RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METTL21A (Homo sapiens)

Ensembl gene IDs: ENSG00000144401

Ensembl transcript IDs: ENST00000272839.7, ENST00000406927.6, ENST00000411432.5, ENST00000425132.5, ENST00000426075.5, ENST00000432416.5, ENST00000442521.1, ENST00000448007.6, ENST00000448823.2, ENST00000458426.5, ENST00000461419.6, ENST00000471128.1

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCTCTGCCCCGCCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTaGGCCGCAGCCCTGTCTGGGAGGTGGGGAGCGTCTCTGCCCGGC +
Preference number: 1 (lower is better)
Translates to: TSAPPPCLGCEERLC*AAALSGRWGASLPG
Trigger: GCCGGGCAGAGACGCTCCCCACCTCCCAGACAGGGCTGCGGCCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGCGGGGCAGAGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR GCA 90 bp AGCACCTCTGCCCCGCCGCCCTGTCTGGGATGTGAGGAGCGCCTCTaGTGGGCCGCAGCCCTGTCTGGGAGGTGGGGAGCGTCTCTGCCC +
Preference number: 1 (lower is better)
Translates to: STSAPPPCLGCEERL*WAAALSGRWGASLP
Trigger: GGGCAGAGACGCTCCCCACCTCCCAGACAGGGCTGCGGCCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGCGGGGCAGAGGTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR TCA 90 bp CTGAGATGTGGGGAGCACCTCTGCCCCGCCGCCCTGTCTGGGATGTaGGGAGCGCCTCTGCTGGGCCGCAGCCCTGTCTGGGAGGTGGGG +
Preference number: 1 (lower is better)
Translates to: LRCGEHLCPAALSGM*GAPLLGRSPVWEVG
Trigger: CCCCACCTCCCAGACAGGGCTGCGGCCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGCGGGGCAGAGGTGCTCCCCACATCTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR CCA 90 bp TGGCGTGATCTCGGCTCGCTGCAACCACCTCCCAGCCGCCTGCCTTaGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCTGGCCGCCAC +
Preference number: 1 (lower is better)
Translates to: WRDLGSLQPPPSRLP*PPGEPRLQPLPGRH
Trigger: GTGGCGGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGGGAGGCCAAGGCAGGCGGCTGGGAGGTGGTTGCAGCGAGCCGAGATCACGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR GCA 90 bp TGCAGTGGCGTGATCTCGGCTCGCTGCAACCACCTCCCAGCCGCCTaGCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCTGGCC +
Preference number: 1 (lower is better)
Translates to: CSGVISARCNHLPAA*LGLPESRDCSLCLA
Trigger: GGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGGGAGGCCAAGGCAGGCGGCTGGGAGGTGGTTGCAGCGAGCCGAGATCACGCCACTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR TCA 90 bp GCCCTGTCTGGGAGGTGGGGAGCGTCTCTGCCCGGCCGCTCCGTCTaGGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGA +
Preference number: 1 (lower is better)
Translates to: ALSGRWGASLPGRSV*EVRKPSAWQPPRLR
Trigger: TCTCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGAGCGGCCGGGCAGAGACGCTCCCCACCTCCCAGACAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR GCA 90 bp AGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTaGCCGGCCGCCATCCCATCTGGGAAGCGAGGAGCGCCTCTTCCC +
Preference number: 1 (lower is better)
Translates to: SPSAWLPSLESEERL*PAAIPSGKRGAPLP
Trigger: GGGAAGAGGCGCTCCTCGCTTCCCAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR GCA 90 bp GCCTCTGCCTGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTaGTTGGCCACCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTG +
Preference number: 1 (lower is better)
Translates to: ASAWPPPRLGSEERL*LATHRLGCEEPLCL
Trigger: CAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCAGGCAGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR CCA 90 bp CTGCCTGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTaGCCACCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTG +
Preference number: 1 (lower is better)
Translates to: LPGRHPVWEVRSVSA*PPIVWDVRSPSAWL
Trigger: CAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCAGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR TCA 90 bp GGAAGCGAGGAGCGCCTCTTCCCCGCCGCCATCCCATCTAGGAAGTaGGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGA +
Preference number: 1 (lower is better)
Translates to: GSEERLFPAAIPSRK*GASLPGRPSSEMWG
Trigger: TCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCGGGGAAGAGGCGCTCCTCGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR TCA 90 bp CTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTaGGGAGCGTCTCTGCCCGGCCGCCATCCCATCTGGGAAGCGAGG +
Preference number: 1 (lower is better)
Translates to: LGCEEPLCLAAQSGK*GASLPGRHPIWEAR
Trigger: CCTCGCTTCCCAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR CCA 90 bp TCTGCTTGGCCACCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTaGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCC +
Preference number: 1 (lower is better)
Translates to: SAWPPIVWDVRSPSA*LPSLESEERLCPAA
Trigger: GGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGTGGCCAAGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR CCA 90 bp CCCGGAGAGCCGAGATTGCAGCCTCTGCCTGGCCGCCACCCCGTCTaGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGAT +
Preference number: 1 (lower is better)
Translates to: PGEPRLQPLPGRHPV*EVRSVSAWPPIVWD
Trigger: ATCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR TCA 90 bp CTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTaGTTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGC +
Preference number: 1 (lower is better)
Translates to: LDGTAAISAHCNLPA*FSCLSLPSACDCRR
Trigger: GCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR GCA 90 bp GATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCTCGCTGCAACCACCTCCCAGCCGCC +
Preference number: 1 (lower is better)
Translates to: DGVSFTQCSMVPRLE*SGVISARCNHLPAA
Trigger: GGCGGCTGGGAGGTGGTTGCAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR CCA 90 bp CCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTaGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGT +
Preference number: 1 (lower is better)
Translates to: PVWEVRSVSAWPPIV*DVRSPSAWLPSLES
Trigger: ACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCTCACTTCCCAGACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR GCA 90 bp AAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTaGCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAG +
Preference number: 1 (lower is better)
Translates to: KAGRYCCHLGSLQPP*LILLPQPAECLRLQ
Trigger: CTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR GCA 90 bp AGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACACTaGGGAAGGCCAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGA +
Preference number: 1 (lower is better)
Translates to: SHHHSLILSTQGHKH*GRPRPQGPLPRKTR
Trigger: TCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR GCA 90 bp AATTTCTTCCTCACTTCTGTTACATTTTGGCAGCTGCAGGTCAGTTaGTGTGGCTCTCCTTCATGTGCCCATCTGGGTCTAGGATCCTGG +
Preference number: 1 (lower is better)
Translates to: NFFLTSVTFWQLQVS*CGSPSCAHLGLGSW
Trigger: CCAGGATCCTAGACCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGTGAGGAAGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR GCA 90 bp CAGTGTCTTAAAATTTCTTCCTCACTTCTGTTACATTTTGGCAGCTaGAGGTCAGTTGCTGTGGCTCTCCTTCATGTGCCCATCTGGGTC +
Preference number: 1 (lower is better)
Translates to: QCLKISSSLLLHFGS*RSVAVALLHVPIWV
Trigger: GACCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGTGAGGAAGAAATTTTAAGACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR-3UTR TCA 90 bp GCCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCTGGCCGCCACCCCGTGCCCTGTCTGGGATGTaGGGAGCGCCTCTGCTGGGC +
Preference number: 2 (lower is better)
Translates to: ALASRRAEIAASAWPPPRALSGM*GAPLLG
Trigger: GCCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGC...ACGGGGTGGCGGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGGGAGGCCAAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR GCA 90 bp GATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCGGTGAGGGGCGCTTCTaGCCGGCCGCCCCTACTGGG +
Preference number: 2 (lower is better)
Translates to: DAEPRLDGTAAISAHCNLGEGRF*PAAPTG
Trigger: CCCAGTAGGGGCGGCCGGGCAGAAGCGCCCCTCACC...GAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR CAA 90 bp TCTGCCTGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTaGGCCACCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: SAWPPPRLGSEERLC*ATHRLGCEEPLCLA
Trigger: AGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCAGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR TCA 90 bp GATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCGCCCCTACTGGGAAGTaGGGAGCCCCTCTGCCCGGC +
Preference number: 2 (lower is better)
Translates to: DAEPRLDGTAAISAHCNLAPTGK*GAPLPG
Trigger: GCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGC...GAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR TCA 90 bp GATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCGCCCCGTCTGAGAAGTaGGGAGCCCCTCCGTCCGGC +
Preference number: 2 (lower is better)
Translates to: DAEPRLDGTAAISAHCNLAPSEK*GAPPSG
Trigger: GCCGGACGGAGGGGCTCCTCACTTCTCAGACGGGGC...GAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR CCA 90 bp GCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCGGTCATCCTCCCACCTaGCCAGCTGCCCCATCCGGG +
Preference number: 2 (lower is better)
Translates to: ASASRGAGIADGVSFTQCGHPPT*PAAPSG
Trigger: CCCGGATGGGGCAGCTGGCCAGGTGGGAGGATGACC...GCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR CCA 90 bp GATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCGAGGAGCGCCTCTGCTaGGCCGCAGCCCTGTCTGGG +
Preference number: 2 (lower is better)
Translates to: DAEPRLDGTAAISAHCNLEERLC*AAALSG
Trigger: CCCAGACAGGGCTGCGGCCCAGCAGAGGCGCTCCTC...GAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR TCA 90 bp GATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCGCCCCTACTGGGAAGTaGGGAGCCCCTCTGCCTGGC +
Preference number: 2 (lower is better)
Translates to: DAEPRLDGTAAISAHCNLAPTGK*GAPLPG
