Pregenerated sensors for MFN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000171109Ensembl transcript IDs: ENST00000263969.9, ENST00000357390.8, ENST00000467174.6, ENST00000471841.6
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACATAAACTACATGTGGCCAAATGTACTGCGTTCCCCGGGATTGTaGATTTCTAACAAGTGTCTAGGAGATACTGATCTGGTAGTCCTA | + |
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Preference number: 1 (lower is better) Translates to: NINYMWPNVLRSPGL*ISNKCLGDTDLVVL Trigger: TAGGACTACCAGATCAGTATCTCCTAGACACTTGTTAGAAATGCACAATCCCGGGGAACGCAGTACATTTGGCCACATGTAGTTTATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| 3UTR CCA 90 bp | TCCACACTTTTTATAAGTTTGAAGGTTGATTATAGCTGTGTGTGGTaGCTTACACCTGTTATCCCAACAGTTTGGGAGGCTGAGGTAAAA | + |
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Preference number: 1 (lower is better) Translates to: STLFISLKVDYSCVW*LTPVIPTVWEAEVK Trigger: TTTTACCTCAGCCTCCCAAACTGTTGGGATAACAGGTGTAAGCCACCACACACAGCTATAATCAACCTTCAAACTTATAAAAAGTGTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| 3UTR CAA 90 bp | GGAAACATAAACTACATGTGGCCAAATGTACTGCGTTCCCCGGGATaGTGCATTTCTAACAAGTGTCTAGGAGATACTGATCTGGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: GNINYMWPNVLRSPG*CISNKCLGDTDLVV Trigger: GACTACCAGATCAGTATCTCCTAGACACTTGTTAGAAATGCACAATCCCGGGGAACGCAGTACATTTGGCCACATGTAGTTTATGTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| 3UTR-3UTR CCA 90 bp | GATGAAAAAGTTGCCATACCAAACCTAATACCAGTGGTACCCCAATTTCACTGTTGGCCTCTTCCACAGTaGGGAAGAAAGTCAACAGAA | + |
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Preference number: 2 (lower is better) Translates to: DEKVAIPNLIPVVPQFHCWPLPQ*GRKSTE Trigger: TTCTGTTGACTTTCTTCCCCACTGTGGAAGAGGCCA...ACAGTGAAATTGGGGTACCACTGGTATTAGGTTTGGTATGGCAACTTTTTCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| 3UTR-3UTR GCA 90 bp | GATGAAAAAGTTGCCATACCAAACCTAATACCAGTGGTACCCCAATTTCACTGTAGTGTTTCACATAGCTaGCATGATGGCAACGTGACT | + |
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Preference number: 2 (lower is better) Translates to: DEKVAIPNLIPVVPQFHCSVSHS*HDGNVT Trigger: AGTCACGTTGCCATCATGGCAGCTATGTGAAACACT...ACAGTGAAATTGGGGTACCACTGGTATTAGGTTTGGTATGGCAACTTTTTCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| 3UTR-3UTR TCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTAAAATACACATACCCTaGGACAGATCATTACCAGAA | + |
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Preference number: 2 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPKIHIP*DRSLPE Trigger: TTCTGGTAATGATCTGTCTCAGGGTATGTGTATTTT...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| 3UTR-3UTR TCA 90 bp | CAGTGGGGAAGAAAGTCAACAGAACCTCCACTAGGCATAATTTACATATGTACAAAAATACACATACCCTaGGACAGATCATTACCAGAA | + |
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Preference number: 2 (lower is better) Translates to: QWGRKSTEPPLGIIYICTKIHIP*DRSLPE Trigger: TTCTGGTAATGATCTGTCTCAGGGTATGTGTATTTT...TGTACATATGTAAATTATGCCTAGTGGAGGTTCTGTTGACTTTCTTCCCCACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| 3UTR-3UTR GCA 90 bp | GATGAAAAAGTTGCCATACCAAACCTAATACCAGTGGTACCCCAATTTCACTGTTTTGCATTAGTATACTaGACTCGTGTCAATTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: DEKVAIPNLIPVVPQFHCFALVY*TRVNLH Trigger: ATGCAAATTGACACGAGTGCAGTATACTAATGCAAA...ACAGTGAAATTGGGGTACCACTGGTATTAGGTTTGGTATGGCAACTTTTTCATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| 3UTR CCA 72 bp | ATGTGCAAATGGAGGCAAAACTGGCCTCTTCCACAGTaGGGAAGAAAGTCAACAGAACCTCCACTAGGCATA | + |
