RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MFSD2A (Homo sapiens)

Ensembl gene IDs: ENSG00000168389

Ensembl transcript IDs: ENST00000372809.5, ENST00000372811.10, ENST00000420632.6, ENST00000434861.5, ENST00000459917.1, ENST00000469745.5, ENST00000480630.5, ENST00000481612.1, ENST00000483824.5, ENST00000491515.5

Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGTGGCCTTCTGCATGGTaGCTTCGGGCAACGTGGCGG +
Preference number: 2 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLWPSAW*LRATWR
Trigger: CCGCCACGTTGCCCGAAGCCACCATGCAGAAGGCCA...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
3UTR-3UTR GCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGCACCTGCAGTCCAGCTaGTCAGCAAGCCGGCAGACA +
Preference number: 2 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQHLQSS*SASRQT
Trigger: TGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTG...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
3UTR-3UTR CCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGATGGCCTTCTGCATGGTaGCTTCGGGCAACGTGGCGG +
Preference number: 2 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRWPSAW*LRATWR
Trigger: CCGCCACGTTGCCCGAAGCCACCATGCAGAAGGCCA...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
3UTR-3UTR CCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGTGGCCTTCTGCATaGTGGCTTCGGGCAACGTGG +
Preference number: 2 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVLWPSA*WLRATW
Trigger: CCACGTTGCCCGAAGCCACCATGCAGAAGGCCACAG...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
3UTR-3UTR GCA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCACCTGCAGTCCAGCTaGTCAGCAAGCCGGCAGACA +
Preference number: 2 (lower is better)
Translates to: STLVFRARPDQSLAYSQWHLQSS*SASRQT
Trigger: TGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTG...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
3UTR-3UTR CCA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCTGTGGCCTTCTGCATaGTGGCTTCGGGCAACGTGG +
Preference number: 2 (lower is better)
Translates to: STLVFRARPDQSLAYSQWLWPSA*WLRATW
Trigger: CCACGTTGCCCGAAGCCACCATGCAGAAGGCCACAG...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
3UTR-3UTR GCA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGTCCCTTCCTAGCACCTaGAGTCCAGCTGCTCAGCAA +
Preference number: 2 (lower is better)
Translates to: STLVFRARPDQSLAYSQWSLPST*SPAAQQ
Trigger: TTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
3UTR-3UTR CCA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGGCACAGCAAGTGTCCTaGGCCACCTCCTTGAGTCTT +
Preference number: 2 (lower is better)
Translates to: STLVFRARPDQSLAYSQWAQQVS*ATSLSL
Trigger: AAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGC...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
3UTR-3UTR CAA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGTCCTGGGCCACCTCCTaGAGTCTTCAGTTCCCTTCC +
Preference number: 3 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQSWATS*SLQFPS
Trigger: GGAAGGGAACTGAAGACTCAAGGAGGTGGCCCAGGA...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
3UTR-3UTR CAA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGTCCTGGGCCACCTCCTaGAGTCTTCAGTTCCCTTCC +
Preference number: 3 (lower is better)
Translates to: STLVFRARPDQSLAYSQWSWATS*SLQFPS
Trigger: GGAAGGGAACTGAAGACTCAAGGAGGTGGCCCAGGA...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTGACGGGATGCTCCTCTaGCCCGCAGGCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPDGMLL*PAGRCS
Trigger: GGAGCAGCGGCCTGCGGGGCAGAGGAGCATCCCGTC...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGCTTCTCCTTTGGCCATaGCCCGCGGGCCACGCCGCT +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLLLLWP*PAGHAA
Trigger: AGCGGCGTGGCCCGCGGGTCATGGCCAAAGGAGAAG...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGTGCCCCGCAGGCCGCTaGTCCTCCCAAGCTCGCTTC +
Preference number: 4 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLCPAGR*SSQARF
Trigger: GAAGCGAGCTTGGGAGGAGCAGCGGCCTGCGGGGCA...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGGCGGGCCACGCCGCTTaGGACCTGGTAGACGGGATG +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLAGHAA*DLVDGM
Trigger: CATCCCGTCTACCAGGTCCCAAGCGGCGTGGCCCGC...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTCTTCTCCTTTGGCCATaGCCCGCGGGCCACGCCGCT +
Preference number: 4 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSLLLWP*PAGHAA
Trigger: AGCGGCGTGGCCCGCGGGTCATGGCCAAAGGAGAAG...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGCTTCTCCTTTGGCCATaGCCCGCGGGCCACGCCGCT +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRLLLWP*PAGHAA
Trigger: AGCGGCGTGGCCCGCGGGTCATGGCCAAAGGAGAAG...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGCCACCAGGGGGTCTGTaGTGGCATCCCAGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQPPGGL*WHPRLG
Trigger: GCCGAGCCTGGGATGCCATCACAGACCCCCTGGTGG...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372809.5
ENST00000372811.10
CDS-3UTR TCA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTATGGGCCGTGGCTCATaGCCAGCCGTAGGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSMGRGS*PAVGPG
Trigger: TCCGGGGCCTACGGCTGGTCATGAGCCACGGCCCAT...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGATGGGCCGTGGCTCATaGCCAGCCGTAGGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRMGRGS*PAVGPG
Trigger: TCCGGGGCCTACGGCTGGTCATGAGCCACGGCCCAT...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGATGGGCCGTGGCTCATaGCCAGCCGTAGGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQMGRGS*PAVGPG
Trigger: TCCGGGGCCTACGGCTGGTCATGAGCCACGGCCCAT...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTTGCCCCGCAGGCCGCTaGTCCTCCCAAGCTCGCTTC +
Preference number: 4 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSCPAGR*SSQARF
Trigger: GAAGCGAGCTTGGGAGGAGCAGCGGCCTGCGGGGCA...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCGACGGGATGCTCCTCTaGCCCGCAGGCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPDGMLL*PAGRCS
Trigger: GGAGCAGCGGCCTGCGGGGCAGAGGAGCATCCCGTC...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGTTTGGAGGATGCTGGTaGGTAGCAGCCCCGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLFGGCW*VAAPPR
Trigger: CCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAA...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGCAGCCGGCCCCACAGTaGGCACAGCAAGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQQPAPQ*AQQVSW
Trigger: CCAGGACACTTGCTGTGCTCACTGTGGGGCCGGCTG...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGATGCCCCGCAGGCCGCTaGTCCTCCCAAGCTCGCTTC +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRCPAGR*SSQARF
Trigger: GAAGCGAGCTTGGGAGGAGCAGCGGCCTGCGGGGCA...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGGGGCCGGGCGTTCAGTaGTTTGGAGGATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLGPGVQ*FGGCWW
Trigger: CCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCC...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGTTGACACGTTCCGGCTaGGAGCAGCCACGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLLTRSG*EQPRVW
Trigger: CCAGACCCGTGGCTGCTCGCAGCCGGAACGTGTCAA...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGTGGCCCTGAGCAGCCAGAGCTaGTGGCCTCGTCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: CSPAAQQAGRQVLIPSVALSSQS*WPRPSV
Trigger: CACTGAGGGACGAGGCCAGCAGCTCTGGCTGCTCAG...GGCCACAGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTCTGAGCAGCCAGAGCTaGTGGCCTCGTCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPLSSQS*WPRPSV
Trigger: CACTGAGGGACGAGGCCAGCAGCTCTGGCTGCTCAG...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCAGGAACGCACTCTGCTaGACGCCCCCTCCGCGCCTC +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPRNALC*TPPPRL
Trigger: GAGGCGCGGAGGGGGCGTGCAGCAGAGTGCGTTCCT...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420632.6
CDS-3UTR CCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCGCGGGCCACGCCGCTTaGGACCTGGTAGACGGGATG +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPAGHAA*DLVDGM
Trigger: CATCCCGTCTACCAGGTCCCAAGCGGCGTGGCCCGC...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCTTTGGAGGATGCTGGTaGGTAGCAGCCCCGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVFGGCW*VAAPPR
Trigger: CCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAA...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTTTGGAGGATGCTGGTaGGTAGCAGCCCCGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRFGGCW*VAAPPR
Trigger: CCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAA...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGTGCTTTGGAGGATGCTaGTGGGTAGCAGCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLCFGGC*WVAAPP
Trigger: CGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCA...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGTGGCCTGCTTTGGAGGATGCTaGTGGGTAGCAGCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: CSPAAQQAGRQVLIPSVACFGGC*WVAAPP
Trigger: CGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCA...GGCCACAGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGAGGCAGCTGCCACACTaGTGCCAGCTGCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLRQLPH*CQLPQL
Trigger: TAGCTGTGGCAGCTGGCATCAGTGTGGCAGCTGCCT...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGGCAGGCCCAGCAGGATaGGAACTATGGGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLAGPAG*ELWEPW
Trigger: CCATGGCTCCCATAGTTCTCATCCTGCTGGGCCTGC...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCCAGCCGGCCCCACAGTaGGCACAGCAAGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPQPAPQ*AQQVSW
Trigger: CCAGGACACTTGCTGTGCTCACTGTGGGGCCGGCTG...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGCAGTGCTTTGGAGGATaGTGGTGGGTAGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLQCFGG*WWVAAP
Trigger: CGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTG...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTCCGTGCCCAGCACTGTaGCCAGCACTTCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPPCPAL*PALPQS
Trigger: TGACTGTGGAAGTGCTGGGCACAGTGCTGGGCACGG...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGTTGACACGTTCCGGCTaGGAGCAGCCACGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQLTRSG*EQPRVW
