Pregenerated sensors for MEX3D (Homo sapiens)
Ensembl gene IDs: ENSG00000181588Ensembl transcript IDs: ENST00000402693.4, ENST00000402693.5, ENST00000605173.2
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCTCCTCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCCCTGGCCCCCGCAGATaGCCCCGGCCACGTGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: PPLERLCGLRPAGEKSQIPGPRR*PRPRGG Trigger: ACCACCACGTGGCCGGGGCCATCTGCGGGGGCCAGG...GATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGAGGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000402693.4 |
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| CDS-3UTR TCA 90 bp | CCTCCTCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCCTGTCGTTGAAGGGCTaGGGCGCCGCCGGGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: PPLERLCGLRPAGEKSQILSLKG*GAAGLR Trigger: CCGCAGCCCGGCGGCGCCTCAGCCCTTCAACGACAG...GATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CCA 90 bp | CCTCCTCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCTCTGTCCGGGAAGGTTaGGCGGGCCCTGGGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: PPLERLCGLRPAGEKSQISVREG*AGPGRR Trigger: GCGCCGCCCAGGGCCCGCCCAACCTTCCCGGACAGA...GATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CCA 90 bp | CCTCCTCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGCCGCTGTAGGGGCTaGCGGGGCCTGGGTCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: PPLERLCGLRPAGEKSQISRCRG*RGLGPA Trigger: TGCCGGACCCAGGCCCCGCCAGCCCCTACAGCGGCT...GATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR TCA 90 bp | CCTCCTCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCTCCGGCCGGTCACGATaGAGACCGGCTCCTCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: PPLERLCGLRPAGEKSQISGRSR*RPAPRP Trigger: GGGGCGAGGAGCCGGTCTTCATCGTGACCGGCCGGA...GATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGAGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR TCA 90 bp | TCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAACCGTGGAGCAGCCGCTaGAGGCGGGCAAGGGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SGTSVRPETGRREKSNQKPWSSR*RRARGR Trigger: CCGCCCCCTTGCCCGCCTTCAGCGGCTGCTCCACGG...TTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CCA 90 bp | CTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAAGCAGCGAGGTGGCCGTaGAGAAGGCGGCGCCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LERLCGLRPAGEKSQIRKAARWP*RRRRRL Trigger: CAGGCGGCGCCGCCTTCTCCACGGCCACCTCGCTGC...TTTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR GCA 90 bp | TCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAAGGCGAAGCCCCCGTTaGCGGAGCCGCTGTAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SGTSVRPETGRREKSNQKRRSPR*RSRCRG Trigger: GCCCCTACAGCGGCTCCGGCAACGGGGGCTTCGCCT...TTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAACCTGGTTGGGGGTCTTaGCCCAGAGGCTGGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SGTSVRPETGRREKSNQKPGWGS*PRGWRP Trigger: CGGCCGCCAGCCTCTGGGCCAAGACCCCCAACCAGG...TTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CCA 90 bp | CTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAAGGGGGCCGTCGTCCCTaGTTGGGGGTCTTGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LERLCGLRPAGEKSQIRKGGRRP*LGVLAQ Trigger: CTGGGCCAAGACCCCCAACCAGGGACGACGGCCCCC...TTTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CCA 90 bp | CTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAAAAGGCGCCCAGATGGTaGCCGCGGCGGGCACGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LERLCGLRPAGEKSQIRKKAPRW*PRRARS Trigger: TGACCGTGCCCGCCGCGGCCACCATCTGGGCGCCTT...TTTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAATGCTGGGCAGCGAGGTaGCCGTGGAGAAGGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SGTSVRPETGRREKSNQKCWAAR*PWRRRR Trigger: GCGCCGCCTTCTCCACGGCCACCTCGCTGCCCAGCA...TTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAATCCACGCGAATGGCCTaGGTGGCCGGCGTGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SGTSVRPETGRREKSNQKSTRMA*VAGVRQ Trigger: CTGCCGCACGCCGGCCACCCAGGCCATTCGCGTGGA...TTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAACCGTCTCCACGCGAATaGCCTGGGTGGCCGGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: SGTSVRPETGRREKSNQKPSPRE*PGWPAC Trigger: GCACGCCGGCCACCCAGGCCATTCGCGTGGAGACGG...TTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR GCA 90 bp | CTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAAACGCCGAAGGGGGCTTaGGGCTGTTCTCGGAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: LERLCGLRPAGEKSQIRKTPKGA*GCSRRR Trigger: GCGCCTCCGAGAACAGCCGCAAGCCCCCTTCGGCGT...TTTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR GCA 90 bp | CTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAACCTCTGGAACGTCTGTaGGGCCTGAGACCGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: LERLCGLRPAGEKSQIRKPLERL*GLRPAG Trigger: GCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGAGG...TTTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAGCCGTCGTCCCTGGTTaGGGGTCTTGGCCCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SGTSVRPETGRREKSNQKAVVPG*GSWPRG Trigger: GCCTCTGGGCCAAGACCCCCAACCAGGGACGACGGC...TTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR TCA 90 bp | CTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAATGCGCGTGGCGCGGATaGTGGAGAAGTGTTCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: LERLCGLRPAGEKSQIRKCAWRG*WRSVRP Trigger: CGGCCGAACACTTCTCCATCATCCGCGCCACGCGCA...TTTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR GCA 90 bp | CTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAACCAGGCAGACGTCGGTaGCGTTGGCGTGGAAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: LERLCGLRPAGEKSQIRKPGRRR*RWRGSR Trigger: GCGACTTCCACGCCAACGGCACCGACGTCTGCCTGG...TTTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR GCA 90 bp | TCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAACGCTCTTGCCGCAGATaGGGACGGCGCAGTCCATGC | + |
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Preference number: 4 (lower is better) Translates to: SGTSVRPETGRREKSNQKRSCRR*GRRSPC Trigger: GCATGGACTGCGCCGTCCGCATCTGCGGCAAGAGCG...TTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR TCA 90 bp | CCTCCTCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCCCCGCACTGGGGTCTTaGTGTAGGTGTTTGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PPLERLCGLRPAGEKSQIPALGS*CRCLSW Trigger: CCAAGACAAACACCTACATCAAGACCCCAGTGCGGG...GATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGAGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR TCA 90 bp | CTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAAAACGTCTGTGCGGCCTaGGACCGGCCGGCGAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: LERLCGLRPAGEKSQIRKNVCAA*DRPARK Trigger: TTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTT...TTTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAACGCGCACCTGGATGGTaGTCTGTCCGGGAAGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SGTSVRPETGRREKSNQKRAPGW*SVREGW Trigger: CCAACCTTCCCGGACAGACCACCATCCAGGTGCGCG...TTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CCA 90 bp | CTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAAGCACGCGCACCTGGATaGTGGTCTGTCCGGGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: LERLCGLRPAGEKSQIRKARAPG*WSVREG Trigger: ACCTTCCCGGACAGACCACCATCCAGGTGCGCGTGC...TTTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAATTGATCTTGCAGCCCTaGCGACCCACGATCTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: SGTSVRPETGRREKSNQKLILQP*RPTISA Trigger: CGCCGAGATCGTGGGTCGCCAGGGCTGCAAGATCAA...TTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR TCA 90 bp | CCTCCTCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAGTTAGAAATTTaGTTGGAACGCCCCTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: PPLERLCGLRPAGEKSQIRKLEI*LERPSP Trigger: GGGCGAGGGGCGTTCCAATCAAATTTCTAACTTTCT...GATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAACAGGATCTCACGCTTaGCCATCTCCACGTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SGTSVRPETGRREKSNQKTGSHA*PSPRPP Trigger: AGGAGGACGTGGAGATGGCCAAGCGTGAGATCCTGT...TTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCCGCAGGGCCTTGATCTaGCAGCCCTGGCGACCCACG | + |
