RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MFAP5 (Homo sapiens)

Ensembl gene IDs: ENSG00000197614

Ensembl transcript IDs: ENST00000359478.7, ENST00000396549.6, ENST00000433590.6, ENST00000534833.5, ENST00000535336.5, ENST00000535411.5, ENST00000537009.5, ENST00000537128.1, ENST00000538107.5, ENST00000538694.5, ENST00000540087.5, ENST00000543369.5, ENST00000543467.5, ENST00000544211.5, ENST00000544889.1

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATTTATTTCTCACAGTTCTGGAGGCTGAGAAGTCCAAGAACATGGTaGCATCATCTGATGAGAGTCATCCCATGGTGGAAGGACAGCAAG +
Preference number: 1 (lower is better)
Translates to: IYFSQFWRLRSPRTW*HHLMRVIPWWKDSK
Trigger: CTTGCTGTCCTTCCACCATGGGATGACTCTCATCAGATGATGGCACCATGTTCTTGGACTTCTCAGCCTCCAGAACTGTGAGAAATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543467.5
3UTR CCA 90 bp GAAATTTATTTCTCACAGTTCTGGAGGCTGAGAAGTCCAAGAACATaGTGCCATCATCTGATGAGAGTCATCCCATGGTGGAAGGACAGC +
Preference number: 1 (lower is better)
Translates to: EIYFSQFWRLRSPRT*CHHLMRVIPWWKDS
Trigger: GCTGTCCTTCCACCATGGGATGACTCTCATCAGATGATGGCACCATGTTCTTGGACTTCTCAGCCTCCAGAACTGTGAGAAATAAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543467.5
3UTR TCA 90 bp TGGTGGTGGGTTCATCCCGGTACTACCCATAAACGAATCAGTAAATaGGACTTAGTTTCCAACCTTACTTCCCGACTAGACAACTGCATG +
Preference number: 1 (lower is better)
Translates to: WWWVHPGTTHKRISK*DLVSNLTSRLDNCM
Trigger: CATGCAGTTGTCTAGTCGGGAAGTAAGGTTGGAAACTAAGTCTCATTTACTGATTCGTTTATGGGTAGTACCGGGATGAACCCACCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR CCA 90 bp TGCATGAAAAATTGGATAGCGAATTATGAGTCCAAGTTCTATAGCTaGCATAGTCCTCATGCTTTAGCCCCAGCCTCTGAGCTTAGCAGA +
Preference number: 1 (lower is better)
Translates to: CMKNWIANYESKFYS*HSPHALAPASELSR
Trigger: TCTGCTAAGCTCAGAGGCTGGGGCTAAAGCATGAGGACTATGCCAGCTATAGAACTTGGACTCATAATTCGCTATCCAATTTTTCATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR CCA 90 bp CAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATaGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTT +
Preference number: 1 (lower is better)
Translates to: QKDWFKKYCLRVSCQ*LEKKEILLPLTHTF
Trigger: AAATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
3UTR TCA 90 bp GGCTACGTGGTTACTGCTAGAGCCAGGATAAGAATGTGGGTTGTCTaGATATTGTGTTTCTTTCACTCTTTCGTATTAACTATTAGGCAA +
Preference number: 1 (lower is better)
Translates to: GYVVTARARIRMWVV*ILCFFHSFVLTIRQ
Trigger: TTGCCTAATAGTTAATACGAAAGAGTGAAAGAAACACAATATTCAGACAACCCACATTCTTATCCTGGCTCTAGCAGTAACCACGTAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR-3UTR CCA 90 bp AGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATAGGGTTAGCTGTCAATaGTTGGAGAAGAAGGAGATC +
Preference number: 2 (lower is better)
Translates to: RVSCQWLEKKEILLPLTHRVSCQ*LEKKEI
Trigger: GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT...ATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
3UTR-3UTR TCA 90 bp ACTTACCATGATGTGTCTTATAAGGAAGACTTGCCAGGCAAATTTTCGGGCAAGGTAAAGAGGAACACGTaGATGATGGGGAGTTGGTCT +
Preference number: 2 (lower is better)
Translates to: TYHDVSYKEDLPGKFSGKVKRNT*MMGSWS
Trigger: AGACCAACTCCCCATCATTCACGTGTTCCTCTTTAC...CTTGCCCGAAAATTTGCCTGGCAAGTCTTCCTTATAAGACACATCATGGTAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR-3UTR GCA 90 bp TGTGGTGGTGGGTTCATCCCGGTACTACCCATAAACGAATCAGTAAATGAGACTCTTATAAGGAAGACTTaGCAGGCAAATTTTCGGGCA +
Preference number: 2 (lower is better)
Translates to: CGGGFIPVLPINESVNETLIRKT*QANFRA
Trigger: TGCCCGAAAATTTGCCTGGCAAGTCTTCCTTATAAG...AGTCTCATTTACTGATTCGTTTATGGGTAGTACCGGGATGAACCCACCACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR-3UTR CCA 90 bp AAAGAAATTTATTTCTCACAGTTCTGGAGGCTGAGAAGTCCAAGAACATGGTGCAGAGTCATCCCATGGTaGAAGGACAGCAAGTGCAAG +
Preference number: 2 (lower is better)
Translates to: KEIYFSQFWRLRSPRTWCRVIPW*KDSKCK
Trigger: CTTGCACTTGCTGTCCTTCCACCATGGGATGACTCT...GCACCATGTTCTTGGACTTCTCAGCCTCCAGAACTGTGAGAAATAAATTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543467.5
3UTR-3UTR CCA 90 bp AAAGAAATTTATTTCTCACAGTTCTGGAGGCTGAGAAGTCCAAGAACATGGTGCATGAGAGTCATCCCATaGTGGAAGGACAGCAAGTGC +
Preference number: 2 (lower is better)
Translates to: KEIYFSQFWRLRSPRTWCMRVIP*WKDSKC
Trigger: GCACTTGCTGTCCTTCCACCATGGGATGACTCTCAT...GCACCATGTTCTTGGACTTCTCAGCCTCCAGAACTGTGAGAAATAAATTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543467.5
3UTR CAA 90 bp ATCAGGATATCCAAAAGCCACTTGCACAATAATTCGACCGTGCACTaGTTAAGTTGTGAAGATGAACGAAGTAGCAACTCAAGGAAACGT +
Preference number: 2 (lower is better)
Translates to: IRISKSHLHNNSTVH*LSCEDERSSNSRKR
Trigger: ACGTTTCCTTGAGTTGCTACTTCGTTCATCTTCACAACTTAACAAGTGCACGGTCGAATTATTGTGCAAGTGGCTTTTGGATATCCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR-3UTR GCA 90 bp TCCAAAAGCCACTTGCACAATAATTCGACCGTGCACTTGTTAAGTTGTGAAGATTCCCGACTAGACAACTaGATGAAAAATTGGATAGCG +
Preference number: 2 (lower is better)
Translates to: SKSHLHNNSTVHLLSCEDSRLDN*MKNWIA
Trigger: CGCTATCCAATTTTTCATGCAGTTGTCTAGTCGGGA...ATCTTCACAACTTAACAAGTGCACGGTCGAATTATTGTGCAAGTGGCTTTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR-3UTR CCA 90 bp ACATTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTAGCTGTCAATGGTTaGAGAAGAAGGAGATCCTCC +
Preference number: 2 (lower is better)
Translates to: TLQKDWFKKYCLRVSCQWLAVNG*RRRRSS
Trigger: GGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA...CCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
3UTR-3UTR CCA 90 bp AACGAAGTAGCAACTCAAGGAAACGTCAACCAATGGTATGATTTCACATTAAGTTTAGCTGTCAATGGTTaGAGAAGAAGGAGATCCTCC +
Preference number: 2 (lower is better)
Translates to: NEVATQGNVNQWYDFTLSLAVNG*RRRRSS
Trigger: GGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA...ACTTAATGTGAAATCATACCATTGGTTGACGTTTCCTTGAGTTGCTACTTCGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR-3UTR CCA 90 bp ATTCTATGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATTTAGCTGTCAATGGTTaGAGAAGAAGGAGATCCTCC +
Preference number: 2 (lower is better)
Translates to: ILWLAQIDKDSFFNPKIYLAVNG*RRRRSS
Trigger: GGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA...ATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCATAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
3UTR-3UTR CCA 90 bp ATTCTATGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATAGGGTTAGCTGTCAATaGTTGGAGAAGAAGGAGATC +
Preference number: 2 (lower is better)
Translates to: ILWLAQIDKDSFFNPKIYRVSCQ*LEKKEI
Trigger: GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT...ATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCATAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
3UTR GCA 72 bp TCACAGTTCTGGAGGCTGAGAAGTCCAAGAACATGGTaGCATCATCTGATGAGAGTCATCCCATGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: SQFWRLRSPRTW*HHLMRVIPWWK
Trigger: CTTCCACCATGGGATGACTCTCATCAGATGATGGCACCATGTTCTTGGACTTCTCAGCCTCCAGAACTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543467.5
3UTR-3UTR CAA 90 bp AGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATGTTAGCTGTCAATGGTaGGAGAAGAAGGAGATCCTC +
Preference number: 3 (lower is better)
Translates to: RVSCQWLEKKEILLPLTHVSCQW*EKKEIL
Trigger: GAGGATCTCCTTCTTCTCCAACCATTGACAGCTAAC...ATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
3UTR-3UTR CAA 90 bp AGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATGGTAAAAGCTGGACATaGCAAAAGGATTGGTTTAAG +
Preference number: 3 (lower is better)
Translates to: RVSCQWLEKKEILLPLTHGKSWT*QKDWFK
Trigger: CTTAAACCAATCCTTTTGCAATGTCCAGCTTTTACC...ATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
3UTR CCA 72 bp AATTGGATAGCGAATTATGAGTCCAAGTTCTATAGCTaGCATAGTCCTCATGCTTTAGCCCCAGCCTCTGAG +
Preference number: 3 (lower is better)
Translates to: NWIANYESKFYS*HSPHALAPASE
Trigger: CTCAGAGGCTGGGGCTAAAGCATGAGGACTATGCCAGCTATAGAACTTGGACTCATAATTCGCTATCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR CCA 72 bp TGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATaGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACC +
Preference number: 3 (lower is better)
Translates to: WFKKYCLRVSCQ*LEKKEILLPLT
Trigger: GGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
3UTR TCA 72 bp GTTCATCCCGGTACTACCCATAAACGAATCAGTAAATaGGACTTAGTTTCCAACCTTACTTCCCGACTAGAC +
Preference number: 3 (lower is better)
Translates to: VHPGTTHKRISK*DLVSNLTSRLD
Trigger: GTCTAGTCGGGAAGTAAGGTTGGAAACTAAGTCTCATTTACTGATTCGTTTATGGGTAGTACCGGGATGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR GCA 72 bp AACCAATGGTATGATTTCACATTAAGTTGTCTAATTTaGTTTGTGGTGGTGGGTTCATCCCGGTACTACCCA +
Preference number: 3 (lower is better)
Translates to: NQWYDFTLSCLI*FVVVGSSRYYP
Trigger: TGGGTAGTACCGGGATGAACCCACCACCACAAAGCAAATTAGACAACTTAATGTGAAATCATACCATTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR-3UTR CAA 90 bp AGACTTGCCAGGCAAATTTTCGGGCAAGCCAGCAAAATAGTTAAAGTAAGAGTAGGTAAAAGCTGGACATaGCAAAAGGATTGGTTTAAG +
Preference number: 3 (lower is better)
Translates to: RLARQIFGQASKIVKVRVGKSWT*QKDWFK
Trigger: CTTAAACCAATCCTTTTGCAATGTCCAGCTTTTACC...TACTCTTACTTTAACTATTTTGCTGGCTTGCCCGAAAATTTGCCTGGCAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR GCA 72 bp GACTTAGTTTCCAACCTTACTTCCCGACTAGACAACTaGATGAAAAATTGGATAGCGAATTATGAGTCCAAG +
Preference number: 3 (lower is better)
Translates to: DLVSNLTSRLDN*MKNWIANYESK
Trigger: CTTGGACTCATAATTCGCTATCCAATTTTTCATGCAGTTGTCTAGTCGGGAAGTAAGGTTGGAAACTAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR CCA 72 bp GGAATTGAAATGCTGTCTGATGGAAATGTTGCAATGTaGAGTAGGAGGGTCAAGTTCGTGAAGATATTCTTA +
Preference number: 3 (lower is better)
Translates to: GIEMLSDGNVAM*SRRVKFVKIFL
Trigger: TAAGAATATCTTCACGAACTTGACCCTCCTACTCCACATTGCAACATTTCCATCAGACAGCATTTCAATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359478.7
3UTR TCA 72 bp GTTACTGCTAGAGCCAGGATAAGAATGTGGGTTGTCTaGATATTGTGTTTCTTTCACTCTTTCGTATTAACT +
Preference number: 3 (lower is better)
Translates to: VTARARIRMWVV*ILCFFHSFVLT
Trigger: AGTTAATACGAAAGAGTGAAAGAAACACAATATTCAGACAACCCACATTCTTATCCTGGCTCTAGCAGTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR TCA 72 bp CTACCCTCACCTAGGATAAAGCAGATATGGTTGCTATaGATTAGACTGTATCTAAGCTTCAAGAAATATGAA +
Preference number: 3 (lower is better)
Translates to: LPSPRIKQIWLL*IRLYLSFKKYE
Trigger: TTCATATTTCTTGAAGCTTAGATACAGTCTAATTCATAGCAACCATATCTGCTTTATCCTAGGTGAGGGTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR TCA 72 bp GGTCCTTATATATTGCTAGTAGGATTGTATAATTCTTaGCTGTGTTGCAGAATCTTACAGGACTACAAAACT +
Preference number: 3 (lower is better)
Translates to: GPYILLVGLYNS*LCCRILQDYKT
Trigger: AGTTTTGTAGTCCTGTAAGATTCTGCAACACAGTCAAGAATTATACAATCCTACTAGCAATATATAAGGACC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp ATTGGAGCGACGGAGTCTCCTAGGGGGCAGACCAGCCATCTGACGGCAAAGCTCACATCGTCTCCTCGTTaGCTATTGACCCCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: IGATESPRGQTSHLTAKLTSSPR*LLTPRG
Trigger: ACCCCTGGGGGTCAATAGTCAACGAGGAGACGATGT...GAGCTTTGCCGTCAGATGGCTGGTCTGCCCCCTAGGAGACTCCGTCGCTCCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000537009.5
ENST00000544211.5
CDS-3UTR TCA 90 bp GGGGCAGACCAGCCATCTGACGGCAAAGCTCATCTAGCACAGGTGAGCAGTAAAGGCAGACCAGCCATCTaGCGGCAAAGCTCATCTAGC +
Preference number: 4 (lower is better)
Translates to: GADQPSDGKAHLAQVSSKGRPAI*RQSSSS
Trigger: GCTAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCC...TTTACTGCTCACCTGTGCTAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537009.5
ENST00000544211.5
CDS-3UTR TCA 90 bp GGGGCAGACCAGCCATCTGACGGCAAAGCTCATCTAGCACAGGTGAGCAGTAAACTCCTCGTTGACTATTaGCCCCCAGGGGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: GADQPSDGKAHLAQVSSKLLVDY*PPGVSS