Trigger: CCAGACCCGTGGCTGCTCGCAGCCGGAACGTGTCAA...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTTGACACGTTCCGGCTaGGAGCAGCCACGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRLTRSG*EQPRVW
Trigger: CCAGACCCGTGGCTGCTCGCAGCCGGAACGTGTCAA...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGTGCTTTGGAGGATGCTaGTGGGTAGCAGCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQCFGGC*WVAAPP
Trigger: CGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCA...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGCCCACGATTTGTCCCTaGATCGCCGTGCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLPTICP*IAVPST
Trigger: AGTGCTGGGCACGGCGATCCAGGGACAAATCGTGGG...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGAGCAGCCAGAGCTGCTaGCCTCGTCCCTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQSSQSC*PRPSVP
Trigger: AGGCACTGAGGGACGAGGCCAGCAGCTCTGGCTGCT...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGTGGCTTCGGGCAACGTaGCGGGCCCTAGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQWLRAT*RALEDA
Trigger: AGCATCCTCTAGGGCCCGCCACGTTGCCCGAAGCCA...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTTGGCTTCGGGCAACGTaGCGGGCCCTAGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSWLRAT*RALEDA
Trigger: AGCATCCTCTAGGGCCCGCCACGTTGCCCGAAGCCA...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGTGGCCTTCTGCATGGTaGCTTCGGGCAACGTGGCGG +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQWPSAW*LRATWR
Trigger: CCGCCACGTTGCCCGAAGCCACCATGCAGAAGGCCA...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGTGGCCCTGTGGCCTTCTGCATaGTGGCTTCGGGCAACGTGG +
Preference number: 4 (lower is better)
Translates to: CSPAAQQAGRQVLIPSVALWPSA*WLRATW
Trigger: CCACGTTGCCCGAAGCCACCATGCAGAAGGCCACAG...GGCCACAGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGCTAGCCAAGCCGGCTaGCAGACGAGGAACGCACTC +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQASQAG*QTRNAL
Trigger: GAGTGCGTTCCTCGTCTGCCAGCCGGCTTGGCTAGC...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGAGGCAGCTGCCACACTaGTGCCAGCTGCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQRQLPH*CQLPQL
Trigger: TAGCTGTGGCAGCTGGCATCAGTGTGGCAGCTGCCT...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCAGGCAGCTGCCACACTaGTGCCAGCTGCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVRQLPH*CQLPQL
Trigger: TAGCTGTGGCAGCTGGCATCAGTGTGGCAGCTGCCT...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCGCAGGCCCAGCAGGATaGGAACTATGGGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVAGPAG*ELWEPW
Trigger: CCATGGCTCCCATAGTTCTCATCCTGCTGGGCCTGC...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGCAGGCCCAGCAGGATaGGAACTATGGGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQAGPAG*ELWEPW
Trigger: CCATGGCTCCCATAGTTCTCATCCTGCTGGGCCTGC...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGTGTGGAGTCTGTTTCTaGGCAGCCAGAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLCGVCF*AARAAG
Trigger: GCCAGCAGCTCTGGCTGCTCAGAAACAGACTCCACA...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGCAGTGCTTTGGAGGATaGTGGTGGGTAGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQQCFGG*WWVAAP
Trigger: CGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTG...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCGGGCCGGGCGTTCAGTaGTTTGGAGGATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPGPGVQ*FGGCWW
Trigger: CCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCC...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGAGGGCCGGGCGTTCAGTaGTTTGGAGGATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRGPGVQ*FGGCWW
Trigger: CCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCC...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTCCGTGCCCAGCACTGTaGCCAGCACTTCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSPCPAL*PALPQS
Trigger: TGACTGTGGAAGTGCTGGGCACAGTGCTGGGCACGG...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGCCGTGCCCAGCACTGTaGCCAGCACTTCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRPCPAL*PALPQS
Trigger: TGACTGTGGAAGTGCTGGGCACAGTGCTGGGCACGG...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTCACCTGCAGTCCAGCTaGTCAGCAAGCCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSHLQSS*SASRQT
Trigger: TGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTG...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGCACCTGCAGTCCAGCTaGTCAGCAAGCCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRHLQSS*SASRQT
Trigger: TGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTG...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCACCTGCAGTCCAGCTaGTCAGCAAGCCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVHLQSS*SASRQT
Trigger: TGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTG...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATAGGTCTGGCCGTGTaGGAAGTCGGGCACGAACCA +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLIGLAV*EVGHEP
Trigger: TGGTTCGTGCCCGACTTCCCACACGGCCAGACCTAT...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGCCCACGATTTGTCCCTaGATCGCCGTGCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRPTICP*IAVPST
Trigger: AGTGCTGGGCACGGCGATCCAGGGACAAATCGTGGG...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCCCACGATTTGTCCCTaGATCGCCGTGCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVPTICP*IAVPST
Trigger: AGTGCTGGGCACGGCGATCCAGGGACAAATCGTGGG...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGCCGGAAGTAGGCGATTaGCTCAGACTGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLPEVGD*LRLLGF
Trigger: GAAGCCCAGCAGTCTGAGCCAATCGCCTACTTCCGG...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGCCGGAAGTAGGCGATTaGCTCAGACTGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLPEVGD*LRLLGF
Trigger: GAAGCCCAGCAGTCTGAGCCAATCGCCTACTTCCGG...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCTGGCCTTCTGCATGGTaGCTTCGGGCAACGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPWPSAW*LRATWR
Trigger: CCGCCACGTTGCCCGAAGCCACCATGCAGAAGGCCA...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGTTGGCATATTCACAGTaGCAGCCCCAGGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLLAYSQ*QPQGLA
Trigger: GGCCAAGCCCTGGGGCTGCCACTGTGAATATGCCAA...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGTGGCCTTGGCATATTCACAGTaGCAGCCCCAGGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: CSPAAQQAGRQVLIPSVALAYSQ*QPQGLA
Trigger: GGCCAAGCCCTGGGGCTGCCACTGTGAATATGCCAA...GGCCACAGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCGCTAGCCAAGCCGGCTaGCAGACGAGGAACGCACTC +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPASQAG*QTRNAL
Trigger: GAGTGCGTTCCTCGTCTGCCAGCCGGCTTGGCTAGC...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTGTGGAGTCTGTTTCTaGGCAGCCAGAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRCGVCF*AARAAG
Trigger: GCCAGCAGCTCTGGCTGCTCAGAAACAGACTCCACA...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGTGGCCCCCTGTGTGAGGTGGTaGCATGTGTATGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: CSPAAQQAGRQVLIPSVAPCVRW*HVYGWH
Trigger: GTGCCAACCATACACATGGCACCACCTCACACAGGG...GGCCACAGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGTGGCCCGCTGCCAGCAGGTATaGCTTTTGCGTTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: CSPAAQQAGRQVLIPSVARCQQV*LLRFPV
Trigger: CACAGGGAAACGCAAAAGGCATACCTGCTGGCAGCG...GGCCACAGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTGACAATGACCCCCGCTaGCAGCAGGTATGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPDNDPR*QQVCLL
Trigger: CAAAAGGCATACCTGCTGGCAGCGGGGGTCATTGTC...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTACGGGTCTGGTACCCTaGAAAGTCCAGACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPTGLVP*KVQTEG
Trigger: ACCCTCAGTCTGGACTTTGCAGGGTACCAGACCCGT...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGACGGGTCTGGTACCCTaGAAAGTCCAGACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLTGLVP*KVQTEG
Trigger: ACCCTCAGTCTGGACTTTGCAGGGTACCAGACCCGT...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGTCGTCCCTCAGTGCCTaGAGGGCCTTCTTATTCTGC +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLSSLSA*RAFLFC
Trigger: GCAGAATAAGAAGGCCCTGCAGGCACTGAGGGACGA...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGTGGCCTCCCTTCCTAGCACCTaGAGTCCAGCTGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: CSPAAQQAGRQVLIPSVASLPST*SPAAQQ
Trigger: TTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA...GGCCACAGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCATAGGTCTGGCCGTGTaGGAAGTCGGGCACGAACCA +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVIGLAV*EVGHEP
Trigger: TGGTTCGTGCCCGACTTCCCACACGGCCAGACCTAT...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGTTGATGTATGGGCCGTaGCTCATGACCAGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLLMYGP*LMTSRR
Trigger: CCTACGGCTGGTCATGAGCCACGGCCCATACATCAA...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACTGTGGCCTTCTGCATaGTGGCTTCGGGCAACGTGG +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRLWPSA*WLRATW
Trigger: CCACGTTGCCCGAAGCCACCATGCAGAAGGCCACAG...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTTGGCATATTCACAGTaGCAGCCCCAGGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRLAYSQ*QPQGLA
Trigger: GGCCAAGCCCTGGGGCTGCCACTGTGAATATGCCAA...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGAGGGCCCACCTGGAATaGGGAGAAGCAAAAGACAAC +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLRAHLE*GEAKDN
Trigger: GTTGTCTTTTGCTTCTCCTCATTCCAGGTGGGCCCT...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372809.5
CDS-3UTR TCA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGTATAGATACAGACAATaGCCCCCGCTGCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLYRYRQ*PPLPAG
Trigger: ACCTGCTGGCAGCGGGGGTCATTGTCTGTATCTATA...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTATAGATACAGACAATaGCCCCCGCTGCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPYRYRQ*PPLPAG
Trigger: ACCTGCTGGCAGCGGGGGTCATTGTCTGTATCTATA...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTGATGGAAGTCGTCAATaGCATCAGGCAGCATGGACC +
Preference number: 4 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPDGSRQ*HQAAWT
