RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MFHAS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000147324, ENSG00000285022

Ensembl transcript IDs: ENST00000276282.7, ENST00000520091.1, ENST00000520715.5, ENST00000521881.5, ENST00000644336.1, ENST00000644614.1

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCACCCTGCAAGCACGCGTTGTCACTCAAGTTCACAGAACACGCTaGGGTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGG +
Preference number: 1 (lower is better)
Translates to: STLQARVVTQVHRTR*GECRGSARCKRWSR
Trigger: CCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAACTTGAGTGACAACGCGTGCTTGCAGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR TCA 90 bp CCTGCAAGCACGCGTTGTCACTCAAGTTCACAGAACACGCTGGGGTaGGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTC +
Preference number: 1 (lower is better)
Translates to: PASTRCHSSSQNTLG*VQRVCQVQKMVQVF
Trigger: GAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAACTTGAGTGACAACGCGTGCTTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR GCA 90 bp CAAGCACGCGTTGTCACTCAAGTTCACAGAACACGCTGGGGTGAGTaGAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGAT +
Preference number: 1 (lower is better)
Translates to: QARVVTQVHRTRWGE*RGSARCKRWSRCSD
Trigger: ATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAACTTGAGTGACAACGCGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR CCA 90 bp TGGCCCCTGAGTGTGCCCCATCTCTGCCCAGCACTAATAACACGTTaGAAGAGCAAAGGATTTCCCACCAGCGTGCCAGATGATTTATAT +
Preference number: 1 (lower is better)
Translates to: WPLSVPHLCPALITR*KSKGFPTSVPDDLY
Trigger: ATATAAATCATCTGGCACGCTGGTGGGAAATCCTTTGCTCTTCCAACGTGTTATTAGTGCTGGGCAGAGATGGGGCACACTCAGGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR GCA 90 bp AACATTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTaGTGTGTCTTTCCAGGTGCTGAAAGAGAAAACGGAATTTCTTGC +
Preference number: 1 (lower is better)
Translates to: NIPLVLSESPIASVG*CVFPGAERENGISC
Trigger: GCAAGAAATTCCGTTTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR GCA 90 bp CCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTaGTTAGAAAACATTCCTCTTGTGCTTAGTGAATCACCTATCGCC +
Preference number: 1 (lower is better)
Translates to: PNKLGGHLFERQGTP*LENIPLVLSESPIA
Trigger: GGCGATAGGTGATTCACTAAGCACAAGAGGAATGTTTTCTAAGCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR TCA 90 bp TTCCCACCAGCGTGCCAGATGATTTATATAGGCAGGGACCTTCATTaGAAAGAAGGGAAGGGACACTGTCTTAAATGCACATTTAAGGTT +
Preference number: 1 (lower is better)
Translates to: FPPACQMIYIGRDLH*KEGKGHCLKCTFKV
Trigger: AACCTTAAATGTGCATTTAAGACAGTGTCCCTTCCCTTCTTTTCAATGAAGGTCCCTGCCTATATAAATCATCTGGCACGCTGGTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR GCA 90 bp GGCAGTGCTTTGACAATTCCAGGAAGTGGTTTTGATACCACAAGTTaGAGGAATAGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAG +
Preference number: 1 (lower is better)
Translates to: GSALTIPGSGFDTTS*RNRNPNKLGGHLFE
Trigger: CTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCTATTCCTGCAACTTGTGGTATCAAAACCACTTCCTGGAATTGTCAAAGCACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR GCA 90 bp AATAAGAAATCAGCCCCATCTTGGCACAGTTCTCATGCAGAATATTaGACCCAGTGTGAACTAACGCTAGAAGCTTCAAACTGTATAAAT +
Preference number: 1 (lower is better)
Translates to: NKKSAPSWHSSHAEY*TQCELTLEASNCIN
Trigger: ATTTATACAGTTTGAAGCTTCTAGCGTTAGTTCACACTGGGTGCAATATTCTGCATGAGAACTGTGCCAAGATGGGGCTGATTTCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR GCA 90 bp CCTCTTTCACATTTAACAGAACTGAAATCTGAGTGCTCTAAATACTaGCACCTGTACTGTAACTATGGCTTATATGTGCACGGAAAACAA +
Preference number: 1 (lower is better)
Translates to: PLSHLTELKSECSKY*HLYCNYGLYVHGKQ
Trigger: TTGTTTTCCGTGCACATATAAGCCATAGTTACAGTACAGGTGGCAGTATTTAGAGCACTCAGATTTCAGTTCTGTTAAATGTGAAAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR GCA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCATCGCCTCGGTGGGCTaGTGTGTCTTTCCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCIASVG*CVFPGA
Trigger: AGCACCTGGAAAGACACAGCAGCCCACCGAGGCGAT...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR TCA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACGTCCTCTTTGGCCCCTaGGTGTGCCCCATCTCTGCC +
Preference number: 2 (lower is better)
Translates to: SSCLRLARSSQFYTFSINVLFGP*VCPISA
Trigger: GGCAGAGATGGGGCACACTCAGGGGCCAAAGAGGAC...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR GCA 90 bp GTTGGAAGAGCAAAGGATTTCCCACCAGCGTGCCAGATGATTTATATAGGCAGGGTCCAAAAAGCACCCTaGAAGCACGCGTTGTCACTC +
Preference number: 2 (lower is better)
Translates to: VGRAKDFPPACQMIYIGRVQKAP*KHALSL
Trigger: GAGTGACAACGCGTGCTTGCAGGGTGCTTTTTGGAC...CCTGCCTATATAAATCATCTGGCACGCTGGTGGGAAATCCTTTGCTCTTCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR TCA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCCATCTTTTGGTCACATaGCCCTCGATCATGGTAACC +
Preference number: 2 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCHLLVT*PSIMVT
Trigger: GGTTACCATGATCGAGGGTCATGTGACCAAAAGATG...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR GCA 90 bp AATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAAGATTTCCCACCAGCGTaGCAGATGATTTATATAGGC +
Preference number: 2 (lower is better)
Translates to: NHLSPRWAAVSFQVLKEKDFPPA*QMIYIG
Trigger: GCCTATATAAATCATCTGGCACGCTGGTGGGAAATC...TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR CCA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCGGTATTACTAGTTCTTaGCAGGAGACCGTCCAATCA +
Preference number: 2 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFGITSS*QETVQS
Trigger: TGATTGGACGGTCTCCTGCCAAGAACTAGTAATACC...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR TCA 90 bp GTTGGAAGAGCAAAGGATTTCCCACCAGCGTGCCAGATGATTTATATAGGCAGGGTTATGGAACAGCAATaGACGTCAGTCGATCCCTCT +
Preference number: 2 (lower is better)
Translates to: VGRAKDFPPACQMIYIGRVMEQQ*TSVDPS
Trigger: AGAGGGATCGACTGACGTTCATTGCTGTTCCATAAC...CCTGCCTATATAAATCATCTGGCACGCTGGTGGGAAATCCTTTGCTCTTCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR TCA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCCACACACGAGAACTGTaGCAAAAGGATTCACCAGAT +
Preference number: 2 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCHTREL*QKDSPD
Trigger: ATCTGGTGAATCCTTTTGTCACAGTTCTCGTGTGTG...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR GCA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCTCTCATGCAGAATATTaGACCCAGTGTGAACTAACG +
Preference number: 2 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFSHAEY*TQCELT
Trigger: CGTTAGTTCACACTGGGTGCAATATTCTGCATGAGA...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR CCA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACGTTCACAGAACACGCTaGGGTGAGTGCAGAGGGTCT +
Preference number: 2 (lower is better)
Translates to: SSCLRLARSSQFYTFSINVHRTR*GECRGS
Trigger: AGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAAC...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR TCA 90 bp GTTGGAAGAGCAAAGGATTTCCCACCAGCGTGCCAGATGATTTATATAGGCAGGGGAGGATCACAGTTCTaGGGTTCAGGTTGTAAAACA +
Preference number: 2 (lower is better)
Translates to: VGRAKDFPPACQMIYIGRGGSQF*GSGCKT
Trigger: TGTTTTACAACCTGAACCTCAGAACTGTGATCCTCC...CCTGCCTATATAAATCATCTGGCACGCTGGTGGGAAATCCTTTGCTCTTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR TCA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCGGAAAACAAAATCCCTaGGAAGCCATTCGACTTTTT +
Preference number: 2 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFGKQNP*EAIRLF
Trigger: AAAAAGTCGAATGGCTTCTCAGGGATTTTGTTTTCC...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR TCA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCTGTCTTTCCAGGTGCTaGAAGAGAAAACGGAATTTC +
Preference number: 2 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCCLSRC*KRKRNF
Trigger: GAAATTCCGTTTTCTCTTTCAGCACCTGGAAAGACA...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR GCA 90 bp GTTGGAAGAGCAAAGGATTTCCCACCAGCGTGCCAGATGATTTATATAGGCAGGGTCCAGGTGTTCAGATaGTCTCTTTTCTCCATGGAA +
Preference number: 2 (lower is better)
Translates to: VGRAKDFPPACQMIYIGRVQVFR*SLFSME
Trigger: TTCCATGGAGAAAAGAGAGCATCTGAACACCTGGAC...CCTGCCTATATAAATCATCTGGCACGCTGGTGGGAAATCCTTTGCTCTTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR CCA 90 bp CACTCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCGCCAGGTGCAAAAGATaGTCCAGGTGTTCAGATGCT +
Preference number: 2 (lower is better)
Translates to: HSSCLRLARSSQFYTFSIARCKR*SRCSDA
Trigger: AGCATCTGAACACCTGGACCATCTTTTGCACCTGGC...GATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR TCA 90 bp GGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTCCTCTGACACTGCTTACAAAAATCGGTTTGTaGTTTCTAGCAGGGCAGTCG +
Preference number: 2 (lower is better)
Translates to: GNPFAKTHVTPRFPLTLLTKIGL*FLAGQS
Trigger: CGACTGCCCTGCTAGAAATCACAAACCGATTTTTGT...AAGCAGTGTCAGAGGAAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR CAA 90 bp ACCACAAGTTGCAGGAATAGAAACCCTAACAAACTTGGAGGGCATTaGTTTGAGAGGCAAGGGACGCCTTGCTTAGAAAACATTCCTCTT +
Preference number: 2 (lower is better)
Translates to: TTSCRNRNPNKLGGH*FERQGTPCLENIPL
Trigger: AAGAGGAATGTTTTCTAAGCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCTATTCCTGCAACTTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR TCA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTATATTGCACCCAGTGTaGACTAACGCTAGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCILHPV*TNARSF
Trigger: GAAGCTTCTAGCGTTAGTTCACACTGGGTGCAATAT...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR CCA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCCCAACACTTAATCCATaGGCTAACAGAGAGATTTTT +
Preference number: 2 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCPTLNP*ANREIF
Trigger: AAAAATCTCTCTGTTAGCCCATGGATTAAGTGTTGG...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR GCA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTGAGTGCTCTAAATACTaGCACCTGTACTGTAACTAT +
Preference number: 2 (lower is better)
Translates to: YCSICCLAQLKVEWRAICECSKY*HLYCNY
Trigger: ATAGTTACAGTACAGGTGGCAGTATTTAGAGCACTC...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR GCA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTACTATGGCTTATATGTaGACGGAAAACAAAATCCCT +
Preference number: 2 (lower is better)
Translates to: YCSICCLAQLKVEWRAICTMAYM*TENKIP
Trigger: AGGGATTTTGTTTTCCGTGCACATATAAGCCATAGT...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR GCA 72 bp GTTGTCACTCAAGTTCACAGAACACGCTGGGGTGAGTaGAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: VVTQVHRTRWGE*RGSARCKRWSR
Trigger: CCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAACTTGAGTGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR GCA 72 bp CTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTaGTGTGTCTTTCCAGGTGCTGAAAGAGAAAACGGA +
Preference number: 3 (lower is better)
Translates to: LVLSESPIASVG*CVFPGAERENG
Trigger: TCCGTTTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR CCA 72 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTaGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAA +
Preference number: 3 (lower is better)
Translates to: FLLCLVNHLSPR*AAVSFQVLKEK
Trigger: TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR CAA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTCAAGTAGCGCGCTCCTaGGAGGATCACAGTTCTGAG +
Preference number: 3 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCQVARS*EDHSSE
Trigger: CTCAGAACTGTGATCCTCCAAGGAGCGCGCTACTTG...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR CAA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCAGCACTAATAACACGTaGGAAGAGCAAAGGATTTCC +
Preference number: 3 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFSTNNT*EEQRIS
Trigger: GGAAATCCTTTGCTCTTCCAACGTGTTATTAGTGCT...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR GCA 72 bp TCAGCCCCATCTTGGCACAGTTCTCATGCAGAATATTaGACCCAGTGTGAACTAACGCTAGAAGCTTCAAAC +
Preference number: 3 (lower is better)
Translates to: SAPSWHSSHAEY*TQCELTLEASN
Trigger: GTTTGAAGCTTCTAGCGTTAGTTCACACTGGGTGCAATATTCTGCATGAGAACTGTGCCAAGATGGGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR CAA 90 bp AATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAAAAACATGTTGAGACTTaGTATACTGTAGCCTTCCAA +
Preference number: 3 (lower is better)
Translates to: NHLSPRWAAVSFQVLKEKKHVET*YTVAFQ
Trigger: TTGGAAGGCTACAGTATACAAAGTCTCAACATGTTT...TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR TCA 72 bp TCTTCAAGTAGCGCGCTCCTTGGAGGATCACAGTTCTaGGGTTCAGGTTGTAAAACATTTGCTCCATGTTCT +
Preference number: 3 (lower is better)
