RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MFAP3L (Homo sapiens)

Ensembl gene IDs: ENSG00000198948

Ensembl transcript IDs: ENST00000361618.4, ENST00000393702.7, ENST00000393704.3, ENST00000502832.1, ENST00000504999.1, ENST00000506110.1, ENST00000506764.1, ENST00000507601.1, ENST00000510306.1, ENST00000512698.1, ENST00000514683.1

Found 466 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGTATCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTaGGGAAATTCCAGTCCCATTCACTGCAGGCAGGTGTTTCTCCTT +
Preference number: 1 (lower is better)
Translates to: LVSILHPDVSRTLLY*GNSSPIHCRQVFLL
Trigger: AAGGAGAAACACCTGCCTGCAGTGAATGGGACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGATACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR GCA 90 bp TCCTACCTAAGGGATGAGAGTCTCCTGGTAAGGCTTAGCGGCAAGTaGGTACTACATCTGTATTACAAGGAGCAGCCCCTGATTTTCTTG +
Preference number: 1 (lower is better)
Translates to: SYLRDESLLVRLSGK*VLHLYYKEQPLIFL
Trigger: CAAGAAAATCAGGGGCTGCTCCTTGTAATACAGATGTAGTACGCACTTGCCGCTAAGCCTTACCAGGAGACTCTCATCCCTTAGGTAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CCA 90 bp AATTCCAGTCCCATTCACTGCAGGCAGGTGTTTCTCCTTTTAAAGTaGCATCACTCCTACCTAAGGGATGAGAGTCTCCTGGTAAGGCTT +
Preference number: 1 (lower is better)
Translates to: NSSPIHCRQVFLLLK*HHSYLRDESLLVRL
Trigger: AAGCCTTACCAGGAGACTCTCATCCCTTAGGTAGGAGTGATGCCACTTTAAAAGGAGAAACACCTGCCTGCAGTGAATGGGACTGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 90 bp TCATTATCACATAGACACCTTCTGTCTGGTATCAATTCTGCACCCTaGTGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTCCCAT +
Preference number: 1 (lower is better)
Translates to: SLSHRHLLSGINSAP*CFSHPSLLGKFQSH
Trigger: ATGGGACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGATACCAGACAGAAGGTGTCTATGTGATAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR GCA 90 bp GCAGCTGGAATTGGTGTTTCTACAGTCAAGTTAATTTGTGTTGGCTaGACGGGGCTTAGAGCATGCTGTTCCAAACATGCAAATGTCCTT +
Preference number: 1 (lower is better)
Translates to: AAGIGVSTVKLICVG*TGLRACCSKHANVL
Trigger: AAGGACATTTGCATGTTTGGAACAGCATGCTCTAAGCCCCGTGCAGCCAACACAAATTAACTTGACTGTAGAAACACCAATTCCAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 90 bp CACCAATGTGATCCATGCAATCTTGGACATCATAACCCCATTACCTaGTGTGGCCACGGCCCCTATGAATTTATTAAGATTACTGTCTCC +
Preference number: 1 (lower is better)
Translates to: HQCDPCNLGHHNPIT*CGHGPYEFIKITVS
Trigger: GGAGACAGTAATCTTAATAAATTCATAGGGGCCGTGGCCACATCAGGTAATGGGGTTATGATGTCCAAGATTGCATGGATCACATTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 90 bp TCATGCAACGGGGGTTGGTTATCCTGGAAGACTGCAAACTTTCTGTaGACTATAAATGTTTCAACTAGAAGGGATCCTGTAGACCCTCGA +
Preference number: 1 (lower is better)
Translates to: SCNGGWLSWKTANFL*TINVSTRRDPVDPR
Trigger: TCGAGGGTCTACAGGATCCCTTCTAGTTGAAACATTTATAGTTCACAGAAAGTTTGCAGTCTTCCAGGATAACCAACCCCCGTTGCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 90 bp AAGGGATCCTGTAGACCCTCGAGTACTACCTGCATATTTTACAGATaGAAAAGATTAAATCCCAGAGAGAGGAAGGGAGTTGTCCAAGGT +
Preference number: 1 (lower is better)
Translates to: KGSCRPSSTTCIFYR*KRLNPRERKGVVQG
Trigger: ACCTTGGACAACTCCCTTCCTCTCTCTGGGATTTAATCTTTTTCATCTGTAAAATATGCAGGTAGTACTCGAGGGTCTACAGGATCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR GCA 90 bp CCACTTTTAGCTTATTATCACTATTCAATGTCTAGGTGGAATGGATaGCTTCTCCTTTCCATGTGGAAACCTACACATGGGTTTGGGTGG +
Preference number: 1 (lower is better)
Translates to: PLLAYYHYSMSRWNG*LLLSMWKPTHGFGW
Trigger: CCACCCAAACCCATGTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAATAGTGATAATAAGCTAAAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CCA 90 bp CTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTaGAAGCCAATATTCTATAACCTACAGGAATCCACTGAATCTGAT +
Preference number: 1 (lower is better)
Translates to: LVICHPTAYGPCKPV*KPIFYNLQESTESD
Trigger: ATCAGATTCAGTGGATTCCTGTAGGTTATAGAATATTGGCTTCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 90 bp CCAAGAAGGCATCACCAATTAAGGTATTTGGCAGAGATCAGCCTCTaGAACTCATTATCACATAGACACCTTCTGTCTGGTATCAATTCT +
Preference number: 1 (lower is better)
Translates to: PRRHHQLRYLAEISL*NSLSHRHLLSGINS
Trigger: AGAATTGATACCAGACAGAAGGTGTCTATGTGATAATGAGTTTCAGAGGCTGATCTCTGCCAAATACCTTAATTGGTGATGCCTTCTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 90 bp GTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCTaGGCTCACCAAAAGGCTCACTCAATCAGACAGGTAAACACATTT +
Preference number: 1 (lower is better)
Translates to: VWVYLTFYNLPLHLS*AHQKAHSIRQVNTF
Trigger: AAATGTGTTTACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 90 bp CTTTCCATGTGGAAACCTACACATGGGTTTGGGTGGAATGACAACTaGATAGGATGGGGTAACATCCATACAGTATCACAAAATGAACTT +
Preference number: 1 (lower is better)
Translates to: LSMWKPTHGFGWNDN*IGWGNIHTVSQNEL
Trigger: AAGTTCATTTTGTGATACTGTATGGATGTTACCCCATCCTATTCAGTTGTCATTCCACCCAAACCCATGTGTAGGTTTCCACATGGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CCA 90 bp AAAATCTGCCCACTTTTAGCTTATTATCACTATTCAATGTCTAGGTaGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACATGGG +
Preference number: 1 (lower is better)
Translates to: KICPLLAYYHYSMSR*NGCLLLSMWKPTHG
Trigger: CCCATGTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAATAGTGATAATAAGCTAAAAGTGGGCAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 90 bp TTCTTGCAGGACTGCATAATTATTCAACAGTTTTGGCATAAAATCTaGTGGCACAGTTCCCTTTGCTATTACCCTAACCTTTCGCTTTCC +
Preference number: 1 (lower is better)
Translates to: FLQDCIIIQQFWHKI*WHSSLCYYPNLSLS
Trigger: GGAAAGCGAAAGGTTAGGGTAATAGCAAAGGGAACTGTGCCATCAGATTTTATGCCAAAACTGTTGAATAATTATGCAGTCCTGCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CCA 90 bp CCTCTGTTGTTGCTTTGGGCATATAAACCCATGGTAATGAATCTGTaGACCTCCATGACAACTGGAAAATTTTTATATTCTAAGAGGTGG +
Preference number: 1 (lower is better)
Translates to: PLLLLWAYKPMVMNL*TSMTTGKFLYSKRW
Trigger: CCACCTCTTAGAATATAAAAATTTTCCAGTTGTCATGGAGGTCCACAGATTCATTACCATGGGTTTATATGCCCAAAGCAACAACAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CCA 90 bp TCCATACAGTATCACAAAATGAACTTAAGTCCTCTGTTGTTGCTTTaGGCATATAAACCCATGGTAATGAATCTGTGGACCTCCATGACA +
Preference number: 1 (lower is better)
Translates to: SIQYHKMNLSPLLLL*AYKPMVMNLWTSMT
Trigger: TGTCATGGAGGTCCACAGATTCATTACCATGGGTTTATATGCCCAAAGCAACAACAGAGGACTTAAGTTCATTTTGTGATACTGTATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR GCA 90 bp AACATTCTTTGGCCGCATATTTCTGCTCTTGCTCCACTGAAAATCTaGCCACTTTTAGCTTATTATCACTATTCAATGTCTAGGTGGAAT +
Preference number: 1 (lower is better)
Translates to: NILWPHISALAPLKI*PLLAYYHYSMSRWN
Trigger: ATTCCACCTAGACATTGAATAGTGATAATAAGCTAAAAGTGGGCAGATTTTCAGTGGAGCAAGAGCAGAAATATGCGGCCAAAGAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 90 bp ATCATTCTGGACATAATGACACAGCACAATAATGCTTGGGATGGATaGGACATTCAGAGATTTTTAGAGCGATTTCTAGAAGCTATATAT +
Preference number: 1 (lower is better)
Translates to: IILDIMTQHNNAWDG*DIQRFLERFLEAIY
Trigger: ATATATAGCTTCTAGAAATCGCTCTAAAAATCTCTGAATGTCTCATCCATCCCAAGCATTATTGTGCTGTGTCATTATGTCCAGAATGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR TCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTCTCCTACCTAAGGGATaGGAGTCTCCTGGTAAGGCT +
Preference number: 2 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSLLPKG*ESPGKA
Trigger: AGCCTTACCAGGAGACTCTCATCCCTTAGGTAGGAG...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR TCA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGACAGCCCTGGTACTGGTaGCTGATACCAAAGTCTCTG +
Preference number: 2 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGQPWYW*LIPKSL
Trigger: CAGAGACTTTGGTATCAGTCACCAGTACCAGGGCTG...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CCA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGACGCACCCTTCTCTACTaGGGAAATTCCAGTCCCATT +
Preference number: 2 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGRTLLY*GNSSPI
Trigger: AATGGGACTGGAATTTCCCCAGTAGAGAAGGGTGCG...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR TCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACCTCCTACCTAAGGGATaGGAGTCTCCTGGTAAGGCT +
Preference number: 2 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHLLPKG*ESPGKA
Trigger: AGCCTTACCAGGAGACTCTCATCCCTTAGGTAGGAG...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR TCA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGATCAATTCTGCACCCTaGTGTTTCTCGCACCCTTCT +
Preference number: 2 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQINSAP*CFSHPS
Trigger: AGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGAT...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR TCA 90 bp TCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGACAGGTACTGGACAGGGTTCTTaGACTCAGAATATCTTACAG +
Preference number: 2 (lower is better)
Translates to: SPSTSQLSSPKGSLNQTGTGQGS*TQNILQ
Trigger: CTGTAAGATATTCTGAGTTCAAGAACCCTGTCCAGT...ACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR TCA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCCAGCCCTGGTACTGGTaGCTGATACCAAAGTCTCTG +
Preference number: 2 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSQPWYW*LIPKSL
Trigger: CAGAGACTTTGGTATCAGTCACCAGTACCAGGGCTG...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CCA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCCAATGCAGGGGGCACTaGACAGGGTTCTTGAACTCA +
Preference number: 2 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSQCRGH*TGFLNS
Trigger: TGAGTTCAAGAACCCTGTCCAGTGCCCCCTGCATTG...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CCA 90 bp AGCTATGCAGTTCATAAAAGTGGACCTGGTTATATGTCATCCAACAGCATATGGCAATGCAGGGGGCACTaGACAGGGTTCTTGAACTCA +
Preference number: 2 (lower is better)
Translates to: SYAVHKSGPGYMSSNSIWQCRGH*TGFLNS
Trigger: TGAGTTCAAGAACCCTGTCCAGTGCCCCCTGCATTG...CCATATGCTGTTGGATGACATATAACCAGGTCCACTTTTATGAACTGCATAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR TCA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGATCAATTCTGCACCCTaGTGTTTCTCGCACCCTTCT +
Preference number: 2 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLINSAP*CFSHPS
Trigger: AGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGAT...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR TCA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGGCAGAGATCAGCCTCTaGAACTCATTATCACATAGA +
Preference number: 2 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQAEISL*NSLSHR
Trigger: TCTATGTGATAATGAGTTTCAGAGGCTGATCTCTGC...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR GCA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGCCACGTACGTGCATTTaGTATTGTAGCAGACCTATA +
Preference number: 2 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQPRTCI*YCSRPI
Trigger: TATAGGTCTGCTACAATAGCAAATGCACGTACGTGG...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CCA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGTCATCCAACAGCATATaGTCCCTGCAAGCCTGTTTG +
Preference number: 2 (lower is better)
Translates to: VFCISYSSRRASHFIKKLSSNSI*SLQACL
Trigger: CAAACAGGCTTGCAGGGACCATATGCTGTTGGATGA...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CAA 90 bp TGGACAGGGTTCTTGAACTCAGAATATCTTACAGTGGTGTACTCTTaGCCAAGAAGGCATCACCAATTAAGGTATTTGGCAGAGATCAGC +
Preference number: 2 (lower is better)
Translates to: WTGFLNSEYLTVVYS*PRRHHQLRYLAEIS
Trigger: GCTGATCTCTGCCAAATACCTTAATTGGTGATGCCTTCTTGGCAAAGAGTACACCACTGTAAGATATTCTGAGTTCAAGAACCCTGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR TCA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGAATGACAAATGTAATGTaGCTTGTAGATATCAGCCCT +
Preference number: 2 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGMTNVM*LVDISP
Trigger: AGGGCTGATATCTACAAGTCACATTACATTTGTCAT...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR GCA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGAGGCTTAGCGGCAAGTaGGTACTACATCTGTATTAC +
Preference number: 2 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLRLSGK*VLHLYY
Trigger: GTAATACAGATGTAGTACGCACTTGCCGCTAAGCCT...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR GCA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTCTGGTATCAATTCTaGACCCTGATGTTTCTCGCA +
Preference number: 2 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLVWYQF*TLMFLA
Trigger: TGCGAGAAACATCAGGGTGCAGAATTGATACCAGAC...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CCA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACCGCACCCTTCTCTACTaGGGAAATTCCAGTCCCATT +
Preference number: 2 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNRTLLY*GNSSPI
Trigger: AATGGGACTGGAATTTCCCCAGTAGAGAAGGGTGCG...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR TCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAAGGGTGGAATGACAACTaGATAGGATGGGGTAACATC +
Preference number: 2 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQGWNDN*IGWGNI
Trigger: GATGTTACCCCATCCTATTCAGTTGTCATTCCACCC...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR GCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATAGGCTTAGCGGCAAGTaGGTACTACATCTGTATTAC +
Preference number: 2 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYRLSGK*VLHLYY
Trigger: GTAATACAGATGTAGTACGCACTTGCCGCTAAGCCT...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACTTTCTCCTTTTAAAGTaGCATCACTCCTACCTAAGG +
Preference number: 2 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHFLLLK*HHSYLR
Trigger: CCTTAGGTAGGAGTGATGCCACTTTAAAAGGAGAAA...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CCA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGATGGTAATGAATCTGTaGACCTCCATGACAACTGGA +
Preference number: 2 (lower is better)
Translates to: VFCISYSSRRASHFIKKLMVMNL*TSMTTG
Trigger: TCCAGTTGTCATGGAGGTCCACAGATTCATTACCAT...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CAA 90 bp GGGGTAACATCCATACAGTATCACAAAATGAACTTAAGTCCTCTGTaGTTGCTTTGGGCATATAAACCCATGGTAATGAATCTGTGGACC +
Preference number: 2 (lower is better)
Translates to: GVTSIQYHKMNLSPL*LLWAYKPMVMNLWT
Trigger: GGTCCACAGATTCATTACCATGGGTTTATATGCCCAAAGCAACAACAGAGGACTTAAGTTCATTTTGTGATACTGTATGGATGTTACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR TCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACATGACAAATGTAATGTaGCTTGTAGATATCAGCCCT +
Preference number: 2 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHMTNVM*LVDISP
Trigger: AGGGCTGATATCTACAAGTCACATTACATTTGTCAT...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR TCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACAGGTGGACCAAGAGATaGAAGCAAAAATCTTTAAAG +
Preference number: 2 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHRWTKR*KQKSLK
Trigger: CTTTAAAGATTTTTGCTTTCATCTCTTGGTCCACCT...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR GCA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACGTCTGGTATCAATTCTaGACCCTGATGTTTCTCGCA +
Preference number: 2 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNVWYQF*TLMFLA
Trigger: TGCGAGAAACATCAGGGTGCAGAATTGATACCAGAC...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR GCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTCAGTGGTGTACTCTTTaGCAAGAAGGCATCACCAAT +
Preference number: 2 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFQWCTL*QEGITN
Trigger: ATTGGTGATGCCTTCTTGGCAAAGAGTACACCACTG...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR GCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTTGGCACAGTTCCCTTTaGTATTACCCTAACCTTTCG +
Preference number: 2 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFWHSSL*YYPNLS
Trigger: CGAAAGGTTAGGGTAATAGCAAAGGGAACTGTGCCA...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR GCA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACTTTTTGCTTGTCTCATaGAACGGGGGTTGGTTATCC +
Preference number: 2 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNFLLVS*NGGWLS
Trigger: GGATAACCAACCCCCGTTGCATGAGACAAGCAAAAA...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR GCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTGCATATTTCTGCTCTTaGTCCACTGAAAATCTGCCC +
Preference number: 2 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFAYFCS*STENLP
Trigger: GGGCAGATTTTCAGTGGAGCAAGAGCAGAAATATGC...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACCTTTCATGGGTGGTGTaGGTATATTTAACCTTTTAC +
Preference number: 2 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHLSWVV*VYLTFY
Trigger: GTAAAAGGTTAAATATACCCACACCACCCATGAAAG...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CCA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGTATTCAATGTCTAGGTaGAATGGATGCCTTCTCCTT +
Preference number: 2 (lower is better)
Translates to: VFCISYSSRRASHFIKKLYSMSR*NGCLLL
Trigger: AAGGAGAAGGCATCCATTCCACCTAGACATTGAATA...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CAA 90 bp GTAACATCCATACAGTATCACAAAATGAACTTAAGTCCTCTGTTGTaGCTTTGGGCATATAAACCCATGGTAATGAATCTGTGGACCTCC +
Preference number: 2 (lower is better)
Translates to: VTSIQYHKMNLSPLL*LWAYKPMVMNLWTS
Trigger: GGAGGTCCACAGATTCATTACCATGGGTTTATATGCCCAAAGCAACAACAGAGGACTTAAGTTCATTTTGTGATACTGTATGGATGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR TCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAAACTGGACAGGGTTCTTaGACTCAGAATATCTTACAG +