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Preference number: 3 (lower is better) Translates to: MCKWRQNWPLPQ*GRKSTEPPLGI Trigger: TATGCCTAGTGGAGGTTCTGTTGACTTTCTTCCCCACTGTGGAAGAGGCCAGTTTTGCCTCCATTTGCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| 3UTR GCA 72 bp | TACATGTGGCCAAATGTACTGCGTTCCCCGGGATTGTaGATTTCTAACAAGTGTCTAGGAGATACTGATCTG | + |
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Preference number: 3 (lower is better) Translates to: YMWPNVLRSPGL*ISNKCLGDTDL Trigger: CAGATCAGTATCTCCTAGACACTTGTTAGAAATGCACAATCCCGGGGAACGCAGTACATTTGGCCACATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| 3UTR-3UTR CAA 90 bp | GATGAAAAAGTTGCCATACCAAACCTAATACCAGTGGTACCCCAATTTCACTGTACCCAGGACCAAACTTaGAGAACCACTGTACTATAC | + |
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Preference number: 3 (lower is better) Translates to: DEKVAIPNLIPVVPQFHCTQDQT*RTTVLY Trigger: GTATAGTACAGTGGTTCTCAAAGTTTGGTCCTGGGT...ACAGTGAAATTGGGGTACCACTGGTATTAGGTTTGGTATGGCAACTTTTTCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR TCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTGGCTGCAGTGAGCCATaGTCACGCCACTGCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPGCSEP*SRHCTP Trigger: TGGAGTGCAGTGGCGTGATCATGGCTCACTGCAGCC...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR TCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTAGGTTGAGGCTGCAGTaGGCCATGATCACGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPRLRLQ*AMITPL Trigger: CAGTGGCGTGATCATGGCTCACTGCAGCCTCAACCT...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | CAGTGGGGAAGAAAGTCAACAGAACCTCCACTAGGCATAATTTACATATGTACACCCAGGAGGCTGATGTaGGAGGATCACCTGAACCCG | + |
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Preference number: 4 (lower is better) Translates to: QWGRKSTEPPLGIIYICTPRRLM*EDHLNP Trigger: CGGGTTCAGGTGATCCTCCCACATCAGCCTCCTGGG...TGTACATATGTAAATTATGCCTAGTGGAGGTTCTGTTGACTTTCTTCCCCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR TCA 90 bp | GAAATGAATGTGCAAATGGAGGCAAAACTGGCCTCTTCCACAGTGGGGAAGAAACTCAAACCTACTGTCTaGCTCCATAGGTCTGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: EMNVQMEAKLASSTVGKKLKPTV*LHRSGF Trigger: GAACCCAGACCTATGGAGTCAGACAGTAGGTTTGAG...TTTCTTCCCCACTGTGGAAGAGGCCAGTTTTGCCTCCATTTGCACATTCATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | GAAATGAATGTGCAAATGGAGGCAAAACTGGCCTCTTCCACAGTGGGGAAGAAAAAATGGAGGCAAAACTaGCCTCTTCCACAGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: EMNVQMEAKLASSTVGKKKWRQN*PLPQWG Trigger: TCCCCACTGTGGAAGAGGCCAGTTTTGCCTCCATTT...TTTCTTCCCCACTGTGGAAGAGGCCAGTTTTGCCTCCATTTGCACATTCATTTC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATTCTAGGCATAAGAGTTaGCTTTCGGCCGGGCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: ISVSHSCHDGNVTVTCINSRHKS*LSAGRG Trigger: ACCGCGCCCGGCCGAAAGCCAACTCTTATGCCTAGA...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTCAACTCGGCCACAGATaGCAAACTGCCTCATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPQLGHR*QTASSS Trigger: GGAAGATGAGGCAGTTTGGCATCTGTGGCCGAGTTG...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | GAAATGAATGTGCAAATGGAGGCAAAACTGGCCTCTTCCACAGTGGGGAAGAAATTGGTGACTGCAGTTTaGACTCGTGGAGCTAACAAT | + |