Translates to: SSSSALLGGSQF*GSGCKTFAPCS
Trigger: AGAACATGGAGCAAATGTTTTACAACCTGAACCTCAGAACTGTGATCCTCCAAGGAGCGCGCTACTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR TCA 72 bp AAGAGTAGCGAGTACCAGCAACTCACTCTTCTTGTCTaGGGCTGGCGAGAAGCAGTCAGTTTTATACATTTT +
Preference number: 3 (lower is better)
Translates to: KSSEYQQLTLLV*GWREAVSFIHF
Trigger: AAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTGAGTTGCTGGTACTCGCTACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR GCA 72 bp AAAGCAATTAAATGTGACCATTCAGTTTTACACACATaGACACACACACACACGGAGACGCGCACACACACA +
Preference number: 3 (lower is better)
Translates to: KAIKCDHSVLHT*THTHTETRTHT
Trigger: TGTGTGTGTGCGCGTCTCCGTGTGTGTGTGTGTGCATGTGTGTAAAACTGAATGGTCACATTTAATTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR CAA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTCAGGTTGTAAAACATTaGCTCCATGTTCTCGTCCAT +
Preference number: 3 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCQVVKH*LHVLVH
Trigger: ATGGACGAGAACATGGAGCAAATGTTTTACAACCTG...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR CAA 90 bp GGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTCCTCTGACACTGCTTTGTAGCATATGCTGTTaGGCCCAATTAAAAGTAGAA +
Preference number: 3 (lower is better)
Translates to: GNPFAKTHVTPRFPLTLLCSICC*AQLKVE
Trigger: TTCTACTTTTAATTGGGCCAAACAGCATATGCTACA...AAGCAGTGTCAGAGGAAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR-3UTR CAA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTAGAATGGAGAGCAATTaGTTTGGTTGGCTTTTTAAG +
Preference number: 3 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCRMESN*FGWLFK
Trigger: CTTAAAAAGCCAACCAAACAAATTGCTCTCCATTCT...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR GCA 72 bp CATTTAACAGAACTGAAATCTGAGTGCTCTAAATACTaGCACCTGTACTGTAACTATGGCTTATATGTGCAC +
Preference number: 3 (lower is better)
Translates to: HLTELKSECSKY*HLYCNYGLYVH
Trigger: GTGCACATATAAGCCATAGTTACAGTACAGGTGGCAGTATTTAGAGCACTCAGATTTCAGTTCTGTTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR TCA 72 bp ACATATACATATTTTACACTAGTTATGGAACAGCAATaGACGTCAGTCGATCCCTCTTTCACATTTAACAGA +
Preference number: 3 (lower is better)
Translates to: TYTYFTLVMEQQ*TSVDPSFTFNR
Trigger: TCTGTTAAATGTGAAAGAGGGATCGACTGACGTTCATTGCTGTTCCATAACTAGTGTAAAATATGTATATGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TTGTCACTCAAGTTCACAGAACACGCTGGGGTGAGTGCAGAGGGTCTGCCAGGTGCCGCGGAGGATGCCTaGTCCTCCTCCCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: LSLKFTEHAGVSAEGLPGAAEDA*SSSLSA
Trigger: GGCGGAGAGGGAGGAGGAGCAGGCATCCTCCGCGGC...ACCTGGCAGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAACTTGAGTGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TTGTCACTCAAGTTCACAGAACACGCTGGGGTGAGTGCAGAGGGTCTGCCAGGTGCGCGCCGCGGAGGATaGCTGCTCCTCCTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LSLKFTEHAGVSAEGLPGARRGG*LLLLPL
Trigger: GAGAGGGAGGAGGAGCAGGCATCCTCCGCGGCGCGC...ACCTGGCAGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAACTTGAGTGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp TTGTCACTCAAGTTCACAGAACACGCTGGGGTGAGTGCAGAGGGTCTGCCAGGTAGCTCGGTGAGGTGGTaGCCGAGCTCGGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: LSLKFTEHAGVSAEGLPGSSVRW*PSSATA
Trigger: GGCGGTGGCCGAGCTCGGCCACCACCTCACCGAGCT...ACCTGGCAGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAACTTGAGTGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCGGGCACGCAGGGCACTaGTATCCTCAGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLGHAGH*YPQAGP
Trigger: GGGGCCTGCCTGAGGATATCAGTGCCCTGCGTGCCC...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCAGCTTGCATTCTCCCTaGGGCCGGGCCATGGGCGCG +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLSLHSP*GRAMGA
Trigger: CGCGCCCATGGCCCGGCCGCAGGGAGAATGCAAGCT...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TTGTCACTCAAGTTCACAGAACACGCTGGGGTGAGTGCAGAGGGTCTGCCAGGTGGGCGAAGCGGTTCCTaGGCAGGACCAGGACGCGCA +
Preference number: 4 (lower is better)
Translates to: LSLKFTEHAGVSAEGLPGGRSGS*AGPGRA
Trigger: TGCGCGTCCTGGTCCTGCGCAGGAACCGCTTCGCCC...ACCTGGCAGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAACTTGAGTGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCAGGCTGCGTGGGGGCTaGCAGAGCGCAGCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLRLRGG*QSAARS
Trigger: ACTTCGAGCTGCGCTCTGCCAGCCCCCACGCAGCCT...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCGGGTGGACCGCGCCATaGGCGGGGAGCTTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFGWTAP*AGSFPP
Trigger: AGGGGGAAAGCTCCCCGCCCATGGCGCGGTCCACCC...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCTCTTTTCTCCATGGTTCCTGGCTGGGGGTaGACCGCGCCATGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VCQVQKMVQVFRCSLFSMVPGWG*TAPWAG
Trigger: CCCCGCCCATGGCGCGGTCCACCCCCAGCCAGGAAC...CATGGAGAAAAGAGAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCGCAGTGAGCTGGTTGTaGTCCACGTCCAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLAVSWL*STSRVR
Trigger: GCGCACCCTGGACGTGGATCACAACCAGCTCACTGC...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCTCTTTTCTCCATGAGCCGGCGGGCAGCGTaGCAAGCTCGGCCCCACTCA +
Preference number: 4 (lower is better)
Translates to: VCQVQKMVQVFRCSLFSMSRRAA*QARPHS
Trigger: TGAGTGGGGCCGAGCTTGGCACGCTGCCCGCCGGCT...CATGGAGAAAAGAGAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCGTGGGTGCCCACGATaGACACCACCGCGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFRGCPR*TPPRGA
Trigger: TGCCCCACGCGGTGGTGTGCATCGTGGGCACCCACG...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TTGTCACTCAAGTTCACAGAACACGCTGGGGTGAGTGCAGAGGGTCTGCCAGGTACGGGGGAGAGGATCTaGAGCCGGTGGTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSLKFTEHAGVSAEGLPGTGERI*SRWLSR
Trigger: CCTGCTCAACCACCGGCTGCAGATCCTCTCCCCCGT...ACCTGGCAGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAACTTGAGTGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCACCGCGTCCCCGGCGCTaGGAGGGCGCGATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPPRPRR*EGAIGK
Trigger: CTTCCCAATCGCGCCCTCCCAGCGCCGGGGACGCGG...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp AATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAATCCAGCTCGGTGAGGTaGTGGCCGAGCTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: NHLSPRWAAVSFQVLKEKSSSVR*WPSSAT
Trigger: GGTGGCCGAGCTCGGCCACCACCTCACCGAGCTGGA...TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCGAGAGCTGGCCAAAGTaGTCGGGCAGCACCGCGATC +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLESWPK*SGSTAI
Trigger: GATCGCGGTGCTGCCCGACCACTTTGGCCAGCTCTC...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCCATCGGCCGTCCAGCTaGTCACCTCGATGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLHRPSS*SPRCPC
Trigger: GCAAGGGCATCGAGGTGACCAGCTGGACGGCCGATG...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCATGCACACCACCGCGTaGGGCACTCTCGCCCCGACC +
Preference number: 4 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFMHTTA*GTLAPT
Trigger: GGTCGGGGCGAGAGTGCCCCACGCGGTGGTGTGCAT...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCATCGGTCAGACCCGCCTaGAGGCCCAAGCGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPSVRPA*RPKRAE
Trigger: CTCGGCGCGCTTGGGCCTGCAGGCGGGTCTGACCGA...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCATGCTCCGCAGCTTCCTaGCACGCAGGGCGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPCSAAS*HAGRRP
Trigger: GGGACGCCGCCCTGCGTGCCAGGAAGCTGCGGAGCA...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCAATGGACAGGGTGTCTaGCTGCAGGACTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLNGQGV*LQDSPG
Trigger: GCCAGGGGAGTCCTGCAGCCAGACACCCTGTCCATT...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCAAGCCCTCCACATACTaGTGGAGCTGGGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFKPSTY*WSWVAR
Trigger: CCGGGCCACCCAGCTCCATCAGTATGTGGAGGGCTT...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCGGCAGCACCGCGATCTaGTTCCCCTGCAGCACGAGC +
Preference number: 4 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCGSTAI*FPCSTS
Trigger: GCTCGTGCTGCAGGGGAACCAGATCGCGGTGCTGCC...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCACCCACCCGGGAGAGCTaGCCAAAGTGGTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPPTRES*PKWSGS
Trigger: GCTGCCCGACCACTTTGGCCAGCTCTCCCGGGTGGG...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCAGGAGCAGTTCCTGGCTaGGGGTGGACCGCGCCATGG +
Preference number: 4 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPGAVPG*GWTAPW
Trigger: CCATGGCGCGGTCCACCCCCAGCCAGGAACTGCTCC...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTCCATCAGGAGCAGCTTaGGCCGGGGCTGCACCGCCG +
Preference number: 4 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCPSGAA*AGAAPP
Trigger: CGGCGGTGCAGCCCCGGCTCAAGCTGCTCCTGATGG...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCAGCAACCGAATGACATaGGCTGGCAAGAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLSNRMT*AGKSPC
Trigger: GCATGGGCTCTTGCCAGCTCATGTCATTCGGTTGCT...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp TTGTCACTCAAGTTCACAGAACACGCTGGGGTGAGTGCAGAGGGTCTGCCAGGTCGTTCTTGGGGCAAATaGTCTCTGCCACTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: LSLKFTEHAGVSAEGLPGRSWGK*SLPLLP
Trigger: CGGAAGGAGTGGCAGAGATCATTTGCCCCAAGAACG...ACCTGGCAGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAACTTGAGTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCTGGAGGGCATTTGTTTaGGAGGCAAGGGACGCCTTG +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLWRAFV*EARDAL
Trigger: CAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCA...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTCCTCTGACACTGCTTGATCCACGTCCAGGGTaGGCAGGCGGGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GNPFAKTHVTPRFPLTLLDPRPG*AGGRGR
Trigger: CCTGCCTCTCCCGCCTGCGCACCCTGGACGTGGATC...AAGCAGTGTCAGAGGAAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GTTGGAAGAGCAAAGGATTTCCCACCAGCGTGCCAGATGATTTATATAGGCAGGCTCGCCCCGACCCGATaGAAGAAGGAGCCCACGGTG +
Preference number: 4 (lower is better)
Translates to: VGRAKDFPPACQMIYIGRLAPTR*KKEPTV
Trigger: CACCGTGGGCTCCTTCTTGCATCGGGTCGGGGCGAG...CCTGCCTATATAAATCATCTGGCACGCTGGTGGGAAATCCTTTGCTCTTCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCAGTTCCTCCAGCACCTaGCAGGATCGAGGCAGTACT +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLSSSST*QDRGST
Trigger: AGTACTGCCTCGATCCTGGCAGGTGCTGGAGGAACT...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCAGGTTGTGGAAGACGTaGTCCTTGAGAGCCGGACTG +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLRLWKT*SLRAGL
Trigger: CAGTCCGGCTCTCAAGGAGCACGTCTTCCACAACCT...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCCCTTGCCCTCTCCACTaGTCCCTAGGAGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLPCPLH*SLGAAY
Trigger: ATAAGCTGCTCCTAGGGACCAGTGGAGAGGGCAAGG...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCATCCAGGCTTCTGCATaGGGCACCTCGTTCTGCACA +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLIQASA*GTSFCT
Trigger: TGTGCAGAACGAGGTGCCCCATGCAGAAGCCTGGAT...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTTCACGTCCAGCTCGGTaGGGTGGTGGCCGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCSRPAR*GGGRAR
Trigger: CCGAGCTCGGCCACCACCTCACCGAGCTGGACGTGA...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCTGCTGGGCCTGGACATaGGGCTTAAGCAGCAACCGA +
Preference number: 4 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFCWAWT*GLSSNR
Trigger: TCGGTTGCTGCTTAAGCCTCATGTCCAGGCCCAGCA...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCACCTTCCGGTCTGGGCTaGCTCAGCAACTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPPSGLG*LSNSPG
Trigger: TCCAGGGGAGTTGCTGAGTCAGCCCAGACCGGAAGG...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp GTTGGAAGAGCAAAGGATTTCCCACCAGCGTGCCAGATGATTTATATAGGCAGGGTCCTCTTTGGCCCCTaGGTGTGCCCCATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VGRAKDFPPACQMIYIGRVLFGP*VCPISA
Trigger: GGCAGAGATGGGGCACACTCAGGGGCCAAAGAGGAC...CCTGCCTATATAAATCATCTGGCACGCTGGTGGGAAATCCTTTGCTCTTCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCTCTTTTCTCCATGAGGGAGTCAGGCAGGTaGGCCAGCCGGTTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: VCQVQKMVQVFRCSLFSMRESGR*ASRLKL
Trigger: CAGCTTTAACCGGCTGGCGCACCTGCCTGACTCCCT...CATGGAGAAAAGAGAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCTCTTTTCTCCATGTCACCTCGATGCCCTTaGTCACAGGGGGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: VCQVQKMVQVFRCSLFSMSPRCP*SQGEVT
Trigger: CGTCACCTCCCCCTGTGAGCAAGGGCATCGAGGTGA...CATGGAGAAAAGAGAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTCCTCTGACACTGCTTCAATGTCCCCGAGGTTaGCCGGCAGCACGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GNPFAKTHVTPRFPLTLLQCPRG*PAARAG
Trigger: CCCAGCTCGTGCTGCCGGCCAACCTCGGGGACATTG...AAGCAGTGTCAGAGGAAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GTTGGAAGAGCAAAGGATTTCCCACCAGCGTGCCAGATGATTTATATAGGCAGGCGAAGGCGTCGTAAGTaGCGCGGGTCCCTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: VGRAKDFPPACQMIYIGRRRRRK*RGSLQL
Trigger: TAGCTGCAGGGACCCGCGCCACTTACGACGCCTTCG...CCTGCCTATATAAATCATCTGGCACGCTGGTGGGAAATCCTTTGCTCTTCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp TTGTCACTCAAGTTCACAGAACACGCTGGGGTGAGTGCAGAGGGTCTGCCAGGTGACCTGTGCACCACATaGCTGTTGATCTGGACACTG +
Preference number: 4 (lower is better)
Translates to: LSLKFTEHAGVSAEGLPGDLCTT*LLIWTL
Trigger: CAGTGTCCAGATCAACAGCCATGTGGTGCACAGGTC...ACCTGGCAGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAACTTGAGTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCTCTTTTCTCCATGCCACTCCTTCCGGTCTaGGCTGACTCAGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: VCQVQKMVQVFRCSLFSMPLLPV*ADSATP
Trigger: GGGAGTTGCTGAGTCAGCCCAGACCGGAAGGAGTGG...CATGGAGAAAAGAGAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR CAA 72 bp GAGTGTGCCCCATCTCTGCCCAGCACTAATAACACGTaGGAAGAGCAAAGGATTTCCCACCAGCGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: ECAPSLPSTNNT*EEQRISHQRAR
Trigger: TCTGGCACGCTGGTGGGAAATCCTTTGCTCTTCCAACGTGTTATTAGTGCTGGGCAGAGATGGGGCACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp GGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTCCTCTGACACTGCTTGCTCACAGGGGGAGGTaGCGGTGGGTAGCACTTCTC +
Preference number: 4 (lower is better)
Translates to: GNPFAKTHVTPRFPLTLLAHRGR*RWVALL
Trigger: GAGAAGTGCTACCCACCGTCACCTCCCCCTGTGAGC...AAGCAGTGTCAGAGGAAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp AATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAATCGGTGCTCAGCAACTaGCAGCAACTTGTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: NHLSPRWAAVSFQVLKEKSVLSN*QQLVPK
Trigger: CTTCGGGACAAGTTGCTGTCAGTTGCTGAGCACCGA...TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCCAGCAAAGTCTTTCCTaGAGCCTTATGCCCCATCAG +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLQQSLS*SLMPHQ
Trigger: CTGATGGGGCATAAGGCTGCAGGAAAGACTTTGCTG...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTCCTCTGACACTGCTTAGTCCCTCCGCGTCGTaGTTCTCCTGCAGGGCGATC +
Preference number: 4 (lower is better)
Translates to: GNPFAKTHVTPRFPLTLLSPSAS*FSCRAI
Trigger: GATCGCCCTGCAGGAGAAGCACGACGCGGAGGGACT...AAGCAGTGTCAGAGGAAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp CACTCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCGAAGTCCCGGGCCAGTaGCTCGTCCACCACCTTGGC +
Preference number: 4 (lower is better)
Translates to: HSSCLRLARSSQFYTFSIEVPGQ*LVHHLG
Trigger: GCCAAGGTGGTGGACGAGGCACTGGCCCGGGACTTC...GATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp AATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAAGCTGGCAAGAGCCCATaGAACAGAAAGCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: NHLSPRWAAVSFQVLKEKAGKSP*NRKPST
Trigger: TGTGGAGGGCTTTCTGTTGCATGGGCTCTTGCCAGC...TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTCCTCTGACACTGCTTGGGACGCCGAGCGCGTaGAGAGCAGCTTGCATTCTC +
Preference number: 4 (lower is better)
Translates to: GNPFAKTHVTPRFPLTLLGTPSA*RAACIL
Trigger: GAGAATGCAAGCTGCTCTCCACGCGCTCGGCGTCCC...AAGCAGTGTCAGAGGAAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTGCGGTAAGCGTGAGCTaGCGCAGGTTGCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCAVSVS*RRLLRS
Trigger: GCTGCGGAGCAACCTGCGCCAGCTCACGCTTACCGC...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCTCCTCGGTGAGGCAGTaGCGCAGCAAAGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFSSVRQ*RSKVFP
Trigger: AGGAAAGACTTTGCTGCGCCACTGCCTCACCGAGGA...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCACTCAGCAACTCCCCTaGAAAAGCATGTGGATTGGG +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLTQQLP*KSMWIG
Trigger: CCCAATCCACATGCTTTTCCAGGGGAGTTGCTGAGT...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCCACCTATCGCCTCGGTaGGCTGCTGTGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCHLSPR*AAVSFQ
Trigger: CTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTG...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp CACTCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCCCACTCTCTCCTCGGTaGGGCAGTGGCGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: HSSCLRLARSSQFYTFSIPLSPR*GSGAAK
Trigger: CTTTGCTGCGCCACTGCCTCACCGAGGAGAGAGTGG...GATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp TTGTCACTCAAGTTCACAGAACACGCTGGGGTGAGTGCAGAGGGTCTGCCAGGTCATCTTTTGGTCACATaGCCCTCGATCATGGTAACC +
Preference number: 4 (lower is better)
Translates to: LSLKFTEHAGVSAEGLPGHLLVT*PSIMVT
Trigger: GGTTACCATGATCGAGGGTCATGTGACCAAAAGATG...ACCTGGCAGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAACTTGAGTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp AATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAATTCCTTCTGGTAGGCTaGGATGTAGGGGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: NHLSPRWAAVSFQVLKEKFLLVG*DVGDPL
Trigger: AAGGGGATCCCCTACATCGCAGCCTACCAGAAGGAA...TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTACAGGTCTGCGTGGGTaGCCACGATGCACACCACCG +
Preference number: 4 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCTGLRG*PRCTPP
Trigger: CGGTGGTGTGCATCGTGGGCACCCACGCAGACCTGT...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTAACGCCATAGTAGGCTaGGTGGGGGCTGGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCNAIVG*VGAGRA
Trigger: CGCTCTGCCAGCCCCCACGCAGCCTACTATGGCGTT...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCAATCGCCTCGGTGGGCTaGTGTGTCTTTCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPIASVG*CVFPGA
Trigger: AGCACCTGGAAAGACACAGCAGCCCACCGAGGCGAT...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACTGCAGGCAGCTGAACTaGGCGGGCAGAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSCLRLARSSQFYTFSINCRQLN*AGRACS
Trigger: GCTGCAGGCTCTGCCCGCCCAGTTCAGCTGCCTGCA...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp CACTCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCCGGTCAGCTCCACGATaGAGTCCGGCAGGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: HSSCLRLARSSQFYTFSIRSAPR*SPAGSG
Trigger: TCCGCTACCTGCCGGACTCCATCGTGGAGCTGACCG...GATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCGCACAGGTCTGCGTaGGTGCCCACGATGCACACC +
Preference number: 4 (lower is better)
Translates to: SSCLRLARSSQFYTFSINPHRSA*VPTMHT
Trigger: GGTGTGCATCGTGGGCACCCACGCAGACCTGTGCGG...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTGCCCGGAGCAGTTCCTaGCTGGGGGTGGACCGCGCC +
Preference number: 4 (lower is better)
Translates to: YCSICCLAQLKVEWRAICARSSS*LGVDRA
Trigger: GGCGCGGTCCACCCCCAGCCAGGAACTGCTCCGGGC...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp ATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTACTGATGGAGCTGGGTaGCCCGGAGCAGTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: MTLDHGNPFAKTHVTPRFTDGAG*PGAVPG
Trigger: GCCAGGAACTGCTCCGGGCCACCCAGCTCCATCAGT...AAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp AATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAACCGAATGACATGAGCTaGCAAGAGCCCATGCAACAG +
Preference number: 4 (lower is better)
Translates to: NHLSPRWAAVSFQVLKEKPNDMS*QEPMQQ
Trigger: CTGTTGCATGGGCTCTTGCCAGCTCATGTCATTCGG...TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp TTGTCACTCAAGTTCACAGAACACGCTGGGGTGAGTGCAGAGGGTCTGCCAGGTCTCTGGAGCATCTTTTaGTCACATGACCCTCGATCA +
Preference number: 4 (lower is better)
Translates to: LSLKFTEHAGVSAEGLPGLWSIF*SHDPRS
Trigger: TGATCGAGGGTCATGTGACCAAAAGATGCTCCAGAG...ACCTGGCAGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAACTTGAGTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCTCAGTGGGTTGTCTTTaGTCTTCCACAAACCCACCC +
Preference number: 4 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFSVGCL*SSTNPP
Trigger: GGGTGGGTTTGTGGAAGATCAAAGACAACCCACTGA...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCACATAGGTGGCCAAGTTaGCCACCAGCACGTATAGGG +
Preference number: 4 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPHRWPS*PPARIG
Trigger: CCCTATACGTGCTGGTGGTCAACTTGGCCACCTATG...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCAAGGGCGATCTGGCGGTaGATGTCCAGACATTTCTCC +
Preference number: 4 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPRAIWR*MSRHFS
Trigger: GGAGAAATGTCTGGACATTCACCGCCAGATCGCCCT...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCTCTGCAGCCGGTGGTTaGGCAGGTATTGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCSAAGG*AGIENG
Trigger: CCCATTTTCAATACCTGCTCAACCACCGGCTGCAGA...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTCACAGTCGCTGGGCCTaGGGTGGCTGGAAATGCAGT +
Preference number: 4 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCHSRWA*GGWKCS
Trigger: ACTGCATTTCCAGCCACCTCAGGCCCAGCGACTGTG...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp AATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAATGCCCTTGGGTTTATTaGGGCAGTAACAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: NHLSPRWAAVSFQVLKEKCPWVY*GSNRVP
Trigger: TGGGACTCTGTTACTGCCTCAATAAACCCAAGGGCA...TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCACCCTCCTCCCAACTTaGAACAAATTCTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLTLLPT*NKFSSF
Trigger: GAAGCTTGAGAATTTGTTTCAAGTTGGGAGGAGGGT...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTCCTCTGACACTGCTTAGCATTTTGAGCCGCTaGAGGCAGCTGAACTGGGCG +
Preference number: 4 (lower is better)
Translates to: GNPFAKTHVTPRFPLTLLSILSR*RQLNWA
Trigger: CGCCCAGTTCAGCTGCCTGCAGCGGCTCAAAATGCT...AAGCAGTGTCAGAGGAAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCTCTTTTCTCCATGTTTCCTGCAGCCTTATaGCCCATCAGGAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VCQVQKMVQVFRCSLFSMFPAAL*PIRSSL
Trigger: CAAGCTGCTCCTGATGGGGCATAAGGCTGCAGGAAA...CATGGAGAAAAGAGAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp ATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTAGCTGGTCACCTCGATaGCCTTGCTCACAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: MTLDHGNPFAKTHVTPRFSWSPR*PCSQGE
Trigger: CTCCCCCTGTGAGCAAGGGCATCGAGGTGACCAGCT...AAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCTCTCCGCACAGGTCTaGGTGGGTGCCCACGATGCA +
Preference number: 4 (lower is better)
Translates to: SSCLRLARSSQFYTFSINLSAQV*VGAHDA
Trigger: TGCATCGTGGGCACCCACGCAGACCTGTGCGGAGAG...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCTCTTTTCTCCATGGGGAAGATCTCTCGGTaGTCAGCAACTGACAGCAAC +
Preference number: 4 (lower is better)
Translates to: VCQVQKMVQVFRCSLFSMGKISR*SATDSN
Trigger: GTTGCTGTCAGTTGCTGAGCACCGAGAGATCTTCCC...CATGGAGAAAAGAGAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTAGCTCCAGCAACAGCTaGAAGTCCTGCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCSSSNS*KSCWAW
Trigger: CCAGGCCCAGCAGGACTTGCAGCTGTTGCTGGAGCT...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp AGTTCTCATGCAGAATATTGCACCCAGTGTGAACTAACGCTAGAAGCTTCAAACACACGCTGGGGTGAGTaGAGAGGGTCTGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SSHAEYCTQCELTLEASNTRWGE*RGSARC
Trigger: GCACCTGGCAGACCCTCTGCACTCACCCCAGCGTGT...GTTTGAAGCTTCTAGCGTTAGTTCACACTGGGTGCAATATTCTGCATGAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTTGTCCATCCCAGCCATaGCGGGGCCCCGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: YCSICCLAQLKVEWRAICCPSQP*RGPGPT
Trigger: TGTCGGCCCGGGGCCCCGCCATGGCTGGGATGGACA...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTCCTCTGACACTGCTTGCCCGAGATAAGGGATaGCACCGAGGTGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GNPFAKTHVTPRFPLTLLARDKG*HRGELV
Trigger: AACCAGCTCACCTCGGTGCCATCCCTTATCTCGGGC...AAGCAGTGTCAGAGGAAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp CACTCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCCTTGTCCCCTCCTCCTaGGCATCCCTCCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: HSSCLRLARSSQFYTFSILVPSS*ASLHSL
Trigger: GAGAGAGTGGAGGGATGCCCAGGAGGAGGGGACAAG...GATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCTCGTCCACCACCTTaGCCAAGCGGCTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SSCLRLARSSQFYTFSINPRPPP*PSGSVP
Trigger: AGGGACTGAGCCGCTTGGCCAAGGTGGTGGACGAGG...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GTTGGAAGAGCAAAGGATTTCCCACCAGCGTGCCAGATGATTTATATAGGCAGGAGGCGGGTGAGGTTGTaGAAGACGTGCTCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: VGRAKDFPPACQMIYIGRRRVRL*KTCSLR