Trigger: GGTCCATGCTGCCTGATGTCATTGACGACTTCCATC...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGGATGGAAGTCGTCAATaGCATCAGGCAGCATGGACC +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLDGSRQ*HQAAWT
Trigger: GGTCCATGCTGCCTGATGTCATTGACGACTTCCATC...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGGGGGCTCCCCCAAGTaGATAGCAAAGCTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSGGSPK*IAKLVA
Trigger: TGCAACAAGCTTTGCTATGCACTTGGGGGAGCCCCC...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372809.5
ENST00000372811.10
CDS-3UTR GCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCGGGGGCTCCCCCAAGTaGATAGCAAAGCTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVGGSPK*IAKLVA
Trigger: TGCAACAAGCTTTGCTATGCACTTGGGGGAGCCCCC...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372809.5
ENST00000372811.10
CDS-3UTR GCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGCGCTGCCAGCAGGTATaGCTTTTGCGTTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRRCQQV*LLRFPV
Trigger: CACAGGGAAACGCAAAAGGCATACCTGCTGGCAGCG...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGACAATGACCCCCGCTaGCAGCAGGTATGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQDNDPR*QQVCLL
Trigger: CAAAAGGCATACCTGCTGGCAGCGGGGGTCATTGTC...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCGACAATGACCCCCGCTaGCAGCAGGTATGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVDNDPR*QQVCLL
Trigger: CAAAAGGCATACCTGCTGGCAGCGGGGGTCATTGTC...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGCCATGGAAGTGGGGCTaGTTCAGATGGAAGTCGTCA +
Preference number: 4 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLPWKWG*FRWKSS
Trigger: TGACGACTTCCATCTGAAGCAGCCCCACTTCCATGG...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCAGGGCCTTCTTATTCTaGCGCCGCCTCTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVRAFLF*RRLSSS
Trigger: TGATGAGGAGAGGCGGCGGCAGAATAAGAAGGCCCT...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTAGGGCCTTCTTATTCTaGCGCCGCCTCTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSRAFLF*RRLSSS
Trigger: TGATGAGGAGAGGCGGCGGCAGAATAAGAAGGCCCT...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCGTCCCTCAGTGCCTaGAGGGCCTTCTTATTCTGC +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRSSLSA*RAFLFC
Trigger: GCAGAATAAGAAGGCCCTGCAGGCACTGAGGGACGA...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCTCCCTTCCTAGCACCTaGAGTCCAGCTGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVSLPST*SPAAQQ
Trigger: TTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGACGAGGAACGCACTCTaGTGCACGCCCCCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: STLVFRARPDQSLAYSQWTRNAL*CTPPPR
Trigger: GCGCGGAGGGGGCGTGCAGCAGAGTGCGTTCCTCGT...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420632.6
CDS-3UTR CCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGAGGGCGTTCAGTGCTTTaGAGGATGCTGGTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRGRSVL*RMLVGS
Trigger: GCTACCCACCAGCATCCTCCAAAGCACTGAACGCCC...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCGGGCGTTCAGTGCTTTaGAGGATGCTGGTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPGRSVL*RMLVGS
Trigger: GCTACCCACCAGCATCCTCCAAAGCACTGAACGCCC...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCGGTTCTTTCTTCACCTaGGCCGGGCGTTCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVGSFFT*AGRSVL
Trigger: AAGCACTGAACGCCCGGCCCAGGTGAAGAAAGAACC...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372809.5
ENST00000372811.10
CDS-3UTR CCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACCGGAAGTAGGCGATTaGCTCAGACTGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRPEVGD*LRLLGF
Trigger: GAAGCCCAGCAGTCTGAGCCAATCGCCTACTTCCGG...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCGGTTCCATGGAAGTaGGGCTGCTTCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPSVPWK*GCFRWK
Trigger: CTTCCATCTGAAGCAGCCCCACTTCCATGGAACCGA...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCATGGGCTCGGTTCCATaGAAGTGGGGCTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVMGSVP*KWGCFR
Trigger: TCTGAAGCAGCCCCACTTCCATGGAACCGAGCCCAT...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGAGAGCAGCCACGGGTCTaGTACCCTGCAAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGREQPRV*YPAKSR
Trigger: TCTGGACTTTGCAGGGTACCAGACCCGTGGCTGCTC...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCGAGCAGCCACGGGTCTaGTACCCTGCAAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPEQPRV*YPAKSR
Trigger: TCTGGACTTTGCAGGGTACCAGACCCGTGGCTGCTC...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGCACAGCAAGTGTCCTaGGCCACCTCCTTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSAQQVS*ATSLSL
Trigger: AAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGC...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGCACAGCAAGTGTCCTaGGCCACCTCCTTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQAQQVS*ATSLSL
Trigger: AAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGC...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCCCGATCAGTCCTTaGCATATTCACAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQGPISP*HIHSGS
Trigger: GCTGCCACTGTGAATATGCCAAGGACTGATCGGGCC...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGGCCCGATCAGTCCTTaGCATATTCACAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSGPISP*HIHSGS
Trigger: GCTGCCACTGTGAATATGCCAAGGACTGATCGGGCC...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGTATAGATACAGACAATaGCCCCCGCTGCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQYRYRQ*PPLPAG
Trigger: ACCTGCTGGCAGCGGGGGTCATTGTCTGTATCTATA...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGGGTAGAAATGCCCAGTaGCACTCCAGAGGCAAACTT +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLGRNAQ*HSRGKL
Trigger: AAGTTTGCCTCTGGAGTGTCACTGGGCATTTCTACC...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCAATGGGGTACATTTTaGAGAGCAGCAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVQWGTF*RAAGPA
Trigger: TGCTGGGCCTGCTGCTCTTCAAAATGTACCCCATTG...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCGAATCCCGCTCAGTCTaGTCGGTGCTGATGAACATG +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVESRSV*SVLMNM
Trigger: CATGTTCATCAGCACCGAGCAGACTGAGCGGGATTC...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGAATCCCGCTCAGTCTaGTCGGTGCTGATGAACATG +
Preference number: 4 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSESRSV*SVLMNM
Trigger: CATGTTCATCAGCACCGAGCAGACTGAGCGGGATTC...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGGAAACAAGGCGTGTCTaGTTGGCCCACGATTTGTCC +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRETRRV*LAHDLS
Trigger: GGACAAATCGTGGGCCAAGCAGACACGCCTTGTTTC...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCGAAACAAGGCGTGTCTaGTTGGCCCACGATTTGTCC +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVETRRV*LAHDLS
Trigger: GGACAAATCGTGGGCCAAGCAGACACGCCTTGTTTC...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCCCCTGTGTGAGGTGGTaGCATGTGTATGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPPCVRW*HVYGWH
Trigger: GTGCCAACCATACACATGGCACCACCTCACACAGGG...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACCCTGTGTGAGGTGGTaGCATGTGTATGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRPCVRW*HVYGWH
Trigger: GTGCCAACCATACACATGGCACCACCTCACACAGGG...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGAGCAGGTATGCCTTTTaGGTTTCCCTGTGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLSRYAF*VSLCEV
Trigger: CACCTCACACAGGGAAACGCAAAAGGCATACCTGCT...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGAGCAGGTATGCCTTTTaGGTTTCCCTGTGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLSRYAF*VSLCEV
Trigger: CACCTCACACAGGGAAACGCAAAAGGCATACCTGCT...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGCACACTGATGCCAGCTaGCACAGCTACCGCATATGT +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQHTDAS*HSYRIC
Trigger: ACATATGCGGTAGCTGTGGCAGCTGGCATCAGTGTG...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGCCATGGAAGTGGGGCTaGTTCAGATGGAAGTCGTCA +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQPWKWG*FRWKSS
Trigger: TGACGACTTCCATCTGAAGCAGCCCCACTTCCATGG...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGCCATGGAAGTGGGGCTaGTTCAGATGGAAGTCGTCA +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRPWKWG*FRWKSS
Trigger: TGACGACTTCCATCTGAAGCAGCCCCACTTCCATGG...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGAAGGGCCTTCTTATTCTaGCGCCGCCTCTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRRAFLF*RRLSSS
Trigger: TGATGAGGAGAGGCGGCGGCAGAATAAGAAGGCCCT...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCTCGTCCCTCAGTGCCTaGAGGGCCTTCTTATTCTGC +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPSSLSA*RAFLFC
Trigger: GCAGAATAAGAAGGCCCTGCAGGCACTGAGGGACGA...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCGGTTCTTTCTTCACCTaGGCCGGGCGTTCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPGSFFT*AGRSVL
Trigger: AAGCACTGAACGCCCGGCCCAGGTGAAGAAAGAACC...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372809.5
ENST00000372811.10
CDS-3UTR CCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGATCATCCGATAGGCGGTaGCAGAATCCCGCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRSSDRR*QNPAQS
Trigger: AGACTGAGCGGGATTCTGCCACCGCCTATCGGATGA...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCTCATCCGATAGGCGGTaGCAGAATCCCGCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPSSDRR*QNPAQS
Trigger: AGACTGAGCGGGATTCTGCCACCGCCTATCGGATGA...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCTTGATGTATGGGCCGTaGCTCATGACCAGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPLMYGP*LMTSRR
Trigger: CCTACGGCTGGTCATGAGCCACGGCCCATACATCAA...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGAGAACCACTGCCAGATaGGAATGGTTAAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLRTTAR*EWLKWP
Trigger: CGGCCACTTTAACCATTCCCATCTGGCAGTGGTTCT...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGTCGGTTCCATGGAAGTaGGGCTGCTTCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQSVPWK*GCFRWK
Trigger: CTTCCATCTGAAGCAGCCCCACTTCCATGGAACCGA...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCATGGGCTCGGTTCCATaGAAGTGGGGCTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPMGSVP*KWGCFR