Preference number: 2 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQTGQGS*TQNILQ
Trigger: CTGTAAGATATTCTGAGTTCAAGAACCCTGTCCAGT...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR TCA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACTTTTGGCATAAAATCTaGTGGCACAGTTCCCTTTGC +
Preference number: 2 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNFWHKI*WHSSLC
Trigger: GCAAAGGGAACTGTGCCATCAGATTTTATGCCAAAA...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CCA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGCAGAATATCTTACAGTaGTGTACTCTTTGCCAAGAA +
Preference number: 2 (lower is better)
Translates to: VFCISYSSRRASHFIKKLQNILQ*CTLCQE
Trigger: TTCTTGGCAAAGAGTACACCACTGTAAGATATTCTG...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CCA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGCTTTCATGGGTGGTGTaGGTATATTTAACCTTTTAC +
Preference number: 2 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLLSWVV*VYLTFY
Trigger: GTAAAAGGTTAAATATACCCACACCACCCATGAAAG...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAACCCTGCAAGCCTGTTTaGAAGCCAATATTCTATAAC +
Preference number: 2 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQPCKPV*KPIFYN
Trigger: GTTATAGAATATTGGCTTCCAAACAGGCTTGCAGGG...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTTGGTTATTGGCACAGTaGGTATTAAGCCTTTGGATG +
Preference number: 2 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFWLLAQ*VLSLWM
Trigger: CATCCAAAGGCTTAATACCCACTGTGCCAATAACCA...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CAA 90 bp ATCTTTAAAGTCATTGTGAAAAGGAGCAAGGATGTGAATATTGGTTaGGTTCTGTGTGACAGTGATACCATTTCAACAGTGCTCAGAGCT +
Preference number: 2 (lower is better)
Translates to: IFKVIVKRSKDVNIG*VLCDSDTISTVLRA
Trigger: AGCTCTGAGCACTGTTGAAATGGTATCACTGTCACACAGAACCAAACCAATATTCACATCCTTGCTCCTTTTCACAATGACTTTAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR TCA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACAAAGGAGCAAGGATGTaGATATTGGTTTGGTTCTGT +
Preference number: 2 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNKGARM*ILVWFC
Trigger: ACAGAACCAAACCAATATTCACATCCTTGCTCCTTT...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR GCA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACAAAAACCCACGTACGTaGATTTGCTATTGTAGCAGA +
Preference number: 2 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNKNPRT*ICYCSR
Trigger: TCTGCTACAATAGCAAATGCACGTACGTGGGTTTTT...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CCA 90 bp AGCTATGCAGTTCATAAAAGTGGACCTGGTTATATGTCATCCAACAGCATATGGCAGAATATCTTACAGTaGTGTACTCTTTGCCAAGAA +
Preference number: 2 (lower is better)
Translates to: SYAVHKSGPGYMSSNSIWQNILQ*CTLCQE
Trigger: TTCTTGGCAAAGAGTACACCACTGTAAGATATTCTG...CCATATGCTGTTGGATGACATATAACCAGGTCCACTTTTATGAACTGCATAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTTGGGTATTAAGCCTTTaGATGACTAATTTTGTCTTC +
Preference number: 2 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFWVLSL*MTNFVF
Trigger: GAAGACAAAATTAGTCATCCAAAGGCTTAATACCCA...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR GCA 72 bp AGGGATGAGAGTCTCCTGGTAAGGCTTAGCGGCAAGTaGGTACTACATCTGTATTACAAGGAGCAGCCCCTG +
Preference number: 3 (lower is better)
Translates to: RDESLLVRLSGK*VLHLYYKEQPL
Trigger: CAGGGGCTGCTCCTTGTAATACAGATGTAGTACGCACTTGCCGCTAAGCCTTACCAGGAGACTCTCATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CCA 72 bp ATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTaGGGAAATTCCAGTCCCATTCACTGCAGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: ILHPDVSRTLLY*GNSSPIHCRQV
Trigger: CACCTGCCTGCAGTGAATGGGACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 72 bp AGTTGTCCAAGGTCACCTCCTCAGATGGTGACAGAGTaGGGACTAAACATCTGGGTCTGCTCTCATCACCAA +
Preference number: 3 (lower is better)
Translates to: SCPRSPPQMVTE*GLNIWVCSHHQ
Trigger: TTGGTGATGAGAGCAGACCCAGATGTTTAGTCCTCACTCTGTCACCATCTGAGGAGGTGACCTTGGACAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 72 bp CATAGACACCTTCTGTCTGGTATCAATTCTGCACCCTaGTGTTTCTCGCACCCTTCTCTACTGGGGAAATTC +
Preference number: 3 (lower is better)
Translates to: HRHLLSGINSAP*CFSHPSLLGKF
Trigger: GAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGATACCAGACAGAAGGTGTCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR GCA 72 bp AACTGCCCAAATGAGTCCAATGTGCACGAGTGTGTATaGACACACGTTCAGTCACACTCGCATGAATTTCTA +
Preference number: 3 (lower is better)
Translates to: NCPNESNVHECV*THVQSHSHEFL
Trigger: TAGAAATTCATGCGAGTGTGACTGAACGTGTGTGCATACACACTCGTGCACATTGGACTCATTTGGGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CAA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGACAGTGGTGTACTCTTaGCCAAGAAGGCATCACCAA +
Preference number: 3 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLTVVYS*PRRHHQ
Trigger: TTGGTGATGCCTTCTTGGCAAAGAGTACACCACTGT...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CAA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAACCAGGCAGCTGGTTATaGGCACAGTGGGTATTAAGC +
Preference number: 3 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQPGSWL*AQWVLS
Trigger: GCTTAATACCCACTGTGCCAATAACCAGCTGCCTGG...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR GCA 72 bp ATTGGTGTTTCTACAGTCAAGTTAATTTGTGTTGGCTaGACGGGGCTTAGAGCATGCTGTTCCAAACATGCA +
Preference number: 3 (lower is better)
Translates to: IGVSTVKLICVG*TGLRACCSKHA
Trigger: TGCATGTTTGGAACAGCATGCTCTAAGCCCCGTGCAGCCAACACAAATTAACTTGACTGTAGAAACACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CCA 72 bp TGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTaGAAGCCAATATTCTATAACCTACAGGAATCCACT +
Preference number: 3 (lower is better)
Translates to: CHPTAYGPCKPV*KPIFYNLQEST
Trigger: AGTGGATTCCTGTAGGTTATAGAATATTGGCTTCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CCA 72 bp ACTTGTCCAAAGCCAGGCAGCTGGTTATTGGCACAGTaGGTATTAAGCCTTTGGATGACTAATTTTGTCTTC +
Preference number: 3 (lower is better)
Translates to: TCPKPGSWLLAQ*VLSLWMTNFVF
Trigger: GAAGACAAAATTAGTCATCCAAAGGCTTAATACCCACTGTGCCAATAACCAGCTGCCTGGCTTTGGACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CAA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACGTGATCCATGCAATCTaGGACATCATAACCCCATTA +
Preference number: 3 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHVIHAI*DIITPL
Trigger: TAATGGGGTTATGATGTCCAAGATTGCATGGATCAC...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 72 bp GATCCATGCAATCTTGGACATCATAACCCCATTACCTaGTGTGGCCACGGCCCCTATGAATTTATTAAGATT +
Preference number: 3 (lower is better)
Translates to: DPCNLGHHNPIT*CGHGPYEFIKI
Trigger: AATCTTAATAAATTCATAGGGGCCGTGGCCACATCAGGTAATGGGGTTATGATGTCCAAGATTGCATGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 72 bp GCATGCTGTTCCAAACATGCAAATGTCCTTTGTACCTaGTTTTCTTCATGTGCTAAAGAGCTGAGCAGATCC +
Preference number: 3 (lower is better)
Translates to: ACCSKHANVLCT*FSSCAKELSRS
Trigger: GGATCTGCTCAGCTCTTTAGCACATGAAGAAAATCAGGTACAAAGGACATTTGCATGTTTGGAACAGCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR GCA 72 bp GACCTGGTTATATGTCATCCAACAGCATATGGTCCCTaGAAGCCTGTTTGGAAGCCAATATTCTATAACCTA +
Preference number: 3 (lower is better)
Translates to: DLVICHPTAYGP*KPVWKPIFYNL
Trigger: TAGGTTATAGAATATTGGCTTCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CCA 72 bp AAAAGTGGACCTGGTTATATGTCATCCAACAGCATATaGTCCCTGCAAGCCTGTTTGGAAGCCAATATTCTA +
Preference number: 3 (lower is better)
Translates to: KSGPGYMSSNSI*SLQACLEANIL
Trigger: TAGAATATTGGCTTCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CAA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCCACTGGACAGGGTTCTaGAACTCAGAATATCTTACA +
Preference number: 3 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSHWTGF*NSEYLT
Trigger: TGTAAGATATTCTGAGTTCAAGAACCCTGTCCAGTG...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CAA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAATCATGGACCCATTTTTaGCTTGTCTCATGCAACGGG +
Preference number: 3 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQSWTHF*LVSCNG
Trigger: CCCGTTGCATGAGACAAGCAAAAAATGGGTCCATGA...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 72 bp CATCACCAATTAAGGTATTTGGCAGAGATCAGCCTCTaGAACTCATTATCACATAGACACCTTCTGTCTGGT +
Preference number: 3 (lower is better)
Translates to: HHQLRYLAEISL*NSLSHRHLLSG
Trigger: ACCAGACAGAAGGTGTCTATGTGATAATGAGTTTCAGAGGCTGATCTCTGCCAAATACCTTAATTGGTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 72 bp TATTTAACCTTTTACAATCTCCCTCTACATCTCAGCTaGGCTCACCAAAAGGCTCACTCAATCAGACAGGTA +
Preference number: 3 (lower is better)
Translates to: YLTFYNLPLHLS*AHQKAHSIRQV
Trigger: TACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CCA 72 bp AGTCTAAAGCAGCAAAACCAATCAGGAAACATTCTTTaGCCGCATATTTCTGCTCTTGCTCCACTGAAAATC +
Preference number: 3 (lower is better)
Translates to: SLKQQNQSGNIL*PHISALAPLKI
Trigger: GATTTTCAGTGGAGCAAGAGCAGAAATATGCGGCCAAAGAATGTTTCCTGATTGGTTTTGCTGCTTTAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CAA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTCACTGGACAGGGTTCTaGAACTCAGAATATCTTACA +
Preference number: 3 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFHWTGF*NSEYLT
Trigger: TGTAAGATATTCTGAGTTCAAGAACCCTGTCCAGTG...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CAA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGAGCCTCGTAACTACTTaGGAACATGACAAATGTAAT +
Preference number: 3 (lower is better)
Translates to: VFCISYSSRRASHFIKKLSLVTT*EHDKCN
Trigger: ATTACATTTGTCATGTTCCAAAGTAGTTACGAGGCT...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CAA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAACTCCCTTTATGTCAGTaGTTATCAAAACCGAGAGCA +
Preference number: 3 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQLPLCQ*LSKPRA
Trigger: TGCTCTCGGTTTTGATAACAACTGACATAAAGGGAG...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CAA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGAAGAGTGTAGCATTTTaGGAAGGAGAAATTCCCATT +
Preference number: 3 (lower is better)
Translates to: VFCISYSSRRASHFIKKLKSVAF*EGEIPI
Trigger: AATGGGAATTTCTCCTTCCAAAAATGCTACACTCTT...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 72 bp TGTAGACCCTCGAGTACTACCTGCATATTTTACAGATaGAAAAGATTAAATCCCAGAGAGAGGAAGGGAGTT +
Preference number: 3 (lower is better)
Translates to: CRPSSTTCIFYR*KRLNPRERKGV
Trigger: AACTCCCTTCCTCTCTCTGGGATTTAATCTTTTTCATCTGTAAAATATGCAGGTAGTACTCGAGGGTCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR GCA 72 bp ATCTTTGAAAAATCAGCTGAAAGTCATGAGGTCTTCTaGATTTCATATTCTAGCAGGAGGGCCTCTCATTTC +
Preference number: 3 (lower is better)
Translates to: IFEKSAESHEVF*ISYSSRRASHF
Trigger: GAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGACCTCATGACTTTCAGCTGATTTTTCAAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CCA 72 bp CCACTTTTAGCTTATTATCACTATTCAATGTCTAGGTaGAATGGATGCCTTCTCCTTTCCATGTGGAAACCT +
Preference number: 3 (lower is better)
Translates to: PLLAYYHYSMSR*NGCLLLSMWKP
Trigger: AGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAATAGTGATAATAAGCTAAAAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 72 bp AAAACAAGACAAGATGAGATCTTTAAATCATTTGCATaGGAAGAACTAACATCACGGGTGCTGGCTCCAAAG +
Preference number: 3 (lower is better)
Translates to: KTRQDEIFKSFA*EELTSRVLAPK
Trigger: CTTTGGAGCCAGCACCCGTGATGTTAGTTCTTCTCATGCAAATGATTTAAAGATCTCATCTTGTCTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
3UTR-3UTR CAA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAAAACTTAAGTCCTCTGTaGTTGCTTTGGGCATATAAA +
Preference number: 3 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQNLSPL*LLWAYK
Trigger: TTTATATGCCCAAAGCAACAACAGAGGACTTAAGTT...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR-3UTR CAA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAATCACATGTATCACGTTaGGTTCCTAGAGATTTTAGT +
Preference number: 3 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQSHVSR*VPRDFS
Trigger: ACTAAAATCTCTAGGAACCAAACGTGATACATGTGA...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR TCA 72 bp GACTGCATAATTATTCAACAGTTTTGGCATAAAATCTaGTGGCACAGTTCCCTTTGCTATTACCCTAACCTT +
Preference number: 3 (lower is better)
Translates to: DCIIIQQFWHKI*WHSSLCYYPNL
Trigger: AAGGTTAGGGTAATAGCAAAGGGAACTGTGCCATCAGATTTTATGCCAAAACTGTTGAATAATTATGCAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CCA 72 bp TTGCTTTGGGCATATAAACCCATGGTAATGAATCTGTaGACCTCCATGACAACTGGAAAATTTTTATATTCT +
Preference number: 3 (lower is better)
Translates to: LLWAYKPMVMNL*TSMTTGKFLYS
Trigger: AGAATATAAAAATTTTCCAGTTGTCATGGAGGTCCACAGATTCATTACCATGGGTTTATATGCCCAAAGCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTGTGCACCCCTCGCCATaGCCAGCCCGACAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSVHPSP*PARQRP
Trigger: CGGCCGCTGTCGGGCTGGCCATGGCGAGGGGTGCAC...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR GCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTCTCAGGTGGCCGCCGTaGACCCCTCGCCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSLRWPP*TPRHGQ
Trigger: CTGGCCATGGCGAGGGGTGCACGGCGGCCACCTGAG...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR GCA 90 bp CCAGGTCTCCAGGAATCCCAGCCAGTGGCTGAGACTTGCACTGAGGTTTCTTTCTCCTCCCTCCCTCCCTaGCTCAGCCTAGAAACTGCA +
Preference number: 4 (lower is better)
Translates to: PGLQESQPVAETCTEVSFSSLPP*LSLETA
Trigger: TGCAGTTTCTAGGCTGAGGCAGGGAGGGAGGGAGGA...GAAAGAAACCTCAGTGCAAGTCTCAGCCACTGGCTGGGATTCCTGGAGACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR GCA 90 bp CCAGGTCTCCAGGAATCCCAGCCAGTGGCTGAGACTTGCACTGAGGTTTCTTTCACGGGACTTCCAGTCTaGGTCACTGGTCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: PGLQESQPVAETCTEVSFTGLPV*VTGHSL
Trigger: CAAGCTGTGACCAGTGACGCAGACTGGAAGTCCCGT...GAAAGAAACCTCAGTGCAAGTCTCAGCCACTGGCTGGGATTCCTGGAGACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CCA 90 bp CCAGGTCTCCAGGAATCCCAGCCAGTGGCTGAGACTTGCACTGAGGTTTCTTTCAGGAATCCCAGCCAGTaGCTGAGACTTGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: PGLQESQPVAETCTEVSFRNPSQ*LRLALR
Trigger: CCTCAGTGCAAGTCTCAGCCACTGGCTGGGATTCCT...GAAAGAAACCTCAGTGCAAGTCTCAGCCACTGGCTGGGATTCCTGGAGACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CCA 90 bp GTCACCTCCTCAGATGGTGACAGAGTGAGGACTAAACATCTGGGTCTGCTCTCATCACTGCTGGCTCTGTaGCTTCCAGGTAAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: VTSSDGDRVRTKHLGLLSSLLAL*LPGKLA
Trigger: CGCCAGCTTACCTGGAAGCCACAGAGCCAGCAGTGA...TGAGAGCAGACCCAGATGTTTAGTCCTCACTCTGTCACCATCTGAGGAGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp CCAGGTCTCCAGGAATCCCAGCCAGTGGCTGAGACTTGCACTGAGGTTTCTTTCGGGACAAACCTGTCCTaGGTCCATAGAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: PGLQESQPVAETCTEVSFGTNLS*VHRVGT
Trigger: AGTACCAACTCTATGGACCCAGGACAGGTTTGTCCC...GAAAGAAACCTCAGTGCAAGTCTCAGCCACTGGCTGGGATTCCTGGAGACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CCA 90 bp GTCACCTCCTCAGATGGTGACAGAGTGAGGACTAAACATCTGGGTCTGCTCTCAGTTCACAGCAGGTCATaGGACAAACCTGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VTSSDGDRVRTKHLGLLSVHSRS*DKPVLG
Trigger: ACCCAGGACAGGTTTGTCCCATGACCTGCTGTGAAC...TGAGAGCAGACCCAGATGTTTAGTCCTCACTCTGTCACCATCTGAGGAGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR CCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACCTGTCTGCGGCCTCCTaGCCCTCTGGAGTATGCCTC +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHLSAAS*PSGVCL
Trigger: GAGGCATACTCCAGAGGGCCAGGAGGCCGCAGACAG...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGACAGGTGGCTTCCAGGTAAGCTaGCGGCAGTACCTTATCTGG +
Preference number: 4 (lower is better)
Translates to: SPSTSQLSSPKGSLNQTGGFQVS*RQYLIW
Trigger: CCAGATAAGGTACTGCCGCCAGCTTACCTGGAAGCC...ACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGACAGGTAGAAGGATACCTTGGTaGTGTTCAGGAGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: SPSTSQLSSPKGSLNQTGRRIPW*CSGGRC
Trigger: ACAGCGGCCTCCTGAACATCACCAAGGTATCCTTCT...ACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATTTGCTCGTGCAGCGATaGGGCGTCCGAGTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYLLVQR*GVRVSG
Trigger: GCCGCTGACTCGGACGCCTCATCGCTGCACGAGCAA...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp CCAGGTCTCCAGGAATCCCAGCCAGTGGCTGAGACTTGCACTGAGGTTTCTTTCTTCGCTACACGATCCTaGAATGTTAGTGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PGLQESQPVAETCTEVSFFATRS*NVSGFF
Trigger: GAAGAAGCCACTAACATTGCAGGATCGTGTAGCGAA...GAAAGAAACCTCAGTGCAAGTCTCAGCCACTGGCTGGGATTCCTGGAGACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CCA 90 bp GTCACCTCCTCAGATGGTGACAGAGTGAGGACTAAACATCTGGGTCTGCTCTCACGGCAGTACCTTATCTaGTACCTCAACAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: VTSSDGDRVRTKHLGLLSRQYLI*YLNRCW
Trigger: CCAACACCTGTTGAGGTACCAGATAAGGTACTGCCG...TGAGAGCAGACCCAGATGTTTAGTCCTCACTCTGTCACCATCTGAGGAGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGTCACTGCTGGCTCTGTaGCTTCCAGGTAAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQSLLAL*LPGKLA
Trigger: CGCCAGCTTACCTGGAAGCCACAGAGCCAGCAGTGA...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGGGTCAGTTCTGGCAATaGTTACGGGCACAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQGQFWQ*LRAQSP
