RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METTL14 (Homo sapiens)

Ensembl gene IDs: ENSG00000145388

Ensembl transcript IDs: ENST00000388822.10, ENST00000506780.2, ENST00000508801.1, ENST00000626212.2, ENST00000628452.2

Found 328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTCTCAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTaGTTGATTCTCACTTCCCAGGTTGACACCTTGACCTCTCACACT +
Preference number: 1 (lower is better)
Translates to: PSQLWICELVAMPHS*LILTSQVDTLTSHT
Trigger: AGTGTGAGAGGTCAAGGTGTCAACCTGGGAAGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTGAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR GCA 90 bp GTTCAATGTCTTCAACAATTATCGAGGTGGAAAGCCACCTCTGTGTaGTCCTCCACGGCCCCCTCTAAAGCCACCTCTTTCTCCTCGGAA +
Preference number: 1 (lower is better)
Translates to: VQCLQQLSRWKATSV*SSTAPSKATSFSSE
Trigger: TTCCGAGGAGAAAGAGGTGGCTTTAGAGGGGGCCGTGGAGGAGCACACAGAGGTGGCTTTCCACCTCGATAATTGTTGAAGACATTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
3UTR CCA 90 bp AGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTaGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTC +
Preference number: 1 (lower is better)
Translates to: RVTEQNCCSSDPSQL*ICELVAMPHSCLIL
Trigger: GAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR GCA 90 bp CATAAAGTGGCTCTACTACTTACCAGAGTAACAGAGCAGAACTGCTaGAGTAGTGATCCCTCTCAACTCTGGATCTGTGAGTTGGTTGCC +
Preference number: 1 (lower is better)
Translates to: HKVALLLTRVTEQNC*SSDPSQLWICELVA
Trigger: GGCAACCAACTCACAGATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGTAAGTAGTAGAGCCACTTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR GCA 90 bp GCTCATAAAGTGGCTCTACTACTTACCAGAGTAACAGAGCAGAACTaGTGCAGTAGTGATCCCTCTCAACTCTGGATCTGTGAGTTGGTT +
Preference number: 1 (lower is better)
Translates to: AHKVALLLTRVTEQN*CSSDPSQLWICELV
Trigger: AACCAACTCACAGATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGTAAGTAGTAGAGCCACTTTATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR GCA 90 bp AGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTaGTCTGCTTTTCTTAGAAAGGAGTTGAGAGAACTCATCAAAGTG +
Preference number: 1 (lower is better)
Translates to: RPRVSGHLLTHSMLL*SAFLRKELRELIKV
Trigger: CACTTTGATGAGTTCTCTCAACTCCTTTCTAAGAAAAGCAGAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR TCA 90 bp AGGTCAATCCAAGTTCAAGTCCACACCACAGTGCTATCTAGCACATaGATATTTGTCCTCCTTTGCTTCTTAGGAAGCGTGATTAGGAGT +
Preference number: 1 (lower is better)
Translates to: RSIQVQVHTTVLSST*IFVLLCFLGSVIRS
Trigger: ACTCCTAATCACGCTTCCTAAGAAGCAAAGGAGGACAAATATTCATGTGCTAGATAGCACTGTGGTGTGGACTTGAACTTGGATTGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR TCA 90 bp GCCTCTATTACCCAACATCAAAGAGAGGATAATGCTAGTCACACATaGACCCTAAGATTACAGGATTGTTCTAAGAAAGACCTTCTGCAT +
Preference number: 1 (lower is better)
Translates to: ASITQHQREDNASHT*TLRLQDCSKKDLLH
Trigger: ATGCAGAAGGTCTTTCTTAGAACAATCCTGTAATCTTAGGGTTCATGTGTGACTAGCATTATCCTCTCTTTGATGTTGGGTAATAGAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR TCA 90 bp AGAAGAGGTCAGAGTAATGAAATTTCATTGGAAACCTTTCCTCAATaGATACACAGTCATTGCAAAAACAACACCTCAACCTTTACTGAA +
Preference number: 1 (lower is better)
Translates to: RRGQSNEISLETFPQ*IHSHCKNNTSTFTE
Trigger: TTCAGTAAAGGTTGAGGTGTTGTTTTTGCAATGACTGTGTATTCATTGAGGAAAGGTTTCCAATGAAATTTCATTACTCTGACCTCTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR TCA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCGCGTTGGTCCAACTGTaGGCCAGCCTGGTCGAATTG +
Preference number: 2 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWIALVQL*ASLVEL
Trigger: CAATTCGACCAGGCTGGCTCACAGTTGGACCAACGC...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
3UTR-3UTR TCA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCTCTCACTTCCCAGGTTaGCACCTTGACCTCTCACAC +
Preference number: 2 (lower is better)
Translates to: PETKSQWPFTNALYAALLSHFPG*HLDLSH
Trigger: GTGTGAGAGGTCAAGGTGTCAACCTGGGAAGTGAGA...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR CAA 90 bp TCTCAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTaGATTCTCACTTCCCAGGTTGACACCTTGACCTCTCACACTGTG +
Preference number: 2 (lower is better)
Translates to: SQLWICELVAMPHSC*ILTSQVDTLTSHTV
Trigger: CACAGTGTGAGAGGTCAAGGTGTCAACCTGGGAAGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR CAA 90 bp CAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCTGTGAGTaGGTTGCCATGCCACACTCCTGCTTGATTCTCACTTCCCAGGTT +
Preference number: 2 (lower is better)
Translates to: QNCCSSDPSQLWICE*VAMPHSCLILTSQV
Trigger: AACCTGGGAAGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR GCA 90 bp GAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAACCAGTCAAGTAGGAAAGCCACCTCTGTGTaGTCCTCCACGGCCCCCTCT +
Preference number: 2 (lower is better)
Translates to: EAILVEVSQFLLYNQSSRKATSV*SSTAPS
Trigger: AGAGGGGGCCGTGGAGGAGCACACAGAGGTGGCTTT...CCTACTTGACTGGTTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628452.2
3UTR-3UTR CCA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTGGTAGGCCCAGGGTATaGAACGTAATAGAGAGCCCT +
Preference number: 2 (lower is better)
Translates to: QLWICELVAMPHSCLILTGRPRV*NVIESP
Trigger: AGGGCTCTCTATTACGTTCCATACCCTGGGCCTACC...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR CCA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAACTCTTCCTCCACCTCTaGGAGCTCCACCTCCTCGGT +
Preference number: 2 (lower is better)
Translates to: DEIVTLISQVPMPCKQQELFLHL*ELHLLG
Trigger: ACCGAGGAGGTGGAGCTCCCAGAGGTGGAGGAAGAG...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
3UTR CAA 90 bp CTTCCTCCACCTCTGGGAGCTCCACCTCCTCGGTCAGATTTAGATTaGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTA +
Preference number: 2 (lower is better)
Translates to: LPPPLGAPPPRSDLD*GGGDFGRSLSISSV
Trigger: TACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATCTAAATCTGACCGAGGAGGTGGAGCTCCCAGAGGTGGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
3UTR-3UTR GCA 90 bp CCCTCTCAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTAGTGTGTGTGACAACTaGAAGCAAGGCTCGCTAAGA +
Preference number: 2 (lower is better)
Translates to: PSQLWICELVAMPHSCLISVCDN*KQGSLR
Trigger: TCTTAGCGAGCCTTGCTTGCAGTTGTCACACACACT...AATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTGAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR CAA 90 bp GCCATGCCACACTCCTGCTTGATTCTCACTTCCCAGGTTGACACCTaGACCTCTCACACTGTGCTGTTTCATGATGACCGTATTACATTC +
Preference number: 2 (lower is better)
Translates to: AMPHSCLILTSQVDT*TSHTVLFHDDRITF
Trigger: GAATGTAATACGGTCATCATGAAACAGCACAGTGTGAGAGGTCAAGGTGTCAACCTGGGAAGTGAGAATCAAGCAGGAGTGTGGCATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR GCA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTACAGAGCAGAACTGCTaGAGTAGTGATCCCTCTCAA +
Preference number: 2 (lower is better)
Translates to: QLWICELVAMPHSCLILTTEQNC*SSDPSQ
Trigger: TTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGT...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR CCA 90 bp ATAGGACAGGGTCACTCCTTAGCTGATACTTCTAAGGACCCATCACAGGCAAGTGCTATTTGTAAGCGTTaGTCCAACTGTGAGCCAGCC +
Preference number: 2 (lower is better)
Translates to: IGQGHSLADTSKDPSQASAICKR*SNCEPA
Trigger: GGCTGGCTCACAGTTGGACCAACGCTTACAAATAGC...ACTTGCCTGTGATGGGTCCTTAGAAGTATCAGCTAAGGAGTGACCCTGTCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
3UTR-3UTR TCA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCAGTGCAAGCTGGAAGTaGGTTCTAAAGTTAAGTCTC +
Preference number: 2 (lower is better)
Translates to: PETKSQWPFTNALYAALLSASWK*VLKLSL
Trigger: GAGACTTAACTTTAGAACTCACTTCCAGCTTGCACT...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR TCA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTGCTGTATCCTTAAGTTaGGGGTTTTCCGTAGTTGGT +
Preference number: 2 (lower is better)
Translates to: QLWICELVAMPHSCLILTAVSLS*GFSVVG
Trigger: ACCAACTACGGAAAACCCTCAACTTAAGGATACAGC...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR TCA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCGGAATTTCTCTATCCTaGCTTCATTCCCAGGTCAAT +
Preference number: 2 (lower is better)
Translates to: PETKSQWPFTNALYAALLGISLS*LHSQVN
Trigger: ATTGACCTGGGAATGAAGTCAGGATAGAGAAATTCC...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR GCA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAATTACAGGCGTGCACATaGCACCACGCCCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: DEIVTLISQVPMPCKQQELQACT*HHAQLI
Trigger: AATTAGCTGGGCGTGGTGGCATGTGCACGCCTGTAA...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR TCA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCTGGTATTTCCAGAAATaGAGTCTTCAATGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: PETKSQWPFTNALYAALLWYFQK*SLQWSQ
Trigger: CTGACTCCATTGAAGACTTCATTTCTGGAAATACCA...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR TCA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTTGTTCCTTTGTTCTCTaGAAGACAGCCTTTGGATCT +