Trigger: TCTCAAGGAGCACGTCTTCCACAACCTCACCCGCCT...CCTGCCTATATAAATCATCTGGCACGCTGGTGGGAAATCCTTTGCTCTTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GTTGGAAGAGCAAAGGATTTCCCACCAGCGTGCCAGATGATTTATATAGGCAGGCCACCAAGGGGGTTATaGCTTGCCATGCGGTCCATA +
Preference number: 4 (lower is better)
Translates to: VGRAKDFPPACQMIYIGRPPRGL*LAMRSI
Trigger: TATGGACCGCATGGCAAGCCATAACCCCCTTGGTGG...CCTGCCTATATAAATCATCTGGCACGCTGGTGGGAAATCCTTTGCTCTTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCCCTGGAAAAGCATGTaGATTGGGCGATCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFPWKSM*IGRSSL
Trigger: AAGAGAGGATCGCCCAATCCACATGCTTTTCCAGGG...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GTTGGAAGAGCAAAGGATTTCCCACCAGCGTGCCAGATGATTTATATAGGCAGGGTTCACAGAACACGCTaGGGTGAGTGCAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VGRAKDFPPACQMIYIGRVHRTR*GECRGS
Trigger: AGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAAC...CCTGCCTATATAAATCATCTGGCACGCTGGTGGGAAATCCTTTGCTCTTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCAAATCAGCCCCATCTTaGCACAGTTCTCATGCAGAA +
Preference number: 4 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLKSAPS*HSSHAE
Trigger: TTCTGCATGAGAACTGTGCCAAGATGGGGCTGATTT...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp AGTTCTCATGCAGAATATTGCACCCAGTGTGAACTAACGCTAGAAGCTTCAAACCTAAGTCATACACGATaGACCGCAGGCCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: SSHAEYCTQCELTLEASNLSHTR*TAGPGR
Trigger: CCTCCCGGGGCCTGCGGTTCATCGTGTATGACTTAG...GTTTGAAGCTTCTAGCGTTAGTTCACACTGGGTGCAATATTCTGCATGAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp AGTTCTCATGCAGAATATTGCACCCAGTGTGAACTAACGCTAGAAGCTTCAAACTCTTGGAACAGGGGCTaGTCACAGTCGGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSHAEYCTQCELTLEASNSWNRG*SQSAWV
Trigger: CACCCACGCCGACTGTGATCAGCCCCTGTTCCAAGA...GTTTGAAGCTTCTAGCGTTAGTTCACACTGGGTGCAATATTCTGCATGAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTTCCAGGGCCACCAGCTaGAGCAGCTGCCGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: YCSICCLAQLKVEWRAICSRATS*SSCRGK
Trigger: CTTCCCCCGGCAGCTGCTGCAGCTGGTGGCCCTGGA...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTGGCCCCGCAGCCGGTTaGTGGACACGTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: YCSICCLAQLKVEWRAICGPAAG*WTRPAP
Trigger: AGGAGCTGGACGTGTCCAGCAACCGGCTGCGGGGCC...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCATTGAAAATGGGCCTTaGGCCGTCGAAGGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFIENGP*AVEGSC
Trigger: ACAAGAACCTTCGACGGCGCAAGGCCCATTTTCAAT...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCAGTGTGCCCCATCTCTaGCCAGCACTAATAACACGT +
Preference number: 4 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCSVPHL*PALITR
Trigger: ACGTGTTATTAGTGCTGGGCAGAGATGGGGCACACT...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp ATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTTCGCTGGGCCTGAGGTaGCTGGAAATGCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: MTLDHGNPFAKTHVTPRFSLGLR*LEMQFL
Trigger: GAGGAACTGCATTTCCAGCCACCTCAGGCCCAGCGA...AAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCACACAGTCGGCGTGGGTaGGTAAACCAAGGCAACATT +
Preference number: 4 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPHSRRG*VNQGNI
Trigger: AATGTTGCCTTGGTTTACCCACCCACGCCGACTGTG...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp AGTTCTCATGCAGAATATTGCACCCAGTGTGAACTAACGCTAGAAGCTTCAAACGGAAGACGTGCTCCTTaGGAGCCGGACTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SSHAEYCTQCELTLEASNGRRAP*EPDCPQ
Trigger: TTGAGGACAGTCCGGCTCTCAAGGAGCACGTCTTCC...GTTTGAAGCTTCTAGCGTTAGTTCACACTGGGTGCAATATTCTGCATGAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTGCACCACATGGCTGTTaGTCTGGACACTGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCAPHGC*SGHCSV
Trigger: CACGCTACAGTGTCCAGATCAACAGCCATGTGGTGC...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp GTTGGAAGAGCAAAGGATTTCCCACCAGCGTGCCAGATGATTTATATAGGCAGGAGTCCAGGCCATTCCTaGAGTAGGACATTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VGRAKDFPPACQMIYIGRSPGHS*SRTFSS
Trigger: GGAACTGAATGTCCTACTTCAGGAATGGCCTGGACT...CCTGCCTATATAAATCATCTGGCACGCTGGTGGGAAATCCTTTGCTCTTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp AATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAAATATTGCACCCAGTGTaGACTAACGCTAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: NHLSPRWAAVSFQVLKEKILHPV*TNARSF
Trigger: GAAGCTTCTAGCGTTAGTTCACACTGGGTGCAATAT...TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp CACTCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCCTCACTCTTCTTGTCTaGGGCTGGCGAGAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: HSSCLRLARSSQFYTFSILTLLV*GWREAV
Trigger: GACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTGAG...GATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp AATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAAACAAAAATCGGTTTGTaGTTTCTAGCAGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: NHLSPRWAAVSFQVLKEKTKIGL*FLAGQS
Trigger: CGACTGCCCTGCTAGAAATCACAAACCGATTTTTGT...TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTGCGTGGAGAGCAGCTTaGATTCTCCCTGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: YCSICCLAQLKVEWRAICAWRAA*ILPAAG
Trigger: CCCGGCCGCAGGGAGAATGCAAGCTGCTCTCCACGC...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp CACTCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCGTTCCCCAGGTTCAGTaGCTCAATGTCCCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: HSSCLRLARSSQFYTFSIVPQVQ*LNVPEV
Trigger: AACCTCGGGGACATTGAGGCACTGAACCTGGGGAAC...GATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTCCTCTGACACTGCTTTCAGCCACAAAAGACTaGCCAGCTAGGTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GNPFAKTHVTPRFPLTLLSATKD*PARLVP
Trigger: TGGGACCAACCTAGCTGGGCAGTCTTTTGTGGCTGA...AAGCAGTGTCAGAGGAAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GTTGGAAGAGCAAAGGATTTCCCACCAGCGTGCCAGATGATTTATATAGGCAGGTTACCATCCGACCTGTaGACCACATGGCTGTTGATC +
Preference number: 4 (lower is better)
Translates to: VGRAKDFPPACQMIYIGRLPSDL*TTWLLI
Trigger: GATCAACAGCCATGTGGTGCACAGGTCGGATGGTAA...CCTGCCTATATAAATCATCTGGCACGCTGGTGGGAAATCCTTTGCTCTTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACGGGGCAAATGATCTCTaGCACTCCTTCCGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSCLRLARSSQFYTFSINGANDL*HSFRSG
Trigger: CCCAGACCGGAAGGAGTGGCAGAGATCATTTGCCCC...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTCGTTGTTGTCTAGCATaGGGCTCTCCAAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCRCCLA*GSPNWP
Trigger: TGGCCAGTTTGGAGAGCCTCATGCTAGACAACAACG...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp ATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTTGGTTGAGCAGGTATTaGAAATGGGCCTTGCGCCGT +
Preference number: 4 (lower is better)
Translates to: MTLDHGNPFAKTHVTPRFWLSRY*KWALRR
Trigger: ACGGCGCAAGGCCCATTTTCAATACCTGCTCAACCA...AAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCGGAGGATCACAGTTCTaGGGTTCAGGTTGTAAAACA +
Preference number: 4 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCGGSQF*GSGCKT
Trigger: TGTTTTACAACCTGAACCTCAGAACTGTGATCCTCC...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp AATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAATGTCTTTCCAGGTGCTaGAAGAGAAAACGGAATTTC +
Preference number: 4 (lower is better)
Translates to: NHLSPRWAAVSFQVLKEKCLSRC*KRKRNF
Trigger: GAAATTCCGTTTTCTCTTTCAGCACCTGGAAAGACA...TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCATTTTGGCAGTGCTTTaGCAATTCCAGGAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFILAVL*QFQEVV
Trigger: AACCACTTCCTGGAATTGTCAAAGCACTGCCAAAAT...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTGCGGGCAGCTGGTTGTaGCTGAGGTTGAGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: YCSICCLAQLKVEWRAICAGSWL*LRLSFR
Trigger: GCGGAAGCTCAACCTCAGCCACAACCAGCTGCCCGC...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCAGTACTCTGTGTAAGTTaGGGAAGATCTCTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPVLCVS*GRSLGA
Trigger: AGCACCGAGAGATCTTCCCCAACTTACACAGAGTAC...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCTTTGGTAATGATGCATaGCTAGCAATGGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCFGNDA*LAMDRV
Trigger: CACCCTGTCCATTGCTAGCCATGCATCATTACCAAA...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACGGCAGGGACCTTCATTaGAAAGAAGGGAAGGGACAC +
Preference number: 4 (lower is better)
Translates to: SSCLRLARSSQFYTFSINGRDLH*KEGKGH
Trigger: GTGTCCCTTCCCTTCTTTTCAATGAAGGTCCCTGCC...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp CACTCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCCAAAGTAGAGTAGCTTaGCGCTCTCATGCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: HSSCLRLARSSQFYTFSIQSRVA*RSHAGR
Trigger: CCTACCTGCATGAGAGCGGCAAGCTACTCTACTTTG...GATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCGAGTGCTCTAAATACTaGCACCTGTACTGTAACTAT +
Preference number: 4 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFECSKY*HLYCNY
Trigger: ATAGTTACAGTACAGGTGGCAGTATTTAGAGCACTC...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTCCTCTGACACTGCTTACTTGTACCAAGCTGTaGACCCATTCAAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GNPFAKTHVTPRFPLTLLTCTKL*THSKAC
Trigger: GCAAGCCTTTGAATGGGTCCACAGCTTGGTACAAGT...AAGCAGTGTCAGAGGAAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCAGTTCTGCACATAGCATaGGAACTTGTACCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPVLHIA*ELVPSC
Trigger: ACAGCTTGGTACAAGTTCCCATGCTATGTGCAGAAC...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTGCCAGGTGCAAAAGATaGTCCAGGTGTTCAGATGCT +
Preference number: 4 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCARCKR*SRCSDA
Trigger: AGCATCTGAACACCTGGACCATCTTTTGCACCTGGC...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp GGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTCCTCTGACACTGCTTCACACACGAGAACTGTaGCAAAAGGATTCACCAGAT +
Preference number: 4 (lower is better)
Translates to: GNPFAKTHVTPRFPLTLLHTREL*QKDSPD
Trigger: ATCTGGTGAATCCTTTTGTCACAGTTCTCGTGTGTG...AAGCAGTGTCAGAGGAAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTTCGCGGTCTTCAGGTTaGCACTGTCCATCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: YCSICCLAQLKVEWRAICSRSSG*HCPSQP
Trigger: TGGCTGGGATGGACAGTGGCAACCTGAAGACCGCGA...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACATTAATCCAGGCTTCTaGATGGGGCACCTCGTTCTG +
Preference number: 4 (lower is better)
Translates to: SSCLRLARSSQFYTFSININPGF*MGHLVL
Trigger: CAGAACGAGGTGCCCCATGCAGAAGCCTGGATTAAT...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCATCTCATGCAGAATATTaGACCCAGTGTGAACTAACG +
Preference number: 4 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPSHAEY*TQCELT
Trigger: CGTTAGTTCACACTGGGTGCAATATTCTGCATGAGA...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp GGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTCCTCTGACACTGCTTGGTATTACTAGTTCTTaGCAGGAGACCGTCCAATCA +
Preference number: 4 (lower is better)
Translates to: GNPFAKTHVTPRFPLTLLGITSS*QETVQS
Trigger: TGATTGGACGGTCTCCTGCCAAGAACTAGTAATACC...AAGCAGTGTCAGAGGAAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR CAA 72 bp AGTAAAAGAGTAGCGAGTACCAGCAACTCACTCTTCTaGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATAC +
Preference number: 4 (lower is better)
Translates to: SKRVASTSNSLF*SEAGEKQSVLY
Trigger: GTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTGAGTTGCTGGTACTCGCTACTCTTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
3UTR CAA 72 bp TGCAGGAATAGAAACCCTAACAAACTTGGAGGGCATTaGTTTGAGAGGCAAGGGACGCCTTGCTTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: CRNRNPNKLGGH*FERQGTPCLEN
Trigger: GTTTTCTAAGCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCTATTCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCAGGAAAACAAAATCCCTaGGAAGCCATTCGACTTTTT +
Preference number: 4 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPGKQNP*EAIRLF
Trigger: AAAAAGTCGAATGGCTTCTCAGGGATTTTGTTTTCC...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACGTTATGGAACAGCAATaGACGTCAGTCGATCCCTCT +
Preference number: 4 (lower is better)
Translates to: SSCLRLARSSQFYTFSINVMEQQ*TSVDPS
Trigger: AGAGGGATCGACTGACGTTCATTGCTGTTCCATAAC...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp CACTCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCTCCAGGAAGTGGTTTTaGTACCACAAGTTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: HSSCLRLARSSQFYTFSISRKWF*YHKLQE
