Pregenerated sensors for METTL18 (Homo sapiens)

Ensembl gene IDs: ENSG00000171806

Ensembl transcript IDs: ENST00000303469.6, ENST00000310392.5, ENST00000454472.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GCTCTGGGGATGCTTGCTTCCCGACGTGTCCTGGGATCGCGCTTCTaGAAAAGCTCACCTCACAACGCCTCCTCCGGACCTAAATCGCGC	+
Preference number: 5 (lower is better) Translates to: ALGMLASRRVLGSRF*KSSPHNASSGPKSR Trigger: GCGCGATTTAGGTCCGGAGGAGGCGTTGTGAGGTGAGCTTTTTCAGAAGCGCGATCCCAGGACACGTCGGGAAGCAAGCATCCCCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310392.5
CDS CCA 90 bp	CCTCTTTCCAAGCAGCTCTGGGGATGCTTGCTTCCCGACGTGTCCTaGGATCGCGCTTCTGAAAAAGCTCACCTCACAACGCCTCCTCCG	+
Preference number: 5 (lower is better) Translates to: PLSKQLWGCLLPDVS*DRASEKAHLTTPPP Trigger: CGGAGGAGGCGTTGTGAGGTGAGCTTTTTCAGAAGCGCGATCCCAGGACACGTCGGGAAGCAAGCATCCCCAGAGCTGCTTGGAAAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310392.5
CDS TCA 90 bp	CCATACTGTTATAATCTTGAAAGTGAATTTCTTTGGACCCTCCCTTaGATGCAGTTATACCTAGTAAACCTGATCCACAACCAAGATCCA	+
Preference number: 5 (lower is better) Translates to: PYCYNLESEFLWTLP*MQLYLVNLIHNQDP Trigger: TGGATCTTGGTTGTGGATCAGGTTTACTAGGTATAACTGCATTCAAGGGAGGGTCCAAAGAAATTCACTTTCAAGATTATAACAGTATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303469.6 ENST00000310392.5
CDS TCA 72 bp	ATGCTTGCTTCCCGACGTGTCCTGGGATCGCGCTTCTaGAAAAGCTCACCTCACAACGCCTCCTCCGGACCT	+
Preference number: 6 (lower is better) Translates to: MLASRRVLGSRF*KSSPHNASSGP Trigger: AGGTCCGGAGGAGGCGTTGTGAGGTGAGCTTTTTCAGAAGCGCGATCCCAGGACACGTCGGGAAGCAAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310392.5
CDS CCA 72 bp	AAGCAGCTCTGGGGATGCTTGCTTCCCGACGTGTCCTaGGATCGCGCTTCTGAAAAAGCTCACCTCACAACG	+
Preference number: 6 (lower is better) Translates to: KQLWGCLLPDVS*DRASEKAHLTT Trigger: CGTTGTGAGGTGAGCTTTTTCAGAAGCGCGATCCCAGGACACGTCGGGAAGCAAGCATCCCCAGAGCTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310392.5
CDS CAA 90 bp	TTATTTTCTAACATCTTCTTTAAATCTTTAGGCATAGCATGCTCTTaGGCAGCTCTCAAGGAGGGCTGTTTTCCATGTGGCTCCAAGTTC	+
Preference number: 6 (lower is better) Translates to: LFSNIFFKSLGIACS*AALKEGCFPCGSKF Trigger: GAACTTGGAGCCACATGGAAAACAGCCCTCCTTGAGAGCTGCCAAAGAGCATGCTATGCCTAAAGATTTAAAGAAGATGTTAGAAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000303469.6 ENST00000310392.5 ENST00000454472.1
CDS TCA 72 bp	TATAATCTTGAAAGTGAATTTCTTTGGACCCTCCCTTaGATGCAGTTATACCTAGTAAACCTGATCCACAAC	+
Preference number: 6 (lower is better) Translates to: YNLESEFLWTLP*MQLYLVNLIHN Trigger: GTTGTGGATCAGGTTTACTAGGTATAACTGCATTCAAGGGAGGGTCCAAAGAAATTCACTTTCAAGATTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303469.6 ENST00000310392.5

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu