGCTTCTAAGGCCTGTTTCTTCTCATGAGCCCCAGCACAAGACAGATGGGCCAGTTCTCACAGTGGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
ENST00000504385.5
ENST00000506708.1
ENST00000506889.1
ENST00000508090.1
ENST00000508702.1
ENST00000510341.1
ENST00000510962.1
ENST00000512080.1
ENST00000513149.1
CDS GCA 90 bp GCTACTCCCGAGAACACTCTCCTGGAATGTTTAAGGCCCAAGTCCTaGTTGCAGCAGCCCCACAGTGTTCCCATTTCTCAGCCCGAAAAC +
Preference number: 5 (lower is better)
Translates to: ATPENTLLECLRPKS*LQQPHSVPISQPEN
Trigger: GTTTTCGGGCTGAGAAATGGGAACACTGTGGGGCTGCTGCAAGCAGGACTTGGGCCTTAAACATTCCAGGAGAGTGTTCTCGGGAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446023.6
ENST00000504385.5
ENST00000506708.1
CDS-3UTR CAA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTCCACCATCTGCTCCTaGCCGTTGTCATTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: KKGQADRILSSTKPAGASSTICS*PLSFQA
Trigger: GGCCTGGAATGACAACGGCAAGGAGCAGATGGTGGA...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp CCGATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGTTCAGCTTGATAAACTaGAGGTGCTGGTCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: PMQPGDCGPTSAHDVARRFSLIN*RCWSKN
Trigger: GTTCTTTGACCAGCACCTCAAGTTTATCAAGCTGAA...CCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTATGACACCCAGAGCCTaGGCGAAAGCCTTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIMTPRA*AKALKL
Trigger: CAGCTTCAAGGCTTTCGCCAAGGCTCTGGGTGTCAT...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACAGACTCCATCAGACATTaGTCTCCACTGGGGGCGACT +
Preference number: 5 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTDSIRH*SPLGAT
Trigger: AGTCGCCCCCAGTGGAGACAAATGTCTGATGGAGTC...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS GCA 90 bp TGGGTGAAGTGCACAAACTGCTGGTTCAGCTTGATAAACTTGAGGTaGTGGTCAAAGAACTGCCCGTGGCTCACACCCTTGCGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: WVKCTNCWFSLINLR*WSKNCPWLTPLRPK
Trigger: CTTTGGCCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCACCTCAAGTTTATCAAGCTGAACCAGCAGTTTGTGCACTTCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS GCA 90 bp GTCCTAGGGATGCCTCCTCTGGACTATGGGATTAGGAGGCAGCCATaGACCTCTGACTCACGTGTCCAAAGTGAAATTTGCAGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: VLGMPPLDYGIRRQP*TSDSRVQSEICSAP
Trigger: AGGAGCACTGCAAATTTCACTTTGGACACGTGAGTCAGAGGTGCATGGCTGCCTCCTAATCCCATAGTCCAGAGGAGGCATCCCTAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514438.1
CDS CCA 90 bp GTGAAGTGCACAAACTGCTGGTTCAGCTTGATAAACTTGAGGTGCTaGTCAAAGAACTGCCCGTGGCTCACACCCTTGCGGCCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: VKCTNCWFSLINLRC*SKNCPWLTPLRPKV
Trigger: GACCTTTGGCCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCACCTCAAGTTTATCAAGCTGAACCAGCAGTTTGTGCACTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CCA 90 bp ATCCCATCTCTTGCTCAGGCAGGGGAAGTTATCCACTGTGAGAACTaGCCCATCTGTCTTGTGCTGGGGCTCATGAGAAGAAACAGGCCT +
Preference number: 5 (lower is better)
Translates to: IPSLAQAGEVIHCEN*PICLVLGLMRRNRP
Trigger: AGGCCTGTTTCTTCTCATGAGCCCCAGCACAAGACAGATGGGCCAGTTCTCACAGTGGATAACTTCCCCTGCCTGAGCAAGAGATGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
ENST00000504385.5
ENST00000506708.1
ENST00000506889.1
ENST00000508090.1
ENST00000508702.1
ENST00000510341.1
ENST00000510962.1
ENST00000512080.1
ENST00000513149.1
CDS-3UTR CAA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGCCGTGGCTCACACCCTaGCGGCCAAAGGTCATCGTT +
Preference number: 5 (lower is better)
Translates to: IKKINAPKRETQAGRCSLPWLTP*RPKVIV
Trigger: AACGATGACCTTTGGCCGCAAGGGTGTGAGCCACGG...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCAGCTCCTTCCGGTCATaGGTCCTCACTTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: KKGQADRILSSTKPAGASSSFRS*VLTFST
Trigger: GGTGGAGAAAGTGAGGACCAATGACCGGAAGGAGCT...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGGCCTTGGCGAAAGCCTaGAAGCTGTCCCTGCCCGTA +
Preference number: 5 (lower is better)
Translates to: IKKINAPKRETQAGRCSLALAKA*KLSLPV
Trigger: TACGGGCAGGGACAGCTTCAAGGCTTTCGCCAAGGC...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGATGACACCCAGAGCCTaGGCGAAAGCCTTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: HQLHQALTRKPLWLVSFWMTPRA*AKALKL
Trigger: CAGCTTCAAGGCTTTCGCCAAGGCTCTGGGTGTCAT...CCAAAATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp GCAGTGAGCCCCGATGACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTGGGAGAATAATCCTCTaGTTATCATTTGTGCACTTA +
Preference number: 5 (lower is better)
Translates to: AVSPDDPPTPPGPDKEAPGRIIL*LSFVHL
Trigger: TAAGTGCACAAATGATAACAAGAGGATTATTCTCCC...AGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTCATCGGGGCTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCTTGGTTAGTATCATTTaGGCCACAAATATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVLVSII*ATNMSP
Trigger: AGGGGACATATTTGTGGCCAAAATGATACTAACCAA...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCGAGGAGAGGTCTTGCTaGCCCCCTTCAACTTTCCAT +
Preference number: 5 (lower is better)
Translates to: GKKGQADRILSSTKPAGAEERSC*PPSTFH
Trigger: ATGGAAAGTTGAAGGGGGCAAGCAAGACCTCTCCTC...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTCTCAGAACAATGCACTaGGCTAGCTGCATGACATGC +
Preference number: 5 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPLRTMH*ASCMTC
Trigger: GCATGTCATGCAGCTAGCCAAGTGCATTGTTCTGAG...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CGTTTCACATTGCCCACCATTTGTGAGTCAGAAATTCAGGCAGCCCTCGGCTGGGCATTTCCACTTGCTTaGGTATCCACAGGCGCTTCC +
Preference number: 5 (lower is better)
Translates to: RFTLPTICESEIQAALGWAFPLA*VSTGAS
Trigger: GGAAGCGCCTGTGGATACCAAAGCAAGTGGAAATGC...CCAGCCGAGGGCTGCCTGAATTTCTGACTCACAAATGGTGGGCAATGTGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACGTCACTGTCACAAGCTaGGTCTTCCAGGCACCGTGT +
Preference number: 5 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHVTVTS*VFQAPC
Trigger: ACACGGTGCCTGGAAGACCAAGCTTGTGACAGTGAC...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGTGTGCTGAGACGTTTTaGGCTGGGGCAGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: IKKINAPKRETQAGRCSLCAETF*AGAGLL
Trigger: CAGCAGCCCTGCCCCAGCCAAAAACGTCTCAGCACA...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS GCA 90 bp AACTGCTGGTTCAGCTTGATAAACTTGAGGTGCTGGTCAAAGAACTaGCCGTGGCTCACACCCTTGCGGCCAAAGGTCATCGTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: NCWFSLINLRCWSKN*PWLTPLRPKVIVLE
Trigger: CTCAAGAACGATGACCTTTGGCCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCACCTCAAGTTTATCAAGCTGAACCAGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CCA 90 bp TCTTGTGCTGGGGCTCATGAGAAGAAACAGGCCTTAGAAGCGGCATaGCCCAGGAGGCAGATTTCTCTGACTCACGTGTCCAAAGTGAAA +
Preference number: 5 (lower is better)
Translates to: SCAGAHEKKQALEAA*PRRQISLTHVSKVK
Trigger: TTTCACTTTGGACACGTGAGTCAGAGAAATCTGCCTCCTGGGCCATGCCGCTTCTAAGGCCTGTTTCTTCTCATGAGCCCCAGCACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333055.8
ENST00000513149.1
CDS-3UTR CAA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGTCCACCATCTGCTCCTaGCCGTTGTCATTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: IKKINAPKRETQAGRCSLSTICS*PLSFQA
Trigger: GGCCTGGAATGACAACGGCAAGGAGCAGATGGTGGA...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCCGTCCCAGAAGGCCTTaGGCCACTTGGGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: GKIKKINAPKRETQAGRCRPRRP*ATWAPA
Trigger: AGCTGGAGCCCAAGTGGCCAAAGGCCTTCTGGGACG...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp GAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACACAAAGGTCATCGTTCTaGAGATCTCAGGGCGTATGC +
Preference number: 5 (lower is better)
Translates to: ERCQTLCTCSRRKLRTWTQRSSF*RSQGVC
Trigger: GCATACGCCCTGAGATCTCAAGAACGATGACCTTTG...TGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp ATGCAGCCTGGGGACTGTGGTCCCACCTCAGCTCATGATGTGGCAAGGAGGGGCGGGAGAATAATCCTCTaGTTATCATTTGTGCACTTA +
Preference number: 5 (lower is better)
Translates to: MQPGDCGPTSAHDVARRGGRIIL*LSFVHL
Trigger: TAAGTGCACAAATGATAACAAGAGGATTATTCTCCC...GCCCCTCCTTGCCACATCATGAGCTGAGGTGGGACCACAGTCCCCAGGCTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp ATAGAAGGAGGGCTCGTGCCCTGGCTGGAAGAGCCAGGTCAGGGAGAAGGGGTCGGGAGAATAATCCTCTaGTTATCATTTGTGCACTTA +
Preference number: 5 (lower is better)
Translates to: IEGGLVPWLEEPGQGEGVGRIIL*LSFVHL
Trigger: TAAGTGCACAAATGATAACAAGAGGATTATTCTCCC...GACCCCTTCTCCCTGACCTGGCTCTTCCAGCCAGGGCACGAGCCCTCCTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCTCAAGAGAGCGAACGTaGCCAAACTCTCTGCACATG +
Preference number: 5 (lower is better)
Translates to: GQESERCQTLCTCSRRKLSRERT*PNSLHM
Trigger: CATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGA...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTTTTTCCAGCCTCTTTaGCTGACAGGGGTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: KKGQADRILSSTKPAGASFFQPL*LTGVPV
Trigger: CACAGGCACCCCTGTCAGCAAAAGAGGCTGGAAAAA...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS GCA 90 bp CAGATTTCTGTGTTAACCTCTGACTCACGTGTCCAAAGTGAAATTTaGAGTGCTCCTCCCAGCTCCTCTCTCAGCAGTCCCGTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: QISVLTSDSRVQSEI*SAPPSSSLSSPVLR
Trigger: CCTGAGAACGGGACTGCTGAGAGAGGAGCTGGGAGGAGCACTGCAAATTTCACTTTGGACACGTGAGTCAGAGGTTAACACAGAAATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508090.1
CDS CCA 90 bp TGGTTCAGCTTGATAAACTTGAGGTGCTGGTCAAAGAACTGCCCGTaGCTCACACCCTTGCGGCCAAAGGTCATCGTTCTTGAGATCTCA +
Preference number: 5 (lower is better)
Translates to: WFSLINLRCWSKNCP*LTPLRPKVIVLEIS
Trigger: TGAGATCTCAAGAACGATGACCTTTGGCCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCACCTCAAGTTTATCAAGCTGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGATCTGCTCCTTGCCGTaGTCATTCCAGGCCGAGACG +
Preference number: 5 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRICSLP*SFQAET
Trigger: CGTCTCGGCCTGGAATGACAACGGCAAGGAGCAGAT...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCCCGTGGCTCACACCCTaGCGGCCAAAGGTCATCGTT +
Preference number: 5 (lower is better)
Translates to: GKIKKINAPKRETQAGRCPWLTP*RPKVIV
Trigger: AACGATGACCTTTGGCCGCAAGGGTGTGAGCCACGG...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTAACTGCTGGTTCAGCTaGATAAACTTGAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIINCWFS*INLRCW
Trigger: CCAGCACCTCAAGTTTATCAAGCTGAACCAGCAGTT...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTTCAAGAGAGCGAACGTaGCCAAACTCTCTGCACATG +
Preference number: 5 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPSRERT*PNSLHM
Trigger: CATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGA...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCGACAAGGAAGCCCCTTaGGTTAGTATCATTTTGGCC +
Preference number: 5 (lower is better)
Translates to: GQESERCQTLCTCSRRKLDKEAP*VSIILA
Trigger: GGCCAAAATGATACTAACCAAAGGGGCTTCCTTGTC...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGGACAAGGAAGCCCCTTaGGTTAGTATCATTTTGGCC +
Preference number: 5 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWDKEAP*VSIILA
Trigger: GGCCAAAATGATACTAACCAAAGGGGCTTCCTTGTC...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp ATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCAGCCTGCCACCTGAGCAAGCCTaGATGGGTGAATACCAGGAG +
Preference number: 5 (lower is better)
Translates to: IKKINAPKRETQAGRCSLPPEQA*MGEYQE
Trigger: CTCCTGGTATTCACCCATCAAGGCTTGCTCAGGTGG...CAGGCTGCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp AAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTATCTGGCATTTCCACTaGCTTTGGTATCCACAGGCG +
Preference number: 5 (lower is better)
Translates to: KRDRQIEFCLLPSQQEPPIWHFH*LWYPQA
Trigger: CGCCTGTGGATACCAAAGCAAGTGGAAATGCCAGAT...AGGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GGTTTCTCAAACAACCCACTAGGGTTAGGGGCCCGCAGGTTTCATTCTGCCCCTAATACCCGTTTCACATaGCCCACCATTTGTGAGTCA +
Preference number: 5 (lower is better)
Translates to: GFSNNPLGLGARRFHSAPNTRFT*PTICES
Trigger: TGACTCACAAATGGTGGGCAATGTGAAACGGGTATT...AGGGGCAGAATGAAACCTGCGGGCCCCTAACCCTAGTGGGTTGTTTGAGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GGTCAAGAGAGCGAACGTTGCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCATACTATCCCATCTCTaGCTCAGGCAGGGGAAGTTA +
Preference number: 5 (lower is better)
Translates to: GQESERCQTLCTCSRRKLILSHL*LRQGKL
Trigger: TAACTTCCCCTGCCTGAGCAAGAGATGGGATAGTAT...GAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS TCA 90 bp AGATACTATCCCATCTCTTGCTCAGGCAGGGGAAGTTATCCACTGTaGGAACTGGCCCATCTGTCTTGTGCTGGGGCTCATGAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: RYYPISCSGRGSYPL*ELAHLSCAGAHEKK
Trigger: TTTCTTCTCATGAGCCCCAGCACAAGACAGATGGGCCAGTTCTCACAGTGGATAACTTCCCCTGCCTGAGCAAGAGATGGGATAGTATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
ENST00000504385.5
ENST00000506708.1
ENST00000506889.1
ENST00000508090.1
ENST00000508702.1
ENST00000510341.1
ENST00000510962.1
ENST00000512080.1
ENST00000513149.1
CDS-3UTR CAA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCATCTGCTCCTTGCCGTaGTCATTCCAGGCCGAGACG +
Preference number: 5 (lower is better)
Translates to: GKIKKINAPKRETQAGRCICSLP*SFQAET
Trigger: CGTCTCGGCCTGGAATGACAACGGCAAGGAGCAGAT...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCTCCACCATCTGCTCCTaGCCGTTGTCATTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GKIKKINAPKRETQAGRCSTICS*PLSFQA
Trigger: GGCCTGGAATGACAACGGCAAGGAGCAGATGGTGGA...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGATGACACCCAGAGCCTaGGCGAAAGCCTTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRMTPRA*AKALKL
Trigger: CAGCTTCAAGGCTTTCGCCAAGGCTCTGGGTGTCAT...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp TTCATTCCAATCCGGCTCTCCCTCAACCATCTGTGTGACCTTGGGCAACTTCACGACAAGGAAGCCCCTTaGGTTAGTATCATTTTGGCC +
Preference number: 5 (lower is better)
Translates to: FIPIRLSLNHLCDLGQLHDKEAP*VSIILA
Trigger: GGCCAAAATGATACTAACCAAAGGGGCTTCCTTGTC...GTGAAGTTGCCCAAGGTCACACAGATGGTTGAGGGAGAGCCGGATTGGAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTTTCTTTCCTCAACTTaGCTTCCTCCCACCCGTCTA +
Preference number: 5 (lower is better)
Translates to: KKGQADRILSSTKPAGASFLSST*LPPTRL
Trigger: TAGACGGGTGGGAGGAAGCAAAGTTGAGGAAAGAAA...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp AAGAGCCAGGTCAGGGAGAAGGGGTCTGGTCAAGAGAGCGAACGTTGCCAAACTGTCACAAAAAGCGTTTaGTTTTTCCGAGACAGAGTC +
Preference number: 5 (lower is better)
Translates to: KSQVREKGSGQESERCQTVTKSV*FFRDRV
Trigger: GACTCTGTCTCGGAAAAACAAAACGCTTTTTGTGAC...AGTTTGGCAACGTTCGCTCTCTTGACCAGACCCCTTCTCCCTGACCTGGCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGGTCACTGTCACAAGCTaGGTCTTCCAGGCACCGTGT +
Preference number: 5 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLVTVTS*VFQAPC
Trigger: ACACGGTGCCTGGAAGACCAAGCTTGTGACAGTGAC...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GCCAAACTCTCTGCACATGCTCCAGGAGAAAGCTCAGGACGTGGACATTTCTGGAATACCCGTTTCACATaGCCCACCATTTGTGAGTCA +
Preference number: 5 (lower is better)
Translates to: AKLSAHAPGESSGRGHFWNTRFT*PTICES
Trigger: TGACTCACAAATGGTGGGCAATGTGAAACGGGTATT...CCAGAAATGTCCACGTCCTGAGCTTTCTCCTGGAGCATGTGCAGAGAGTTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS TCA 90 bp GCTCAACACCTTCTGCACAGGCACAGCAAGACATTAAGTGGGAAATaGGACAGGAGCCTTACCTTTCTTCTCTTGTCTCAGTTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: AQHLLHRHSKTLSGK*DRSLTFLLLSQLLS
Trigger: GGAGAGCAACTGAGACAAGAGAAGAAAGGTAAGGCTCCTGTCTCATTTCCCACTTAATGTCTTGCTGTGCCTGTGCAGAAGGTGTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502678.1
CDS-3UTR CAA 90 bp GGGAAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTTCAGCTTGATAAACTaGAGGTGCTGGTCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: GKKGQADRILSSTKPAGAFSLIN*RCWSKN
Trigger: GTTCTTTGACCAGCACCTCAAGTTTATCAAGCTGAA...GGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCATGACACCCAGAGCCTaGGCGAAAGCCTTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GKIKKINAPKRETQAGRCMTPRA*AKALKL
Trigger: CAGCTTCAAGGCTTTCGCCAAGGCTCTGGGTGTCAT...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS-3UTR CAA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTGTCACAAAAAGCGTTTaGTTTTTCCGAGACAGAGTC +
Preference number: 5 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIVTKSV*FFRDRV
Trigger: GACTCTGTCTCGGAAAAACAAAACGCTTTTTGTGAC...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp AGAGGTAACAGTCTGTCTGTGTTCTGGGTATTAGCAAAACAGGCACTCTCACTGCAAAGGTCATCGTTCTaGAGATCTCAGGGCGTATGC +
Preference number: 5 (lower is better)
Translates to: RGNSLSVFWVLAKQALSLQRSSF*RSQGVC
Trigger: GCATACGCCCTGAGATCTCAAGAACGATGACCTTTG...CAGTGAGAGTGCCTGTTTTGCTAATACCCAGAACACAGACAGACTGTTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp AAAAAGGGACAGGCAGATCGAATTCTGTCTTCTACCAAGCCAGCAGGAGCCTCCTTCAGCTTGATAAACTaGAGGTGCTGGTCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: KKGQADRILSSTKPAGASFSLIN*RCWSKN
Trigger: GTTCTTTGACCAGCACCTCAAGTTTATCAAGCTGAA...GGAGGCTCCTGCTGGCTTGGTAGAAGACAGAATTCGATCTGCCTGTCCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTTTGGTTAGTATCATTTaGGCCACAAATATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIILVSII*ATNMSP
Trigger: AGGGGACATATTTGTGGCCAAAATGATACTAACCAA...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGGAAACTCTCAGAATGTaGCACGTGATATGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQETLRM*HVICRG
Trigger: ACCTCTGCATATCACGTGCAACATTCTGAGAGTTTC...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAGCTGGGAGCCATGTGTaGAAGACGGCGGAACAACAA +
Preference number: 5 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRAGSHV*KTAEQQ
Trigger: TTGTTGTTCCGCCGTCTTCAACACATGGCTCCCAGC...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GACCCACCAACTCCACCAGGCCCTGACAAGGAAGCCCCTTTGGTTAGTATCATTGGGAGAATAATCCTCTaGTTATCATTTGTGCACTTA +
Preference number: 5 (lower is better)
Translates to: DPPTPPGPDKEAPLVSIIGRIIL*LSFVHL
Trigger: TAAGTGCACAAATGATAACAAGAGGATTATTCTCCC...AATGATACTAACCAAAGGGGCTTCCTTGTCAGGGCCTGGTGGAGTTGGTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS-3UTR CAA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGATTAGGTTTCACCATGTaGGCCAGGATGGTCCCGAAC +
Preference number: 5 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRLGFTM*ARMVPN
Trigger: GTTCGGGACCATCCTGGCCAACATGGTGAAACCTAA...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGATTCCAAAGGAGGCTTTaGGCAGGCTTGCCTCATTGC +
Preference number: 5 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRFQRRL*AGLPHC
Trigger: GCAATGAGGCAAGCCTGCCAAAAGCCTCCTTTGGAA...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGATCAAGAGAGCGAACGTaGCCAAACTCTCTGCACATG +
Preference number: 5 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRSRERT*PNSLHM
Trigger: CATGTGCAGAGAGTTTGGCAACGTTCGCTCTCTTGA...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GAACACAGTATCCGAGAGTTCTGGTTTCTACTGTTGCTCAGCAAACTCCCGCAGTTGGTTAGTATCATTTaGGCCACAAATATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: EHSIREFWFLLLLSKLPQLVSII*ATNMSP
Trigger: AGGGGACATATTTGTGGCCAAAATGATACTAACCAA...CTGCGGGAGTTTGCTGAGCAACAGTAGAAACCAGAACTCTCGGATACTGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp GGAAAAATCAAAAAGATAAATGCACCTAAGAGGGAAACACAGGCAGGCCGATGCGAAACTCTCAGAATGTaGCACGTGATATGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: GKIKKINAPKRETQAGRCETLRM*HVICRG
Trigger: ACCTCTGCATATCACGTGCAACATTCTGAGAGTTTC...GCATCGGCCTGCCTGTGTTTCCCTCTTAGGTGCATTTATCTTTTTGATTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307826.5
ENST00000333055.8
CDS-3UTR CAA 90 bp CATTCTGGTCACATAAAATCTTCCACCGTTTCAAGGACAGAACACAGTATCCGAATACTATCCCATCTCTaGCTCAGGCAGGGGAAGTTA +
Preference number: 5 (lower is better)
Translates to: HSGHIKSSTVSRTEHSIRILSHL*LRQGKL
Trigger: TAACTTCCCCTGCCTGAGCAAGAGATGGGATAGTAT...TCGGATACTGTGTTCTGTCCTTGAAACGGTGGAAGATTTTATGTGACCAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333055.8
CDS-3UTR CAA 90 bp CCCTTCAACTTTCCATCTCAGAACTATAAACTGCTAGGCTGCAAGGAGAGAAGGTTGGTTAGTATCATTTaGGCCACAAATATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: PFNFPSQNYKLLGCKERRLVSII*ATNMSP
Trigger: AGGGGACATATTTGTGGCCAAAATGATACTAACCAA...CCTTCTCTCCTTGCAGCCTAGCAGTTTATAGTTCTGAGATGGAAAGTTGAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
CDS GCA 72 bp CGCCCGCGCTGCCCTCTGACAGGTGCTGTTGGTACCTaGGGCCGGGCCCGCCGTCGCCGGCGCGTGAACGGC +
Preference number: 6 (lower is better)
Translates to: RPRCPLTGAVGT*GRARRRRRVNG
Trigger: GCCGTTCACGCGCCGGCGACGGCGGGCCCGGCCGCAGGTACCAACAGCACCTGTCAGAGGGCAGCGCGGGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510962.1
CDS CCA 72 bp CAGGGTGCGCCCGCGCTGCCCTCTGACAGGTGCTGTTaGTACCTGCGGCCGGGCCCGCCGTCGCCGGCGCGT +
Preference number: 6 (lower is better)
Translates to: QGAPALPSDRCC*YLRPGPPSPAR
Trigger: ACGCGCCGGCGACGGCGGGCCCGGCCGCAGGTACCAACAGCACCTGTCAGAGGGCAGCGCGGGCGCACCCTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510962.1
ENST00000512080.1
CDS CAA 90 bp GGAGGCAGCCATGCACCAGGTCCTCCCGACGTCCTGGCCCCGAACTaGGCCTGCTCCGGGGCGCAGGGAGCGAGCCCGGTGCCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: GGSHAPGPPDVLAPN*ACSGAQGASPVPRR
Trigger: GCGCCTGGGCACCGGGCTCGCTCCCTGCGCCCCGGAGCAGGCCAAGTTCGGGGCCAGGACGTCGGGAGGACCTGGTGCATGGCTGCCTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307826.5
CDS TCA 72 bp GGCAGGGCCCTTGCAGGGTGCGCCCGCGCTGCCCTCTaGCAGGTGCTGTTGGTACCTGCGGCCGGGCCCGCC +
Preference number: 6 (lower is better)
Translates to: GRALAGCARAAL*QVLLVPAAGPA
Trigger: GGCGGGCCCGGCCGCAGGTACCAACAGCACCTGTCAGAGGGCAGCGCGGGCGCACCCTGCAAGGGCCCTGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510962.1
ENST00000512080.1
CDS GCA 72 bp CCCTTGCAGGGTGCGCCCGCGCTGCCCTCTGACAGGTaGTGTTGGTACCTGCGGCCGGGCCCGCCGTCGCCG +
Preference number: 6 (lower is better)
Translates to: PLQGAPALPSDR*CWYLRPGPPSP
Trigger: CGGCGACGGCGGGCCCGGCCGCAGGTACCAACAGCACCTGTCAGAGGGCAGCGCGGGCGCACCCTGCAAGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510962.1
ENST00000512080.1
CDS CCA 72 bp CAGGCTCAGGTCCTCCCGACGTCCTGGCCCCGAACTTaGCCTGCTCCGGGGCGCAGGGAGCGAGCCCGGTGC +
Preference number: 6 (lower is better)
Translates to: QAQVLPTSWPRT*PAPGRRERARC
Trigger: GCACCGGGCTCGCTCCCTGCGCCCCGGAGCAGGCCAAGTTCGGGGCCAGGACGTCGGGAGGACCTGAGCCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504671.1
ENST00000505682.1
ENST00000507384.1
CDS CAA 72 bp CCAGGCTCAGGTCCTCCCGACGTCCTGGCCCCGAACTaGGCCTGCTCCGGGGCGCAGGGAGCGAGCCCGGTG +
Preference number: 6 (lower is better)
Translates to: PGSGPPDVLAPN*ACSGAQGASPV
Trigger: CACCGGGCTCGCTCCCTGCGCCCCGGAGCAGGCCAAGTTCGGGGCCAGGACGTCGGGAGGACCTGAGCCTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504671.1
ENST00000505682.1
ENST00000507384.1
CDS CAA 90 bp TGCTCTCTGCCAGGCTCAGGTCCTCCCGACGTCCTGGCCCCGAACTaGGCCTGCTCCGGGGCGCAGGGAGCGAGCCCGGTGCCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: CSLPGSGPPDVLAPN*ACSGAQGASPVPRR