Trigger: TTCCTGCAACTTGTGGTATCAAAACCACTTCCTGGA...GATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp AGTTCTCATGCAGAATATTGCACCCAGTGTGAACTAACGCTAGAAGCTTCAAACTCACAAACCATGGCATaGAAAACAACACGCACCCCA +
Preference number: 4 (lower is better)
Translates to: SSHAEYCTQCELTLEASNSQTMA*KTTRTP
Trigger: TGGGGTGCGTGTTGTTTTTCATGCCATGGTTTGTGA...GTTTGAAGCTTCTAGCGTTAGTTCACACTGGGTGCAATATTCTGCATGAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTCCGGCAGGTAGCGGATaGGGTTATTATCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: YCSICCLAQLKVEWRAICPAGSG*GYYPAT
Trigger: TGTGGCTGGATAATAACCGCATCCGCTACCTGCCGG...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp ATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTGTCCAGGTGTTCAGATaGTCTCTTTTCTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: MTLDHGNPFAKTHVTPRFVQVFR*SLFSME
Trigger: TTCCATGGAGAAAAGAGAGCATCTGAACACCTGGAC...AAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp CACTCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCGATTTCCCACCAGCGTaGCAGATGATTTATATAGGC +
Preference number: 4 (lower is better)
Translates to: HSSCLRLARSSQFYTFSIDFPPA*QMIYIG
Trigger: GCCTATATAAATCATCTGGCACGCTGGTGGGAAATC...GATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTAGGCAAGGGACGCCTTaGTTAGAAAACATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCRQGTP*LENIPL
Trigger: AAGAGGAATGTTTTCTAAGCAAGGCGTCCCTTGCCT...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp CACTCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAAAGAGGGATCCCTCTaGAAGAAGACATTGAGGATG +
Preference number: 4 (lower is better)
Translates to: HSSCLRLARSSQFYTFSIKEGSL*KKTLRM
Trigger: CATCCTCAATGTCTTCTTCCAGAGGGATCCCTCTTT...GATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp AATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAAAGTGAAATTAATGCCTaGGGCACAAAATATTCTACA +
Preference number: 4 (lower is better)
Translates to: NHLSPRWAAVSFQVLKEKSEINA*GTKYST
Trigger: TGTAGAATATTTTGTGCCCCAGGCATTAATTTCACT...TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTGAACTGAAATCTGAGTaGTCTAAATACTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCELKSE*SKYCHL
Trigger: CAGGTGGCAGTATTTAGAGCACTCAGATTTCAGTTC...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp ATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTACTATGGCTTATATGTaGACGGAAAACAAAATCCCT +
Preference number: 4 (lower is better)
Translates to: MTLDHGNPFAKTHVTPRFTMAYM*TENKIP
Trigger: AGGGATTTTGTTTTCCGTGCACATATAAGCCATAGT...AAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTAAAACATTCCTCTTGTaGTTAGTGAATCACCTATCG +
Preference number: 4 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCKTFLL*LVNHLS
Trigger: CGATAGGTGATTCACTAAGCACAAGAGGAATGTTTT...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR TCA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACAATGCAAACATCGTCTaGTCCCATTCGATTTTTATC +
Preference number: 4 (lower is better)
Translates to: SSCLRLARSSQFYTFSINNANIV*SHSIFI
Trigger: GATAAAAATCGAATGGGATCAGACGATGTTTGCATT...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR GCA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTAAGGGGGTTATGGCTTaGCATGCGGTCCATATATTT +
Preference number: 4 (lower is better)
Translates to: YCSICCLAQLKVEWRAICKGVMA*HAVHIF
Trigger: AAATATATGGACCGCATGGCAAGCCATAACCCCCTT...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CCA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCAACACTTAATCCATaGGCTAACAGAGAGATTTTT +
Preference number: 4 (lower is better)
Translates to: SSCLRLARSSQFYTFSINPTLNP*ANREIF
Trigger: AAAAATCTCTCTGTTAGCCCATGGATTAAGTGTTGG...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS GCA 90 bp GGCCGAGCTCGGCCACCGCCGGGGGCAGCCGGGCGAAGCGGTTCCTaGGCAGGACCAGGACGCGCAGGCTGCCCAGCGCCGACCCCAGCC +
Preference number: 5 (lower is better)
Translates to: GRARPPPGAAGRSGS*AGPGRAGCPAPTPA
Trigger: GGCTGGGGTCGGCGCTGGGCAGCCTGCGCGTCCTGGTCCTGCGCAGGAACCGCTTCGCCCGGCTGCCCCCGGCGGTGGCCGAGCTCGGCC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 90 bp CCGAGCGCGTGGAGAGCAGCTTGCATTCTCCCTGCGGCCGGGCCATaGGCGCGCCGGGCAGCAGGGCCGCCGCCCGCGCGCCGCGGAGGA +
Preference number: 5 (lower is better)
Translates to: PSAWRAACILPAAGP*ARRAAGPPPARRGG
Trigger: TCCTCCGCGGCGCGCGGGCGGCGGCCCTGCTGCCCGGCGCGCCCATGGCCCGGCCGCAGGGAGAATGCAAGCTGCTCTCCACGCGCTCGG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS GCA 90 bp GCAGCCGGGCGAAGCGGTTCCTGCGCAGGACCAGGACGCGCAGGCTaGCCAGCGCCGACCCCAGCCCCTCGGGTACCTCCTCCAGGCCGT +
Preference number: 5 (lower is better)
Translates to: AAGRSGSCAGPGRAG*PAPTPAPRVPPPGR
Trigger: ACGGCCTGGAGGAGGTACCCGAGGGGCTGGGGTCGGCGCTGGGCAGCCTGCGCGTCCTGGTCCTGCGCAGGAACCGCTTCGCCCGGCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 90 bp TGGCACGCAGGGCGGCGTCCCGCCACAGCCTCGCGGTCTTCAGGTTaGCACTGTCCATCCCAGCCATGGCGGGGCCCCGGGCCGACAGCC +
Preference number: 5 (lower is better)
Translates to: WHAGRRPATASRSSG*HCPSQPWRGPGPTA
Trigger: GGCTGTCGGCCCGGGGCCCCGCCATGGCTGGGATGGACAGTGGCAACCTGAAGACCGCGAGGCTGTGGCGGGACGCCGCCCTGCGTGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS GCA 90 bp GGCTGCGTGGGGGCTGGCAGAGCGCAGCTCGAAGTCCCGGGCCAGTaGCTCGTCCACCACCTTGGCCAAGCGGCTCAGTCCCTCCGCGTC +
Preference number: 5 (lower is better)
Translates to: GCVGAGRAQLEVPGQ*LVHHLGQAAQSLRV
Trigger: GACGCGGAGGGACTGAGCCGCTTGGCCAAGGTGGTGGACGAGGCACTGGCCCGGGACTTCGAGCTGCGCTCTGCCAGCCCCCACGCAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 90 bp GCTCCTCCAGGGCCACCAGCTGCAGCAGCTGCCGGGGGAAGGCAGTaGGCTGGTTGTGATCCACGTCCAGGGTGCGCAGGCGGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: APPGPPAAAAAGGRQ*AGCDPRPGCAGGRG
Trigger: GCCTCTCCCGCCTGCGCACCCTGGACGTGGATCACAACCAGCTCACTGCCTTCCCCCGGCAGCTGCTGCAGCTGGTGGCCCTGGAGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 90 bp GCCACCAGCTGCAGCAGCTGCCGGGGGAAGGCAGTGAGCTGGTTGTaGTCCACGTCCAGGGTGCGCAGGCGGGAGAGGCAGGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: ATSCSSCRGKAVSWL*STSRVRRRERQERE
Trigger: CTCCCTCTCCTGCCTCTCCCGCCTGCGCACCCTGGACGTGGATCACAACCAGCTCACTGCCTTCCCCCGGCAGCTGCTGCAGCTGGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 90 bp CCTCCAGCTCACGCTCTCCGCACAGGTCTGCGTGGGTGCCCACGATaGACACCACCGCGTGGGGCACTCTCGCCCCGACCCGATGCAAGA +
Preference number: 5 (lower is better)
Translates to: PPAHALRTGLRGCPR*TPPRGALSPRPDAR
Trigger: TCTTGCATCGGGTCGGGGCGAGAGTGCCCCACGCGGTGGTGTGCATCGTGGGCACCCACGCAGACCTGTGCGGAGAGCGTGAGCTGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 90 bp TCTCCGCACAGGTCTGCGTGGGTGCCCACGATGCACACCACCGCGTaGGGCACTCTCGCCCCGACCCGATGCAAGAAGGAGCCCACGGTG +
Preference number: 5 (lower is better)
Translates to: SPHRSAWVPTMHTTA*GTLAPTRCKKEPTV
Trigger: CACCGTGGGCTCCTTCTTGCATCGGGTCGGGGCGAGAGTGCCCCACGCGGTGGTGTGCATCGTGGGCACCCACGCAGACCTGTGCGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 90 bp CAGAGCGCAGCTCGAAGTCCCGGGCCAGTGCCTCGTCCACCACCTTaGCCAAGCGGCTCAGTCCCTCCGCGTCGTGCTTCTCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: QSAARSPGPVPRPPP*PSGSVPPRRASPAG
Trigger: CCCTGCAGGAGAAGCACGACGCGGAGGGACTGAGCCGCTTGGCCAAGGTGGTGGACGAGGCACTGGCCCGGGACTTCGAGCTGCGCTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 90 bp GGCCCCGGGAGGCATCGGCCGTCCAGCTGGTCACCTCGATGCCCTTaGTCACAGGGGGAGGTGACGGTGGGTAGCACTTCTCCTTGTCCC +
Preference number: 5 (lower is better)
Translates to: GPGRHRPSSWSPRCP*SQGEVTVGSTSPCP
Trigger: GGGACAAGGAGAAGTGCTACCCACCGTCACCTCCCCCTGTGAGCAAGGGCATCGAGGTGACCAGCTGGACGGCCGATGCCTCCCGGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 90 bp ACCGCAGGCCCCGGGAGGCATCGGCCGTCCAGCTGGTCACCTCGATaGCCTTGCTCACAGGGGGAGGTGACGGTGGGTAGCACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: TAGPGRHRPSSWSPR*PCSQGEVTVGSTSP
Trigger: AGGAGAAGTGCTACCCACCGTCACCTCCCCCTGTGAGCAAGGGCATCGAGGTGACCAGCTGGACGGCCGATGCCTCCCGGGGCCTGCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 90 bp GAGAGCTGGCCAAAGTGGTCGGGCAGCACCGCGATCTGGTTCCCCTaGAGCACGAGCTCCTCCAGGCCGGTCAGCTCCACGATGGAGTCC +
Preference number: 5 (lower is better)
Translates to: ESWPKWSGSTAIWFP*STSSSRPVSSTMES
Trigger: GGACTCCATCGTGGAGCTGACCGGCCTGGAGGAGCTCGTGCTGCAGGGGAACCAGATCGCGGTGCTGCCCGACCACTTTGGCCAGCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 90 bp TCCAGACATTTCTCCTCCAGCTCACGCTCTCCGCACAGGTCTGCGTaGGTGCCCACGATGCACACCACCGCGTGGGGCACTCTCGCCCCG +
Preference number: 5 (lower is better)
Translates to: SRHFSSSSRSPHRSA*VPTMHTTAWGTLAP
Trigger: CGGGGCGAGAGTGCCCCACGCGGTGGTGTGCATCGTGGGCACCCACGCAGACCTGTGCGGAGAGCGTGAGCTGGAGGAGAAATGTCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 90 bp GGCCGTCCAGCTGGTCACCTCGATGCCCTTGCTCACAGGGGGAGGTaGCGGTGGGTAGCACTTCTCCTTGTCCCCTCCTCCTGGGCATCC +
Preference number: 5 (lower is better)
Translates to: GRPAGHLDALAHRGR*RWVALLLVPSSWAS
Trigger: GGATGCCCAGGAGGAGGGGACAAGGAGAAGTGCTACCCACCGTCACCTCCCCCTGTGAGCAAGGGCATCGAGGTGACCAGCTGGACGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 90 bp TCCTCGGTGAGGCAGTGGCGCAGCAAAGTCTTTCCTGCAGCCTTATaGCCCATCAGGAGCAGCTTGAGCCGGGGCTGCACCGCCGGCTGG +
Preference number: 5 (lower is better)
Translates to: SSVRQWRSKVFPAAL*PIRSSLSRGCTAGW
Trigger: CCAGCCGGCGGTGCAGCCCCGGCTCAAGCTGCTCCTGATGGGGCATAAGGCTGCAGGAAAGACTTTGCTGCGCCACTGCCTCACCGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 90 bp AGAGCCCATGCAACAGAAAGCCCTCCACATACTGATGGAGCTGGGTaGCCCGGAGCAGTTCCTGGCTGGGGGTGGACCGCGCCATGGGCG +
Preference number: 5 (lower is better)
Translates to: RAHATESPPHTDGAG*PGAVPGWGWTAPWA
Trigger: CGCCCATGGCGCGGTCCACCCCCAGCCAGGAACTGCTCCGGGCCACCCAGCTCCATCAGTATGTGGAGGGCTTTCTGTTGCATGGGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 90 bp CCCAAGCGCGCCGAGTCCCACCAGCTTAGCCACAGTCGCTGGGCCTaGGGTGGCTGGAAATGCAGTTCCTCCAGCACCTGCCAGGATCGA +
Preference number: 5 (lower is better)
Translates to: PKRAESHQLSHSRWA*GGWKCSSSSTCQDR
Trigger: TCGATCCTGGCAGGTGCTGGAGGAACTGCATTTCCAGCCACCTCAGGCCCAGCGACTGTGGCTAAGCTGGTGGGACTCGGCGCGCTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 90 bp GTCGAAGGTTCTTGTCCGAAACGCCATAGTAGGCTGCGTGGGGGCTaGCAGAGCGCAGCTCGAAGTCCCGGGCCAGTGCCTCGTCCACCA +
Preference number: 5 (lower is better)
Translates to: VEGSCPKRHSRLRGG*QSAARSPGPVPRPP
Trigger: TGGTGGACGAGGCACTGGCCCGGGACTTCGAGCTGCGCTCTGCCAGCCCCCACGCAGCCTACTATGGCGTTTCGGACAAGAACCTTCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 90 bp AATGTCCAGACATTTCTCCTCCAGCTCACGCTCTCCGCACAGGTCTaGGTGGGTGCCCACGATGCACACCACCGCGTGGGGCACTCTCGC +
Preference number: 5 (lower is better)
Translates to: NVQTFLLQLTLSAQV*VGAHDAHHRVGHSR
Trigger: GCGAGAGTGCCCCACGCGGTGGTGTGCATCGTGGGCACCCACGCAGACCTGTGCGGAGAGCGTGAGCTGGAGGAGAAATGTCTGGACATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 90 bp GGTTCCCCTGCAGCACGAGCTCCTCCAGGCCGGTCAGCTCCACGATaGAGTCCGGCAGGTAGCGGATGCGGTTATTATCCAGCCACAAGG +
Preference number: 5 (lower is better)
Translates to: GSPAARAPPGRSAPR*SPAGSGCGYYPATR
Trigger: CCTTGTGGCTGGATAATAACCGCATCCGCTACCTGCCGGACTCCATCGTGGAGCTGACCGGCCTGGAGGAGCTCGTGCTGCAGGGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 90 bp CTCAGTCCCTCCGCGTCGTGCTTCTCCTGCAGGGCGATCTGGCGGTaGATGTCCAGACATTTCTCCTCCAGCTCACGCTCTCCGCACAGG +
Preference number: 5 (lower is better)
Translates to: LSPSASCFSCRAIWR*MSRHFSSSSRSPHR
Trigger: CCTGTGCGGAGAGCGTGAGCTGGAGGAGAAATGTCTGGACATTCACCGCCAGATCGCCCTGCAGGAGAAGCACGACGCGGAGGGACTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 90 bp CGGTGCTCAGCAACTGACAGCAACTTGTCCCGAAGGCGTCGTAAGTaGCGCGGGTCCCTGCAGCTAACAGGCAACACGGGGGAGAGGATC +
Preference number: 5 (lower is better)
Translates to: RCSATDSNLSRRRRK*RGSLQLTGNTGERI
Trigger: GATCCTCTCCCCCGTGTTGCCTGTTAGCTGCAGGGACCCGCGCCACTTACGACGCCTTCGGGACAAGTTGCTGTCAGTTGCTGAGCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 90 bp GCAGCAAAGTCTTTCCTGCAGCCTTATGCCCCATCAGGAGCAGCTTaGGCCGGGGCTGCACCGCCGGCTGGGAATGAGCCAGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: AAKSFLQPYAPSGAA*AGAAPPAGNEPVPS
Trigger: AGAAGGAACTGGCTCATTCCCAGCCGGCGGTGCAGCCCCGGCTCAAGCTGCTCCTGATGGGGCATAAGGCTGCAGGAAAGACTTTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 90 bp ATCCAGCCACAAGGTGAGAAGCCGGCCCAGGCCCGAGATAAGGGATaGCACCGAGGTGAGCTGGTTGCGACTAAGGTAGAGCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: IQPQGEKPAQARDKG*HRGELVATKVELLQ
Trigger: CTGGAGGAGCTCTACCTTAGTCGCAACCAGCTCACCTCGGTGCCATCCCTTATCTCGGGCCTGGGCCGGCTTCTCACCTTGTGGCTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 90 bp TTGTCTTTGATCTTCCACAAACCCACCCGGGAGAGCTGGCCAAAGTaGTCGGGCAGCACCGCGATCTGGTTCCCCTGCAGCACGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LSLIFHKPTRESWPK*SGSTAIWFPCSTSS