Trigger: ACTGGATACCCCTGGGGGTCAATAGTCAACGAGGAG...TTTACTGCTCACCTGTGCTAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537009.5
ENST00000544211.5
CDS-3UTR TCA 90 bp GGGGCAGACCAGCCATCTGACGGCAAAGCTCATCTAGCACAGGTGAGCAGTAAAGTTTCTGGAGTCGCTTaGGTCACATCGTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: GADQPSDGKAHLAQVSSKVSGVA*VTSSPR
Trigger: ACGAGGAGACGATGTGACTCAAGCGACTCCAGAAAC...TTTACTGCTCACCTGTGCTAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537009.5
ENST00000544211.5
CDS-3UTR GCA 90 bp ATTGGAGCGACGGAGTCTCCTAGGGGGCAGACCAGCCATCTGACGGCAAAGCTCTTGTCTATGGTGTTCTaGTCTTTCCACCGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: IGATESPRGQTSHLTAKLLSMVF*SFHRVL
Trigger: AAGGACTCGGTGGAAAGAGCAGAACACCATAGACAA...GAGCTTTGCCGTCAGATGGCTGGTCTGCCCCCTAGGAGACTCCGTCGCTCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537009.5
ENST00000544211.5
CDS-3UTR CCA 90 bp GGAGCGACGGAGTCTCCTAGGGGGCAGACCAGCCATCTGACGGCAAAGCTCATCTTCTGTGAATGTTTCTaGAGTCGCTTGAGTCACATC +
Preference number: 4 (lower is better)
Translates to: GATESPRGQTSHLTAKLIFCECF*SRLSHI
Trigger: GATGTGACTCAAGCGACTCCAGAAACATTCACAGAA...GATGAGCTTTGCCGTCAGATGGCTGGTCTGCCCCCTAGGAGACTCCGTCGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537009.5
ENST00000544211.5
CDS-3UTR TCA 90 bp GGGGCAGACCAGCCATCTGACGGCAAAGCTCATCTAGCACAGGTGAGCAGTAAAGAGTCCTTTGGCTGCTaGATGTGTCTCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GADQPSDGKAHLAQVSSKESFGC*MCLSPL
Trigger: AAGAGGAGAGAGACACATTCAGCAGCCAAAGGACTC...TTTACTGCTCACCTGTGCTAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537009.5
ENST00000544211.5
CDS-3UTR TCA 90 bp CTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCACATCGTCTCCTCGTTaGCTATTGACCCCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: LRVSCQWLEKKEILLPLTTSSPR*LLTPRG
Trigger: ACCCCTGGGGGTCAATAGTCAACGAGGAGACGATGT...GGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR CCA 90 bp GGGGCAGACCAGCCATCTGACGGCAAAGCTCATCTAGCACAGGTGAGCAGTAAAAGGCCAAGTCATCTGTaGAAGGTGCAATATCAGCCA +
Preference number: 4 (lower is better)
Translates to: GADQPSDGKAHLAQVSSKRPSHL*KVQYQP
Trigger: TGGCTGATATTGCACCTTCCACAGATGACTTGGCCT...TTTACTGCTCACCTGTGCTAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537009.5
CDS-3UTR TCA 90 bp TGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCGGCTGGCGAATAAGATaGACAGAGCCACTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: CLRVSCQWLEKKEILLPLGWRIR*TEPLPG
Trigger: TCCAGGGAGTGGCTCTGTTCATCTTATTCGCCAGCC...GAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
CDS-3UTR TCA 90 bp CTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCGTTTCTGGAGTCGCTTaGGTCACATCGTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LRVSCQWLEKKEILLPLTVSGVA*VTSSPR
Trigger: ACGAGGAGACGATGTGACTCAAGCGACTCCAGAAAC...GGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR TCA 90 bp TTCACAGGGAGGAAGTCGGAAGTAATTGGAGCGACGGAGTCTCCTAGGGGGCAGTACGTCGTAAACTGGTaGAGCATAACTGATGAATGC +
Preference number: 4 (lower is better)
Translates to: FTGRKSEVIGATESPRGQYVVNW*SITDEC
Trigger: GCATTCATCAGTTATGCTTCACCAGTTTACGACGTA...CTGCCCCCTAGGAGACTCCGTCGCTCCAATTACTTCCGACTTCCTCCCTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544211.5
CDS-3UTR CCA 90 bp GGGGCAGACCAGCCATCTGACGGCAAAGCTCATCTAGCACAGGTGAGCAGTAAAACTCCAAGTCATCTGTaGAAGGTGCAATATCAGCCA +
Preference number: 4 (lower is better)
Translates to: GADQPSDGKAHLAQVSSKTPSHL*KVQYQP
Trigger: TGGCTGATATTGCACCTTCCACAGATGACTTGGAGT...TTTACTGCTCACCTGTGCTAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544211.5
CDS-3UTR TCA 90 bp TGTGGTGGTGGGTTCATCCCGGTACTACCCATAAACGAATCAGTAAATGAGACTGGCTGGCGAATAAGATaGACAGAGCCACTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: CGGGFIPVLPINESVNETGWRIR*TEPLPG
Trigger: TCCAGGGAGTGGCTCTGTTCATCTTATTCGCCAGCC...AGTCTCATTTACTGATTCGTTTATGGGTAGTACCGGGATGAACCCACCACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp CTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCGAGTCCTTTGGCTGCTaGATGTGTCTCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LRVSCQWLEKKEILLPLTESFGC*MCLSPL
Trigger: AAGAGGAGAGAGACACATTCAGCAGCCAAAGGACTC...GGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR TCA 90 bp TACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCCTCGTTGACTATTaGCCCCCAGGGGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: YCLRVSCQWLEKKEILLPLLVDY*PPGVSS
Trigger: ACTGGATACCCCTGGGGGTCAATAGTCAACGAGGAG...AGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR TCA 90 bp GGGGCAGACCAGCCATCTGACGGCAAAGCTCATCTAGCACAGGTGAGCAGTAAATACGTCGTAAACTGGTaGAGCATAACTGATGAATGC +
Preference number: 4 (lower is better)
Translates to: GADQPSDGKAHLAQVSSKYVVNW*SITDEC
Trigger: GCATTCATCAGTTATGCTTCACCAGTTTACGACGTA...TTTACTGCTCACCTGTGCTAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537009.5
ENST00000544211.5
CDS-3UTR TCA 90 bp TACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTGGCAGACCAGCCATCTaGCGGCAAAGCTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: YCLRVSCQWLEKKEILLPGRPAI*RQSSSF
Trigger: GAAAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCC...AGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
CDS-3UTR TCA 90 bp AGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATAGAGGAACACGTGAATaGTGGGGAGTTGGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: RVSCQWLEKKEILLPLTHRGTRE*WGVGLG
Trigger: TCCTAGACCAACTCCCCATCATTCACGTGTTCCTCT...ATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
CDS-3UTR TCA 90 bp AGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATCTCGTCTCAAATTTCTaGCCTCAAGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: RVSCQWLEKKEILLPLTHLVSNF*PQVIHP
Trigger: CGGGTGGATCACTTGAGGTCAGAAATTTGAGACGAG...ATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp CTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTTTGGCAGACCAGCCATCTaGCGGCAAAGCTCATCTAGC +
Preference number: 4 (lower is better)
Translates to: LSMVGEEGDPPSSHPYIFGRPAI*RQSSSS
Trigger: GCTAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCC...AAAAATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544211.5
CDS-3UTR CCA 90 bp AGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATTTTGCTTTGTGGTGGTaGGTTCATCCCGGTACTACC +
Preference number: 4 (lower is better)
Translates to: RVSCQWLEKKEILLPLTHFALWW*VHPGTT
Trigger: GGTAGTACCGGGATGAACCCACCACCACAAAGCAAA...ATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CCA 90 bp CTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCGGGGTTTCACCATGTTaGCCAGGCTCGTCTCAAATT +
Preference number: 4 (lower is better)
Translates to: LRVSCQWLEKKEILLPLTGVSPC*PGSSQI
Trigger: AATTTGAGACGAGCCTGGCCAACATGGTGAAACCCC...GGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp CAAATCCACATTTTCACAGGGAGGAAGTCGGAAGTAATTGGAGCGACGGAGTCTGAGTCCTTTGGCTGCTaGATGTGTCTCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QIHIFTGRKSEVIGATESESFGC*MCLSPL
Trigger: AAGAGGAGAGAGACACATTCAGCAGCCAAAGGACTC...AGACTCCGTCGCTCCAATTACTTCCGACTTCCTCCCTGTGAAAATGTGGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544211.5
CDS-3UTR TCA 90 bp CTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTTTCTCCTCGTTGACTATTaGCCCCCAGGGGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: LSMVGEEGDPPSSHPYIFLLVDY*PPGVSS
Trigger: ACTGGATACCCCTGGGGGTCAATAGTCAACGAGGAG...AAAAATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR TCA 90 bp AGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATGTAAAGAGGAACACGTaGATGATGGGGAGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: RVSCQWLEKKEILLPLTHVKRNT*MMGSWS
Trigger: AGACCAACTCCCCATCATTCACGTGTTCCTCTTTAC...ATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
CDS-3UTR GCA 90 bp CTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCAGGGAGATGGGAATTTaGAGTTGCTCACACCCTCAT +
Preference number: 4 (lower is better)
Translates to: LRVSCQWLEKKEILLPLTREMGI*SCSHPH
Trigger: ATGAGGGTGTGAGCAACTGCAAATTCCCATCTCCCT...GGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433590.6
CDS-3UTR CCA 90 bp GCAGACCAGCCATCTGACGGCAAAGCTCATCTAGCACAGGTGAGCAGTAAATGTTTAGCTGTCAATGGTTaGAGAAGAAGGAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: ADQPSDGKAHLAQVSSKCLAVNG*RRRRSS
Trigger: GGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA...ACATTTACTGCTCACCTGTGCTAGATGAGCTTTGCCGTCAGATGGCTGGTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544211.5
CDS-3UTR TCA 90 bp TGTGGTGGTGGGTTCATCCCGGTACTACCCATAAACGAATCAGTAAATGAGACTGAGTCCTTTGGCTGCTaGATGTGTCTCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: CGGGFIPVLPINESVNETESFGC*MCLSPL
Trigger: AAGAGGAGAGAGACACATTCAGCAGCCAAAGGACTC...AGTCTCATTTACTGATTCGTTTATGGGTAGTACCGGGATGAACCCACCACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp ATAGCGAATTATGAGTCCAAGTTCTATAGCTGGCATAGTCCTCATGCTTTAGCCACATCGTCTCCTCGTTaGCTATTGACCCCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: IANYESKFYSWHSPHALATSSPR*LLTPRG
Trigger: ACCCCTGGGGGTCAATAGTCAACGAGGAGACGATGT...GGCTAAAGCATGAGGACTATGCCAGCTATAGAACTTGGACTCATAATTCGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CCA 90 bp TTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATGAAACAGCAGCACCTTaGGTCCCAAGAGCGACATAT +
Preference number: 4 (lower is better)
Translates to: LAVNGWRRRRSSFLSPIHETAAP*VPRATY
Trigger: ATATGTCGCTCTTGGGACCCAAGGTGCTGCTGTTTC...ATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp TGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCAGGCCAAGTCATCTGTaGAAGGTGCAATATCAGCCA +
Preference number: 4 (lower is better)
Translates to: CLRVSCQWLEKKEILLPLRPSHL*KVQYQP
Trigger: TGGCTGATATTGCACCTTCCACAGATGACTTGGCCT...GAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359478.7
CDS-3UTR CCA 90 bp GCAGACCAGCCATCTGACGGCAAAGCTCATCTAGCACAGGTGAGCAGTAAATGTATGATCACAGACCATTaGGTCTCTGCAAATCCACAT +
Preference number: 4 (lower is better)
Translates to: ADQPSDGKAHLAQVSSKCMITDH*VSANPH
Trigger: ATGTGGATTTGCAGAGACCCAATGGTCTGTGATCAT...ACATTTACTGCTCACCTGTGCTAGATGAGCTTTGCCGTCAGATGGCTGGTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544211.5
CDS-3UTR CCA 90 bp CTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCTTAGCTGTCAATGGTTaGAGAAGAAGGAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: LRVSCQWLEKKEILLPLTLAVNG*RRRRSS
Trigger: GGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA...GGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR TCA 90 bp CTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTTTGAGTCCTTTGGCTGCTaGATGTGTCTCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LSMVGEEGDPPSSHPYIFESFGC*MCLSPL
Trigger: AAGAGGAGAGAGACACATTCAGCAGCCAAAGGACTC...AAAAATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR TCA 90 bp TCCAAAAGCCACTTGCACAATAATTCGACCGTGCACTTGTTAAGTTGTGAAGATCTCCTCGTTGACTATTaGCCCCCAGGGGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: SKSHLHNNSTVHLLSCEDLLVDY*PPGVSS
Trigger: ACTGGATACCCCTGGGGGTCAATAGTCAACGAGGAG...ATCTTCACAACTTAACAAGTGCACGGTCGAATTATTGTGCAAGTGGCTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp CTCTTTTTCAATGATCACAGACCATTGGGTCTCTGCAAATCCACATTTTCACAGACATCGTCTCCTCGTTaGCTATTGACCCCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: LFFNDHRPLGLCKSTFSQTSSPR*LLTPRG
Trigger: ACCCCTGGGGGTCAATAGTCAACGAGGAGACGATGT...CTGTGAAAATGTGGATTTGCAGAGACCCAATGGTCTGTGATCATTGAAAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000544211.5
CDS-3UTR TCA 90 bp ATAGCGAATTATGAGTCCAAGTTCTATAGCTGGCATAGTCCTCATGCTTTAGCCGTTTCTGGAGTCGCTTaGGTCACATCGTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: IANYESKFYSWHSPHALAVSGVA*VTSSPR