Trigger: TGGGCTCTGTGCCCGTAATCATTGCCAGAACTGACC...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR TCA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACTTGCTCGTGCAGCGATaGGGCGTCCGAGTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNLLVQR*GVRVSG
Trigger: GCCGCTGACTCGGACGCCTCATCGCTGCACGAGCAA...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTGGACTGCGGGTGAACTaGCACCTTGATGGCAATTTG +
Preference number: 4 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSGLRVN*HLDGNL
Trigger: CAAATTGCCATCAAGGTGTCAGTTCACCCGCAGTCC...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTCCTCTACATCTCAGCTaGGCTCACCAAAAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSPLHLS*AHQKAH
Trigger: GTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGG...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGACAGGTTGGGTTTGGGTGGAATaGCAACTGAATAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: SPSTSQLSSPKGSLNQTGWVWVE*QLNRMG
Trigger: CCCCATCCTATTCAGTTGTCATTCCACCCAAACCCA...ACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp GTCACCTCCTCAGATGGTGACAGAGTGAGGACTAAACATCTGGGTCTGCTCTCACACAGTGACTGCCACTaGAGAGTTTTAGCACTGATC +
Preference number: 4 (lower is better)
Translates to: VTSSDGDRVRTKHLGLLSHSDCH*RVLALI
Trigger: GATCAGTGCTAAAACTCTTCAGTGGCAGTCACTGTG...TGAGAGCAGACCCAGATGTTTAGTCCTCACTCTGTCACCATCTGAGGAGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp ATGAGAAGAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTACGGGCCGTTCCCTGGTaGCTTTCTGAGTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: MRRTNITGAGSKAPVYILRAVPW*LSEWWG
Trigger: ACCCCACCACTCAGAAAGTCACCAGGGAACGGCCCG...TAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTCTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACGCAGAGGCACGCTCCTaGCAAGCTCTTCGATGTAGC +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHAEARS*QALRCS
Trigger: GCTACATCGAAGAGCTTGCCAGGAGCGTGCCTCTGC...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TCTGAAACTCATTATCACATAGACACCTTCTGTCTGGTATCAATTCTGCACCCTCTGTCTGCGGCCTCCTaGCCCTCTGGAGTATGCCTC +
Preference number: 4 (lower is better)
Translates to: SETHYHIDTFCLVSILHPLSAAS*PSGVCL
Trigger: GAGGCATACTCCAGAGGGCCAGGAGGCCGCAGACAG...AGGGTGCAGAATTGATACCAGACAGAAGGTGTCTATGTGATAATGAGTTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGGGCTTCCAGGTAAGCTaGCGGCAGTACCTTATCTGG +
Preference number: 4 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQGFQVS*RQYLIW
Trigger: CCAGATAAGGTACTGCCGCCAGCTTACCTGGAAGCC...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp GTCACCTCCTCAGATGGTGACAGAGTGAGGACTAAACATCTGGGTCTGCTCTCAGGGGGTTGGTTATCCTaGAAGACTGCAAACTTTCTG +
Preference number: 4 (lower is better)
Translates to: VTSSDGDRVRTKHLGLLSGGWLS*KTANFL
Trigger: CAGAAAGTTTGCAGTCTTCCAGGATAACCAACCCCC...TGAGAGCAGACCCAGATGTTTAGTCCTCACTCTGTCACCATCTGAGGAGGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CAA 72 bp GGGTCTGCTCTCATCACCAATGTGATCCATGCAATCTaGGACATCATAACCCCATTACCTGATGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: GSALITNVIHAI*DIITPLPDVAT
Trigger: CGTGGCCACATCAGGTAATGGGGTTATGATGTCCAAGATTGCATGGATCACATTGGTGATGAGAGCAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGGGACTGCGGGTGAACTaGCACCTTGATGGCAATTTG +
Preference number: 4 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQGLRVN*HLDGNL
Trigger: CAAATTGCCATCAAGGTGTCAGTTCACCCGCAGTCC...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGATTTTTGGACTGCGGGTaGACTGACACCTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGFLDCG*TDTLMA
Trigger: TGCCATCAAGGTGTCAGTTCACCCGCAGTCCAAAAA...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTCAGATGGTGACAGAGTaGGGACTAAACATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSQMVTE*GLNIWV
Trigger: GACCCAGATGTTTAGTCCTCACTCTGTCACCATCTG...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGACAGGTCACAGTGACTGCCACTaGAGAGTTTTAGCACTGATC +
Preference number: 4 (lower is better)
Translates to: SPSTSQLSSPKGSLNQTGHSDCH*RVLALI
Trigger: GATCAGTGCTAAAACTCTTCAGTGGCAGTCACTGTG...ACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGATCTTCTTTAGATGGCTaGTCATCATGCACAGGCGGG +
Preference number: 4 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGSSLDG*SSCTGG
Trigger: CCCGCCTGTGCATGATGAGCAGCCATCTAAAGAAGA...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGTGGCCCTCTGGAGTATaGCTCACAAAATTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQWPSGV*LTKFCP
Trigger: GGGGCAGAATTTTGTGAGGCATACTCCAGAGGGCCA...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp GTCACCTCCTCAGATGGTGACAGAGTGAGGACTAAACATCTGGGTCTGCTCTCAATAAGCTCTCCCCACTaGAGTCTAAAGCAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: VTSSDGDRVRTKHLGLLSISSPH*SLKQQN
Trigger: GTTTTGCTGCTTTAGACTGCAGTGGGGAGAGCTTAT...TGAGAGCAGACCCAGATGTTTAGTCCTCACTCTGTCACCATCTGAGGAGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGAGTGCACGAGTGTGTATaGACACACGTTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGVHECV*THVQSH
Trigger: GTGTGACTGAACGTGTGTGCATACACACTCGTGCAC...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGACAGGTTCCGCTTCAGAGAGTTaGGGATTGTGTAGACCTCAT +
Preference number: 4 (lower is better)
Translates to: SPSTSQLSSPKGSLNQTGSASES*GLCRPH
Trigger: ATGAGGTCTACACAATCCCCAACTCTCTGAAGCGGA...ACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTCGCACCCTTCTCTACTaGGGAAATTCCAGTCCCATT +
Preference number: 4 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSRTLLY*GNSSPI
Trigger: AATGGGACTGGAATTTCCCCAGTAGAGAAGGGTGCG...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGCAATGCAGGGGGCACTaGACAGGGTTCTTGAACTCA +
Preference number: 4 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQQCRGH*TGFLNS
Trigger: TGAGTTCAAGAACCCTGTCCAGTGCCCCCTGCATTG...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGAATCAATTCTGCACCCTaGTGTTTCTCGCACCCTTCT +
Preference number: 4 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGINSAP*CFSHPS
Trigger: AGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGAT...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGAGGGTGGAATGACAACTaGATAGGATGGGGTAACATC +
Preference number: 4 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGGWNDN*IGWGNI
Trigger: GATGTTACCCCATCCTATTCAGTTGTCATTCCACCC...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp CCAGGTCTCCAGGAATCCCAGCCAGTGGCTGAGACTTGCACTGAGGTTTCTTTCAATAGAGAGATGGTTTaGCAACCGAATCTTCTATCA +
Preference number: 4 (lower is better)
Translates to: PGLQESQPVAETCTEVSFNREMV*QPNLLS
Trigger: TGATAGAAGATTCGGTTGGCAAACCATCTCTCTATT...GAAAGAAACCTCAGTGCAAGTCTCAGCCACTGGCTGGGATTCCTGGAGACCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR GCA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGTCTTCTTTAGATGGCTaGTCATCATGCACAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQSSLDG*SSCTGG
Trigger: CCCGCCTGTGCATGATGAGCAGCCATCTAAAGAAGA...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGTGCCTCACAAAATTCTaGCCCTGCTCCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: VFCISYSSRRASHFIKKLCLTKF*PCSSSP
Trigger: TGGGCTGGAGGAGCAGGGGCAGAATTTTGTGAGGCA...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGACAGGTGTCTGGTATCAATTCTaGACCCTGATGTTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: SPSTSQLSSPKGSLNQTGVWYQF*TLMFLA
Trigger: TGCGAGAAACATCAGGGTGCAGAATTGATACCAGAC...ACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp GTCACCTCCTCAGATGGTGACAGAGTGAGGACTAAACATCTGGGTCTGCTCTCACCTCTGTTGTTGCTTTaGGCATATAAACCCATGGTA +
Preference number: 4 (lower is better)
Translates to: VTSSDGDRVRTKHLGLLSPLLLL*AYKPMV
Trigger: TACCATGGGTTTATATGCCCAAAGCAACAACAGAGG...TGAGAGCAGACCCAGATGTTTAGTCCTCACTCTGTCACCATCTGAGGAGGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp ATGAGAAGAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTATCCAGTCTGCGTCACTaGTCACAGCTTGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: MRRTNITGAGSKAPVYILSSLRH*SQLGLL
Trigger: CAGGAGCCCAAGCTGTGACCAGTGACGCAGACTGGA...TAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTCTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTGGGAGATCCAGGTCTTaGGTCTTTCTTCCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSGRSRS*VFLPFD
Trigger: ATCAAAGGGAAGAAAGACCCAAGACCTGGATCTCCC...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393704.3
CDS-3UTR TCA 90 bp GAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTATTATGACGGTCAGTTCTGGCAATaGTTACGGGCACAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ELTSRVLAPKLLFIFYYDGQFWQ*LRAQSP
Trigger: TGGGCTCTGTGCCCGTAATCATTGCCAGAACTGACC...GTCATAATAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR TCA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGCTCCTACCTAAGGGATaGGAGTCTCCTGGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: VFCISYSSRRASHFIKKLLLPKG*ESPGKA
Trigger: AGCCTTACCAGGAGACTCTCATCCCTTAGGTAGGAG...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp AAGAAGGCATCACCAATTAAGGTATTTGGCAGAGATCAGCCTCTGAAACTCATTCATAACCCCATTACCTaGTGTGGCCACGGCCCCTAT +
Preference number: 4 (lower is better)
Translates to: KKASPIKVFGRDQPLKLIHNPIT*CGHGPY
Trigger: ATAGGGGCCGTGGCCACATCAGGTAATGGGGTTATG...AATGAGTTTCAGAGGCTGATCTCTGCCAAATACCTTAATTGGTGATGCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGCCGCTGTCGTGCATTTaGCATTTTCCTCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VFCISYSSRRASHFIKKLPLSCI*HFPPPL
Trigger: GAGAGGAGGAGGAAAATGGCAAATGCACGACAGCGG...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR GCA 90 bp AGCTATGCAGTTCATAAAAGTGGACCTGGTTATATGTCATCCAACAGCATATGGTGCCTCACAAAATTCTaGCCCTGCTCCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SYAVHKSGPGYMSSNSIWCLTKF*PCSSSP
Trigger: TGGGCTGGAGGAGCAGGGGCAGAATTTTGTGAGGCA...CCATATGCTGTTGGATGACATATAACCAGGTCCACTTTTATGAACTGCATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTTGGCACAGTTCCCTTTaGTATTACCCTAACCTTTCG +
Preference number: 4 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSWHSSL*YYPNLS
Trigger: CGAAAGGTTAGGGTAATAGCAAAGGGAACTGTGCCA...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGATTTTTGCTTGTCTCATaGAACGGGGGTTGGTTATCC +
Preference number: 4 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGFLLVS*NGGWLS
Trigger: GGATAACCAACCCCCGTTGCATGAGACAAGCAAAAA...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTACGGGGCTTAGAGCATaGTGTTCCAAACATGCAAAT +
Preference number: 4 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSTGLRA*CSKHAN
Trigger: ATTTGCATGTTTGGAACAGCATGCTCTAAGCCCCGT...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TCAGAAATGCATTTATTAAAAACCAAGCAGTCTCCTGTTGTCCCACATCCTTCCGCCTTCCCGGGCGACTaGGCTGTAAGTCTTAAACGT +
Preference number: 4 (lower is better)
Translates to: SEMHLLKTKQSPVVPHPSAFPGD*AVSLKR
Trigger: ACGTTTAAGACTTACAGCGCAGTCGCCCGGGAAGGC...GGAAGGATGTGGGACAACAGGAGACTGCTTGGTTTTTAATAAATGCATTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTGCAGAGGCACGCTCCTaGCAAGCTCTTCGATGTAGC +
Preference number: 4 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFAEARS*QALRCS
Trigger: GCTACATCGAAGAGCTTGCCAGGAGCGTGCCTCTGC...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGGGCCTCCTGGCCCTCTaGAGTATGCCTCACAAAATT +
Preference number: 4 (lower is better)
Translates to: VFCISYSSRRASHFIKKLGLLAL*SMPHKI
Trigger: AATTTTGTGAGGCATACTCCAGAGGGCCAGGAGGCC...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp GTCACCTCCTCAGATGGTGACAGAGTGAGGACTAAACATCTGGGTCTGCTCTCATTTCTCCTTTTAAAGTaGCATCACTCCTACCTAAGG +
Preference number: 4 (lower is better)
Translates to: VTSSDGDRVRTKHLGLLSFLLLK*HHSYLR
Trigger: CCTTAGGTAGGAGTGATGCCACTTTAAAAGGAGAAA...TGAGAGCAGACCCAGATGTTTAGTCCTCACTCTGTCACCATCTGAGGAGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACTGGAATTATACCACTTaGACTGTGGGTCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHWNYTT*TVGQGC
Trigger: GCATCCCTGACCCACAGTTCAAGTGGTATAATTCCA...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR TCA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGTTTTTGGACTGCGGGTaGACTGACACCTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: VFCISYSSRRASHFIKKLFLDCG*TDTLMA
Trigger: TGCCATCAAGGTGTCAGTTCACCCGCAGTCCAAAAA...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp AAGAAGGCATCACCAATTAAGGTATTTGGCAGAGATCAGCCTCTGAAACTCATTCTCCTACCTAAGGGATaGGAGTCTCCTGGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: KKASPIKVFGRDQPLKLILLPKG*ESPGKA
Trigger: AGCCTTACCAGGAGACTCTCATCCCTTAGGTAGGAG...AATGAGTTTCAGAGGCTGATCTCTGCCAAATACCTTAATTGGTGATGCCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTGCAGAGATCAGCCTCTaGAACTCATTATCACATAGA +
Preference number: 4 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSAEISL*NSLSHR
Trigger: TCTATGTGATAATGAGTTTCAGAGGCTGATCTCTGC...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCTGAAACTCATTATCACATAGACACCTTCTGTCTGGTATCAATTCTGCACCCTCAGCCCTGGTACTGGTaGCTGATACCAAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SETHYHIDTFCLVSILHPQPWYW*LIPKSL
Trigger: CAGAGACTTTGGTATCAGTCACCAGTACCAGGGCTG...AGGGTGCAGAATTGATACCAGACAGAAGGTGTCTATGTGATAATGAGTTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp AAGAAGGCATCACCAATTAAGGTATTTGGCAGAGATCAGCCTCTGAAACTCATTCCTCTACATCTCAGCTaGGCTCACCAAAAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KKASPIKVFGRDQPLKLIPLHLS*AHQKAH
Trigger: GTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGG...AATGAGTTTCAGAGGCTGATCTCTGCCAAATACCTTAATTGGTGATGCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAACATAACCCCATTACCTaGTGTGGCCACGGCCCCTAT +
Preference number: 4 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQHNPIT*CGHGPY
Trigger: ATAGGGGCCGTGGCCACATCAGGTAATGGGGTTATG...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGTGGGTTTGGGTGGAATaGCAACTGAATAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: VFCISYSSRRASHFIKKLWVWVE*QLNRMG
Trigger: CCCCATCCTATTCAGTTGTCATTCCACCCAAACCCA...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGAAAACCGAGAGCATTATaGTGCCTTAAAGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGKPRAL*CLKEGE
Trigger: TTCTCCCTCTTTAAGGCATCATAATGCTCTCGGTTT...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGACAGGTTCCAAGCATGAGACTTaGAACATCTTATCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: SPSTSQLSSPKGSLNQTGSKHET*NILSVH
Trigger: ATGGACTGATAAGATGTTTCAAGTCTCATGCTTGGA...ACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACTGCCAAAAGGGTACGTaGAGAGCGGTAAAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHCQKGT*RAVKES
Trigger: ACTTTCCTTTACCGCTCTTCACGTACCCTTTTGGCA...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAAACAAAATTCTGCCCCTaGTCCTCCAGCCCAACCACC +
Preference number: 4 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQTKFCP*SSSPTT
Trigger: GGTGGTTGGGCTGGAGGAGCAGGGGCAGAATTTTGT...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp AAGAAGGCATCACCAATTAAGGTATTTGGCAGAGATCAGCCTCTGAAACTCATTTGGCCCTCTGGAGTATaGCTCACAAAATTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: KKASPIKVFGRDQPLKLIWPSGV*LTKFCP
Trigger: GGGGCAGAATTTTGTGAGGCATACTCCAGAGGGCCA...AATGAGTTTCAGAGGCTGATCTCTGCCAAATACCTTAATTGGTGATGCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp GAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTATTATGACCCTCAGCCTAGAAACTaGAGCCAGGTCTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: ELTSRVLAPKLLFIFYYDPQPRN*SQVSRN
Trigger: ATTCCTGGAGACCTGGCTGCAGTTTCTAGGCTGAGG...GTCATAATAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CCA 90 bp TCAGAAATGCATTTATTAAAAACCAAGCAGTCTCCTGTTGTCCCACATCCTTCCGTTCACAGCAGGTCATaGGACAAACCTGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SEMHLLKTKQSPVVPHPSVHSRS*DKPVLG
Trigger: ACCCAGGACAGGTTTGTCCCATGACCTGCTGTGAAC...GGAAGGATGTGGGACAACAGGAGACTGCTTGGTTTTTAATAAATGCATTTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATGGCCTCCTGGCCCTCTaGAGTATGCCTCACAAAATT +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYGLLAL*SMPHKI
Trigger: AATTTTGTGAGGCATACTCCAGAGGGCCAGGAGGCC...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp GTCACCTCCTCAGATGGTGACAGAGTGAGGACTAAACATCTGGGTCTGCTCTCACTTTCATGGGTGGTGTaGGTATATTTAACCTTTTAC +
Preference number: 4 (lower is better)
Translates to: VTSSDGDRVRTKHLGLLSLSWVV*VYLTFY
Trigger: GTAAAAGGTTAAATATACCCACACCACCCATGAAAG...TGAGAGCAGACCCAGATGTTTAGTCCTCACTCTGTCACCATCTGAGGAGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACTCATCCAACAGCATATaGTCCCTGCAAGCCTGTTTG +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHSSNSI*SLQACL
Trigger: CAAACAGGCTTGCAGGGACCATATGCTGTTGGATGA...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGTCATGCAACGGGGGTTaGTTATCCTGGAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: VFCISYSSRRASHFIKKLSCNGG*LSWKTA
Trigger: TGCAGTCTTCCAGGATAACCAACCCCCGTTGCATGA...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp GAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTATTATGACTCACTGGTCACAGCTTaGGCTCCTGTCTCCTTGCAA +
Preference number: 4 (lower is better)
Translates to: ELTSRVLAPKLLFIFYYDSLVTA*APVSLQ