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Preference number: 5 (lower is better) Translates to: PPLERLCGLRPAGEKSQIRRALI*QPWRPT Trigger: CGTGGGTCGCCAGGGCTGCAAGATCAAGGCCCTGCG...GATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGAGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CAA 90 bp | TCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAGGCAGACCCCCGGCCTaGCTGCGCGTGGCGCGGATG | + |
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Preference number: 5 (lower is better) Translates to: SGTSVRPETGRREKSNQKGRPPA*LRVARM Trigger: CATCCGCGCCACGCGCAGCAAGGCCGGGGGTCTGCC...TTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CAA 90 bp | TCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAACCCTGGTTGGGGGTCTaGGCCCAGAGGCTGGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: SGTSVRPETGRREKSNQKPWLGV*AQRLAA Trigger: GGCCGCCAGCCTCTGGGCCAAGACCCCCAACCAGGG...TTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CAA 90 bp | TCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAGACGCCGAAGGGGGCTaGCGGCTGTTCTCGGAGGCG | + |
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Preference number: 5 (lower is better) Translates to: SGTSVRPETGRREKSNQKDAEGG*RLFSEA Trigger: CGCCTCCGAGAACAGCCGCAAGCCCCCTTCGGCGTC...TTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTCTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCGACAGGATCTCACGCTaGGCCATCTCCACGTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: PPLERLCGLRPAGEKSQIDRISR*AISTSS Trigger: GGAGGACGTGGAGATGGCCAAGCGTGAGATCCTGTC...GATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAGAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS-3UTR CAA 90 bp | CTGGAACGTCTGTGCGGCCTGAGACCGGCCGGCGAGAAAAGTCAAATCAGAAAACAGAAAGTTAGAAATTaGATTGGAACGCCCCTCGCC | + |
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Preference number: 5 (lower is better) Translates to: LERLCGLRPAGEKSQIRKQKVRN*IGTPLA Trigger: GGCGAGGGGCGTTCCAATCAAATTTCTAACTTTCTG...TTTTCTGATTTGACTTTTCTCGCCGGCCGGTCTCAGGCCGCACAGACGTTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000605173.2 |
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| CDS CCA 72 bp | CGGGCAAGGGGGCGGCGCGCTCAAAAGGCGCCCAGATaGTGGCCGCGGCGGGCACGGTCAGGTCCAGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: RARGRRAQKAPR*WPRRARSGPAP Trigger: TGGCGCTGGACCTGACCGTGCCCGCCGCGGCCACCATCTGGGCGCCTTTTGAGCGCGCCGCCCCCTTGCCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000402693.5 ENST00000605173.2 |
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| CDS CCA 72 bp | GCAAGGGGGCGGCGCGCTCAAAAGGCGCCCAGATGGTaGCCGCGGCGGGCACGGTCAGGTCCAGCGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: ARGRRAQKAPRW*PRRARSGPAPG Trigger: TCCTGGCGCTGGACCTGACCGTGCCCGCCGCGGCCACCATCTGGGCGCCTTTTGAGCGCGCCGCCCCCTTGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000402693.5 ENST00000605173.2 |
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| CDS TCA 72 bp | CGGGCAGACCCCCGGCCTTGCTGCGCGTGGCGCGGATaGTGGAGAAGTGTTCGGCCGCCGACAGGATCTCAC | + |
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Preference number: 6 (lower is better) Translates to: RADPRPCCAWRG*WRSVRPPTGSH Trigger: GTGAGATCCTGTCGGCGGCCGAACACTTCTCCATCATCCGCGCCACGCGCAGCAAGGCCGGGGGTCTGCCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000402693.5 ENST00000605173.2 |
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| CDS CCA 72 bp | CCACGTGGTGGTCCGCGCTCTAGGAAAAGATATGAATaGCCTGGGTGGCCGGCGTGCGGCAGGCGGGACACT | + |
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Preference number: 6 (lower is better) Translates to: PRGGPRSRKRYE*PGWPACGRRDT Trigger: AGTGTCCCGCCTGCCGCACGCCGGCCACCCAGGCCATTCATATCTTTTCCTAGAGCGCGGACCACCACGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402693.5 |
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