Trigger: TCTGAAGCAGCCCCACTTCCATGGAACCGAGCCCAT...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTGAACTATGGGAGCCATaGTCACGAGCATGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPELWEP*SRACSV
Trigger: CACTGAACATGCTCGTGACCATGGCTCCCATAGTTC...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGAGCACAGCAAGTGTCCTaGGCCACCTCCTTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRAQQVS*ATSLSL
Trigger: AAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGC...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGCGCCCAGGATCAGGATaGCAGCACAGATTATATAGA +
Preference number: 4 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLRPGSG*QHRLYR
Trigger: TCTATATAATCTGTGCTGTCATCCTGATCCTGGGCG...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCGATGGAAGTCGTCAATaGCATCAGGCAGCATGGACC +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPDGSRQ*HQAAWT
Trigger: GGTCCATGCTGCCTGATGTCATTGACGACTTCCATC...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGGTAGAAATGCCCAGTaGCACTCCAGAGGCAAACTT +
Preference number: 4 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSGRNAQ*HSRGKL
Trigger: AAGTTTGCCTCTGGAGTGTCACTGGGCATTTCTACC...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCGGTAGAAATGCCCAGTaGCACTCCAGAGGCAAACTT +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVGRNAQ*HSRGKL
Trigger: AAGTTTGCCTCTGGAGTGTCACTGGGCATTTCTACC...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGAGAATCCCGCTCAGTCTaGTCGGTGCTGATGAACATG +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRESRSV*SVLMNM
Trigger: CATGTTCATCAGCACCGAGCAGACTGAGCGGGATTC...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCAGCAGGTATGCCTTTTaGGTTTCCCTGTGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVSRYAF*VSLCEV
Trigger: CACCTCACACAGGGAAACGCAAAAGGCATACCTGCT...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGGATTCTGGAATTCATTaGGGAAGCCCAAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLDSGIH*GSPRCR
Trigger: CCTACACCTTGGGCTTCCGCAATGAATTCCAGAATC...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTGATTCTGGAATTCATTaGGGAAGCCCAAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPDSGIH*GSPRCR
Trigger: CCTACACCTTGGGCTTCCGCAATGAATTCCAGAATC...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGTGGCCCGGGTCAAGAACCACTaGCAGATGGGAATGGTTAAA +
Preference number: 4 (lower is better)
Translates to: CSPAAQQAGRQVLIPSVARVKNH*QMGMVK
Trigger: TTTAACCATTCCCATCTGGCAGTGGTTCTTGACCCG...GGCCACAGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACACACTGATGCCAGCTaGCACAGCTACCGCATATGT +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRHTDAS*HSYRIC
Trigger: ACATATGCGGTAGCTGTGGCAGCTGGCATCAGTGTG...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCTGAGCAGCCAGAGCTaGTGGCCTCGTCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: STLVFRARPDQSLAYSQWLSSQS*WPRPSV
Trigger: CACTGAGGGACGAGGCCAGCAGCTCTGGCTGCTCAG...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGAGCTATTGAGGTCCTaGAAACAAGGCGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSELLRS*KQGVSA
Trigger: AGCAGACACGCCTTGTTTCCAGGACCTCAATAGCTC...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCGAGCTATTGAGGTCCTaGAAACAAGGCGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVELLRS*KQGVSA
Trigger: AGCAGACACGCCTTGTTTCCAGGACCTCAATAGCTC...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGAGCTATTGAGGTCCTaGAAACAAGGCGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQELLRS*KQGVSA
Trigger: AGCAGACACGCCTTGTTTCCAGGACCTCAATAGCTC...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTGTGGTGCCATGTGTATaGTTGGCACTTTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPVVPCV*LALCEA
Trigger: AGCTTCACAAAGTGCCAACCATACACATGGCACCAC...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCTTTCCCTGTGTGAGGTaGTGCCATGTGTATGGTTGG +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVFPCVR*CHVYGW
Trigger: CCAACCATACACATGGCACCACCTCACACAGGGAAA...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCGCCAGGAGTAGATTCTaGAATTCATTGCGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVARSRF*NSLRKP
Trigger: GGGCTTCCGCAATGAATTCCAGAATCTACTCCTGGC...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGAGAACCACTGCCAGATaGGAATGGTTAAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRRTTAR*EWLKWP
Trigger: CGGCCACTTTAACCATTCCCATCTGGCAGTGGTTCT...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTGGGGCTGCTTCAGATaGAAGTCGTCAATGACATCA +
Preference number: 4 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPWGCFR*KSSMTS
Trigger: TGATGTCATTGACGACTTCCATCTGAAGCAGCCCCA...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGTGGCCTGGGGCTGCTTCAGATaGAAGTCGTCAATGACATCA +
Preference number: 4 (lower is better)
Translates to: CSPAAQQAGRQVLIPSVAWGCFR*KSSMTS
Trigger: TGATGTCATTGACGACTTCCATCTGAAGCAGCCCCA...GGCCACAGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCTCGGTTCCATGGAAGTaGGGCTGCTTCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPSVPWK*GCFRWK
Trigger: CTTCCATCTGAAGCAGCCCCACTTCCATGGAACCGA...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGGAACTATGGGAGCCATaGTCACGAGCATGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRELWEP*SRACSV
Trigger: CACTGAACATGCTCGTGACCATGGCTCCCATAGTTC...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGAGCAGCCAGAGCTGCTaGCCTCGTCCCTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: STLVFRARPDQSLAYSQWSSQSC*PRPSVP
Trigger: AGGCACTGAGGGACGAGGCCAGCAGCTCTGGCTGCT...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGTGCTTTGGAGGATaGTGGTGGGTAGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: STLVFRARPDQSLAYSQWQCFGG*WWVAAP
Trigger: CGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTG...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTAGCCCAAGGTGTAGGTaGAAAACAAGACAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPSPRCR*KTRQSS
Trigger: GGAACTTTGTCTTGTTTTGCACCTACACCTTGGGCT...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCGGGTCAAGAACCACTaGCAGATGGGAATGGTTAAA +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVRVKNH*QMGMVK
Trigger: TTTAACCATTCCCATCTGGCAGTGGTTCTTGACCCG...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGCGGGTCAAGAACCACTaGCAGATGGGAATGGTTAAA +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQRVKNH*QMGMVK
Trigger: TTTAACCATTCCCATCTGGCAGTGGTTCTTGACCCG...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCGTGGTGCCATGTGTATaGTTGGCACTTTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVVVPCV*LALCEA
Trigger: AGCTTCACAAAGTGCCAACCATACACATGGCACCAC...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGTGGTGCCATGTGTATaGTTGGCACTTTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQVVPCV*LALCEA
Trigger: AGCTTCACAAAGTGCCAACCATACACATGGCACCAC...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGATTTCCCTGTGTGAGGTaGTGCCATGTGTATGGTTGG +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRFPCVR*CHVYGW
Trigger: CCAACCATACACATGGCACCACCTCACACAGGGAAA...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGAATAAGTTTGATGTATaGGCCGTGGCTCATGACCAG +
Preference number: 4 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLNKFDV*AVAHDQ
Trigger: CTGGTCATGAGCCACGGCCCATACATCAAACTTATT...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCGCCAGGAGTAGATTCTaGAATTCATTGCGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPARSRF*NSLRKP
Trigger: GGGCTTCCGCAATGAATTCCAGAATCTACTCCTGGC...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCAGAACCACTGCCAGATaGGAATGGTTAAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPRTTAR*EWLKWP
Trigger: CGGCCACTTTAACCATTCCCATCTGGCAGTGGTTCT...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTGGGGCTGCTTCAGATaGAAGTCGTCAATGACATCA +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRWGCFR*KSSMTS
Trigger: TGATGTCATTGACGACTTCCATCTGAAGCAGCCCCA...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCAGAAGGAGAAGAAGATaGGCTCGGTTCCATGGAAGT +
Preference number: 4 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVRRRRR*ARFHGS
Trigger: ACTTCCATGGAACCGAGCCCATCTTCTTCTCCTTCT...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTAGCCCAAGGTGTAGGTaGAAAACAAGACAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSSPRCR*KTRQSS
Trigger: GGAACTTTGTCTTGTTTTGCACCTACACCTTGGGCT...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCGATTCTGGAATTCATTaGGGAAGCCCAAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPDSGIH*GSPRCR
Trigger: CCTACACCTTGGGCTTCCGCAATGAATTCCAGAATC...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGGGGCGTTCAGTGCTTTaGAGGATGCTGGTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: STLVFRARPDQSLAYSQWGRSVL*RMLVGS
Trigger: GCTACCCACCAGCATCCTCCAAAGCACTGAACGCCC...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGATAGGTCTGGCCGTGTaGGAAGTCGGGCACGAACCA +
Preference number: 4 (lower is better)
Translates to: STLVFRARPDQSLAYSQWIGLAV*EVGHEP
Trigger: TGGTTCGTGCCCGACTTCCCACACGGCCAGACCTAT...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTTGCCATGTGTATGGTTaGCACTTTGTGAAGCTACTG +
Preference number: 4 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSCHVYG*HFVKLL
Trigger: CAGTAGCTTCACAAAGTGCCAACCATACACATGGCA...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGAATAAGTTTGATGTATaGGCCGTGGCTCATGACCAG +
Preference number: 4 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRNKFDV*AVAHDQ
Trigger: CTGGTCATGAGCCACGGCCCATACATCAAACTTATT...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGAAGAAGGAGAAGAAGATaGGCTCGGTTCCATGGAAGT +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRRRRRR*ARFHGS
Trigger: ACTTCCATGGAACCGAGCCCATCTTCTTCTCCTTCT...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCAGAAGGAGAAGAAGATaGGCTCGGTTCCATGGAAGT +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPRRRRR*ARFHGS
Trigger: ACTTCCATGGAACCGAGCCCATCTTCTTCTCCTTCT...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGATGGTTGGCACTTTGTaGAGCTACTGTAGAGCTATT +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQMVGTL*SYCRAI
Trigger: AATAGCTCTACAGTAGCTTCACAAAGTGCCAACCAT...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGAGGCAAACTTGGTaGAGAAGACATAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRQRQTW*RRHRRR