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Preference number: 4 (lower is better) Translates to: EMNVQMEAKLASSTVGKKLVTAV*TRGANN Trigger: ATTGTTAGCTCCACGAGTGCAAACTGCAGTCACCAA...TTTCTTCCCCACTGTGGAAGAGGCCAGTTTTGCCTCCATTTGCACATTCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTCCACAGATGCCAAACTaGCTCATCTTCCCGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPPQMPN*LIFPRS Trigger: ACTTCTCGGGAAGATGAGGCAGTTTGGCATCTGTGG...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATCAACTCGGCCACAGATaGCAAACTGCCTCATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: ISVSHSCHDGNVTVTCINQLGHR*QTASSS Trigger: GGAAGATGAGGCAGTTTGGCATCTGTGGCCGAGTTG...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATTGTGGCCAAATGTACTaGGTTCCCCGGGATTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: ISVSHSCHDGNVTVTCINCGQMY*VPRDCA Trigger: TGCACAATCCCGGGGAACGCAGTACATTTGGCCACA...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | GAAATGAATGTGCAAATGGAGGCAAAACTGGCCTCTTCCACAGTGGGGAAGAAACCAGATCATCTTCAGTaGCTATTCGATCAAGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: EMNVQMEAKLASSTVGKKPDHLQ*LFDQVP Trigger: CGGAACTTGATCGAATAGCCACTGAAGATGATCTGG...TTTCTTCCCCACTGTGGAAGAGGCCAGTTTTGCCTCCATTTGCACATTCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTTGCCACACCACTTTCTaGCATCCCCTGTGCTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPCHTTF*HPLCFL Trigger: CAAAAAGCACAGGGGATGCCAGAAAGTGGTGTGGCA...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | GAAATGAATGTGCAAATGGAGGCAAAACTGGCCTCTTCCACAGTGGGGAAGAAATTCCACACTCCTTGGTaGTTCCAGCAATGCGATTTA | + |
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Preference number: 4 (lower is better) Translates to: EMNVQMEAKLASSTVGKKFHTPW*FQQCDL Trigger: TAAATCGCATTGCTGGAACCACCAAGGAGTGTGGAA...TTTCTTCCCCACTGTGGAAGAGGCCAGTTTTGCCTCCATTTGCACATTCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| 3UTR CAA 72 bp | CCCAATTTCACTGTGCATCAGAAACACCTGGATGGCTaGTTAAACCATAGATTGCTGGGCCTCAAACCTACT | + |
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Preference number: 4 (lower is better) Translates to: PNFTVHQKHLDG*LNHRLLGLKPT Trigger: AGTAGGTTTGAGGCCCAGCAATCTATGGTTTAACAAGCCATCCAGGTGTTTCTGATGCACAGTGAAATTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | CAGTGGGGAAGAAAGTCAACAGAACCTCCACTAGGCATAATTTACATATGTACACCACAGATGCCAAACTaGCTCATCTTCCCGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QWGRKSTEPPLGIIYICTPQMPN*LIFPRS Trigger: ACTTCTCGGGAAGATGAGGCAGTTTGGCATCTGTGG...TGTACATATGTAAATTATGCCTAGTGGAGGTTCTGTTGACTTTCTTCCCCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | GATGAAAAAGTTGCCATACCAAACCTAATACCAGTGGTACCCCAATTTCACTGTAGTTCAAGACCAGCCTaGACAACATGGGGAAACCTC | + |
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Preference number: 4 (lower is better) Translates to: DEKVAIPNLIPVVPQFHCSSRPA*TTWGNL Trigger: GAGGTTTCCCCATGTTGTGCAGGCTGGTCTTGAACT...ACAGTGAAATTGGGGTACCACTGGTATTAGGTTTGGTATGGCAACTTTTTCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| 3UTR CAA 72 bp | AACTACATGTGGCCAAATGTACTGCGTTCCCCGGGATaGTGCATTTCTAACAAGTGTCTAGGAGATACTGAT | + |