Trigger: TTGCAAGGAGACAGGAGCCCAAGCTGTGACCAGTGA...GTCATAATAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
3UTR CAA 72 bp AAGGAAAAGCAATGCAGGGGGCACTGGACAGGGTTCTaGAACTCAGAATATCTTACAGTGGTGTACTCTTTG +
Preference number: 4 (lower is better)
Translates to: KEKQCRGHWTGF*NSEYLTVVYSL
Trigger: CAAAGAGTACACCACTGTAAGATATTCTGAGTTCAAGAACCCTGTCCAGTGCCCCCTGCATTGCTTTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACGTATTTACCTCGGTCTaGGAAGGATACCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHVFTSV*EGYLGD
Trigger: ATCACCAAGGTATCCTTCTCAGACCGAGGTAAATAC...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATTTGATGGCAATTTGCTaGGGTTGCTCGTGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYLMAIC*GCSCSD
Trigger: ATCGCTGCACGAGCAACCTCAGCAAATTGCCATCAA...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACTCTCCTCTACATCTTTaGCTTCAAACTGTCCACCCT +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHSPLHL*LQTVHP
Trigger: AGGGTGGACAGTTTGAAGTCAAAGATGTAGAGGAGA...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTCAGCCCTGGTACTGGTaGCTGATACCAAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFQPWYW*LIPKSL
Trigger: CAGAGACTTTGGTATCAGTCACCAGTACCAGGGCTG...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGACAGGTAGGTGGACCAAGAGATaGAAGCAAAAATCTTTAAAG +
Preference number: 4 (lower is better)
Translates to: SPSTSQLSSPKGSLNQTGRWTKR*KQKSLK
Trigger: CTTTAAAGATTTTTGCTTTCATCTCTTGGTCCACCT...ACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATCAGATGGTGACAGAGTaGGGACTAAACATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYQMVTE*GLNIWV
Trigger: GACCCAGATGTTTAGTCCTCACTCTGTCACCATCTG...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCGGGTGGAATGACAACTaGATAGGATGGGGTAACATC +
Preference number: 4 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSGWNDN*IGWGNI
Trigger: GATGTTACCCCATCCTATTCAGTTGTCATTCCACCC...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACTTAAAACTGCCCAAATaGGTCCAATGTGCACGAGTG +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHLKLPK*VQCARV
Trigger: CACTCGTGCACATTGGACTCATTTGGGCAGTTTTAA...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGACAGGTAATGCTTGGGATGGATaGGACATTCAGAGATTTTTA +
Preference number: 4 (lower is better)
Translates to: SPSTSQLSSPKGSLNQTGNAWDG*DIQRFL
Trigger: TAAAAATCTCTGAATGTCTCATCCATCCCAAGCATT...ACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGACAGGTAACCTGGTTGATCAATaGAGAAACCCTAAAAATGTC +
Preference number: 4 (lower is better)
Translates to: SPSTSQLSSPKGSLNQTGNLVDQ*RNPKNV
Trigger: GACATTTTTAGGGTTTCTTCATTGATCAACCAGGTT...ACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTAGGAGGCCGCTGTCGTaGATTTGCCATTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFRRPLS*ICHFPP
Trigger: AGGAGGAAAATGGCAAATGCACGACAGCGGCCTCCT...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR GCA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGCTTCTGCAGCTTCTCTaGACCTTCGGTCCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLLLQLL*TFGPKE
Trigger: TTCTTTAGGACCGAAGGTGCAGAGAAGCTGCAGAAG...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp AGCTATGCAGTTCATAAAAGTGGACCTGGTTATATGTCATCCAACAGCATATGGCTTGGCGATCTCAAATaGCTTCTGCAGCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SYAVHKSGPGYMSSNSIWLGDLK*LLQLLC
Trigger: GCAGAGAAGCTGCAGAAGGCATTTGAGATCGCCAAG...CCATATGCTGTTGGATGACATATAACCAGGTCCACTTTTATGAACTGCATAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTAAAAACCCACGTACGTaGATTTGCTATTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSKNPRT*ICYCSR
Trigger: TCTGCTACAATAGCAAATGCACGTACGTGGGTTTTT...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATACAGCATATGGTCCCTaGAAGCCTGTTTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYTAYGP*KPVWKP
Trigger: TGGCTTCCAAACAGGCTTGCAGGGACCATATGCTGT...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGACACCAATGTGATCCATaGAATCTTGGACATCATAAC +
Preference number: 4 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGHQCDP*NLGHHN
Trigger: GTTATGATGTCCAAGATTGCATGGATCACATTGGTG...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGAAGTCATGAGGTCTTCTaGATTTCATATTCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGSHEVF*ISYSSR
Trigger: CCTGCTAGAATATGAAATGCAGAAGACCTCATGACT...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTATGCTGTTCCAAACATaGAAATGTCCTTTGTACCTG +
Preference number: 4 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSMLFQT*KCPLYL
Trigger: CAGGTACAAAGGACATTTGCATGTTTGGAACAGCAT...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp GAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTATTATGACACGAGCAAACCACCTTaGTTCCGAAAGCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: ELTSRVLAPKLLFIFYYDTSKPP*FRKLLR
Trigger: CCTGAGAAGCTTTCGGAAGCAAGGTGGTTTGCTCGT...GTCATAATAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR GCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATAGGAGGCCGCTGTCGTaGATTTGCCATTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYRRPLS*ICHFPL
Trigger: CAAAGGAAAATGGCAAATGCACGACAGCGGCCTCCT...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393704.3
CDS-3UTR CCA 90 bp TCTGAAACTCATTATCACATAGACACCTTCTGTCTGGTATCAATTCTGCACCCTGGGACAAACCTGTCCTaGGTCCATAGAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: SETHYHIDTFCLVSILHPGTNLS*VHRVGT
Trigger: AGTACCAACTCTATGGACCCAGGACAGGTTTGTCCC...AGGGTGCAGAATTGATACCAGACAGAAGGTGTCTATGTGATAATGAGTTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR CCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATCGCACCCTTCTCTACTaGGGAAATTCCAGTCCCATT +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYRTLLY*GNSSPI
Trigger: AATGGGACTGGAATTTCCCCAGTAGAGAAGGGTGCG...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp AAGAAGGCATCACCAATTAAGGTATTTGGCAGAGATCAGCCTCTGAAACTCATTTCATGCAACGGGGGTTaGTTATCCTGGAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: KKASPIKVFGRDQPLKLISCNGG*LSWKTA
Trigger: TGCAGTCTTCCAGGATAACCAACCCCCGTTGCATGA...AATGAGTTTCAGAGGCTGATCTCTGCCAAATACCTTAATTGGTGATGCCTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGCTTCTCCTTTCCATGTaGAAACCTACACATGGGTTT +
Preference number: 4 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQLLLSM*KPTHGF
Trigger: AAACCCATGTGTAGGTTTCCACATGGAAAGGAGAAG...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTTATTCAATGTCTAGGTaGAATGGATGCCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSYSMSR*NGCLLL
Trigger: AAGGAGAAGGCATCCATTCCACCTAGACATTGAATA...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp GAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTATTATGACTGGAATTATACCACTTaGACTGTGGGTCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: ELTSRVLAPKLLFIFYYDWNYTT*TVGQGC
Trigger: GCATCCCTGACCCACAGTTCAAGTGGTATAATTCCA...GTCATAATAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR TCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTTTGATGGCAATTTGCTaGGGTTGCTCGTGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFLMAIC*GCSCSD
Trigger: ATCGCTGCACGAGCAACCTCAGCAAATTGCCATCAA...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCTGAAACTCATTATCACATAGACACCTTCTGTCTGGTATCAATTCTGCACCCTGGTGAACTGACACCTTaGTGGCAATTTGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SETHYHIDTFCLVSILHPGELTP*WQFAEV
Trigger: AACCTCAGCAAATTGCCATCAAGGTGTCAGTTCACC...AGGGTGCAGAATTGATACCAGACAGAAGGTGTCTATGTGATAATGAGTTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACTTTTGGCATAAAATCTaGTGGCACAGTTCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHFWHKI*WHSSLC
Trigger: GCAAAGGGAACTGTGCCATCAGATTTTATGCCAAAA...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATCAGAACCCCATTGTGTaGGATGTCAGGTCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYQNPIV*DVRSFN
Trigger: GTTGAAAGACCTGACATCTCACACAATGGGGTTCTG...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp AGCTATGCAGTTCATAAAAGTGGACCTGGTTATATGTCATCCAACAGCATATGGCAGAACCCCATTGTGTaGGATGTCAGGTCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: SYAVHKSGPGYMSSNSIWQNPIV*DVRSFN
Trigger: GTTGAAAGACCTGACATCTCACACAATGGGGTTCTG...CCATATGCTGTTGGATGACATATAACCAGGTCCACTTTTATGAACTGCATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATCATGTGCTAAAGAGCTaGGCAGATCCTAGATCACCA +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYHVLKS*ADPRSP
Trigger: TGGTGATCTAGGATCTGCTCAGCTCTTTAGCACATG...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp AGCTATGCAGTTCATAAAAGTGGACCTGGTTATATGTCATCCAACAGCATATGGCATGTGCTAAAGAGCTaGGCAGATCCTAGATCACCA +
Preference number: 4 (lower is better)
Translates to: SYAVHKSGPGYMSSNSIWHVLKS*ADPRSP
Trigger: TGGTGATCTAGGATCTGCTCAGCTCTTTAGCACATG...CCATATGCTGTTGGATGACATATAACCAGGTCCACTTTTATGAACTGCATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCCAGCTCTATGGTGTCTaGGATATACATTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSQLYGV*DIHLEA
Trigger: AGCCTCCAAATGTATATCTCAGACACCATAGAGCTG...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGAGACATCCAGAACTACTaGAATACAACAAACGAAATC +
Preference number: 4 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGDIQNY*NTTNEI
Trigger: GATTTCGTTTGTTGTATTTCAGTAGTTCTGGATGTC...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCAGAAATGCATTTATTAAAAACCAAGCAGTCTCCTGTTGTCCCACATCCTTCCCTTGAGCAAGAACCATaGCAAGCTCTCTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SEMHLLKTKQSPVVPHPSLEQEP*QALFPP
Trigger: TGGAGGAAAGAGAGCTTGTCATGGTTCTTGCTCAAG...GGAAGGATGTGGGACAACAGGAGACTGCTTGGTTTTTAATAAATGCATTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR GCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATCTTCTGCAGCTTCTCTaGACCTTCGGTCCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYLLQLL*TFGPKE
Trigger: TTCTTTAGGACCGAAGGTGCAGAGAAGCTGCAGAAG...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACCTTGGCGATCTCAAATaGCTTCTGCAGCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNLGDLK*LLQLLC
Trigger: GCAGAGAAGCTGCAGAAGGCATTTGAGATCGCCAAG...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TCTGAAACTCATTATCACATAGACACCTTCTGTCTGGTATCAATTCTGCACCCTATCGGTAGAAGGTTCTaGAGTTTCGGGGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: SETHYHIDTFCLVSILHPIGRRF*SFGGMF
Trigger: GAACATTCCCCCGAAACTGCAGAACCTTCTACCGAT...AGGGTGCAGAATTGATACCAGACAGAAGGTGTCTATGTGATAATGAGTTTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp AGCTATGCAGTTCATAAAAGTGGACCTGGTTATATGTCATCCAACAGCATATGGATCGGTAGAAGGTTCTaGAGTTTCGGGGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: SYAVHKSGPGYMSSNSIWIGRRF*SFGGMF
Trigger: GAACATTCCCCCGAAACTGCAGAACCTTCTACCGAT...CCATATGCTGTTGGATGACATATAACCAGGTCCACTTTTATGAACTGCATAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCAGGCTTAGCGGCAAGTaGGTACTACATCTGTATTAC +
Preference number: 4 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSRLSGK*VLHLYY
Trigger: GTAATACAGATGTAGTACGCACTTGCCGCTAAGCCT...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCCAGTGGTGTACTCTTTaGCAAGAAGGCATCACCAAT +
Preference number: 4 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSQWCTL*QEGITN
Trigger: ATTGGTGATGCCTTCTTGGCAAAGAGTACACCACTG...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACCCACGTACGTGCATTTaGTATTGTAGCAGACCTATA +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHPRTCI*YCSRPI
Trigger: TATAGGTCTGCTACAATAGCAAATGCACGTACGTGG...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACACAGCATATGGTCCCTaGAAGCCTGTTTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNTAYGP*KPVWKP
Trigger: TGGCTTCCAAACAGGCTTGCAGGGACCATATGCTGT...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTGTTATCCTGGAAGACTaGAAACTTTCTGTGAACTAT +
Preference number: 4 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSVILED*KLSVNY
Trigger: ATAGTTCACAGAAAGTTTGCAGTCTTCCAGGATAAC...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp AGCTATGCAGTTCATAAAAGTGGACCTGGTTATATGTCATCCAACAGCATATGGTCTAGGTGGAATGGATaGCTTCTCCTTTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: SYAVHKSGPGYMSSNSIWSRWNG*LLLSMW
Trigger: CCACATGGAAAGGAGAAGGCATCCATTCCACCTAGA...CCATATGCTGTTGGATGACATATAACCAGGTCCACTTTTATGAACTGCATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp AAGAAGGCATCACCAATTAAGGTATTTGGCAGAGATCAGCCTCTGAAACTCATTTCTAGGTGGAATGGATaGCTTCTCCTTTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: KKASPIKVFGRDQPLKLISRWNG*LLLSMW
Trigger: CCACATGGAAAGGAGAAGGCATCCATTCCACCTAGA...AATGAGTTTCAGAGGCTGATCTCTGCCAAATACCTTAATTGGTGATGCCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGGCATATTTCTGCTCTTaGTCCACTGAAAATCTGCCC +
Preference number: 4 (lower is better)
Translates to: VFCISYSSRRASHFIKKLAYFCS*STENLP
Trigger: GGGCAGATTTTCAGTGGAGCAAGAGCAGAAATATGC...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGAGTCATGAGGTCTTCTaGATTTCATATTCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQSHEVF*ISYSSR
Trigger: CCTGCTAGAATATGAAATGCAGAAGACCTCATGACT...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTGTGCACGAGTGTGTATaGACACACGTTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFVHECV*THVQSH
Trigger: GTGTGACTGAACGTGTGTGCATACACACTCGTGCAC...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp GAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTATTATGACGGGCTCCTGTCTCCTTaGAATCAAATGCAATCACGA +
Preference number: 4 (lower is better)
Translates to: ELTSRVLAPKLLFIFYYDGLLSP*NQMQSR
Trigger: TCGTGATTGCATTTGATTGCAAGGAGACAGGAGCCC...GTCATAATAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR GCA 90 bp GAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTATTATGACCCAGTGGCTGAGACTTaGACTGAGGTTTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: ELTSRVLAPKLLFIFYYDPVAET*TEVSFR
Trigger: TCTGAAAGAAACCTCAGTGCAAGTCTCAGCCACTGG...GTCATAATAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CCA 90 bp TCTGAAACTCATTATCACATAGACACCTTCTGTCTGGTATCAATTCTGCACCCTTCCGCTTCAGAGAGTTaGGGATTGTGTAGACCTCAT +
Preference number: 4 (lower is better)
Translates to: SETHYHIDTFCLVSILHPSASES*GLCRPH
Trigger: ATGAGGTCTACACAATCCCCAACTCTCTGAAGCGGA...AGGGTGCAGAATTGATACCAGACAGAAGGTGTCTATGTGATAATGAGTTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAACGGCAGTACCTTATCTaGTACCTCAACAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQRQYLI*YLNRCW
Trigger: CCAACACCTGTTGAGGTACCAGATAAGGTACTGCCG...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp AAGAAGGCATCACCAATTAAGGTATTTGGCAGAGATCAGCCTCTGAAACTCATTGGGGGTTGGTTATCCTaGAAGACTGCAAACTTTCTG +
Preference number: 4 (lower is better)
Translates to: KKASPIKVFGRDQPLKLIGGWLS*KTANFL
Trigger: CAGAAAGTTTGCAGTCTTCCAGGATAACCAACCCCC...AATGAGTTTCAGAGGCTGATCTCTGCCAAATACCTTAATTGGTGATGCCTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp AAGAAGGCATCACCAATTAAGGTATTTGGCAGAGATCAGCCTCTGAAACTCATTGTATTTACCTCGGTCTaGGAAGGATACCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: KKASPIKVFGRDQPLKLIVFTSV*EGYLGD
Trigger: ATCACCAAGGTATCCTTCTCAGACCGAGGTAAATAC...AATGAGTTTCAGAGGCTGATCTCTGCCAAATACCTTAATTGGTGATGCCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACGGTGAACTGACACCTTaGTGGCAATTTGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNGELTP*WQFAEV
Trigger: AACCTCAGCAAATTGCCATCAAGGTGTCAGTTCACC...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAAATCAATTCTGCACCCTaGTGTTTCTCGCACCCTTCT +
Preference number: 4 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQINSAP*CFSHPS
Trigger: AGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGAT...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCGCAGAGATCAGCCTCTaGAACTCATTATCACATAGA +
Preference number: 4 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSAEISL*NSLSHR
Trigger: TCTATGTGATAATGAGTTTCAGAGGCTGATCTCTGC...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGATGACAAATGTAATGTaGCTTGTAGATATCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQMTNVM*LVDISP
Trigger: AGGGCTGATATCTACAAGTCACATTACATTTGTCAT...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGTTTTGGCATAAAATCTaGTGGCACAGTTCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLFWHKI*WHSSLC
Trigger: GCAAAGGGAACTGTGCCATCAGATTTTATGCCAAAA...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCAAACCGAGAGCATTATaGTGCCTTAAAGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSKPRAL*CLKEGE
Trigger: TTCTCCCTCTTTAAGGCATCATAATGCTCTCGGTTT...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCTGAAACTCATTATCACATAGACACCTTCTGTCTGGTATCAATTCTGCACCCTTTAAAACTGCCCAAATaGGTCCAATGTGCACGAGTG +
Preference number: 4 (lower is better)
Translates to: SETHYHIDTFCLVSILHPLKLPK*VQCARV
Trigger: CACTCGTGCACATTGGACTCATTTGGGCAGTTTTAA...AGGGTGCAGAATTGATACCAGACAGAAGGTGTCTATGTGATAATGAGTTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAATGCCAAAAGGGTACGTaGAGAGCGGTAAAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQCQKGT*RAVKES
Trigger: ACTTTCCTTTACCGCTCTTCACGTACCCTTTTGGCA...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCTGAAACTCATTATCACATAGACACCTTCTGTCTGGTATCAATTCTGCACCCTCAGCTCTATGGTGTCTaGGATATACATTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SETHYHIDTFCLVSILHPQLYGV*DIHLEA