Trigger: ACGAGGAGACGATGTGACTCAAGCGACTCCAGAAAC...GGCTAAAGCATGAGGACTATGCCAGCTATAGAACTTGGACTCATAATTCGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp AAAGAAATTTATTTCTCACAGTTCTGGAGGCTGAGAAGTCCAAGAACATGGTGCGGCAGACCAGCCATCTaGCGGCAAAGCTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: KEIYFSQFWRLRSPRTWCGRPAI*RQSSSF
Trigger: GAAAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCC...GCACCATGTTCTTGGACTTCTCAGCCTCCAGAACTGTGAGAAATAAATTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543467.5
CDS-3UTR TCA 90 bp ACTTACCATGATGTGTCTTATAAGGAAGACTTGCCAGGCAAATTTTCGGGCAAGATTTCTGACCTCAAGTaGTCCACCCGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TYHDVSYKEDLPGKFSGKISDLK*STRLSF
Trigger: GAAGCTGAGGCGGGTGGATCACTTGAGGTCAGAAAT...CTTGCCCGAAAATTTGCCTGGCAAGTCTTCCTTATAAGACACATCATGGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR GCA 90 bp CTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCAGACCATTGGGTCTCTaGAAATCCACATTTTCACAG +
Preference number: 4 (lower is better)
Translates to: LRVSCQWLEKKEILLPLTRPLGL*KSTFSQ
Trigger: CTGTGAAAATGTGGATTTGCAGAGACCCAATGGTCT...GGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp AGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATATGATCACAGACCATTaGGTCTCTGCAAATCCACAT +
Preference number: 4 (lower is better)
Translates to: RVSCQWLEKKEILLPLTHMITDH*VSANPH
Trigger: ATGTGGATTTGCAGAGACCCAATGGTCTGTGATCAT...ATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp TGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCAGGGTTAGCTGTCAATaGTTGGAGAAGAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: CLRVSCQWLEKKEILLPLRVSCQ*LEKKEI
Trigger: GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT...GAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp TGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACTCCAAGTCATCTGTaGAAGGTGCAATATCAGCCA +
Preference number: 4 (lower is better)
Translates to: CLRVSCQWLEKKEILLPLTPSHL*KVQYQP
Trigger: TGGCTGATATTGCACCTTCCACAGATGACTTGGAGT...GAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396549.6
ENST00000543369.5
ENST00000544211.5
CDS-3UTR TCA 90 bp ACTTACCATGATGTGTCTTATAAGGAAGACTTGCCAGGCAAATTTTCGGGCAAGCCTCCGCTGAAACAATaGGATGAGGGAGAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: TYHDVSYKEDLPGKFSGKPPLKQ*DEGEQE
Trigger: TTCTTGCTCTCCCTCATCTCATTGTTTCAGCGGAGG...CTTGCCCGAAAATTTGCCTGGCAAGTCTTCCTTATAAGACACATCATGGTAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp ATAGCGAATTATGAGTCCAAGTTCTATAGCTGGCATAGTCCTCATGCTTTAGCCCCTCCGCTGAAACAATaGGATGAGGGAGAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: IANYESKFYSWHSPHALAPPLKQ*DEGEQE
Trigger: TTCTTGCTCTCCCTCATCTCATTGTTTCAGCGGAGG...GGCTAAAGCATGAGGACTATGCCAGCTATAGAACTTGGACTCATAATTCGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp AAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGGGCTGGCGAATAAGATaGACAGAGCCACTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: KDWFKKYCLRVSCQWLEKGWRIR*TEPLPG
Trigger: TCCAGGGAGTGGCTCTGTTCATCTTATTCGCCAGCC...CTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
CDS-3UTR TCA 90 bp CAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGACATCGTCTCCTCGTTaGCTATTGACCCCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: QKDWFKKYCLRVSCQWLETSSPR*LLTPRG
Trigger: ACCCCTGGGGGTCAATAGTCAACGAGGAGACGATGT...CTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR TCA 90 bp AAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGACATCGTCTCCTCGTTaGCTATTGACCCCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: KDWFKKYCLRVSCQWLEKTSSPR*LLTPRG
Trigger: ACCCCTGGGGGTCAATAGTCAACGAGGAGACGATGT...CTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR TCA 90 bp TGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGGTTTCTGGAGTCGCTTaGGTCACATCGTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: WFKKYCLRVSCQWLEKKEVSGVA*VTSSPR
Trigger: ACGAGGAGACGATGTGACTCAAGCGACTCCAGAAAC...CTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR TCA 90 bp TTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCGGCAGACCAGCCATCTaGCGGCAAAGCTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: FKKYCLRVSCQWLEKKEIGRPAI*RQSSSF
Trigger: GAAAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCC...GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
CDS-3UTR TCA 90 bp TGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCATTAAAATTCAAGTCTaGATGCCCTTCTTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: CLRVSCQWLEKKEILLPLIKIQV*MPFLGP
Trigger: GGGGCCTAAGAAGGGCATTCAGACTTGAATTTTAAT...GAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR GCA 90 bp TTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTGTCTATGGTGTTCTaGTCTTTCCACCGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LAVNGWRRRRSSFLSPIHLSMVF*SFHRVL
Trigger: AAGGACTCGGTGGAAAGAGCAGAACACCATAGACAA...ATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR GCA 90 bp TACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTTTGTCTATGGTGTTCTaGTCTTTCCACCGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: YCLRVSCQWLEKKEILLPLSMVF*SFHRVL
Trigger: AAGGACTCGGTGGAAAGAGCAGAACACCATAGACAA...AGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR GCA 90 bp TGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCTCCCGACTAGACAACTaGATGAAAAATTGGATAGCG +
Preference number: 4 (lower is better)
Translates to: CLRVSCQWLEKKEILLPLSRLDN*MKNWIA
Trigger: CGCTATCCAATTTTTCATGCAGTTGTCTAGTCGGGA...GAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CCA 90 bp TTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATACGCTGTTCCTACTTTaGCTGGCGAATAAGATGAAC +
Preference number: 4 (lower is better)
Translates to: LAVNGWRRRRSSFLSPIHTLFLL*LANKMN
Trigger: GTTCATCTTATTCGCCAGCCAAAGTAGGAACAGCGT...ATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
CDS-3UTR CCA 90 bp TGTGGTGGTGGGTTCATCCCGGTACTACCCATAAACGAATCAGTAAATGAGACTTTAGCTGTCAATGGTTaGAGAAGAAGGAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: CGGGFIPVLPINESVNETLAVNG*RRRRSS
Trigger: GGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA...AGTCTCATTTACTGATTCGTTTATGGGTAGTACCGGGATGAACCCACCACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CCA 90 bp TACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTAGGGTTAGCTGTCAATaGTTGGAGAAGAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: YCLRVSCQWLEKKEILLPRVSCQ*LEKKEI
Trigger: GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT...AGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp TTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATAGGGTTAGCTGTCAATaGTTGGAGAAGAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: LAVNGWRRRRSSFLSPIHRVSCQ*LEKKEI
Trigger: GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT...ATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp AGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATTCCAAGTTCTATAGCTaGCATAGTCCTCATGCTTTA +
Preference number: 4 (lower is better)
Translates to: RVSCQWLEKKEILLPLTHSKFYS*HSPHAL
Trigger: TAAAGCATGAGGACTATGCCAGCTATAGAACTTGGA...ATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp TGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGCCTCCGCTGAAACAATaGGATGAGGGAGAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: WFKKYCLRVSCQWLEKKEPPLKQ*DEGEQE
Trigger: TTCTTGCTCTCCCTCATCTCATTGTTTCAGCGGAGG...CTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
CDS-3UTR TCA 90 bp TTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGCTCCTCGTTGACTATTaGCCCCCAGGGGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: LQKDWFKKYCLRVSCQWLLLVDY*PPGVSS
Trigger: ACTGGATACCCCTGGGGGTCAATAGTCAACGAGGAG...CAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR TCA 90 bp ACATTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGCTCCTCGTTGACTATTaGCCCCCAGGGGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: TLQKDWFKKYCLRVSCQWLLVDY*PPGVSS
Trigger: ACTGGATACCCCTGGGGGTCAATAGTCAACGAGGAG...CCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR TCA 90 bp AACGAAGTAGCAACTCAAGGAAACGTCAACCAATGGTATGATTTCACATTAAGTGGCAGACCAGCCATCTaGCGGCAAAGCTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: NEVATQGNVNQWYDFTLSGRPAI*RQSSSF
Trigger: GAAAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCC...ACTTAATGTGAAATCATACCATTGGTTGACGTTTCCTTGAGTTGCTACTTCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp TGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATATCAGAGGCAGACCAGCCATCTaGCGGCAAAGCTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: WLAQIDKDSFFNPKIYIRGRPAI*RQSSSF
Trigger: GAAAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCC...TCTGATATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
CDS-3UTR GCA 90 bp TTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATAGACCATTGGGTCTCTaGAAATCCACATTTTCACAG +
Preference number: 4 (lower is better)
Translates to: LAVNGWRRRRSSFLSPIHRPLGL*KSTFSQ
Trigger: CTGTGAAAATGTGGATTTGCAGAGACCCAATGGTCT...ATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR GCA 90 bp TGTGGTGGTGGGTTCATCCCGGTACTACCCATAAACGAATCAGTAAATGAGACTAGACCATTGGGTCTCTaGAAATCCACATTTTCACAG +
Preference number: 4 (lower is better)
Translates to: CGGGFIPVLPINESVNETRPLGL*KSTFSQ
Trigger: CTGTGAAAATGTGGATTTGCAGAGACCCAATGGTCT...AGTCTCATTTACTGATTCGTTTATGGGTAGTACCGGGATGAACCCACCACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR GCA 90 bp TGTGGTGGTGGGTTCATCCCGGTACTACCCATAAACGAATCAGTAAATGAGACTTATCCAAAAGCCACTTaGACAATAATTCGACCGTGC +
Preference number: 4 (lower is better)
Translates to: CGGGFIPVLPINESVNETYPKAT*TIIRPC
Trigger: GCACGGTCGAATTATTGTGCAAGTGGCTTTTGGATA...AGTCTCATTTACTGATTCGTTTATGGGTAGTACCGGGATGAACCCACCACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CCA 90 bp CTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTTTACGCTGTTCCTACTTTaGCTGGCGAATAAGATGAAC +
Preference number: 4 (lower is better)
Translates to: LSMVGEEGDPPSSHPYIFTLFLL*LANKMN
Trigger: GTTCATCTTATTCGCCAGCCAAAGTAGGAACAGCGT...AAAAATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
CDS-3UTR CCA 90 bp TTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTCTGTGAATGTTTCTaGAGTCGCTTGAGTCACATC +
Preference number: 4 (lower is better)
Translates to: LAVNGWRRRRSSFLSPIHFCECF*SRLSHI
Trigger: GATGTGACTCAAGCGACTCCAGAAACATTCACAGAA...ATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp TACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTTTCTGTGAATGTTTCTaGAGTCGCTTGAGTCACATC +
Preference number: 4 (lower is better)
Translates to: YCLRVSCQWLEKKEILLPFCECF*SRLSHI
Trigger: GATGTGACTCAAGCGACTCCAGAAACATTCACAGAA...AGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp TACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTATGATCACAGACCATTaGGTCTCTGCAAATCCACAT +
Preference number: 4 (lower is better)
Translates to: YCLRVSCQWLEKKEILLPMITDH*VSANPH
Trigger: ATGTGGATTTGCAGAGACCCAATGGTCTGTGATCAT...AGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp CTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTTTTTAGCTGTCAATGGTTaGAGAAGAAGGAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: LSMVGEEGDPPSSHPYIFLAVNG*RRRRSS
Trigger: GGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA...AAAAATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp AGACTTGCCAGGCAAATTTTCGGGCAAGCCAGCAAAATAGTTAAAGTAAGAGTATTTGCTTTGTGGTGGTaGGTTCATCCCGGTACTACC +
Preference number: 4 (lower is better)
Translates to: RLARQIFGQASKIVKVRVFALWW*VHPGTT