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Preference number: 4 (lower is better) Translates to: NYMWPNVLRSPG*CISNKCLGDTD Trigger: ATCAGTATCTCCTAGACACTTGTTAGAAATGCACAATCCCGGGGAACGCAGTACATTTGGCCACATGTAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR TCA 90 bp | GAAATGAATGTGCAAATGGAGGCAAAACTGGCCTCTTCCACAGTGGGGAAGAAAATAGCACCTCACCAATaGTGGAAAGCTTGTCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: EMNVQMEAKLASSTVGKKIAPHQ*WKACLY Trigger: ATAAAGACAAGCTTTCCATCATTGGTGAGGTGCTAT...TTTCTTCCCCACTGTGGAAGAGGCCAGTTTTGCCTCCATTTGCACATTCATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTTGGAGAAACAGGTTCTaGCATTATGCTAAGTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPWRNRF*HYAKSP Trigger: CGGAGACTTAGCATAATGGCAGAACCTGTTTCTCCA...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTAGTGTTTCACATAGCTaGCATGATGGCAACGTGACT | + |
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Preference number: 4 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPSVSHS*HDGNVT Trigger: AGTCACGTTGCCATCATGGCAGCTATGTGAAACACT...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTCACAAAGTGCTTCAGTaGAGAAACAGGTTCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPHKVLQ*RNRFCH Trigger: ATGGCAGAACCTGTTTCTCCACTGAAGCACTTTGTG...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTTTCCACACTCCTTGGTaGTTCCAGCAATGCGATTTA | + |
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Preference number: 4 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPFHTPW*FQQCDL Trigger: TAAATCGCATTGCTGGAACCACCAAGGAGTGTGGAA...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATACATTCCACACTCCTTaGTGGTTCCAGCAATGCGAT | + |
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Preference number: 4 (lower is better) Translates to: ISVSHSCHDGNVTVTCINTFHTP*WFQQCD Trigger: ATCGCATTGCTGGAACCACCAAGGAGTGTGGAATGT...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | GATGAAAAAGTTGCCATACCAAACCTAATACCAGTGGTACCCCAATTTCACTGTACATTCCACACTCCTTaGTGGTTCCAGCAATGCGAT | + |
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Preference number: 4 (lower is better) Translates to: DEKVAIPNLIPVVPQFHCTFHTP*WFQQCD Trigger: ATCGCATTGCTGGAACCACCAAGGAGTGTGGAATGT...ACAGTGAAATTGGGGTACCACTGGTATTAGGTTTGGTATGGCAACTTTTTCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | CAGTGGGGAAGAAAGTCAACAGAACCTCCACTAGGCATAATTTACATATGTACATGGCCTCTTCCACAGTaGGGAAGAAAGTCAACAGAA | + |
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Preference number: 4 (lower is better) Translates to: QWGRKSTEPPLGIIYICTWPLPQ*GRKSTE Trigger: TTCTGTTGACTTTCTTCCCCACTGTGGAAGAGGCCA...TGTACATATGTAAATTATGCCTAGTGGAGGTTCTGTTGACTTTCTTCCCCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | GAAATGAATGTGCAAATGGAGGCAAAACTGGCCTCTTCCACAGTGGGGAAGAAAAACATAAACTACATGTaGCCAAATGTACTGCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: EMNVQMEAKLASSTVGKKNINYM*PNVLRS Trigger: GGAACGCAGTACATTTGGCCACATGTAGTTTATGTT...TTTCTTCCCCACTGTGGAAGAGGCCAGTTTTGCCTCCATTTGCACATTCATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATAAATCCTTCAGCAAGTaGCACACCACTTTCTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: ISVSHSCHDGNVTVTCINKSFSK*HTTFWH Trigger: ATGCCAGAAAGTGGTGTGGCACTTGCTGAAGGATTT...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | CAGTGGGGAAGAAAGTCAACAGAACCTCCACTAGGCATAATTTACATATGTACAAAATCCTTCAGCAAGTaGCACACCACTTTCTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: QWGRKSTEPPLGIIYICTKSFSK*HTTFWH Trigger: ATGCCAGAAAGTGGTGTGGCACTTGCTGAAGGATTT...TGTACATATGTAAATTATGCCTAGTGGAGGTTCTGTTGACTTTCTTCCCCACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATTTGGTGACTGCAGTTTaGACTCGTGGAGCTAACAAT | + |