Trigger: GCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGC...GAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR TCA 90 bp GATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCGGCAACCGCCCCGTCTaGGAAGTGAGGAGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: DAEPRLDGTAAISAHCNLGNRPV*EVRSPS
Trigger: GGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCC...GAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR TCA 90 bp GCCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCTGGCCGCCACCCCGTGCCTTGGGATCCTGTTaGTCTGTGACCTTATCCCCA +
Preference number: 2 (lower is better)
Translates to: ALASRRAEIAASAWPPPRALGSC*SVTLSP
Trigger: TGGGGATAAGGTCACAGATCAACAGGATCCCAAGGC...ACGGGGTGGCGGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGGGAGGCCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR TCA 90 bp GCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCACCCCGTCTGGGAAGTaGGGAGCGTCTCTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: ASASRGAGIADGVSFTQCTPSGK*GASLLG
Trigger: GCCAAGCAGAGACGCTCCTCACTTCCCAGACGGGGT...GCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR GCA 90 bp CCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCGAGAAATCGGATGGTTaGCGGGTCTGTGTGGATAGA +
Preference number: 2 (lower is better)
Translates to: PGHDPVWEVCPAAHWGWAEKSDG*RVCVDR
Trigger: TCTATCCACACAGACCCGGCAACCATCCGATTTCTC...GGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR GCA 90 bp TGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGAGTGAGGAGCCCCTCTaGCCGGCCAGCCGCCCCGTC +
Preference number: 2 (lower is better)
Translates to: CRWSLVHSVLNGAQAGVQSEEPL*PASRPV
Trigger: GACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACT...CTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR GCA 90 bp GCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCGCCCCTCTGCCTGGCTaGCCAGTCTGGAAAGTGAGG +
Preference number: 2 (lower is better)
Translates to: ASASRGAGIADGVSFTQCAPLPG*PVWKVR
Trigger: CCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGC...GCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR GCA 90 bp GCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCGTGCCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: ASASRGAGIADGVSFTQCVPRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGGCAC...GCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR CCA 90 bp TGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGGCCCTGTCTGGGAGGTaGGGAGCGTCTCTGCCCGGC +
Preference number: 2 (lower is better)
Translates to: CRWSLVHSVLNGAQAGVQALSGR*GASLPG
Trigger: GCCGGGCAGAGACGCTCCCCACCTCCCAGACAGGGC...CTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR GCA 90 bp TGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCACGATGACAATGGCGGTTCAGGGACACAAACACTaGGGAAGGCCAAGGCCGCAG +
Preference number: 2 (lower is better)
Translates to: WEVCPAAHWGWATMTMAVQGHKH*GRPRPQ
Trigger: CTGCGGCCTTGGCCTTCCGCAGTGTTTGTGTCCCTG...AACCGCCATTGTCATCGTGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR GCA 90 bp TGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGCCGGAGAGCCGAGATTaGAGCCTCTGCCTGGCCGCC +
Preference number: 2 (lower is better)
Translates to: CRWSLVHSVLNGAQAGVQPESRD*SLCLAA
Trigger: GGCGGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGG...CTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR CCA 90 bp GATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCTGGCCACCCATCGTCTaGGATGTGAGGAGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: DAEPRLDGTAAISAHCNLWPPIV*DVRSPS
Trigger: AGAGGGGCTCCTCACATCCCAGACGATGGGTGGCCA...GAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR GCA 90 bp TGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGCGAGATTGCAGCCTCTaGCTGGCCGCCACCCCGTCT +
Preference number: 2 (lower is better)
Translates to: CRWSLVHSVLNGAQAGVQRDCSL*LAATPS
Trigger: AGACGGGGTGGCGGCCAGGCAGAGGCTGCAATCTCG...CTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR GCA 90 bp GATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCGAGGTGCCGGGATTaGAGATGGAGTCTCGTTCAC +
Preference number: 2 (lower is better)
Translates to: DAEPRLDGTAAISAHCNLPRCRD*RWSLVH
Trigger: GTGAACGAGACTCCATCTGCAATCCCGGCACCTCGG...GAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR CCA 90 bp GCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCGTTGCCGGGTCTGTGTaGATAGAAGTAGACATGGGA +
Preference number: 2 (lower is better)
Translates to: ASASRGAGIADGVSFTQCVAGSV*IEVDMG
Trigger: TCCCATGTCTACTTCTATCCACACAGACCCGGCAAC...GCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR GCA 90 bp CTTACACTCTACAGGGCAATACTACCACTGAATGAGCAATTACAAGTCCAATACTGTGGGGAGCACCTCTaGCCCGCCGCCCTGTCTGGG +
Preference number: 2 (lower is better)
Translates to: LTLYRAILPLNEQLQVQYCGEHL*PAALSG
Trigger: CCCAGACAGGGCGGCGGGGCAGAGGTGCTCCCCACA...GTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR TCA 90 bp CTTACACTCTACAGGGCAATACTACCACTGAATGAGCAATTACAAGTCCAATACACCCCGTCTGGGAAGTaGGGAGCGTCTCCGCCCAGC +
Preference number: 2 (lower is better)
Translates to: LTLYRAILPLNEQLQVQYTPSGK*GASPPS
Trigger: GCTGGGCGGAGACGCTCCTCACTTCCCAGACGGGGT...GTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR GCA 90 bp GCAATACTACCACTGAATGAGCAATTACAAGTCCAATACAAAAGGAGCTTATATGGTGAGGGGCGCCTCTaGCCGGCCGCCCCTACTGGA +
Preference number: 2 (lower is better)
Translates to: AILPLNEQLQVQYKRSLYGEGRL*PAAPTG
Trigger: TCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACC...ATATAAGCTCCTTTTGTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR TCA 90 bp CTTACACTCTACAGGGCAATACTACCACTGAATGAGCAATTACAAGTCCAATACTGGAGTGCAGTGGCGTaGTCTCGGCTCGCTGCAACC +
Preference number: 2 (lower is better)
Translates to: LTLYRAILPLNEQLQVQYWSAVA*SRLAAT
Trigger: GGTTGCAGCGAGCCGAGATCACGCCACTGCACTCCA...GTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR GCA 90 bp CTTACACTCTACAGGGCAATACTACCACTGAATGAGCAATTACAAGTCCAATACTGTGAGGAGCCCCTCTaGCTGGCTGCCCAGTCTGGA +
Preference number: 2 (lower is better)
Translates to: LTLYRAILPLNEQLQVQYCEEPL*LAAQSG
Trigger: TCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACA...GTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR CAA 90 bp AAATTTCTTCCTCACTTCTGTTACATTTTGGCAGCTGCAGGTCAGTaGCTGTGGCTCTCCTTCATGTGCCCATCTGGGTCTAGGATCCTG +
Preference number: 2 (lower is better)
Translates to: KFLPHFCYILAAAGQ*LWLSFMCPSGSRIL
Trigger: CAGGATCCTAGACCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGTGAGGAAGAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR-3UTR TCA 90 bp CTTACACTCTACAGGGCAATACTACCACTGAATGAGCAATTACAAGTCCAATACGCTCCGTCTGAGAAGTaGGGAAACCCTCTGCCTGGC +
Preference number: 2 (lower is better)
Translates to: LTLYRAILPLNEQLQVQYAPSEK*GNPLPG
Trigger: GCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGAGC...GTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR CCA 90 bp GCAATACTACCACTGAATGAGCAATTACAAGTCCAATACAAAAGGAGCTTATATGGCCGCAGCCCTGTCTaGGAGGTGGGGAGCGTCTCT +
Preference number: 2 (lower is better)
Translates to: AILPLNEQLQVQYKRSLYGRSPV*EVGSVS
Trigger: AGAGACGCTCCCCACCTCCCAGACAGGGCTGCGGCC...ATATAAGCTCCTTTTGTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR TCA 90 bp GCAATACTACCACTGAATGAGCAATTACAAGTCCAATACAAAAGGAGCTTATATGTCCCTACTGGGAAGTaGGGAGCCCCTCTGCCTGGC +
Preference number: 2 (lower is better)
Translates to: AILPLNEQLQVQYKRSLYVPTGK*GAPLPG
Trigger: GCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGAC...ATATAAGCTCCTTTTGTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR TCA 90 bp ACTTCTGTTACATTTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTCGTTACATCTACTCGTaGTCTGTTAGCCACAGCACA +
Preference number: 2 (lower is better)
Translates to: TSVTFWQLQVSCCGSPSCRYIYS*SVSHST
Trigger: TGTGCTGTGGCTAACAGATCACGAGTAGATGTAACG...ACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR-3UTR CCA 90 bp ACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGTCTTGTCCCCCAGGCTaGAGTACAATGGTGCAATCT +
Preference number: 2 (lower is better)
Translates to: TLCSLKHVLCPLRVKWIKSCPPG*STMVQS
Trigger: AGATTGCACCATTGTACTCCAGCCTGGGGGACAAGA...CTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR CCA 90 bp CTTACACTCTACAGGGCAATACTACCACTGAATGAGCAATTACAAGTCCAATACCCTGGCTGCCCAGTCTaGAAAGTGAGGAGCGTCTCT +
Preference number: 2 (lower is better)
Translates to: LTLYRAILPLNEQLQVQYPGCPV*KVRSVS
Trigger: AGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGG...GTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR GCA 90 bp TTTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTGCCCATCTGGGTGCTTTTGAAAGCATTTaGTTGATTTTGGTGAACGTT +
Preference number: 2 (lower is better)
Translates to: FWQLQVSCCGSPSCAHLGAFESI*LILVNV
Trigger: AACGTTCACCAAAATCAAGCAAATGCTTTCAAAAGC...ACCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR CAA 90 bp ACGAATCTCAGTGTCTTAAAATTTCTTCCTCACTTCTGTTACATTTaGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTGCCCA +
Preference number: 2 (lower is better)
Translates to: TNLSVLKFLPHFCYI*AAAGQLLWLSFMCP
Trigger: TGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGTGAGGAAGAAATTTTAAGACACTGAGATTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR-3UTR CCA 90 bp TGCTTGATTTTGGTGAACGTTACATCTACTCGTGATCTGTTAGCCACAGCACAGCAAGCCCAAAGTCAGTaGAGTGGGAATGAACTCTTC +
Preference number: 2 (lower is better)
Translates to: CLILVNVTSTRDLLATAQQAQSQ*SGNELF
Trigger: GAAGAGTTCATTCCCACTCCACTGACTTTGGGCTTG...CTGTGCTGTGGCTAACAGATCACGAGTAGATGTAACGTTCACCAAAATCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR-3UTR TCA 90 bp TTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACATCACATCCAGGTGTCTCCACTGTTaGGCTACCATTTTTCTCTTT +
Preference number: 2 (lower is better)
Translates to: FGEEFHRGIVCLSHNITSRCLHC*ATIFLF
Trigger: AAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCT...GGATGTGATGTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
3UTR-3UTR TCA 90 bp GCAATACTACCACTGAATGAGCAATTACAAGTCCAATACAAAAGGAGCTTATATGATCCTGTTGATCTGTaGCCTTATCCCCAACCCTGT +
Preference number: 2 (lower is better)