Trigger: GGTAGTACCGGGATGAACCCACCACCACAAAGCAAA...TACTCTTACTTTAACTATTTTGCTGGCTTGCCCGAAAATTTGCCTGGCAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp TTAAGTTGTGAAGATGAACGAAGTAGCAACTCAAGGAAACGTCAACCAATGGTAAGATTTGGCCTCCGCTaGAACAATGAGATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LSCEDERSSNSRKRQPMVRFGLR*NNEMRE
Trigger: CTCCCTCATCTCATTGTTTCAGCGGAGGCCAAATCT...TACCATTGGTTGACGTTTCCTTGAGTTGCTACTTCGTTCATCTTCACAACTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp TTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCAGATTTGGCCTCCGCTaGAACAATGAGATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: FKKYCLRVSCQWLEKKEIRFGLR*NNEMRE
Trigger: CTCCCTCATCTCATTGTTTCAGCGGAGGCCAAATCT...GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
CDS-3UTR TCA 90 bp ACATTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGGTTTCTGGAGTCGCTTaGGTCACATCGTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: TLQKDWFKKYCLRVSCQWVSGVA*VTSSPR
Trigger: ACGAGGAGACGATGTGACTCAAGCGACTCCAGAAAC...CCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR TCA 90 bp CTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTTTTACGTCGTAAACTGGTaGAGCATAACTGATGAATGC +
Preference number: 4 (lower is better)
Translates to: LSMVGEEGDPPSSHPYIFYVVNW*SITDEC
Trigger: GCATTCATCAGTTATGCTTCACCAGTTTACGACGTA...AAAAATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
ENST00000544211.5
CDS-3UTR TCA 90 bp TTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTTCCTCTTTTTCAATaGTCACAGACCATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LAVNGWRRRRSSFLSPIHFPLFQ*SQTIGS
Trigger: AGACCCAATGGTCTGTGATCATTGAAAAAGAGGAAA...ATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR TCA 90 bp TTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGTTTCTGGAGTCGCTTaGGTCACATCGTCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LQKDWFKKYCLRVSCQWLVSGVA*VTSSEV
Trigger: CACCTCTGACGATGTGACTCAAGCGACTCCAGAAAC...CAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543369.5
CDS-3UTR GCA 90 bp CTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTTTAGACCATTGGGTCTCTaGAAATCCACATTTTCACAG +
Preference number: 4 (lower is better)
Translates to: LSMVGEEGDPPSSHPYIFRPLGL*KSTFSQ
Trigger: CTGTGAAAATGTGGATTTGCAGAGACCCAATGGTCT...AAAAATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR GCA 90 bp CTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTTTATGGGAATTTGCAGTTaGTCACACCCTCATTCCAAA +
Preference number: 4 (lower is better)
Translates to: LSMVGEEGDPPSSHPYIFMGICS*SHPHSK
Trigger: TTTGGAATGAGGGTGTGAGCAACTGCAAATTCCCAT...AAAAATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433590.6
CDS-3UTR CCA 90 bp CTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTTTATGATCACAGACCATTaGGTCTCTGCAAATCCACAT +
Preference number: 4 (lower is better)
Translates to: LSMVGEEGDPPSSHPYIFMITDH*VSANPH
Trigger: ATGTGGATTTGCAGAGACCCAATGGTCTGTGATCAT...AAAAATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp AAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTAGGGTTAGCTGTCAATaGTTGGAGAAGAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: KYCLRVSCQWLEKKEILLRVSCQ*LEKKEI
Trigger: GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT...AAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp TGTGGTGGTGGGTTCATCCCGGTACTACCCATAAACGAATCAGTAAATGAGACTTCCAAGTTCTATAGCTaGCATAGTCCTCATGCTTTA +
Preference number: 4 (lower is better)
Translates to: CGGGFIPVLPINESVNETSKFYS*HSPHAL
Trigger: TAAAGCATGAGGACTATGCCAGCTATAGAACTTGGA...AGTCTCATTTACTGATTCGTTTATGGGTAGTACCGGGATGAACCCACCACCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CCA 90 bp CTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCGGAAACGTCAACCAATaGTATGATTTCACATTAAGT +
Preference number: 4 (lower is better)
Translates to: LRVSCQWLEKKEILLPLTGNVNQ*YDFTLS
Trigger: ACTTAATGTGAAATCATACCATTGGTTGACGTTTCC...GGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR CAA 72 bp TTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTaGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCAT +
Preference number: 4 (lower is better)
Translates to: FKKYCLRVSCQW*EKKEILLPLTH
Trigger: ATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR TCA 90 bp ACATTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGGAGTCCTTTGGCTGCTaGATGTGTCTCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TLQKDWFKKYCLRVSCQWESFGC*MCLSPL
Trigger: AAGAGGAGAGAGACACATTCAGCAGCCAAAGGACTC...CCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR TCA 90 bp ATAGCGAATTATGAGTCCAAGTTCTATAGCTGGCATAGTCCTCATGCTTTAGCCTACGTCGTAAACTGGTaGAGCATAACTGATGAATGC +
Preference number: 4 (lower is better)
Translates to: IANYESKFYSWHSPHALAYVVNW*SITDEC
Trigger: GCATTCATCAGTTATGCTTCACCAGTTTACGACGTA...GGCTAAAGCATGAGGACTATGCCAGCTATAGAACTTGGACTCATAATTCGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp TGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATATCAGAAGAGGAACACGTGAATaGTGGGGAGTTGGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: WLAQIDKDSFFNPKIYIRRGTRE*WGVGLG
Trigger: TCCTAGACCAACTCCCCATCATTCACGTGTTCCTCT...TCTGATATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
CDS-3UTR TCA 90 bp ACATTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGAGAGGAACACGTGAATaGTGGGGAGTTGGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: TLQKDWFKKYCLRVSCQWRGTRE*WGVGLG
Trigger: TCCTAGACCAACTCCCCATCATTCACGTGTTCCTCT...CCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
CDS-3UTR TCA 90 bp ATTCTATGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATATTTCTGACCTCAAGTaGTCCACCCGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ILWLAQIDKDSFFNPKIYISDLK*STRLSF
Trigger: GAAGCTGAGGCGGGTGGATCACTTGAGGTCAGAAAT...ATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCATAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp TACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCAGATATGGTTGCTATaGATTAGACTGTATCTAAGC +
Preference number: 4 (lower is better)
Translates to: YCLRVSCQWLEKKEILLPQIWLL*IRLYLS
Trigger: GCTTAGATACAGTCTAATTCATAGCAACCATATCTG...AGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR GCA 90 bp TGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGTTGTCTATGGTGTTCTaGTCTTTCCACCGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: WFKKYCLRVSCQWLEKKELSMVF*SFHRVL
Trigger: AAGGACTCGGTGGAAAGAGCAGAACACCATAGACAA...CTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR GCA 90 bp CAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGCTCAGCTTCCCAAAGTaGTCAGATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: QKDWFKKYCLRVSCQWLELSFPK*SDYRHE
Trigger: CTCATGCCTGTAATCTGAGCACTTTGGGAAGCTGAG...CTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CCA 90 bp AAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTTTCTGTGAATGTTTCTaGAGTCGCTTGAGTCACATC +
Preference number: 4 (lower is better)
Translates to: KYCLRVSCQWLEKKEILLFCECF*SRLSHI
Trigger: GATGTGACTCAAGCGACTCCAGAAACATTCACAGAA...AAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp TGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGTTAGCTGTCAATGGTTaGAGAAGAAGGAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: WFKKYCLRVSCQWLEKKELAVNG*RRRRSS
Trigger: GGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA...CTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp TCCAAAAGCCACTTGCACAATAATTCGACCGTGCACTTGTTAAGTTGTGAAGATAGGGTTAGCTGTCAATaGTTGGAGAAGAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: SKSHLHNNSTVHLLSCEDRVSCQ*LEKKEI
Trigger: GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT...ATCTTCACAACTTAACAAGTGCACGGTCGAATTATTGTGCAAGTGGCTTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CCA 90 bp TTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGGGGTTTCACCATGTTaGCCAGGCTCGTCTCAAATT +
Preference number: 4 (lower is better)
Translates to: LQKDWFKKYCLRVSCQWLGVSPC*PGSSQI
Trigger: AATTTGAGACGAGCCTGGCCAACATGGTGAAACCCC...CAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
3UTR CAA 72 bp TCCAAAAGCCACTTGCACAATAATTCGACCGTGCACTaGTTAAGTTGTGAAGATGAACGAAGTAGCAACTCA +
Preference number: 4 (lower is better)
Translates to: SKSHLHNNSTVH*LSCEDERSSNS
Trigger: TGAGTTGCTACTTCGTTCATCTTCACAACTTAACAAGTGCACGGTCGAATTATTGTGCAAGTGGCTTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp AAAGAAATTTATTTCTCACAGTTCTGGAGGCTGAGAAGTCCAAGAACATGGTGCTACGTCGTAAACTGGTaGAGCATAACTGATGAATGC +
Preference number: 4 (lower is better)
Translates to: KEIYFSQFWRLRSPRTWCYVVNW*SITDEC
Trigger: GCATTCATCAGTTATGCTTCACCAGTTTACGACGTA...GCACCATGTTCTTGGACTTCTCAGCCTCCAGAACTGTGAGAAATAAATTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543467.5
CDS-3UTR TCA 90 bp AAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTTTTCCTCTTTTTCAATaGTCACAGACCATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KYCLRVSCQWLEKKEILLFPLFQ*SQTIGS
Trigger: AGACCCAATGGTCTGTGATCATTGAAAAAGAGGAAA...AAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR TCA 90 bp TGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATATCAGAGTAAAGAGGAACACGTaGATGATGGGGAGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: WLAQIDKDSFFNPKIYIRVKRNT*MMGSWS
Trigger: AGACCAACTCCCCATCATTCACGTGTTCCTCTTTAC...TCTGATATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
CDS-3UTR TCA 90 bp ATTCTATGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATCTCGTCTCAAATTTCTaGCCTCAAGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: ILWLAQIDKDSFFNPKIYLVSNF*PQVIHP
Trigger: CGGGTGGATCACTTGAGGTCAGAAATTTGAGACGAG...ATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCATAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp AAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGGAAACTCTGTGCCTATaGGGTTTCTCTAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: KDWFKKYCLRVSCQWLEKETLCL*GFSKVA
Trigger: AGCCACTTTAGAGAAACCTCATAGGCACAGAGTTTC...CTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359478.7
CDS-3UTR GCA 90 bp AAAGAAATTTATTTCTCACAGTTCTGGAGGCTGAGAAGTCCAAGAACATGGTGCAGACCATTGGGTCTCTaGAAATCCACATTTTCACAG +
Preference number: 4 (lower is better)
Translates to: KEIYFSQFWRLRSPRTWCRPLGL*KSTFSQ
Trigger: CTGTGAAAATGTGGATTTGCAGAGACCCAATGGTCT...GCACCATGTTCTTGGACTTCTCAGCCTCCAGAACTGTGAGAAATAAATTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543467.5
CDS-3UTR GCA 90 bp AACGAAGTAGCAACTCAAGGAAACGTCAACCAATGGTATGATTTCACATTAAGTCTCAGCTTCCCAAAGTaGTCAGATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: NEVATQGNVNQWYDFTLSLSFPK*SDYRHE
Trigger: CTCATGCCTGTAATCTGAGCACTTTGGGAAGCTGAG...ACTTAATGTGAAATCATACCATTGGTTGACGTTTCCTTGAGTTGCTACTTCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR GCA 90 bp CAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGCTTAAGATGGACTTTTaGTTTTGTCACCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QKDWFKKYCLRVSCQWLELKMDF*FCHPGW
Trigger: CCAGCCTGGGTGACAAAAGCAAAAGTCCATCTTAAG...CTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CCA 90 bp TTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCACGCTGTTCCTACTTTaGCTGGCGAATAAGATGAAC +
Preference number: 4 (lower is better)
Translates to: FKKYCLRVSCQWLEKKEITLFLL*LANKMN
Trigger: GTTCATCTTATTCGCCAGCCAAAGTAGGAACAGCGT...GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
CDS-3UTR CCA 90 bp CAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGACGCTGTTCCTACTTTaGCTGGCGAATAAGATGAAC +
Preference number: 4 (lower is better)
Translates to: QKDWFKKYCLRVSCQWLETLFLL*LANKMN
Trigger: GTTCATCTTATTCGCCAGCCAAAGTAGGAACAGCGT...CTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
CDS-3UTR CCA 90 bp TGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGTTCTGTGAATGTTTCTaGAGTCGCTTGAGTCACATC +
Preference number: 4 (lower is better)