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Preference number: 4 (lower is better) Translates to: ISVSHSCHDGNVTVTCINLVTAV*TRGANN Trigger: ATTGTTAGCTCCACGAGTGCAAACTGCAGTCACCAA...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTAATATCCTAGGCAAATaGCTCCTGAAGAACAACAGC | + |
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Preference number: 4 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPNILGK*LLKNNS Trigger: GCTGTTGTTCTTCAGGAGGCATTTGCCTAGGATATT...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | CAGTGGGGAAGAAAGTCAACAGAACCTCCACTAGGCATAATTTACATATGTACAACCCCAATTTCACTGTaGATCAGAAACACCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: QWGRKSTEPPLGIIYICTTPISL*IRNTWM Trigger: CATCCAGGTGTTTCTGATGCACAGTGAAATTGGGGT...TGTACATATGTAAATTATGCCTAGTGGAGGTTCTGTTGACTTTCTTCCCCACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATCACAAAGTGCTTCAGTaGAGAAACAGGTTCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ISVSHSCHDGNVTVTCINHKVLQ*RNRFCH Trigger: ATGGCAGAACCTGTTTCTCCACTGAAGCACTTTGTG...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATCCAGATCATCTTCAGTaGCTATTCGATCAAGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: ISVSHSCHDGNVTVTCINPDHLQ*LFDQVP Trigger: CGGAACTTGATCGAATAGCCACTGAAGATGATCTGG...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR TCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTATAGCACCTCACCAATaGTGGAAAGCTTGTCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPIAPHQ*WKACLY Trigger: ATAAAGACAAGCTTTCCATCATTGGTGAGGTGCTAT...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR TCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTAAGCATTTACAACTTTaGGCTCCTCCACCAAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPKHLQL*APPPRN Trigger: ATTTCTTGGTGGAGGAGCTCAAAGTTGTAAATGCTT...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR TCA 90 bp | GATGAAAAAGTTGCCATACCAAACCTAATACCAGTGGTACCCCAATTTCACTGTGTGTCTAGGAGATACTaGTCTGGTAGTCCTACATTT | + |
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Preference number: 4 (lower is better) Translates to: DEKVAIPNLIPVVPQFHCVSRRY*SGSPTF Trigger: AAATGTAGGACTACCAGATCAGTATCTCCTAGACAC...ACAGTGAAATTGGGGTACCACTGGTATTAGGTTTGGTATGGCAACTTTTTCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTTTTCCATGTGCTGTCTaGGTACGTCTTCCATATATT | + |
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Preference number: 4 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPFPCAV*VRLPYI Trigger: AATATATGGAAGACGTACGCAGACAGCACATGGAAA...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | GAAATGAATGTGCAAATGGAGGCAAAACTGGCCTCTTCCACAGTGGGGAAGAAAAACGTGACTGTGACTTaGATAAATAATACACTCAAG | + |
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Preference number: 4 (lower is better) Translates to: EMNVQMEAKLASSTVGKKNVTVT*INNTLK Trigger: CTTGAGTGTATTATTTATGCAAGTCACAGTCACGTT...TTTCTTCCCCACTGTGGAAGAGGCCAGTTTTGCCTCCATTTGCACATTCATTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATAATATCCTAGGCAAATaGCTCCTGAAGAACAACAGC | + |
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Preference number: 4 (lower is better) Translates to: ISVSHSCHDGNVTVTCINNILGK*LLKNNS Trigger: GCTGTTGTTCTTCAGGAGGCATTTGCCTAGGATATT...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | GAAATGAATGTGCAAATGGAGGCAAAACTGGCCTCTTCCACAGTGGGGAAGAAAGACGTCTCCTATCTTTaGCTATTTTTATCTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: EMNVQMEAKLASSTVGKKDVSYL*LFLSLQ Trigger: TTGAAGAGATAAAAATAGCCAAAGATAGGAGACGTC...TTTCTTCCCCACTGTGGAAGAGGCCAGTTTTGCCTCCATTTGCACATTCATTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | GAAATGAATGTGCAAATGGAGGCAAAACTGGCCTCTTCCACAGTGGGGAAGAAAATTAAAAGCCTCCAATaGGGTATAATCCAGCAATAT | + |
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Preference number: 4 (lower is better) Translates to: EMNVQMEAKLASSTVGKKIKSLQ*GIIQQY Trigger: ATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT...TTTCTTCCCCACTGTGGAAGAGGCCAGTTTTGCCTCCATTTGCACATTCATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR TCA 90 bp | GATGAAAAAGTTGCCATACCAAACCTAATACCAGTGGTACCCCAATTTCACTGTAAGCATTTACAACTTTaGGCTCCTCCACCAAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: DEKVAIPNLIPVVPQFHCKHLQL*APPPRN Trigger: ATTTCTTGGTGGAGGAGCTCAAAGTTGTAAATGCTT...ACAGTGAAATTGGGGTACCACTGGTATTAGGTTTGGTATGGCAACTTTTTCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR TCA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATAGCTGCCAGGTTTACTaGATCCATTATGTTTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: ISVSHSCHDGNVTVTCINSCQVY*IHYVFH Trigger: GTGAAAAACATAATGGATTCAGTAAACCTGGCAGCT...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR TCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTTCTTCCAGCTGTTTTTaGGTAATATCAACTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPSSSCF*VISTCW Trigger: CCAACAAGTTGATATTACTCAAAAACAGCTGGAAGA...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR TCA 90 bp | CAGTGGGGAAGAAAGTCAACAGAACCTCCACTAGGCATAATTTACATATGTACATCTTCCAGCTGTTTTTaGGTAATATCAACTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: QWGRKSTEPPLGIIYICTSSSCF*VISTCW Trigger: CCAACAAGTTGATATTACTCAAAAACAGCTGGAAGA...TGTACATATGTAAATTATGCCTAGTGGAGGTTCTGTTGACTTTCTTCCCCACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR TCA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATATCTGTCATTGCACATaGAACCTTTTATCTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: ISVSHSCHDGNVTVTCINICHCT*NLLSSA Trigger: AGCTGAAGATAAAAGGTTTCATGTGCAATGACAGAT...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357390.8 |
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| CDS-3UTR TCA 90 bp | GATGAAAAAGTTGCCATACCAAACCTAATACCAGTGGTACCCCAATTTCACTGTTCTTCTAAGATACCTTaGAAAATAGAGTTGCACCTG | + |
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Preference number: 4 (lower is better) Translates to: DEKVAIPNLIPVVPQFHCSSKIP*KIELHL Trigger: CAGGTGCAACTCTATTTTTCAAGGTATCTTAGAAGA...ACAGTGAAATTGGGGTACCACTGGTATTAGGTTTGGTATGGCAACTTTTTCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTAACGTGACTGTGACTTaGATAAATAATACACTCAAG | + |