Trigger: GGAGCTCGTGCTGCAGGGGAACCAGATCGCGGTGCTGCCCGACCACTTTGGCCAGCTCTCCCGGGTGGGTTTGTGGAAGATCAAAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 90 bp AACTCCTCGAAGAGGTTGGAGGAGAGGTTGAGCATTTTGAGCCGCTaGAGGCAGCTGAACTGGGCGGGCAGAGCCTGCAGCCCGTTGTTG +
Preference number: 5 (lower is better)
Translates to: NSSKRLEERLSILSR*RQLNWAGRACSPLL
Trigger: CAACAACGGGCTGCAGGCTCTGCCCGCCCAGTTCAGCTGCCTGCAGCGGCTCAAAATGCTCAACCTCTCCTCCAACCTCTTCGAGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 90 bp ATCAGTGGGTTGTCTTTGATCTTCCACAAACCCACCCGGGAGAGCTaGCCAAAGTGGTCGGGCAGCACCGCGATCTGGTTCCCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ISGLSLIFHKPTRES*PKWSGSTAIWFPCS
Trigger: GCTGCAGGGGAACCAGATCGCGGTGCTGCCCGACCACTTTGGCCAGCTCTCCCGGGTGGGTTTGTGGAAGATCAAAGACAACCCACTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 90 bp GCTGGATCACCTCATAACTTTCATCCCCAGCTAAGTCATACACGATaGACCGCAGGCCCCGGGAGGCATCGGCCGTCCAGCTGGTCACCT +
Preference number: 5 (lower is better)
Translates to: AGSPHNFHPQLSHTR*TAGPGRHRPSSWSP
Trigger: AGGTGACCAGCTGGACGGCCGATGCCTCCCGGGGCCTGCGGTTCATCGTGTATGACTTAGCTGGGGATGAAAGTTATGAGGTGATCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 90 bp GGCAACACGGGGGAGAGGATCTGCAGCCGGTGGTTGAGCAGGTATTaGAAATGGGCCTTGCGCCGTCGAAGGTTCTTGTCCGAAACGCCA +
Preference number: 5 (lower is better)
Translates to: GNTGERICSRWLSRY*KWALRRRRFLSETP
Trigger: TGGCGTTTCGGACAAGAACCTTCGACGGCGCAAGGCCCATTTTCAATACCTGCTCAACCACCGGCTGCAGATCCTCTCCCCCGTGTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS-3UTR CAA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCAGGCCCCGCAGCCGGTaGCTGGACACGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCRPRSR*LDTSSS
Trigger: GGAGCTGGACGTGTCCAGCAACCGGCTGCGGGGCCT...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS GCA 90 bp GGCAACATTTACTCGCTCGCTGCCGTTCTTGGGGCAAATGATCTCTaGCACTCCTTCCGGTCTGGGCTGACTCAGCAACTCCCCGTAGGA +
Preference number: 5 (lower is better)
Translates to: GNIYSLAAVLGANDL*HSFRSGLTQQLPVG
Trigger: TCCTACGGGGAGTTGCTGAGTCAGCCCAGACCGGAAGGAGTGGCAGAGATCATTTGCCCCAAGAACGGCAGCGAGCGAGTAAATGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520091.1
ENST00000520715.5
CDS-3UTR CAA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCCGCTCGCTGCCGTTCTaGGGGCAAATGATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLRSLPF*GQMISA
Trigger: GGCAGAGATCATTTGCCCCAAGAACGGCAGCGAGCG...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS GCA 90 bp GGCAACATTTACTCGCTCGCTGCCGTTCTTGGGGCAAATGATCTCTaGCACTCCTTCCGGTCTGGGCTGACTCAGCAACTCCCCTTAGGT +
Preference number: 5 (lower is better)
Translates to: GNIYSLAAVLGANDL*HSFRSGLTQQLPLG
Trigger: ACCTAAGGGGAGTTGCTGAGTCAGCCCAGACCGGAAGGAGTGGCAGAGATCATTTGCCCCAAGAACGGCAGCGAGCGAGTAAATGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521881.5
CDS-3UTR CAA 90 bp CACTCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCGGCGGCGGCGCCTCCTaGTCTCCGTTTCCCCGGGCT +
Preference number: 5 (lower is better)
Translates to: HSSCLRLARSSQFYTFSIGGGAS*SPFPRA
Trigger: AGCCCGGGGAAACGGAGACAAGGAGGCGCCGCCGCC...GATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp AATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAAACCTCCTCCAGGCCGTaGTTCCCCAGGTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: NHLSPRWAAVSFQVLKEKTSSRP*FPRFSA
Trigger: GGCACTGAACCTGGGGAACAACGGCCTGGAGGAGGT...TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp TTGTCACTCAAGTTCACAGAACACGCTGGGGTGAGTGCAGAGGGTCTGCCAGGTAGAGCCTGCAGCCCGTaGTTGTCTAGCATGAGGCTC +
Preference number: 5 (lower is better)
Translates to: LSLKFTEHAGVSAEGLPGRACSP*LSSMRL
Trigger: GAGCCTCATGCTAGACAACAACGGGCTGCAGGCTCT...ACCTGGCAGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAACTTGAGTGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCTGGAAGACGTGCTCCTaGAGAGCCGGACTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLWKTCS*RAGLSS
Trigger: TGAGGACAGTCCGGCTCTCAAGGAGCACGTCTTCCA...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS CCA 90 bp GTTCCTCCAGCACCTGCCAGGATCGAGGCAGTACTCTGTGTAAGTTaGGGAAGATCTCTCGGTGCTCAGCAACTGACAGCAACTTGTCCC +
Preference number: 5 (lower is better)
Translates to: VPPAPARIEAVLCVS*GRSLGAQQLTATCP
Trigger: GGGACAAGTTGCTGTCAGTTGCTGAGCACCGAGAGATCTTCCCCAACTTACACAGAGTACTGCCTCGATCCTGGCAGGTGCTGGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS-3UTR CAA 90 bp GTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCTCTTTTCTCCATGGTCACCTCGATGCCCTaGCTCACAGGGGGAGGTGAC +
Preference number: 5 (lower is better)
Translates to: VCQVQKMVQVFRCSLFSMVTSMP*LTGGGD
Trigger: GTCACCTCCCCCTGTGAGCAAGGGCATCGAGGTGAC...CATGGAGAAAAGAGAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp TTGTCACTCAAGTTCACAGAACACGCTGGGGTGAGTGCAGAGGGTCTGCCAGGTGTGGTTGAGCAGGTATaGAAAATGGGCCTTGCGCCG +
Preference number: 5 (lower is better)
Translates to: LSLKFTEHAGVSAEGLPGVVEQV*KMGLAP
Trigger: CGGCGCAAGGCCCATTTTCAATACCTGCTCAACCAC...ACCTGGCAGACCCTCTGCACTCACCCCAGCGTGTTCTGTGAACTTGAGTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS GCA 90 bp CAGGATCGAGGCAGTACTCTGTGTAAGTTGGGGAAGATCTCTCGGTaGTCAGCAACTGACAGCAACTTGTCCCGAAGGCGTCGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: QDRGSTLCKLGKISR*SATDSNLSRRRRKW
Trigger: CCACTTACGACGCCTTCGGGACAAGTTGCTGTCAGTTGCTGAGCACCGAGAGATCTTCCCCAACTTACACAGAGTACTGCCTCGATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 90 bp CTGGGCCTGGACATGAGGCTTAAGCAGCAACCGAATGACATGAGCTaGCAAGAGCCCATGCAACAGAAAGCCCTCCACATACTGATGGAG +
Preference number: 5 (lower is better)
Translates to: LGLDMRLKQQPNDMS*QEPMQQKALHILME
Trigger: CTCCATCAGTATGTGGAGGGCTTTCTGTTGCATGGGCTCTTGCCAGCTCATGTCATTCGGTTGCTGCTTAAGCCTCATGTCCAGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 90 bp GGGGTTATGGCTTGCCATGCGGTCCATATATTTGGTAATGATGCATaGCTAGCAATGGACAGGGTGTCTGGCTGCAGGACTCCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GVMACHAVHIFGNDA*LAMDRVSGCRTPLA
Trigger: TGCCAGGGGAGTCCTGCAGCCAGACACCCTGTCCATTGCTAGCCATGCATCATTACCAAATATATGGACCGCATGGCAAGCCATAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 90 bp ACCAACATTCTTCTTGGAACAGGGGCTGATCACAGTCGGCGTGGGTaGGTAAACCAAGGCAACATTTACTCGCTCGCTGCCGTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: TNILLGTGADHSRRG*VNQGNIYSLAAVLG
Trigger: CCCAAGAACGGCAGCGAGCGAGTAAATGTTGCCTTGGTTTACCCACCCACGCCGACTGTGATCAGCCCCTGTTCCAAGAAGAATGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276282.7
ENST00000520715.5
ENST00000644336.1
ENST00000644614.1
CDS-3UTR CAA 90 bp CACTCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCCGCGTGGAGAGCAGCTaGCATTCTCCCTGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: HSSCLRLARSSQFYTFSIRVESS*HSPCGR
Trigger: CCGGCCGCAGGGAGAATGCAAGCTGCTCTCCACGCG...GATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp GGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTCCTCTGACACTGCTTGTGAGCTGGCGCAGGTaGCTCCGCAGCTTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GNPFAKTHVTPRFPLTLLVSWRR*LRSFLA
Trigger: TGCCAGGAAGCTGCGGAGCAACCTGCGCCAGCTCAC...AAGCAGTGTCAGAGGAAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTGCCTCGTCCACCACCTaGGCCAAGCGGCTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCASSTT*AKRLSP
Trigger: GGGACTGAGCCGCTTGGCCAAGGTGGTGGACGAGGC...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS CCA 90 bp AGTATGAAGATACTTGGAACAGGGGCTGATCACAGTCGGCGTGGGTaGGTAAACCAAGGCAACATTTACTCGCTCGCTGCCGTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: SMKILGTGADHSRRG*VNQGNIYSLAAVLG
Trigger: CCCAAGAACGGCAGCGAGCGAGTAAATGTTGCCTTGGTTTACCCACCCACGCCGACTGTGATCAGCCCCTGTTCCAAGTATCTTCATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520091.1
ENST00000521881.5
CDS-3UTR CAA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACAGGGCGGTCAGCCGGTaGTGGCTCACGTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SSCLRLARSSQFYTFSINRAVSR*WLTSSS
Trigger: CGAGCTGGACGTGAGCCACAACCGGCTGACCGCCCT...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCAGCCTGCAGCCCGTTGTaGTCTAGCATGAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPACSPL*SSMRLS
Trigger: GGAGAGCCTCATGCTAGACAACAACGGGCTGCAGGC...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCGAGAGGTTGAGCATTTaGAGCCGCTGCAGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCERLSI*SRCRQL
Trigger: CAGCTGCCTGCAGCGGCTCAAAATGCTCAACCTCTC...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCAGGTTGGAGGAGAGGTaGAGCATTTTGAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFRLEER*SILSRC
Trigger: GCAGCGGCTCAAAATGCTCAACCTCTCCTCCAACCT...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCATGAGGCGGGTGAGGTaGTGGAAGACGTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCMRRVR*WKTCSL
Trigger: CAAGGAGCACGTCTTCCACAACCTCACCCGCCTCAT...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCGACCCATTCAAAGGCTaGCCCTTGGGTTTATTGAGG +
Preference number: 5 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLDPFKG*PLGLLR
Trigger: CCTCAATAAACCCAAGGGCAAGCCTTTGAATGGGTC...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp AGTTCTCATGCAGAATATTGCACCCAGTGTGAACTAACGCTAGAAGCTTCAAACTCAATGTCCCCGAGGTaGGCCGGCAGCACGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SSHAEYCTQCELTLEASNSMSPR*AGSTSW
Trigger: CCAGCTCGTGCTGCCGGCCAACCTCGGGGACATTGA...GTTTGAAGCTTCTAGCGTTAGTTCACACTGGGTGCAATATTCTGCATGAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCGCAACTGACAGCAACTaGTCCCGAAGGCGTCGTAAG +
Preference number: 5 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCATDSN*SRRRRK
Trigger: CTTACGACGCCTTCGGGACAAGTTGCTGTCAGTTGC...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp GTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCTCTTTTCTCCATGCAAGTAGCGCGCTCCTaGGAGGATCACAGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: VCQVQKMVQVFRCSLFSMQVARS*EDHSSE
Trigger: CTCAGAACTGTGATCCTCCAAGGAGCGCGCTACTTG...CATGGAGAAAAGAGAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp TTCCTCTTGTGCTTAGTGAATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCAGCAACTCACTCTTCTaGTCTGAGGCTGGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: FLLCLVNHLSPRWAAVSFSNSLF*SEAGEK
Trigger: CTTCTCGCCAGCCTCAGACAAGAAGAGTGAGTTGCT...GAAAGACACAGCAGCCCACCGAGGCGATAGGTGATTCACTAAGCACAAGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS TCA 90 bp TGTACCAAGCTGTGGACCCATTCAAAGGCTTGCCCTTGGGTTTATTaGGGCAGTAACAGAGTCCCATCTTCTCCAGCAGCTCCAGCAACA +
Preference number: 5 (lower is better)
Translates to: CTKLWTHSKACPWVY*GSNRVPSSPAAPAT
Trigger: TGTTGCTGGAGCTGCTGGAGAAGATGGGACTCTGTTACTGCCTCAATAAACCCAAGGGCAAGCCTTTGAATGGGTCCACAGCTTGGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 90 bp GTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATaGTCTCTTTTCTCCATGGAAATTCCACAGCCACAAACGTCACTG +
Preference number: 5 (lower is better)
Translates to: VQRVCQVQKMVQVFR*SLFSMEIPQPQTSL
Trigger: CAGTGACGTTTGTGGCTGTGGAATTTCCATGGAGAAAAGAGAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000520715.5
ENST00000521881.5
CDS CCA 90 bp ATTAATCCAGGCTTCTGCATGGGGCACCTCGTTCTGCACATAGCATaGGAACTTGTACCAAGCTGTGGACCCATTCAAAGGCTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: INPGFCMGHLVLHIA*ELVPSCGPIQRLAL
Trigger: AAGGGCAAGCCTTTGAATGGGTCCACAGCTTGGTACAAGTTCCCATGCTATGTGCAGAACGAGGTGCCCCATGCAGAAGCCTGGATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS-3UTR CAA 90 bp AATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAAGGAAAAGCATGTGGATaGGGCGATCCTCTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: NHLSPRWAAVSFQVLKEKGKACG*GDPLLR
Trigger: CCTTAAGAGAGGATCGCCCAATCCACATGCTTTTCC...TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCAACTCCTCGAAGAGGTaGGAGGAGAGGTTGAGCATT +
Preference number: 5 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCNSSKR*EERLSI
Trigger: AATGCTCAACCTCTCCTCCAACCTCTTCGAGGAGTT...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp AATCACCTATCGCCTCGGTGGGCTGCTGTGTCTTTCCAGGTGCTGAAAGAGAAAGGCTGGATCAGTGGGTaGTCTTTGATCTTCCACAAA +
Preference number: 5 (lower is better)
Translates to: NHLSPRWAAVSFQVLKEKGWISG*SLIFHK
Trigger: TTTGTGGAAGATCAAAGACAACCCACTGATCCAGCC...TTTCTCTTTCAGCACCTGGAAAGACACAGCAGCCCACCGAGGCGATAGGTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp AGAAACCCTAACAAACTTGGAGGGCATTTGTTTGAGAGGCAAGGGACGCCTTGCAGTACTCTGTGTAAGTaGGGGAAGATCTCTCGGTGC +
Preference number: 5 (lower is better)
Translates to: RNPNKLGGHLFERQGTPCSTLCK*GKISRC
Trigger: GCACCGAGAGATCTTCCCCAACTTACACAGAGTACT...GCAAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTTGTTAGGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS GCA 90 bp AAAGGAAAGCTATATTCAATCTGCAACTGCTCAGCCACAAAAGACTaGCCAGCTAGGTTGGTCCCATTAATCCAGGCTTCTGCATGGGGC +