Translates to: AILPLNEQLQVQYKRSLYDPVDL*PYPQPC
Trigger: ACAGGGTTGGGGATAAGGTCACAGATCAACAGGATC...ATATAAGCTCCTTTTGTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR CCA 90 bp AGCTCTTCTGTTAATTTGTGTTGCTACAGTAACAACCACGAATCTCAGTGTCTTACTTCTGTTACATTTTaGCAGCTGCAGGTCAGTTGC +
Preference number: 2 (lower is better)
Translates to: SSSVNLCCYSNNHESQCLTSVTF*QLQVSC
Trigger: GCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGT...AAGACACTGAGATTCGTGGTTGTTACTGTAGCAACACAAATTAACAGAAGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR-3UTR TCA 90 bp TGTTGCTACAGTAACAACCACGAATCTCAGTGTCTTAAAATTTCTTCCTCACTTAGAGCAGCACGTCTTTaGGAAAAGGGCAATGCTTTT +
Preference number: 2 (lower is better)
Translates to: CCYSNNHESQCLKISSSLRAARL*EKGNAF
Trigger: AAAAGCATTGCCCTTTTCTCAAAGACGTGCTGCTCT...AAGTGAGGAAGAAATTTTAAGACACTGAGATTCGTGGTTGTTACTGTAGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR-3UTR GCA 90 bp GCAATACTACCACTGAATGAGCAATTACAAGTCCAATACAAAAGGAGCTTATATTTATCCCCAACCCTGTaGTCTCTGAAACATGTGCTG +
Preference number: 2 (lower is better)
Translates to: AILPLNEQLQVQYKRSLYLSPTL*SLKHVL
Trigger: CAGCACATGTTTCAGAGAGCACAGGGTTGGGGATAA...ATATAAGCTCCTTTTGTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR GCA 90 bp AATTATAGTCTCCTTCAGTCTGTGAAAGTTTGTTTCCTTGTCTTTGATGGCCTTATCACTTGGTTAAAGTaGTGTCCAGGTGTCTCCACT +
Preference number: 2 (lower is better)
Translates to: NYSLLQSVKVCFLVFDGLITWLK*CPGVST
Trigger: AGTGGAGACACCTGGACAGCACTTTAACCAAGTGAT...AAGGCCATCAAAGACAAGGAAACAAACTTTCACAGACTGAAGGAGACTATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
3UTR-3UTR GCA 90 bp CTTACACTCTACAGGGCAATACTACCACTGAATGAGCAATTACAAGTCCAATACAGCTTGGGAAAGAACTaGATTAAGACATTTGAGCAA +
Preference number: 2 (lower is better)
Translates to: LTLYRAILPLNEQLQVQYSLGKN*IKTFEQ
Trigger: TTGCTCAAATGTCTTAATGCAGTTCTTTCCCAAGCT...GTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR GCA 90 bp AGTTTTAAAAATACAGAGTTCCGGATACCCTTCATCCAGCTTTCTCTAATCTTAATCACTTGGTTAAAGTaGTGTCCAGGTGTCTCCACT +
Preference number: 2 (lower is better)
Translates to: SFKNTEFRIPFIQLSLILITWLK*CPGVST
Trigger: AGTGGAGACACCTGGACAGCACTTTAACCAAGTGAT...TAAGATTAGAGAAAGCTGGATGAAGGGTATCCGGAACTCTGTATTTTTAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458426.5
3UTR-3UTR TCA 90 bp AGTTTTAAAAATACAGAGTTCCGGATACCCTTCATCCAGCTTTCTCTAATCTTAGTCTCCTTCAGTCTGTaGAAGTTTGTTTCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: SFKNTEFRIPFIQLSLILVSFSL*KFVSLS
Trigger: AGACAAGGAAACAAACTTTCACAGACTGAAGGAGAC...TAAGATTAGAGAAAGCTGGATGAAGGGTATCCGGAACTCTGTATTTTTAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458426.5
3UTR-3UTR GCA 90 bp AATTATAGTCTCCTTCAGTCTGTGAAAGTTTGTTTCCTTGTCTTTGATGGCCTTCACAGAGGTATAGTGTaGCTTTCTCATAACATCACA +
Preference number: 2 (lower is better)
Translates to: NYSLLQSVKVCFLVFDGLHRGIV*LSHNIT
Trigger: TGTGATGTTATGAGAAAGGCACACTATACCTCTGTG...AAGGCCATCAAAGACAAGGAAACAAACTTTCACAGACTGAAGGAGACTATAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
3UTR-3UTR CCA 90 bp AATTATAGTCTCCTTCAGTCTGTGAAAGTTTGTTTCCTTGTCTTTGATGGCCTTTTAACTTTGATCACTTaGTTAAAGTGCTGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: NYSLLQSVKVCFLVFDGLLTLIT*LKCCPG
Trigger: ACCTGGACAGCACTTTAACCAAGTGATCAAAGTTAA...AAGGCCATCAAAGACAAGGAAACAAACTTTCACAGACTGAAGGAGACTATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
3UTR GCA 72 bp GCCCGGCCGTCCCTACTGGGAAGTGAGGAGCCCCTCTaGCTGGCCAGCCGCCCCGTCCGGGAGGGTGGTGGG +
Preference number: 3 (lower is better)
Translates to: ARPSLLGSEEPL*LASRPVREGGG
Trigger: CCCACCACCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGACGGCCGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR GCA 72 bp GCCCCGCCGCCCTGTCTGGGATGTGAGGAGCGCCTCTaGTGGGCCGCAGCCCTGTCTGGGAGGTGGGGAGCG +
Preference number: 3 (lower is better)
Translates to: APPPCLGCEERL*WAAALSGRWGA
Trigger: CGCTCCCCACCTCCCAGACAGGGCTGCGGCCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGCGGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR CCA 72 bp CCGCCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTaGGCCGCAGCCCTGTCTGGGAGGTGGGGAGCGTCT +
Preference number: 3 (lower is better)
Translates to: PPPCLGCEERLC*AAALSGRWGAS
Trigger: AGACGCTCCCCACCTCCCAGACAGGGCTGCGGCCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR CAA 90 bp GCCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCTGGCCGCCACCCCGTGAGGAGCGTCTCTGCTaGGCCACCCATCGTCTGGGA +
Preference number: 3 (lower is better)
Translates to: ALASRRAEIAASAWPPPREERLC*ATHRLG
Trigger: TCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCTC...ACGGGGTGGCGGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGGGAGGCCAAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR TCA 72 bp GGGAGGTGGGGAGCGTCTCTGCCCGGCCGCTCCGTCTaGGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCC +
Preference number: 3 (lower is better)
Translates to: GRWGASLPGRSV*EVRKPSAWQPP
Trigger: GGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGAGCGGCCGGGCAGAGACGCTCCCCACCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR TCA 72 bp GAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTaGGATGTGGGGAGCACCTCTGCCCCGCCGCCCTGT +
Preference number: 3 (lower is better)
Translates to: EVRSVSARPPIV*DVGSTSAPPPC
Trigger: ACAGGGCGGCGGGGCAGAGGTGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR TCA 72 bp GAGCGCCTCTTCCCCGCCGCCATCCCATCTAGGAAGTaGGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAG +
Preference number: 3 (lower is better)
Translates to: ERLFPAAIPSRK*GASLPGRPSSE
Trigger: CTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCGGGGAAGAGGCGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR TCA 72 bp GAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTaGGGAGCGTCTCTGCCCGGCCGCCATCCCATCTGG +
Preference number: 3 (lower is better)
Translates to: EEPLCLAAQSGK*GASLPGRHPIW
Trigger: CCAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR GCA 72 bp GCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTaGCCGGCCGCCATCCCATCTGGGAAGCGAGGAGCG +
Preference number: 3 (lower is better)
Translates to: AWLPSLESEERL*PAAIPSGKRGA
Trigger: CGCTCCTCGCTTCCCAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR GCA 72 bp GTGATCTCGGCTCGCTGCAACCACCTCCCAGCCGCCTaGCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: VISARCNHLPAA*LGLPESRDCSL
Trigger: GAGGCTGCAATCTCGGCTCTCCGGGAGGCCAAGGCAGGCGGCTGGGAGGTGGTTGCAGCGAGCCGAGATCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR GCA 72 bp TGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTaGTTGGCCACCCATCGTCTGGGATGTGAGGAGCCC +
Preference number: 3 (lower is better)
Translates to: WPPPRLGSEERL*LATHRLGCEEP
Trigger: GGGCTCCTCACATCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR GCA 72 bp ACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTaGCGAGTGCCTGCGATTGCAGGCGCGCACCGCCAC +
Preference number: 3 (lower is better)
Translates to: TATSLPDSPASA*RVPAIAGAHRH
Trigger: GTGGCGGTGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR CCA 72 bp CCGAGATTGCAGCCTCTGCCTGGCCGCCACCCCGTCTaGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATC +
Preference number: 3 (lower is better)
Translates to: PRLQPLPGRHPV*EVRSVSAWPPI
Trigger: GATGGGTGGCCAAGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCAGGCAGAGGCTGCAATCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR TCA 72 bp GGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGATGTaGGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAA +
Preference number: 3 (lower is better)
Translates to: GASLLGHPSSGM*GAPLPGCPVWK
Trigger: TTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGTGGCCAAGCAGAGACGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR GCA 72 bp CGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTaGCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTG +
Preference number: 3 (lower is better)
Translates to: RYCCHLGSLQPP*LILLPQPAECL
Trigger: CAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR CCA 72 bp GAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTaGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGT +
Preference number: 3 (lower is better)
Translates to: EVRSVSAWPPIV*DVRSPSAWLPS
Trigger: ACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCTCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR CCA 72 bp GCCAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATaGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAG +
Preference number: 3 (lower is better)
Translates to: ASLGLPRCRDCR*SLVHSVLNGAQ
Trigger: CTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR CCA 72 bp TCCCTCCACGGTCTCCCTCTGATGCCGAGCCAAGGCTaGACGGTACTGCTGCCATCTCGGCTCACTGCAACC +
Preference number: 3 (lower is better)
Translates to: SLHGLPLMPSQG*TVLLPSRLTAT
Trigger: GGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATCAGAGGGAGACCGTGGAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR TCA 72 bp AGGTGTGCCCAGCGGCTCATTGGGGATGGGCCACGATaGCAATGGCGGTTTTGTGGAATAGAAAGGCGGGAA +
Preference number: 3 (lower is better)
Translates to: RCAQRLIGDGPR*QWRFCGIERRE
Trigger: TTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCGTGGCCCATCCCCAATGAGCCGCTGGGCACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR GCA 72 bp CTCACTTCTGTTACATTTTGGCAGCTGCAGGTCAGTTaGTGTGGCTCTCCTTCATGTGCCCATCTGGGTCTA +
Preference number: 3 (lower is better)
Translates to: LTSVTFWQLQVS*CGSPSCAHLGL
Trigger: TAGACCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR CCA 72 bp TTCTGTTACATTTTGGCAGCTGCAGGTCAGTTGCTGTaGCTCTCCTTCATGTGCCCATCTGGGTCTAGGATC +
Preference number: 3 (lower is better)
Translates to: FCYILAAAGQLL*LSFMCPSGSRI
Trigger: GATCCTAGACCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR-3UTR CAA 90 bp GCAATACTACCACTGAATGAGCAATTACAAGTCCAATACAAAAGGAGCTTATATCCCGGAGAGCCGAGATaGCAGCCTCTGCCTGGCCGC +