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Preference number: 4 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPNVTVT*INNTLK Trigger: CTTGAGTGTATTATTTATGCAAGTCACAGTCACGTT...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATGAAAGCGTTCCTTATTaGAATCATAATGGGAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: ISVSHSCHDGNVTVTCINESVPY*NHNGSK Trigger: TTTGCTCCCATTATGATTCCAATAAGGAACGCTTTC...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | CAGTGGGGAAGAAAGTCAACAGAACCTCCACTAGGCATAATTTACATATGTACAGAAAGCGTTCCTTATTaGAATCATAATGGGAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: QWGRKSTEPPLGIIYICTESVPY*NHNGSK Trigger: TTTGCTCCCATTATGATTCCAATAAGGAACGCTTTC...TGTACATATGTAAATTATGCCTAGTGGAGGTTCTGTTGACTTTCTTCCCCACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR GCA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATTTTGCATTAGTATACTaGACTCGTGTCAATTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: ISVSHSCHDGNVTVTCINFALVY*TRVNLH Trigger: ATGCAAATTGACACGAGTGCAGTATACTAATGCAAA...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATGACGTCTCCTATCTTTaGCTATTTTTATCTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: ISVSHSCHDGNVTVTCINDVSYL*LFLSLQ Trigger: TTGAAGAGATAAAAATAGCCAAAGATAGGAGACGTC...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CCA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATATTAAAAGCCTCCAATaGGGTATAATCCAGCAATAT | + |
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Preference number: 4 (lower is better) Translates to: ISVSHSCHDGNVTVTCINIKSLQ*GIIQQY Trigger: ATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS GCA 90 bp | GTCTCCGCTCCAACTATCACCCGGCAACAGCAACTCGGCCACAGATaGCAAACTGCCTCATCTTCCCGAGAAGTTAAAGGCGGAGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: VSAPTITRQQQLGHR*QTASSSREVKGGEE Trigger: CTCCTCTCCGCCTTTAACTTCTCGGGAAGATGAGGCAGTTTGGCATCTGTGGCCGAGTTGCTGTTGCCGGGTGATAGTTGGAGCGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR CAA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTGACATTCCACACTCCTaGGTGGTTCCAGCAATGCGA | + |
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Preference number: 5 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPDIPHS*VVPAMR Trigger: TCGCATTGCTGGAACCACCAAGGAGTGTGGAATGTC...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CAA 90 bp | GAAATGAATGTGCAAATGGAGGCAAAACTGGCCTCTTCCACAGTGGGGAAGAAAATTGCACATGAAACTTaGTTTGCCACCTCCTCGGTA | + |
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Preference number: 5 (lower is better) Translates to: EMNVQMEAKLASSTVGKKIAHET*FATSSV Trigger: TACCGAGGAGGTGGCAAACAAAGTTTCATGTGCAAT...TTTCTTCCCCACTGTGGAAGAGGCCAGTTTTGCCTCCATTTGCACATTCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR CAA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATGACATTCCACACTCCTaGGTGGTTCCAGCAATGCGA | + |
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Preference number: 5 (lower is better) Translates to: ISVSHSCHDGNVTVTCINDIPHS*VVPAMR Trigger: TCGCATTGCTGGAACCACCAAGGAGTGTGGAATGTC...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CAA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATACCCAGGACCAAACTTaGAGAACCACTGTACTATAC | + |
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Preference number: 5 (lower is better) Translates to: ISVSHSCHDGNVTVTCINTQDQT*RTTVLY Trigger: GTATAGTACAGTGGTTCTCAAAGTTTGGTCCTGGGT...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR CAA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTCCGGATTCTTATATGTaGCTTCAACAAAATGTGATC | + |