Preference number: 5 (lower is better)
Translates to: KGKLYSICNCSATKD*PARLVPLIQASAWG
Trigger: GCCCCATGCAGAAGCCTGGATTAATGGGACCAACCTAGCTGGGCAGTCTTTTGTGGCTGAGCAGTTGCAGATTGAATATAGCTTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS-3UTR CAA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTCTCGCGGTCTTCAGGTaGCCACTGTCCATCCCAGCC +
Preference number: 5 (lower is better)
Translates to: YCSICCLAQLKVEWRAICLAVFR*PLSIPA
Trigger: GGCTGGGATGGACAGTGGCAACCTGAAGACCGCGAG...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACGACTGCCCAGCTAGGTaGGTCCCATTAATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SSCLRLARSSQFYTFSINDCPAR*VPLIQA
Trigger: AGCCTGGATTAATGGGACCAACCTAGCTGGGCAGTC...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp GGTCACATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCATCACCAACATTCTTCTaGGAACAGGGGCTGATCACA +
Preference number: 5 (lower is better)
Translates to: GHMTLDHGNPFAKTHVTPSPTFF*EQGLIT
Trigger: TGTGATCAGCCCCTGTTCCAAGAAGAATGTTGGTGA...TGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCATGTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp GTGAGTGCAGAGGGTCTGCCAGGTGCAAAAGATGGTCCAGGTGTTCAGATGCTCTGTAGCATATGCTGTTaGGCCCAATTAAAAGTAGAA +
Preference number: 5 (lower is better)
Translates to: VSAEGLPGAKDGPGVQMLCSICC*AQLKVE
Trigger: TTCTACTTTTAATTGGGCCAAACAGCATATGCTACA...GAGCATCTGAACACCTGGACCATCTTTTGCACCTGGCAGACCCTCTGCACTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp ATGACCCTCGATCATGGTAACCCTTTTGCTAAGACACATGTGACACCAAGGTTTTTGGAGGGCATTTGTTaGAGAGGCAAGGGACGCCTT +
Preference number: 5 (lower is better)
Translates to: MTLDHGNPFAKTHVTPRFLEGIC*RGKGRL
Trigger: AAGGCGTCCCTTGCCTCTCAAACAAATGCCCTCCAA...AAACCTTGGTGTCACATGTGTCTTAGCAAAAGGGTTACCATGATCGAGGGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTCAAGGGGGTTATGGCTaGCCATGCGGTCCATATATT +
Preference number: 5 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCQGGYG*PCGPYI
Trigger: AATATATGGACCGCATGGCAAGCCATAACCCCCTTG...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTATCAGTGGGTTGTCTTaGATCTTCCACAAACCCACC +
Preference number: 5 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCISGLS*IFHKPT
Trigger: GGTGGGTTTGTGGAAGATCAAAGACAACCCACTGAT...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACGAGGCAAGGGACGCCTaGCTTAGAAAACATTCCTCT +
Preference number: 5 (lower is better)
Translates to: SSCLRLARSSQFYTFSINEARDA*LRKHSS
Trigger: AGAGGAATGTTTTCTAAGCAAGGCGTCCCTTGCCTC...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTCCCTGCAAGCACGCGTaGTCACTCAAGTTCACAGAA +
Preference number: 5 (lower is better)
Translates to: YCSICCLAQLKVEWRAICPCKHA*SLKFTE
Trigger: TTCTGTGAACTTGAGTGACAACGCGTGCTTGCAGGG...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTAGCACTAATAACACGTaGGAAGAGCAAAGGATTTCC +
Preference number: 5 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCSTNNT*EEQRIS
Trigger: GGAAATCCTTTGCTCTTCCAACGTGTTATTAGTGCT...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp GTTGGAAGAGCAAAGGATTTCCCACCAGCGTGCCAGATGATTTATATAGGCAGGAAACATGTTGAGACTTaGTATACTGTAGCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: VGRAKDFPPACQMIYIGRKHVET*YTVAFQ
Trigger: TTGGAAGGCTACAGTATACAAAGTCTCAACATGTTT...CCTGCCTATATAAATCATCTGGCACGCTGGTGGGAAATCCTTTGCTCTTCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACTTCCAGGAAGTGGTTTaGATACCACAAGTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: SSCLRLARSSQFYTFSINFQEVV*IPQVAG
Trigger: TCCTGCAACTTGTGGTATCAAAACCACTTCCTGGAA...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp CGAGAAGCAGTCAGTTTTATACATTTTCGATCAACCCACGGAGGAGGCAAATGTTATTTTGGCAGTGCTTaGACAATTCCAGGAAGTGGT +
Preference number: 5 (lower is better)
Translates to: REAVSFIHFRSTHGGGKCYFGSA*TIPGSG
Trigger: ACCACTTCCTGGAATTGTCAAAGCACTGCCAAAATA...ACATTTGCCTCCTCCGTGGGTTGATCGAAAATGTATAAAACTGACTGCTTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTGAAATCAGCCCCATCTaGGCACAGTTCTCATGCAGA +
Preference number: 5 (lower is better)
Translates to: YCSICCLAQLKVEWRAICEISPI*AQFSCR
Trigger: TCTGCATGAGAACTGTGCCAAGATGGGGCTGATTTC...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTAAACTTGGAGGGCATTaGTTTGAGAGGCAAGGGACG +
Preference number: 5 (lower is better)
Translates to: YCSICCLAQLKVEWRAICKLGGH*FERQGT
Trigger: CGTCCCTTGCCTCTCAAACAAATGCCCTCCAAGTTT...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp TCTTCTTGTCTGAGGCTGGCGAGAAGCAGTCAGTTTTATACATTTTCGATCAACAGAATGGAGAGCAATTaGTTTGGTTGGCTTTTTAAG +
Preference number: 5 (lower is better)
Translates to: SSCLRLARSSQFYTFSINRMESN*FGWLFK
Trigger: CTTAAAAAGCCAACCAAACAAATTGCTCTCCATTCT...GTTGATCGAAAATGTATAAAACTGACTGCTTCTCGCCAGCCTCAGACAAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS-3UTR CAA 90 bp TACTGTAGCATATGCTGTTTGGCCCAATTAAAAGTAGAATGGAGAGCAATTTGTCAGGTTGTAAAACATTaGCTCCATGTTCTCGTCCAT +
Preference number: 5 (lower is better)
Translates to: YCSICCLAQLKVEWRAICQVVKH*LHVLVH
Trigger: ATGGACGAGAACATGGAGCAAATGTTTTACAACCTG...ACAAATTGCTCTCCATTCTACTTTTAATTGGGCCAAACAGCATATGCTACAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS GCA 72 bp GACGCCGAGCGCGTGGAGAGCAGCTTGCATTCTCCCTaGGGCCGGGCCATGGGCGCGCCGGGCAGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: DAERVESSLHSP*GRAMGAPGSRA
Trigger: GGCCCTGCTGCCCGGCGCGCCCATGGCCCGGCCGCAGGGAGAATGCAAGCTGCTCTCCACGCGCTCGGCGTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS GCA 72 bp GGGCGGCGTCCCGCCACAGCCTCGCGGTCTTCAGGTTaGCACTGTCCATCCCAGCCATGGCGGGGCCCCGGG +
Preference number: 6 (lower is better)
Translates to: GRRPATASRSSG*HCPSQPWRGPG
Trigger: CCCGGGGCCCCGCCATGGCTGGGATGGACAGTGGCAACCTGAAGACCGCGAGGCTGTGGCGGGACGCCGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS CAA 72 bp CAGGCCCCGGCGGCGGTAAGCGTGAGCTGGCGCAGGTaGCTCCGCAGCTTCCTGGCACGCAGGGCGGCGTCC +
Preference number: 6 (lower is better)
Translates to: QAPAAVSVSWRR*LRSFLARRAAS
Trigger: GGACGCCGCCCTGCGTGCCAGGAAGCTGCGGAGCAACCTGCGCCAGCTCACGCTTACCGCCGCCGGGGCCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CAA 90 bp CTGGCACGCAGGGCGGCGTCCCGCCACAGCCTCGCGGTCTTCAGGTaGCCACTGTCCATCCCAGCCATGGCGGGGCCCCGGGCCGACAGC +
Preference number: 6 (lower is better)
Translates to: LARRAASRHSLAVFR*PLSIPAMAGPRADS
Trigger: GCTGTCGGCCCGGGGCCCCGCCATGGCTGGGATGGACAGTGGCAACCTGAAGACCGCGAGGCTGTGGCGGGACGCCGCCCTGCGTGCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS CAA 72 bp AGGGCGGCGTCCCGCCACAGCCTCGCGGTCTTCAGGTaGCCACTGTCCATCCCAGCCATGGCGGGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: RAASRHSLAVFR*PLSIPAMAGPR
Trigger: CCGGGGCCCCGCCATGGCTGGGATGGACAGTGGCAACCTGAAGACCGCGAGGCTGTGGCGGGACGCCGCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS GCA 72 bp CACGCTCTCCGCACAGGTCTGCGTGGGTGCCCACGATaGACACCACCGCGTGGGGCACTCTCGCCCCGACCC +
Preference number: 6 (lower is better)
Translates to: HALRTGLRGCPR*TPPRGALSPRP
Trigger: GGGTCGGGGCGAGAGTGCCCCACGCGGTGGTGTGCATCGTGGGCACCCACGCAGACCTGTGCGGAGAGCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp TCGCGGTCTTCAGGTTGCCACTGTCCATCCCAGCCATaGCGGGGCCCCGGGCCGACAGCCTCACGCGGACGC +
Preference number: 6 (lower is better)
Translates to: SRSSGCHCPSQP*RGPGPTASRGR
Trigger: GCGTCCGCGTGAGGCTGTCGGCCCGGGGCCCCGCCATGGCTGGGATGGACAGTGGCAACCTGAAGACCGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276282.7
CDS GCA 72 bp GGGGCTGGCAGAGCGCAGCTCGAAGTCCCGGGCCAGTaGCTCGTCCACCACCTTGGCCAAGCGGCTCAGTCC +
Preference number: 6 (lower is better)
Translates to: GAGRAQLEVPGQ*LVHHLGQAAQS
Trigger: GGACTGAGCCGCTTGGCCAAGGTGGTGGACGAGGCACTGGCCCGGGACTTCGAGCTGCGCTCTGCCAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp ACTGATGGAGCTGGGTGGCCCGGAGCAGTTCCTGGCTaGGGGTGGACCGCGCCATGGGCGGGGAGCTTTCCC +
Preference number: 6 (lower is better)
Translates to: TDGAGWPGAVPG*GWTAPWAGSFP
Trigger: GGGAAAGCTCCCCGCCCATGGCGCGGTCCACCCCCAGCCAGGAACTGCTCCGGGCCACCCAGCTCCATCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CAA 90 bp GCAGAGCGCAGCTCGAAGTCCCGGGCCAGTGCCTCGTCCACCACCTaGGCCAAGCGGCTCAGTCCCTCCGCGTCGTGCTTCTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: AERSSKSRASASSTT*AKRLSPSASCFSCR
Trigger: CCTGCAGGAGAAGCACGACGCGGAGGGACTGAGCCGCTTGGCCAAGGTGGTGGACGAGGCACTGGCCCGGGACTTCGAGCTGCGCTCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 72 bp CCCGGGAGGCATCGGCCGTCCAGCTGGTCACCTCGATaGCCTTGCTCACAGGGGGAGGTGACGGTGGGTAGC +
Preference number: 6 (lower is better)
Translates to: PGRHRPSSWSPR*PCSQGEVTVGS
Trigger: GCTACCCACCGTCACCTCCCCCTGTGAGCAAGGGCATCGAGGTGACCAGCTGGACGGCCGATGCCTCCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 72 bp CCTCCAGCTCACGCTCTCCGCACAGGTCTGCGTGGGTaGCCACGATGCACACCACCGCGTGGGGCACTCTCG +
Preference number: 6 (lower is better)
Translates to: PPAHALRTGLRG*PRCTPPRGALS
Trigger: CGAGAGTGCCCCACGCGGTGGTGTGCATCGTGGGCACCCACGCAGACCTGTGCGGAGAGCGTGAGCTGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 72 bp AGGGCACTCTGCAGTCGGTCCTCGGTCAGACCCGCCTaGAGGCCCAAGCGCGCCGAGTCCCACCAGCTTAGC +
Preference number: 6 (lower is better)
Translates to: RALCSRSSVRPA*RPKRAESHQLS
Trigger: GCTAAGCTGGTGGGACTCGGCGCGCTTGGGCCTGCAGGCGGGTCTGACCGAGGACCGACTGCAGAGTGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 72 bp TGCAGCAGCTGCCGGGGGAAGGCAGTGAGCTGGTTGTaGTCCACGTCCAGGGTGCGCAGGCGGGAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: CSSCRGKAVSWL*STSRVRRRERQ
Trigger: CTGCCTCTCCCGCCTGCGCACCCTGGACGTGGATCACAACCAGCTCACTGCCTTCCCCCGGCAGCTGCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp AGGTCTGCGTGGGTGCCCACGATGCACACCACCGCGTaGGGCACTCTCGCCCCGACCCGATGCAAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: RSAWVPTMHTTA*GTLAPTRCKKE
Trigger: CTCCTTCTTGCATCGGGTCGGGGCGAGAGTGCCCCACGCGGTGGTGTGCATCGTGGGCACCCACGCAGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp GCTCGAAGTCCCGGGCCAGTGCCTCGTCCACCACCTTaGCCAAGCGGCTCAGTCCCTCCGCGTCGTGCTTCT +
Preference number: 6 (lower is better)
Translates to: ARSPGPVPRPPP*PSGSVPPRRAS
Trigger: AGAAGCACGACGCGGAGGGACTGAGCCGCTTGGCCAAGGTGGTGGACGAGGCACTGGCCCGGGACTTCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CAA 72 bp AGCTCGAAGTCCCGGGCCAGTGCCTCGTCCACCACCTaGGCCAAGCGGCTCAGTCCCTCCGCGTCGTGCTTC +
Preference number: 6 (lower is better)
Translates to: SSKSRASASSTT*AKRLSPSASCF
Trigger: GAAGCACGACGCGGAGGGACTGAGCCGCTTGGCCAAGGTGGTGGACGAGGCACTGGCCCGGGACTTCGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 72 bp CACACCACCGCGTGGGGCACTCTCGCCCCGACCCGATaGAAGAAGGAGCCCACGGTGGTAGGAAAGTGGCGA +
Preference number: 6 (lower is better)
Translates to: HTTAWGTLAPTR*KKEPTVVGKWR
Trigger: TCGCCACTTTCCTACCACCGTGGGCTCCTTCTTGCATCGGGTCGGGGCGAGAGTGCCCCACGCGGTGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 72 bp ACCGCGCCATGGGCGGGGAGCTTTCCCCCTCCGCCTTaGCCTCTCCACTGGTCCCTAGGAGCAGCTTATGCA +
Preference number: 6 (lower is better)
Translates to: TAPWAGSFPPPP*PLHWSLGAAYA
Trigger: TGCATAAGCTGCTCCTAGGGACCAGTGGAGAGGGCAAGGCGGAGGGGGAAAGCTCCCCGCCCATGGCGCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp TTCTCCTCCAGCTCACGCTCTCCGCACAGGTCTGCGTaGGTGCCCACGATGCACACCACCGCGTGGGGCACT +
Preference number: 6 (lower is better)
Translates to: FSSSSRSPHRSA*VPTMHTTAWGT
Trigger: AGTGCCCCACGCGGTGGTGTGCATCGTGGGCACCCACGCAGACCTGTGCGGAGAGCGTGAGCTGGAGGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 72 bp GGGTACCTCCTCCAGGCCGTTGTTCCCCAGGTTCAGTaGCTCAATGTCCCCGAGGTTGGCCGGCAGCACGAG +
Preference number: 6 (lower is better)
Translates to: GYLLQAVVPQVQ*LNVPEVGRQHE
Trigger: CTCGTGCTGCCGGCCAACCTCGGGGACATTGAGGCACTGAACCTGGGGAACAACGGCCTGGAGGAGGTACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 72 bp ACATTTCTCCTCCAGCTCACGCTCTCCGCACAGGTCTaGGTGGGTGCCCACGATGCACACCACCGCGTGGGG +
Preference number: 6 (lower is better)
Translates to: TFLLQLTLSAQV*VGAHDAHHRVG
Trigger: CCCCACGCGGTGGTGTGCATCGTGGGCACCCACGCAGACCTGTGCGGAGAGCGTGAGCTGGAGGAGAAATGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp TCTTGTCCGAAACGCCATAGTAGGCTGCGTGGGGGCTaGCAGAGCGCAGCTCGAAGTCCCGGGCCAGTGCCT +
Preference number: 6 (lower is better)
Translates to: SCPKRHSRLRGG*QSAARSPGPVP
Trigger: AGGCACTGGCCCGGGACTTCGAGCTGCGCTCTGCCAGCCCCCACGCAGCCTACTATGGCGTTTCGGACAAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp GCAACAGAAAGCCCTCCACATACTGATGGAGCTGGGTaGCCCGGAGCAGTTCCTGGCTGGGGGTGGACCGCG +
Preference number: 6 (lower is better)
Translates to: ATESPPHTDGAG*PGAVPGWGWTA
Trigger: CGCGGTCCACCCCCAGCCAGGAACTGCTCCGGGCCACCCAGCTCCATCAGTATGTGGAGGGCTTTCTGTTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 72 bp TCTTTCCTGCAGCCTTATGCCCCATCAGGAGCAGCTTaGGCCGGGGCTGCACCGCCGGCTGGGAATGAGCCA +