Trigger: GCGCCTGGGCACCGGGCTCGCTCCCTGCGCCCCGGAGCAGGCCAAGTTCGGGGCCAGGACGTCGGGAGGACCTGAGCCTGGCAGAGAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504671.1
ENST00000505682.1
ENST00000507384.1
CDS CCA 72 bp ATGCACCAGGTCCTCCCGACGTCCTGGCCCCGAACTTaGCCTGCTCCGGGGCGCAGGGAGCGAGCCCGGTGC +
Preference number: 6 (lower is better)
Translates to: MHQVLPTSWPRT*PAPGRRERARC
Trigger: GCACCGGGCTCGCTCCCTGCGCCCCGGAGCAGGCCAAGTTCGGGGCCAGGACGTCGGGAGGACCTGGTGCAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307826.5
CDS CAA 72 bp CATGCACCAGGTCCTCCCGACGTCCTGGCCCCGAACTaGGCCTGCTCCGGGGCGCAGGGAGCGAGCCCGGTG +
Preference number: 6 (lower is better)
Translates to: HAPGPPDVLAPN*ACSGAQGASPV
Trigger: CACCGGGCTCGCTCCCTGCGCCCCGGAGCAGGCCAAGTTCGGGGCCAGGACGTCGGGAGGACCTGGTGCATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307826.5
CDS CAA 90 bp CTGCTGCAGCAGCCCACGCTGCCGCTCCAGCTCCACCTCGGCGTCTaGGGCCAGGCGAATCACTTCCCGGGTGAGGCTGGCGGGGTCGCC +
Preference number: 6 (lower is better)
Translates to: LLQQPTLPLQLHLGV*GQANHFPGEAGGVA
Trigger: GGCGACCCCGCCAGCCTCACCCGGGAAGTGATTCGCCTGGCCCAAGACGCCGAGGTGGAGCTGGAGCGGCAGCGTGGGCTGCTGCAGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000502678.1
ENST00000504671.1
ENST00000506269.1
ENST00000506889.1
ENST00000512695.1
ENST00000513431.5
ENST00000514283.1
ENST00000514438.1
CDS TCA 72 bp CCGCAATGCTGCTCAGGTCGGGCTGCCGGATGTGCGTaGCCGCGCTGCCGTAGGAGGCGATGGCCTGGGCCG +
Preference number: 6 (lower is better)
Translates to: PQCCSGRAAGCA*PRCRRRRWPGP
Trigger: CGGCCCAGGCCATCGCCTCCTACGGCAGCGCGGTCACGCACATCCGGCAGCCCGACCTGAGCAGCATTGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000504671.1
CDS GCA 72 bp CTCCCCCGCTGGCTCGACAGGGCATCCCCGATCTGCTaGAGCAGCCCACGCTGCCGCTCCAGCTCCACCTCG +
Preference number: 6 (lower is better)
Translates to: LPRWLDRASPIC*SSPRCRSSSTS
Trigger: CGAGGTGGAGCTGGAGCGGCAGCGTGGGCTGCTGCAGCAGATCGGGGATGCCCTGTCGAGCCAGCGGGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000502678.1
ENST00000504671.1
ENST00000506269.1
ENST00000506889.1
ENST00000512695.1
ENST00000513431.5
ENST00000514283.1
ENST00000514438.1
CDS GCA 72 bp GAGATCTCAGGGCGTATGCAGGCCCGCCCCTGCCGCTaGTCCGGCCGCCGCATCCAGTCGTCCCAGAAGGCC +
Preference number: 6 (lower is better)
Translates to: EISGRMQARPCR*SGRRIQSSQKA
Trigger: GGCCTTCTGGGACGACTGGATGCGGCGGCCGGAGCAGCGGCAGGGGCGGGCCTGCATACGCCCTGAGATCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CCA 72 bp CCTGCTCTCTGCCAGGCTCAGGTCCTCCCGACGTCCTaGCCCCGAACTTGGCCTGCTCCGGGGCGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: PALCQAQVLPTS*PRTWPAPGRRE
Trigger: CTCCCTGCGCCCCGGAGCAGGCCAAGTTCGGGGCCAGGACGTCGGGAGGACCTGAGCCTGGCAGAGAGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504671.1
ENST00000505682.1
ENST00000507384.1
CDS CAA 90 bp CACCGGGGAGGGCAGGCCAGGGGACGGTTCAAGGCTGCCCTGGGCTaGCCCGGCTCCCTTGCCCGCAGTCCTAGGGATGCCTCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: HRGGQARGRFKAALG*PGSLARSPRDASSG
Trigger: TCCAGAGGAGGCATCCCTAGGACTGCGGGCAAGGGAGCCGGGCAAGCCCAGGGCAGCCTTGAACCGTCCCCTGGCCTGCCCTCCCCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000502678.1
ENST00000504671.1
ENST00000506269.1
ENST00000506889.1
ENST00000507384.1
ENST00000512695.1
ENST00000513431.5
ENST00000514283.1
ENST00000514438.1
CDS TCA 72 bp GGTGAGGCTGGCGGGGTCGCCATCGAGAGCGCTGACTaGGGGTGGCCTGCCAGGTGCTGGGCGCGTCCAGAA +
Preference number: 6 (lower is better)
Translates to: GEAGGVAIESAD*GWPARCWARPE
Trigger: TTCTGGACGCGCCCAGCACCTGGCAGGCCACCCTCAGTCAGCGCTCTCGATGGCGACCCCGCCAGCCTCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000502678.1
ENST00000504671.1
ENST00000506269.1
ENST00000506889.1
ENST00000512695.1
ENST00000513431.5
ENST00000514283.1
ENST00000514438.1
CDS GCA 72 bp TTGACGAGGCAGGGCCCTTGCAGGGTGCGCCCGCGCTaGCCTCTGACAGGTGCTGTTGGTACCTGCGGCCGG +
Preference number: 6 (lower is better)
Translates to: LTRQGPCRVRPR*PLTGAVGTCGR
Trigger: CCGGCCGCAGGTACCAACAGCACCTGTCAGAGGGCAGCGCGGGCGCACCCTGCAAGGGCCCTGCCTCGTCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510962.1
ENST00000512080.1
CDS CCA 72 bp AGCCCACGCTGCCGCTCCAGCTCCACCTCGGCGTCTTaGGCCAGGCGAATCACTTCCCGGGTGAGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: SPRCRSSSTSAS*ARRITSRVRLA
Trigger: CGCCAGCCTCACCCGGGAAGTGATTCGCCTGGCCCAAGACGCCGAGGTGGAGCTGGAGCGGCAGCGTGGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000502678.1
ENST00000504671.1
ENST00000506269.1
ENST00000506889.1
ENST00000512695.1
ENST00000513431.5
ENST00000514283.1
ENST00000514438.1
CDS CCA 72 bp CATCCACCGCAGCCACTTCCGCCCGTCCTCCGGAAGTaGGCCCCGGCAACGCAGCGTTCCACATCCCGCCCA +
Preference number: 6 (lower is better)
Translates to: HPPQPLPPVLRK*APATQRSTSRP
Trigger: TGGGCGGGATGTGGAACGCTGCGTTGCCGGGGCCCACTTCCGGAGGACGGGCGGAAGTGGCTGCGGTGGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506033.1
ENST00000510341.1
CDS CAA 72 bp CAGCCCACGCTGCCGCTCCAGCTCCACCTCGGCGTCTaGGGCCAGGCGAATCACTTCCCGGGTGAGGCTGGC +
Preference number: 6 (lower is better)
Translates to: QPTLPLQLHLGV*GQANHFPGEAG
Trigger: GCCAGCCTCACCCGGGAAGTGATTCGCCTGGCCCAAGACGCCGAGGTGGAGCTGGAGCGGCAGCGTGGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000502678.1
ENST00000504671.1
ENST00000506269.1
ENST00000506889.1
ENST00000512695.1
ENST00000513431.5
ENST00000514283.1
ENST00000514438.1
CDS TCA 72 bp CCAGGCAGCGCCGAACAGTGCTGCGGTCACAGGCGATaGCCAGGATGGGAATCACCGCCGGCGCGGGGGTCA +
Preference number: 6 (lower is better)
Translates to: PGSAEQCCGHRR*PGWESPPARGS
Trigger: TGACCCCCGCGCCGGCGGTGATTCCCATCCTGGTCATCGCCTGTGACCGCAGCACTGTTCGGCGCTGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000504671.1