Preference number: 2 (lower is better)
Translates to: QLWICELVAMPHSCLILTCSFVL*KTAFGS
Trigger: AGATCCAAAGGCTGTCTTTCAGAGAACAAAGGAACA...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
3UTR-3UTR GCA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCAGGCATGAGCCACCATaGCCAGCATTTCTAAATAAT +
Preference number: 2 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWIRHEPP*PAFLNN
Trigger: ATTATTTAGAAATGCTGGGCATGGTGGCTCATGCCT...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR TCA 90 bp GAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAACCAGTCAAGTAGGCTGTCAGCACTAGCATaGTACCACAGACTGGATCTT +
Preference number: 2 (lower is better)
Translates to: EAILVEVSQFLLYNQSSRLSALA*YHRLDL
Trigger: AAGATCCAGTCTGTGGTATCATGCTAGTGCTGACAG...CCTACTTGACTGGTTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
3UTR-3UTR TCA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCGAAACCTTTCCTCAATaGATACACAGTCATTGCAAA +
Preference number: 2 (lower is better)
Translates to: PETKSQWPFTNALYAALLETFPQ*IHSHCK
Trigger: TTTGCAATGACTGTGTATTCATTGAGGAAAGGTTTC...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR CCA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCGGAAAAAGGGTTTACTaGAAAAGGATGTCCCAATTA +
Preference number: 2 (lower is better)
Translates to: PETKSQWPFTNALYAALLGKRVY*KRMSQL
Trigger: TAATTGGGACATCCTTTTCCAGTAAACCCTTTTTCC...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR GCA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCCTAAGAAAGACCTTCTaGATAAGCAAAGGTTTATGT +
Preference number: 2 (lower is better)
Translates to: PETKSQWPFTNALYAALLLRKTF*ISKGLC
Trigger: ACATAAACCTTTGCTTATGCAGAAGGTCTTTCTTAG...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR CCA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAACCCATCACAGGCAAGTaGAATTTCTCTATCCTGACT +
Preference number: 2 (lower is better)
Translates to: DEIVTLISQVPMPCKQQEPITGK*NFSILT
Trigger: AGTCAGGATAGAGAAATTCCACTTGCCTGTGATGGG...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR CCA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTAAATATGGTAGATCATaGCTCCCCTTAACTTTCAAC +
Preference number: 2 (lower is better)
Translates to: QLWICELVAMPHSCLILTKYGRS*LPLTFN
Trigger: GTTGAAAGTTAAGGGGAGCCATGATCTACCATATTT...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR TCA 90 bp ATGGCTCCCCTTAACTTTCAACCGACAAAGCAGCCATACCTACCTCTTTCTAAGAAGGTTAGAGGAGGATaGATAGGTTCAATGTCTTCA +
Preference number: 2 (lower is better)
Translates to: MAPLNFQPTKQPYLPLSKKVRGG*IGSMSS
Trigger: TGAAGACATTGAACCTATTCATCCTCCTCTAACCTT...CTTAGAAAGAGGTAGGTATGGCTGCTTTGTCGGTTGAAAGTTAAGGGGAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR TCA 90 bp TTTCCAACTCTATTCTATCAAGGCCCTGTCAGCACTAGCATGATACCACAGACTAGTGCAAGCTGGAAGTaGGTTCTAAAGTTAAGTCTC +
Preference number: 2 (lower is better)
Translates to: FPTLFYQGPVSTSMIPQTSASWK*VLKLSL
Trigger: GAGACTTAACTTTAGAACTCACTTCCAGCTTGCACT...AGTCTGTGGTATCATGCTAGTGCTGACAGGGCCTTGATAGAATAGAGTTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR TCA 90 bp TACTTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATACCAGACAGTGTGTGTaGCAACTGCAAGCAAGGCTC +
Preference number: 2 (lower is better)
Translates to: YLSCSILFTHITKGRIIHTRQCV*QLQARL
Trigger: GAGCCTTGCTTGCAGTTGTCACACACACTGTCTGGT...ATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
3UTR-3UTR TCA 90 bp ATAGGACAGGGTCACTCCTTAGCTGATACTTCTAAGGACCCATCACAGGCAAGTGTACAGCAAGAGAAGTaGCAGCATAAAGTCTTATAT +
Preference number: 2 (lower is better)
Translates to: IGQGHSLADTSKDPSQASVQQEK*QHKVLY
Trigger: ATATAAGACTTTATGCTGTCACTTCTCTTGCTGTAC...ACTTGCCTGTGATGGGTCCTTAGAAGTATCAGCTAAGGAGTGACCCTGTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR TCA 90 bp ATGGCTCCCCTTAACTTTCAACCGACAAAGCAGCCATACCTACCTCTTTCTAAGTGGGTGTTAGTTCTCTaGTGTCAAAGGCTTCTATAT +
Preference number: 2 (lower is better)
Translates to: MAPLNFQPTKQPYLPLSKWVLVL*CQRLLY
Trigger: ATATAGAAGCCTTTGACATCAGAGAACTAACACCCA...CTTAGAAAGAGGTAGGTATGGCTGCTTTGTCGGTTGAAAGTTAAGGGGAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
3UTR-3UTR GCA 90 bp GAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCACTAGTGTGTGTGACAACTaGAAGCAAGGCTCGCTAAGA +
Preference number: 2 (lower is better)
Translates to: EIKAKCKLEVSSKVKSPTSVCDN*KQGSLR
Trigger: TCTTAGCGAGCCTTGCTTGCAGTTGTCACACACACT...AGTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
3UTR-3UTR CCA 90 bp AGAGAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCGGGAGGAGGCGATTTTaGTCGAAGTCTCTCAATTTC +
Preference number: 2 (lower is better)
Translates to: REIKAKCKLEVSSKVKSPGRRRF*SKSLNF
Trigger: GAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCC...GGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
3UTR-3UTR GCA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAAGAAATTAAAGCAAAGTaGAAGCTGGAAGTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: DEIVTLISQVPMPCKQQEEIKAK*KLEVSS
Trigger: AGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR TCA 90 bp ATGAATAGGTTCAATGTCTTCAACAATTATCGAGGTGGAAAGCCACCTCTGTGTAAGGTTAGAGGAGGATaGATAGGTTCAATGTCTTCA +
Preference number: 2 (lower is better)
Translates to: MNRFNVFNNYRGGKPPLCKVRGG*IGSMSS
Trigger: TGAAGACATTGAACCTATTCATCCTCCTCTAACCTT...ACACAGAGGTGGCTTTCCACCTCGATAATTGTTGAAGACATTGAACCTATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
3UTR-3UTR CCA 90 bp TTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATTTACAACAATTATCGAGGTaGAAAGCCACCTCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: LSCSILFTHITKGRIIHLQQLSR*KATSVC
Trigger: GCACACAGAGGTGGCTTTCCACCTCGATAATTGTTG...TAAATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
3UTR CAA 90 bp ATTCTGACTGCCATCATCACAATTCTGTGGTCTAATCTGATTCATTaGTGTTTAGGTATGGTATTCCACACCATAAAATCTGTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: ILTAIITILWSNLIH*CLGMVFHTIKSVLL
Trigger: CAGGAGAACAGATTTTATGGTGTGGAATACCATACCTAAACACAAATGAATCAGATTAGACCACAGAATTGTGATGATGGCAGTCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR TCA 90 bp TTAAGGTACCCACCACAATACATAAACTATAAAGTGACAGCTAATTCCACAAGAAATGCTAGTCACACATaGACCCTAAGATTACAGGAT +
Preference number: 2 (lower is better)
Translates to: LRYPPQYINYKVTANSTRNASHT*TLRLQD
Trigger: ATCCTGTAATCTTAGGGTTCATGTGTGACTAGCATT...TCTTGTGGAATTAGCTGTCACTTTATAGTTTATGTATTGTGGTGGGTACCTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR TCA 90 bp TTAAGGTACCCACCACAATACATAAACTATAAAGTGACAGCTAATTCCACAAGATGGTATTTCCAGAAATaGAGTCTTCAATGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: LRYPPQYINYKVTANSTRWYFQK*SLQWSQ
Trigger: CTGACTCCATTGAAGACTTCATTTCTGGAAATACCA...TCTTGTGGAATTAGCTGTCACTTTATAGTTTATGTATTGTGGTGGGTACCTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR TCA 90 bp TTAAGGTACCCACCACAATACATAAACTATAAAGTGACAGCTAATTCCACAAGATCCTTATCTTCAAACTaGGTCTTTGGTGGATGTAAT +
Preference number: 2 (lower is better)
Translates to: LRYPPQYINYKVTANSTRSLSSN*VFGGCN
Trigger: ATTACATCCACCAAAGACTCAGTTTGAAGATAAGGA...TCTTGTGGAATTAGCTGTCACTTTATAGTTTATGTATTGTGGTGGGTACCTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR TCA 90 bp TTAAGGTACCCACCACAATACATAAACTATAAAGTGACAGCTAATTCCACAAGAGAGAACTCATCAAAGTaGGAAAAAGCACAGATAGAT +
Preference number: 2 (lower is better)
Translates to: LRYPPQYINYKVTANSTRENSSK*EKAQID
Trigger: ATCTATCTGTGCTTTTTCTCACTTTGATGAGTTCTC...TCTTGTGGAATTAGCTGTCACTTTATAGTTTATGTATTGTGGTGGGTACCTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR CCA 72 bp GAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTaGATCTGTGAGTTGGTTGCCATGCCACACTCCTGC +
Preference number: 3 (lower is better)
Translates to: EQNCCSSDPSQL*ICELVAMPHSC
Trigger: GCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR GCA 72 bp CTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTaGTTGATTCTCACTTCCCAGGTTGACACCTTGACC +
Preference number: 3 (lower is better)
Translates to: LWICELVAMPHS*LILTSQVDTLT
Trigger: GGTCAAGGTGTCAACCTGGGAAGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR CCA 72 bp AACAGCAGGAATGTCACCTTGGGTAGGCCCAGGGTATaGAACGTAATAGAGAGCCCTGTGTATAGGACAGGG +
Preference number: 3 (lower is better)
Translates to: NSRNVTLGRPRV*NVIESPVYRTG
Trigger: CCCTGTCCTATACACAGGGCTCTCTATTACGTTCCATACCCTGGGCCTACCCAAGGTGACATTCCTGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR CAA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCTGGGAGGAGGCGATTTaGGTCGAAGTCTCTCAATTT +
Preference number: 3 (lower is better)
Translates to: PETKSQWPFTNALYAALLWEEAI*VEVSQF
Trigger: AAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCA...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
3UTR-3UTR CAA 90 bp ATAGGACAGGGTCACTCCTTAGCTGATACTTCTAAGGACCCATCACAGGCAAGTCGCTTCACAGTTCCTTaGATCCCCATGAGGCAGTGT +
Preference number: 3 (lower is better)
Translates to: IGQGHSLADTSKDPSQASRFTVP*IPMRQC