Preference number: 6 (lower is better)
Translates to: SFLQPYAPSGAA*AGAAPPAGNEP
Trigger: TGGCTCATTCCCAGCCGGCGGTGCAGCCCCGGCTCAAGCTGCTCCTGATGGGGCATAAGGCTGCAGGAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 72 bp GCTGGTCACCTCGATGCCCTTGCTCACAGGGGGAGGTaGCGGTGGGTAGCACTTCTCCTTGTCCCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: AGHLDALAHRGR*RWVALLLVPSS
Trigger: GGAGGAGGGGACAAGGAGAAGTGCTACCCACCGTCACCTCCCCCTGTGAGCAAGGGCATCGAGGTGACCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 72 bp GCCGAGTCCCACCAGCTTAGCCACAGTCGCTGGGCCTaGGGTGGCTGGAAATGCAGTTCCTCCAGCACCTGC +
Preference number: 6 (lower is better)
Translates to: AESHQLSHSRWA*GGWKCSSSSTC
Trigger: GCAGGTGCTGGAGGAACTGCATTTCCAGCCACCTCAGGCCCAGCGACTGTGGCTAAGCTGGTGGGACTCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp ATCTTCCACAAACCCACCCGGGAGAGCTGGCCAAAGTaGTCGGGCAGCACCGCGATCTGGTTCCCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: IFHKPTRESWPK*SGSTAIWFPCS
Trigger: GCTGCAGGGGAACCAGATCGCGGTGCTGCCCGACCACTTTGGCCAGCTCTCCCGGGTGGGTTTGTGGAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CAA 90 bp GCGGCAGGGAACTCCTCGAAGAGGTTGGAGGAGAGGTTGAGCATTTaGAGCCGCTGCAGGCAGCTGAACTGGGCGGGCAGAGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: AAGNSSKRLEERLSI*SRCRQLNWAGRACS
Trigger: GCTGCAGGCTCTGCCCGCCCAGTTCAGCTGCCTGCAGCGGCTCAAAATGCTCAACCTCTCCTCCAACCTCTTCGAGGAGTTCCCTGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 72 bp AGGCAGTGGCGCAGCAAAGTCTTTCCTGCAGCCTTATaGCCCATCAGGAGCAGCTTGAGCCGGGGCTGCACC +
Preference number: 6 (lower is better)
Translates to: RQWRSKVFPAAL*PIRSSLSRGCT
Trigger: GGTGCAGCCCCGGCTCAAGCTGCTCCTGATGGGGCATAAGGCTGCAGGAAAGACTTTGCTGCGCCACTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp GCAGCACGAGCTCCTCCAGGCCGGTCAGCTCCACGATaGAGTCCGGCAGGTAGCGGATGCGGTTATTATCCA +
Preference number: 6 (lower is better)
Translates to: AARAPPGRSAPR*SPAGSGCGYYP
Trigger: TGGATAATAACCGCATCCGCTACCTGCCGGACTCCATCGTGGAGCTGACCGGCCTGGAGGAGCTCGTGCTGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp CCTGGGCATCCCTCCACTCTCTCCTCGGTGAGGCAGTaGCGCAGCAAAGTCTTTCCTGCAGCCTTATGCCCC +
Preference number: 6 (lower is better)
Translates to: PGHPSTLSSVRQ*RSKVFPAALCP
Trigger: GGGGCATAAGGCTGCAGGAAAGACTTTGCTGCGCCACTGCCTCACCGAGGAGAGAGTGGAGGGATGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp GCAACTGACAGCAACTTGTCCCGAAGGCGTCGTAAGTaGCGCGGGTCCCTGCAGCTAACAGGCAACACGGGG +
Preference number: 6 (lower is better)
Translates to: ATDSNLSRRRRK*RGSLQLTGNTG
Trigger: CCCCGTGTTGCCTGTTAGCTGCAGGGACCCGCGCCACTTACGACGCCTTCGGGACAAGTTGCTGTCAGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 72 bp AAGAGGTTGGAGGAGAGGTTGAGCATTTTGAGCCGCTaGAGGCAGCTGAACTGGGCGGGCAGAGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: KRLEERLSILSR*RQLNWAGRACS
Trigger: GCTGCAGGCTCTGCCCGCCCAGTTCAGCTGCCTGCAGCGGCTCAAAATGCTCAACCTCTCCTCCAACCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp CAAGGTGAGAAGCCGGCCCAGGCCCGAGATAAGGGATaGCACCGAGGTGAGCTGGTTGCGACTAAGGTAGAG +
Preference number: 6 (lower is better)
Translates to: QGEKPAQARDKG*HRGELVATKVE
Trigger: CTCTACCTTAGTCGCAACCAGCTCACCTCGGTGCCATCCCTTATCTCGGGCCTGGGCCGGCTTCTCACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CAA 72 bp GGGAAGATCTCTCGGTGCTCAGCAACTGACAGCAACTaGTCCCGAAGGCGTCGTAAGTGGCGCGGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: GKISRCSATDSN*SRRRRKWRGSL
Trigger: CAGGGACCCGCGCCACTTACGACGCCTTCGGGACAAGTTGCTGTCAGTTGCTGAGCACCGAGAGATCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 72 bp CCTCATAACTTTCATCCCCAGCTAAGTCATACACGATaGACCGCAGGCCCCGGGAGGCATCGGCCGTCCAGC +
Preference number: 6 (lower is better)
Translates to: PHNFHPQLSHTR*TAGPGRHRPSS
Trigger: GCTGGACGGCCGATGCCTCCCGGGGCCTGCGGTTCATCGTGTATGACTTAGCTGGGGATGAAAGTTATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 72 bp TCCGCGTCGTGCTTCTCCTGCAGGGCGATCTGGCGGTaGATGTCCAGACATTTCTCCTCCAGCTCACGCTCT +
Preference number: 6 (lower is better)
Translates to: SASCFSCRAIWR*MSRHFSSSSRS
Trigger: AGAGCGTGAGCTGGAGGAGAAATGTCTGGACATTCACCGCCAGATCGCCCTGCAGGAGAAGCACGACGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 72 bp CAGGCAACACGGGGGAGAGGATCTGCAGCCGGTGGTTaGGCAGGTATTGAAAATGGGCCTTGCGCCGTCGAA +
Preference number: 6 (lower is better)
Translates to: QATRGRGSAAGG*AGIENGPCAVE
Trigger: TTCGACGGCGCAAGGCCCATTTTCAATACCTGCTCAACCACCGGCTGCAGATCCTCTCCCCCGTGTTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 72 bp CGCTCGACAAATGGCTCTGACAGCTCTAGGCCTGAGTaGACACGTCTAAGGGCAAGGTCACCGCATGCCTCG +
Preference number: 6 (lower is better)
Translates to: RSTNGSDSSRPE*TRLRARSPHAS
Trigger: CGAGGCATGCGGTGACCTTGCCCTTAGACGTGTGCACTCAGGCCTAGAGCTGTCAGAGCCATTTGTCGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520091.1
CDS CAA 90 bp AGGCAACACGGGGGAGAGGATCTGCAGCCGGTGGTTGAGCAGGTATaGAAAATGGGCCTTGCGCCGTCGAAGGTTCTTGTCCGAAACGCC +
Preference number: 6 (lower is better)
Translates to: RQHGGEDLQPVVEQV*KMGLAPSKVLVRNA
Trigger: GGCGTTTCGGACAAGAACCTTCGACGGCGCAAGGCCCATTTTCAATACCTGCTCAACCACCGGCTGCAGATCCTCTCCCCCGTGTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 72 bp GGGGAGAGGATCTGCAGCCGGTGGTTGAGCAGGTATTaGAAATGGGCCTTGCGCCGTCGAAGGTTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: GERICSRWLSRY*KWALRRRRFLS
Trigger: GGACAAGAACCTTCGACGGCGCAAGGCCCATTTTCAATACCTGCTCAACCACCGGCTGCAGATCCTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 72 bp CAACATTTACTCGCTCGCTGCCGTTCTTGGGGCAAATaGTCTCTGCCACTCCTTCCGGCCTGGGCGACAGAG +
Preference number: 6 (lower is better)
Translates to: QHLLARCRSWGK*SLPLLPAWATE
Trigger: CTCTGTCGCCCAGGCCGGAAGGAGTGGCAGAGATCATTTGCCCCAAGAACGGCAGCGAGCGAGTAAATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp TTGTCTTTGATCTTCCACAAACCCACCCGGGAGAGCTaGCCAAAGTGGTCGGGCAGCACCGCGATCTGGTTC +
Preference number: 6 (lower is better)
Translates to: LSLIFHKPTRES*PKWSGSTAIWF
Trigger: GAACCAGATCGCGGTGCTGCCCGACCACTTTGGCCAGCTCTCCCGGGTGGGTTTGTGGAAGATCAAAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CAA 72 bp GGGGGAGAGGATCTGCAGCCGGTGGTTGAGCAGGTATaGAAAATGGGCCTTGCGCCGTCGAAGGTTCTTGTC +
Preference number: 6 (lower is better)
Translates to: GGEDLQPVVEQV*KMGLAPSKVLV
Trigger: GACAAGAACCTTCGACGGCGCAAGGCCCATTTTCAATACCTGCTCAACCACCGGCTGCAGATCCTCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CAA 90 bp TGTAAGTTGGGGAAGATCTCTCGGTGCTCAGCAACTGACAGCAACTaGTCCCGAAGGCGTCGTAAGTGGCGCGGGTCCCTGCAGCTAACA +
Preference number: 6 (lower is better)
Translates to: CKLGKISRCSATDSN*SRRRRKWRGSLQLT
Trigger: TGTTAGCTGCAGGGACCCGCGCCACTTACGACGCCTTCGGGACAAGTTGCTGTCAGTTGCTGAGCACCGAGAGATCTTCCCCAACTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp CTTCTTGGAACAGGGGCTGATCACAGTCGGCGTGGGTaGGTAAACCAAGGCAACATTTACTCGCTCGCTGCC +
Preference number: 6 (lower is better)
Translates to: LLGTGADHSRRG*VNQGNIYSLAA
Trigger: GGCAGCGAGCGAGTAAATGTTGCCTTGGTTTACCCACCCACGCCGACTGTGATCAGCCCCTGTTCCAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276282.7
ENST00000520715.5
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp GCACCTGCCAGGATCGAGGCAGTACTCTGTGTAAGTTaGGGAAGATCTCTCGGTGCTCAGCAACTGACAGCA +
Preference number: 6 (lower is better)
Translates to: APARIEAVLCVS*GRSLGAQQLTA
Trigger: TGCTGTCAGTTGCTGAGCACCGAGAGATCTTCCCCAACTTACACAGAGTACTGCCTCGATCCTGGCAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp AAGACATTGAGGATGTCGATGAGGCGGGTGAGGTTGTaGAAGACGTGCTCCTTGAGAGCCGGACTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: KTLRMSMRRVRL*KTCSLRAGLSS
Trigger: TGAGGACAGTCCGGCTCTCAAGGAGCACGTCTTCCACAACCTCACCCGCCTCATCGACATCCTCAATGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp ATACTTGGAACAGGGGCTGATCACAGTCGGCGTGGGTaGGTAAACCAAGGCAACATTTACTCGCTCGCTGCC +
Preference number: 6 (lower is better)
Translates to: ILGTGADHSRRG*VNQGNIYSLAA
Trigger: GGCAGCGAGCGAGTAAATGTTGCCTTGGTTTACCCACCCACGCCGACTGTGATCAGCCCCTGTTCCAAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520091.1
ENST00000521881.5
CDS CAA 72 bp AGCACCTGCCAGGATCGAGGCAGTACTCTGTGTAAGTaGGGGAAGATCTCTCGGTGCTCAGCAACTGACAGC +
Preference number: 6 (lower is better)
Translates to: STCQDRGSTLCK*GKISRCSATDS
Trigger: GCTGTCAGTTGCTGAGCACCGAGAGATCTTCCCCAACTTACACAGAGTACTGCCTCGATCCTGGCAGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CAA 72 bp AAGAAGACATTGAGGATGTCGATGAGGCGGGTGAGGTaGTGGAAGACGTGCTCCTTGAGAGCCGGACTGTCC +
Preference number: 6 (lower is better)
Translates to: KKTLRMSMRRVR*WKTCSLRAGLS
Trigger: GGACAGTCCGGCTCTCAAGGAGCACGTCTTCCACAACCTCACCCGCCTCATCGACATCCTCAATGTCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CAA 90 bp AGTTCCTCCAGCACCTGCCAGGATCGAGGCAGTACTCTGTGTAAGTaGGGGAAGATCTCTCGGTGCTCAGCAACTGACAGCAACTTGTCC +
Preference number: 6 (lower is better)
Translates to: SSSSTCQDRGSTLCK*GKISRCSATDSNLS
Trigger: GGACAAGTTGCTGTCAGTTGCTGAGCACCGAGAGATCTTCCCCAACTTACACAGAGTACTGCCTCGATCCTGGCAGGTGCTGGAGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CAA 90 bp AGCAGCTTATGCAGCAGCAAAGAGGGATCCCTCTGGAAGAAGACATaGAGGATGTCGATGAGGCGGGTGAGGTTGTGGAAGACGTGCTCC +
Preference number: 6 (lower is better)
Translates to: SSLCSSKEGSLWKKT*RMSMRRVRLWKTCS
Trigger: GGAGCACGTCTTCCACAACCTCACCCGCCTCATCGACATCCTCAATGTCTTCTTCCAGAGGGATCCCTCTTTGCTGCTGCATAAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 72 bp GGCAGTACTCTGTGTAAGTTGGGGAAGATCTCTCGGTaGTCAGCAACTGACAGCAACTTGTCCCGAAGGCGT +
Preference number: 6 (lower is better)
Translates to: GSTLCKLGKISR*SATDSNLSRRR
Trigger: ACGCCTTCGGGACAAGTTGCTGTCAGTTGCTGAGCACCGAGAGATCTTCCCCAACTTACACAGAGTACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp GGCTTCTGCATGGGGCACCTCGTTCTGCACATAGCATaGGAACTTGTACCAAGCTGTGGACCCATTCAAAGG +
Preference number: 6 (lower is better)
Translates to: GFCMGHLVLHIA*ELVPSCGPIQR
Trigger: CCTTTGAATGGGTCCACAGCTTGGTACAAGTTCCCATGCTATGTGCAGAACGAGGTGCCCCATGCAGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CAA 72 bp GGCGACAGAGCGAGACTCCCTGGAAAAGCATGTGGATaGGGCGATCCTCTCTTAAGGCACTTAGAACAGAGA +
Preference number: 6 (lower is better)
Translates to: GDRARLPGKACG*GDPLLRHLEQR
Trigger: TCTCTGTTCTAAGTGCCTTAAGAGAGGATCGCCCAATCCACATGCTTTTCCAGGGAGTCTCGCTCTGTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644336.1
ENST00000644614.1
CDS CAA 90 bp TATTCAATCTGCAACTGCTCAGCCACAAAAGACTGCCCAGCTAGGTaGGTCCCATTAATCCAGGCTTCTGCATGGGGCACCTCGTTCTGC +
Preference number: 6 (lower is better)
Translates to: YSICNCSATKDCPAR*VPLIQASAWGTSFC
Trigger: GCAGAACGAGGTGCCCCATGCAGAAGCCTGGATTAATGGGACCAACCTAGCTGGGCAGTCTTTTGTGGCTGAGCAGTTGCAGATTGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp GACATGAGGCTTAAGCAGCAACCGAATGACATGAGCTaGCAAGAGCCCATGCAACAGAAAGCCCTCCACATA +
Preference number: 6 (lower is better)
Translates to: DMRLKQQPNDMS*QEPMQQKALHI
Trigger: TATGTGGAGGGCTTTCTGTTGCATGGGCTCTTGCCAGCTCATGTCATTCGGTTGCTGCTTAAGCCTCATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp GCTTGCCATGCGGTCCATATATTTGGTAATGATGCATaGCTAGCAATGGACAGGGTGTCTGGCTGCAGGACT +
Preference number: 6 (lower is better)
Translates to: ACHAVHIFGNDA*LAMDRVSGCRT
Trigger: AGTCCTGCAGCCAGACACCCTGTCCATTGCTAGCCATGCATCATTACCAAATATATGGACCGCATGGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS TCA 72 bp TTTCCAAGAAAGTATGAAGATACTTGGAACAGGGGCTaGTCACAGTCGGCGTGGGTGGGTAAACCAAGGCAA +
Preference number: 6 (lower is better)
Translates to: FPRKYEDTWNRG*SQSAWVGKPRQ
Trigger: TTGCCTTGGTTTACCCACCCACGCCGACTGTGATCAGCCCCTGTTCCAAGTATCTTCATACTTTCTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520091.1
ENST00000521881.5
CDS GCA 72 bp AGGACATTCAGTTCCTCCACCAAGGGGGTTATGGCTTaGCATGCGGTCCATATATTTGGTAATGATGCATGG +
Preference number: 6 (lower is better)
Translates to: RTFSSSTKGVMA*HAVHIFGNDAW
Trigger: CCATGCATCATTACCAAATATATGGACCGCATGGCAAGCCATAACCCCCTTGGTGGAGGAACTGAATGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS GCA 72 bp CTATATTCAATCTGCAACTGCTCAGCCACAAAAGACTaGCCAGCTAGGTTGGTCCCATTAATCCAGGCTTCT +
Preference number: 6 (lower is better)
Translates to: LYSICNCSATKD*PARLVPLIQAS
Trigger: AGAAGCCTGGATTAATGGGACCAACCTAGCTGGGCAGTCTTTTGTGGCTGAGCAGTTGCAGATTGAATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1
CDS CCA 72 bp GAAGTAGGACATTCAGTTCCTCCACCAAGGGGGTTATaGCTTGCCATGCGGTCCATATATTTGGTAATGATG +
Preference number: 6 (lower is better)
Translates to: EVGHSVPPPRGL*LAMRSIYLVMM
Trigger: CATCATTACCAAATATATGGACCGCATGGCAAGCCATAACCCCCTTGGTGGAGGAACTGAATGTCCTACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276282.7
ENST00000644336.1
ENST00000644614.1