ENST00000506889.1
ENST00000514283.1
CDS GCA 72 bp GTTCTTGAGATCTCAGGGCGTATGCAGGCCCGCCCCTaGCGCTGCTCCGGCCGCCGCATCCAGTCGTCCCAG +
Preference number: 6 (lower is better)
Translates to: VLEISGRMQARP*RCSGRRIQSSQ
Trigger: CTGGGACGACTGGATGCGGCGGCCGGAGCAGCGGCAGGGGCGGGCCTGCATACGCCCTGAGATCTCAAGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS GCA 72 bp GCGATCAGGTCTGAGGCCTGGATTCCACGAGGCCGGTaGAAGCCAGGAGCCAGCCCCACTCCCTCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: AIRSEAWIPRGR*KPGASPTPSPS
Trigger: GCTGGGCGAGGGAGTGGGGCTGGCTCCTGGCTTGCACCGGCCTCGTGGAATCCAGGCCTCAGACCTGATCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427865.2
CDS TCA 72 bp GCCCACCCAGCTGTCTCACCATGGGACCCCAGGCGGTaGGGGTGGGTAGCCGAGGACTACAGGCTGCTGGGT +
Preference number: 6 (lower is better)
Translates to: AHPAVSPWDPRR*GWVAEDYRLLG
Trigger: ACCCAGCAGCCTGTAGTCCTCGGCTACCCACCCTCACCGCCTGGGGTCCCATGGTGAGACAGCTGGGTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427865.2
CDS CCA 72 bp GCGATGGCCTGGGCCGTCTCCTCGTGCCCGCAGTCCTaGCTAACGATGATGGGGAAGAGCTCAGCCGAGGGC +
Preference number: 6 (lower is better)
Translates to: AMAWAVSSCPQS*LTMMGKSSAEG
Trigger: GCCCTCGGCTGAGCTCTTCCCCATCATCGTTAGCCAGGACTGCGGGCACGAGGAGACGGCCCAGGCCATCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000504671.1
ENST00000506889.1
CDS CAA 90 bp AGGCCAGGGGACGGTTCAAGGCTGCCCTGGGCTTGCCCGGCTCCCTaGCCCGCAGTCCTAGGGATGCCTCCTCTGGACTATGGGATTAGG +
Preference number: 6 (lower is better)
Translates to: RPGDGSRLPWACPAP*PAVLGMPPLDYGIR
Trigger: CCTAATCCCATAGTCCAGAGGAGGCATCCCTAGGACTGCGGGCAAGGGAGCCGGGCAAGCCCAGGGCAGCCTTGAACCGTCCCCTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000502678.1
ENST00000504671.1
ENST00000506269.1
ENST00000506889.1
ENST00000507384.1
ENST00000512695.1
ENST00000513431.5
ENST00000514283.1
ENST00000514438.1
CDS TCA 72 bp CCAGCGCACAGAGCCAGTTTCGCCAGCGATCAGGTCTaGGGCCTGGATTCCACGAGGCCGGTGCAAGCCAGG +
Preference number: 6 (lower is better)
Translates to: PAHRASFASDQV*GLDSTRPVQAR
Trigger: CCTGGCTTGCACCGGCCTCGTGGAATCCAGGCCTCAGACCTGATCGCTGGCGAAACTGGCTCTGTGCGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427865.2
CDS TCA 72 bp TTAGGAGGCAGCCATGCACCATGGGACCCCAGGCGGTaGGGGTGGGTAGCCGAGGACTACAGGCTGCTGGGT +
Preference number: 6 (lower is better)
Translates to: LGGSHAPWDPRR*GWVAEDYRLLG
Trigger: ACCCAGCAGCCTGTAGTCCTCGGCTACCCACCCTCACCGCCTGGGGTCCCATGGTGCATGGCTGCCTCCTAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514283.1
CDS GCA 72 bp GCAGCTCAGGCCTGCTGGCGTCCACCATCTGCTCCTTaGCGTTGTCATTCCAGGCCGAGACGCACCACAGGG +
Preference number: 6 (lower is better)
Translates to: AAQACWRPPSAP*RCHSRPRRTTG
Trigger: CCCTGTGGTGCGTCTCGGCCTGGAATGACAACGGCAAGGAGCAGATGGTGGACGCCAGCAGGCCTGAGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS GCA 72 bp CCAACAGCAGCCAGCCCAGGCCAGGGAAAAAGTCGGTaGGGTAGAGCAGCTCAGGCCTGCTGGCGTCCACCA +
Preference number: 6 (lower is better)
Translates to: PTAASPGQGKSR*GRAAQACWRPP
Trigger: TGGTGGACGCCAGCAGGCCTGAGCTGCTCTACCGCACCGACTTTTTCCCTGGCCTGGGCTGGCTGCTGTTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CCA 72 bp CTAATTCCAGCTAGGATCATAGCCCTCCCACGTCAGTaGGGGCGCCAGGTGGACACGGCGGCCCCGGAACTG +
Preference number: 6 (lower is better)
Translates to: LIPARIIALPRQ*GRQVDTAAPEL
Trigger: CAGTTCCGGGGCCGCCGTGTCCACCTGGCGCCCCCACTGACGTGGGAGGGCTATGATCCTAGCTGGAATTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CAA 90 bp AGAACTGCCCGTGGCTCACACCCTTGCGGCCAAAGGTCATCGTTCTaGAGATCTCAGGGCGTATGCAGGCCCGCCCCTGCCGCTGCTCCG +
Preference number: 6 (lower is better)
Translates to: RTARGSHPCGQRSSF*RSQGVCRPAPAAAP
Trigger: CGGAGCAGCGGCAGGGGCGGGCCTGCATACGCCCTGAGATCTCAAGAACGATGACCTTTGGCCGCAAGGGTGTGAGCCACGGGCAGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CAA 90 bp TCATCGCTGCTGTTTCTCGCTGCCTCTCTTGACGAGGCAGGGCCCTaGCAGGGTGCGCCCGCGCTGCCCTCTGACAGGTGCTGTTGGTAC +
Preference number: 6 (lower is better)
Translates to: SSLLFLAASLDEAGP*QGAPALPSDRCCWY
Trigger: GTACCAACAGCACCTGTCAGAGGGCAGCGCGGGCGCACCCTGCAAGGGCCCTGCCTCGTCAAGAGAGGCAGCGAGAAACAGCAGCGATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510962.1
ENST00000512080.1
CDS TCA 72 bp GTGGCTCACACCCTTGCGGCCAAAGGTCATCGTTCTTaGGATCTCAGGGCGTATGCAGGCCCGCCCCTGCCG +
Preference number: 6 (lower is better)
Translates to: VAHTLAAKGHRS*DLRAYAGPPLP
Trigger: CGGCAGGGGCGGGCCTGCATACGCCCTGAGATCTCAAGAACGATGACCTTTGGCCGCAAGGGTGTGAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS GCA 72 bp GGTAGTGGCGCGCGATCTTGTAGTAGCCCTGGAACTTaGGGTGGTCCGGCGGCACCGCAATGCTGCTCAGGT +
Preference number: 6 (lower is better)
Translates to: GSGARSCSSPGT*GGPAAPQCCSG
Trigger: ACCTGAGCAGCATTGCGGTGCCGCCGGACCACCGCAAGTTCCAGGGCTACTACAAGATCGCGCGCCACTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
ENST00000504671.1
CDS CCA 72 bp ACCACAGGGAGGGGTCGGCCTTCAGCAGCGGATAGGTaGCCCGAAAGTACTCGAAGAAGTCCGGGGCCACCT +
Preference number: 6 (lower is better)
Translates to: TTGRGRPSAADR*PESTRRSPGPP
Trigger: AGGTGGCCCCGGACTTCTTCGAGTACTTTCGGGCCACCTATCCGCTGCTGAAGGCCGACCCCTCCCTGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CCA 72 bp ACAGAGCCAGTTTCGCCAGCGATCAGGTCTGAGGCCTaGATTCCACGAGGCCGGTGCAAGCCAGGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: TEPVSPAIRSEA*IPRGRCKPGAS
Trigger: GCTGGCTCCTGGCTTGCACCGGCCTCGTGGAATCCAGGCCTCAGACCTGATCGCTGGCGAAACTGGCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427865.2
CDS CAA 72 bp AGCAGCTCAGGCCTGCTGGCGTCCACCATCTGCTCCTaGCCGTTGTCATTCCAGGCCGAGACGCACCACAGG +
Preference number: 6 (lower is better)
Translates to: SSSGLLASTICS*PLSFQAETHHR