Trigger: ACACTGCCTCATGGGGATCAAAGGAACTGTGAAGCG...ACTTGCCTGTGATGGGTCCTTAGAAGTATCAGCTAAGGAGTGACCCTGTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
3UTR-3UTR CAA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTTACTCAATCAGTACTTaGGGCCTCCTAATCCCCATC +
Preference number: 3 (lower is better)
Translates to: QLWICELVAMPHSCLILTYSIST*GLLIPI
Trigger: GATGGGGATTAGGAGGCCCAAAGTACTGATTGAGTA...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR GCA 72 bp GCTCTACTACTTACCAGAGTAACAGAGCAGAACTGCTaGAGTAGTGATCCCTCTCAACTCTGGATCTGTGAG +
Preference number: 3 (lower is better)
Translates to: ALLLTRVTEQNC*SSDPSQLWICE
Trigger: CTCACAGATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGTAAGTAGTAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR GCA 72 bp GTGGCTCTACTACTTACCAGAGTAACAGAGCAGAACTaGTGCAGTAGTGATCCCTCTCAACTCTGGATCTGT +
Preference number: 3 (lower is better)
Translates to: VALLLTRVTEQN*CSSDPSQLWIC
Trigger: ACAGATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGTAAGTAGTAGAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR CAA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCAGCTGTATCCTTAAGTaGAGGGTTTTCCGTAGTTGG +
Preference number: 3 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWISCILK*RVFRSW
Trigger: CCAACTACGGAAAACCCTCAACTTAAGGATACAGCT...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR CAA 90 bp TTCATTGGAAACCTTTCCTCAATGAATACACAGTCATTGCAAAAACAACACCTCAGCAGGAATGTCACCTaGGGTAGGCCCAGGGTATGG +
Preference number: 3 (lower is better)
Translates to: FIGNLSSMNTQSLQKQHLSRNVT*GRPRVW
Trigger: CCATACCCTGGGCCTACCCAAGGTGACATTCCTGCT...GAGGTGTTGTTTTTGCAATGACTGTGTATTCATTGAGGAAAGGTTTCCAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR CAA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAACGGTCAGATTTAGATTaGGGAGGAGGCGATTTTGGT +
Preference number: 3 (lower is better)
Translates to: DEIVTLISQVPMPCKQQERSDLD*GGGDFG
Trigger: ACCAAAATCGCCTCCTCCCAAATCTAAATCTGACCG...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
3UTR TCA 72 bp AACCGACAAAGCAGCCATACCTACCTCTTTCTAAGATaGAATTGTGACACTGATCTCACAGGTGCCTATGCC +
Preference number: 3 (lower is better)
Translates to: NRQSSHTYLFLR*NCDTDLTGAYA
Trigger: GGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATCTTAGAAAGAGGTAGGTATGGCTGCTTTGTCGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR CAA 90 bp ATGGCTCCCCTTAACTTTCAACCGACAAAGCAGCCATACCTACCTCTTTCTAAGCTCGCTAAGACATTCTaGCAGCTCAGAGAAATTAAA +
Preference number: 3 (lower is better)
Translates to: MAPLNFQPTKQPYLPLSKLAKTF*QLREIK
Trigger: TTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAG...CTTAGAAAGAGGTAGGTATGGCTGCTTTGTCGGTTGAAAGTTAAGGGGAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR CAA 90 bp CTGCAAGCAAGGCTCGCTAAGACATTCTTGCAGCTCAGAGAAATTAAAGCAAAGATGAAGCTACTTGAGTaGTTCCATTCTGTTCACGCA +
Preference number: 3 (lower is better)
Translates to: LQARLAKTFLQLREIKAKMKLLE*FHSVHA
Trigger: TGCGTGAACAGAATGGAACAACTCAAGTAGCTTCAT...CTTTGCTTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAGCCTTGCTTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
3UTR-3UTR CAA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAAAATATTTGTCCTCCTTaGCTTCTTAGGAAGCGTGAT +
Preference number: 3 (lower is better)
Translates to: DEIVTLISQVPMPCKQQENICPP*LLRKRD
Trigger: ATCACGCTTCCTAAGAAGCAAAGGAGGACAAATATT...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR CAA 90 bp GAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCACTCGGTCAGATTTAGATTaGGGAGGAGGCGATTTTGGT +
Preference number: 3 (lower is better)
Translates to: EIKAKCKLEVSSKVKSPTRSDLD*GGGDFG
Trigger: ACCAAAATCGCCTCCTCCCAAATCTAAATCTGACCG...AGTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
3UTR TCA 72 bp AAGCCTAGACCTCCACATTTTCCCCCATTGGATAGATaGATGGCTTGCAATGACATCATTATACGGCAATTT +
Preference number: 3 (lower is better)
Translates to: KPRPPHFPPLDR*MACNDIIIRQF
Trigger: AAATTGCCGTATAATGATGTCATTGCAAGCCATTCATCTATCCAATGGGGGAAAATGTGGAGGTCTAGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR TCA 72 bp AATCTGTCAGCTAAACCTACATCCCTGATGAAATTCTaGGGTCTATGTCCAGTGTCTACAAAATGTTGGCAG +
Preference number: 3 (lower is better)
Translates to: NLSAKPTSLMKF*GLCPVSTKCWQ
Trigger: CTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGATGTAGGTTTAGCTGACAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626212.2
ENST00000628452.2
3UTR-3UTR CAA 90 bp CTGCAAGCAAGGCTCGCTAAGACATTCTTGCAGCTCAGAGAAATTAAAGCAAAGAGAATCACATCAAATTaGGGTGTTAGTTCTCTGATG +
Preference number: 3 (lower is better)
Translates to: LQARLAKTFLQLREIKAKRITSN*GVSSLM
Trigger: CATCAGAGAACTAACACCCAAATTTGATGTGATTCT...CTTTGCTTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAGCCTTGCTTGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
3UTR TCA 72 bp CAGCCTGGTCGAATTGTACTATCTCTTCCAAATAGATaGAGGCGTCTTCTACCAAGACAAAAATGCTCAATT +
Preference number: 3 (lower is better)
Translates to: QPGRIVLSLPNR*RRLLPRQKCSI
Trigger: AATTGAGCATTTTTGTCTTGGTAGAAGACGCCTTCATCTATTTGGAAGAGATAGTACAATTCGACCAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628452.2
3UTR TCA 72 bp CAACTCTATTCTATCAAGGCCCTGTCAGCACTAGCATaGTACCACAGACTGGATCTTTTTCCATTATTTATT +
Preference number: 3 (lower is better)
Translates to: QLYSIKALSALA*YHRLDLFPLFI
Trigger: AATAAATAATGGAAAAAGATCCAGTCTGTGGTATCATGCTAGTGCTGACAGGGCCTTGATAGAATAGAGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR TCA 72 bp ACCCAACATCAAAGAGAGGATAATGCTAGTCACACATaGACCCTAAGATTACAGGATTGTTCTAAGAAAGAC +
Preference number: 3 (lower is better)
Translates to: TQHQREDNASHT*TLRLQDCSKKD
Trigger: GTCTTTCTTAGAACAATCCTGTAATCTTAGGGTTCATGTGTGACTAGCATTATCCTCTCTTTGATGTTGGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR-3UTR CAA 90 bp TTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATTTACTCGCTAAGACATTCTaGCAGCTCAGAGAAATTAAA +
Preference number: 3 (lower is better)
Translates to: LSCSILFTHITKGRIIHLLAKTF*QLREIK
Trigger: TTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAG...TAAATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
3UTR-3UTR CAA 90 bp TTAAGGTACCCACCACAATACATAAACTATAAAGTGACAGCTAATTCCACAAGACTCGCTAAGACATTCTaGCAGCTCAGAGAAATTAAA +
Preference number: 3 (lower is better)
Translates to: LRYPPQYINYKVTANSTRLAKTF*QLREIK
Trigger: TTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAG...TCTTGTGGAATTAGCTGTCACTTTATAGTTTATGTATTGTGGTGGGTACCTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp ATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTCCACCTCTGGGAAAGCCACCTCTGTGTaGTCCTCCACGGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ISFSSTASRSSTSSSTSGKATSV*SSTAPS
Trigger: AGAGGGGGCCGTGGAGGAGCACACAGAGGTGGCTTT...CCCAGAGGTGGAGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CCA 90 bp CCCTCTCAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCTTCCTCCACCTCTaGGAGCTCCACCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: PSQLWICELVAMPHSCLILFLHL*ELHLLG
Trigger: ACCGAGGAGGTGGAGCTCCCAGAGGTGGAGGAAGAG...AATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTGAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp ATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTCCACCTCTGGGTTACAGGCGTGCACATaGCACCACGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: ISFSSTASRSSTSSSTSGLQACT*HHAQLI
Trigger: AATTAGCTGGGCGTGGTGGCATGTGCACGCCTGTAA...CCCAGAGGTGGAGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTGCGTTGGTCCAACTGTaGGCCAGCCTGGTCGAATTG +
Preference number: 4 (lower is better)
Translates to: QLWICELVAMPHSCLILTALVQL*ASLVEL
Trigger: CAATTCGACCAGGCTGGCTCACAGTTGGACCAACGC...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTCGCTCCCGGATCTCCTaGAAGCGGCTATCCATGTTC +
Preference number: 4 (lower is better)
Translates to: QLWICELVAMPHSCLILTRSRIS*KRLSMF
Trigger: GAACATGGATAGCCGCTTGCAGGAGATCCGGGAGCG...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp ATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTCCACCTCTGGGGCTATTTGTAAGCGTTaGTCCAACTGTGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: ISFSSTASRSSTSSSTSGAICKR*SNCEPA
Trigger: GGCTGGCTCACAGTTGGACCAACGCTTACAAATAGC...CCCAGAGGTGGAGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR GCA 90 bp ATGGCTCCCCTTAACTTTCAACCGACAAAGCAGCCATACCTACCTCTTTCTAAGAAAGCCACCTCTGTGTaGTCCTCCACGGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: MAPLNFQPTKQPYLPLSKKATSV*SSTAPS
Trigger: AGAGGGGGCCGTGGAGGAGCACACAGAGGTGGCTTT...CTTAGAAAGAGGTAGGTATGGCTGCTTTGTCGGTTGAAAGTTAAGGGGAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCCCTGGAGGCGGAGGTTaGAGTGAGCCAAGATCTTAT +
Preference number: 4 (lower is better)
Translates to: PETKSQWPFTNALYAALLPGGGG*SEPRSY
Trigger: ATAAGATCTTGGCTCACTGCAACCTCCGCCTCCAGG...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp ATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTCCACCTCTGGGGAGACCAAGAGTCAGTaGCCATTTACTAACGCACTC +
Preference number: 4 (lower is better)