Preference number: 3 (lower is better)
Translates to: AILPLNEQLQVQYKRSLYPGEPR*QPLPGR
Trigger: GCGGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGGG...ATATAAGCTCCTTTTGTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR TCA 72 bp CAGGCAAGGACAAGCCCAAAGTCAGTGGAGTGGGAATaGACTCTTCATAATCCAGTTTGGGTACCATATCGC +
Preference number: 3 (lower is better)
Translates to: QARTSPKSVEWE*TLHNPVWVPYR
Trigger: GCGATATGGTACCCAAACTGGATTATGAAGAGTTCATTCCCACTCCACTGACTTTGGGCTTGTCCTTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR-3UTR CAA 90 bp TTTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTGCCCATCTGGGTAGCATTTGCTTGATTTaGGTGAACGTTACATCTACT +
Preference number: 3 (lower is better)
Translates to: FWQLQVSCCGSPSCAHLGSICLI*VNVTST
Trigger: AGTAGATGTAACGTTCACCAAAATCAAGCAAATGCT...ACCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR TCA 72 bp CATTTGCTTGATTTTGGTGAACGTTACATCTACTCGTaGTCTGTTAGCCACAGCACAGGCAAGGACAAGCCC +
Preference number: 3 (lower is better)
Translates to: HLLDFGERYIYS*SVSHSTGKDKP
Trigger: GGGCTTGTCCTTGCCTGTGCTGTGGCTAACAGATCACGAGTAGATGTAACGTTCACCAAAATCAAGCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR GCA 72 bp AAAATTTCTTCCTCACTTCTGTTACATTTTGGCAGCTaGAGGTCAGTTGCTGTGGCTCTCCTTCATGTGCCC +
Preference number: 3 (lower is better)
Translates to: KISSSLLLHFGS*RSVAVALLHVP
Trigger: GGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGTGAGGAAGAAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR-3UTR CAA 90 bp TGTTGCTACAGTAACAACCACGAATCTCAGTGTCTTAAAATTTCTTCCTCACTTGCAGCTGCAGGTCAGTaGCTGTGGCTCTCCTTCATG +
Preference number: 3 (lower is better)
Translates to: CCYSNNHESQCLKISSSLAAAGQ*LWLSFM
Trigger: CATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGC...AAGTGAGGAAGAAATTTTAAGACACTGAGATTCGTGGTTGTTACTGTAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
3UTR TCA 72 bp CACTTGGTTAAAGTGCTGTCCAGGTGTCTCCACTGTTaGGCTACCATTTTTCTCTTTGTCCAGCCCATATTC +
Preference number: 3 (lower is better)
Translates to: HLVKVLSRCLHC*ATIFLFVQPIF
Trigger: GAATATGGGCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACTTTAACCAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
3UTR GCA 72 bp ATAGGTTTTGGGGAGGAATTCCACAGAGGTATAGTGTaGCTTTCTCATAACATCACATCCGGGAGCACATAC +
Preference number: 3 (lower is better)
Translates to: IGFGEEFHRGIV*LSHNITSGSTY
Trigger: GTATGTGCTCCCGGATGTGATGTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAAACCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
3UTR CCA 72 bp TCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATaGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAAC +
Preference number: 3 (lower is better)
Translates to: SLKHVLCPLRVK*IKGGARCALLN
Trigger: GTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR CAA 90 bp ATAATAGGTTTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACATTAACTTTGATCACTaGGTTAAAGTGCTGTCCAGG +
Preference number: 3 (lower is better)
Translates to: IIGFGEEFHRGIVCLSHNINFDH*VKVLSR
Trigger: CCTGGACAGCACTTTAACCAAGTGATCAAAGTTAAT...GTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAAACCTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
3UTR TCA 72 bp GGAGCTTACACTCTACAGGGCAATACTACCACTGAATaGGCAATTACAAGTCCAATACAAAAGGAGCTTATA +
Preference number: 3 (lower is better)
Translates to: GAYTLQGNTTTE*AITSPIQKELI
Trigger: TATAAGCTCCTTTTGTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAGCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR-3UTR CAA 90 bp AATTATAGTCTCCTTCAGTCTGTGAAAGTTTGTTTCCTTGTCTTTGATGGCCTTCTACCATTTTTCTCTTaGTCCAGCCCATATTCAAGG +
Preference number: 3 (lower is better)
Translates to: NYSLLQSVKVCFLVFDGLLPFFS*SSPYSR
Trigger: CCTTGAATATGGGCTGGACAAAGAGAAAAATGGTAG...AAGGCCATCAAAGACAAGGAAACAAACTTTCACAGACTGAAGGAGACTATAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
3UTR-3UTR CAA 90 bp AGTTTTAAAAATACAGAGTTCCGGATACCCTTCATCCAGCTTTCTCTAATCTTATCCCTCAGTTTGCATTaGTCCAGTGTTTTCTATGGA +
Preference number: 3 (lower is better)
Translates to: SFKNTEFRIPFIQLSLILSLSLH*SSVFYG
Trigger: TCCATAGAAAACACTGGACAAATGCAAACTGAGGGA...TAAGATTAGAGAAAGCTGGATGAAGGGTATCCGGAACTCTGTATTTTTAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458426.5
CDS-3UTR TCA 90 bp CCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGCCCCTACTGGGAAGTaGGGAGCCCCTCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: PIREVRGASARPPLLGSEAPTGK*GAPLPG
Trigger: GCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGC...CTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp GCCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCTGGCCGCCACCCCGTGGTGAGGGGCGCCTCTaGCCGGCCGCCCCTACTGGA +
Preference number: 4 (lower is better)
Translates to: ALASRRAEIAASAWPPPRGEGRL*PAAPTG
Trigger: TCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACC...ACGGGGTGGCGGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGGGAGGCCAAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp CCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCGAGGGCCATTCCGCCTaGACCCCGCCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PGHDPVWEVCPAAHWGWAEGHSA*TPPSAQ
Trigger: CTGAGCAGAGGGCGGGGTGCAGGCGGAATGGCCCTC...GGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp CCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGTCCCACCTGGCCAGCTaGCCCATCCGGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PIREVRGASARPPLLGSESHLAS*PIREGG
Trigger: ACCTCCCTCCCGGATGGGGCAGCTGGCCAGGTGGGA...CTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CCA 90 bp CCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCCCCGGCCGCCCCTACTaGGAAGTGAGGACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PGHDPVWEVCPAAHWGWAPGRPY*EVRTPL
Trigger: CAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGG...GGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CCA 90 bp CCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCCCCGGCCGTCCCTACTaGGAAGTGAGGAGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PGHDPVWEVCPAAHWGWAPGRPY*EVRSPS
Trigger: AGAGGGGCTCCTCACTTCCCAGTAGGGACGGCCGGG...GGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp GCCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCTGGCCGCCACCCCGTCGAGATTGCAGCCTCTaGCTGGCCGCCACCCCGTCT +
Preference number: 4 (lower is better)
Translates to: ALASRRAEIAASAWPPPRRDCSL*LAATPS
Trigger: AGACGGGGTGGCGGCCAGGCAGAGGCTGCAATCTCG...ACGGGGTGGCGGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGGGAGGCCAAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CCA 90 bp GCCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCTGGCCGCCACCCCGTATTGCAGCCTCTGCCTaGCCGCCACCCCGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: ALASRRAEIAASAWPPPRIAASA*PPPRLG
Trigger: TCCCAGACGGGGTGGCGGCCAGGCAGAGGCTGCAAT...ACGGGGTGGCGGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGGGAGGCCAAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp GATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCATACGGGGCGCCGTaGGCTGCCCGGCGGAGCACC +
Preference number: 4 (lower is better)
Translates to: DAEPRLDGTAAISAHCNLPYGAP*AARRST
Trigger: GGTGCTCCGCCGGGCAGCTCACGGCGCCCCGTATGG...GAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp CCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGCAGGGACACAAACACTaGGGAAGGCCAAGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PIREVRGASARPPLLGSEQGHKH*GRPRPQ
Trigger: CTGCGGCCTTGGCCTTCCGCAGTGTTTGTGTCCCTG...CTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp GCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCAGTGAGGAGCCCCTCTaGCCGGCCAGCCGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: ASASRGAGIADGVSFTQCSEEPL*PASRPV
Trigger: GACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACT...GCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp CCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGCTGGACGGTACTGCTaGCATCTCGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: PIREVRGASARPPLLGSEAGRYC*HLGSLQ
Trigger: TTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGC...CTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp GCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCGCCCTGTCTGGGATGTaGGGAGCGCCTCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ASASRGAGIADGVSFTQCALSGM*GAPLLG
Trigger: GCCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGC...GCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp GATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCACCTCCCAGCCGCCTaGCTTGGCCTCCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: DAEPRLDGTAAISAHCNLHLPAA*LGLPES
Trigger: GCTCTCCGGGAGGCCAAGGCAGGCGGCTGGGAGGTG...GAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
3UTR CAA 72 bp CTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATaGCAGGCGCGCACCGCCACGCCTGACTGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: LILLPQPAECLR*QARTATPDWFS
Trigger: CGAAAACCAGTCAGGCGTGGCGGTGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp TGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCACGATGACAATGGCGGTTGTCCCTACTGGGAAGTaGGGAGCCCCTCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: WEVCPAAHWGWATMTMAVVPTGK*GAPLPG
Trigger: GCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGAC...AACCGCCATTGTCATCGTGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp TGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCACGATGACAATGGCGGTTTGGAGTGCAGTGGCGTaGTCTCGGCTCGCTGCAACC +
Preference number: 4 (lower is better)
Translates to: WEVCPAAHWGWATMTMAVWSAVA*SRLAAT
Trigger: GGTTGCAGCGAGCCGAGATCACGCCACTGCACTCCA...AACCGCCATTGTCATCGTGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp TTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTGCCCATCTGGGTCCTGCACCCCGCCCTCTaGTCAGACCCCTCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: FGSCRSVAVALLHVPIWVLHPAL*SDPSPG