Translates to: WFKKYCLRVSCQWLEKKEFCECF*SRLSHI
Trigger: GATGTGACTCAAGCGACTCCAGAAACATTCACAGAA...CTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp TGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATGATCACAGACCATTaGGTCTCTGCAAATCCACAT +
Preference number: 4 (lower is better)
Translates to: WFKKYCLRVSCQWLEKKEMITDH*VSANPH
Trigger: ATGTGGATTTGCAGAGACCCAATGGTCTGTGATCAT...CTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp AAAGAAATTTATTTCTCACAGTTCTGGAGGCTGAGAAGTCCAAGAACATGGTGCATGATCACAGACCATTaGGTCTCTGCAAATCCACAT +
Preference number: 4 (lower is better)
Translates to: KEIYFSQFWRLRSPRTWCMITDH*VSANPH
Trigger: ATGTGGATTTGCAGAGACCCAATGGTCTGTGATCAT...GCACCATGTTCTTGGACTTCTCAGCCTCCAGAACTGTGAGAAATAAATTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543467.5
CDS-3UTR CCA 90 bp AAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAGGGTTAGCTGTCAATaGTTGGAGAAGAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: KDWFKKYCLRVSCQWLEKRVSCQ*LEKKEI
Trigger: GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT...CTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR TCA 90 bp AAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGTACGTCGTAAACTGGTaGAGCATAACTGATGAATGC +
Preference number: 4 (lower is better)
Translates to: KDWFKKYCLRVSCQWLEKYVVNW*SITDEC
Trigger: GCATTCATCAGTTATGCTTCACCAGTTTACGACGTA...CTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
ENST00000544211.5
CDS-3UTR TCA 90 bp TGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGTTTCCTCTTTTTCAATaGTCACAGACCATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: WFKKYCLRVSCQWLEKKEFPLFQ*SQTIGS
Trigger: AGACCCAATGGTCTGTGATCATTGAAAAAGAGGAAA...CTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR TCA 90 bp AAAGAAATTTATTTCTCACAGTTCTGGAGGCTGAGAAGTCCAAGAACATGGTGCTTTCCTCTTTTTCAATaGTCACAGACCATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KEIYFSQFWRLRSPRTWCFPLFQ*SQTIGS
Trigger: AGACCCAATGGTCTGTGATCATTGAAAAAGAGGAAA...GCACCATGTTCTTGGACTTCTCAGCCTCCAGAACTGTGAGAAATAAATTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543467.5
CDS-3UTR TCA 90 bp AAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGATTAAAATTCAAGTCTaGATGCCCTTCTTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: KDWFKKYCLRVSCQWLEKIKIQV*MPFLGP
Trigger: GGGGCCTAAGAAGGGCATTCAGACTTGAATTTTAAT...CTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR GCA 90 bp ACATTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGTCTATGGTGTTCTaGTCTTTCCACCGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: TLQKDWFKKYCLRVSCQWLSMVF*SFHRVL
Trigger: AAGGACTCGGTGGAAAGAGCAGAACACCATAGACAA...CCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR GCA 90 bp CAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAGACCATTGGGTCTCTaGAAATCCACATTTTCACAG +
Preference number: 4 (lower is better)
Translates to: QKDWFKKYCLRVSCQWLERPLGL*KSTFSQ
Trigger: CTGTGAAAATGTGGATTTGCAGAGACCCAATGGTCT...CTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR GCA 90 bp TTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTTATAAGGAAGACTTaGCAGGCAAATTTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: FKKYCLRVSCQWLEKKEILIRKT*QANFRA
Trigger: TGCCCGAAAATTTGCCTGGCAAGTCTTCCTTATAAG...GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR GCA 90 bp AAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGTCCCGACTAGACAACTaGATGAAAAATTGGATAGCG +
Preference number: 4 (lower is better)
Translates to: KDWFKKYCLRVSCQWLEKSRLDN*MKNWIA
Trigger: CGCTATCCAATTTTTCATGCAGTTGTCTAGTCGGGA...CTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR GCA 90 bp TTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCTATCCAAAAGCCACTTaGACAATAATTCGACCGTGC +
Preference number: 4 (lower is better)
Translates to: FKKYCLRVSCQWLEKKEIYPKAT*TIIRPC
Trigger: GCACGGTCGAATTATTGTGCAAGTGGCTTTTGGATA...GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR GCA 90 bp ACATTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGCTTAAGATGGACTTTTaGTTTTGTCACCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TLQKDWFKKYCLRVSCQWLKMDF*FCHPGW
Trigger: CCAGCCTGGGTGACAAAAGCAAAAGTCCATCTTAAG...CCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR GCA 90 bp AGACTTGCCAGGCAAATTTTCGGGCAAGCCAGCAAAATAGTTAAAGTAAGAGTAGGAGTAGAGATTATATaGTTTGGGGCTTTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: RLARQIFGQASKIVKVRVGVEII*FGAFCS
Trigger: GCTACAAAAAGCCCCAAAGCATATAATCTCTACTCC...TACTCTTACTTTAACTATTTTGCTGGCTTGCCCGAAAATTTGCCTGGCAAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359478.7
CDS-3UTR CCA 90 bp CAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGTTCTGTGAATGTTTCTaGAGTCGCTTGAGTCACATC +
Preference number: 4 (lower is better)
Translates to: QKDWFKKYCLRVSCQWLEFCECF*SRLSHI
Trigger: GATGTGACTCAAGCGACTCCAGAAACATTCACAGAA...CTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CCA 90 bp AACGAAGTAGCAACTCAAGGAAACGTCAACCAATGGTATGATTTCACATTAAGTGGAAATGTTGCAATGTaGAGTAGGAGGGTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: NEVATQGNVNQWYDFTLSGNVAM*SRRVKF
Trigger: GAACTTGACCCTCCTACTCCACATTGCAACATTTCC...ACTTAATGTGAAATCATACCATTGGTTGACGTTTCCTTGAGTTGCTACTTCGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359478.7
CDS-3UTR CCA 90 bp ACATTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGCATCCAAGTCATCTGTaGAAGGTGCAATATCAGCCA +
Preference number: 4 (lower is better)
Translates to: TLQKDWFKKYCLRVSCQWHPSHL*KVQYQP
Trigger: TGGCTGATATTGCACCTTCCACAGATGACTTGGATG...CCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535336.5
CDS-3UTR TCA 90 bp AAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGTTTCCTCTTTTTCAATaGTCACAGACCATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KDWFKKYCLRVSCQWLEKFPLFQ*SQTIGS
Trigger: AGACCCAATGGTCTGTGATCATTGAAAAAGAGGAAA...CTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR TCA 90 bp TTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCTTTCCTCTTTTTCAATaGTCACAGACCATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: FKKYCLRVSCQWLEKKEIFPLFQ*SQTIGS
Trigger: AGACCCAATGGTCTGTGATCATTGAAAAAGAGGAAA...GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR TCA 90 bp TGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGCTCCTAGCTCCTATTTaGATTCCATTGGCTTTTATA +
Preference number: 4 (lower is better)
Translates to: WFKKYCLRVSCQWLEKKELLAPI*IPLAFI
Trigger: TATAAAAGCCAATGGAATTCAAATAGGAGCTAGGAG...CTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359478.7
CDS-3UTR GCA 90 bp ACATTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGCTTATAAGGAAGACTTaGCAGGCAAATTTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: TLQKDWFKKYCLRVSCQWLIRKT*QANFRA
Trigger: TGCCCGAAAATTTGCCTGGCAAGTCTTCCTTATAAG...CCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CCA 90 bp TGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATATCAGAATGATCACAGACCATTaGGTCTCTGCAAATCCACAT +
Preference number: 4 (lower is better)
Translates to: WLAQIDKDSFFNPKIYIRMITDH*VSANPH
Trigger: ATGTGGATTTGCAGAGACCCAATGGTCTGTGATCAT...TCTGATATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
CDS-3UTR CCA 90 bp ATTCTATGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATACTCCAAGTCATCTGTaGAAGGTGCAATATCAGCCA +
Preference number: 4 (lower is better)
Translates to: ILWLAQIDKDSFFNPKIYTPSHL*KVQYQP
Trigger: TGGCTGATATTGCACCTTCCACAGATGACTTGGAGT...ATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCATAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396549.6
ENST00000543369.5
CDS-3UTR GCA 90 bp ATTCTATGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATAGACCATTGGGTCTCTaGAAATCCACATTTTCACAG +
Preference number: 4 (lower is better)
Translates to: ILWLAQIDKDSFFNPKIYRPLGL*KSTFSQ
Trigger: CTGTGAAAATGTGGATTTGCAGAGACCCAATGGTCT...ATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCATAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
CDS-3UTR GCA 90 bp CAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGTTAAGTTGTCTAATTTaGTTTGTGGTGGTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: QKDWFKKYCLRVSCQWLELSCLI*FVVVGS
Trigger: TGAACCCACCACCACAAAGCAAATTAGACAACTTAA...CTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR GCA 90 bp TTAAGTTGTGAAGATGAACGAAGTAGCAACTCAAGGAAACGTCAACCAATGGTATTAAGTTGTCTAATTTaGTTTGTGGTGGTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: LSCEDERSSNSRKRQPMVLSCLI*FVVVGS
Trigger: TGAACCCACCACCACAAAGCAAATTAGACAACTTAA...TACCATTGGTTGACGTTTCCTTGAGTTGCTACTTCGTTCATCTTCACAACTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp TTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGCGTCAACCAATGGTATaGTTTCACATTAAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LQKDWFKKYCLRVSCQWLRQPMV*FHIKLS
Trigger: AGACAACTTAATGTGAAATCATACCATTGGTTGACG...CAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp TGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATATCAGACGTCAACCAATGGTATaGTTTCACATTAAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: WLAQIDKDSFFNPKIYIRRQPMV*FHIKLS
Trigger: AGACAACTTAATGTGAAATCATACCATTGGTTGACG...TCTGATATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR TCA 90 bp TTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGCAGATATGGTTGCTATaGATTAGACTGTATCTAAGC +
Preference number: 4 (lower is better)
Translates to: LQKDWFKKYCLRVSCQWLQIWLL*IRLYLS
Trigger: GCTTAGATACAGTCTAATTCATAGCAACCATATCTG...CAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CCA 90 bp TGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATATCAGAGGAAACGTCAACCAATaGTATGATTTCACATTAAGT +
Preference number: 4 (lower is better)
Translates to: WLAQIDKDSFFNPKIYIRGNVNQ*YDFTLS
Trigger: ACTTAATGTGAAATCATACCATTGGTTGACGTTTCC...TCTGATATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp ATTGGAGCGACGGAGTCTCCTAGGGGGCAGACCAGCCATCTGACGGCAAAGCTCCACATCGTCTCCTCGTaGACTATTGACCCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: IGATESPRGQTSHLTAKLHIVSS*TIDPQG
Trigger: CCCCTGGGGGTCAATAGTCAACGAGGAGACGATGTG...GAGCTTTGCCGTCAGATGGCTGGTCTGCCCCCTAGGAGACTCCGTCGCTCCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000537009.5
ENST00000544211.5
CDS-3UTR CAA 90 bp ATTGGAGCGACGGAGTCTCCTAGGGGGCAGACCAGCCATCTGACGGCAAAGCTCTGTTTCTGGAGTCGCTaGAGTCACATCGTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: IGATESPRGQTSHLTAKLCFWSR*SHIVSS
Trigger: CGAGGAGACGATGTGACTCAAGCGACTCCAGAAACA...GAGCTTTGCCGTCAGATGGCTGGTCTGCCCCCTAGGAGACTCCGTCGCTCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537009.5
ENST00000544211.5
CDS-3UTR CAA 90 bp GGAGCGACGGAGTCTCCTAGGGGGCAGACCAGCCATCTGACGGCAAAGCTCATCCCCAAGAGCGACATATaGTCTATGGTGTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GATESPRGQTSHLTAKLIPKSDI*SMVFCS
Trigger: AGAGCAGAACACCATAGACAATATGTCGCTCTTGGG...GATGAGCTTTGCCGTCAGATGGCTGGTCTGCCCCCTAGGAGACTCCGTCGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537009.5
ENST00000544211.5
CDS CCA 90 bp CTTTTTAGGATCCTTCAGCAGCTGCACACTATCCAGAATGGGCTCTaGGGAAAGCCTAGAATGGCCCTGATGACCTGGGGGTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: LFRILQQLHTIQNGL*GKPRMALMTWGSQI
Trigger: GATCTGGGACCCCCAGGTCATCAGGGCCATTCTAGGCTTTCCCCAGAGCCCATTCTGGATAGTGTGCAGCTGCTGAAGGATCCTAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537128.1
CDS-3UTR CAA 90 bp AGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATCACATCGTCTCCTCGTaGACTATTGACCCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: RVSCQWLEKKEILLPLTHHIVSS*TIDPQG
Trigger: CCCCTGGGGGTCAATAGTCAACGAGGAGACGATGTG...ATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS TCA 90 bp GCCACTCCCTGGAAAGGACTTCAGATTTGGCCTCCGCTGAAACAATaGGATGAGGGAGAGCAAGAAAGCCAGGCTAGGCGTAGAATGTGT +