Translates to: ISFSSTASRSSTSSSTSGETKSQ*PFTNAL
Trigger: GAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTC...CCCAGAGGTGGAGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp CTTCTAAGGACCCATCACAGGCAAGTGGAATTTCTCTATCCTGACTTCATTCCCGCGTTGGTCCAACTGTaGGCCAGCCTGGTCGAATTG +
Preference number: 4 (lower is better)
Translates to: LLRTHHRQVEFLYPDFIPALVQL*ASLVEL
Trigger: CAATTCGACCAGGCTGGCTCACAGTTGGACCAACGC...GGGAATGAAGTCAGGATAGAGAAATTCCACTTGCCTGTGATGGGTCCTTAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp CCCTCTCAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTTCAACTCTGGATCTGTaGGTTGGTTGCCATGCCACA +
Preference number: 4 (lower is better)
Translates to: PSQLWICELVAMPHSCLISTLDL*VGCHAT
Trigger: TGTGGCATGGCAACCAACTCACAGATCCAGAGTTGA...AATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTGAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp TCCTCGGAAGTTAGATCTATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCAGGCGGAGGTTGCAGTaGGCCAAGATCTTATCACTG +
Preference number: 4 (lower is better)
Translates to: SSEVRSISFSSTASRSSTRRRLQ*AKILSL
Trigger: CAGTGATAAGATCTTGGCTCACTGCAACCTCCGCCT...GGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAATAGATCTAACTTCCGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR GCA 90 bp CCCTCTCAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTTTAACACGGCACCAATaGTGTCGGCACTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PSQLWICELVAMPHSCLILTRHQ*CRHFQL
Trigger: GAGCTGAAAGTGCCGACAGCATTGGTGCCGTGTTAA...AATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTGAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAAAAAGCCACCTCTGTGTaGTCCTCCACGGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: DEIVTLISQVPMPCKQQEKATSV*SSTAPS
Trigger: AGAGGGGGCCGTGGAGGAGCACACAGAGGTGGCTTT...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp GATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAACCACTCTTCCTCCACCTCTaGGAGCTCCACCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: DLGGGDFGRSLSISSVQPLFLHL*ELHLLG
Trigger: ACCGAGGAGGTGGAGCTCCCAGAGGTGGAGGAAGAG...TGGTTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
3UTR CAA 72 bp TGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTaGATTCTCACTTCCCAGGTTGACACCTTGACCTCT +
Preference number: 4 (lower is better)
Translates to: WICELVAMPHSC*ILTSQVDTLTS
Trigger: AGAGGTCAAGGTGTCAACCTGGGAAGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR CAA 72 bp CCTCTGGGAGCTCCACCTCCTCGGTCAGATTTAGATTaGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATT +
Preference number: 4 (lower is better)
Translates to: PLGAPPPRSDLD*GGGDFGRSLSI
Trigger: AATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATCTAAATCTGACCGAGGAGGTGGAGCTCCCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CCA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCGCTATTTGTAAGCGTTaGTCCAACTGTGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWIAICKR*SNCEPA
Trigger: GGCTGGCTCACAGTTGGACCAACGCTTACAAATAGC...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR CAA 72 bp CACTCCTGCTTGATTCTCACTTCCCAGGTTGACACCTaGACCTCTCACACTGTGCTGTTTCATGATGACCGT +
Preference number: 4 (lower is better)
Translates to: HSCLILTSQVDT*TSHTVLFHDDR
Trigger: ACGGTCATCATGAAACAGCACAGTGTGAGAGGTCAAGGTGTCAACCTGGGAAGTGAGAATCAAGCAGGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR CAA 72 bp TGCAGTAGTGATCCCTCTCAACTCTGGATCTGTGAGTaGGTTGCCATGCCACACTCCTGCTTGATTCTCACT +
Preference number: 4 (lower is better)
Translates to: CSSDPSQLWICE*VAMPHSCLILT
Trigger: AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTGAGAGGGATCACTACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp CCCTCTCAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTGCTGTATCCTTAAGTTaGGGGTTTTCCGTAGTTGGT +
Preference number: 4 (lower is better)
Translates to: PSQLWICELVAMPHSCLIAVSLS*GFSVVG
Trigger: ACCAACTACGGAAAACCCTCAACTTAAGGATACAGC...AATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp ATGGCTCCCCTTAACTTTCAACCGACAAAGCAGCCATACCTACCTCTTTCTAAGTGCCACACTCCTGCTTaGTTCTCACTTCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: MAPLNFQPTKQPYLPLSKCHTPA*FSLPRL
Trigger: CAACCTGGGAAGTGAGAATCAAGCAGGAGTGTGGCA...CTTAGAAAGAGGTAGGTATGGCTGCTTTGTCGGTTGAAAGTTAAGGGGAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp ATGGCTCCCCTTAACTTTCAACCGACAAAGCAGCCATACCTACCTCTTTCTAAGATAGTTGCTATGGCCTaGGACCAAGAGTCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: MAPLNFQPTKQPYLPLSKIVAMA*DQESVA
Trigger: GGCCACTGACTCTTGGTCTCAGGCCATAGCAACTAT...CTTAGAAAGAGGTAGGTATGGCTGCTTTGTCGGTTGAAAGTTAAGGGGAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCGTAGGGAAATGCACATaGACATCTCAGACTTACCCT +
Preference number: 4 (lower is better)
Translates to: PETKSQWPFTNALYAALLVGKCT*TSQTYP
Trigger: AGGGTAAGTCTGAGATGTTCATGTGCATTTCCCTAC...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp CTTCTAAGGACCCATCACAGGCAAGTGGAATTTCTCTATCCTGACTTCATTCCCAGCTACTCAGGAGGCTaGGGCAGAAGAATCGCTTCA +
Preference number: 4 (lower is better)
Translates to: LLRTHHRQVEFLYPDFIPSYSGG*GRRIAS
Trigger: TGAAGCGATTCTTCTGCCTCAGCCTCCTGAGTAGCT...GGGAATGAAGTCAGGATAGAGAAATTCCACTTGCCTGTGATGGGTCCTTAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp CCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTAATCTGTCGCCGTAACTTCTaGCGCTCCCGGATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PDEILRSMSSVYKMLAVICRRNF*RSRISC
Trigger: GCAGGAGATCCGGGAGCGGCAGAAGTTACGGCGACA...GATTACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626212.2
ENST00000628452.2
CDS-3UTR GCA 90 bp CTTCTAAGGACCCATCACAGGCAAGTGGAATTTCTCTATCCTGACTTCATTCCCTTACAGGCGTGCACATaGCACCACGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: LLRTHHRQVEFLYPDFIPLQACT*HHAQLI
Trigger: AATTAGCTGGGCGTGGTGGCATGTGCACGCCTGTAA...GGGAATGAAGTCAGGATAGAGAAATTCCACTTGCCTGTGATGGGTCCTTAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp CTTCTAAGGACCCATCACAGGCAAGTGGAATTTCTCTATCCTGACTTCATTCCCCCTGGAGGCGGAGGTTaGAGTGAGCCAAGATCTTAT +
Preference number: 4 (lower is better)
Translates to: LLRTHHRQVEFLYPDFIPPGGGG*SEPRSY
Trigger: ATAAGATCTTGGCTCACTGCAACCTCCGCCTCCAGG...GGGAATGAAGTCAGGATAGAGAAATTCCACTTGCCTGTGATGGGTCCTTAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCAACTGTGAGCCAGCCTaGTCGAATTGTACTATCTCT +
Preference number: 4 (lower is better)
Translates to: PETKSQWPFTNALYAALLNCEPA*SNCTIS
Trigger: AGAGATAGTACAATTCGACCAGGCTGGCTCACAGTT...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCGGGAGGAGGCGATTTTaGTCGAAGTCTCTCAATTTC +
Preference number: 4 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWIGRRRF*SKSLNF
Trigger: GAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCC...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCCCCATCACAGGCAAGTaGAATTTCTCTATCCTGACT +
Preference number: 4 (lower is better)
Translates to: PETKSQWPFTNALYAALLPITGK*NFSILT
Trigger: AGTCAGGATAGAGAAATTCCACTTGCCTGTGATGGG...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp ATAGGACAGGGTCACTCCTTAGCTGATACTTCTAAGGACCCATCACAGGCAAGTGATCCCTCTCAACTCTaGATCTGTGAGTTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: IGQGHSLADTSKDPSQASDPSQL*ICELVA
Trigger: GGCAACCAACTCACAGATCCAGAGTTGAGAGGGATC...ACTTGCCTGTGATGGGTCCTTAGAAGTATCAGCTAAGGAGTGACCCTGTCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp CTGCAAGCAAGGCTCGCTAAGACATTCTTGCAGCTCAGAGAAATTAAAGCAAAGACCAGACAGTGTGTGTaGCAACTGCAAGCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: LQARLAKTFLQLREIKAKTRQCV*QLQARL
Trigger: GAGCCTTGCTTGCAGTTGTCACACACACTGTCTGGT...CTTTGCTTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAGCCTTGCTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
CDS-3UTR TCA 90 bp GAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAACCAGTCAAGTAGGTGCCACACTCCTGCTTaGTTCTCACTTCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: EAILVEVSQFLLYNQSSRCHTPA*FSLPRL
Trigger: CAACCTGGGAAGTGAGAATCAAGCAGGAGTGTGGCA...CCTACTTGACTGGTTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCACTATAGCATATCACTaGCCTGGCCTCAGAATAAGG +
Preference number: 4 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWITIAYH*PGLRIR
Trigger: CCTTATTCTGAGGCCAGGTCAGTGATATGCTATAGT...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp TTTCCAACTCTATTCTATCAAGGCCCTGTCAGCACTAGCATGATACCACAGACTAGCTACTCAGGAGGCTaGGGCAGAAGAATCGCTTCA +
Preference number: 4 (lower is better)
Translates to: FPTLFYQGPVSTSMIPQTSYSGG*GRRIAS
Trigger: TGAAGCGATTCTTCTGCCTCAGCCTCCTGAGTAGCT...AGTCTGTGGTATCATGCTAGTGCTGACAGGGCCTTGATAGAATAGAGTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp TTAGATCTATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTCCACCCCCATTGGATAGATaGATGGCTTGCAATGACATC +
Preference number: 4 (lower is better)
Translates to: LDLFLSRPRPAEVPPLPPPPLDR*MACNDI