Trigger: CCCGGGAGAGGGGTCTGAGCAGAGGGCGGGGTGCAG...GACCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR CCA 90 bp CCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCACAATGGCGGTTTTGTaGAATAGAAAGGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PGHDPVWEVCPAAHWGWATMAVL*NRKAGR
Trigger: CCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGT...GGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CCA 90 bp TGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGGAGGAGCGCCTCTGCTaGGCCGCAGCCCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CRWSLVHSVLNGAQAGVQEERLC*AAALSG
Trigger: CCCAGACAGGGCTGCGGCCCAGCAGAGGCGCTCCTC...CTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp TTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTGCCCATCTGGGTCTCGGCAGAGCGGCCCCTaGGCTCCACAGCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: LAAAGQLLWLSFMCPSGSRQSGP*APQLPS
Trigger: AGATGGGAGCTGTGGAGCTCAGGGGCCGCTCTGCCG...AGACCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR TCA 90 bp TGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGACCCCGTCTGGGAAGTaGGGAGCGTCTCCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: CRWSLVHSVLNGAQAGVQTPSGK*GASPPS
Trigger: GCTGGGCGGAGACGCTCCTCACTTCCCAGACGGGGT...CTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp CCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCCCTCAGCTCTTGACTTaGAATAGAAAACCTATTCCC +
Preference number: 4 (lower is better)
Translates to: PGHDPVWEVCPAAHWGWAPQLLT*NRKPIP
Trigger: GGGAATAGGTTTTCTATTTCAAGTCAAGAGCTGAGG...GGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp GCCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCTGGCCGCCACCCCGTGAATCACAGAGTGATTaGTACAGAGATGTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ALASRRAEIAASAWPPPRESQSD*YRDVPV
Trigger: CACTGGAACATCTCTGTAGCAATCACTCTGTGATTC...ACGGGGTGGCGGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGGGAGGCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp AGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCCTCCCGGGACGACCAGTaGGCCCTTCCTGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SAVQVSPLLSYHFSLCPASRDDQ*ALPARG
Trigger: CCCCCGGGCAGGAAGGGCGCACTGGTCGTCCCGGGA...GGCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458426.5
CDS-3UTR CCA 90 bp GCCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCTGGCCGCCACCCCGTCGGATCTGGATCGTGTaGTTTGCAAAGGAAAAAGTT +
Preference number: 4 (lower is better)
Translates to: ALASRRAEIAASAWPPPRRIWIV*FAKEKV
Trigger: AACTTTTTCCTTTGCAAACCACACGATCCAGATCCG...ACGGGGTGGCGGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGGGAGGCCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CCA 90 bp AGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCCGGAGGCGGTCCCGCGTaGAGCGCGCGCTCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: SAVQVSPLLSYHFSLCPAGGGPA*SARSAF
Trigger: GAAAGCGGAGCGCGCGCTCCACGCGGGACCGCCTCC...GGCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR TCA 90 bp CCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGGAGGTAAGTTGGCTTaGACGTTTGATTTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: PIREVRGASARPPLLGSEGGKLA*TFDLRN
Trigger: ATTTCTTAAATCAAACGTTCAAGCCAACTTACCTCC...CTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp TGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCACGATGACAATGGCGGTTCAACCCTGTGCTCTCTaGAACATGTGCTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: WEVCPAAHWGWATMTMAVQPCAL*NMCCVH
Trigger: GTGGACACAGCACATGTTTCAGAGAGCACAGGGTTG...AACCGCCATTGTCATCGTGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp ACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGCCCCATCCGGGAGGTaGGGGGCGCTTCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: TLCSLKHVLCPLRVKWIKAPSGR*GALLPG
Trigger: GCCGGGCAGAAGCGCCCCTCACCTCCCGGATGGGGC...CTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp TGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGCAACCTCCCTGCCTaGTTCTCCTGCCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: CRWSLVHSVLNGAQAGVQCNLPA*FSCLSL
Trigger: CAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCA...CTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp AGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCCCGGCAGAGCGGCCCCTaGGCTCCACAGCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: SAVQVSPLLSYHFSLCPARQSGP*APQLPS
Trigger: AGATGGGAGCTGTGGAGCTCAGGGGCCGCTCTGCCG...GGCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR GCA 90 bp TTCCTCACTTCTGTTACATTTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTGAGGGCCATTCCGCCTaGACCCCGCCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: FLTSVTFWQLQVSCCGSPEGHSA*TPPSAQ
Trigger: CTGAGCAGAGGGCGGGGTGCAGGCGGAATGGCCCTC...AGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGTGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR GCA 90 bp AGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCCGAGGGCCATTCCGCCTaGACCCCGCCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SAVQVSPLLSYHFSLCPAEGHSA*TPPSAQ
Trigger: CTGAGCAGAGGGCGGGGTGCAGGCGGAATGGCCCTC...GGCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR GCA 90 bp TGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGATCCCAAACCACCGCTaGGACTCCCAGGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: CRWSLVHSVLNGAQAGVQIPNHR*DSQVSP
Trigger: TGGAGACACCTGGGAGTCGCAGCGGTGGTTTGGGAT...CTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp ACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGTGAGGGGCGCTTCTaGCCGGCCGCCCCTACTGGG +
Preference number: 4 (lower is better)
Translates to: TLCSLKHVLCPLRVKWIKGEGRF*PAAPTG
Trigger: CCCAGTAGGGGCGGCCGGGCAGAAGCGCCCCTCACC...CTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CCA 90 bp GATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCAGGCAGAAGCATTCTTaGCCCTCAAGGAGCTTACAC +
Preference number: 4 (lower is better)
Translates to: DAEPRLDGTAAISAHCNLRQKHS*PSRSLH
Trigger: GTGTAAGCTCCTTGAGGGCCAAGAATGCTTCTGCCT...GAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp ACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGCTGCACCCCGCCCTCTaGTCAGACCCCTCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: TLCSLKHVLCPLRVKWIKLHPAL*SDPSPG
Trigger: CCCGGGAGAGGGGTCTGAGCAGAGGGCGGGGTGCAG...CTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp ATAATAGGTTTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACCCATACGGGGCGCCGTaGGCTGCCCGGCGGAGCACC +
Preference number: 4 (lower is better)
Translates to: IIGFGEEFHRGIVCLSHNPYGAP*AARRST
Trigger: GGTGCTCCGCCGGGCAGCTCACGGCGCCCCGTATGG...GTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAAACCTATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458426.5
CDS-3UTR CCA 90 bp TGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGATGTGGAAAGAACGATaGCCGCATCCCAAACCACCG +
Preference number: 4 (lower is better)
Translates to: CRWSLVHSVLNGAQAGVQMWKER*PHPKPP
Trigger: CGGTGGTTTGGGATGCGGCCATCGTTCTTTCCACAT...CTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CCA 90 bp ACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGTCATCCTCCCACCTaGCCAGCTGCCCCATCCGGG +
Preference number: 4 (lower is better)
Translates to: TLCSLKHVLCPLRVKWIKGHPPT*PAAPSG
Trigger: CCCGGATGGGGCAGCTGGCCAGGTGGGAGGATGACC...CTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp TGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGGATCCTGTTGATCTGTaGCCTTATCCCCAACCCTGT +
Preference number: 4 (lower is better)
Translates to: CRWSLVHSVLNGAQAGVQDPVDL*PYPQPC
Trigger: ACAGGGTTGGGGATAAGGTCACAGATCAACAGGATC...CTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp TTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACATCACATCCGAGGGCCATTCCGCCTaGACCCCGCCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: FGEEFHRGIVCLSHNITSEGHSA*TPPSAQ
Trigger: CTGAGCAGAGGGCGGGGTGCAGGCGGAATGGCCCTC...GGATGTGATGTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR GCA 90 bp CTTACACTCTACAGGGCAATACTACCACTGAATGAGCAATTACAAGTCCAATACTCCCGGGACGACCAGTaGGCCCTTCCTGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LTLYRAILPLNEQLQVQYSRDDQ*ALPARG
Trigger: CCCCCGGGCAGGAAGGGCGCACTGGTCGTCCCGGGA...GTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp ATTTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTGCCCATCTGGGCAGCTGCAGGTCAGTTaGTGTGGCTCTCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: ILAAAGQLLWLSFMCPSGQLQVS*CGSPSC
Trigger: ACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTG...CCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR GCA 90 bp GTTACATCTACTCGTGATCTGTTAGCCACAGCACAGGCAAGGACAAGCCCAAAGATCCCAAACCACCGCTaGGACTCCCAGGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VTSTRDLLATAQARTSPKIPNHR*DSQVSP
Trigger: TGGAGACACCTGGGAGTCGCAGCGGTGGTTTGGGAT...CTTTGGGCTTGTCCTTGCCTGTGCTGTGGCTAACAGATCACGAGTAGATGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR GCA 90 bp GATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCTTTCTCACAGTAAATTaGCTCTCCAGCATTGCTAAG +
Preference number: 4 (lower is better)
Translates to: DAEPRLDGTAAISAHCNLFLTVN*LSSIAK
Trigger: CTTAGCAATGCTGGAGAGGCAATTTACTGTGAGAAA...GAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp AGCTCTTCTGTTAATTTGTGTTGCTACAGTAACAACCACGAATCTCAGTGTCTTTCCCGGGACGACCAGTaGGCCCTTCCTGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SSSVNLCCYSNNHESQCLSRDDQ*ALPARG
Trigger: CCCCCGGGCAGGAAGGGCGCACTGGTCGTCCCGGGA...AAGACACTGAGATTCGTGGTTGTTACTGTAGCAACACAAATTAACAGAAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR CCA 90 bp TTTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTGCCCATCTGGGTCCATCTCCAGGTATGTaGAAAGAACGATGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: FWQLQVSCCGSPSCAHLGPSPGM*KERWPH
Trigger: ATGCGGCCATCGTTCTTTCCACATACCTGGAGATGG...ACCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR TCA 90 bp ATAATAGGTTTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACCGGCAGAGCGGCCCCTaGGCTCCACAGCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: IIGFGEEFHRGIVCLSHNRQSGP*APQLPS