Trigger: TCTCCTTCTATGTCTTCTTCACCAAGTTTGCCTCTG...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCCAGAGGCAAACTTGGTaGAGAAGACATAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPQRQTW*RRHRRR
Trigger: TCTCCTTCTATGTCTTCTTCACCAAGTTTGCCTCTG...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCAGCCCAAGGTGTAGGTaGAAAACAAGACAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPSPRCR*KTRQSS
Trigger: GGAACTTTGTCTTGTTTTGCACCTACACCTTGGGCT...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGTCATCCGATAGGCGGTaGCAGAATCCCGCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: STLVFRARPDQSLAYSQWSSDRR*QNPAQS
Trigger: AGACTGAGCGGGATTCTGCCACCGCCTATCGGATGA...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGATGCCATGTGTATGGTTaGCACTTTGTGAAGCTACTG +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRCHVYG*HFVKLL
Trigger: CAGTAGCTTCACAAAGTGCCAACCATACACATGGCA...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGAAATAAGTTTGATGTATaGGCCGTGGCTCATGACCAG +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRNKFDV*AVAHDQ
Trigger: CTGGTCATGAGCCACGGCCCATACATCAAACTTATT...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCATGGTTGGCACTTTGTaGAGCTACTGTAGAGCTATT +
Preference number: 4 (lower is better)
Translates to: PTVSTASVLGHLLESSVPMVGTL*SYCRAI
Trigger: AATAGCTCTACAGTAGCTTCACAAAGTGCCAACCAT...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGAATGGTTGGCACTTTGTaGAGCTACTGTAGAGCTATT +
Preference number: 4 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRMVGTL*SYCRAI
Trigger: AATAGCTCTACAGTAGCTTCACAAAGTGCCAACCAT...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAATGGGGTACATTTTaGAGAGCAGCAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: STLVFRARPDQSLAYSQWQWGTF*RAAGPA
Trigger: TGCTGGGCCTGCTGCTCTTCAAAATGTACCCCATTG...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTCATAGCAAAGCTTGTTaGAAACAGACAACTGTTGTT +
Preference number: 4 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPHSKAC*KQTTVV
Trigger: AACAACAGTTGTCTGTTTGCAACAAGCTTTGCTATG...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372809.5
ENST00000372811.10
CDS-3UTR GCA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCACACTGATGCCAGCTaGCACAGCTACCGCATATGT +
Preference number: 4 (lower is better)
Translates to: STLVFRARPDQSLAYSQWHTDAS*HSYRIC
Trigger: ACATATGCGGTAGCTGTGGCAGCTGGCATCAGTGTG...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR GCA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGCATAGCAAAGCTTGTTaGAAACAGACAACTGTTGTT +
Preference number: 4 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQHSKAC*KQTTVV
Trigger: AACAACAGTTGTCTGTTTGCAACAAGCTTTGCTATG...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372809.5
ENST00000372811.10
CDS-3UTR CCA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGGAACTATGGGAGCCATaGTCACGAGCATGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: STLVFRARPDQSLAYSQWELWEP*SRACSV
Trigger: CACTGAACATGCTCGTGACCATGGCTCCCATAGTTC...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR TCA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCGCCCAGGATCAGGATaGCAGCACAGATTATATAGA +
Preference number: 4 (lower is better)
Translates to: STLVFRARPDQSLAYSQWRPGSG*QHRLYR
Trigger: TCTATATAATCTGTGCTGTCATCCTGATCCTGGGCG...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS TCA 90 bp GCAGCCCCGCCGCGGAGCCGCTCTCGGCGCCTTCTCCTTTGGCCATaGCCCGCGGGCCACGCCGCTTGGGACCTGGTAGACGGGATGCTC +
Preference number: 5 (lower is better)
Translates to: AAPPRSRSRRLLLWP*PAGHAAWDLVDGML
Trigger: GAGCATCCCGTCTACCAGGTCCCAAGCGGCGTGGCCCGCGGGTCATGGCCAAAGGAGAAGGCGCCGAGAGCGGCTCCGCGGCGGGGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000483824.5
CDS GCA 90 bp GCTTGGGACCTGGTAGACGGGATGCTCCTCTGCCCCGCAGGCCGCTaGTCCTCCCAAGCTCGCTTCGTAGCAGCCTTAGCCACGGCCGCC +
Preference number: 5 (lower is better)
Translates to: AWDLVDGMLLCPAGR*SSQARFVAALATAA
Trigger: GGCGGCCGTGGCTAAGGCTGCTACGAAGCGAGCTTGGGAGGAGCAGCGGCCTGCGGGGCAGAGGAGCATCCCGTCTACCAGGTCCCAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000483824.5
CDS GCA 90 bp CAGGGGCGTGGAGAAGATGATCCTTCACCTGGGCCGGGCGTTCAGTaGTTTGGAGGATGCTGGTGGGTAGCAGCCCCGCCGCGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: QGRGEDDPSPGPGVQ*FGGCWWVAAPPRSR
Trigger: GCGGCTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGGATCATCTTCTCCACGCCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420632.6
CDS CCA 90 bp GATCCTTCACCTGGGCCGGGCGTTCAGTGCTTTGGAGGATGCTGGTaGGTAGCAGCCCCGCCGCGGAGCCGCTCTCGGCGCCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: DPSPGPGVQCFGGCW*VAAPPRSRSRRLLL
Trigger: AAGGAGAAGGCGCCGAGAGCGGCTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420632.6
CDS GCA 90 bp TCGGTTCTTTCTTCACCTGGGCCGGGCGTTCAGTGCTTTGGAGGATaGTGGTGGGTAGCAGCCCCGCCGCGGAGCCGCTCTCGGCGCCTT +
Preference number: 5 (lower is better)
Translates to: SVLSSPGPGVQCFGG*WWVAAPPRSRSRRL
Trigger: AAGGCGCCGAGAGCGGCTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGAAAGAACCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000483824.5
CDS GCA 90 bp GAAGATGATCCTTCACCTGGGCCGGGCGTTCAGTGCTTTGGAGGATaGTGGTGGGTAGCAGCCCCGCCGCGGAGCCGCTCTCGGCGCCTT +
Preference number: 5 (lower is better)
Translates to: EDDPSPGPGVQCFGG*WWVAAPPRSRSRRL
Trigger: AAGGCGCCGAGAGCGGCTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGGATCATCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420632.6
CDS CCA 90 bp CTTTCTTCACCTGGGCCGGGCGTTCAGTGCTTTGGAGGATGCTGGTaGGTAGCAGCCCCGCCGCGGAGCCGCTCTCGGCGCCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: LSSPGPGVQCFGGCW*VAAPPRSRSRRLLL
Trigger: AAGGAGAAGGCGCCGAGAGCGGCTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000483824.5
CDS-3UTR CAA 90 bp TGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGTGGCCCGCGGGCCACGCCGCTaGGGACCTGGTAGACGGGAT +
Preference number: 5 (lower is better)
Translates to: CSPAAQQAGRQVLIPSVARGPRR*GPGRRD
Trigger: ATCCCGTCTACCAGGTCCCAAGCGGCGTGGCCCGCG...GGCCACAGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGTCGGCGCCTTCTCCTTaGGCCATGACCCGCGGGCCA +
Preference number: 5 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLSAPSP*AMTRGP
Trigger: TGGCCCGCGGGTCATGGCCAAAGGAGAAGGCGCCGA...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS GCA 90 bp TCTTTTTCGGTTCTTTCTGGGCCGGGCGTTCAGTGCTTTGGAGGATaGTGGTGGGTAGCAGCCCCGCCGCGGAGCCGCTCTCGGCGCCTT +
Preference number: 5 (lower is better)
Translates to: SFSVLSGPGVQCFGG*WWVAAPPRSRSRRL
Trigger: AAGGCGCCGAGAGCGGCTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGAAAGAACCGAAAAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434861.5
CDS-3UTR CAA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCCGCGGGCCACGCCGCTaGGGACCTGGTAGACGGGAT +
Preference number: 5 (lower is better)
Translates to: PTVSTASVLGHLLESSVPRGPRR*GPGRRD
Trigger: ATCCCGTCTACCAGGTCCCAAGCGGCGTGGCCCGCG...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGATCGGCGCCTTCTCCTTaGGCCATGACCCGCGGGCCA +
Preference number: 5 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRSAPSP*AMTRGP
Trigger: TGGCCCGCGGGTCATGGCCAAAGGAGAAGGCGCCGA...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTCAGGTCCAGGGGGATTaGCTGATGCAGAGGCCCACC +
Preference number: 5 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPQVQGD*LMQRPT
Trigger: GGTGGGCCTCTGCATCAGCAAATCCCCCTGGACCTG...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372809.5
ENST00000372811.10
CDS-3UTR CAA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGTGCTTGGCCCACGATTaGTCCCTGGATCGCCGTGCC +
Preference number: 5 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLCLAHD*SLDRRA
Trigger: GGCACGGCGATCCAGGGACAAATCGTGGGCCAAGCA...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTGCTTGGCCCACGATTaGTCCCTGGATCGCCGTGCC +
Preference number: 5 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPCLAHD*SLDRRA
Trigger: GGCACGGCGATCCAGGGACAAATCGTGGGCCAAGCA...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS CCA 90 bp TTCTTTTTCGGTTCTTTCTTCACCTGGGCCGGGCGTTCAGTGCTTTaGAGGATGCTGGTGGGTAGCAGCCCCGCCGCGGAGCCGCTCTCG +
Preference number: 5 (lower is better)
Translates to: FFFGSFFTWAGRSVL*RMLVGSSPAAEPLS
Trigger: CGAGAGCGGCTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGAAAGAACCGAAAAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000483824.5
CDS-3UTR CAA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCTGCTTGGCCCACGATTaGTCCCTGGATCGCCGTGCC +
Preference number: 5 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVCLAHD*SLDRRA
Trigger: GGCACGGCGATCCAGGGACAAATCGTGGGCCAAGCA...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS GCA 90 bp GTTTCTTCTTTTTCGGTTCTTTCTTCACCTGGGCCGGGCGTTCAGTaGTTTGGAGGATGCTGGTGGGTAGCAGCCCCGCCGCGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: VSSFSVLSSPGPGVQ*FGGCWWVAAPPRSR
Trigger: GCGGCTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGAAAGAACCGAAAAAGAAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000483824.5
CDS-3UTR CAA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCAGGGGGATTaGCTGATGCAGAGGCCCACC +
Preference number: 5 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRQVQGD*LMQRPT
Trigger: GGTGGGCCTCTGCATCAGCAAATCCCCCTGGACCTG...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372809.5
ENST00000372811.10
CDS-3UTR CAA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGACAAGGCGTGTCTGCTaGGCCCACGATTTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLTRRVC*AHDLSL
Trigger: CAGGGACAAATCGTGGGCCAAGCAGACACGCCTTGT...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCCCGGAAGTAGGCGATaGGCTCAGACTGCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVPGSRR*AQTAGL
Trigger: AAGCCCAGCAGTCTGAGCCAATCGCCTACTTCCGGG...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGCCCGGAAGTAGGCGATaGGCTCAGACTGCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQPGSRR*AQTAGL
Trigger: AAGCCCAGCAGTCTGAGCCAATCGCCTACTTCCGGG...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGTCCTGGGCCACCTCCTaGAGTCTTCAGTTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLSWATS*SLQFPS