Trigger: AGCCTCCAAATGTATATCTCAGACACCATAGAGCTG...AGGGTGCAGAATTGATACCAGACAGAAGGTGTCTATGTGATAATGAGTTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACACAGAATCACCAGATTaGCATTTCTGTCGAGACATT +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHTESPD*HFCRDI
Trigger: AATGTCTCGACAGAAATGTCAATCTGGTGATTCTGT...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp TCAGAAATGCATTTATTAAAAACCAAGCAGTCTCCTGTTGTCCCACATCCTTCCCATAGAGTTGGTACTTaGGCAAGAACCATGACAAGC +
Preference number: 4 (lower is better)
Translates to: SEMHLLKTKQSPVVPHPSHRVGT*ARTMTS
Trigger: GCTTGTCATGGTTCTTGCTCAAGTACCAACTCTATG...GGAAGGATGTGGGACAACAGGAGACTGCTTGGTTTTTAATAAATGCATTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR GCA 90 bp TCTGAAACTCATTATCACATAGACACCTTCTGTCTGGTATCAATTCTGCACCCTCAGTGGTGTACTCTTTaGCAAGAAGGCATCACCAAT +
Preference number: 4 (lower is better)
Translates to: SETHYHIDTFCLVSILHPQWCTL*QEGITN
Trigger: ATTGGTGATGCCTTCTTGGCAAAGAGTACACCACTG...AGGGTGCAGAATTGATACCAGACAGAAGGTGTCTATGTGATAATGAGTTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGCCACGTACGTGCATTTaGTATTGTAGCAGACCTATA +
Preference number: 4 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLPRTCI*YCSRPI
Trigger: TATAGGTCTGCTACAATAGCAAATGCACGTACGTGG...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATTTTTTGCTTGTCTCATaGAACGGGGGTTGGTTATCC +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYFLLVS*NGGWLS
Trigger: GGATAACCAACCCCCGTTGCATGAGACAAGCAAAAA...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATGCATATTTCTGCTCTTaGTCCACTGAAAATCTGCCC +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYAYFCS*STENLP
Trigger: GGGCAGATTTTCAGTGGAGCAAGAGCAGAAATATGC...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATACGGGGCTTAGAGCATaGTGTTCCAAACATGCAAAT +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYTGLRA*CSKHAN
Trigger: ATTTGCATGTTTGGAACAGCATGCTCTAAGCCCCGT...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTTTAATTTGTGTTGGCTaGACGGGGCTTAGAGCATGC +
Preference number: 4 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFLICVG*TGLRAC
Trigger: GCATGCTCTAAGCCCCGTGCAGCCAACACAAATTAA...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAATTAATTTGTGTTGGCTaGACGGGGCTTAGAGCATGC +
Preference number: 4 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQLICVG*TGLRAC
Trigger: GCATGCTCTAAGCCCCGTGCAGCCAACACAAATTAA...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp ATGAGAAGAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTACTCCTTGCAATCAAATaGAATCACGAGCAAACCACC +
Preference number: 4 (lower is better)
Translates to: MRRTNITGAGSKAPVYILLLAIK*NHEQTT
Trigger: GGTGGTTTGCTCGTGATTGCATTTGATTGCAAGGAG...TAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTCTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATAAGCACACAGTCAGATaGCTCTTCAATCGATCCATC +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYKHTVR*LFNRSI
Trigger: GATGGATCGATTGAAGAGCCATCTGACTGTGTGCTT...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR CCA 90 bp GAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTATTATGACAAGCACACAGTCAGATaGCTCTTCAATCGATCCATC +
Preference number: 4 (lower is better)
Translates to: ELTSRVLAPKLLFIFYYDKHTVR*LFNRSI
Trigger: GATGGATCGATTGAAGAGCCATCTGACTGTGTGCTT...GTCATAATAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CCA 90 bp GAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTATTATGACATACCACTTGAACTGTaGGTCAGGGATGCCATAAAC +
Preference number: 4 (lower is better)
Translates to: ELTSRVLAPKLLFIFYYDIPLEL*VRDAIN
Trigger: GTTTATGGCATCCCTGACCCACAGTTCAAGTGGTAT...GTCATAATAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CCA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGCTTTCATGGGTGGTGTaGGTATATTTAACCTTTTAC +
Preference number: 4 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQLSWVV*VYLTFY
Trigger: GTAAAAGGTTAAATATACCCACACCACCCATGAAAG...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTTGGGTATTAAGCCTTTaGATGACTAATTTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSWVLSL*MTNFVF
Trigger: GAAGACAAAATTAGTCATCCAAAGGCTTAATACCCA...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCCCTCTGTTGTTGCTTTaGGCATATAAACCCATGGTA +
Preference number: 4 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSPLLLL*AYKPMV
Trigger: TACCATGGGTTTATATGCCCAAAGCAACAACAGAGG...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACTATTCAATGTCTAGGTaGAATGGATGCCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHYSMSR*NGCLLL
Trigger: AAGGAGAAGGCATCCATTCCACCTAGACATTGAATA...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAATCTCCTCTACATCTTTaGCTTCAAACTGTCCACCCT +
Preference number: 4 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQSPLHL*LQTVHP
Trigger: AGGGTGGACAGTTTGAAGTCAAAGATGTAGAGGAGA...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATACTGGACAGGGTTCTTaGACTCAGAATATCTTACAG +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYTGQGS*TQNILQ
Trigger: CTGTAAGATATTCTGAGTTCAAGAACCCTGTCCAGT...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp AAGAAGGCATCACCAATTAAGGTATTTGGCAGAGATCAGCCTCTGAAACTCATTGCTCATTTCTTTATGTaGCTGCCCAAAGCACTTCTA +
Preference number: 4 (lower is better)
Translates to: KKASPIKVFGRDQPLKLIAHFFM*LPKALL
Trigger: TAGAAGTGCTTTGGGCAGTCACATAAAGAAATGAGC...AATGAGTTTCAGAGGCTGATCTCTGCCAAATACCTTAATTGGTGATGCCTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGTCCAAGCATGAGACTTaGAACATCTTATCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLSKHET*NILSVH
Trigger: ATGGACTGATAAGATGTTTCAAGTCTCATGCTTGGA...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAAAGGCTTAGCGGCAAGTaGGTACTACATCTGTATTAC +
Preference number: 4 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQRLSGK*VLHLYY
Trigger: GTAATACAGATGTAGTACGCACTTGCCGCTAAGCCT...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGAAAAACCCACGTACGTaGATTTGCTATTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLKNPRT*ICYCSR
Trigger: TCTGCTACAATAGCAAATGCACGTACGTGGGTTTTT...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCCACCAATGTGATCCATaGAATCTTGGACATCATAAC +
Preference number: 4 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSHQCDP*NLGHHN
Trigger: GTTATGATGTCCAAGATTGCATGGATCACATTGGTG...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACGTTATCCTGGAAGACTaGAAACTTTCTGTGAACTAT +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHVILED*KLSVNY
Trigger: ATAGTTCACAGAAAGTTTGCAGTCTTCCAGGATAAC...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACGCTCCACTGAAAATCTaGCCACTTTTAGCTTATTAT +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHAPLKI*PLLAYY
Trigger: ATAATAAGCTAAAAGTGGGCAGATTTTCAGTGGAGC...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTATAAGCTCTCCCCACTaGAGTCTAAAGCAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFISSPH*SLKQQN
Trigger: GTTTTGCTGCTTTAGACTGCAGTGGGGAGAGCTTAT...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TCTGAAACTCATTATCACATAGACACCTTCTGTCTGGTATCAATTCTGCACCCTAAGGCAATAGAGAGATaGTTTGCCAACCGAATCTTC +
Preference number: 4 (lower is better)
Translates to: SETHYHIDTFCLVSILHPKAIER*FANRIF
Trigger: GAAGATTCGGTTGGCAAACCATCTCTCTATTGCCTT...AGGGTGCAGAATTGATACCAGACAGAAGGTGTCTATGTGATAATGAGTTTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR CCA 90 bp ATGAGAAGAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTAAAGGCAATAGAGAGATaGTTTGCCAACCGAATCTTC +
Preference number: 4 (lower is better)
Translates to: MRRTNITGAGSKAPVYILKAIER*FANRIF
Trigger: GAAGATTCGGTTGGCAAACCATCTCTCTATTGCCTT...TAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTCTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CCA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACATACCACTTGAACTGTaGGTCAGGGATGCCATAAAC +
Preference number: 4 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNIPLEL*VRDAIN
Trigger: GTTTATGGCATCCCTGACCCACAGTTCAAGTGGTAT...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR CCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACCAGAATATCTTACAGTaGTGTACTCTTTGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHQNILQ*CTLCQE
Trigger: TTCTTGGCAAAGAGTACACCACTGTAAGATATTCTG...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATCCCTGCAAGCCTGTTTaGAAGCCAATATTCTATAAC +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYPCKPV*KPIFYN
Trigger: GTTATAGAATATTGGCTTCCAAACAGGCTTGCAGGG...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGTCAGGAAACATTCTTTaGCCGCATATTTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLSGNIL*PHISAL
Trigger: AAGAGCAGAAATATGCGGCCAAAGAATGTTTCCTGA...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCTGTGTAACCCAAACCTaGTTGATCAATGAAGAAACC +
Preference number: 4 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSCVTQT*LINEET
Trigger: GGTTTCTTCATTGATCAACCAGGTTTGGGTTACACA...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTACTGGACAGGGTTCTTaGACTCAGAATATCTTACAG +
Preference number: 4 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFTGQGS*TQNILQ
Trigger: CTGTAAGATATTCTGAGTTCAAGAACCCTGTCCAGT...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAAGCTCATTTCTTTATGTaGCTGCCCAAAGCACTTCTA +
Preference number: 4 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQAHFFM*LPKALL
Trigger: TAGAAGTGCTTTGGGCAGTCACATAAAGAAATGAGC...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGAATGCTTGGGATGGATaGGACATTCAGAGATTTTTA +
Preference number: 4 (lower is better)
Translates to: VFCISYSSRRASHFIKKLNAWDG*DIQRFL
Trigger: TAAAAATCTCTGAATGTCTCATCCATCCCAAGCATT...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGACATCCAGAACTACTaGAATACAACAAACGAAATC +
Preference number: 4 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLDIQNY*NTTNEI
Trigger: GATTTCGTTTGTTGTATTTCAGTAGTTCTGGATGTC...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp ATGAGAAGAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTATCGATCCATCTTCTTTaGTTGCTCTGTAAGGCAATA +
Preference number: 4 (lower is better)
Translates to: MRRTNITGAGSKAPVYILSIHLL*LLCKAI
Trigger: TATTGCCTTACAGAGCAAGCAAAGAAGATGGATCGA...TAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTCTTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR GCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATCTTCTTTCAGCAGCTTaGCAATGGAATTATACCACT +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYLLSAA*QWNYTT
Trigger: AGTGGTATAATTCCATTGGCAAGCTGCTGAAAGAAG...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR GCA 90 bp TCAGAAATGCATTTATTAAAAACCAAGCAGTCTCCTGTTGTCCCACATCCTTCCCTTCTTTCAGCAGCTTaGCAATGGAATTATACCACT +
Preference number: 4 (lower is better)
Translates to: SEMHLLKTKQSPVVPHPSLLSAA*QWNYTT
Trigger: AGTGGTATAATTCCATTGGCAAGCTGCTGAAAGAAG...GGAAGGATGTGGGACAACAGGAGACTGCTTGGTTTTTAATAAATGCATTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR GCA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGCTCCACTGAAAATCTaGCCACTTTTAGCTTATTAT +
Preference number: 4 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLAPLKI*PLLAYY
Trigger: ATAATAAGCTAAAAGTGGGCAGATTTTCAGTGGAGC...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATATGCTGTTCCAAACATaGAAATGTCCTTTGTACCTG +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYMLFQT*KCPLYL
Trigger: CAGGTACAAAGGACATTTGCATGTTTGGAACAGCAT...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTCCCTGCAAGCCTGTTTaGAAGCCAATATTCTATAAC +
Preference number: 4 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFPCKPV*KPIFYN
Trigger: GTTATAGAATATTGGCTTCCAAACAGGCTTGCAGGG...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAATGGTTATTGGCACAGTaGGTATTAAGCCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQWLLAQ*VLSLWM
Trigger: CATCCAAAGGCTTAATACCCACTGTGCCAATAACCA...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACATGGTAATGAATCTGTaGACCTCCATGACAACTGGA +
Preference number: 4 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNMVMNL*TSMTTG
Trigger: TCCAGTTGTCATGGAGGTCCACAGATTCATTACCAT...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAACTTCTCCTTTCCATGTaGAAACCTACACATGGGTTT +
Preference number: 4 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQLLLSM*KPTHGF
Trigger: AAACCCATGTGTAGGTTTCCACATGGAAAGGAGAAG...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TCTGAAACTCATTATCACATAGACACCTTCTGTCTGGTATCAATTCTGCACCCTTCAGGAAACATTCTTTaGCCGCATATTTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SETHYHIDTFCLVSILHPSGNIL*PHISAL
Trigger: AAGAGCAGAAATATGCGGCCAAAGAATGTTTCCTGA...AGGGTGCAGAATTGATACCAGACAGAAGGTGTCTATGTGATAATGAGTTTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACTTGTTAGCAGCTCTATaGTGTCTGAGATATACATTT +
Preference number: 4 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHLLAAL*CLRYTF
Trigger: AAATGTATATCTCAGACACCATAGAGCTGCTAACAA...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp TCAGAAATGCATTTATTAAAAACCAAGCAGTCTCCTGTTGTCCCACATCCTTCCTTTCTTTCAGAAGTGTaGTCTTTAAATCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: SEMHLLKTKQSPVVPHPSFLSEV*SLNPRP
Trigger: TGGCCGTGGATTTAAAGACCACACTTCTGAAAGAAA...GGAAGGATGTGGGACAACAGGAGACTGCTTGGTTTTTAATAAATGCATTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR TCA 90 bp AGCTATGCAGTTCATAAAAGTGGACCTGGTTATATGTCATCCAACAGCATATGGATGACAAATGTAATGTaGCTTGTAGATATCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SYAVHKSGPGYMSSNSIWMTNVM*LVDISP
Trigger: AGGGCTGATATCTACAAGTCACATTACATTTGTCAT...CCATATGCTGTTGGATGACATATAACCAGGTCCACTTTTATGAACTGCATAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAAAAAGGAGCAAGGATGTaGATATTGGTTTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQKGARM*ILVWFC
Trigger: ACAGAACCAAACCAATATTCACATCCTTGCTCCTTT...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATAGGTGGACCAAGAGATaGAAGCAAAAATCTTTAAAG +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYRWTKR*KQKSLK
Trigger: CTTTAAAGATTTTTGCTTTCATCTCTTGGTCCACCT...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp AAGAAGGCATCACCAATTAAGGTATTTGGCAGAGATCAGCCTCTGAAACTCATTGTATCTGAACAATGCTaGGAAAACAGAGTATCTGAA +
Preference number: 4 (lower is better)
Translates to: KKASPIKVFGRDQPLKLIVSEQC*ENRVSE
Trigger: TTCAGATACTCTGTTTTCTCAGCATTGTTCAGATAC...AATGAGTTTCAGAGGCTGATCTCTGCCAAATACCTTAATTGGTGATGCCTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp AGCTATGCAGTTCATAAAAGTGGACCTGGTTATATGTCATCCAACAGCATATGGGTAAAGGAAAGTATCTaGACAATGCTGAGAAAACAG +
Preference number: 4 (lower is better)
Translates to: SYAVHKSGPGYMSSNSIWVKESI*TMLRKQ
Trigger: CTGTTTTCTCAGCATTGTTCAGATACTTTCCTTTAC...CCATATGCTGTTGGATGACATATAACCAGGTCCACTTTTATGAACTGCATAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATGTAAAGGAAAGTATCTaGACAATGCTGAGAAAACAG +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYVKESI*TMLRKQ
Trigger: CTGTTTTCTCAGCATTGTTCAGATACTTTCCTTTAC...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTACAGAATCACCAGATTaGCATTTCTGTCGAGACATT +
Preference number: 4 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFTESPD*HFCRDI
Trigger: AATGTCTCGACAGAAATGTCAATCTGGTGATTCTGT...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp AAGAAGGCATCACCAATTAAGGTATTTGGCAGAGATCAGCCTCTGAAACTCATTAATAGAGAGATGGTTTaGCAACCGAATCTTCTATCA +
Preference number: 4 (lower is better)
Translates to: KKASPIKVFGRDQPLKLINREMV*QPNLLS
Trigger: TGATAGAAGATTCGGTTGGCAAACCATCTCTCTATT...AATGAGTTTCAGAGGCTGATCTCTGCCAAATACCTTAATTGGTGATGCCTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR GCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTTCGATCCATCTTCTTTaGTTGCTCTGTAAGGCAATA +
Preference number: 4 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFSIHLL*LLCKAI
Trigger: TATTGCCTTACAGAGCAAGCAAAGAAGATGGATCGA...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR GCA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTCTTTCCATCACATTaGTTTCTTGTTATCTCACAT +
Preference number: 4 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLVFPSH*FLVISH
Trigger: ATGTGAGATAACAAGAAAGCAATGTGATGGAAAGAC...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGTTTGCCATTTTCCTTTaGTTTAGGGTCCATGTAAAA +
Preference number: 4 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLFAIFL*FRVHVK
Trigger: TTTTACATGGACCCTAAAGCAAAGGAAAATGGCAAA...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393704.3
CDS-3UTR CCA 90 bp TCAGAAATGCATTTATTAAAAACCAAGCAGTCTCCTGTTGTCCCACATCCTTCCTCCTTGACTATGATATaGTCAGTTCTGGCAATGATT +
Preference number: 4 (lower is better)
Translates to: SEMHLLKTKQSPVVPHPSSLTMI*SVLAMI
Trigger: AATCATTGCCAGAACTGACCATATCATAGTCAAGGA...GGAAGGATGTGGGACAACAGGAGACTGCTTGGTTTTTAATAAATGCATTTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTTTTCTCCTTTTAAAGTaGCATCACTCCTACCTAAGG +
Preference number: 4 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFFLLLK*HHSYLR
Trigger: CCTTAGGTAGGAGTGATGCCACTTTAAAAGGAGAAA...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGTGGGTATTAAGCCTTTaGATGACTAATTTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLWVLSL*MTNFVF
Trigger: GAAGACAAAATTAGTCATCCAAAGGCTTAATACCCA...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATCACATGTATCACGTTTaGTTCCTAGAGATTTTAGTC +