Trigger: AGATGGGAGCTGTGGAGCTCAGGGGCCGCTCTGCCG...GTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAAACCTATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR GCA 90 bp AATTATAGTCTCCTTCAGTCTGTGAAAGTTTGTTTCCTTGTCTTTGATGGCCTTCTGCACCCCGCCCTCTaGTCAGACGGCCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: NYSLLQSVKVCFLVFDGLLHPAL*SDGPGG
Trigger: GCCTCCCGGGCCGTCTGAGCAGAGGGCGGGGTGCAG...AAGGCCATCAAAGACAAGGAAACAAACTTTCACAGACTGAAGGAGACTATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425132.5
CDS-3UTR CCA 90 bp CCTCACTTCTGTTACATTTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTGGAAAGAACGATaGCCGCATCCCAAACCACCG +
Preference number: 4 (lower is better)
Translates to: PHFCYILAAAGQLLWLSFMWKER*PHPKPP
Trigger: CGGTGGTTTGGGATGCGGCCATCGTTCTTTCCACAT...GAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR CCA 90 bp TTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTGCCCATCTGGGTCACTTCTGTTACATTTTaGCAGCTGCAGGTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: FGSCRSVAVALLHVPIWVTSVTF*QLQVSC
Trigger: GCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGT...GACCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR GCA 90 bp TGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGCTGGATCGTGTGGTTTaGAAAGGAAAAAGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: CRWSLVHSVLNGAQAGVQLDRVV*KGKSCK
Trigger: CTTGCAACTTTTTCCTTTGCAAACCACACGATCCAG...CTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CCA 90 bp TTTTTATTAAGATGGGAAGATGTTCTCGGACAAAAGCAGGTTACCAAAGAGTATGGAGGCGGTCCCGCGTaGAGCGCGCGCTCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: FLLRWEDVLGQKQVTKEYGGGPA*SARSAF
Trigger: GAAAGCGGAGCGCGCGCTCCACGCGGGACCGCCTCC...ATACTCTTTGGTAACCTGCTTTTGTCCGAGAACATCTTCCCATCTTAATAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458426.5
CDS-3UTR CCA 90 bp GATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCAGAAAACAACATATTaGATATTTTCACCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: DAEPRLDGTAAISAHCNLQKTTY*IFSPLG
Trigger: TCCCAGAGGTGAAAATATCCAATATGTTGTTTTCTG...GAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp TGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGGTTCATGTGTGTGTGTaGGATGTCAAAGTGTATCAT +
Preference number: 4 (lower is better)
Translates to: CRWSLVHSVLNGAQAGVQVHVCV*DVKVYH
Trigger: ATGATACACTTTGACATCTCACACACACACATGAAC...CTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp AGTTTTAAAAATACAGAGTTCCGGATACCCTTCATCCAGCTTTCTCTAATCTTACTGCACCCCGCCCTCTaGTCAGACCCCTCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: SFKNTEFRIPFIQLSLILLHPAL*SDPSPG
Trigger: CCCGGGAGAGGGGTCTGAGCAGAGGGCGGGGTGCAG...TAAGATTAGAGAAAGCTGGATGAAGGGTATCCGGAACTCTGTATTTTTAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000458426.5
CDS-3UTR GCA 90 bp TGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTTTAATGTCATCCTATaGGTTGTTAAGGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: CRWSLVHSVLNGAQAGVQFNVIL*VVKEAG
Trigger: CCCTGCTTCCTTAACAACGCATAGGATGACATTAAA...CTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp TTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTGCCCATCTGGGTCTGAATATCCCTCAGTTTaGATTTGTCCAGTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LAAAGQLLWLSFMCPSGSEYPSV*ICPVFS
Trigger: GGAAAACACTGGACAAATGCAAACTGAGGGATATTC...AGACCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR CCA 90 bp ATTTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTGCCCATCTGGGCGGATCTGGATCGTGTaGTTTGCAAAGGAAAAAGTT +
Preference number: 4 (lower is better)
Translates to: ILAAAGQLLWLSFMCPSGRIWIV*FAKEKV
Trigger: AACTTTTTCCTTTGCAAACCACACGATCCAGATCCG...CCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR CCA 90 bp AGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCCCCATCTCCAGGTATGTaGAAAGAACGATGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: SAVQVSPLLSYHFSLCPAPSPGM*KERWPH
Trigger: ATGCGGCCATCGTTCTTTCCACATACCTGGAGATGG...GGCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR TCA 90 bp GCAATACTACCACTGAATGAGCAATTACAAGTCCAATACAAAAGGAGCTTATATCGGCAGAGCGGCCCCTaGGCTCCACAGCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: AILPLNEQLQVQYKRSLYRQSGP*APQLPS
Trigger: AGATGGGAGCTGTGGAGCTCAGGGGCCGCTCTGCCG...ATATAAGCTCCTTTTGTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp GCAATACTACCACTGAATGAGCAATTACAAGTCCAATACAAAAGGAGCTTATATGCCCCTACTGGGAAGTaGGGAGCCCCTCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: AILPLNEQLQVQYKRSLYAPTGK*GAPLPG
Trigger: GCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGC...ATATAAGCTCCTTTTGTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp GCAATACTACCACTGAATGAGCAATTACAAGTCCAATACAAAAGGAGCTTATATCCGGAGAGCCGAGATTaGAGCCTCTGCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: AILPLNEQLQVQYKRSLYPESRD*SLCLAA
Trigger: GGCGGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGG...ATATAAGCTCCTTTTGTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp TTCCTCACTTCTGTTACATTTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTTACATTTTGGCAGCTaGAGGTCAGTTGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: FLTSVTFWQLQVSCCGSPLHFGS*RSVAVA
Trigger: AGCCACAGCAACTGACCTGCAGCTGCCAAAATGTAA...AGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGTGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR GCA 90 bp ACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGAGAAATCGGATGGTTaGCGGGTCTGTGTGGATAGA +
Preference number: 4 (lower is better)
Translates to: TLCSLKHVLCPLRVKWIKEKSDG*RVCVDR
Trigger: TCTATCCACACAGACCCGGCAACCATCCGATTTCTC...CTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp AGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCCATCACTTGGTTAAAGTaGTGTCCAGGTGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: SAVQVSPLLSYHFSLCPAITWLK*CPGVST
Trigger: AGTGGAGACACCTGGACAGCACTTTAACCAAGTGAT...GGCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR GCA 90 bp TTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTGCCCATCTGGGTCTCTGTTAATTTGTGTTaGTACAGTAACAACCACGAA +
Preference number: 4 (lower is better)
Translates to: FGSCRSVAVALLHVPIWVSVNLC*YSNNHE
Trigger: TTCGTGGTTGTTACTGTAGCAACACAAATTAACAGA...GACCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR CCA 90 bp TTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACATCACATCCATGTGGAAAGAACGATaGCCGCATCCCAAACCACCG +
Preference number: 4 (lower is better)
Translates to: FGEEFHRGIVCLSHNITSMWKER*PHPKPP
Trigger: CGGTGGTTTGGGATGCGGCCATCGTTCTTTCCACAT...GGATGTGATGTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR TCA 90 bp GCAATACTACCACTGAATGAGCAATTACAAGTCCAATACAAAAGGAGCTTATATTCCACGGTCTCCCTCTaGTGCCGAGCCAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: AILPLNEQLQVQYKRSLYSTVSL*CRAKAG
Trigger: TCCAGCCTTGGCTCGGCATCAGAGGGAGACCGTGGA...ATATAAGCTCCTTTTGTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp ACTTCTGTTACATTTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTAGAGCAGCACGTCTTTaGGAAAAGGGCAATGCTTTT +
Preference number: 4 (lower is better)
Translates to: TSVTFWQLQVSCCGSPSCRAARL*EKGNAF
Trigger: AAAAGCATTGCCCTTTTCTCAAAGACGTGCTGCTCT...ACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR GCA 90 bp AGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCCCTGGATCGTGTGGTTTaGAAAGGAAAAAGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: SAVQVSPLLSYHFSLCPALDRVV*KGKSCK
Trigger: CTTGCAACTTTTTCCTTTGCAAACCACACGATCCAG...GGCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR TCA 90 bp CTTACACTCTACAGGGCAATACTACCACTGAATGAGCAATTACAAGTCCAATACGCCTTGGGATCCTGTTaGTCTGTGACCTTATCCCCA +
Preference number: 4 (lower is better)
Translates to: LTLYRAILPLNEQLQVQYALGSC*SVTLSP
Trigger: TGGGGATAAGGTCACAGATCAACAGGATCCCAAGGC...GTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR TCA 90 bp AAGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCGTCTCCTTCAGTCTGTaGAAGTTTGTTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: KCCPGVSTVELPFFSLSSVSFSL*KFVSLS
Trigger: AGACAAGGAAACAAACTTTCACAGACTGAAGGAGAC...GCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR GCA 90 bp AATTATAGTCTCCTTCAGTCTGTGAAAGTTTGTTTCCTTGTCTTTGATGGCCTTATCCCAAACCACCGCTaGGACTCCCAGGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: NYSLLQSVKVCFLVFDGLIPNHR*DSQVSP
Trigger: TGGAGACACCTGGGAGTCGCAGCGGTGGTTTGGGAT...AAGGCCATCAAAGACAAGGAAACAAACTTTCACAGACTGAAGGAGACTATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CCA 90 bp AAGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCCGGATCTGGATCGTGTaGTTTGCAAAGGAAAAAGTT +
Preference number: 4 (lower is better)
Translates to: KCCPGVSTVELPFFSLSSRIWIV*FAKEKV
Trigger: AACTTTTTCCTTTGCAAACCACACGATCCAGATCCG...GCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CCA 90 bp CTTACACTCTACAGGGCAATACTACCACTGAATGAGCAATTACAAGTCCAATACCAGTCCTGCCGGATCTaGATCGTGTGGTTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LTLYRAILPLNEQLQVQYQSCRI*IVWFAK
Trigger: CTTTGCAAACCACACGATCCAGATCCGGCAGGACTG...GTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CCA 90 bp ATAATAGGTTTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACATGTGGAAAGAACGATaGCCGCATCCCAAACCACCG +
Preference number: 4 (lower is better)
Translates to: IIGFGEEFHRGIVCLSHNMWKER*PHPKPP
Trigger: CGGTGGTTTGGGATGCGGCCATCGTTCTTTCCACAT...GTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAAACCTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR GCA 90 bp AGTTTTAAAAATACAGAGTTCCGGATACCCTTCATCCAGCTTTCTCTAATCTTAATCCCAAACCACCGCTaGGACTCCCAGGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SFKNTEFRIPFIQLSLILIPNHR*DSQVSP
Trigger: TGGAGACACCTGGGAGTCGCAGCGGTGGTTTGGGAT...TAAGATTAGAGAAAGCTGGATGAAGGGTATCCGGAACTCTGTATTTTTAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458426.5