Trigger: GATGTCATTGCAAGCCATTCATCTATCCAATGGGGG...TGGAGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAATAGATCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR GCA 90 bp ATCCCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTACGCTCCCGGATCTCCTaGAAGCGGCTATCCATGTTC +
Preference number: 4 (lower is better)
Translates to: IPDEILRSMSSVYKMLAVRSRIS*KRLSMF
Trigger: GAACATGGATAGCCGCTTGCAGGAGATCCGGGAGCG...TACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626212.2
ENST00000628452.2
CDS-3UTR GCA 90 bp AGAGAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCTGTCGCCGTAACTTCTaGCGCTCCCGGATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: REIKAKCKLEVSSKVKSPCRRNF*RSRISC
Trigger: GCAGGAGATCCGGGAGCGGCAGAAGTTACGGCGACA...GGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp TACTTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATTCAGCTCCCAACTGCTaGGCGAGGAGCTGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: YLSCSILFTHITKGRIIHSAPNC*ARSCRR
Trigger: ACGGCGACAGCTCCTCGCGCAGCAGTTGGGAGCTGA...ATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTACATCATCAACTACCTaGCCTCTTCTTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: QLWICELVAMPHSCLILTTSSTT*PLLSPQ
Trigger: CTGTGGAGAAAGAAGAGGGCAGGTAGTTGATGATGT...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp ATAGGACAGGGTCACTCCTTAGCTGATACTTCTAAGGACCCATCACAGGCAAGTCAACAATTATCGAGGTaGAAAGCCACCTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: IGQGHSLADTSKDPSQASQQLSR*KATSVC
Trigger: GCACACAGAGGTGGCTTTCCACCTCGATAATTGTTG...ACTTGCCTGTGATGGGTCCTTAGAAGTATCAGCTAAGGAGTGACCCTGTCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp TTTCCAACTCTATTCTATCAAGGCCCTGTCAGCACTAGCATGATACCACAGACTGGTAGGCCCAGGGTATaGAACGTAATAGAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: FPTLFYQGPVSTSMIPQTGRPRV*NVIESP
Trigger: AGGGCTCTCTATTACGTTCCATACCCTGGGCCTACC...AGTCTGTGGTATCATGCTAGTGCTGACAGGGCCTTGATAGAATAGAGTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTAGCATATCACTGACCTaGCCTCAGAATAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: QLWICELVAMPHSCLILTSISLT*PQNKGD
Trigger: ATCTCCCTTATTCTGAGGCCAGGTCAGTGATATGCT...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp ATAGGACAGGGTCACTCCTTAGCTGATACTTCTAAGGACCCATCACAGGCAAGTGAGACCAAGAGTCAGTaGCCATTTACTAACGCACTC +
Preference number: 4 (lower is better)
Translates to: IGQGHSLADTSKDPSQASETKSQ*PFTNAL
Trigger: GAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTC...ACTTGCCTGTGATGGGTCCTTAGAAGTATCAGCTAAGGAGTGACCCTGTCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp CCCTCTCAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTTTTAAATATGCATGTTaGCCAGTTGCAGAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PSQLWICELVAMPHSCLIFKYAC*PVAEAH
Trigger: GTGAGCCTCTGCAACTGGCCAACATGCATATTTAAA...AATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTGAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTCTTGTCAATCTCCAGTaGACTCTTATCCAACCTTTC +
Preference number: 4 (lower is better)
Translates to: QLWICELVAMPHSCLILTLVNLQ*TLIQPF
Trigger: GAAAGGTTGGATAAGAGTTCACTGGAGATTGACAAG...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCTGGGTGTTAGTTCTCTaGTGTCAAAGGCTTCTATAT +
Preference number: 4 (lower is better)
Translates to: PETKSQWPFTNALYAALLWVLVL*CQRLLY
Trigger: ATATAGAAGCCTTTGACATCAGAGAACTAACACCCA...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCCCAGAGAAAAATAAATaGTCGAGGTGCTGCAATCTC +
Preference number: 4 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWIPEKNK*SRCCNL
Trigger: GAGATTGCAGCACCTCGATCATTTATTTTTCTCTGG...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp TCCTCGGAAGTTAGATCTATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTCTTCCAAATAGATaGAGGCGTCTTCTACCAAGA +
Preference number: 4 (lower is better)
Translates to: SSEVRSISFSSTASRSSTSLPNR*RRLLPR
Trigger: TCTTGGTAGAAGACGCCTTCATCTATTTGGAAGAGA...GGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAATAGATCTAACTTCCGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp TCCTCGGAAGTTAGATCTATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCAGTGCAAGCTGGAAGTaGGTTCTAAAGTTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSEVRSISFSSTASRSSTSASWK*VLKLSL
Trigger: GAGACTTAACTTTAGAACTCACTTCCAGCTTGCACT...GGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAATAGATCTAACTTCCGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR TCA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCGACCGTATTACATTCTaGCTGCCATCATCACAATTC +
Preference number: 4 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWIDRITF*LPSSQF
Trigger: GAATTGTGATGATGGCAGTCAGAATGTAATACGGTC...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAATCAACTCTGGATCTGTaGGTTGGTTGCCATGCCACA +
Preference number: 4 (lower is better)
Translates to: DEIVTLISQVPMPCKQQESTLDL*VGCHAT
Trigger: TGTGGCATGGCAACCAACTCACAGATCCAGAGTTGA...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTACAATTAGCTGGAGCTaGCAAGTGATGTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: QLWICELVAMPHSCLILTTISWS*QVMSTL
Trigger: TAAAGTGGACATCACTTGTCAGCTCCAGCTAATTGT...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp ATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTCCACCTCTGGGCTAAGAAAGACCTTCTaGATAAGCAAAGGTTTATGT +
Preference number: 4 (lower is better)
Translates to: ISFSSTASRSSTSSSTSGLRKTF*ISKGLC
Trigger: ACATAAACCTTTGCTTATGCAGAAGGTCTTTCTTAG...CCCAGAGGTGGAGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR GCA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTTCTTCTCTCTATAGTTaGTATGGCCTGAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: QLWICELVAMPHSCLILTSSLYS*YGLRPR
Trigger: TCTTGGTCTCAGGCCATAGCAACTATAGAGAGAAGA...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp AAGTTAGATCTATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTCAACAATTATCGAGGTaGAAAGCCACCTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: KLDLFLSRPRPAEVPPLPQQLSR*KATSVC
Trigger: GCACACAGAGGTGGCTTTCCACCTCGATAATTGTTG...AGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAATAGATCTAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CCA 90 bp TTAGATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAAGCAGGAATGTCACCTTaGGTAGGCCCAGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: LDLGGGDFGRSLSISSVQAGMSP*VGPGYG
Trigger: TCCATACCCTGGGCCTACCCAAGGTGACATTCCTGC...TTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR CCA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAATCTGGATCTGTGAGTTaGTTGCCATGCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: DEIVTLISQVPMPCKQQESGSVS*LPCHTP
Trigger: AGGAGTGTGGCATGGCAACCAACTCACAGATCCAGA...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp ATGGCTCCCCTTAACTTTCAACCGACAAAGCAGCCATACCTACCTCTTTCTAAGATGTCAACATTAGCATaGATGAAGTCCCCGTCTGTG +
Preference number: 4 (lower is better)
Translates to: MAPLNFQPTKQPYLPLSKMSTLA*MKSPSV
Trigger: CACAGACGGGGACTTCATTCATGCTAATGTTGACAT...CTTAGAAAGAGGTAGGTATGGCTGCTTTGTCGGTTGAAAGTTAAGGGGAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTGAAGATGAAGCTACTTaGGTTGTTCCATTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: QLWICELVAMPHSCLILTEDEAT*VVPFCS
Trigger: TGAACAGAATGGAACAACTCAAGTAGCTTCATCTTC...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCGTACAGCAAGAGAAGTaGCAGCATAAAGTCTTATAT +
Preference number: 4 (lower is better)
Translates to: PETKSQWPFTNALYAALLVQQEK*QHKVLY
Trigger: ATATAAGACTTTATGCTGTCACTTCTCTTGCTGTAC...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp ATCCCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTACTAATCCCCATCCTCTaGAAGGAGGAAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: IPDEILRSMSSVYKMLAVLIPIL*KEEGQW
Trigger: CCACTGACCTTCCTCCTTTCAGAGGATGGGGATTAG...TACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCAATGCTAGTCACACATaGACCCTAAGATTACAGGAT +
Preference number: 4 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWINASHT*TLRLQD
Trigger: ATCCTGTAATCTTAGGGTTCATGTGTGACTAGCATT...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp TTAGATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAAATAGTTGCTATGGCCTaGGACCAAGAGTCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: LDLGGGDFGRSLSISSVQIVAMA*DQESVA
Trigger: GGCCACTGACTCTTGGTCTCAGGCCATAGCAACTAT...TTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp CTTCTAAGGACCCATCACAGGCAAGTGGAATTTCTCTATCCTGACTTCATTCCCGTAGGGAAATGCACATaGACATCTCAGACTTACCCT +
Preference number: 4 (lower is better)
Translates to: LLRTHHRQVEFLYPDFIPVGKCT*TSQTYP
Trigger: AGGGTAAGTCTGAGATGTTCATGTGCATTTCCCTAC...GGGAATGAAGTCAGGATAGAGAAATTCCACTTGCCTGTGATGGGTCCTTAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp CCCTCTCAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTATGAATGGCTTGCAATaGCATCATTATACGGCAATT +
Preference number: 4 (lower is better)
Translates to: PSQLWICELVAMPHSCLIMNGLQ*HHYTAI