Preference number: 5 (lower is better)
Translates to: ATPWKGLQIWPPLKQ*DEGEQESQARRRMC
Trigger: ACACATTCTACGCCTAGCCTGGCTTTCTTGCTCTCCCTCATCTCATTGTTTCAGCGGAGGCCAAATCTGAAGTCCTTTCCAGGGAGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000537128.1
ENST00000538107.5
CDS-3UTR CAA 90 bp GCAGACCAGCCATCTGACGGCAAAGCTCATCTAGCACAGGTGAGCAGTAAATGTAGAAACAGCAGCACCTaGGGTCCCAAGAGCGACATA +
Preference number: 5 (lower is better)
Translates to: ADQPSDGKAHLAQVSSKCRNSST*GPKSDI
Trigger: TATGTCGCTCTTGGGACCCAAGGTGCTGCTGTTTCT...ACATTTACTGCTCACCTGTGCTAGATGAGCTTTGCCGTCAGATGGCTGGTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537009.5
ENST00000544211.5
CDS-3UTR CAA 90 bp GGGGCAGACCAGCCATCTGACGGCAAAGCTCATCTAGCACAGGTGAGCAGTAAACGAGAGCAGATCTCCTaGTTGACGATGTACATACGT +
Preference number: 5 (lower is better)
Translates to: GADQPSDGKAHLAQVSSKREQIS*LTMYIR
Trigger: ACGTATGTACATCGTCAACAAGGAGATCTGCTCTCG...TTTACTGCTCACCTGTGCTAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537009.5
ENST00000544211.5
CDS-3UTR CAA 90 bp AGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATAGAAACAGCAGCACCTaGGGTCCCAAGAGCGACATA +
Preference number: 5 (lower is better)
Translates to: RVSCQWLEKKEILLPLTHRNSST*GPKSDI
Trigger: TATGTCGCTCTTGGGACCCAAGGTGCTGCTGTTTCT...ATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp TACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCACATCGTCTCCTCGTaGACTATTGACCCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: YCLRVSCQWLEKKEILLPHIVSS*TIDPQG
Trigger: CCCCTGGGGGTCAATAGTCAACGAGGAGACGATGTG...AGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR CAA 90 bp AGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATTGTTTCTGGAGTCGCTaGAGTCACATCGTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: RVSCQWLEKKEILLPLTHCFWSR*SHIVSS
Trigger: CGAGGAGACGATGTGACTCAAGCGACTCCAGAAACA...ATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS TCA 90 bp TATTGTCTATGGTGTTCTGCTCTTTCCACCGAGTCCTTTGGCTGCTaGATGTGTCTCTCTCCTCTTACGCTGTTCCTACTTTGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: YCLWCSALSTESFGC*MCLSPLTLFLLWLA
Trigger: CGCCAGCCAAAGTAGGAACAGCGTAAGAGGAGAGAGACACATTCAGCAGCCAAAGGACTCGGTGGAAAGAGCAGAACACCATAGACAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000537128.1
ENST00000538107.5
CDS-3UTR CAA 90 bp AGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATTTTCCACCGAGTCCTTaGGCTGCTGAATGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: RVSCQWLEKKEILLPLTHFPPSP*AAECVS
Trigger: AGAGACACATTCAGCAGCCAAAGGACTCGGTGGAAA...ATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp TGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCAGAAACAGCAGCACCTaGGGTCCCAAGAGCGACATA +
Preference number: 5 (lower is better)
Translates to: CLRVSCQWLEKKEILLPLRNSST*GPKSDI
Trigger: TATGTCGCTCTTGGGACCCAAGGTGCTGCTGTTTCT...GAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp CAAATCCACATTTTCACAGGGAGGAAGTCGGAAGTAATTGGAGCGACGGAGTCTAGAAACAGCAGCACCTaGGGTCCCAAGAGCGACATA +
Preference number: 5 (lower is better)
Translates to: QIHIFTGRKSEVIGATESRNSST*GPKSDI
Trigger: TATGTCGCTCTTGGGACCCAAGGTGCTGCTGTTTCT...AGACTCCGTCGCTCCAATTACTTCCGACTTCCTCCCTGTGAAAATGTGGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544211.5
CDS-3UTR CAA 90 bp TGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCTGTTTCTGGAGTCGCTaGAGTCACATCGTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: CLRVSCQWLEKKEILLPLCFWSR*SHIVSS
Trigger: CGAGGAGACGATGTGACTCAAGCGACTCCAGAAACA...GAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR CAA 90 bp GCAGACCAGCCATCTGACGGCAAAGCTCATCTAGCACAGGTGAGCAGTAAATGTGAGCAGATCTCCTTGTaGACGATGTACATACGTCGT +
Preference number: 5 (lower is better)
Translates to: ADQPSDGKAHLAQVSSKCEQISL*TMYIRR
Trigger: ACGACGTATGTACATCGTCAACAAGGAGATCTGCTC...ACATTTACTGCTCACCTGTGCTAGATGAGCTTTGCCGTCAGATGGCTGGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537009.5
ENST00000544211.5
CDS TCA 90 bp GAAAGCCAGGCTAGGCGTAGAATGTGTGTTACAATGAGGCTGGAATaGGAAGGGAGATGGGAATTTGCAGTTGCTCACACCCTCATTCCA +
Preference number: 5 (lower is better)
Translates to: ESQARRRMCVTMRLE*EGRWEFAVAHTLIP
Trigger: TGGAATGAGGGTGTGAGCAACTGCAAATTCCCATCTCCCTTCTCATTCCAGCCTCATTGTAACACACATTCTACGCCTAGCCTGGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433590.6
ENST00000537128.1
ENST00000538107.5
CDS TCA 90 bp AGGGAGAGCAAGAAAGCCAGGCTAGGCGTAGAATGTGTGTTACAATaGGGCTGGAATGAGAAGGGAGATGGGAATTTGCAGTTGCTCACA +
Preference number: 5 (lower is better)
Translates to: RESKKARLGVECVLQ*GWNEKGDGNLQLLT
Trigger: TGTGAGCAACTGCAAATTCCCATCTCCCTTCTCATTCCAGCCTCATTGTAACACACATTCTACGCCTAGCCTGGCTTTCTTGCTCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433590.6
ENST00000537128.1
ENST00000538107.5
CDS GCA 90 bp TATTTGGGAGGTCTGCTCAAGACTAAGTTCAGTGACATTCCCCATTaGCCCCTCCAGCCCTTTCACACACACACAGACATACACACATTC +
Preference number: 5 (lower is better)
Translates to: YLGGLLKTKFSDIPH*PLQPFHTHTDIHTF
Trigger: GAATGTGTGTATGTCTGTGTGTGTGTGAAAGGGCTGGAGGGGGCAATGGGGAATGTCACTGAACTTAGTCTTGAGCAGACCTCCCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544889.1
CDS-3UTR CAA 90 bp CTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCGAAAGGACTTCAGATTaGGCCTCCGCTGAAACAATG +
Preference number: 5 (lower is better)
Translates to: LRVSCQWLEKKEILLPLTERTSD*ASAETM
Trigger: CATTGTTTCAGCGGAGGCCAAATCTGAAGTCCTTTC...GGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
CDS-3UTR CAA 90 bp TACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTAGAAACAGCAGCACCTaGGGTCCCAAGAGCGACATA +
Preference number: 5 (lower is better)
Translates to: YCLRVSCQWLEKKEILLPRNSST*GPKSDI
Trigger: TATGTCGCTCTTGGGACCCAAGGTGCTGCTGTTTCT...AGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp AGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATGAGCAGATCTCCTTGTaGACGATGTACATACGTCGT +
Preference number: 5 (lower is better)
Translates to: RVSCQWLEKKEILLPLTHEQISL*TMYIRR
Trigger: ACGACGTATGTACATCGTCAACAAGGAGATCTGCTC...ATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp CTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCGTTAGCTGTCAATGGTaGGAGAAGAAGGAGATCCTC +
Preference number: 5 (lower is better)
Translates to: LRVSCQWLEKKEILLPLTVSCQW*EKKEIL
Trigger: GAGGATCTCCTTCTTCTCCAACCATTGACAGCTAAC...GGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp TTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATGATGGACTTTTGCTTTaGTCACCCAGGCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: LAVNGWRRRRSSFLSPIHDGLLL*SPRLEC
Trigger: GCACTCCAGCCTGGGTGACAAAAGCAAAAGTCCATC...ATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS CCA 90 bp TGTAGCGGGATCATTCACCAGATTAGGATCTTCTGTGAATGTTTCTaGAGTCGCTTGAGTCACATCGTCTCCTCGTTGACTATTGACCCC +
Preference number: 5 (lower is better)
Translates to: CSGIIHQIRIFCECF*SRLSHIVSSLTIDP
Trigger: GGGGTCAATAGTCAACGAGGAGACGATGTGACTCAAGCGACTCCAGAAACATTCACAGAAGATCCTAATCTGGTGAATGATCCCGCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000534833.5
ENST00000535336.5
ENST00000535411.5
ENST00000537009.5
ENST00000537128.1
ENST00000538107.5
ENST00000540087.5
ENST00000544211.5
ENST00000544889.1
CDS CCA 90 bp ATCTGCTCATCTTGGCGTCTCCTTCATCAGAATTCCACGGTTATTTaGGAGGTCTGCTCAAGACTAAGTTCAGTGACATTCCCCATTGCC +
Preference number: 5 (lower is better)
Translates to: ICSSWRLLHQNSTVI*EVCSRLSSVTFPIA
Trigger: GGCAATGGGGAATGTCACTGAACTTAGTCTTGAGCAGACCTCCCAAATAACCGTGGAATTCTGATGAAGGAGACGCCAAGATGAGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544889.1
CDS CCA 90 bp TGCTACCAAGTCAGAGGAAATTTTACATTCTACATGGTCCGTACTTaGCCCTACCCTTTGGCCTCTTTCACCCCTGATGTGGAATCTTCC +
Preference number: 5 (lower is better)
Translates to: CYQVRGNFTFYMVRT*PYPLASFTPDVESS
Trigger: GGAAGATTCCACATCAGGGGTGAAAGAGGCCAAAGGGTAGGGCCAAGTACGGACCATGTAGAATGTAAAATTTCCTCTGACTTGGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544889.1
CDS-3UTR CAA 90 bp TCCAAAAGCCACTTGCACAATAATTCGACCGTGCACTTGTTAAGTTGTGAAGATCACATCGTCTCCTCGTaGACTATTGACCCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: SKSHLHNNSTVHLLSCEDHIVSS*TIDPQG
Trigger: CCCCTGGGGGTCAATAGTCAACGAGGAGACGATGTG...ATCTTCACAACTTAACAAGTGCACGGTCGAATTATTGTGCAAGTGGCTTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp TGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCGTTAGCTGTCAATGGTaGGAGAAGAAGGAGATCCTC +
Preference number: 5 (lower is better)
Translates to: CLRVSCQWLEKKEILLPLVSCQW*EKKEIL
Trigger: GAGGATCTCCTTCTTCTCCAACCATTGACAGCTAAC...GAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp CTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTTTGATGGACTTTTGCTTTaGTCACCCAGGCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: LSMVGEEGDPPSSHPYIFDGLLL*SPRLEC
Trigger: GCACTCCAGCCTGGGTGACAAAAGCAAAAGTCCATC...AAAAATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp TACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTTGTTTCTGGAGTCGCTaGAGTCACATCGTCAGAGGT +
Preference number: 5 (lower is better)
Translates to: YCLRVSCQWLEKKEILLPCFWSR*SHIVRG
Trigger: ACCTCTGACGATGTGACTCAAGCGACTCCAGAAACA...AGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543369.5
CDS CCA 90 bp TGTAGCGGGATCATTCACCAGATTAGGATCTTCTGTGAATGTTTCTaGAGTCGCTTGAGTCACATCGTCAGAGGTGATGATGAATGCAGC +
Preference number: 5 (lower is better)
Translates to: CSGIIHQIRIFCECF*SRLSHIVRGDDECS
Trigger: GCTGCATTCATCATCACCTCTGACGATGTGACTCAAGCGACTCCAGAAACATTCACAGAAGATCCTAATCTGGTGAATGATCCCGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543369.5
CDS CCA 90 bp GAGGAAATTTTACATTCTACATGGTCCGTACTTGGCCCTACCCTTTaGCCTCTTTCACCCCTGATGTGGAATCTTCCTTTCTCATATGCG +
Preference number: 5 (lower is better)
Translates to: EEILHSTWSVLGPTL*PLSPLMWNLPFSYA
Trigger: CGCATATGAGAAAGGAAGATTCCACATCAGGGGTGAAAGAGGCCAAAGGGTAGGGCCAAGTACGGACCATGTAGAATGTAAAATTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544889.1
CDS-3UTR CAA 90 bp TACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCCCAAGAGCGACATATaGTCTATGGTGTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: YCLRVSCQWLEKKEILLPPKSDI*SMVFCS
Trigger: AGAGCAGAACACCATAGACAATATGTCGCTCTTGGG...AGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp TTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATCCCAAGAGCGACATATaGTCTATGGTGTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LAVNGWRRRRSSFLSPIHPKSDI*SMVFCS
Trigger: AGAGCAGAACACCATAGACAATATGTCGCTCTTGGG...ATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp AAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTTGGGGTTTCACCATGTaGGCCAGGCTCGTCTCAAAT +
Preference number: 5 (lower is better)
Translates to: KYCLRVSCQWLEKKEILLWGFTM*ARLVSN
Trigger: ATTTGAGACGAGCCTGGCCAACATGGTGAAACCCCA...AAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp TGTGGTGGTGGGTTCATCCCGGTACTACCCATAAACGAATCAGTAAATGAGACTTGTCTGATGGAAATGTaGCAATGTGGAGTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: CGGGFIPVLPINESVNETCLMEM*QCGVGG
Trigger: CCCTCCTACTCCACATTGCAACATTTCCATCAGACA...AGTCTCATTTACTGATTCGTTTATGGGTAGTACCGGGATGAACCCACCACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359478.7
CDS-3UTR CAA 90 bp CTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTTTAAGGGAGATGGGAATTaGCAGTTGCTCACACCCTCA +
Preference number: 5 (lower is better)
Translates to: LSMVGEEGDPPSSHPYIFKGDGN*QLLTPS
Trigger: TGAGGGTGTGAGCAACTGCAAATTCCCATCTCCCTT...AAAAATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433590.6
CDS-3UTR CAA 90 bp CTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTTTCCCAAGAGCGACATATaGTCTATGGTGTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LSMVGEEGDPPSSHPYIFPKSDI*SMVFCS