Trigger: CCTGTGGTGCGTCTCGGCCTGGAATGACAACGGCAAGGAGCAGATGGTGGACGCCAGCAGGCCTGAGCTGCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CAA 72 bp CGTGGCTCACACCCTTGCGGCCAAAGGTCATCGTTCTaGAGATCTCAGGGCGTATGCAGGCCCGCCCCTGCC +
Preference number: 6 (lower is better)
Translates to: RGSHPCGQRSSF*RSQGVCRPAPA
Trigger: GGCAGGGGCGGGCCTGCATACGCCCTGAGATCTCAAGAACGATGACCTTTGGCCGCAAGGGTGTGAGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CAA 72 bp TGTTTCGTTCATCGCTGCTGTTTCTCGCTGCCTCTCTaGACGAGGCAGGGCCCTTGCAGGGTGCGCCCGCGC +
Preference number: 6 (lower is better)
Translates to: CFVHRCCFSLPL*TRQGPCRVRPR
Trigger: GCGCGGGCGCACCCTGCAAGGGCCCTGCCTCGTCAAGAGAGGCAGCGAGAAACAGCAGCGATGAACGAAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510962.1
ENST00000512080.1
CDS CAA 90 bp GGAAGGTTTTGTTTCGTTCATCGCTGCTGTTTCTCGCTGCCTCTCTaGACGAGGCAGGGCCCTTGCAGGGTGCGCCCGCGCTGCCCTCTG +
Preference number: 6 (lower is better)
Translates to: GRFCFVHRCCFSLPL*TRQGPCRVRPRCPL
Trigger: CAGAGGGCAGCGCGGGCGCACCCTGCAAGGGCCCTGCCTCGTCAAGAGAGGCAGCGAGAAACAGCAGCGATGAACGAAACAAAACCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510962.1
ENST00000512080.1
CDS CAA 90 bp CCCGACTTAAGGTCATCCATGACACCCAGAGCCTTGGCGAAAGCCTaGAAGCTGTCCCTGCCCGTATACTGCACCCGCACCTCCCCCAGC +
Preference number: 6 (lower is better)
Translates to: PDLRSSMTPRALAKA*KLSLPVYCTRTSPS
Trigger: GCTGGGGGAGGTGCGGGTGCAGTATACGGGCAGGGACAGCTTCAAGGCTTTCGCCAAGGCTCTGGGTGTCATGGATGACCTTAAGTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CAA 90 bp GCTCTCGGAACCCCCGACTTAAGGTCATCCATGACACCCAGAGCCTaGGCGAAAGCCTTGAAGCTGTCCCTGCCCGTATACTGCACCCGC +
Preference number: 6 (lower is better)
Translates to: ALGTPDLRSSMTPRA*AKALKLSLPVYCTR
Trigger: GCGGGTGCAGTATACGGGCAGGGACAGCTTCAAGGCTTTCGCCAAGGCTCTGGGTGTCATGGATGACCTTAAGTCGGGGGTTCCGAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS GCA 72 bp CAGGGAAAAAGTCGGTGCGGTAGAGCAGCTCAGGCCTaGTGGCGTCCACCATCTGCTCCTTGCCGTTGTCAT +
Preference number: 6 (lower is better)
Translates to: QGKSRCGRAAQA*WRPPSAPCRCH
Trigger: ATGACAACGGCAAGGAGCAGATGGTGGACGCCAGCAGGCCTGAGCTGCTCTACCGCACCGACTTTTTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CCA 72 bp GGAAAAAGTCGGTGCGGTAGAGCAGCTCAGGCCTGCTaGCGTCCACCATCTGCTCCTTGCCGTTGTCATTCC +
Preference number: 6 (lower is better)
Translates to: GKSRCGRAAQAC*RPPSAPCRCHS
Trigger: GGAATGACAACGGCAAGGAGCAGATGGTGGACGCCAGCAGGCCTGAGCTGCTCTACCGCACCGACTTTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CAA 72 bp AGGTCATCCATGACACCCAGAGCCTTGGCGAAAGCCTaGAAGCTGTCCCTGCCCGTATACTGCACCCGCACC +
Preference number: 6 (lower is better)
Translates to: RSSMTPRALAKA*KLSLPVYCTRT
Trigger: GGTGCGGGTGCAGTATACGGGCAGGGACAGCTTCAAGGCTTTCGCCAAGGCTCTGGGTGTCATGGATGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS GCA 72 bp GGTGCTGGTCAAAGAACTGCCCGTGGCTCACACCCTTaGGGCCAAAGGTCATCGTTCTTGAGATCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: GAGQRTARGSHP*GQRSSFLRSQG
Trigger: GCCCTGAGATCTCAAGAACGATGACCTTTGGCCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS TCA 72 bp GTGAGAACTGGCCCATCTGTCTTGTGCTGGGGCTCATaGGAAGAAACAGGCCTTAGAAGCGGCATGGCCCAG +
Preference number: 6 (lower is better)
Translates to: VRTGPSVLCWGS*EETGLRSGMAQ
Trigger: CTGGGCCATGCCGCTTCTAAGGCCTGTTTCTTCTCATGAGCCCCAGCACAAGACAGATGGGCCAGTTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
ENST00000504385.5
ENST00000506708.1
ENST00000506889.1
ENST00000508090.1
ENST00000508702.1
ENST00000510341.1
ENST00000510962.1
ENST00000512080.1
ENST00000513149.1
CDS GCA 72 bp AGCCGTGGTGGAGGAAGGTTTTGTTTCGTTCATCGCTaGTGTTTCTCGCTGCCTCTCTTGACGAGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: SRGGGRFCFVHR*CFSLPLLTRQG
Trigger: GCCCTGCCTCGTCAAGAGAGGCAGCGAGAAACAGCAGCGATGAACGAAACAAAACCTTCCTCCACCACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510962.1
ENST00000512080.1
CDS CCA 72 bp GGGGCTCATGAGAAGAAACAGGCCTTAGAAGCGGCATaGCCCAGGAGGCAGATTTCTCTGACTCACGTGTCC +
Preference number: 6 (lower is better)
Translates to: GAHEKKQALEAA*PRRQISLTHVS
Trigger: GGACACGTGAGTCAGAGAAATCTGCCTCCTGGGCCATGCCGCTTCTAAGGCCTGTTTCTTCTCATGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333055.8
ENST00000513149.1
CDS CAA 72 bp AGGTGCTGGTCAAAGAACTGCCCGTGGCTCACACCCTaGCGGCCAAAGGTCATCGTTCTTGAGATCTCAGGG +
Preference number: 6 (lower is better)
Translates to: RCWSKNCPWLTP*RPKVIVLEISG
Trigger: CCCTGAGATCTCAAGAACGATGACCTTTGGCCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CAA 72 bp ACCCCCGACTTAAGGTCATCCATGACACCCAGAGCCTaGGCGAAAGCCTTGAAGCTGTCCCTGCCCGTATAC +
Preference number: 6 (lower is better)
Translates to: TPDLRSSMTPRA*AKALKLSLPVY
Trigger: GTATACGGGCAGGGACAGCTTCAAGGCTTTCGCCAAGGCTCTGGGTGTCATGGATGACCTTAAGTCGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS TCA 72 bp CCCATCTCTTGCTCAGGCAGGGGAAGTTATCCACTGTaGGAACTGGCCCATCTGTCTTGTGCTGGGGCTCAT +
Preference number: 6 (lower is better)
Translates to: PISCSGRGSYPL*ELAHLSCAGAH
Trigger: ATGAGCCCCAGCACAAGACAGATGGGCCAGTTCTCACAGTGGATAACTTCCCCTGCCTGAGCAAGAGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000333055.8
ENST00000393340.7
ENST00000446023.6
ENST00000504385.5
ENST00000506708.1
ENST00000506889.1
ENST00000508090.1
ENST00000508702.1
ENST00000510341.1
ENST00000510962.1
ENST00000512080.1
ENST00000513149.1
CDS GCA 72 bp TTAGGAGGCAGCCATGCACGTGTCCAAAGTGAAATTTaGAGTGCTCCTCCCAGCTCCTCTCTCAGCAGTCCC +
Preference number: 6 (lower is better)
Translates to: LGGSHARVQSEI*SAPPSSSLSSP
Trigger: GGGACTGCTGAGAGAGGAGCTGGGAGGAGCACTGCAAATTTCACTTTGGACACGTGCATGGCTGCCTCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513431.5
CDS GCA 72 bp CCATGCACCTCTGACTCACGTGTCCAAAGTGAAATTTaGAGTGCTCCTCCCAGCTCCTCTCTCAGCAGTCCC +