CDS-3UTR GCA 90 bp TTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACATCACATCCATCACTTGGTTAAAGTaGTGTCCAGGTGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: FGEEFHRGIVCLSHNITSITWLK*CPGVST
Trigger: AGTGGAGACACCTGGACAGCACTTTAACCAAGTGAT...GGATGTGATGTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR GCA 90 bp AAGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCCACAGAGGTATAGTGTaGCTTTCTCATAACATCACA +
Preference number: 4 (lower is better)
Translates to: KCCPGVSTVELPFFSLSSHRGIV*LSHNIT
Trigger: TGTGATGTTATGAGAAAGGCACACTATACCTCTGTG...GCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CCA 90 bp CTTACACTCTACAGGGCAATACTACCACTGAATGAGCAATTACAAGTCCAATACCCATCTCCAGGTATGTaGAAAGAACGATGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: LTLYRAILPLNEQLQVQYPSPGM*KERWPH
Trigger: ATGCGGCCATCGTTCTTTCCACATACCTGGAGATGG...GTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CCA 90 bp AGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCCTTAACTTTGATCACTTaGTTAAAGTGCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SAVQVSPLLSYHFSLCPALTLIT*LKCCPG
Trigger: ACCTGGACAGCACTTTAACCAAGTGATCAAAGTTAA...GGCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR TCA 90 bp AAATTTCTTCCTCACTTCTGTTACATTTTGGCAGCTGCAGGTCAGTTGCTGTGGGTCTCCTTCAGTCTGTaGAAGTTTGTTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: KFLPHFCYILAAAGQLLWVSFSL*KFVSLS
Trigger: AGACAAGGAAACAAACTTTCACAGACTGAAGGAGAC...CCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGTGAGGAAGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR TCA 90 bp TTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACATCACATCCGTCTCCTTCAGTCTGTaGAAGTTTGTTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: FGEEFHRGIVCLSHNITSVSFSL*KFVSLS
Trigger: AGACAAGGAAACAAACTTTCACAGACTGAAGGAGAC...GGATGTGATGTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR GCA 90 bp CTTACACTCTACAGGGCAATACTACCACTGAATGAGCAATTACAAGTCCAATACGGCTTGTGGAATTTCTaGAACCCAAATTCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: LTLYRAILPLNEQLQVQYGLWNF*NPNSVV
Trigger: GACCACGGAATTTGGGTTGCAGAAATTCCACAAGCC...GTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp AAATTTCTTCCTCACTTCTGTTACATTTTGGCAGCTGCAGGTCAGTTGCTGTGGCTGGATCGTGTGGTTTaGAAAGGAAAAAGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: KFLPHFCYILAAAGQLLWLDRVV*KGKSCK
Trigger: CTTGCAACTTTTTCCTTTGCAAACCACACGATCCAG...CCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGTGAGGAAGAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR GCA 90 bp TTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACATCACATCCCTGGATCGTGTGGTTTaGAAAGGAAAAAGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: FGEEFHRGIVCLSHNITSLDRVV*KGKSCK
Trigger: CTTGCAACTTTTTCCTTTGCAAACCACACGATCCAG...GGATGTGATGTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR GCA 90 bp AAGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCGAATATCCCTCAGTTTaGATTTGTCCAGTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KCCPGVSTVELPFFSLSSEYPSV*ICPVFS
Trigger: AGAAAACACTGGACAAATGCAAACTGAGGGATATTC...GCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CCA 90 bp CTTACACTCTACAGGGCAATACTACCACTGAATGAGCAATTACAAGTCCAATACCTGGGGAAGCAACAATaGAAGAGGCAGAAGCATTCT +
Preference number: 4 (lower is better)
Translates to: LTLYRAILPLNEQLQVQYLGKQQ*KRQKHS
Trigger: AGAATGCTTCTGCCTCTTCCATTGTTGCTTCCCCAG...GTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp ACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGAGCTTGGGAAAGAACTaGATTAAGACATTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: TLCSLKHVLCPLRVKWIKSLGKN*IKTFEQ
Trigger: TTGCTCAAATGTCTTAATGCAGTTCTTTCCCAAGCT...CTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR GCA 90 bp GGACAAGCCCAAAGTCAGTGGAGTGGGAATGAACTCTTCATAATCCAGTTTGGGGCTTTTGAAAGCATTTaGTTGATTTTGGTGAACGTT +
Preference number: 4 (lower is better)
Translates to: GQAQSQWSGNELFIIQFGAFESI*LILVNV
Trigger: AACGTTCACCAAAATCAAGCAAATGCTTTCAAAAGC...CCCAAACTGGATTATGAAGAGTTCATTCCCACTCCACTGACTTTGGGCTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR CCA 90 bp AATTATAGTCTCCTTCAGTCTGTGAAAGTTTGTTTCCTTGTCTTTGATGGCCTTCCATCTCCAGGTATGTaGAAAGAACGATGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: NYSLLQSVKVCFLVFDGLPSPGM*KERWPH
Trigger: ATGCGGCCATCGTTCTTTCCACATACCTGGAGATGG...AAGGCCATCAAAGACAAGGAAACAAACTTTCACAGACTGAAGGAGACTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CCA 90 bp AGCTCTTCTGTTAATTTGTGTTGCTACAGTAACAACCACGAATCTCAGTGTCTTCAAGCCCAAAGTCAGTaGAGTGGGAATGAACTCTTC +
Preference number: 4 (lower is better)
Translates to: SSSVNLCCYSNNHESQCLQAQSQ*SGNELF
Trigger: GAAGAGTTCATTCCCACTCCACTGACTTTGGGCTTG...AAGACACTGAGATTCGTGGTTGTTACTGTAGCAACACAAATTAACAGAAGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR TCA 90 bp TGTTGCTACAGTAACAACCACGAATCTCAGTGTCTTAAAATTTCTTCCTCACTTCGTTACATCTACTCGTaGTCTGTTAGCCACAGCACA +
Preference number: 4 (lower is better)
Translates to: CCYSNNHESQCLKISSSLRYIYS*SVSHST
Trigger: TGTGCTGTGGCTAACAGATCACGAGTAGATGTAACG...AAGTGAGGAAGAAATTTTAAGACACTGAGATTCGTGGTTGTTACTGTAGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR GCA 90 bp GCAATACTACCACTGAATGAGCAATTACAAGTCCAATACAAAAGGAGCTTATATTGCCAAATCCCCCTCTaGGAGAAACACCCAAGAATG +
Preference number: 4 (lower is better)
Translates to: AILPLNEQLQVQYKRSLYCQIPL*EKHPRM
Trigger: CATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCA...ATATAAGCTCCTTTTGTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CCA 90 bp GCAATACTACCACTGAATGAGCAATTACAAGTCCAATACAAAAGGAGCTTATATTCTTGTCCCCCAGGCTaGAGTACAATGGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: AILPLNEQLQVQYKRSLYSCPPG*STMVQS
Trigger: AGATTGCACCATTGTACTCCAGCCTGGGGGACAAGA...ATATAAGCTCCTTTTGTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CCA 90 bp TTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACATCACATCCTTAACTTTGATCACTTaGTTAAAGTGCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: FGEEFHRGIVCLSHNITSLTLIT*LKCCPG
Trigger: ACCTGGACAGCACTTTAACCAAGTGATCAAAGTTAA...GGATGTGATGTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR GCA 90 bp ATAATAGGTTTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACCACAGAGGTATAGTGTaGCTTTCTCATAACATCACA +
Preference number: 4 (lower is better)
Translates to: IIGFGEEFHRGIVCLSHNHRGIV*LSHNIT
Trigger: TGTGATGTTATGAGAAAGGCACACTATACCTCTGTG...GTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAAACCTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR TCA 90 bp AATTATAGTCTCCTTCAGTCTGTGAAAGTTTGTTTCCTTGTCTTTGATGGCCTTAGGTGTCTCCACTGTTaGGCTACCATTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: NYSLLQSVKVCFLVFDGLRCLHC*ATIFLF
Trigger: AAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCT...AAGGCCATCAAAGACAAGGAAACAAACTTTCACAGACTGAAGGAGACTATAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR GCA 90 bp ATAATAGGTTTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACGAATATCCCTCAGTTTaGATTTGTCCAGTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: IIGFGEEFHRGIVCLSHNEYPSV*ICPVFS
Trigger: AGAAAACACTGGACAAATGCAAACTGAGGGATATTC...GTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAAACCTATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CCA 90 bp AATTATAGTCTCCTTCAGTCTGTGAAAGTTTGTTTCCTTGTCTTTGATGGCCTTCGGATCTGGATCGTGTaGTTTGCAAAGGAAAAAGTT +
Preference number: 4 (lower is better)
Translates to: NYSLLQSVKVCFLVFDGLRIWIV*FAKEKV
Trigger: AACTTTTTCCTTTGCAAACCACACGATCCAGATCCG...AAGGCCATCAAAGACAAGGAAACAAACTTTCACAGACTGAAGGAGACTATAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR TCA 90 bp AGTTTTAAAAATACAGAGTTCCGGATACCCTTCATCCAGCTTTCTCTAATCTTAAGGTGTCTCCACTGTTaGGCTACCATTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SFKNTEFRIPFIQLSLILRCLHC*ATIFLF
Trigger: AAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCT...TAAGATTAGAGAAAGCTGGATGAAGGGTATCCGGAACTCTGTATTTTTAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458426.5
3UTR CAA 72 bp ATTCTAAAAGAAAGTGTAGACAGCTCTTCTGTTAATTaGTGTTGCTACAGTAACAACCACGAATCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: ILKESVDSSSVN*CCYSNNHESQC
Trigger: ACACTGAGATTCGTGGTTGTTACTGTAGCAACACAAATTAACAGAAGAGCTGTCTACACTTTCTTTTAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR CAA 90 bp GCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCCCCGGAGAGCCGAGATaGCAGCCTCTGCCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: ASASRGAGIADGVSFTQCPGEPR*QPLPGR
Trigger: GCGGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGGG...GCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CAA 90 bp CCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCGAGGCAGAAGCATTCTaGGCCCTCAAGGAGCTTACA +
Preference number: 5 (lower is better)
Translates to: PGHDPVWEVCPAAHWGWAEAEAF*ALKELT
Trigger: TGTAAGCTCCTTGAGGGCCAAGAATGCTTCTGCCTC...GGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CAA 90 bp GATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCGTGCCCAGCGGCTCATaGGGGATGGGCCACGATGAC +
Preference number: 5 (lower is better)
Translates to: DAEPRLDGTAAISAHCNLVPSGS*GMGHDD
Trigger: GTCATCGTGGCCCATCCCCAATGAGCCGCTGGGCAC...GAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS CCA 90 bp CGCTCCGAAGAAGGCATGGTCACTCTAGTCCCCGCGTCTCCACGGTaGGGTCAGAAGCGGCGTAATAGCCCGCTTGGCGGCAATCGAGTG +
Preference number: 5 (lower is better)
Translates to: RSEEGMVTLVPASPR*GQKRRNSPLGGNRV
Trigger: CACTCGATTGCCGCCAAGCGGGCTATTACGCCGCTTCTGACCCCACCGTGGAGACGCGGGGACTAGAGTGACCATGCCTTCTTCGGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442521.1
ENST00000461419.6
CDS-3UTR CAA 90 bp GCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCATGTCATCCTATGCGTaGTTAAGGAAGCAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: ASASRGAGIADGVSFTQCMSSYA*LRKQGK
Trigger: CTTTCCCTGCTTCCTTAACAACGCATAGGATGACAT...GCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CAA 90 bp GCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCTCTGGATCGTGTGGTTaGCAAAGGAAAAAGTTGCAA +