Trigger: GGAAGGGAACTGAAGACTCAAGGAGGTGGCCCAGGA...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS CCA 90 bp AGGTCCTGGAAACAAGGCGTGTCTGCTTGGCCCACGATTTGTCCCTaGATCGCCGTGCCCAGCACTGTGCCCAGCACTTCCACAGTCATC +
Preference number: 5 (lower is better)
Translates to: RSWKQGVSAWPTICP*IAVPSTVPSTSTVI
Trigger: GATGACTGTGGAAGTGCTGGGCACAGTGCTGGGCACGGCGATCCAGGGACAAATCGTGGGCCAAGCAGACACGCCTTGTTTCCAGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS-3UTR CAA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCGCGGGCCACGCCGCTaGGGACCTGGTAGACGGGAT +
Preference number: 5 (lower is better)
Translates to: STLVFRARPDQSLAYSQWRGPRR*GPGRRD
Trigger: ATCCCGTCTACCAGGTCCCAAGCGGCGTGGCCCGCG...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTTCCTGGGCCACCTCCTaGAGTCTTCAGTTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSSWATS*SLQFPS
Trigger: GGAAGGGAACTGAAGACTCAAGGAGGTGGCCCAGGA...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp TCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGAGGCCCGATCAGTCCTaGGCATATTCACAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: SLPSTCSPAAQQAGRQVLRPDQS*AYSQWQ
Trigger: CTGCCACTGTGAATATGCCAAGGACTGATCGGGCCT...CAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGAGGCCCGATCAGTCCTaGGCATATTCACAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLRPDQS*AYSQWQ
Trigger: CTGCCACTGTGAATATGCCAAGGACTGATCGGGCCT...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS GCA 90 bp GAGCTGCTGGCCTCGTCCCTCAGTGCCTGCAGGGCCTTCTTATTCTaGCGCCGCCTCTCCTCATCAATGGGGTACATTTTGAAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: ELLASSLSACRAFLF*RRLSSSMGYILKSS
Trigger: GCTGCTCTTCAAAATGTACCCCATTGATGAGGAGAGGCGGCGGCAGAATAAGAAGGCCCTGCAGGCACTGAGGGACGAGGCCAGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000480630.5
ENST00000483824.5
CDS CCA 90 bp CTGGGCCTCTGGGAAGAGGCTGATGACCAAGCCCGGAATGGCAGATaGGAACTGGGACCCCAGACTGAAATCCTAGGCATGGAGTGTGAG +
Preference number: 5 (lower is better)
Translates to: LGLWEEADDQARNGR*ELGPQTEILGMECE
Trigger: CTCACACTCCATGCCTAGGATTTCAGTCTGGGGTCCCAGTTCCCATCTGCCATTCCGGGCTTGGTCATCAGCCTCTTCCCAGAGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480630.5
CDS CCA 90 bp CCTTCCTTCCCCATACTCCTGCCAAATCCACCCATCCTGGGCCTCTaGGAAGAGGCTGATGACCAAGCCCGGAATGGCAGATGGGAACTG +
Preference number: 5 (lower is better)
Translates to: PSFPILLPNPPILGL*EEADDQARNGRWEL
Trigger: CAGTTCCCATCTGCCATTCCGGGCTTGGTCATCAGCCTCTTCCCAGAGGCCCAGGATGGGTGGATTTGGCAGGAGTATGGGGAAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480630.5
CDS-3UTR CAA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGAACAAGGCGTGTCTGCTaGGCCCACGATTTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRTRRVC*AHDLSL
Trigger: CAGGGACAAATCGTGGGCCAAGCAGACACGCCTTGT...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCACAAGGCGTGTCTGCTaGGCCCACGATTTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: PTVSTASVLGHLLESSVPTRRVC*AHDLSL
Trigger: CAGGGACAAATCGTGGGCCAAGCAGACACGCCTTGT...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS GCA 90 bp GCCATGGTCACGAGCATGTTCAGTGTAAACTTGACACGTTCCGGCTaGGAGCAGCCACGGGTCTGGTACCCTGCAAAGTCCAGACTGAGG +
Preference number: 5 (lower is better)
Translates to: AMVTSMFSVNLTRSG*EQPRVWYPAKSRLR
Trigger: CCTCAGTCTGGACTTTGCAGGGTACCAGACCCGTGGCTGCTCGCAGCCGGAACGTGTCAAGTTTACACTGAACATGCTCGTGACCATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000459917.1
ENST00000480630.5
ENST00000483824.5
ENST00000491515.5
CDS-3UTR CAA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGGCTACTGTAGAGCTATaGAGGTCCTGGAAACAAGGC +
Preference number: 5 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLATVEL*RSWKQG
Trigger: GCCTTGTTTCCAGGACCTCAATAGCTCTACAGTAGC...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp CCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTGCTACTGTAGAGCTATaGAGGTCCTGGAAACAAGGC +
Preference number: 5 (lower is better)
Translates to: PSTCSPAAQQAGRQVLIPATVEL*RSWKQG
Trigger: GCCTTGTTTCCAGGACCTCAATAGCTCTACAGTAGC...AGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp CGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGGCTTGATGTTCAGTGTAAACTaGACACGTTCCGGCTGCGAG +
Preference number: 5 (lower is better)
Translates to: RARPDQSLAYSQWQPQGLMFSVN*TRSGCE
Trigger: CTCGCAGCCGGAACGTGTCAAGTTTACACTGAACAT...CAAGCCCTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS GCA 90 bp AAGAAAAGGCCTCTTGCTCTAAGAGGAAGTAACCCTGCCTGGAGGTaGTCAGCGTGGCAAGTGGAGCCCAGGCCAGATTACAGCCCCCAT +
Preference number: 5 (lower is better)
Translates to: KKRPLALRGSNPAWR*SAWQVEPRPDYSPH
Trigger: ATGGGGGCTGTAATCTGGCCTGGGCTCCACTTGCCACGCTGAGCACCTCCAGGCAGGGTTACTTCCTCTTAGAGCAAGAGGCCTTTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481612.1
CDS CCA 90 bp ATACAGCTGTCTTCTTGCCAAACCGGGTCAAGAACCACTGCCAGATaGGAATGGTTAAAGTGGCCGAGAGCTCTCTGCTCCCGCACGCCC +
Preference number: 5 (lower is better)
Translates to: IQLSSCQTGSRTTAR*EWLKWPRALCSRTP
Trigger: GGGCGTGCGGGAGCAGAGAGCTCTCGGCCACTTTAACCATTCCCATCTGGCAGTGGTTCTTGACCCGGTTTGGCAAGAAGACAGCTGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480630.5
CDS-3UTR CAA 90 bp TCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGGCTACTGTAGAGCTATaGAGGTCCTGGAAACAAGGC +
Preference number: 5 (lower is better)
Translates to: SVPFLAPAVQLLSKPADRATVEL*RSWKQG
Trigger: GCCTTGTTTCCAGGACCTCAATAGCTCTACAGTAGC...CCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp TGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGTGGCCAAGCCAGTAATAAGTTaGATGTATGGGCCGTGGCTC +
Preference number: 5 (lower is better)
Translates to: CSPAAQQAGRQVLIPSVAKPVIS*MYGPWL
Trigger: GAGCCACGGCCCATACATCAAACTTATTACTGGCTT...GGCCACAGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCATGTTCAGTGTAAACTaGACACGTTCCGGCTGCGAG +
Preference number: 5 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVMFSVN*TRSGCE
Trigger: CTCGCAGCCGGAACGTGTCAAGTTTACACTGAACAT...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGGTGCCATGTGTATGGTaGGCACTTTGTGAAGCTACT +
Preference number: 5 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQVPCVW*ALCEAT
Trigger: AGTAGCTTCACAAAGTGCCAACCATACACATGGCAC...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp AGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCCTGATCCCTTCTGTGCCATGTGTATGGTaGGCACTTTGTGAAGCTACT +
Preference number: 5 (lower is better)
Translates to: STCSPAAQQAGRQVLIPSVPCVW*ALCEAT
Trigger: AGTAGCTTCACAAAGTGCCAACCATACACATGGCAC...AGAAGGGATCAGGACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCCCGGAAGTAGGCGATaGGCTCAGACTGCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: STLVFRARPDQSLAYSQWPGSRR*AQTAGL
Trigger: AAGCCCAGCAGTCTGAGCCAATCGCCTACTTCCGGG...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp GTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGCAGCCCCAGAAGCCAGTAATAAGTTaGATGTATGGGCCGTGGCTC +
Preference number: 5 (lower is better)
Translates to: VFRARPDQSLAYSQWQPQKPVIS*MYGPWL
Trigger: GAGCCACGGCCCATACATCAAACTTATTACTGGCTT...CTGGGGCTGCCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp AGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGACAGGTCTATACAGCTGTCTTCTaGCCAAACCGGGTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: SSLPSTCSPAAQQAGRQVYTAVF*PNRVKN
Trigger: GTTCTTGACCCGGTTTGGCAAGAAGACAGCTGTATA...GACCTGTCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS TCA 90 bp GAGGTTACTCTCCATGAGGGCCACCAAGATGAGAAATGGCACTGCTaGCTAGGGAAGGGGGTGCAGGAAGATGAATCAGCTGGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: EVTLHEGHQDEKWHC*LGKGVQEDESAGRF
Trigger: GAACCTCCCAGCTGATTCATCTTCCTGCACCCCCTTCCCTAGTCAGCAGTGCCATTTCTCATCTTGGTGGCCCTCATGGAGAGTAACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459917.1
ENST00000481612.1
ENST00000491515.5
CDS CCA 90 bp TGCCAAACCGGGTCAAGAACCACTGCCAGATGGGAATGGTTAAAGTaGCCGAGAGCTGTGGATGGACAAAGGGGGTTAAAGGGAGGTGCT +
Preference number: 5 (lower is better)
Translates to: CQTGSRTTARWEWLK*PRAVDGQRGLKGGA
Trigger: AGCACCTCCCTTTAACCCCCTTTGTCCATCCACAGCTCTCGGCCACTTTAACCATTCCCATCTGGCAGTGGTTCTTGACCCGGTTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459917.1
CDS CCA 90 bp GAGAAGAAGATGGGCTCGGTTCCATGGAAGTGGGGCTGCTTCAGATaGAAGTCGTCAATGACATCAGGCAGCATGGACCATGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: EKKMGSVPWKWGCFR*KSSMTSGSMDHDGQ
Trigger: CTGGCCATCATGGTCCATGCTGCCTGATGTCATTGACGACTTCCATCTGAAGCAGCCCCACTTCCATGGAACCGAGCCCATCTTCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483824.5
CDS-3UTR CAA 90 bp GTCTTCAGTTCCCTTCCTAGCACCTGCAGTCCAGCTGCTCAGCAAGCCGGCAGAAAGCCAGTAATAAGTTaGATGTATGGGCCGTGGCTC +
Preference number: 5 (lower is better)
Translates to: VFSSLPSTCSPAAQQAGRKPVIS*MYGPWL
Trigger: GAGCCACGGCCCATACATCAAACTTATTACTGGCTT...TCTGCCGGCTTGCTGAGCAGCTGGACTGCAGGTGCTAGGAAGGGAACTGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS-3UTR CAA 90 bp CCCACAGTGAGCACAGCAAGTGTCCTGGGCCACCTCCTTGAGTCTTCAGTTCCCTATACAGCTGTCTTCTaGCCAAACCGGGTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: PTVSTASVLGHLLESSVPYTAVF*PNRVKN
Trigger: GTTCTTGACCCGGTTTGGCAAGAAGACAGCTGTATA...GGGAACTGAAGACTCAAGGAGGTGGCCCAGGACACTTGCTGTGCTCACTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS GCA 90 bp GAAACCCAGGGCACAGCCCGTCACCTGGTAGGGGGCTCCCCCAAGTaGATAGCAAAGCTTGTTGCAAACAGACAACTGTTGTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: ETQGTARHLVGGSPK*IAKLVANRQLLFLL
Trigger: AAGAAGAAACAACAGTTGTCTGTTTGCAACAAGCTTTGCTATGCACTTGGGGGAGCCCCCTACCAGGTGACGGGCTGTGCCCTGGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000434861.5
ENST00000483824.5
CDS CCA 90 bp GAGAAGAAGATGGGCTCGGTTCCATGGAAGTGGGGCTGCTTCAGATaGAAGTCGTCAATGACATCAGGCAGCATGGACCAGGGTAGTAAG +
Preference number: 5 (lower is better)
Translates to: EKKMGSVPWKWGCFR*KSSMTSGSMDQGSK
Trigger: CTTACTACCCTGGTCCATGCTGCCTGATGTCATTGACGACTTCCATCTGAAGCAGCCCCACTTCCATGGAACCGAGCCCATCTTCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000459917.1
ENST00000480630.5
ENST00000491515.5
CDS CCA 90 bp ATACAGCTGTCTTCTTGCCAAACCGGGTCAAGAACCACTGCCAGATaGGAATGGTTAAAGTGGCCGAGAGCTGTGGATGGACAAAGGGGG +
Preference number: 5 (lower is better)
Translates to: IQLSSCQTGSRTTAR*EWLKWPRAVDGQRG