Preference number: 4 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYHMYHV*FLEILV
Trigger: GACTAAAATCTCTAGGAACCAAACGTGATACATGTG...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAATGTGTAACCCAAACCTaGTTGATCAATGAAGAAACC +
Preference number: 4 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQCVTQT*LINEET
Trigger: GGTTTCTTCATTGATCAACCAGGTTTGGGTTACACA...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGTTGTTAGCAGCTCTATaGTGTCTGAGATATACATTT +
Preference number: 4 (lower is better)
Translates to: VFCISYSSRRASHFIKKLLLAAL*CLRYTF
Trigger: AAATGTATATCTCAGACACCATAGAGCTGCTAACAA...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CAA 72 bp TTCTTGAACTCAGAATATCTTACAGTGGTGTACTCTTaGCCAAGAAGGCATCACCAATTAAGGTATTTGGCA +
Preference number: 4 (lower is better)
Translates to: FLNSEYLTVVYS*PRRHHQLRYLA
Trigger: TGCCAAATACCTTAATTGGTGATGCCTTCTTGGCAAAGAGTACACCACTGTAAGATATTCTGAGTTCAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CAA 72 bp TCCATAACATCACGCACCTCACATATAACCACTTTCTaGCAGGACTGCATAATTATTCAACAGTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SITSRTSHITTF*QDCIIIQQFWH
Trigger: ATGCCAAAACTGTTGAATAATTATGCAGTCCTGCAAGAAAGTGGTTATATGTGAGGTGCGTGATGTTATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTGTATCTGAACAATGCTaGGAAAACAGAGTATCTGAA +
Preference number: 4 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFVSEQC*ENRVSE
Trigger: TTCAGATACTCTGTTTTCTCAGCATTGTTCAGATAC...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR TCA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAAAACCTGGTTGATCAATaGAGAAACCCTAAAAATGTC +
Preference number: 4 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQNLVDQ*RNPKNV
Trigger: GACATTTTTAGGGTTTCTTCATTGATCAACCAGGTT...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR GCA 90 bp TCTGAAACTCATTATCACATAGACACCTTCTGTCTGGTATCAATTCTGCACCCTGTCTTTCCATCACATTaGTTTCTTGTTATCTCACAT +
Preference number: 4 (lower is better)
Translates to: SETHYHIDTFCLVSILHPVFPSH*FLVISH
Trigger: ATGTGAGATAACAAGAAAGCAATGTGATGGAAAGAC...AGGGTGCAGAATTGATACCAGACAGAAGGTGTCTATGTGATAATGAGTTTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CCA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACTCCTTGACTATGATATaGTCAGTTCTGGCAATGATT +
Preference number: 4 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNSLTMI*SVLAMI
Trigger: AATCATTGCCAGAACTGACCATATCATAGTCAAGGA...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR CCA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTCACATGTATCACGTTTaGTTCCTAGAGATTTTAGTC +
Preference number: 4 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFHMYHV*FLEILV
Trigger: GACTAAAATCTCTAGGAACCAAACGTGATACATGTG...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CAA 72 bp TTTCCCCCACAATTGATTTGTGTAACCCAAACCTGGTaGATCAATGAAGAAACCCTAAAAATGTCATTAGGA +
Preference number: 4 (lower is better)
Translates to: FPPQLICVTQTW*INEETLKMSLG
Trigger: TCCTAATGACATTTTTAGGGTTTCTTCATTGATCAACCAGGTTTGGGTTACACAAATCAATTGTGGGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
3UTR CAA 72 bp ATACAGTATCACAAAATGAACTTAAGTCCTCTGTTGTaGCTTTGGGCATATAAACCCATGGTAATGAATCTG +
Preference number: 4 (lower is better)
Translates to: IQYHKMNLSPLL*LWAYKPMVMNL
Trigger: CAGATTCATTACCATGGGTTTATATGCCCAAAGCAACAACAGAGGACTTAAGTTCATTTTGTGATACTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS GCA 90 bp CGGCCGCTGCGCCGCACTCTGCGCCGGACGCCCGGTAGCGCCTACTaGGGGCGAGCCGCCTCCGCCGGCGCCTCACAGCGTTGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: RPLRRTLRRTPGSAY*GRAASAGASQRCEL
Trigger: CAGCTCGCAACGCTGTGAGGCGCCGGCGGAGGCGGCTCGCCCGCAGTAGGCGCTACCGGGCGTCCGGCGCAGAGTGCGGCGCAGCGGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000506764.1
CDS GCA 90 bp ACCCCTCGCCATGGCCAGCCCGACAGCGGCCGCTGCGCCGCACTCTaGGCCGGACGCCCGGTAGCGCCTACTGCGGGCGAGCCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: TPRHGQPDSGRCAAL*AGRPVAPTAGEPPP
Trigger: CGGAGGCGGCTCGCCCGCAGTAGGCGCTACCGGGCGTCCGGCGCAGAGTGCGGCGCAGCGGCCGCTGTCGGGCTGGCCATGGCGAGGGGT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000506764.1
CDS GCA 90 bp TGGCCGCCGTGCACCCCTCGCCATGGCCAGCCCGACAGCGGCCGCTaGGCCGCACTCTGCGCCGGACGCCCGGTAGCGCCTACTGCGGGC +
Preference number: 5 (lower is better)
Translates to: WPPCTPRHGQPDSGR*AALCAGRPVAPTAG
Trigger: GCCCGCAGTAGGCGCTACCGGGCGTCCGGCGCAGAGTGCGGCGCAGCGGCCGCTGTCGGGCTGGCCATGGCGAGGGGTGCACGGCGGCCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000506764.1
CDS GCA 90 bp AGCGCCTACTGCGGGCGAGCCGCCTCCGCCGGCGCCTCACAGCGTTaGGAGCTGCGCCGCCGGCTGCCGGGAGCGCGGAGCTTCCCACCT +
Preference number: 5 (lower is better)
Translates to: SAYCGRAASAGASQR*ELRRRLPGARSFPP
Trigger: AGGTGGGAAGCTCCGCGCTCCCGGCAGCCGGCGGCGCAGCTCGCAACGCTGTGAGGCGCCGGCGGAGGCGGCTCGCCCGCAGTAGGCGCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506764.1
CDS GCA 90 bp ACTGCGGGCGAGCCGCCTCCGCCGGCGCCTCACAGCGTTGCGAGCTaGGCCGCCGGCTGCCGGGAGCGCGGAGCTTCCCACCTACAGGAG +
Preference number: 5 (lower is better)
Translates to: TAGEPPPPAPHSVAS*AAGCRERGASHLQE
Trigger: CTCCTGTAGGTGGGAAGCTCCGCGCTCCCGGCAGCCGGCGGCGCAGCTCGCAACGCTGTGAGGCGCCGGCGGAGGCGGCTCGCCCGCAGT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506764.1
CDS GCA 90 bp CACAGCTTGGGCTCTGACACCGCCGCGCCACTCAGGTGGCCGCCGTaGACCCCTCGCCATGGCCAGCCCGACAGCGGCCGCTGCGCCGCA +
Preference number: 5 (lower is better)
Translates to: HSLGSDTAAPLRWPP*TPRHGQPDSGRCAA
Trigger: TGCGGCGCAGCGGCCGCTGTCGGGCTGGCCATGGCGAGGGGTGCACGGCGGCCACCTGAGTGGCGCGGCGGTGTCAGAGCCCAAGCTGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504999.1
CDS GCA 90 bp CTTGAGCAAGAACCTGACACCGCCGCGCCACTCAGGTGGCCGCCGTaGACCCCTCGCCATGGCCAGCCCGACAGCGGCCGCTGCGCCGCA +
Preference number: 5 (lower is better)
Translates to: LEQEPDTAAPLRWPP*TPRHGQPDSGRCAA
Trigger: TGCGGCGCAGCGGCCGCTGTCGGGCTGGCCATGGCGAGGGGTGCACGGCGGCCACCTGAGTGGCGCGGCGGTGTCAGGTTCTTGCTCAAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS GCA 90 bp TTCTTTGCTTGCTCTGACACCGCCGCGCCACTCAGGTGGCCGCCGTaGACCCCTCGCCATGGCCAGCCCGACAGCGGCCGCTGCGCCGCA +
Preference number: 5 (lower is better)
Translates to: FFACSDTAAPLRWPP*TPRHGQPDSGRCAA
Trigger: TGCGGCGCAGCGGCCGCTGTCGGGCTGGCCATGGCGAGGGGTGCACGGCGGCCACCTGAGTGGCGCGGCGGTGTCAGAGCAAGCAAAGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506764.1
CDS GCA 90 bp ATTTGCCATTTTCCTGACACCGCCGCGCCACTCAGGTGGCCGCCGTaGACCCCTCGCCATGGCCAGCCCGACAGCGGCCGCTGCGCCGCA +
Preference number: 5 (lower is better)
Translates to: ICHFPDTAAPLRWPP*TPRHGQPDSGRCAA
Trigger: TGCGGCGCAGCGGCCGCTGTCGGGCTGGCCATGGCGAGGGGTGCACGGCGGCCACCTGAGTGGCGCGGCGGTGTCAGGAAAATGGCAAAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512698.1
CDS CCA 90 bp AGGCGTCCGAGTCAGCGGCAGGGGAGTCGCTCCGCTTCAGAGAGTTaGGGATTGTGTAGACCTCATCCCTGTCTGCGGCCTCCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: RRPSQRQGSRSASES*GLCRPHPCLRPPGP
Trigger: AGGGCCAGGAGGCCGCAGACAGGGATGAGGTCTACACAATCCCCAACTCTCTGAAGCGGAGCGACTCCCCTGCCGCTGACTCGGACGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGACGGCGCCTCACAGCGTaGCGAGCTGCGCCGCCGGCT +
Preference number: 5 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGRRLTA*RAAPPA
Trigger: AGCCGGCGGCGCAGCTCGCAACGCTGTGAGGCGCCG...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS GCA 90 bp GCGGCCTCCTGGCCCTCTGGAGTATGCCTCACAAAATTCTGCCCCTaGTCCTCCAGCCCAACCACCTCCATAATCTCCTCCATGATAGTC +
Preference number: 5 (lower is better)
Translates to: AASWPSGVCLTKFCP*SSSPTTSIISSMIV
Trigger: GACTATCATGGAGGAGATTATGGAGGTGGTTGGGCTGGAGGAGCAGGGGCAGAATTTTGTGAGGCATACTCCAGAGGGCCAGGAGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS CCA 90 bp TCTCCCAGTAAACGGGACTTCCAGTCTGCGTCACTGGTCACAGCTTaGGCTCTGCCGGCATTTGGAAGGACTGCATCAGAATCACTCTGG +
Preference number: 5 (lower is better)
Translates to: SPSKRDFQSASLVTA*ALPAFGRTASESLW
Trigger: CCAGAGTGATTCTGATGCAGTCCTTCCAAATGCCGGCAGAGCCCAAGCTGTGACCAGTGACGCAGACTGGAAGTCCCGTTTACTGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510306.1
CDS CCA 90 bp TTAACCTCTTCTCTCCCAGTAAACGGGACTTCCAGTCTGCGTCACTaGTCACAGCTTGGGCTCTGCCGGCATTTGGAAGGACTGCATCAG +
Preference number: 5 (lower is better)
Translates to: LTSSLPVNGTSSLRH*SQLGLCRHLEGLHQ
Trigger: CTGATGCAGTCCTTCCAAATGCCGGCAGAGCCCAAGCTGTGACCAGTGACGCAGACTGGAAGTCCCGTTTACTGGGAGAGAAGAGGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510306.1
CDS-3UTR CAA 90 bp CCAGGTCTCCAGGAATCCCAGCCAGTGGCTGAGACTTGCACTGAGGTTTCTTTCCACGAGCAAACCACCTaGCTTCCGAAAGCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: PGLQESQPVAETCTEVSFHEQTT*LPKASQ
Trigger: CTGAGAAGCTTTCGGAAGCAAGGTGGTTTGCTCGTG...GAAAGAAACCTCAGTGCAAGTCTCAGCCACTGGCTGGGATTCCTGGAGACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CAA 90 bp CCAGGTCTCCAGGAATCCCAGCCAGTGGCTGAGACTTGCACTGAGGTTTCTTTCGTCCCACATCCTTCCTaGTTATTGCATCCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: PGLQESQPVAETCTEVSFVPHPS*LLHPPS
Trigger: GGAGGGAGGATGCAATAACAAGGAAGGATGTGGGAC...GAAAGAAACCTCAGTGCAAGTCTCAGCCACTGGCTGGGATTCCTGGAGACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS TCA 90 bp GGTCCATGTAAAAGGGAGATCCAGGTCTTGGGTCTTTCTTCCCTTTaGTTCAGTCACCGTGGGTTCCCTAGCGATAGCTCAGCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: GPCKREIQVLGLSSL*FSHRGFPSDSSALQ
Trigger: CTGCAGGGCTGAGCTATCGCTAGGGAACCCACGGTGACTGAATCAAAGGGAAGAAAGACCCAAGACCTGGATCTCCCTTTTACATGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393704.3
CDS-3UTR CAA 90 bp GTCACCTCCTCAGATGGTGACAGAGTGAGGACTAAACATCTGGGTCTGCTCTCACTCATGCAACGGGGGTaGGTTATCCTGGAAGACTGC +
Preference number: 5 (lower is better)
Translates to: VTSSDGDRVRTKHLGLLSLMQRG*VILEDC
Trigger: GCAGTCTTCCAGGATAACCAACCCCCGTTGCATGAG...TGAGAGCAGACCCAGATGTTTAGTCCTCACTCTGTCACCATCTGAGGAGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp CCAGGTCTCCAGGAATCCCAGCCAGTGGCTGAGACTTGCACTGAGGTTTCTTTCCCTGGGTCCATAGAGTaGGTACTTGAGCAAGAACCA +
Preference number: 5 (lower is better)
Translates to: PGLQESQPVAETCTEVSFPGSIE*VLEQEP
Trigger: TGGTTCTTGCTCAAGTACCAACTCTATGGACCCAGG...GAAAGAAACCTCAGTGCAAGTCTCAGCCACTGGCTGGGATTCCTGGAGACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS CCA 90 bp CTGTGTTACTGTTACTTACGGGCTCCAGGTCACTCATGTACACCCTaGTTTCAATCTCATCTGCCTCCCACAGGCTGGGGAACATCACCA +
Preference number: 5 (lower is better)
Translates to: LCYCYLRAPGHSCTP*FQSHLPPTGWGTSP
Trigger: TGGTGATGTTCCCCAGCCTGTGGGAGGCAGATGAGATTGAAACCAGGGTGTACATGAGTGACCTGGAGCCCGTAAGTAACAGTAACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510306.1
CDS-3UTR CAA 90 bp GTCACCTCCTCAGATGGTGACAGAGTGAGGACTAAACATCTGGGTCTGCTCTCACCAGGCAGCTGGTTATaGGCACAGTGGGTATTAAGC +
Preference number: 5 (lower is better)
Translates to: VTSSDGDRVRTKHLGLLSPGSWL*AQWVLS
Trigger: GCTTAATACCCACTGTGCCAATAACCAGCTGCCTGG...TGAGAGCAGACCCAGATGTTTAGTCCTCACTCTGTCACCATCTGAGGAGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS TCA 90 bp AAGCCACACACGTGTATTTACCTCGGTCTGAGAAGGATACCTTGGTaGTGTTCAGGAGGCCGCTGTCGTGCATTTGCCATTTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: KPHTCIYLGLRRIPW*CSGGRCRAFAIFLL
Trigger: GAGGAGGAAAATGGCAAATGCACGACAGCGGCCTCCTGAACATCACCAAGGTATCCTTCTCAGACCGAGGTAAATACACGTGTGTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS GCA 90 bp CAAACCACCTTGCTTCCGAAAGCTTCTCAGGCCTTCCCGGGCGACTaGGCTGTAAGTCTTAAACGTCTCTTAAAGCAAAGTCCACAGATG +
Preference number: 5 (lower is better)
Translates to: QTTLLPKASQAFPGD*AVSLKRLLKQSPQM
Trigger: CATCTGTGGACTTTGCTTTAAGAGACGTTTAAGACTTACAGCGCAGTCGCCCGGGAAGGCCTGAGAAGCTTTCGGAAGCAAGGTGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS CCA 90 bp CAGGACCTTTGCTTTAGGGTCCATGTAAAAGGGAGATCCAGGTCTTaGGTCTTTCTTCCCTTTGATTCAGTCACCGTGGGTTCCCTAGCG +
Preference number: 5 (lower is better)
Translates to: QDLCFRVHVKGRSRS*VFLPFDSVTVGSLA
Trigger: CGCTAGGGAACCCACGGTGACTGAATCAAAGGGAAGAAAGACCCAAGACCTGGATCTCCCTTTTACATGGACCCTAAAGCAAAGGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502832.1
CDS-3UTR CAA 90 bp TCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGACAGGTTCTGAGAAGGATACCTaGGTGATGTTCAGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: SPSTSQLSSPKGSLNQTGSEKDT*VMFRRP
Trigger: CGGCCTCCTGAACATCACCAAGGTATCCTTCTCAGA...ACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTGCAAGCTCTAGAGTTTaGGCGGAGGTGATGATGGGG +
Preference number: 5 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSASSRV*AEVMMG
Trigger: CCCCATCATCACCTCCGCCAAAACTCTAGAGCTTGC...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS TCA 90 bp AAGCCACACACGTGTATTTACCTCGGTCTGAGAAGGATACCTTGGTaGTGTTCAGGAGGCCGCTGTCGTGCATTTGCCATTTTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: KPHTCIYLGLRRIPW*CSGGRCRAFAIFLC
Trigger: GCAAAGGAAAATGGCAAATGCACGACAGCGGCCTCCTGAACATCACCAAGGTATCCTTCTCAGACCGAGGTAAATACACGTGTGTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393704.3
CDS TCA 90 bp AAGCCACACACGTGTATTTACCTCGGTCTGAGAAGGATACCTTGGTaGTGTTCAGGAGGCCGCTGTCGTGCATTTGCCATTTTCCTGACA +
Preference number: 5 (lower is better)
Translates to: KPHTCIYLGLRRIPW*CSGGRCRAFAIFLT
Trigger: TGTCAGGAAAATGGCAAATGCACGACAGCGGCCTCCTGAACATCACCAAGGTATCCTTCTCAGACCGAGGTAAATACACGTGTGTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512698.1
CDS GCA 90 bp GAGAAGGATACCTTGGTGATGTTCAGGAGGCCGCTGTCGTGCATTTaGCATTTTCCTCCTCCTCTCTCCTTCTCATCCTCTTCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: EKDTLVMFRRPLSCI*HFPPPLSFSSSSSF
Trigger: GAAAGAAGAAGAGGATGAGAAGGAGAGAGGAGGAGGAAAATGGCAAATGCACGACAGCGGCCTCCTGAACATCACCAAGGTATCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR CAA 90 bp TCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGACAGGTCCTGGGTCCATAGAGTaGGTACTTGAGCAAGAACCT +
Preference number: 5 (lower is better)
Translates to: SPSTSQLSSPKGSLNQTGPGSIE*VLEQEP
Trigger: AGGTTCTTGCTCAAGTACCAACTCTATGGACCCAGG...ACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR CAA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTCCAGGCAGCTGGTTATaGGCACAGTGGGTATTAAGC +
Preference number: 5 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSPGSWL*AQWVLS
Trigger: GCTTAATACCCACTGTGCCAATAACCAGCTGCCTGG...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS TCA 90 bp AAGCCACACACGTGTATTTACCTCGGTCTGAGAAGGATACCTTGGTaGTGTTCAGGAGGCCGCTGTCGTGCATTTGCCATTTTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: KPHTCIYLGLRRIPW*CSGGRCRAFAIFLF
Trigger: GAAAAGGAAAATGGCAAATGCACGACAGCGGCCTCCTGAACATCACCAAGGTATCCTTCTCAGACCGAGGTAAATACACGTGTGTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502832.1
CDS GCA 90 bp GACATGGCTTTCGTAAATAATGCAGGTGTTTTTGTCATGTGTCACTaGTGGCTCTGTGGCTTCCAGGTAAGCTGGCGGCAGTACCTTATC +
Preference number: 5 (lower is better)
Translates to: DMAFVNNAGVFVMCH*WLCGFQVSWRQYLI
Trigger: GATAAGGTACTGCCGCCAGCTTACCTGGAAGCCACAGAGCCAGCAGTGACACATGACAAAAACACCTGCATTATTTACGAAAGCCATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS CCA 90 bp ATGGCTTTCGTAAATAATGCAGGTGTTTTTGTCATGTGTCACTGCTaGCTCTGTGGCTTCCAGGTAAGCTGGCGGCAGTACCTTATCTGG +
Preference number: 5 (lower is better)
Translates to: MAFVNNAGVFVMCHC*LCGFQVSWRQYLIW
Trigger: CCAGATAAGGTACTGCCGCCAGCTTACCTGGAAGCCACAGAGCCAGCAGTGACACATGACAAAAACACCTGCATTATTTACGAAAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS CCA 90 bp AAATGCTGCTTAGAAGAGGAGGGCTCTCAAGCTCAGGGGAGGCTCTaGCAGCATCATTGTGATCTCAGTAGGAATAACTGTGACTTTGCT +
Preference number: 5 (lower is better)
Translates to: KCCLEEEGSQAQGRL*QHHCDLSRNNCDFA
Trigger: AGCAAAGTCACAGTTATTCCTACTGAGATCACAATGATGCTGCCAGAGCCTCCCCTGAGCTTGAGAGCCCTCCTCTTCTAAGCAGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506110.1
ENST00000514683.1
CDS-3UTR CAA 90 bp TCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGACAGGTAAACTGTCCACCCTCTaGGTCATCTGCATGCTCTTT +
Preference number: 5 (lower is better)
Translates to: SPSTSQLSSPKGSLNQTGKLSTL*VICMLF
Trigger: AAAGAGCATGCAGATGACCAAGAGGGTGGACAGTTT...ACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp GTCACCTCCTCAGATGGTGACAGAGTGAGGACTAAACATCTGGGTCTGCTCTCAAATTCCAGAACCCCATaGTGTGAGATGTCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: VTSSDGDRVRTKHLGLLSNSRTP*CEMSGL
Trigger: AAGACCTGACATCTCACACAATGGGGTTCTGGAATT...TGAGAGCAGACCCAGATGTTTAGTCCTCACTCTGTCACCATCTGAGGAGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp GTCACCTCCTCAGATGGTGACAGAGTGAGGACTAAACATCTGGGTCTGCTCTCATCCCCCACAATTGATTaGTGTAACCCAAACCTGGTT +
Preference number: 5 (lower is better)
Translates to: VTSSDGDRVRTKHLGLLSSPTID*CNPNLV
Trigger: AACCAGGTTTGGGTTACACAAATCAATTGTGGGGGA...TGAGAGCAGACCCAGATGTTTAGTCCTCACTCTGTCACCATCTGAGGAGGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS CCA 90 bp ATTTTCCTTTGCTTTAGGGTCCATGTAAAAGGGAGATCCAGGTCTTaGGTCTTTCTTCCCTTTGATTCAGTCACCGTGGGTTCCCTAGCG +
Preference number: 5 (lower is better)
Translates to: IFLCFRVHVKGRSRS*VFLPFDSVTVGSLA
Trigger: CGCTAGGGAACCCACGGTGACTGAATCAAAGGGAAGAAAGACCCAAGACCTGGATCTCCCTTTTACATGGACCCTAAAGCAAAGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393704.3
CDS-3UTR CAA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCCACAGGCGGGTGATATaGAGGACCATGACGATGGTG +
Preference number: 5 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSHRRVI*RTMTMV