Preference number: 5 (lower is better)
Translates to: ASASRGAGIADGVSFTQCSGSCG*QRKKLQ
Trigger: TTGCAACTTTTTCCTTTGCAAACCACACGATCCAGA...GCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CAA 90 bp ATTTCTTCCTCACTTCTGTTACATTTTGGCAGCTGCAGGTCAGTTGCTGTGGCTGCAGCTGCAGGTCAGTaGCTGTGGCTCTCCTTCATG +
Preference number: 5 (lower is better)
Translates to: ISSSLLLHFGSCRSVAVAAAAGQ*LWLSFM
Trigger: CATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGC...AGCCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGTGAGGAAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR CAA 90 bp TGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTTGCAAAGGAAAAAGTaGCAAGAGGCTTGTGGAATT +
Preference number: 5 (lower is better)
Translates to: CRWSLVHSVLNGAQAGVQLQRKK*QEACGI
Trigger: AATTCCACAAGCCTCTTGCAACTTTTTCCTTTGCAA...CTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CAA 90 bp ATTTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTGCCCATCTGGGTTGCAAAGGAAAAAGTaGCAAGAGGCTTGTGGAATT +
Preference number: 5 (lower is better)
Translates to: ILAAAGQLLWLSFMCPSGLQRKK*QEACGI
Trigger: AATTCCACAAGCCTCTTGCAACTTTTTCCTTTGCAA...CCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR CAA 90 bp TTTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCATGTGCCCATCTGGGTAGAATATCCCTCAGTTaGCATTTGTCCAGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: FWQLQVSCCGSPSCAHLGRISLS*HLSSVF
Trigger: GAAAACACTGGACAAATGCAAACTGAGGGATATTCT...ACCCAGATGGGCACATGAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR CAA 90 bp AGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCCTTGCAAAGGAAAAAGTaGCAAGAGGCTTGTGGAATT +
Preference number: 5 (lower is better)
Translates to: SAVQVSPLLSYHFSLCPALQRKK*QEACGI
Trigger: AATTCCACAAGCCTCTTGCAACTTTTTCCTTTGCAA...GGCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CAA 90 bp CTTACACTCTACAGGGCAATACTACCACTGAATGAGCAATTACAAGTCCAATACTGCCTTGGGATCCTGTaGATCTGTGACCTTATCCCC +
Preference number: 5 (lower is better)
Translates to: LTLYRAILPLNEQLQVQYCLGIL*ICDLIP
Trigger: GGGGATAAGGTCACAGATCAACAGGATCCCAAGGCA...GTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CAA 90 bp AAGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCCTACCATTTTTCTCTTaGTCCAGCCCATATTCAAGG +
Preference number: 5 (lower is better)
Translates to: KCCPGVSTVELPFFSLSSLPFFS*SSPYSR
Trigger: CCTTGAATATGGGCTGGACAAAGAGAAAAATGGTAG...GCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CAA 90 bp CCTCACTTCTGTTACATTTTGGCAGCTGCAGGTCAGTTGCTGTGGCTCTCCTTCAGCATTTGCTTGATTTaGGTGAACGTTACATCTACT +
Preference number: 5 (lower is better)
Translates to: PHFCYILAAAGQLLWLSFSICLI*VNVTST
Trigger: AGTAGATGTAACGTTCACCAAAATCAAGCAAATGCT...GAAGGAGAGCCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR CAA 90 bp AAATTTCTTCCTCACTTCTGTTACATTTTGGCAGCTGCAGGTCAGTTGCTGTGGCACTTCTGTTACATTTaGGCAGCTGCAGGTCAGTTG +
Preference number: 5 (lower is better)
Translates to: KFLPHFCYILAAAGQLLWHFCYI*AAAGQL
Trigger: CAACTGACCTGCAGCTGCCAAAATGTAACAGAAGTG...CCACAGCAACTGACCTGCAGCTGCCAAAATGTAACAGAAGTGAGGAAGAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432416.5
CDS-3UTR CAA 90 bp AGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCCTTGGCGATATTAACTTaGATCACTTGGTTAAAGTGC +
Preference number: 5 (lower is better)
Translates to: SAVQVSPLLSYHFSLCPALAILT*ITWLKC
Trigger: GCACTTTAACCAAGTGATCAAAGTTAATATCGCCAA...GGCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CAA 90 bp AAGTGCTGTCCAGGTGTCTCCACTGTTGAGCTACCATTTTTCTCTTTGTCCAGCAGAATATCCCTCAGTTaGCATTTGTCCAGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: KCCPGVSTVELPFFSLSSRISLS*HLSSVF
Trigger: GAAAACACTGGACAAATGCAAACTGAGGGATATTCT...GCTGGACAAAGAGAAAAATGGTAGCTCAACAGTGGAGACACCTGGACAGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CAA 90 bp TTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACATCACATCCCTACCATTTTTCTCTTaGTCCAGCCCATATTCAAGG +
Preference number: 5 (lower is better)
Translates to: FGEEFHRGIVCLSHNITSLPFFS*SSPYSR
Trigger: CCTTGAATATGGGCTGGACAAAGAGAAAAATGGTAG...GGATGTGATGTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CAA 90 bp TTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACATCACATCCTCCCTCAGTTTGCATTaGTCCAGTGTTTTCTATGGA +
Preference number: 5 (lower is better)
Translates to: FGEEFHRGIVCLSHNITSSLSLH*SSVFYG
Trigger: TCCATAGAAAACACTGGACAAATGCAAACTGAGGGA...GGATGTGATGTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CAA 90 bp CTTACACTCTACAGGGCAATACTACCACTGAATGAGCAATTACAAGTCCAATACATTGCCTCTCCAGCATaGCTAAGAAGTTGTTATCCC +
Preference number: 5 (lower is better)
Translates to: LTLYRAILPLNEQLQVQYIASPA*LRSCYP
Trigger: GGGATAACAACTTCTTAGCAATGCTGGAGAGGCAAT...GTATTGGACTTGTAATTGCTCATTCAGTGGTAGTATTGCCCTGTAGAGTGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411432.5
CDS-3UTR CAA 90 bp TTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACATCACATCCATTAACTTTGATCACTaGGTTAAAGTGCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: FGEEFHRGIVCLSHNITSINFDH*VKVLSR
Trigger: CCTGGACAGCACTTTAACCAAGTGATCAAAGTTAAT...GGATGTGATGTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CAA 90 bp TTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACATCACATCCAGAATATCCCTCAGTTaGCATTTGTCCAGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: FGEEFHRGIVCLSHNITSRISLS*HLSSVF
Trigger: GAAAACACTGGACAAATGCAAACTGAGGGATATTCT...GGATGTGATGTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CAA 90 bp ATAATAGGTTTTGGGGAGGAATTCCACAGAGGTATAGTGTGCCTTTCTCATAACTTGCAAAGGAAAAAGTaGCAAGAGGCTTGTGGAATT +
Preference number: 5 (lower is better)
Translates to: IIGFGEEFHRGIVCLSHNLQRKK*QEACGI
Trigger: AATTCCACAAGCCTCTTGCAACTTTTTCCTTTGCAA...GTTATGAGAAAGGCACACTATACCTCTGTGGAATTCCTCCCCAAAACCTATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CAA 90 bp AATTATAGTCTCCTTCAGTCTGTGAAAGTTTGTTTCCTTGTCTTTGATGGCCTTTCCCTCAGTTTGCATTaGTCCAGTGTTTTCTATGGA +
Preference number: 5 (lower is better)
Translates to: NYSLLQSVKVCFLVFDGLSLSLH*SSVFYG
Trigger: TCCATAGAAAACACTGGACAAATGCAAACTGAGGGA...AAGGCCATCAAAGACAAGGAAACAAACTTTCACAGACTGAAGGAGACTATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425132.5
ENST00000458426.5
CDS-3UTR CAA 90 bp TTTTTATTAAGATGGGAAGATGTTCTCGGACAAAAGCAGGTTACCAAAGAGTATATTAACTTTGATCACTaGGTTAAAGTGCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: FLLRWEDVLGQKQVTKEYINFDH*VKVLSR
Trigger: CCTGGACAGCACTTTAACCAAGTGATCAAAGTTAAT...ATACTCTTTGGTAACCTGCTTTTGTCCGAGAACATCTTCCCATCTTAATAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458426.5
CDS-3UTR CAA 90 bp TTTTTATTAAGATGGGAAGATGTTCTCGGACAAAAGCAGGTTACCAAAGAGTATTTGGCGATATTAACTTaGATCACTTGGTTAAAGTGC +
Preference number: 5 (lower is better)
Translates to: FLLRWEDVLGQKQVTKEYLAILT*ITWLKC
Trigger: GCACTTTAACCAAGTGATCAAAGTTAATATCGCCAA...ATACTCTTTGGTAACCTGCTTTTGTCCGAGAACATCTTCCCATCTTAATAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458426.5
CDS GCA 72 bp GGCCATTCCGCCTGCACCCCGCCCTCTGCTCAGACCTaGCGTGCAAAAGAATCCTGGGTGACGCTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: GHSACTPPSAQT*RAKESWVTLWP
Trigger: TGGCCAGAGCGTCACCCAGGATTCTTTTGCACGGCAGGTCTGAGCAGAGGGCGGGGTGCAGGCGGAATGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272839.7
ENST00000426075.5
CDS GCA 72 bp AGGGCACGAGGGCCATTCCGCCTGCACCCCGCCCTCTaGTCAGACCTGCCGTGCAAAAGAATCCTGGGTGAC +
Preference number: 6 (lower is better)
Translates to: RARGPFRLHPAL*SDLPCKRILGD
Trigger: GTCACCCAGGATTCTTTTGCACGGCAGGTCTGAGCAGAGGGCGGGGTGCAGGCGGAATGGCCCTCGTGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272839.7
ENST00000426075.5
CDS CCA 72 bp GAAGGCATGGTCACTCTAGTCCCCGCGTCTCCACGGTaGGGTCAGAAGCGGCGTAATAGCCCGCTTGGCGGC +
Preference number: 6 (lower is better)
Translates to: EGMVTLVPASPR*GQKRRNSPLGG
Trigger: GCCGCCAAGCGGGCTATTACGCCGCTTCTGACCCCACCGTGGAGACGCGGGGACTAGAGTGACCATGCCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442521.1
ENST00000461419.6
CDS CCA 72 bp GCTGCGACTCCCAGGTGTCTCCAGTCCTGCCGGATCTaGATCGTGTGGTTTGCAAAGGAAAAAGTTGCAAGA +
Preference number: 6 (lower is better)
Translates to: AATPRCLQSCRI*IVWFAKEKVAR
Trigger: TCTTGCAACTTTTTCCTTTGCAAACCACACGATCCAGATCCGGCAGGACTGGAGACACCTGGGAGTCGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000272839.7
ENST00000406927.6
ENST00000411432.5
ENST00000425132.5
ENST00000426075.5
ENST00000432416.5
ENST00000442521.1
ENST00000448007.6
ENST00000448823.2
ENST00000458426.5
ENST00000461419.6
ENST00000471128.1
CDS CCA 72 bp CCGCCCTCTGCTCAGACCTGCCGTGCAAAAGAATCCTaGGTGACGCTCTGGCCAAAAGATACATTATCTGTT +
Preference number: 6 (lower is better)
Translates to: PPSAQTCRAKES*VTLWPKDTLSV
Trigger: AACAGATAATGTATCTTTTGGCCAGAGCGTCACCCAGGATTCTTTTGCACGGCAGGTCTGAGCAGAGGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272839.7
ENST00000426075.5
CDS CAA 72 bp GGGACAGAACCTGCCCTTAGACTGGGTGTTAGCGGTTaGATAAACCAGAAATACATGGTCGCCGCAGTTCCG +
Preference number: 6 (lower is better)
Translates to: GTEPALRLGVSG*INQKYMVAAVP
Trigger: CGGAACTGCGGCGACCATGTATTTCTGGTTTATCAAACCGCTAACACCCAGTCTAAGGGCAGGTTCTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448007.6
CDS CAA 90 bp GATAACAATGGGACAGAACCTGCCCTTAGACTGGGTGTTAGCGGTTaGATAAACCAGAAATACATGGTCGCCGCAGTTCCGTCTCCCCGA +
Preference number: 6 (lower is better)
Translates to: DNNGTEPALRLGVSG*INQKYMVAAVPSPR
Trigger: TCGGGGAGACGGAACTGCGGCGACCATGTATTTCTGGTTTATCAAACCGCTAACACCCAGTCTAAGGGCAGGTTCTGTCCCATTGTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448007.6
CDS TCA 72 bp CCTCTGCTCAGACCTGCCGTGCAAAAGAATCCTGGGTaGCGCTCTGGCCAAAAGATACATTATCTGTTCTTA +
Preference number: 6 (lower is better)
Translates to: PLLRPAVQKNPG*RSGQKIHYLFL
Trigger: TAAGAACAGATAATGTATCTTTTGGCCAGAGCGTCACCCAGGATTCTTTTGCACGGCAGGTCTGAGCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272839.7
ENST00000426075.5