Trigger: AATTGCCGTATAATGATGTCATTGCAAGCCATTCAT...AATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTGAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCATGAATGGCTTGCAATaGCATCATTATACGGCAATT +
Preference number: 4 (lower is better)
Translates to: PETKSQWPFTNALYAALLMNGLQ*HHYTAI
Trigger: AATTGCCGTATAATGATGTCATTGCAAGCCATTCAT...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp GAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCACTGCGTTGGTCCAACTGTaGGCCAGCCTTTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: EIKAKCKLEVSSKVKSPTALVQL*ASLCSL
Trigger: CAGAGAACAAAGGCTGGCTCACAGTTGGACCAACGC...AGTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506780.2
CDS-3UTR GCA 90 bp TTTCCAACTCTATTCTATCAAGGCCCTGTCAGCACTAGCATGATACCACAGACTAGTGTGTGTGACAACTaGAAGCAAGGCTCGCTAAGA +
Preference number: 4 (lower is better)
Translates to: FPTLFYQGPVSTSMIPQTSVCDN*KQGSLR
Trigger: TCTTAGCGAGCCTTGCTTGCAGTTGTCACACACACT...AGTCTGTGGTATCATGCTAGTGCTGACAGGGCCTTGATAGAATAGAGTTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp CTTCTAAGGACCCATCACAGGCAAGTGGAATTTCTCTATCCTGACTTCATTCCCTCTCACAGGTGCCTATaGCATGTAAACAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LLRTHHRQVEFLYPDFIPSHRCL*HVNSRN
Trigger: ATTCCTGCTGTTTACATGGCATAGGCACCTGTGAGA...GGGAATGAAGTCAGGATAGAGAAATTCCACTTGCCTGTGATGGGTCCTTAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp ATAGGACAGGGTCACTCCTTAGCTGATACTTCTAAGGACCCATCACAGGCAAGTAGGCATGAGCCACCATaGCCAGCATTTCTAAATAAT +
Preference number: 4 (lower is better)
Translates to: IGQGHSLADTSKDPSQASRHEPP*PAFLNN
Trigger: ATTATTTAGAAATGCTGGGCATGGTGGCTCATGCCT...ACTTGCCTGTGATGGGTCCTTAGAAGTATCAGCTAAGGAGTGACCCTGTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp GATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAACCAGTAACAGAGCAGAACTaGTGCAGTAGTGATCCCTCT +
Preference number: 4 (lower is better)
Translates to: DLGGGDFGRSLSISSVQPVTEQN*CSSDPS
Trigger: AGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTAC...TGGTTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR CCA 90 bp GATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAACCAGGGAGGAGGCGATTTTaGTCGAAGTCTCTCAATTTC +
Preference number: 4 (lower is better)
Translates to: DLGGGDFGRSLSISSVQPGRRRF*SKSLNF
Trigger: GAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCC...TGGTTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CCA 90 bp TTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATTTACTCTTCCTCCACCTCTaGGAGCTCCACCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: LSCSILFTHITKGRIIHLLFLHL*ELHLLG
Trigger: ACCGAGGAGGTGGAGCTCCCAGAGGTGGAGGAAGAG...TAAATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CCA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAACAACAATTATCGAGGTaGAAAGCCACCTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: DEIVTLISQVPMPCKQQEQQLSR*KATSVC
Trigger: GCACACAGAGGTGGCTTTCCACCTCGATAATTGTTG...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp GAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCACTGTAATCCTGACACTTTaGGAGGCCAGGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: EIKAKCKLEVSSKVKSPTVILTL*EARVGG
Trigger: TCCACCCACCCTGGCCTCCCAAAGTGTCAGGATTAC...AGTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp AGAGAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCGTAATCCTGACACTTTaGGAGGCCAGGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: REIKAKCKLEVSSKVKSPVILTL*EARVGG
Trigger: TCCACCCACCCTGGCCTCCCAAAGTGTCAGGATTAC...GGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp TTTCCAACTCTATTCTATCAAGGCCCTGTCAGCACTAGCATGATACCACAGACTATGTCAACATTAGCATaGATGAAGTCCCCGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FPTLFYQGPVSTSMIPQTMSTLA*MKSPSV
Trigger: CACAGACGGGGACTTCATTCATGCTAATGTTGACAT...AGTCTGTGGTATCATGCTAGTGCTGACAGGGCCTTGATAGAATAGAGTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp ATGGCTCCCCTTAACTTTCAACCGACAAAGCAGCCATACCTACCTCTTTCTAAGTCTCTTCCAAATAGATaGAGGCGTCTTCTACCAAGA +
Preference number: 4 (lower is better)
Translates to: MAPLNFQPTKQPYLPLSKSLPNR*RRLLPR
Trigger: TCTTGGTAGAAGACGCCTTCATCTATTTGGAAGAGA...CTTAGAAAGAGGTAGGTATGGCTGCTTTGTCGGTTGAAAGTTAAGGGGAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp TTAGATCTATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTCCAAAGGTTAGAGGAGGATaGATAGGTTCAATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LDLFLSRPRPAEVPPLPPKVRGG*IGSMSS
Trigger: TGAAGACATTGAACCTATTCATCCTCCTCTAACCTT...TGGAGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAATAGATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR TCA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCTACCTCTTTCTAAGATaGAATTGTGACACTGATCTC +
Preference number: 4 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWIYLFLR*NCDTDL
Trigger: GAGATCAGTGTCACAATTTCATCTTAGAAAGAGGTA...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp AGAGAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCCTAATCCCCATCCTCTaGAAGGAGGAAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: REIKAKCKLEVSSKVKSPLIPIL*KEEGQW
Trigger: CCACTGACCTTCCTCCTTTCAGAGGATGGGGATTAG...GGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp CTGCAAGCAAGGCTCGCTAAGACATTCTTGCAGCTCAGAGAAATTAAAGCAAAGACTATAGCATATCACTaGCCTGGCCTCAGAATAAGG +
Preference number: 4 (lower is better)
Translates to: LQARLAKTFLQLREIKAKTIAYH*PGLRIR
Trigger: CCTTATTCTGAGGCCAGGTCAGTGATATGCTATAGT...CTTTGCTTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAGCCTTGCTTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTGAGAACTCATCAAAGTaGGAAAAAGCACAGATAGAT +
Preference number: 4 (lower is better)
Translates to: QLWICELVAMPHSCLILTENSSK*EKAQID
Trigger: ATCTATCTGTGCTTTTTCTCACTTTGATGAGTTCTC...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp ATGAATAGGTTCAATGTCTTCAACAATTATCGAGGTGGAAAGCCACCTCTGTGTCTCTTCTCTCTGTGGTaGCAATTAGCTGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: MNRFNVFNNYRGGKPPLCLFSLW*QLAGAD
Trigger: GTCAGCTCCAGCTAATTGTCACCACAGAGAGAAGAG...ACACAGAGGTGGCTTTCCACCTCGATAATTGTTGAAGACATTGAACCTATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR GCA 90 bp ATCCCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTATTAACACGGCACCAATaGTGTCGGCACTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: IPDEILRSMSSVYKMLAVLTRHQ*CRHFQL
Trigger: GAGCTGAAAGTGCCGACAGCATTGGTGCCGTGTTAA...TACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626212.2
ENST00000628452.2
CDS-3UTR GCA 90 bp ATGGCTCCCCTTAACTTTCAACCGACAAAGCAGCCATACCTACCTCTTTCTAAGCTCTCTGCTCATCTTTaGTATTTAACACGGCACCAA +
Preference number: 4 (lower is better)
Translates to: MAPLNFQPTKQPYLPLSKLSAHL*YLTRHQ
Trigger: TTGGTGCCGTGTTAAATAGCAAAGATGAGCAGAGAG...CTTAGAAAGAGGTAGGTATGGCTGCTTTGTCGGTTGAAAGTTAAGGGGAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp CTTCTAAGGACCCATCACAGGCAAGTGGAATTTCTCTATCCTGACTTCATTCCCCTCTCTGCTCATCTTTaGTATTTAACACGGCACCAA +
Preference number: 4 (lower is better)
Translates to: LLRTHHRQVEFLYPDFIPLSAHL*YLTRHQ
Trigger: TTGGTGCCGTGTTAAATAGCAAAGATGAGCAGAGAG...GGGAATGAAGTCAGGATAGAGAAATTCCACTTGCCTGTGATGGGTCCTTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp TTAGATCTATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTCCACAGATACTTACGTTTTaGATTTGGAGCAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: LDLFLSRPRPAEVPPLPPQILTF*IWSRGI
Trigger: GATACCTCTGCTCCAAATGCAAAACGTAAGTATCTG...TGGAGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAATAGATCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR GCA 90 bp TTTCCAACTCTATTCTATCAAGGCCCTGTCAGCACTAGCATGATACCACAGACTTCTCACAGGTGCCTATaGCATGTAAACAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: FPTLFYQGPVSTSMIPQTSHRCL*HVNSRN
Trigger: ATTCCTGCTGTTTACATGGCATAGGCACCTGTGAGA...AGTCTGTGGTATCATGCTAGTGCTGACAGGGCCTTGATAGAATAGAGTTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp TTTCCAACTCTATTCTATCAAGGCCCTGTCAGCACTAGCATGATACCACAGACTTTTCTTCCGAGTCTGTaGAACAAAATTCACCGGGAG +
Preference number: 4 (lower is better)
Translates to: FPTLFYQGPVSTSMIPQTFLPSL*NKIHRE
Trigger: CTCCCGGTGAATTTTGTTCCACAGACTCGGAAGAAA...AGTCTGTGGTATCATGCTAGTGCTGACAGGGCCTTGATAGAATAGAGTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp ATAGGACAGGGTCACTCCTTAGCTGATACTTCTAAGGACCCATCACAGGCAAGTCTTACGTTTTGCATTTaGAGCAGAGGTATCATAGGA +
Preference number: 4 (lower is better)
Translates to: IGQGHSLADTSKDPSQASLTFCI*SRGIIG
Trigger: TCCTATGATACCTCTGCTCCAAATGCAAAACGTAAG...ACTTGCCTGTGATGGGTCCTTAGAAGTATCAGCTAAGGAGTGACCCTGTCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp TTCATTGGAAACCTTTCCTCAATGAATACACAGTCATTGCAAAAACAACACCTCGCAGGAATGTCACCTTaGGTAGGCCCAGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: FIGNLSSMNTQSLQKQHLAGMSP*VGPGYG
Trigger: TCCATACCCTGGGCCTACCCAAGGTGACATTCCTGC...GAGGTGTTGTTTTTGCAATGACTGTGTATTCATTGAGGAAAGGTTTCCAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp ATGAATAGGTTCAATGTCTTCAACAATTATCGAGGTGGAAAGCCACCTCTGTGTTCTGGATCTGTGAGTTaGTTGCCATGCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: MNRFNVFNNYRGGKPPLCSGSVS*LPCHTP