Preference number: 6 (lower is better)
Translates to: PCTSDSRVQSEI*SAPPSSSLSSP
Trigger: GGGACTGCTGAGAGAGGAGCTGGGAGGAGCACTGCAAATTTCACTTTGGACACGTGAGTCAGAGGTGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514438.1
CDS CAA 90 bp TCCAGCTGGGTGAAGTGCACAAACTGCTGGTTCAGCTTGATAAACTaGAGGTGCTGGTCAAAGAACTGCCCGTGGCTCACACCCTTGCGG +
Preference number: 6 (lower is better)
Translates to: SSWVKCTNCWFSLIN*RCWSKNCPWLTPLR
Trigger: CCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCACCTCAAGTTTATCAAGCTGAACCAGCAGTTTGTGCACTTCACCCAGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CAA 90 bp ACTCCCGAGAACACTCTCCTGGAATGTTTAAGGCCCAAGTCCTGCTaGCAGCAGCCCCACAGTGTTCCCATTTCTCAGCCCGAAAACCCA +
Preference number: 6 (lower is better)
Translates to: TPENTLLECLRPKSC*QQPHSVPISQPENP
Trigger: TGGGTTTTCGGGCTGAGAAATGGGAACACTGTGGGGCTGCTGCAAGCAGGACTTGGGCCTTAAACATTCCAGGAGAGTGTTCTCGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446023.6
ENST00000504385.5
ENST00000506708.1
CDS CAA 90 bp ATAAACTTGAGGTGCTGGTCAAAGAACTGCCCGTGGCTCACACCCTaGCGGCCAAAGGTCATCGTTCTTGAGATCTCAGGGCGTATGCAG +
Preference number: 6 (lower is better)
Translates to: INLRCWSKNCPWLTP*RPKVIVLEISGRMQ
Trigger: CTGCATACGCCCTGAGATCTCAAGAACGATGACCTTTGGCCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCACCTCAAGTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS GCA 72 bp TTCAGCTTGATAAACTTGAGGTGCTGGTCAAAGAACTaGCCGTGGCTCACACCCTTGCGGCCAAAGGTCATC +
Preference number: 6 (lower is better)
Translates to: FSLINLRCWSKN*PWLTPLRPKVI
Trigger: GATGACCTTTGGCCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCACCTCAAGTTTATCAAGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS GCA 72 bp GCAGATTTCTCTGACTCACGTGTCCAAAGTGAAATTTaGAGTGCTCCTCCCAGCTCCTCTCTCAGCAGTCCC +
Preference number: 6 (lower is better)
Translates to: ADFSDSRVQSEI*SAPPSSSLSSP
Trigger: GGGACTGCTGAGAGAGGAGCTGGGAGGAGCACTGCAAATTTCACTTTGGACACGTGAGTCAGAGAAATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333055.8
ENST00000513149.1
CDS CCA 72 bp ACAAACTGCTGGTTCAGCTTGATAAACTTGAGGTGCTaGTCAAAGAACTGCCCGTGGCTCACACCCTTGCGG +
Preference number: 6 (lower is better)
Translates to: TNCWFSLINLRC*SKNCPWLTPLR
Trigger: CCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCACCTCAAGTTTATCAAGCTGAACCAGCAGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS TCA 72 bp GGTTATTTCGTGGCTCTTTTCCTCCACCCTCTCCTTTaGCCTGGCCAATACCCTCCTGAAACTCCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: GYFVALFLHPLL*PGQYPPETPSS
Trigger: AGAGGAAGGAGTTTCAGGAGGGTATTGGCCAGGTCAAAGGAGAGGGTGGAGGAAAAGAGCCACGAAATAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508090.1
CDS GCA 72 bp ATGCCTCCTCTGGACTATGGGATTAGGAGGCAGCCATaGACCTCTGACTCACGTGTCCAAAGTGAAATTTGC +
Preference number: 6 (lower is better)
Translates to: MPPLDYGIRRQP*TSDSRVQSEIC
Trigger: GCAAATTTCACTTTGGACACGTGAGTCAGAGGTGCATGGCTGCCTCCTAATCCCATAGTCCAGAGGAGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514438.1
CDS CCA 72 bp TTGATAAACTTGAGGTGCTGGTCAAAGAACTGCCCGTaGCTCACACCCTTGCGGCCAAAGGTCATCGTTCTT +
Preference number: 6 (lower is better)
Translates to: LINLRCWSKNCP*LTPLRPKVIVL
Trigger: AAGAACGATGACCTTTGGCCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGACCAGCACCTCAAGTTTATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CAA 72 bp TCCAGCTGGGTGAAGTGCACAAACTGCTGGTTCAGCTaGATAAACTTGAGGTGCTGGTCAAAGAACTGCCCG +
Preference number: 6 (lower is better)
Translates to: SSWVKCTNCWFS*INLRCWSKNCP
Trigger: CGGGCAGTTCTTTGACCAGCACCTCAAGTTTATCAAGCTGAACCAGCAGTTTGTGCACTTCACCCAGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CAA 90 bp TTCCACAACATTCCCACATCCAGTCAGTCAAAAGCCTCCGAAAGCTaGTCTCCCGGTTATTTCGTGGCTCTTTTCCTCCACCCTCTCCTT +
Preference number: 6 (lower is better)
Translates to: FHNIPTSSQSKASES*SPGYFVALFLHPLL
Trigger: AAGGAGAGGGTGGAGGAAAAGAGCCACGAAATAACCGGGAGACAAGCTTTCGGAGGCTTTTGACTGACTGGATGTGGGAATGTTGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508090.1
CDS CAA 72 bp GTGAAGTGCACAAACTGCTGGTTCAGCTTGATAAACTaGAGGTGCTGGTCAAAGAACTGCCCGTGGCTCACA +
Preference number: 6 (lower is better)
Translates to: VKCTNCWFSLIN*RCWSKNCPWLT
Trigger: TGTGAGCCACGGGCAGTTCTTTGACCAGCACCTCAAGTTTATCAAGCTGAACCAGCAGTTTGTGCACTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307826.5
ENST00000333055.8
ENST00000393340.7
ENST00000427865.2
ENST00000446023.6
CDS CAA 72 bp ATTCCCACATCCAGTCAGTCAAAAGCCTCCGAAAGCTaGTCTCCCGGTTATTTCGTGGCTCTTTTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: IPTSSQSKASES*SPGYFVALFLH
Trigger: GTGGAGGAAAAGAGCCACGAAATAACCGGGAGACAAGCTTTCGGAGGCTTTTGACTGACTGGATGTGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508090.1
CDS TCA 72 bp CTTCTGCACAGGCACAGCAAGACATTAAGTGGGAAATaGGACAGGAGCCTTACCTTTCTTCTCTTGTCTCAG +
Preference number: 6 (lower is better)
Translates to: LLHRHSKTLSGK*DRSLTFLLLSQ
Trigger: CTGAGACAAGAGAAGAAAGGTAAGGCTCCTGTCTCATTTCCCACTTAATGTCTTGCTGTGCCTGTGCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502678.1
CDS GCA 72 bp CTTGCATTCTTTGCTCCTTTAACTAAGCTCCCCCTCTaGTTGCAAAACTGTGCCAGAGATGTAATTCCCAAC +
Preference number: 6 (lower is better)
Translates to: LAFFAPLTKLPL*LQNCARDVIPN
Trigger: GTTGGGAATTACATCTCTGGCACAGTTTTGCAAGCAGAGGGGGAGCTTAGTTAAAGGAGCAAAGAATGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506708.1
CDS CCA 72 bp TCAACACCTTCTGCACAGGCACAGCAAGACATTAAGTaGGAAATGAGACAGGAGCCTTACCTTTCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: STPSAQAQQDIK*EMRQEPYLSSL
Trigger: AAGAGAAGAAAGGTAAGGCTCCTGTCTCATTTCCCACTTAATGTCTTGCTGTGCCTGTGCAGAAGGTGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502678.1