Trigger: CACCATCGTCATGGTCCTCAATATCACCCGCCTGTG...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGCACAGGCGGGTGATATaGAGGACCATGACGATGGTG +
Preference number: 5 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLHRRVI*RTMTMV
Trigger: CACCATCGTCATGGTCCTCAATATCACCCGCCTGTG...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGGCAAGCTCTAGAGTTTaGGCGGAGGTGATGATGGGG +
Preference number: 5 (lower is better)
Translates to: VFCISYSSRRASHFIKKLASSRV*AEVMMG
Trigger: CCCCATCATCACCTCCGCCAAAACTCTAGAGCTTGC...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGAGTACCTCAACAGGTGTaGGCTCTTCAGATGTTAGCT +
Preference number: 5 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGVPQQV*ALQMLA
Trigger: AGCTAACATCTGAAGAGCCAACACCTGTTGAGGTAC...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTGTACCTCAACAGGTGTaGGCTCTTCAGATGTTAGCT +
Preference number: 5 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSVPQQV*ALQMLA
Trigger: AGCTAACATCTGAAGAGCCAACACCTGTTGAGGTAC...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTACAGTGGTGTACTCTTaGCCAAGAAGGCATCACCAA +
Preference number: 5 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSTVVYS*PRRHHQ
Trigger: TTGGTGATGCCTTCTTGGCAAAGAGTACACCACTGT...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp CTTTCCTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGCTCATGCAACGGGGGTaGGTTATCCTGGAAGACTGC +
Preference number: 5 (lower is better)
Translates to: LSSLRTTKSAMQFIKVDLLMQRG*VILEDC
Trigger: GCAGTCTTCCAGGATAACCAACCCCCGTTGCATGAG...CAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAGGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGACAGGTTCCCCCACAATTGATTaGTGTAACCCAAACCTGGTT +
Preference number: 5 (lower is better)
Translates to: SPSTSQLSSPKGSLNQTGSPTID*CNPNLV
Trigger: AACCAGGTTTGGGTTACACAAATCAATTGTGGGGGA...ACCTGTCTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp GAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTATTATGACGTCACTGGTCACAGCTaGGGCTCCTGTCTCCTTGCA +
Preference number: 5 (lower is better)
Translates to: ELTSRVLAPKLLFIFYYDVTGHS*GSCLLA
Trigger: TGCAAGGAGACAGGAGCCCAAGCTGTGACCAGTGAC...GTCATAATAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS GCA 90 bp TTTCATTTGGTAAGATTTGAAGGACCCTGGAAGGCTAAGCAGGCTTaGTTTATATGGGTATCTCGCTTCTCTTCTTGGGACCTCCCCACT +
Preference number: 5 (lower is better)
Translates to: FHLVRFEGPWKAKQA*FIWVSRFSSWDLPT
Trigger: AGTGGGGAGGTCCCAAGAAGAGAAGCGAGATACCCATATAAAGCAAGCCTGCTTAGCCTTCCAGGGTCCTTCAAATCTTACCAAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514683.1
CDS-3UTR CAA 90 bp TCTGAAACTCATTATCACATAGACACCTTCTGTCTGGTATCAATTCTGCACCCTGAGAGAGGAAGGGAGTaGTCCAAGGTCACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SETHYHIDTFCLVSILHPERGRE*SKVTSS
Trigger: TGAGGAGGTGACCTTGGACAACTCCCTTCCTCTCTC...AGGGTGCAGAATTGATACCAGACAGAAGGTGTCTATGTGATAATGAGTTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTAACCTACACATGGGTTaGGGTGGAATGACAACTGAA +
Preference number: 5 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSNLHMG*GGMTTE
Trigger: TTCAGTTGTCATTCCACCCAAACCCATGTGTAGGTT...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTGCCGCTGTCGTGCATTaGCCATTTTCCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFAAVVH*PFSSSS
Trigger: AGAGGAGGAGGAAAATGGCAAATGCACGACAGCGGC...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR CAA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATTCTGAGAAGGATACCTaGGTGATGTTCAGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYSEKDT*VMFRRP
Trigger: CGGCCTCCTGAACATCACCAAGGTATCCTTCTCAGA...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAAGAGAGAGGAAGGGAGTaGTCCAAGGTCACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQERGRE*SKVTSS
Trigger: TGAGGAGGTGACCTTGGACAACTCCCTTCCTCTCTC...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTCTCCCTTTATGTCAGTaGTTATCAAAACCGAGAGCA +
Preference number: 5 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSLPLCQ*LSKPRA
Trigger: TGCTCTCGGTTTTGATAACAACTGACATAAAGGGAG...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGAGTAACCCAAACCTGGTaGATCAATGAAGAAACCCTA +
Preference number: 5 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGVTQTW*INEETL
Trigger: TAGGGTTTCTTCATTGATCAACCAGGTTTGGGTTAC...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGATCCATCTTCTTTGCTaGCTCTGTAAGGCAATAGAG +
Preference number: 5 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQIHLLC*LCKAIE
Trigger: CTCTATTGCCTTACAGAGCAAGCAAAGAAGATGGAT...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR CAA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATTCAGAGAGTTGGGGATaGTGTAGACCTCATCCCTGT +
Preference number: 5 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYSESWG*CRPHPC
Trigger: ACAGGGATGAGGTCTACACAATCCCCAACTCTCTGA...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp AGCTATGCAGTTCATAAAAGTGGACCTGGTTATATGTCATCCAACAGCATATGGTCAGAGAGTTGGGGATaGTGTAGACCTCATCCCTGT +
Preference number: 5 (lower is better)
Translates to: SYAVHKSGPGYMSSNSIWSESWG*CRPHPC
Trigger: ACAGGGATGAGGTCTACACAATCCCCAACTCTCTGA...CCATATGCTGTTGGATGACATATAACCAGGTCCACTTTTATGAACTGCATAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACCACCTTGATGGCAATTaGCTGAGGTTGCTCGTGCAG +
Preference number: 5 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNHLDGN*LRLLVQ
Trigger: CTGCACGAGCAACCTCAGCAAATTGCCATCAAGGTG...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAACACCTTGATGGCAATTaGCTGAGGTTGCTCGTGCAG +
Preference number: 5 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQHLDGN*LRLLVQ
Trigger: CTGCACGAGCAACCTCAGCAAATTGCCATCAAGGTG...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGACAGTGGTGTACTCTTaGCCAAGAAGGCATCACCAA +
Preference number: 5 (lower is better)
Translates to: VFCISYSSRRASHFIKKLTVVYS*PRRHHQ
Trigger: TTGGTGATGCCTTCTTGGCAAAGAGTACACCACTGT...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGGTGATCCATGCAATCTaGGACATCATAACCCCATTA +
Preference number: 5 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQVIHAI*DIITPL
Trigger: TAATGGGGTTATGATGTCCAAGATTGCATGGATCAC...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCTCATGGACCCATTTTTaGCTTGTCTCATGCAACGGG +
Preference number: 5 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSSWTHF*LVSCNG
Trigger: CCCGTTGCATGAGACAAGCAAAAAATGGGTCCATGA...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGATCAGGAAACATTCTTaGGCCGCATATTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQIRKHS*AAYFCS
Trigger: AGAGCAGAAATATGCGGCCAAAGAATGTTTCCTGAT...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp GAACTAACATCACGGGTGCTGGCTCCAAAGCTCCTGTTTATATTTTATTATGACTGGGCTCCTGTCTCCTaGCAATCAAATGCAATCACG +
Preference number: 5 (lower is better)
Translates to: ELTSRVLAPKLLFIFYYDWAPVS*QSNAIT
Trigger: CGTGATTGCATTTGATTGCAAGGAGACAGGAGCCCA...GTCATAATAAAATATAAACAGGAGCTTTGGAGCCAGCACCCGTGATGTTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CAA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGGCCGCTGTCGTGCATTaGCCATTTTCCTTTGCTTTA +
Preference number: 5 (lower is better)
Translates to: VFCISYSSRRASHFIKKLAAVVH*PFSFAL
Trigger: TAAAGCAAAGGAAAATGGCAAATGCACGACAGCGGC...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393704.3
CDS TCA 90 bp GTGAGGATGCCTTTTCCATCTAGTTCTTCTCATATTCACTCAGTCTaGGTGAGAGGCTCTTCAACATTTTTCACCTACAGGACCTTTGCT +
Preference number: 5 (lower is better)
Translates to: VRMPFPSSSSHIHSV*VRGSSTFFTYRTFA
Trigger: AGCAAAGGTCCTGTAGGTGAAAAATGTTGAAGAGCCTCTCACTCAGACTGAGTGAATATGAGAAGAACTAGATGGAAAAGGCATCCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502832.1
CDS TCA 90 bp CAGAAACGAGACATGAAATTGCTCCTTTCCAGGCTAATCACAAAGTaGATGGCAGTGTGCTCCTTGAGTGACTCACCGATGATTTTTGAA +
Preference number: 5 (lower is better)
Translates to: QKRDMKLLLSRLITK*MAVCSLSDSPMIFE
Trigger: TTCAAAAATCATCGGTGAGTCACTCAAGGAGCACACTGCCATTCACTTTGTGATTAGCCTGGAAAGGAGCAATTTCATGTCTCGTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502832.1
CDS CCA 90 bp CAATCGATCCATCTTCTTTGCTTGCTCTGTAAGGCAATAGAGAGATaGTTTGCCAACCGAATCTTCTATCAGACAACACACTGTTCACAG +
Preference number: 5 (lower is better)
Translates to: QSIHLLCLLCKAIER*FANRIFYQTTHCSQ
Trigger: CTGTGAACAGTGTGTTGTCTGATAGAAGATTCGGTTGGCAAACCATCTCTCTATTGCCTTACAGAGCAAGCAAAGAAGATGGATCGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361618.4
ENST00000393702.7
ENST00000504999.1
ENST00000507601.1
ENST00000510306.1
CDS CCA 90 bp ACTAGGATTAAAAAGGGCACAGAAGGTAGAAAGCACACAGTCAGATaGCTCTTCAATCGATCCATCTTCTTTGCTTGCTCTGTAAGGCAA +
Preference number: 5 (lower is better)
Translates to: TRIKKGTEGRKHTVR*LFNRSIFFACSVRQ
Trigger: TTGCCTTACAGAGCAAGCAAAGAAGATGGATCGATTGAAGAGCCATCTGACTGTGTGCTTTCTACCTTCTGTGCCCTTTTTAATCCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361618.4
ENST00000393702.7
ENST00000504999.1
ENST00000510306.1
CDS-3UTR CAA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATAAACTGTCCACCCTCTaGGTCATCTGCATGCTCTTT +
Preference number: 5 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYKLSTL*VICMLF
Trigger: AAAGAGCATGCAGATGACCAAGAGGGTGGACAGTTT...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGATAATGCAGGTGTTTTaGTCATGTGTCACTGCTGGC +
Preference number: 5 (lower is better)
Translates to: VFCISYSSRRASHFIKKLIMQVF*SCVTAG
Trigger: GCCAGCAGTGACACATGACAAAAACACCTGCATTAT...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCCATAGCTTTTCGGGGTaGGTATTAGACATGGCTTTC +
Preference number: 5 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSHSFSG*VLDMAF
Trigger: GAAAGCCATGTCTAATACCAACCCCGAAAAGCTATG...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGAAGCCTCGTAACTACTTaGGAACATGACAAATGTAAT +
Preference number: 5 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGSLVTT*EHDKCN
Trigger: ATTACATTTGTCATGTTCCAAAGTAGTTACGAGGCT...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TGGACCTGGTTATATGTCATCCAACAGCATATGGTCCCTGCAAGCCTGTTTGGAAAGAGTGTAGCATTTTaGGAAGGAGAAATTCCCATT +
Preference number: 5 (lower is better)
Translates to: WTWLYVIQQHMVPASLFGKSVAF*EGEIPI
Trigger: AATGGGAATTTCTCCTTCCAAAAATGCTACACTCTT...TCCAAACAGGCTTGCAGGGACCATATGCTGTTGGATGACATATAACCAGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTTCACATGTATCACGTTaGGTTCCTAGAGATTTTAGT +
Preference number: 5 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSSHVSR*VPRDFS
Trigger: ACTAAAATCTCTAGGAACCAAACGTGATACATGTGA...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCAATTCCAGAACCCCATaGTGTGAGATGTCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSNSRTP*CEMSGL
Trigger: AAGACCTGACATCTCACACAATGGGGTTCTGGAATT...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TCAATTCTGCACCCTGATGTTTCTCGCACCCTTCTCTACTGGGGAAATTCCAGTACATGCAAATGTCCTTaGTACCTGATTTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: SILHPDVSRTLLYWGNSSTCKCP*YLIFFM
Trigger: CATGAAGAAAATCAGGTACAAAGGACATTTGCATGT...ACTGGAATTTCCCCAGTAGAGAAGGGTGCGAGAAACATCAGGGTGCAGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp AGCTATGCAGTTCATAAAAGTGGACCTGGTTATATGTCATCCAACAGCATATGGTACAGTCAAGTTAATTaGTGTTGGCTGCACGGGGCT +
Preference number: 5 (lower is better)
Translates to: SYAVHKSGPGYMSSNSIWYSQVN*CWLHGA
Trigger: AGCCCCGTGCAGCCAACACAAATTAACTTGACTGTA...CCATATGCTGTTGGATGACATATAACCAGGTCCACTTTTATGAACTGCATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp AAGAAGGCATCACCAATTAAGGTATTTGGCAGAGATCAGCCTCTGAAACTCATTTACAGTCAAGTTAATTaGTGTTGGCTGCACGGGGCT +
Preference number: 5 (lower is better)
Translates to: KKASPIKVFGRDQPLKLIYSQVN*CWLHGA
Trigger: AGCCCCGTGCAGCCAACACAAATTAACTTGACTGTA...AATGAGTTTCAGAGGCTGATCTCTGCCAAATACCTTAATTGGTGATGCCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGATTTTTCCCCCACAATaGATTTGTGTAACCCAAACC +
Preference number: 5 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQIFPPQ*ICVTQT
Trigger: GGTTTGGGTTACACAAATCAATTGTGGGGGAAAAAT...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACCACAGAATCACCAGATaGACATTTCTGTCGAGACAT +
Preference number: 5 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHHRITR*TFLSRH
Trigger: ATGTCTCGACAGAAATGTCAATCTGGTGATTCTGTG...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACGGGTCTTTCTTCCCTTaGATTCAGTCACCGTGGGTT +
Preference number: 5 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNGSFFP*IQSPWV
Trigger: AACCCACGGTGACTGAATCAAAGGGAAGAAAGACCC...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393704.3
CDS CCA 90 bp ATTAGGATTAAAAAGGGCACAGAAGGTAGAAAGCACACAGTCAGATaGCTCTTCAATCGATCCATCTTCTTTGCTTGCTCTGTAAGGCAA +
Preference number: 5 (lower is better)
Translates to: IRIKKGTEGRKHTVR*LFNRSIFFACSVRQ
Trigger: TTGCCTTACAGAGCAAGCAAAGAAGATGGATCGATTGAAGAGCCATCTGACTGTGTGCTTTCTACCTTCTGTGCCCTTTTTAATCCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507601.1
CDS-3UTR CAA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTGTCTCCTCTACATCTTaGACTTCAAACTGTCCACCC +
Preference number: 5 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFVSSTS*TSNCPP
Trigger: GGGTGGACAGTTTGAAGTCAAAGATGTAGAGGAGAC...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp AGCTATGCAGTTCATAAAAGTGGACCTGGTTATATGTCATCCAACAGCATATGGATAATGCAGGTGTTTTaGTCATGTGTCACTGCTGGC +
Preference number: 5 (lower is better)
Translates to: SYAVHKSGPGYMSSNSIWIMQVF*SCVTAG
Trigger: GCCAGCAGTGACACATGACAAAAACACCTGCATTAT...CCATATGCTGTTGGATGACATATAACCAGGTCCACTTTTATGAACTGCATAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TCATGGGTGGTGTGGGTATATTTAACCTTTTACAATCTCCCTCTACATCTCAGCTTAAGTCCTCTGTTGTaGCTTTGGGCATATAAACCC +
Preference number: 5 (lower is better)
Translates to: SWVVWVYLTFYNLPLHLSLSPLL*LWAYKP
Trigger: GGGTTTATATGCCCAAAGCAACAACAGAGGACTTAA...GCTGAGATGTAGAGGGAGATTGTAAAAGGTTAAATATACCCACACCACCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp AGCTATGCAGTTCATAAAAGTGGACCTGGTTATATGTCATCCAACAGCATATGGAACCTACACATGGGTTaGGGTGGAATGACAACTGAA +
Preference number: 5 (lower is better)
Translates to: SYAVHKSGPGYMSSNSIWNLHMG*GGMTTE
Trigger: TTCAGTTGTCATTCCACCCAAACCCATGTGTAGGTT...CCATATGCTGTTGGATGACATATAACCAGGTCCACTTTTATGAACTGCATAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp GTCTTCTGCATTTCATATTCTAGCAGGAGGGCCTCTCATTTCATAAAGAAGCTGATCAGGAAACATTCTTaGGCCGCATATTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: VFCISYSSRRASHFIKKLIRKHS*AAYFCS
Trigger: AGAGCAGAAATATGCGGCCAAAGAATGTTTCCTGAT...CAGCTTCTTTATGAAATGAGAGGCCCTCCTGCTAGAATATGAAATGCAGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGAAGAGTGTAGCATTTTaGGAAGGAGAAATTCCCATT +
Preference number: 5 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQKSVAF*EGEIPI
Trigger: AATGGGAATTTCTCCTTCCAAAAATGCTACACTCTT...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TTACAATCTCCCTCTACATCTCAGCTGAGCTCACCAAAAGGCTCACTCAATCAGTCACATGTATCACGTTaGGTTCCTAGAGATTTTAGT +
Preference number: 5 (lower is better)
Translates to: LQSPSTSQLSSPKGSLNQSHVSR*VPRDFS
Trigger: ACTAAAATCTCTAGGAACCAAACGTGATACATGTGA...CTGATTGAGTGAGCCTTTTGGTGAGCTCAGCTGAGATGTAGAGGGAGATTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp TCAGAAATGCATTTATTAAAAACCAAGCAGTCTCCTGTTGTCCCACATCCTTCCATCCATCTTCTTTGCTaGCTCTGTAAGGCAATAGAG +
Preference number: 5 (lower is better)
Translates to: SEMHLLKTKQSPVVPHPSIHLLC*LCKAIE
Trigger: CTCTATTGCCTTACAGAGCAAGCAAAGAAGATGGAT...GGAAGGATGTGGGACAACAGGAGACTGCTTGGTTTTTAATAAATGCATTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CAA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAAATGGAATTATACCACTaGAACTGTGGGTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQMELYH*NCGSGM
Trigger: CATCCCTGACCCACAGTTCAAGTGGTATAATTCCAT...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR CAA 90 bp TCAGAAATGCATTTATTAAAAACCAAGCAGTCTCCTGTTGTCCCACATCCTTCCTCTTCTTTCAGCAGCTaGCCAATGGAATTATACCAC +
Preference number: 5 (lower is better)
Translates to: SEMHLLKTKQSPVVPHPSSSFSS*PMELYH
Trigger: GTGGTATAATTCCATTGGCAAGCTGCTGAAAGAAGA...GGAAGGATGTGGGACAACAGGAGACTGCTTGGTTTTTAATAAATGCATTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS-3UTR CAA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTCATAGCTTTTCGGGGTaGGTATTAGACATGGCTTTC +
Preference number: 5 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFHSFSG*VLDMAF
Trigger: GAAAGCCATGTCTAATACCAACCCCGAAAAGCTATG...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp AAGAAGGCATCACCAATTAAGGTATTTGGCAGAGATCAGCCTCTGAAACTCATTGTGATCCATGCAATCTaGGACATCATAACCCCATTA +
Preference number: 5 (lower is better)
Translates to: KKASPIKVFGRDQPLKLIVIHAI*DIITPL
Trigger: TAATGGGGTTATGATGTCCAAGATTGCATGGATCAC...AATGAGTTTCAGAGGCTGATCTCTGCCAAATACCTTAATTGGTGATGCCTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATTTAAGTCCTCTGTTGTaGCTTTGGGCATATAAACCC +
Preference number: 5 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYLSPLL*LWAYKP
Trigger: GGGTTTATATGCCCAAAGCAACAACAGAGGACTTAA...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp ATTCAATGTCTAGGTGGAATGGATGCCTTCTCCTTTCCATGTGGAAACCTACACAGTCTTTCCATCACATaGCTTTCTTGTTATCTCACA +
Preference number: 5 (lower is better)
Translates to: IQCLGGMDAFSFPCGNLHSLSIT*LSCYLT
Trigger: TGTGAGATAACAAGAAAGCAATGTGATGGAAAGACT...GTGTAGGTTTCCACATGGAAAGGAGAAGGCATCCATTCCACCTAGACATTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTGTGCAAGCATCTTCCTaGATTCTCATTGTTAGCAGC +
Preference number: 5 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFVQASS*ILIVSS
Trigger: GCTGCTAACAATGAGAATCAAGGAAGATGCTTGCAC...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACGTGCAAGCATCTTCCTaGATTCTCATTGTTAGCAGC +
Preference number: 5 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNVQASS*ILIVSS
Trigger: GCTGCTAACAATGAGAATCAAGGAAGATGCTTGCAC...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS TCA 90 bp CATTTGCCATTTTCCTATAGCATGAGCTGTAACCATCTAGTTAAATaGGATCATCACAGCTCTCTCTGCCAGCAATTTCCTGTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: HLPFSYSMSCNHLVK*DHHSSLCQQFPVSN
Trigger: ATTGGAAACAGGAAATTGCTGGCAGAGAGAGCTGTGATGATCTCATTTAACTAGATGGTTACAGCTCATGCTATAGGAAAATGGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507601.1
CDS-3UTR CAA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAATCTTCTTTCAGCAGCTaGCCAATGGAATTATACCAC +
Preference number: 5 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQSSFSS*PMELYH
Trigger: GTGGTATAATTCCATTGGCAAGCTGCTGAAAGAAGA...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS-3UTR CAA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACCACTGGACAGGGTTCTaGAACTCAGAATATCTTACA +
Preference number: 5 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNHWTGF*NSEYLT
Trigger: TGTAAGATATTCTGAGTTCAAGAACCCTGTCCAGTG...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACCTCCCTTTATGTCAGTaGTTATCAAAACCGAGAGCA +
Preference number: 5 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNLPLCQ*LSKPRA
Trigger: TGCTCTCGGTTTTGATAACAACTGACATAAAGGGAG...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACGTAACCCAAACCTGGTaGATCAATGAAGAAACCCTA +
Preference number: 5 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNVTQTW*INEETL
Trigger: TAGGGTTTCTTCATTGATCAACCAGGTTTGGGTTAC...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp CTCTTTAAGGACAACCAAGTCAGCTATGCAGTTCATAAAAGTGGACCTGGTTATATTTTTCCCCCACAATaGATTTGTGTAACCCAAACC +
Preference number: 5 (lower is better)
Translates to: LFKDNQVSYAVHKSGPGYIFPPQ*ICVTQT
Trigger: GGTTTGGGTTACACAAATCAATTGTGGGGGAAAAAT...ATAACCAGGTCCACTTTTATGAACTGCATAGCTGACTTGGTTGTCCTTAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp ACTTCTAACCAGAAGTCAACAGTTCAGTCCTTTTCAAGAGATGTCTCATCAAACAGCCTCGTAACTACTTaGGAACATGACAAATGTAAT +
Preference number: 5 (lower is better)
Translates to: TSNQKSTVQSFSRDVSSNSLVTT*EHDKCN
Trigger: ATTACATTTGTCATGTTCCAAAGTAGTTACGAGGCT...GTTTGATGAGACATCTCTTGAAAAGGACTGAACTGTTGACTTCTGGTTAGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp GAAATTGATTTTACAAACGACTACATACGACCCAAAGGACGAGGCTTTGGATTTAGTCTTTCCATCACATaGCTTTCTTGTTATCTCACA +
Preference number: 5 (lower is better)
Translates to: EIDFTNDYIRPKGRGFGFSLSIT*LSCYLT
Trigger: TGTGAGATAACAAGAAAGCAATGTGATGGAAAGACT...AAATCCAAAGCCTCGTCCTTTGGGTCGTATGTAGTCGTTTGTAAAATCAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS-3UTR CAA 90 bp GTTATCTCACATTTGCCCTTCAAAACAAAGTTTCGACAACATAGACTGGTGCAAACATGCAAATGTCCTTaGTACCTGATTTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: VISHLPFKTKFRQHRLVQTCKCP*YLIFFM
Trigger: CATGAAGAAAATCAGGTACAAAGGACATTTGCATGT...TTGCACCAGTCTATGTTGTCGAAACTTTGTTTTGAAGGGCAAATGTGAGATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS GCA 72 bp CGCCGCACTCTGCGCCGGACGCCCGGTAGCGCCTACTaGGGGCGAGCCGCCTCCGCCGGCGCCTCACAGCGT +
Preference number: 6 (lower is better)
Translates to: RRTLRRTPGSAY*GRAASAGASQR
Trigger: ACGCTGTGAGGCGCCGGCGGAGGCGGCTCGCCCGCAGTAGGCGCTACCGGGCGTCCGGCGCAGAGTGCGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000506764.1
CDS GCA 72 bp GAGCCGCCTCCGCCGGCGCCTCACAGCGTTGCGAGCTaGGCCGCCGGCTGCCGGGAGCGCGGAGCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: EPPPPAPHSVAS*AAGCRERGASH
Trigger: GTGGGAAGCTCCGCGCTCCCGGCAGCCGGCGGCGCAGCTCGCAACGCTGTGAGGCGCCGGCGGAGGCGGCTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506764.1
CDS GCA 72 bp CATGGCCAGCCCGACAGCGGCCGCTGCGCCGCACTCTaGGCCGGACGCCCGGTAGCGCCTACTGCGGGCGAG +
Preference number: 6 (lower is better)
Translates to: HGQPDSGRCAAL*AGRPVAPTAGE
Trigger: CTCGCCCGCAGTAGGCGCTACCGGGCGTCCGGCGCAGAGTGCGGCGCAGCGGCCGCTGTCGGGCTGGCCATG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000506764.1
CDS GCA 72 bp TGCACCCCTCGCCATGGCCAGCCCGACAGCGGCCGCTaGGCCGCACTCTGCGCCGGACGCCCGGTAGCGCCT +
Preference number: 6 (lower is better)
Translates to: CTPRHGQPDSGR*AALCAGRPVAP
Trigger: AGGCGCTACCGGGCGTCCGGCGCAGAGTGCGGCGCAGCGGCCGCTGTCGGGCTGGCCATGGCGAGGGGTGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361618.4
ENST00000504999.1
ENST00000506764.1
CDS CCA 72 bp CACAGCTTGGGCTCTGACACCGCCGCGCCACTCAGGTaGCCGCCGTGCACCCCTCGCCATGGCCAGCCCGAC +
Preference number: 6 (lower is better)
Translates to: HSLGSDTAAPLR*PPCTPRHGQPD
Trigger: GTCGGGCTGGCCATGGCGAGGGGTGCACGGCGGCCACCTGAGTGGCGCGGCGGTGTCAGAGCCCAAGCTGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504999.1
CDS CCA 72 bp CTTGAGCAAGAACCTGACACCGCCGCGCCACTCAGGTaGCCGCCGTGCACCCCTCGCCATGGCCAGCCCGAC +
Preference number: 6 (lower is better)
Translates to: LEQEPDTAAPLR*PPCTPRHGQPD
Trigger: GTCGGGCTGGCCATGGCGAGGGGTGCACGGCGGCCACCTGAGTGGCGCGGCGGTGTCAGGTTCTTGCTCAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000507601.1
CDS CCA 72 bp TTCTTTGCTTGCTCTGACACCGCCGCGCCACTCAGGTaGCCGCCGTGCACCCCTCGCCATGGCCAGCCCGAC +
Preference number: 6 (lower is better)
Translates to: FFACSDTAAPLR*PPCTPRHGQPD
Trigger: GTCGGGCTGGCCATGGCGAGGGGTGCACGGCGGCCACCTGAGTGGCGCGGCGGTGTCAGAGCAAGCAAAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506764.1
CDS CCA 72 bp ATTTGCCATTTTCCTGACACCGCCGCGCCACTCAGGTaGCCGCCGTGCACCCCTCGCCATGGCCAGCCCGAC +
Preference number: 6 (lower is better)
Translates to: ICHFPDTAAPLR*PPCTPRHGQPD
Trigger: GTCGGGCTGGCCATGGCGAGGGGTGCACGGCGGCCACCTGAGTGGCGCGGCGGTGTCAGGAAAATGGCAAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512698.1
CDS TCA 72 bp GCATGGAGCCAGCTACCCAAAGCCTGGGTCCCACCGTaGGAGGCCTCACAGTGGGGAGCCCAAAGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: AWSQLPKAWVPP*EASQWGAQRPR
Trigger: CCTGGGCCTTTGGGCTCCCCACTGTGAGGCCTCTCACGGTGGGACCCAGGCTTTGGGTAGCTGGCTCCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514683.1
CDS CCA 72 bp AGTCAGCGGCAGGGGAGTCGCTCCGCTTCAGAGAGTTaGGGATTGTGTAGACCTCATCCCTGTCTGCGGCCT +
Preference number: 6 (lower is better)
Translates to: SQRQGSRSASES*GLCRPHPCLRP
Trigger: AGGCCGCAGACAGGGATGAGGTCTACACAATCCCCAACTCTCTGAAGCGGAGCGACTCCCCTGCCGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS CAA 90 bp TATCTCGCTTCTCTTCTTGGGACCTCCCCACTGCTAAGTGAGGCTTaGCTAGAGCATGGAGCCAGCTACCCAAAGCCTGGGTCCCACCGT +
Preference number: 6 (lower is better)
Translates to: YLASLLGTSPLLSEA*LEHGASYPKPGSHR
Trigger: ACGGTGGGACCCAGGCTTTGGGTAGCTGGCTCCATGCTCTAGCAAAGCCTCACTTAGCAGTGGGGAGGTCCCAAGAAGAGAAGCGAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514683.1
CDS GCA 72 bp TGGCCCTCTGGAGTATGCCTCACAAAATTCTGCCCCTaGTCCTCCAGCCCAACCACCTCCATAATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: WPSGVCLTKFCP*SSSPTTSIISS
Trigger: GGAGGAGATTATGGAGGTGGTTGGGCTGGAGGAGCAGGGGCAGAATTTTGTGAGGCATACTCCAGAGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS GCA 72 bp AAGGATACCTTGGTGATGTTCAGGAGGCCGCTGTCGTaGATTTGCCATTTTCCTGACACCGCCGCGCCACTC +
Preference number: 6 (lower is better)
Translates to: KDTLVMFRRPLS*ICHFPDTAAPL
Trigger: GAGTGGCGCGGCGGTGTCAGGAAAATGGCAAATGCACGACAGCGGCCTCCTGAACATCACCAAGGTATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512698.1
CDS CCA 72 bp TCTCTCCCAGTAAACGGGACTTCCAGTCTGCGTCACTaGTCACAGCTTGGGCTCTGCCGGCATTTGGAAGGA +
Preference number: 6 (lower is better)
Translates to: SLPVNGTSSLRH*SQLGLCRHLEG
Trigger: TCCTTCCAAATGCCGGCAGAGCCCAAGCTGTGACCAGTGACGCAGACTGGAAGTCCCGTTTACTGGGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510306.1
CDS CAA 72 bp CAGGTCATGGGACAAACCTGTCCTGGGTCCATAGAGTaGGTACTTGAGCAAGAACCTGACACCGCCGCGCCA +
Preference number: 6 (lower is better)
Translates to: QVMGQTCPGSIE*VLEQEPDTAAP
Trigger: TGGCGCGGCGGTGTCAGGTTCTTGCTCAAGTACCAACTCTATGGACCCAGGACAGGTTTGTCCCATGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000507601.1
CDS CAA 72 bp TCTCTTCTTGGGACCTCCCCACTGCTAAGTGAGGCTTaGCTAGAGCATGGAGCCAGCTACCCAAAGCCTGGG +
Preference number: 6 (lower is better)
Translates to: SLLGTSPLLSEA*LEHGASYPKPG
Trigger: CCCAGGCTTTGGGTAGCTGGCTCCATGCTCTAGCAAAGCCTCACTTAGCAGTGGGGAGGTCCCAAGAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514683.1
CDS CAA 90 bp GGCTCCTGTCTCCTTGCAATCAAATGCAATCACGAGCAAACCACCTaGCTTCCGAAAGCTTCTCAGGCCTTCCCGGGCGACTGCGCTGTA +
Preference number: 6 (lower is better)
Translates to: GSCLLAIKCNHEQTT*LPKASQAFPGDCAV
Trigger: TACAGCGCAGTCGCCCGGGAAGGCCTGAGAAGCTTTCGGAAGCAAGGTGGTTTGCTCGTGATTGCATTTGATTGCAAGGAGACAGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS CCA 72 bp TCTCTCCCAGTAAACGGGACTTCCAGTCTGCGTCACTaGTCACAGCTTGGGCTCCTGTCTCCTTGCAATCAA +
Preference number: 6 (lower is better)
Translates to: SLPVNGTSSLRH*SQLGLLSPCNQ
Trigger: TTGATTGCAAGGAGACAGGAGCCCAAGCTGTGACCAGTGACGCAGACTGGAAGTCCCGTTTACTGGGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS CAA 90 bp ACTTCCAGTCTGCGTCACTGGTCACAGCTTGGGCTCTGCCGGCATTaGGAAGGACTGCATCAGAATCACTCTGGCATTCTCCTAACTACC +
Preference number: 6 (lower is better)
Translates to: TSSLRHWSQLGLCRH*EGLHQNHSGILLTT
Trigger: GGTAGTTAGGAGAATGCCAGAGTGATTCTGATGCAGTCCTTCCAAATGCCGGCAGAGCCCAAGCTGTGACCAGTGACGCAGACTGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510306.1
CDS GCA 72 bp TCCTTGCAATCAAATGCAATCACGAGCAAACCACCTTaGTTCCGAAAGCTTCTCAGGCCTTCCCGGGCGACT +
Preference number: 6 (lower is better)
Translates to: SLQSNAITSKPP*FRKLLRPSRAT
Trigger: AGTCGCCCGGGAAGGCCTGAGAAGCTTTCGGAAGCAAGGTGGTTTGCTCGTGATTGCATTTGATTGCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS CCA 72 bp TGCAGGTGTTTTTGTCATGTGTCACTGCTGGCTCTGTaGCTTCCAGGTAAGCTGGCGGCAGTACCTTATCTG +
Preference number: 6 (lower is better)
Translates to: CRCFCHVSLLAL*LPGKLAAVPYL
Trigger: CAGATAAGGTACTGCCGCCAGCTTACCTGGAAGCCACAGAGCCAGCAGTGACACATGACAAAAACACCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS CCA 72 bp GAAGGACCCTGGAAGGCTAAGCAGGCTTGCTTTATATaGGTATCTCGCTTCTCTTCTTGGGACCTCCCCACT +
Preference number: 6 (lower is better)
Translates to: EGPWKAKQACFI*VSRFSSWDLPT
Trigger: AGTGGGGAGGTCCCAAGAAGAGAAGCGAGATACCCATATAAAGCAAGCCTGCTTAGCCTTCCAGGGTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514683.1
CDS GCA 72 bp GGTCACAGCTTGGGCTCCTGTCTCCTTGCAATCAAATaGAATCACGAGCAAACCACCTTGCTTCCGAAAGCT +
Preference number: 6 (lower is better)
Translates to: GHSLGSCLLAIK*NHEQTTLLPKA
Trigger: AGCTTTCGGAAGCAAGGTGGTTTGCTCGTGATTGCATTTGATTGCAAGGAGACAGGAGCCCAAGCTGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS GCA 72 bp CAGGTCACTCATGTACACCCTGGTTTCAATCTCATCTaGCTCCCACAGGCTGGGGAACATCACCAGACATTA +
Preference number: 6 (lower is better)
Translates to: QVTHVHPGFNLI*LPQAGEHHQTL
Trigger: TAATGTCTGGTGATGTTCCCCAGCCTGTGGGAGGCAGATGAGATTGAAACCAGGGTGTACATGAGTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510306.1
CDS CAA 72 bp ACACACGTGTATTTACCTCGGTCTGAGAAGGATACCTaGGTGATGTTCAGGAGGCCGCTGTCGTGCATTTGC +
Preference number: 6 (lower is better)
Translates to: THVYLPRSEKDT*VMFRRPLSCIC
Trigger: GCAAATGCACGACAGCGGCCTCCTGAACATCACCAAGGTATCCTTCTCAGACCGAGGTAAATACACGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361618.4
ENST00000393704.3
ENST00000502832.1
ENST00000507601.1
ENST00000512698.1
CDS TCA 72 bp ACGTGTATTTACCTCGGTCTGAGAAGGATACCTTGGTaGTGTTCAGGAGGCCGCTGTCGTGCATTTGCCATT +
Preference number: 6 (lower is better)
Translates to: TCIYLGLRRIPW*CSGGRCRAFAI
Trigger: AATGGCAAATGCACGACAGCGGCCTCCTGAACATCACCAAGGTATCCTTCTCAGACCGAGGTAAATACACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361618.4
ENST00000393704.3
ENST00000502832.1
ENST00000507601.1
ENST00000512698.1
CDS GCA 72 bp TTGCTTCCGAAAGCTTCTCAGGCCTTCCCGGGCGACTaGGCTGTAAGTCTTAAACGTCTCTTAAAGCAAAGT +
Preference number: 6 (lower is better)
Translates to: LLPKASQAFPGD*AVSLKRLLKQS
Trigger: ACTTTGCTTTAAGAGACGTTTAAGACTTACAGCGCAGTCGCCCGGGAAGGCCTGAGAAGCTTTCGGAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393702.7
CDS CCA 72 bp TTAGAAGAGGAGGGCTCTCAAGCTCAGGGGAGGCTCTaGCAGCATCATTGTGATCTCAGTAGGAATAACTGT +
Preference number: 6 (lower is better)
Translates to: LEEEGSQAQGRL*QHHCDLSRNNC
Trigger: ACAGTTATTCCTACTGAGATCACAATGATGCTGCCAGAGCCTCCCCTGAGCTTGAGAGCCCTCCTCTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506110.1
ENST00000514683.1
CDS CAA 90 bp TTAGAAGCCACACACGTGTATTTACCTCGGTCTGAGAAGGATACCTaGGTGATGTTCAGGAGGCCGCTGTCGTGCATTTGCCATTTTCCT +
Preference number: 6 (lower is better)
Translates to: LEATHVYLPRSEKDT*VMFRRPLSCICHFP
Trigger: AGGAAAATGGCAAATGCACGACAGCGGCCTCCTGAACATCACCAAGGTATCCTTCTCAGACCGAGGTAAATACACGTGTGTGGCTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361618.4
ENST00000393704.3
ENST00000502832.1
ENST00000507601.1
ENST00000512698.1
CDS GCA 72 bp AAGGATACCTTGGTGATGTTCAGGAGGCCGCTGTCGTaGATTTGCCATTTTCCTTTTCAGCAGAAACGAGAC +
Preference number: 6 (lower is better)
Translates to: KDTLVMFRRPLS*ICHFPFQQKRD
Trigger: GTCTCGTTTCTGCTGAAAAGGAAAATGGCAAATGCACGACAGCGGCCTCCTGAACATCACCAAGGTATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502832.1
CDS CCA 72 bp TGCTTTAGGGTCCATGTAAAAGGGAGATCCAGGTCTTaGGTCTTTCTTCCCTTTGATTCAGTCACCGTGGGT +
Preference number: 6 (lower is better)
Translates to: CFRVHVKGRSRS*VFLPFDSVTVG
Trigger: ACCCACGGTGACTGAATCAAAGGGAAGAAAGACCCAAGACCTGGATCTCCCTTTTACATGGACCCTAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393704.3
ENST00000502832.1
CDS CAA 72 bp GAATGTTCCGCCGACAGTTCTGTCTCCTCTACATCTTaGACTTCAAACTGTCCACCCTCTTGGTCATCTGCA +
Preference number: 6 (lower is better)
Translates to: ECSADSSVSSTS*TSNCPPSWSSA
Trigger: TGCAGATGACCAAGAGGGTGGACAGTTTGAAGTCAAAGATGTAGAGGAGACAGAACTGTCGGCGGAACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361618.4
ENST00000393704.3
CDS CAA 90 bp TTTCCTCCTCCTCTCTCCTTCTCATCCTCTTCTTCTTTCAGCAGCTaGCCAATGGAATTATACCACTTGAACTGTGGGTCAGGGATGCCA +
Preference number: 6 (lower is better)
Translates to: FPPPLSFSSSSSFSS*PMELYHLNCGSGMP
Trigger: TGGCATCCCTGACCCACAGTTCAAGTGGTATAATTCCATTGGCAAGCTGCTGAAAGAAGAAGAGGATGAGAAGGAGAGAGGAGGAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361618.4
CDS TCA 72 bp GACATGAAATTGCTCCTTTCCAGGCTAATCACAAAGTaGATGGCAGTGTGCTCCTTGAGTGACTCACCGATG +
Preference number: 6 (lower is better)
Translates to: DMKLLLSRLITK*MAVCSLSDSPM
Trigger: CATCGGTGAGTCACTCAAGGAGCACACTGCCATTCACTTTGTGATTAGCCTGGAAAGGAGCAATTTCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502832.1
CDS GCA 72 bp GTAAGATTTGAAGGACCCTGGAAGGCTAAGCAGGCTTaGTTTATATGGGTATCTCGCTTCTCTTCTTGGGAC +
Preference number: 6 (lower is better)
Translates to: VRFEGPWKAKQA*FIWVSRFSSWD
Trigger: GTCCCAAGAAGAGAAGCGAGATACCCATATAAAGCAAGCCTGCTTAGCCTTCCAGGGTCCTTCAAATCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514683.1
CDS GCA 72 bp CACAGTCAGATGGCTCTTCAATCGATCCATCTTCTTTaGTTGCTCTGTAAGGCAATAGAGAGATGGTTTGCC +
Preference number: 6 (lower is better)
Translates to: HSQMALQSIHLL*LLCKAIERWFA
Trigger: GGCAAACCATCTCTCTATTGCCTTACAGAGCAAGCAAAGAAGATGGATCGATTGAAGAGCCATCTGACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361618.4
ENST00000393702.7
ENST00000504999.1
ENST00000507601.1
ENST00000510306.1
CDS TCA 72 bp CTTCTTTCAGCAGCTTGCCAATGGAATTATACCACTTaGACTGTGGGTCAGGGATGCCATAAACACTACAGT +
Preference number: 6 (lower is better)
Translates to: LLSAACQWNYTT*TVGQGCHKHYS
Trigger: ACTGTAGTGTTTATGGCATCCCTGACCCACAGTTCAAGTGGTATAATTCCATTGGCAAGCTGCTGAAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361618.4
ENST00000393702.7
ENST00000504999.1
ENST00000506110.1
CDS CCA 72 bp AAAAAGGGCACAGAAGGTAGAAAGCACACAGTCAGATaGCTCTTCAATCGATCCATCTTCTTTGCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: KKGTEGRKHTVR*LFNRSIFFACS
Trigger: AGAGCAAGCAAAGAAGATGGATCGATTGAAGAGCCATCTGACTGTGTGCTTTCTACCTTCTGTGCCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361618.4
ENST00000393702.7
ENST00000504999.1
ENST00000506110.1
ENST00000506764.1
ENST00000507601.1
ENST00000510306.1
CDS CCA 72 bp CATCTTCTTTGCTTGCTCTGTAAGGCAATAGAGAGATaGTTTGCCAACCGAATCTTCTATCAGACAACACAC +
Preference number: 6 (lower is better)
Translates to: HLLCLLCKAIER*FANRIFYQTTH
Trigger: GTGTGTTGTCTGATAGAAGATTCGGTTGGCAAACCATCTCTCTATTGCCTTACAGAGCAAGCAAAGAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361618.4
ENST00000393702.7
ENST00000504999.1
ENST00000507601.1
ENST00000510306.1
CDS CAA 90 bp ACTTTTGGATTCTGGAAAAGTCGTGACTTGTATTTAGCTTGGAGTTaGTTCTTCTTGTTCATAATTTCCTCAGGAAGGAAGGAAAGCCAG +
Preference number: 6 (lower is better)
Translates to: TFGFWKSRDLYLAWS*FFLFIISSGRKESQ
Trigger: CTGGCTTTCCTTCCTTCCTGAGGAAATTATGAACAAGAAGAACAAACTCCAAGCTAAATACAAGTCACGACTTTTCCAGAATCCAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514683.1