Trigger: AGGAGTGTGGCATGGCAACCAACTCACAGATCCAGA...ACACAGAGGTGGCTTTCCACCTCGATAATTGTTGAAGACATTGAACCTATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR CCA 90 bp CCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTAATCGATCCCTCTCAACTCTaGATCTGTGAGTTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: PDEILRSMSSVYKMLAVIDPSQL*ICELVA
Trigger: GGCAACCAACTCACAGATCCAGAGTTGAGAGGGATC...GATTACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp GATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAACCATGTTCCTTTGTTCTCTaGAAGACAGCCTTTGGATCT +
Preference number: 4 (lower is better)
Translates to: DLGGGDFGRSLSISSVQPCSFVL*KTAFGS
Trigger: AGATCCAAAGGCTGTCTTTCAGAGAACAAAGGAACA...TGGTTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp TTCATTGGAAACCTTTCCTCAATGAATACACAGTCATTGCAAAAACAACACCTCACCAGACAGTGTGTGTaGCAACTGCAAGCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: FIGNLSSMNTQSLQKQHLTRQCV*QLQARL
Trigger: GAGCCTTGCTTGCAGTTGTCACACACACTGTCTGGT...GAGGTGTTGTTTTTGCAATGACTGTGTATTCATTGAGGAAAGGTTTCCAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp ATGGCTCCCCTTAACTTTCAACCGACAAAGCAGCCATACCTACCTCTTTCTAAGGAAGATGAAGCTACTTaGGTTGTTCCATTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: MAPLNFQPTKQPYLPLSKEDEAT*VVPFCS
Trigger: TGAACAGAATGGAACAACTCAAGTAGCTTCATCTTC...CTTAGAAAGAGGTAGGTATGGCTGCTTTGTCGGTTGAAAGTTAAGGGGAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp ATGAATAGGTTCAATGTCTTCAACAATTATCGAGGTGGAAAGCCACCTCTGTGTCTGTCAGCACTAGCATaGTACCACAGACTGGATCTT +
Preference number: 4 (lower is better)
Translates to: MNRFNVFNNYRGGKPPLCLSALA*YHRLDL
Trigger: AAGATCCAGTCTGTGGTATCATGCTAGTGCTGACAG...ACACAGAGGTGGCTTTCCACCTCGATAATTGTTGAAGACATTGAACCTATTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAAGACCGTATTACATTCTaGCTGCCATCATCACAATTC +
Preference number: 4 (lower is better)
Translates to: DEIVTLISQVPMPCKQQEDRITF*LPSSQF
Trigger: GAATTGTGATGATGGCAGTCAGAATGTAATACGGTC...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp TACTTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATTCTCACTTCCCAGGTTaGCACCTTGACCTCTCACAC +
Preference number: 4 (lower is better)
Translates to: YLSCSILFTHITKGRIIHSHFPG*HLDLSH
Trigger: GTGTGAGAGGTCAAGGTGTCAACCTGGGAAGTGAGA...ATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp ATAGGACAGGGTCACTCCTTAGCTGATACTTCTAAGGACCCATCACAGGCAAGTGAGAACTCATCAAAGTaGGAAAAAGCACAGATAGAT +
Preference number: 4 (lower is better)
Translates to: IGQGHSLADTSKDPSQASENSSK*EKAQID
Trigger: ATCTATCTGTGCTTTTTCTCACTTTGATGAGTTCTC...ACTTGCCTGTGATGGGTCCTTAGAAGTATCAGCTAAGGAGTGACCCTGTCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp TACTTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATAGGCGGAGGTTGCAGTaGGCCAAGATCTTATCACTG +
Preference number: 4 (lower is better)
Translates to: YLSCSILFTHITKGRIIHRRRLQ*AKILSL
Trigger: CAGTGATAAGATCTTGGCTCACTGCAACCTCCGCCT...ATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp CAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTCTCACTAGCACTGAAATAGGATaGATATGTTTCTGCATTGTA +
Preference number: 4 (lower is better)
Translates to: QLWICELVAMPHSCLILTSTEIG*ICFCIV
Trigger: TACAATGCAGAAACATATGCATCCTATTTCAGTGCT...AGTGAGAATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCCTAAGAAAGACCTTCTaGATAAGCAAAGGTTTATGT +
Preference number: 4 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWILRKTF*ISKGLC
Trigger: ACATAAACCTTTGCTTATGCAGAAGGTCTTTCTTAG...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCATCAGAACAAAATTGTaGTTTGAGGTTTTGTCCACT +
Preference number: 4 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWIIRTKL*FEVLST
Trigger: AGTGGACAAAACCTCAAAGCACAATTTTGTTCTGAT...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp TTTCCAACTCTATTCTATCAAGGCCCTGTCAGCACTAGCATGATACCACAGACTCACATTTTCCCCCATTaGATAGATGAATGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: FPTLFYQGPVSTSMIPQTHIFPH*IDEWLA
Trigger: TGCAAGCCATTCATCTATCCAATGGGGGAAAATGTG...AGTCTGTGGTATCATGCTAGTGCTGACAGGGCCTTGATAGAATAGAGTTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp GAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAACCAGTCAAGTAGGTGGGTGTTAGTTCTCTaGTGTCAAAGGCTTCTATAT +
Preference number: 4 (lower is better)
Translates to: EAILVEVSQFLLYNQSSRWVLVL*CQRLLY
Trigger: ATATAGAAGCCTTTGACATCAGAGAACTAACACCCA...CCTACTTGACTGGTTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp GATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAACCAAAGGTTAGAGGAGGATaGATAGGTTCAATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: DLGGGDFGRSLSISSVQPKVRGG*IGSMSS
Trigger: TGAAGACATTGAACCTATTCATCCTCCTCTAACCTT...TGGTTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR TCA 90 bp TTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATTTAACCAGACAGTGTGTGTaGCAACTGCAAGCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: LSCSILFTHITKGRIIHLTRQCV*QLQARL
Trigger: GAGCCTTGCTTGCAGTTGTCACACACACTGTCTGGT...TAAATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
CDS-3UTR TCA 90 bp ATCCCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTAGCTGTATCCTTAAGTTaGGGGTTTTCCGTAGTTGGT +
Preference number: 4 (lower is better)
Translates to: IPDEILRSMSSVYKMLAVAVSLS*GFSVVG
Trigger: ACCAACTACGGAAAACCCTCAACTTAAGGATACAGC...TACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp ATGGCTCCCCTTAACTTTCAACCGACAAAGCAGCCATACCTACCTCTTTCTAAGTCCTTATCTTCAAACTaGGTCTTTGGTGGATGTAAT +
Preference number: 4 (lower is better)
Translates to: MAPLNFQPTKQPYLPLSKSLSSN*VFGGCN
Trigger: ATTACATCCACCAAAGACTCAGTTTGAAGATAAGGA...CTTAGAAAGAGGTAGGTATGGCTGCTTTGTCGGTTGAAAGTTAAGGGGAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp AAGTTAGATCTATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTTACCTCTTTCTAAGATaGAATTGTGACACTGATCTC +
Preference number: 4 (lower is better)
Translates to: KLDLFLSRPRPAEVPPLPYLFLR*NCDTDL
Trigger: GAGATCAGTGTCACAATTTCATCTTAGAAAGAGGTA...AGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAATAGATCTAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAAAATGCTAGTCACACATaGACCCTAAGATTACAGGAT +
Preference number: 4 (lower is better)
Translates to: DEIVTLISQVPMPCKQQENASHT*TLRLQD
Trigger: ATCCTGTAATCTTAGGGTTCATGTGTGACTAGCATT...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp CTGCAAGCAAGGCTCGCTAAGACATTCTTGCAGCTCAGAGAAATTAAAGCAAAGTGGTATTTCCAGAAATaGAGTCTTCAATGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LQARLAKTFLQLREIKAKWYFQK*SLQWSQ
Trigger: CTGACTCCATTGAAGACTTCATTTCTGGAAATACCA...CTTTGCTTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAGCCTTGCTTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp TTTCCAACTCTATTCTATCAAGGCCCTGTCAGCACTAGCATGATACCACAGACTAAGTCCACACCACAGTaGTATCTAGCACATGAATAT +
Preference number: 4 (lower is better)
Translates to: FPTLFYQGPVSTSMIPQTKSTPQ*YLAHEY
Trigger: ATATTCATGTGCTAGATAGCACTGTGGTGTGGACTT...AGTCTGTGGTATCATGCTAGTGCTGACAGGGCCTTGATAGAATAGAGTTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp AGAGAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCACAGAGCAGAACTGCTaGAGTAGTGATCCCTCTCAA +
Preference number: 4 (lower is better)
Translates to: REIKAKCKLEVSSKVKSPTEQNC*SSDPSQ
Trigger: TTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGT...GGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp ATAGGACAGGGTCACTCCTTAGCTGATACTTCTAAGGACCCATCACAGGCAAGTTTTTCTTCATCCTGTTaGATTTTCTCTACTTGCCTT +
Preference number: 4 (lower is better)
Translates to: IGQGHSLADTSKDPSQASFSSSC*IFSTCL
Trigger: AAGGCAAGTAGAGAAAATGCAACAGGATGAAGAAAA...ACTTGCCTGTGATGGGTCCTTAGAAGTATCAGCTAAGGAGTGACCCTGTCCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR CCA 90 bp ATCCCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTATTTCTTCCGAGTCTGTaGAACAAAATTCACCGGGAG +
Preference number: 4 (lower is better)
Translates to: IPDEILRSMSSVYKMLAVFLPSL*NKIHRE
Trigger: CTCCCGGTGAATTTTGTTCCACAGACTCGGAAGAAA...TACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626212.2
ENST00000628452.2
CDS-3UTR CCA 90 bp TTTCCAACTCTATTCTATCAAGGCCCTGTCAGCACTAGCATGATACCACAGACTCTTACGTTTTGCATTTaGAGCAGAGGTATCATAGGA +
Preference number: 4 (lower is better)
Translates to: FPTLFYQGPVSTSMIPQTLTFCI*SRGIIG
Trigger: TCCTATGATACCTCTGCTCCAAATGCAAAACGTAAG...AGTCTGTGGTATCATGCTAGTGCTGACAGGGCCTTGATAGAATAGAGTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp TTAAGGTACCCACCACAATACATAAACTATAAAGTGACAGCTAATTCCACAAGAGGTAGGCCCAGGGTATaGAACGTAATAGAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LRYPPQYINYKVTANSTRGRPRV*NVIESP
Trigger: AGGGCTCTCTATTACGTTCCATACCCTGGGCCTACC...TCTTGTGGAATTAGCTGTCACTTTATAGTTTATGTATTGTGGTGGGTACCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp ATCCCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTAAGCATATCACTGACCTaGCCTCAGAATAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: IPDEILRSMSSVYKMLAVSISLT*PQNKGD