Trigger: AGAGCAGAACACCATAGACAATATGTCGCTCTTGGG...AAAAATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp TGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGAGAAACAGCAGCACCTaGGGTCCCAAGAGCGACATA +
Preference number: 5 (lower is better)
Translates to: WFKKYCLRVSCQWLEKKERNSST*GPKSDI
Trigger: TATGTCGCTCTTGGGACCCAAGGTGCTGCTGTTTCT...CTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp ACATTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGCACATCGTCTCCTCGTaGACTATTGACCCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: TLQKDWFKKYCLRVSCQWHIVSS*TIDPQG
Trigger: CCCCTGGGGGTCAATAGTCAACGAGGAGACGATGTG...CCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR CAA 90 bp TTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGCACATCGTCTCCTCGTaGACTATTGACCCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: LQKDWFKKYCLRVSCQWLHIVSS*TIDPQG
Trigger: CCCCTGGGGGTCAATAGTCAACGAGGAGACGATGTG...CAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR CAA 90 bp CTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTTTGAGCAGATCTCCTTGTaGACGATGTACATACGTCGT +
Preference number: 5 (lower is better)
Translates to: LSMVGEEGDPPSSHPYIFEQISL*TMYIRR
Trigger: ACGACGTATGTACATCGTCAACAAGGAGATCTGCTC...AAAAATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp CTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCACCCATACATTTTTGTTAGCTGTCAATGGTaGGAGAAGAAGGAGATCCTC +
Preference number: 5 (lower is better)
Translates to: LSMVGEEGDPPSSHPYIFVSCQW*EKKEIL
Trigger: GAGGATCTCCTTCTTCTCCAACCATTGACAGCTAAC...AAAAATGTATGGGTGAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS CCA 90 bp TTATTATTCTCTGCTACCAAGTCAGAGGAAATTTTACATTCTACATaGTCCGTACTTGGCCCTACCCTTTGGCCTCTTTCACCCCTGATG +
Preference number: 5 (lower is better)
Translates to: LLFSATKSEEILHST*SVLGPTLWPLSPLM
Trigger: CATCAGGGGTGAAAGAGGCCAAAGGGTAGGGCCAAGTACGGACCATGTAGAATGTAAAATTTCCTCTGACTTGGTAGCAGAGAATAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544889.1
CDS-3UTR CAA 90 bp TCCAAAAGCCACTTGCACAATAATTCGACCGTGCACTTGTTAAGTTGTGAAGATTTTCCACCGAGTCCTTaGGCTGCTGAATGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: SKSHLHNNSTVHLLSCEDFPPSP*AAECVS
Trigger: AGAGACACATTCAGCAGCCAAAGGACTCGGTGGAAA...ATCTTCACAACTTAACAAGTGCACGGTCGAATTATTGTGCAAGTGGCTTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp AAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCCAAGAGCGACATATaGTCTATGGTGTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: KYCLRVSCQWLEKKEILLPKSDI*SMVFCS
Trigger: AGAGCAGAACACCATAGACAATATGTCGCTCTTGGG...AAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp AAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGTGTTTCTGGAGTCGCTaGAGTCACATCGTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: KDWFKKYCLRVSCQWLEKCFWSR*SHIVSS
Trigger: CGAGGAGACGATGTGACTCAAGCGACTCCAGAAACA...CTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR CAA 90 bp TTAAGTTGTGAAGATGAACGAAGTAGCAACTCAAGGAAACGTCAACCAATGGTATGTTTCTGGAGTCGCTaGAGTCACATCGTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LSCEDERSSNSRKRQPMVCFWSR*SHIVSS
Trigger: CGAGGAGACGATGTGACTCAAGCGACTCCAGAAACA...TACCATTGGTTGACGTTTCCTTGAGTTGCTACTTCGTTCATCTTCACAACTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp TTTTCAATGATCACAGACCATTGGGTCTCTGCAAATCCACATTTTCACAGGGAGGAGCAGATCTCCTTGTaGACGATGTACATACGTCGT +
Preference number: 5 (lower is better)
Translates to: FSMITDHWVSANPHFHREEQISL*TMYIRR
Trigger: ACGACGTATGTACATCGTCAACAAGGAGATCTGCTC...CTCCCTGTGAAAATGTGGATTTGCAGAGACCCAATGGTCTGTGATCATTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544211.5
CDS-3UTR CAA 90 bp ACTTACCATGATGTGTCTTATAAGGAAGACTTGCCAGGCAAATTTTCGGGCAAGCGAGAGCAGATCTCCTaGTTGACGATGTACATACGT +
Preference number: 5 (lower is better)
Translates to: TYHDVSYKEDLPGKFSGKREQIS*LTMYIR
Trigger: ACGTATGTACATCGTCAACAAGGAGATCTGCTCTCG...CTTGCCCGAAAATTTGCCTGGCAAGTCTTCCTTATAAGACACATCATGGTAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp AAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCGAGAGCAGATCTCCTaGTTGACGATGTACATACGT +
Preference number: 5 (lower is better)
Translates to: KYCLRVSCQWLEKKEILLREQIS*LTMYIR
Trigger: ACGTATGTACATCGTCAACAAGGAGATCTGCTCTCG...AAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp TGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTCCTCTCGGTAAAAGCTGGACATaGCAAAAGGATTGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: CLRVSCQWLEKKEILLPLGKSWT*QKDWFK
Trigger: CTTAAACCAATCCTTTTGCAATGTCCAGCTTTTACC...GAGAGGAAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp TGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGGAAAGGACTTCAGATTaGGCCTCCGCTGAAACAATG +
Preference number: 5 (lower is better)
Translates to: WFKKYCLRVSCQWLEKKEERTSD*ASAETM
Trigger: CATTGTTTCAGCGGAGGCCAAATCTGAAGTCCTTTC...CTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
CDS-3UTR CAA 90 bp AGACTTGCCAGGCAAATTTTCGGGCAAGCCAGCAAAATAGTTAAAGTAAGAGTACCCAAGAGCGACATATaGTCTATGGTGTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: RLARQIFGQASKIVKVRVPKSDI*SMVFCS
Trigger: AGAGCAGAACACCATAGACAATATGTCGCTCTTGGG...TACTCTTACTTTAACTATTTTGCTGGCTTGCCCGAAAATTTGCCTGGCAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp TTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGTGTTTCTGGAGTCGCTaGAGTCACATCGTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LQKDWFKKYCLRVSCQWLCFWSR*SHIVSS
Trigger: CGAGGAGACGATGTGACTCAAGCGACTCCAGAAACA...CAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000544211.5
CDS-3UTR CAA 90 bp AAAGAAATTTATTTCTCACAGTTCTGGAGGCTGAGAAGTCCAAGAACATGGTGCGAGCAGATCTCCTTGTaGACGATGTACATACGTCGT +
Preference number: 5 (lower is better)
Translates to: KEIYFSQFWRLRSPRTWCEQISL*TMYIRR
Trigger: ACGACGTATGTACATCGTCAACAAGGAGATCTGCTC...GCACCATGTTCTTGGACTTCTCAGCCTCCAGAACTGTGAGAAATAAATTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543467.5
CDS-3UTR CAA 90 bp AAAGAAATTTATTTCTCACAGTTCTGGAGGCTGAGAAGTCCAAGAACATGGTGCCGAGAGCAGATCTCCTaGTTGACGATGTACATACGT +
Preference number: 5 (lower is better)
Translates to: KEIYFSQFWRLRSPRTWCREQIS*LTMYIR
Trigger: ACGTATGTACATCGTCAACAAGGAGATCTGCTCTCG...GCACCATGTTCTTGGACTTCTCAGCCTCCAGAACTGTGAGAAATAAATTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543467.5
CDS-3UTR CAA 90 bp CTCTTTTTCAATGATCACAGACCATTGGGTCTCTGCAAATCCACATTTTCACAGCGAGAGCAGATCTCCTaGTTGACGATGTACATACGT +
Preference number: 5 (lower is better)
Translates to: LFFNDHRPLGLCKSTFSQREQIS*LTMYIR
Trigger: ACGTATGTACATCGTCAACAAGGAGATCTGCTCTCG...CTGTGAAAATGTGGATTTGCAGAGACCCAATGGTCTGTGATCATTGAAAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544211.5
CDS-3UTR CAA 90 bp AAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTAATGATCACAGACCATaGGGTCTCTGCAAATCCACA +
Preference number: 5 (lower is better)
Translates to: KYCLRVSCQWLEKKEILLNDHRP*GLCKST
Trigger: TGTGGATTTGCAGAGACCCAATGGTCTGTGATCATT...AAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp TGTGGTGGTGGGTTCATCCCGGTACTACCCATAAACGAATCAGTAAATGAGACTAATTCGACCGTGCACTaGTTAAGTTGTGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: CGGGFIPVLPINESVNETNSTVH*LSCEDE
Trigger: TTCATCTTCACAACTTAACAAGTGCACGGTCGAATT...AGTCTCATTTACTGATTCGTTTATGGGTAGTACCGGGATGAACCCACCACCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp ACATTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTGGGGTTTCACCATGTaGGCCAGGCTCGTCTCAAAT +
Preference number: 5 (lower is better)
Translates to: TLQKDWFKKYCLRVSCQWWGFTM*ARLVSN
Trigger: ATTTGAGACGAGCCTGGCCAACATGGTGAAACCCCA...CCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp AAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGGAGCAGATCTCCTTGTaGACGATGTACATACGTCGT +
Preference number: 5 (lower is better)
Translates to: KDWFKKYCLRVSCQWLEKEQISL*TMYIRR
Trigger: ACGACGTATGTACATCGTCAACAAGGAGATCTGCTC...CTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp TTAAGTTGTGAAGATGAACGAAGTAGCAACTCAAGGAAACGTCAACCAATGGTAGAGCAGATCTCCTTGTaGACGATGTACATACGTCGT +
Preference number: 5 (lower is better)
Translates to: LSCEDERSSNSRKRQPMVEQISL*TMYIRR
Trigger: ACGACGTATGTACATCGTCAACAAGGAGATCTGCTC...TACCATTGGTTGACGTTTCCTTGAGTTGCTACTTCGTTCATCTTCACAACTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp AAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGCGAGAGCAGATCTCCTaGTTGACGATGTACATACGT +
Preference number: 5 (lower is better)
Translates to: KDWFKKYCLRVSCQWLEKREQIS*LTMYIR
Trigger: ACGTATGTACATCGTCAACAAGGAGATCTGCTCTCG...CTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp AAAGAAATTTATTTCTCACAGTTCTGGAGGCTGAGAAGTCCAAGAACATGGTGCAATGATCACAGACCATaGGGTCTCTGCAAATCCACA +
Preference number: 5 (lower is better)
Translates to: KEIYFSQFWRLRSPRTWCNDHRP*GLCKST
Trigger: TGTGGATTTGCAGAGACCCAATGGTCTGTGATCATT...GCACCATGTTCTTGGACTTCTCAGCCTCCAGAACTGTGAGAAATAAATTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543467.5
CDS-3UTR CAA 90 bp CAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGGTTAGCTGTCAATGGTaGGAGAAGAAGGAGATCCTC +
Preference number: 5 (lower is better)
Translates to: QKDWFKKYCLRVSCQWLEVSCQW*EKKEIL
Trigger: GAGGATCTCCTTCTTCTCCAACCATTGACAGCTAAC...CTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp TGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGTCTTATAAGGAAGACTaGCCAGGCAAATTTTCGGGC +
Preference number: 5 (lower is better)
Translates to: WFKKYCLRVSCQWLEKKESYKED*PGKFSG
Trigger: GCCCGAAAATTTGCCTGGCAAGTCTTCCTTATAAGA...CTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp TGTGGTGGTGGGTTCATCCCGGTACTACCCATAAACGAATCAGTAAATGAGACTACTGTCATATATAACTaGTTGTCTCCTAGCTCCTAT +
Preference number: 5 (lower is better)
Translates to: CGGGFIPVLPINESVNETTVIYN*LSPSSY
Trigger: ATAGGAGCTAGGAGACAACAAGTTATATATGACAGT...AGTCTCATTTACTGATTCGTTTATGGGTAGTACCGGGATGAACCCACCACCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359478.7
CDS-3UTR CAA 90 bp TGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATATCAGAGAAAGGACTTCAGATTaGGCCTCCGCTGAAACAATG +
Preference number: 5 (lower is better)
Translates to: WLAQIDKDSFFNPKIYIRERTSD*ASAETM
Trigger: CATTGTTTCAGCGGAGGCCAAATCTGAAGTCCTTTC...TCTGATATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
CDS-3UTR CAA 90 bp AAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCCTCCTTATTAAGTTGTCTAATTaGCTTTGTGGTGGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: KYCLRVSCQWLEKKEILLIKLSN*LCGGGF
Trigger: GAACCCACCACCACAAAGCAAATTAGACAACTTAAT...AAGGAGGATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp CAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGTTTTCTTCTATTCCATaGTGGACTGCTACCCTCACC +
Preference number: 5 (lower is better)
Translates to: QKDWFKKYCLRVSCQWLEFSSIP*WTATLT
Trigger: GGTGAGGGTAGCAGTCCACAATGGAATAGAAGAAAA...CTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359478.7
CDS-3UTR CAA 90 bp TGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATATCAGAGATGGGAATTTGCAGTaGCTCACACCCTCATTCCAA +
Preference number: 5 (lower is better)
Translates to: WLAQIDKDSFFNPKIYIRDGNLQ*LTPSFQ
Trigger: TTGGAATGAGGGTGTGAGCAACTGCAAATTCCCATC...TCTGATATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433590.6
CDS-3UTR CAA 90 bp ATTCTATGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATCCCAAGAGCGACATATaGTCTATGGTGTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ILWLAQIDKDSFFNPKIYPKSDI*SMVFCS
Trigger: AGAGCAGAACACCATAGACAATATGTCGCTCTTGGG...ATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCATAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