Trigger: CCCCCTTTGTCCATCCACAGCTCTCGGCCACTTTAACCATTCCCATCTGGCAGTGGTTCTTGACCCGGTTTGGCAAGAAGACAGCTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459917.1
CDS CCA 90 bp ATGAATAAGAAAAGGCCTCTTGCTCTAAGAGGAAGTAACCCTGCCTaGAGGTGCTCAGCGTGGCAAGTGGAGCCCAGGCCAGATTACAGC +
Preference number: 5 (lower is better)
Translates to: MNKKRPLALRGSNPA*RCSAWQVEPRPDYS
Trigger: GCTGTAATCTGGCCTGGGCTCCACTTGCCACGCTGAGCACCTCCAGGCAGGGTTACTTCCTCTTAGAGCAAGAGGCCTTTTCTTATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481612.1
CDS-3UTR CAA 90 bp TCTACATTAGTGTTCCGGGCTAGGCCCGATCAGTCCTTGGCATATTCACAGTGGAGGCCCGATCAGTCCTaGGCATATTCACAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: STLVFRARPDQSLAYSQWRPDQS*AYSQWQ
Trigger: CTGCCACTGTGAATATGCCAAGGACTGATCGGGCCT...CCACTGTGAATATGCCAAGGACTGATCGGGCCTAGCCCGGAACACTAATGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
CDS CCA 90 bp TTCAAAGAGGCAATAGAAAAGCAGGTACCAATAGGTCTGGCCGTGTaGGAAGTCGGGCACGAACCAGATGAGGAAGTAGGCAATGACGGC +
Preference number: 5 (lower is better)
Translates to: FKEAIEKQVPIGLAV*EVGHEPDEEVGNDG
Trigger: GCCGTCATTGCCTACTTCCTCATCTGGTTCGTGCCCGACTTCCCACACGGCCAGACCTATTGGTACCTGCTTTTCTATTGCCTCTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS CCA 90 bp CTGTCTTCTTGCCAAACCGGGTCAAGAACCACTGCCAGATGGGAATaGTTAAAGTGGCCGAGAGCTGTGGATGGACAAAGGGGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: LSSCQTGSRTTARWE*LKWPRAVDGQRGLK
Trigger: CTTTAACCCCCTTTGTCCATCCACAGCTCTCGGCCACTTTAACCATTCCCATCTGGCAGTGGTTCTTGACCCGGTTTGGCAAGAAGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459917.1
CDS CCA 90 bp AGGTATGCCTTTTGCGTTTCCCTGTGTGAGGTGGTGCCATGTGTATaGTTGGCACTTTGTGAAGCTACTGTAGAGCTATTGAGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RYAFCVSLCEVVPCV*LALCEATVELLRSW
Trigger: CCAGGACCTCAATAGCTCTACAGTAGCTTCACAAAGTGCCAACCATACACATGGCACCACCTCACACAGGGAAACGCAAAAGGCATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS GCA 90 bp TCAGTGTTCCCCCTCTGTAAATGGATACAACTAAGATGCGATGCTTaGCAAGTTAGATGCTACACAGAGAAGACAGCTGGTGCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: SVFPLCKWIQLRCDA*QVRCYTEKTAGAGA
Trigger: GGCTCCTGCACCAGCTGTCTTCTCTGTGTAGCATCTAACTTGGCAAGCATCGCATCTTAGTTGTATCCATTTACAGAGGGGGAACACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469745.5
CDS CCA 90 bp TCCACACCATCAAAAGGGGTTAGACCTCAGGATGGACTAACTTCATaGCATCAGTATAGCAAGGCAGCACAGGCCATGGTAAAGAGAAAG +
Preference number: 5 (lower is better)
Translates to: STPSKGVRPQDGLTS*HQYSKAAQAMVKRK
Trigger: CTTTCTCTTTACCATGGCCTGTGCTGCCTTGCTATACTGATGCCATGAAGTTAGTCCATCCTGAGGTCTAACCCCTTTTGATGGTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480630.5
CDS CCA 72 bp CCTGGGCCGGGCGTTCAGTGCTTTGGAGGATGCTGGTaGGTAGCAGCCCCGCCGCGGAGCCGCTCTCGGCGC +
Preference number: 6 (lower is better)
Translates to: PGPGVQCFGGCW*VAAPPRSRSRR
Trigger: GCGCCGAGAGCGGCTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000483824.5
CDS CAA 90 bp GTGGGTAGCAGCCCCGCCGCGGAGCCGCTCTCGGCGCCTTCTCCTTaGGCCATGACCCGCGGGCCACGCCGCTTGGGACCTGGTAGACGG +
Preference number: 6 (lower is better)
Translates to: VGSSPAAEPLSAPSP*AMTRGPRRLGPGRR
Trigger: CCGTCTACCAGGTCCCAAGCGGCGTGGCCCGCGGGTCATGGCCAAAGGAGAAGGCGCCGAGAGCGGCTCCGCGGCGGGGCTGCTACCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000483824.5
CDS TCA 72 bp CCGCGGAGCCGCTCTCGGCGCCTTCTCCTTTGGCCATaGCCCGCGGGCCACGCCGCTTGGGACCTGGTAGAC +
Preference number: 6 (lower is better)
Translates to: PRSRSRRLLLWP*PAGHAAWDLVD
Trigger: GTCTACCAGGTCCCAAGCGGCGTGGCCCGCGGGTCATGGCCAAAGGAGAAGGCGCCGAGAGCGGCTCCGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000483824.5
CDS CCA 72 bp TCTGGGCCGGGCGTTCAGTGCTTTGGAGGATGCTGGTaGGTAGCAGCCCCGCCGCGGAGCCGCTCTCGGCGC +
Preference number: 6 (lower is better)
Translates to: SGPGVQCFGGCW*VAAPPRSRSRR
Trigger: GCGCCGAGAGCGGCTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434861.5
CDS CAA 90 bp CTCTCGGCGCCTTCTCCTTTGGCCATGACCCGCGGGCCACGCCGCTaGGGACCTGGTAGACGGGATGCTCCTCTGCCCCGCAGGCCGCTG +
Preference number: 6 (lower is better)
Translates to: LSAPSPLAMTRGPRR*GPGRRDAPLPRRPL
Trigger: CAGCGGCCTGCGGGGCAGAGGAGCATCCCGTCTACCAGGTCCCAAGCGGCGTGGCCCGCGGGTCATGGCCAAAGGAGAAGGCGCCGAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000483824.5
CDS GCA 72 bp CACGCCGCTTGGGACCTGGTAGACGGGATGCTCCTCTaGCCCGCAGGCCGCTGCTCCTCCCAAGCTCGCTTC +
Preference number: 6 (lower is better)
Translates to: HAAWDLVDGMLL*PAGRCSSQARF
Trigger: GAAGCGAGCTTGGGAGGAGCAGCGGCCTGCGGGGCAGAGGAGCATCCCGTCTACCAGGTCCCAAGCGGCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000483824.5
CDS GCA 72 bp CCTTCACCTGGGCCGGGCGTTCAGTGCTTTGGAGGATaGTGGTGGGTAGCAGCCCCGCCGCGGAGCCGCTCT +
Preference number: 6 (lower is better)
Translates to: PSPGPGVQCFGG*WWVAAPPRSRS
Trigger: AGAGCGGCTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420632.6
CDS CAA 72 bp CCTTCTCCTTTGGCCATGACCCGCGGGCCACGCCGCTaGGGACCTGGTAGACGGGATGCTCCTCTGCCCCGC +
Preference number: 6 (lower is better)
Translates to: PSPLAMTRGPRR*GPGRRDAPLPR
Trigger: GCGGGGCAGAGGAGCATCCCGTCTACCAGGTCCCAAGCGGCGTGGCCCGCGGGTCATGGCCAAAGGAGAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000483824.5
CDS GCA 72 bp TCTTCACCTGGGCCGGGCGTTCAGTGCTTTGGAGGATaGTGGTGGGTAGCAGCCCCGCCGCGGAGCCGCTCT +
Preference number: 6 (lower is better)
Translates to: SSPGPGVQCFGG*WWVAAPPRSRS
Trigger: AGAGCGGCTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000483824.5
CDS GCA 72 bp CTGGTAGACGGGATGCTCCTCTGCCCCGCAGGCCGCTaGTCCTCCCAAGCTCGCTTCGTAGCAGCCTTAGCC +
Preference number: 6 (lower is better)
Translates to: LVDGMLLCPAGR*SSQARFVAALA
Trigger: GGCTAAGGCTGCTACGAAGCGAGCTTGGGAGGAGCAGCGGCCTGCGGGGCAGAGGAGCATCCCGTCTACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000483824.5
CDS GCA 72 bp GTTCTTTCTGGGCCGGGCGTTCAGTGCTTTGGAGGATaGTGGTGGGTAGCAGCCCCGCCGCGGAGCCGCTCT +
Preference number: 6 (lower is better)
Translates to: VLSGPGVQCFGG*WWVAAPPRSRS
Trigger: AGAGCGGCTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGAAAGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434861.5
CDS CCA 72 bp GGTTCTTTCTTCACCTGGGCCGGGCGTTCAGTGCTTTaGAGGATGCTGGTGGGTAGCAGCCCCGCCGCGGAG +
Preference number: 6 (lower is better)
Translates to: GSFFTWAGRSVL*RMLVGSSPAAE
Trigger: CTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGAAAGAACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000483824.5
CDS GCA 72 bp GGAGAAGATGATCCTTCACCTGGGCCGGGCGTTCAGTaGTTTGGAGGATGCTGGTGGGTAGCAGCCCCGCCG +
Preference number: 6 (lower is better)
Translates to: GEDDPSPGPGVQ*FGGCWWVAAPP
Trigger: CGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGGATCATCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420632.6
CDS CCA 72 bp CTTCTGTGGCCTTCTGCATGGTGGCTTCGGGCAACGTaGCGGGCCCTAGAGGATGCTAGCCAGCTCTGTGGA +
Preference number: 6 (lower is better)
Translates to: LLWPSAWWLRAT*RALEDASQLCG
Trigger: TCCACAGAGCTGGCTAGCATCCTCTAGGGCCCGCCACGTTGCCCGAAGCCACCATGCAGAAGGCCACAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000480630.5
ENST00000483824.5
CDS CCA 72 bp TTTTTCGGTTCTTTCTGGGCCGGGCGTTCAGTGCTTTaGAGGATGCTGGTGGGTAGCAGCCCCGCCGCGGAG +
Preference number: 6 (lower is better)
Translates to: FFGSFWAGRSVL*RMLVGSSPAAE
Trigger: CTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGAAAGAACCGAAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434861.5
CDS CAA 72 bp GTCCTGGAAACAAGGCGTGTCTGCTTGGCCCACGATTaGTCCCTGGATCGCCGTGCCCAGCACTGTGCCCAG +
Preference number: 6 (lower is better)
Translates to: VLETRRVCLAHD*SLDRRAQHCAQ
Trigger: CTGGGCACAGTGCTGGGCACGGCGATCCAGGGACAAATCGTGGGCCAAGCAGACACGCCTTGTTTCCAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS GCA 72 bp TTTTCGGTTCTTTCTTCACCTGGGCCGGGCGTTCAGTaGTTTGGAGGATGCTGGTGGGTAGCAGCCCCGCCG +
Preference number: 6 (lower is better)
Translates to: FSVLSSPGPGVQ*FGGCWWVAAPP
Trigger: CGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGAAAGAACCGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000483824.5
CDS CCA 72 bp AAACAAGGCGTGTCTGCTTGGCCCACGATTTGTCCCTaGATCGCCGTGCCCAGCACTGTGCCCAGCACTTCC +
Preference number: 6 (lower is better)
Translates to: KQGVSAWPTICP*IAVPSTVPSTS
Trigger: GGAAGTGCTGGGCACAGTGCTGGGCACGGCGATCCAGGGACAAATCGTGGGCCAAGCAGACACGCCTTGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS CAA 90 bp GCTATTGAGGTCCTGGAAACAAGGCGTGTCTGCTTGGCCCACGATTaGTCCCTGGATCGCCGTGCCCAGCACTGTGCCCAGCACTTCCAC +
Preference number: 6 (lower is better)
Translates to: AIEVLETRRVCLAHD*SLDRRAQHCAQHFH
Trigger: GTGGAAGTGCTGGGCACAGTGCTGGGCACGGCGATCCAGGGACAAATCGTGGGCCAAGCAGACACGCCTTGTTTCCAGGACCTCAATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS GCA 72 bp TCTTCTTTTTCGGTTCTTTCTGGGCCGGGCGTTCAGTaGTTTGGAGGATGCTGGTGGGTAGCAGCCCCGCCG +
Preference number: 6 (lower is better)
Translates to: SSFSVLSGPGVQ*FGGCWWVAAPP
Trigger: CGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGAAAGAACCGAAAAAGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434861.5
CDS CCA 72 bp CTAAGAGGAAGTAACCCTGCCTGGAGGTGCTCAGCGTaGCAAGTGGAGCCCAGGCCAGATTACAGCCCCCAT +
Preference number: 6 (lower is better)
Translates to: LRGSNPAWRCSA*QVEPRPDYSPH
Trigger: ATGGGGGCTGTAATCTGGCCTGGGCTCCACTTGCCACGCTGAGCACCTCCAGGCAGGGTTACTTCCTCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481612.1
CDS CCA 72 bp CTTCCTTCCCCATACTCCTGCCAAATCCACCCATCCTaGGCCTCTGGGAAGAGGCTGATGACCAAGCCCGGA +
Preference number: 6 (lower is better)
Translates to: LPSPYSCQIHPS*ASGKRLMTKPG
Trigger: TCCGGGCTTGGTCATCAGCCTCTTCCCAGAGGCCCAGGATGGGTGGATTTGGCAGGAGTATGGGGAAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480630.5
CDS CAA 90 bp AGCTACTGTAGAGCTATTGAGGTCCTGGAAACAAGGCGTGTCTGCTaGGCCCACGATTTGTCCCTGGATCGCCGTGCCCAGCACTGTGCC +
Preference number: 6 (lower is better)
Translates to: SYCRAIEVLETRRVC*AHDLSLDRRAQHCA
Trigger: GGCACAGTGCTGGGCACGGCGATCCAGGGACAAATCGTGGGCCAAGCAGACACGCCTTGTTTCCAGGACCTCAATAGCTCTACAGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS GCA 72 bp GCCTCGTCCCTCAGTGCCTGCAGGGCCTTCTTATTCTaGCGCCGCCTCTCCTCATCAATGGGGTACATTTTG +
Preference number: 6 (lower is better)
Translates to: ASSLSACRAFLF*RRLSSSMGYIL
Trigger: CAAAATGTACCCCATTGATGAGGAGAGGCGGCGGCAGAATAAGAAGGCCCTGCAGGCACTGAGGGACGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000480630.5
ENST00000483824.5