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Preference number: 5 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPPDSYM*LQQNVI Trigger: GATCACATTTTGTTGAAGCAACATATAAGAATCCGG...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CAA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTCTTGTCTTTATATCCTaGCATTTCTACCAGATCATC | + |
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Preference number: 5 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPLVFIS*HFYQII Trigger: GATGATCTGGTAGAAATGCAAGGATATAAAGACAAG...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CAA 90 bp | ATTAAAAGCCTCCAATGGGGTATAATCCAGCAATATCCTAGGCAAATGCCTCCTCCAATGATGGAAAGCTaGTCTTTATATCCTTGCATT | + |
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Preference number: 5 (lower is better) Translates to: IKSLQWGIIQQYPRQMPPPMMES*SLYPCI Trigger: AATGCAAGGATATAAAGACAAGCTTTCCATCATTGG...AGGAGGCATTTGCCTAGGATATTGCTGGATTATACCCCATTGGAGGCTTTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CAA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATAAAGCATTTACAACTTaGAGCTCCTCCACCAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: ISVSHSCHDGNVTVTCINKAFTT*SSSTKK Trigger: TTTCTTGGTGGAGGAGCTCAAAGTTGTAAATGCTTT...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CAA 90 bp | CAGTGGGGAAGAAAGTCAACAGAACCTCCACTAGGCATAATTTACATATGTACAAAAGCATTTACAACTTaGAGCTCCTCCACCAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: QWGRKSTEPPLGIIYICTKAFTT*SSSTKK Trigger: TTTCTTGGTGGAGGAGCTCAAAGTTGTAAATGCTTT...TGTACATATGTAAATTATGCCTAGTGGAGGTTCTGTTGACTTTCTTCCCCACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS-3UTR CAA 90 bp | ATTAGTGTTTCACATAGCTGCCATGATGGCAACGTGACTGTGACTTGCATAAATCCGGATTCTTATATGTaGCTTCAACAAAATGTGATC | + |
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Preference number: 5 (lower is better) Translates to: ISVSHSCHDGNVTVTCINPDSYM*LQQNVI Trigger: GATCACATTTTGTTGAAGCAACATATAAGAATCCGG...ATTTATGCAAGTCACAGTCACGTTGCCATCATGGCAGCTATGTGAAACACTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357390.8 ENST00000471841.6 |
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| CDS-3UTR CAA 90 bp | GATGAAAAAGTTGCCATACCAAACCTAATACCAGTGGTACCCCAATTTCACTGTCTTGTCTTTATATCCTaGCATTTCTACCAGATCATC | + |
|
Preference number: 5 (lower is better) Translates to: DEKVAIPNLIPVVPQFHCLVFIS*HFYQII Trigger: GATGATCTGGTAGAAATGCAAGGATATAAAGACAAG...ACAGTGAAATTGGGGTACCACTGGTATTAGGTTTGGTATGGCAACTTTTTCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS GCA 72 bp | CCAACTATCACCCGGCAACAGCAACTCGGCCACAGATaGCAAACTGCCTCATCTTCCCGAGAAGTTAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PTITRQQQLGHR*QTASSSREVKG Trigger: GCCTTTAACTTCTCGGGAAGATGAGGCAGTTTGGCATCTGTGGCCGAGTTGCTGTTGCCGGGTGATAGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471841.6 |
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| CDS CAA 72 bp | CACCTCACCAATGATGGAAAGCTTGTCTTTATATCCTaGCATTTCTACCAGATCATCTTCAGTGGCTATTCG | + |
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Preference number: 6 (lower is better) Translates to: HLTNDGKLVFIS*HFYQIIFSGYS Trigger: CGAATAGCCACTGAAGATGATCTGGTAGAAATGCAAGGATATAAAGACAAGCTTTCCATCATTGGTGAGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000263969.9 ENST00000357390.8 ENST00000467174.6 ENST00000471841.6 |
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