CDS-3UTR CAA 90 bp TTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGAATGATCACAGACCATaGGGTCTCTGCAAATCCACA +
Preference number: 5 (lower is better)
Translates to: LQKDWFKKYCLRVSCQWLNDHRP*GLCKST
Trigger: TGTGGATTTGCAGAGACCCAATGGTCTGTGATCATT...CAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp ACATTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGAATGATCACAGACCATaGGGTCTCTGCAAATCCACA +
Preference number: 5 (lower is better)
Translates to: TLQKDWFKKYCLRVSCQWNDHRP*GLCKST
Trigger: TGTGGATTTGCAGAGACCCAATGGTCTGTGATCATT...CCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp TGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGGGTAAAAGCTGGACATaGCAAAAGGATTGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: WFKKYCLRVSCQWLEKKEGKSWT*QKDWFK
Trigger: CTTAAACCAATCCTTTTGCAATGTCCAGCTTTTACC...CTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp TTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGTCTTATAAGGAAGACTaGCCAGGCAAATTTTCGGGC +
Preference number: 5 (lower is better)
Translates to: LQKDWFKKYCLRVSCQWLSYKED*PGKFSG
Trigger: GCCCGAAAATTTGCCTGGCAAGTCTTCCTTATAAGA...CAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp TTAAGTTGTGAAGATGAACGAAGTAGCAACTCAAGGAAACGTCAACCAATGGTAGGTAAAAGCTGGACATaGCAAAAGGATTGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: LSCEDERSSNSRKRQPMVGKSWT*QKDWFK
Trigger: CTTAAACCAATCCTTTTGCAATGTCCAGCTTTTACC...TACCATTGGTTGACGTTTCCTTGAGTTGCTACTTCGTTCATCTTCACAACTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp TTAAGTTGTGAAGATGAACGAAGTAGCAACTCAAGGAAACGTCAACCAATGGTAATTAAGTTGTCTAATTaGCTTTGTGGTGGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: LSCEDERSSNSRKRQPMVIKLSN*LCGGGF
Trigger: GAACCCACCACCACAAAGCAAATTAGACAACTTAAT...TACCATTGGTTGACGTTTCCTTGAGTTGCTACTTCGTTCATCTTCACAACTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp CAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAATTCGACCGTGCACTaGTTAAGTTGTGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: QKDWFKKYCLRVSCQWLENSTVH*LSCEDE
Trigger: TTCATCTTCACAACTTAACAAGTGCACGGTCGAATT...CTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp TGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATATCAGAATATCCAAAAGCCACTaGCACAATAATTCGACCGTG +
Preference number: 5 (lower is better)
Translates to: WLAQIDKDSFFNPKIYIRISKSH*HNNSTV
Trigger: CACGGTCGAATTATTGTGCAAGTGGCTTTTGGATAT...TCTGATATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359478.7
ENST00000433590.6
CDS-3UTR CAA 90 bp TGGTTAGCCCAAATAGACAAAGATAGCTTCTTCAACCCTAAGATCTATATCAGAGGTAAAAGCTGGACATaGCAAAAGGATTGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: WLAQIDKDSFFNPKIYIRGKSWT*QKDWFK
Trigger: CTTAAACCAATCCTTTTGCAATGTCCAGCTTTTACC...TCTGATATAGATCTTAGGGTTGAAGAAGCTATCTTTGTCTATTTGGGCTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000543369.5
CDS-3UTR CAA 90 bp TTGCAAAAGGATTGGTTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGGTAAAAGCTGGACATaGCAAAAGGATTGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: LQKDWFKKYCLRVSCQWLGKSWT*QKDWFK
Trigger: CTTAAACCAATCCTTTTGCAATGTCCAGCTTTTACC...CAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAACCAATCCTTTTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000543369.5
ENST00000544211.5
CDS-3UTR CAA 90 bp TTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCTCTCCTAGCTCCTATTaGAATTCCATTGGCTTTTAT +
Preference number: 5 (lower is better)
Translates to: FKKYCLRVSCQWLEKKEISPSSY*NSIGFY
Trigger: ATAAAAGCCAATGGAATTCAAATAGGAGCTAGGAGA...GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359478.7
CDS-3UTR CAA 90 bp TTTAAGAAATACTGTCTAAGGGTTAGCTGTCAATGGTTGGAGAAGAAGGAGATCGTCATATATAACTTGTaGTCTCCTAGCTCCTATTTG +
Preference number: 5 (lower is better)
Translates to: FKKYCLRVSCQWLEKKEIVIYNL*SPSSYL
Trigger: CAAATAGGAGCTAGGAGACAACAAGTTATATATGAC...GATCTCCTTCTTCTCCAACCATTGACAGCTAACCCTTAGACAGTATTTCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359478.7
CDS TCA 72 bp GAGCGACGGAGTCTCCTAGGGGGCAGACCAGCCATCTaGCGGCAAAGCTCATCTTTCATAGCTTCGTGTTCC +
Preference number: 6 (lower is better)
Translates to: ERRSLLGGRPAI*RQSSSFIASCS
Trigger: GGAACACGAAGCTATGAAAGATGAGCTTTGCCGTCAGATGGCTGGTCTGCCCCCTAGGAGACTCCGTCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535411.5
ENST00000538694.5
ENST00000540087.5
ENST00000543369.5
ENST00000543467.5
CDS CCA 72 bp ATCCTTCAGCAGCTGCACACTATCCAGAATGGGCTCTaGGGAAAGCCTAGAATGGCCCTGATGACCTGGGGG +
Preference number: 6 (lower is better)
Translates to: ILQQLHTIQNGL*GKPRMALMTWG
Trigger: CCCCCAGGTCATCAGGGCCATTCTAGGCTTTCCCCAGAGCCCATTCTGGATAGTGTGCAGCTGCTGAAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537128.1
CDS GCA 72 bp GACCCCCAGGGGTATCCAGTCAGAGGTGATGATGAATaGAGCAAGAAACAGCAGCACCTTGGGTCCCAAGAG +
Preference number: 6 (lower is better)
Translates to: DPQGYPVRGDDE*SKKQQHLGSQE
Trigger: CTCTTGGGACCCAAGGTGCTGCTGTTTCTTGCTGCATTCATCATCACCTCTGACTGGATACCCCTGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000534833.5
ENST00000535336.5
ENST00000537009.5
ENST00000537128.1
ENST00000538107.5
ENST00000540087.5
ENST00000544211.5
ENST00000544889.1
CDS TCA 72 bp TGGAAAGGACTTCAGATTTGGCCTCCGCTGAAACAATaGGATGAGGGAGAGCAAGAAAGCCAGGCTAGGCGT +
Preference number: 6 (lower is better)
Translates to: WKGLQIWPPLKQ*DEGEQESQARR
Trigger: ACGCCTAGCCTGGCTTTCTTGCTCTCCCTCATCTCATTGTTTCAGCGGAGGCCAAATCTGAAGTCCTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000537128.1
ENST00000538107.5
CDS GCA 72 bp AGTCGCTTGAGTCACATCGTCAGAGGTGATGATGAATaGAGCAAGAAACAGCAGCACCTTGGGTCCCAAGAG +
Preference number: 6 (lower is better)
Translates to: SRLSHIVRGDDE*SKKQQHLGSQE
Trigger: CTCTTGGGACCCAAGGTGCTGCTGTTTCTTGCTGCATTCATCATCACCTCTGACGATGTGACTCAAGCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543369.5
CDS TCA 72 bp TGGTGTTCTGCTCTTTCCACCGAGTCCTTTGGCTGCTaGATGTGTCTCTCTCCTCTTACGCTGTTCCTACTT +
Preference number: 6 (lower is better)
Translates to: WCSALSTESFGC*MCLSPLTLFLL
Trigger: AAGTAGGAACAGCGTAAGAGGAGAGAGACACATTCAGCAGCCAAAGGACTCGGTGGAAAGAGCAGAACACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000537128.1
ENST00000538107.5
CDS CAA 72 bp ATTGTCTATGGTGTTCTGCTCTTTCCACCGAGTCCTTaGGCTGCTGAATGTGTCTCTCTCCTCTTACGCTGT +
Preference number: 6 (lower is better)
Translates to: IVYGVLLFPPSP*AAECVSLLLRC
Trigger: ACAGCGTAAGAGGAGAGAGACACATTCAGCAGCCAAAGGACTCGGTGGAAAGAGCAGAACACCATAGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000537009.5
ENST00000537128.1
ENST00000538107.5
CDS CAA 90 bp GAGCGACATATTGTCTATGGTGTTCTGCTCTTTCCACCGAGTCCTTaGGCTGCTGAATGTGTCTCTCTCCTCTTACGCTGTTCCTACTTT +
Preference number: 6 (lower is better)
Translates to: ERHIVYGVLLFPPSP*AAECVSLLLRCSYF
Trigger: AAAGTAGGAACAGCGTAAGAGGAGAGAGACACATTCAGCAGCCAAAGGACTCGGTGGAAAGAGCAGAACACCATAGACAATATGTCGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535336.5
ENST00000537128.1
ENST00000538107.5
CDS CAA 90 bp ATCCAGTCAGAGGTGATGATGAATGCAGCAAGAAACAGCAGCACCTaGGGTCCCAAGAGCGACATATTGTCTATGGTGTTCTGCTCTTTC +
Preference number: 6 (lower is better)
Translates to: IQSEVMMNAARNSST*GPKSDILSMVFCSF
Trigger: GAAAGAGCAGAACACCATAGACAATATGTCGCTCTTGGGACCCAAGGTGCTGCTGTTTCTTGCTGCATTCATCATCACCTCTGACTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000534833.5
ENST00000535336.5
ENST00000537009.5
ENST00000537128.1
ENST00000538107.5
ENST00000544211.5
CDS CAA 90 bp ACATCGTCAGAGGTGATGATGAATGCAGCAAGAAACAGCAGCACCTaGGGTCCCAAGAGCGACATATTGTCTATGGTGTTCTGCTCTTTC +
Preference number: 6 (lower is better)
Translates to: TSSEVMMNAARNSST*GPKSDILSMVFCSF
Trigger: GAAAGAGCAGAACACCATAGACAATATGTCGCTCTTGGGACCCAAGGTGCTGCTGTTTCTTGCTGCATTCATCATCACCTCTGACGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543369.5
CDS CAA 90 bp CATCTGCTCATCTTGGCGTCTCCTTCATCAGAATTCCACGGTTATTaGGGAGGTCTGCTCAAGACTAAGTTCAGTGACATTCCCCATTGC +
Preference number: 6 (lower is better)
Translates to: HLLILASPSSEFHGY*GGLLKTKFSDIPHC
Trigger: GCAATGGGGAATGTCACTGAACTTAGTCTTGAGCAGACCTCCCAAATAACCGTGGAATTCTGATGAAGGAGACGCCAAGATGAGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544889.1
CDS GCA 72 bp CTCCTTCATCAGAATTCCACGGTTATTTGGGAGGTCTaGTCAAGACTAAGTTCAGTGACATTCCCCATTGCC +
Preference number: 6 (lower is better)
Translates to: LLHQNSTVIWEV*SRLSSVTFPIA
Trigger: GGCAATGGGGAATGTCACTGAACTTAGTCTTGAGCAGACCTCCCAAATAACCGTGGAATTCTGATGAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544889.1
CDS CAA 72 bp TTTACATTCTACATGGTCCGTACTTGGCCCTACCCTTaGGCCTCTTTCACCCCTGATGTGGAATCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: FTFYMVRTWPYP*ASFTPDVESSF
Trigger: AAAGGAAGATTCCACATCAGGGGTGAAAGAGGCCAAAGGGTAGGGCCAAGTACGGACCATGTAGAATGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544889.1
CDS CAA 90 bp AGAGGAAATTTTACATTCTACATGGTCCGTACTTGGCCCTACCCTTaGGCCTCTTTCACCCCTGATGTGGAATCTTCCTTTCTCATATGC +
Preference number: 6 (lower is better)
Translates to: RGNFTFYMVRTWPYP*ASFTPDVESSFLIC
Trigger: GCATATGAGAAAGGAAGATTCCACATCAGGGGTGAAAGAGGCCAAAGGGTAGGGCCAAGTACGGACCATGTAGAATGTAAAATTTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544889.1
CDS CCA 72 bp TCTTGGCGTCTCCTTCATCAGAATTCCACGGTTATTTaGGAGGTCTGCTCAAGACTAAGTTCAGTGACATTC +
Preference number: 6 (lower is better)
Translates to: SWRLLHQNSTVI*EVCSRLSSVTF
Trigger: GAATGTCACTGAACTTAGTCTTGAGCAGACCTCCCAAATAACCGTGGAATTCTGATGAAGGAGACGCCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544889.1
CDS CCA 72 bp ATCATTCACCAGATTAGGATCTTCTGTGAATGTTTCTaGAGTCGCTTGAGTCACATCGTCTCCTCGTTGACT +
Preference number: 6 (lower is better)
Translates to: IIHQIRIFCECF*SRLSHIVSSLT
Trigger: AGTCAACGAGGAGACGATGTGACTCAAGCGACTCCAGAAACATTCACAGAAGATCCTAATCTGGTGAATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000534833.5
ENST00000535336.5
ENST00000535411.5
ENST00000537009.5
ENST00000537128.1
ENST00000538107.5
ENST00000540087.5
ENST00000544211.5
ENST00000544889.1
CDS CAA 72 bp TGTTCCTTACAGACAAGACGAGAGCAGATCTCCTTGTaGACGATGTACATACGTCGTAAACTGGTGAAGCAT +
Preference number: 6 (lower is better)
Translates to: CSLQTRREQISL*TMYIRRKLVKH
Trigger: ATGCTTCACCAGTTTACGACGTATGTACATCGTCAACAAGGAGATCTGCTCTCGTCTTGTCTGTAAGGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359478.7
ENST00000396549.6
ENST00000433590.6
ENST00000535411.5
ENST00000537009.5
ENST00000538694.5
ENST00000540087.5
ENST00000543369.5
ENST00000543467.5
ENST00000544211.5
CDS CAA 72 bp ATCTTGGCGTCTCCTTCATCAGAATTCCACGGTTATTaGGGAGGTCTGCTCAAGACTAAGTTCAGTGACATT +
Preference number: 6 (lower is better)
Translates to: ILASPSSEFHGY*GGLLKTKFSDI
Trigger: AATGTCACTGAACTTAGTCTTGAGCAGACCTCCCAAATAACCGTGGAATTCTGATGAAGGAGACGCCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544889.1
CDS CCA 72 bp ATCATTCACCAGATTAGGATCTTCTGTGAATGTTTCTaGAGTCGCTTGAGTCACATCGTCAGAGGTGATGAT +
Preference number: 6 (lower is better)
Translates to: IIHQIRIFCECF*SRLSHIVRGDD
Trigger: ATCATCACCTCTGACGATGTGACTCAAGCGACTCCAGAAACATTCACAGAAGATCCTAATCTGGTGAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543369.5
CDS CAA 72 bp CTCATATGCGTGACTTTTTCATATCATCTGCTCATCTaGGCGTCTCCTTCATCAGAATTCCACGGTTATTTG +
Preference number: 6 (lower is better)
Translates to: LICVTFSYHLLI*ASPSSEFHGYL
Trigger: CAAATAACCGTGGAATTCTGATGAAGGAGACGCCAAGATGAGCAGATGATATGAAAAAGTCACGCATATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544889.1
CDS GCA 72 bp CTTTGGCCCCATCAAAGTTTGCAATTCCATAGTGGGTaGTCATTAAATAGTTATCAACACAGAAACACTACC +
Preference number: 6 (lower is better)
Translates to: LWPHQSLQFHSG*SLNSYQHRNTT
Trigger: GGTAGTGTTTCTGTGTTGATAACTATTTAATGAGCACCCACTATGGAATTGCAAACTTTGATGGGGCCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534833.5