CDS GCA 72 bp GAGAGCTGTGGATGGACAAAGGGGGTTAAAGGGAGGTaGTTTAGAGCCACAGAGCCCCTCCTGCCCTTCCCA +
Preference number: 6 (lower is better)
Translates to: ESCGWTKGVKGR*FRATEPLLPFP
Trigger: TGGGAAGGGCAGGAGGGGCTCTGTGGCTCTAAAGCACCTCCCTTTAACCCCCTTTGTCCATCCACAGCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459917.1
CDS CCA 72 bp AAAAGGCCTCTTGCTCTAAGAGGAAGTAACCCTGCCTaGAGGTGCTCAGCGTGGCAAGTGGAGCCCAGGCCA +
Preference number: 6 (lower is better)
Translates to: KRPLALRGSNPA*RCSAWQVEPRP
Trigger: TGGCCTGGGCTCCACTTGCCACGCTGAGCACCTCCAGGCAGGGTTACTTCCTCTTAGAGCAAGAGGCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481612.1
CDS CCA 72 bp TGCCAAACCGGGTCAAGAACCACTGCCAGATGGGAATaGTTAAAGTGGCCGAGAGCTCTCTGCTCCCGCACG +
Preference number: 6 (lower is better)
Translates to: CQTGSRTTARWE*LKWPRALCSRT
Trigger: CGTGCGGGAGCAGAGAGCTCTCGGCCACTTTAACCATTCCCATCTGGCAGTGGTTCTTGACCCGGTTTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480630.5
CDS CAA 72 bp AGAGCTATTGAGGTCCTGGAAACAAGGCGTGTCTGCTaGGCCCACGATTTGTCCCTGGATCGCCGTGCCCAG +
Preference number: 6 (lower is better)
Translates to: RAIEVLETRRVC*AHDLSLDRRAQ
Trigger: CTGGGCACGGCGATCCAGGGACAAATCGTGGGCCAAGCAGACACGCCTTGTTTCCAGGACCTCAATAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS CAA 72 bp ATGGGAGCCATGGTCACGAGCATGTTCAGTGTAAACTaGACACGTTCCGGCTGCGAGCAGCCACGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: MGAMVTSMFSVN*TRSGCEQPRVW
Trigger: CCAGACCCGTGGCTGCTCGCAGCCGGAACGTGTCAAGTTTACACTGAACATGCTCGTGACCATGGCTCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000459917.1
ENST00000480630.5
ENST00000483824.5
ENST00000491515.5
CDS GCA 72 bp GGCACAGCCCGTCACCTGGTAGGGGGCTCCCCCAAGTaGATAGCAAAGCTTGTTGCAAACAGACAACTGTTG +
Preference number: 6 (lower is better)
Translates to: GTARHLVGGSPK*IAKLVANRQLL
Trigger: CAACAGTTGTCTGTTTGCAACAAGCTTTGCTATGCACTTGGGGGAGCCCCCTACCAGGTGACGGGCTGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000434861.5
ENST00000483824.5
CDS GCA 72 bp ACGAGCATGTTCAGTGTAAACTTGACACGTTCCGGCTaGGAGCAGCCACGGGTCTGGTACCCTGCAAAGTCC +
Preference number: 6 (lower is better)
Translates to: TSMFSVNLTRSG*EQPRVWYPAKS
Trigger: GGACTTTGCAGGGTACCAGACCCGTGGCTGCTCGCAGCCGGAACGTGTCAAGTTTACACTGAACATGCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000459917.1
ENST00000480630.5
ENST00000483824.5
ENST00000491515.5
CDS CCA 72 bp AACTTGACACGTTCCGGCTGCGAGCAGCCACGGGTCTaGTACCCTGCAAAGTCCAGACTGAGGGTAGAAATG +
Preference number: 6 (lower is better)
Translates to: NLTRSGCEQPRV*YPAKSRLRVEM
Trigger: CATTTCTACCCTCAGTCTGGACTTTGCAGGGTACCAGACCCGTGGCTGCTCGCAGCCGGAACGTGTCAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000459917.1
ENST00000480630.5
ENST00000483824.5
ENST00000491515.5
CDS CCA 72 bp TGGGAAGAGGCTGATGACCAAGCCCGGAATGGCAGATaGGAACTGGGACCCCAGACTGAAATCCTAGGCATG +
Preference number: 6 (lower is better)
Translates to: WEEADDQARNGR*ELGPQTEILGM
Trigger: CATGCCTAGGATTTCAGTCTGGGGTCCCAGTTCCCATCTGCCATTCCGGGCTTGGTCATCAGCCTCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480630.5
CDS CAA 90 bp ATGAGAACTATGGGAGCCATGGTCACGAGCATGTTCAGTGTAAACTaGACACGTTCCGGCTGCGAGCAGCCACGGGTCTGGTACCCTGCA +
Preference number: 6 (lower is better)
Translates to: MRTMGAMVTSMFSVN*TRSGCEQPRVWYPA
Trigger: TGCAGGGTACCAGACCCGTGGCTGCTCGCAGCCGGAACGTGTCAAGTTTACACTGAACATGCTCGTGACCATGGCTCCCATAGTTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000459917.1
ENST00000480630.5
ENST00000483824.5
ENST00000491515.5
CDS CAA 90 bp ACCAGCATGAAAGCCAAGGAGGTGAAGAGGAAGCCAGTAATAAGTTaGATGTATGGGCCGTGGCTCATGACCAGCCGTAGGCCCCGGAAG +
Preference number: 6 (lower is better)
Translates to: TSMKAKEVKRKPVIS*MYGPWLMTSRRPRK
Trigger: CTTCCGGGGCCTACGGCTGGTCATGAGCCACGGCCCATACATCAAACTTATTACTGGCTTCCTCTTCACCTCCTTGGCTTTCATGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000469745.5
ENST00000483824.5
ENST00000491515.5
CDS TCA 72 bp CATGGAAGTGGGGCTGCTTCAGATGGAAGTCGTCAATaGCATCAGGCAGCATGGACCATGATGGCCAGGAGT +
Preference number: 6 (lower is better)
Translates to: HGSGAASDGSRQ*HQAAWTMMARS
Trigger: ACTCCTGGCCATCATGGTCCATGCTGCCTGATGTCATTGACGACTTCCATCTGAAGCAGCCCCACTTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483824.5
CDS GCA 72 bp GAGAAGAAGATGGGCTCGGTTCCATGGAAGTGGGGCTaGTTCAGATGGAAGTCGTCAATGACATCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: EKKMGSVPWKWG*FRWKSSMTSGS
Trigger: GCTGCCTGATGTCATTGACGACTTCCATCTGAAGCAGCCCCACTTCCATGGAACCGAGCCCATCTTCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000459917.1
ENST00000480630.5
ENST00000481612.1
ENST00000483824.5
ENST00000491515.5
CDS CCA 72 bp GCAATAGAAAAGCAGGTACCAATAGGTCTGGCCGTGTaGGAAGTCGGGCACGAACCAGATGAGGAAGTAGGC +
Preference number: 6 (lower is better)
Translates to: AIEKQVPIGLAV*EVGHEPDEEVG
Trigger: GCCTACTTCCTCATCTGGTTCGTGCCCGACTTCCCACACGGCCAGACCTATTGGTACCTGCTTTTCTATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS CCA 72 bp TCTTCTTGCCAAACCGGGTCAAGAACCACTGCCAGATaGGAATGGTTAAAGTGGCCGAGAGCTCTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SSCQTGSRTTAR*EWLKWPRALCS
Trigger: GGAGCAGAGAGCTCTCGGCCACTTTAACCATTCCCATCTGGCAGTGGTTCTTGACCCGGTTTGGCAAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480630.5
CDS TCA 72 bp CATGGAAGTGGGGCTGCTTCAGATGGAAGTCGTCAATaGCATCAGGCAGCATGGACCAGGGTAGTAAGAAGG +
Preference number: 6 (lower is better)
Translates to: HGSGAASDGSRQ*HQAAWTRVVRR
Trigger: CCTTCTTACTACCCTGGTCCATGCTGCCTGATGTCATTGACGACTTCCATCTGAAGCAGCCCCACTTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000459917.1
ENST00000480630.5
ENST00000491515.5
CDS TCA 72 bp CAAGGCAGCACAGGCCATGGTAAAGAGAAAGGCCTTTaGGCCACTCTTCAGGGATTCCATTCTAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: QGSTGHGKEKGL*ATLQGFHSSST
Trigger: GGTGGAGCTAGAATGGAATCCCTGAAGAGTGGCTCAAAGGCCTTTCTCTTTACCATGGCCTGTGCTGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480630.5
CDS CCA 72 bp TCTTCTTGCCAAACCGGGTCAAGAACCACTGCCAGATaGGAATGGTTAAAGTGGCCGAGAGCTGTGGATGGA +
Preference number: 6 (lower is better)
Translates to: SSCQTGSRTTAR*EWLKWPRAVDG
Trigger: TCCATCCACAGCTCTCGGCCACTTTAACCATTCCCATCTGGCAGTGGTTCTTGACCCGGTTTGGCAAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459917.1
CDS CCA 72 bp CCAGCAGGTATGCCTTTTGCGTTTCCCTGTGTGAGGTaGTGCCATGTGTATGGTTGGCACTTTGTGAAGCTA +
Preference number: 6 (lower is better)
Translates to: PAGMPFAFPCVR*CHVYGWHFVKL
Trigger: TAGCTTCACAAAGTGCCAACCATACACATGGCACCACCTCACACAGGGAAACGCAAAAGGCATACCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS CAA 72 bp GTATGGTTGGCACTTTGTGAAGCTACTGTAGAGCTATaGAGGTCCTGGAAACAAGGCGTGTCTGCTTGGCCC +
Preference number: 6 (lower is better)
Translates to: VWLALCEATVEL*RSWKQGVSAWP
Trigger: GGGCCAAGCAGACACGCCTTGTTTCCAGGACCTCAATAGCTCTACAGTAGCTTCACAAAGTGCCAACCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS CAA 72 bp AAAGCCAAGGAGGTGAAGAGGAAGCCAGTAATAAGTTaGATGTATGGGCCGTGGCTCATGACCAGCCGTAGG +
Preference number: 6 (lower is better)
Translates to: KAKEVKRKPVIS*MYGPWLMTSRR
Trigger: CCTACGGCTGGTCATGAGCCACGGCCCATACATCAAACTTATTACTGGCTTCCTCTTCACCTCCTTGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000469745.5
ENST00000483824.5
ENST00000491515.5
CDS CAA 90 bp GGCTCCCCCAAGTGCATAGCAAAGCTTGTTGCAAACAGACAACTGTaGTTTCTTCTTTTTCGGTTCTTTCTTCACCTGGGCCGGGCGTTC +
Preference number: 6 (lower is better)
Translates to: GSPKCIAKLVANRQL*FLLFRFFLHLGRAF
Trigger: GAACGCCCGGCCCAGGTGAAGAAAGAACCGAAAAAGAAGAAACAACAGTTGTCTGTTTGCAACAAGCTTTGCTATGCACTTGGGGGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000483824.5
CDS CAA 90 bp GTGCCATGTGTATGGTTGGCACTTTGTGAAGCTACTGTAGAGCTATaGAGGTCCTGGAAACAAGGCGTGTCTGCTTGGCCCACGATTTGT +
Preference number: 6 (lower is better)
Translates to: VPCVWLALCEATVEL*RSWKQGVSAWPTIC
Trigger: ACAAATCGTGGGCCAAGCAGACACGCCTTGTTTCCAGGACCTCAATAGCTCTACAGTAGCTTCACAAAGTGCCAACCATACACATGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS GCA 72 bp TCTGTGTTAATGAGAAGAGGTGGCCCTCTGGAAGCTTaGAGTACCATGGGTACACAGCTCAGTGAGGATATG +
Preference number: 6 (lower is better)
Translates to: SVLMRRGGPLEA*STMGTQLSEDM
Trigger: CATATCCTCACTGAGCTGTGTACCCATGGTACTGCAAGCTTCCAGAGGGCCACCTCTTCTCATTAACACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481612.1
CDS CCA 72 bp GCACTTTGTGAAGCTACTGTAGAGCTATTGAGGTCCTaGAAACAAGGCGTGTCTGCTTGGCCCACGATTTGT +
Preference number: 6 (lower is better)
Translates to: ALCEATVELLRS*KQGVSAWPTIC
Trigger: ACAAATCGTGGGCCAAGCAGACACGCCTTGTTTCCAGGACCTCAATAGCTCTACAGTAGCTTCACAAAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS CAA 72 bp TGCGTTTCCCTGTGTGAGGTGGTGCCATGTGTATGGTaGGCACTTTGTGAAGCTACTGTAGAGCTATTGAGG +
Preference number: 6 (lower is better)
Translates to: CVSLCEVVPCVW*ALCEATVELLR
Trigger: CCTCAATAGCTCTACAGTAGCTTCACAAAGTGCCAACCATACACATGGCACCACCTCACACAGGGAAACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS CCA 72 bp TCAAAAGGGGTTAGACCTCAGGATGGACTAACTTCATaGCATCAGTATAGCAAGGCAGCACAGGCCATGGTA +
Preference number: 6 (lower is better)
Translates to: SKGVRPQDGLTS*HQYSKAAQAMV
Trigger: TACCATGGCCTGTGCTGCCTTGCTATACTGATGCCATGAAGTTAGTCCATCCTGAGGTCTAACCCCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480630.5
CDS CAA 90 bp TATGCCTTTTGCGTTTCCCTGTGTGAGGTGGTGCCATGTGTATGGTaGGCACTTTGTGAAGCTACTGTAGAGCTATTGAGGTCCTGGAAA +
Preference number: 6 (lower is better)
Translates to: YAFCVSLCEVVPCVW*ALCEATVELLRSWK
Trigger: TTTCCAGGACCTCAATAGCTCTACAGTAGCTTCACAAAGTGCCAACCATACACATGGCACCACCTCACACAGGGAAACGCAAAAGGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS CCA 72 bp TTTTGCGTTTCCCTGTGTGAGGTGGTGCCATGTGTATaGTTGGCACTTTGTGAAGCTACTGTAGAGCTATTG +
Preference number: 6 (lower is better)
Translates to: FCVSLCEVVPCV*LALCEATVELL
Trigger: CAATAGCTCTACAGTAGCTTCACAAAGTGCCAACCATACACATGGCACCACCTCACACAGGGAAACGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372809.5
ENST00000372811.10
ENST00000420632.6
ENST00000434861.5
ENST00000469745.5
ENST00000480630.5
ENST00000483824.5
CDS CCA 72 bp TGTTCCTTCTGGAGTTCAGTGTTCCCCCTCTGTAAATaGATACAACTAAGATGCGATGCTTGCCAAGTTAGA +
Preference number: 6 (lower is better)
Translates to: CSFWSSVFPLCK*IQLRCDACQVR
Trigger: TCTAACTTGGCAAGCATCGCATCTTAGTTGTATCCATTTACAGAGGGGGAACACTGAACTCCAGAAGGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469745.5