Trigger: ATCTCCCTTATTCTGAGGCCAGGTCAGTGATATGCT...TACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR CCA 90 bp CCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTAATCAATACTAAAATTAGCTaGGTGTGGTGGTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: PDEILRSMSSVYKMLAVINTKIS*VWWWAP
Trigger: AGGTGCCCACCACCACACCCAGCTAATTTTAGTATT...GATTACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp ATCCCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTACTTGTCAATCTCCAGTaGACTCTTATCCAACCTTTC +
Preference number: 4 (lower is better)
Translates to: IPDEILRSMSSVYKMLAVLVNLQ*TLIQPF
Trigger: GAAAGGTTGGATAAGAGTTCACTGGAGATTGACAAG...TACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626212.2
ENST00000628452.2
CDS-3UTR TCA 90 bp TTAGATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAACCAGAGAAAAATAAATaGTCGAGGTGCTGCAATCTC +
Preference number: 4 (lower is better)
Translates to: LDLGGGDFGRSLSISSVQPEKNK*SRCCNL
Trigger: GAGATTGCAGCACCTCGATCATTTATTTTTCTCTGG...TTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR TCA 90 bp TACTTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATCTGTCAGCACTAGCATaGTACCACAGACTGGATCTT +
Preference number: 4 (lower is better)
Translates to: YLSCSILFTHITKGRIIHLSALA*YHRLDL
Trigger: AAGATCCAGTCTGTGGTATCATGCTAGTGCTGACAG...ATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp GATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAACCAGTACAGCAAGAGAAGTaGCAGCATAAAGTCTTATAT +
Preference number: 4 (lower is better)
Translates to: DLGGGDFGRSLSISSVQPVQQEK*QHKVLY
Trigger: ATATAAGACTTTATGCTGTCACTTCTCTTGCTGTAC...TGGTTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp TTAGATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAAGGAATTTCTCTATCCTaGCTTCATTCCCAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: LDLGGGDFGRSLSISSVQGISLS*LHSQVN
Trigger: ATTGACCTGGGAATGAAGTCAGGATAGAGAAATTCC...TTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp TTAGATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAAACAATTAGCTGGAGCTaGCAAGTGATGTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: LDLGGGDFGRSLSISSVQTISWS*QVMSTL
Trigger: TAAAGTGGACATCACTTGTCAGCTCCAGCTAATTGT...TTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp TTAAGGTACCCACCACAATACATAAACTATAAAGTGACAGCTAATTCCACAAGACTCTTCTCTCTGTGGTaGCAATTAGCTGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: LRYPPQYINYKVTANSTRLFSLW*QLAGAD
Trigger: GTCAGCTCCAGCTAATTGTCACCACAGAGAGAAGAG...TCTTGTGGAATTAGCTGTCACTTTATAGTTTATGTATTGTGGTGGGTACCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp TACTTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATCCAGCCTTTGTTCTCTaGAAGACAGCCTTTGGATCT +
Preference number: 4 (lower is better)
Translates to: YLSCSILFTHITKGRIIHPAFVL*KTAFGS
Trigger: AGATCCAAAGGCTGTCTTTCAGAGAACAAAGGCTGG...ATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506780.2
CDS-3UTR GCA 90 bp ATCCCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTACTCTCTGCTCATCTTTaGTATTTAACACGGCACCAA +
Preference number: 4 (lower is better)
Translates to: IPDEILRSMSSVYKMLAVLSAHL*YLTRHQ
Trigger: TTGGTGCCGTGTTAAATAGCAAAGATGAGCAGAGAG...TACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626212.2
ENST00000628452.2
CDS-3UTR GCA 90 bp ATGGCTCCCCTTAACTTTCAACCGACAAAGCAGCCATACCTACCTCTTTCTAAGAGCACTGAAATAGGATaGATATGTTTCTGCATTGTA +
Preference number: 4 (lower is better)
Translates to: MAPLNFQPTKQPYLPLSKSTEIG*ICFCIV
Trigger: TACAATGCAGAAACATATGCATCCTATTTCAGTGCT...CTTAGAAAGAGGTAGGTATGGCTGCTTTGTCGGTTGAAAGTTAAGGGGAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp CTGCAAGCAAGGCTCGCTAAGACATTCTTGCAGCTCAGAGAAATTAAAGCAAAGGAAATTAAAGCAAAGTaGAAGCTGGAAGTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LQARLAKTFLQLREIKAKEIKAK*KLEVSS
Trigger: AGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC...CTTTGCTTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAGCCTTGCTTGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
CDS-3UTR GCA 90 bp TTTCCAACTCTATTCTATCAAGGCCCTGTCAGCACTAGCATGATACCACAGACTGAAATTAAAGCAAAGTaGAAGCTGGAAGTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: FPTLFYQGPVSTSMIPQTEIKAK*KLEVSS
Trigger: AGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC...AGTCTGTGGTATCATGCTAGTGCTGACAGGGCCTTGATAGAATAGAGTTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp TTCATTGGAAACCTTTCCTCAATGAATACACAGTCATTGCAAAAACAACACCTCAGTGTGTGTGACAACTaGAAGCAAGGCTCGCTAAGA +
Preference number: 4 (lower is better)
Translates to: FIGNLSSMNTQSLQKQHLSVCDN*KQGSLR
Trigger: TCTTAGCGAGCCTTGCTTGCAGTTGTCACACACACT...GAGGTGTTGTTTTTGCAATGACTGTGTATTCATTGAGGAAAGGTTTCCAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp TACTTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATAGTGTGTGTGACAACTaGAAGCAAGGCTCGCTAAGA +
Preference number: 4 (lower is better)
Translates to: YLSCSILFTHITKGRIIHSVCDN*KQGSLR
Trigger: TCTTAGCGAGCCTTGCTTGCAGTTGTCACACACACT...ATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
CDS-3UTR GCA 90 bp ATGAATAGGTTCAATGTCTTCAACAATTATCGAGGTGGAAAGCCACCTCTGTGTAGGCATGAGCCACCATaGCCAGCATTTCTAAATAAT +
Preference number: 4 (lower is better)
Translates to: MNRFNVFNNYRGGKPPLCRHEPP*PAFLNN
Trigger: ATTATTTAGAAATGCTGGGCATGGTGGCTCATGCCT...ACACAGAGGTGGCTTTCCACCTCGATAATTGTTGAAGACATTGAACCTATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR GCA 90 bp TACTTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATGTAACAGAGCAGAACTaGTGCAGTAGTGATCCCTCT +
Preference number: 4 (lower is better)
Translates to: YLSCSILFTHITKGRIIHVTEQN*CSSDPS
Trigger: AGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTAC...ATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp GAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCACTAACTGTGAGCCAGCCTaGTCGAATTGTACTATCTCT +
Preference number: 4 (lower is better)
Translates to: EIKAKCKLEVSSKVKSPTNCEPA*SNCTIS
Trigger: AGAGATAGTACAATTCGACCAGGCTGGCTCACAGTT...AGTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp CTGCAAGCAAGGCTCGCTAAGACATTCTTGCAGCTCAGAGAAATTAAAGCAAAGAAATATGGTAGATCATaGCTCCCCTTAACTTTCAAC +
Preference number: 4 (lower is better)
Translates to: LQARLAKTFLQLREIKAKKYGRS*LPLTFN
Trigger: GTTGAAAGTTAAGGGGAGCCATGATCTACCATATTT...CTTTGCTTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAGCCTTGCTTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp CTGCAAGCAAGGCTCGCTAAGACATTCTTGCAGCTCAGAGAAATTAAAGCAAAGGGAAAAAGGGTTTACTaGAAAAGGATGTCCCAATTA +
Preference number: 4 (lower is better)
Translates to: LQARLAKTFLQLREIKAKGKRVY*KRMSQL
Trigger: TAATTGGGACATCCTTTTCCAGTAAACCCTTTTTCC...CTTTGCTTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAGCCTTGCTTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp GAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCACTTGTTCCTTTGTTCTCTaGAAGACAGCCTTTGGATCT +
Preference number: 4 (lower is better)
Translates to: EIKAKCKLEVSSKVKSPTCSFVL*KTAFGS
Trigger: AGATCCAAAGGCTGTCTTTCAGAGAACAAAGGAACA...AGTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp AGAGAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCAGTGCAAGCTGGAAGTaGGTTCTAAAGTTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: REIKAKCKLEVSSKVKSPSASWK*VLKLSL
Trigger: GAGACTTAACTTTAGAACTCACTTCCAGCTTGCACT...GGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
CDS-3UTR TCA 90 bp ATGAATAGGTTCAATGTCTTCAACAATTATCGAGGTGGAAAGCCACCTCTGTGTGAAGATGAAGCTACTTaGGTTGTTCCATTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: MNRFNVFNNYRGGKPPLCEDEAT*VVPFCS
Trigger: TGAACAGAATGGAACAACTCAAGTAGCTTCATCTTC...ACACAGAGGTGGCTTTCCACCTCGATAATTGTTGAAGACATTGAACCTATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR TCA 90 bp ATGAATAGGTTCAATGTCTTCAACAATTATCGAGGTGGAAAGCCACCTCTGTGTTGGTATTTCCAGAAATaGAGTCTTCAATGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: MNRFNVFNNYRGGKPPLCWYFQK*SLQWSQ
Trigger: CTGACTCCATTGAAGACTTCATTTCTGGAAATACCA...ACACAGAGGTGGCTTTCCACCTCGATAATTGTTGAAGACATTGAACCTATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp TTAAGGTACCCACCACAATACATAAACTATAAAGTGACAGCTAATTCCACAAGACCCCCATTGGATAGATaGATGGCTTGCAATGACATC +
Preference number: 4 (lower is better)
Translates to: LRYPPQYINYKVTANSTRPPLDR*MACNDI
Trigger: GATGTCATTGCAAGCCATTCATCTATCCAATGGGGG...TCTTGTGGAATTAGCTGTCACTTTATAGTTTATGTATTGTGGTGGGTACCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp CCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTAATCTATCATAGGAAGCCCTaGAAGTTTCTCTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: PDEILRSMSSVYKMLAVIYHRKP*KFLLFQ
Trigger: CTGAAACAAGAGAAACTTGCAGGGCTTCCTATGATA...GATTACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626212.2
ENST00000628452.2
CDS-3UTR GCA 90 bp CTGCAAGCAAGGCTCGCTAAGACATTCTTGCAGCTCAGAGAAATTAAAGCAAAGAGCACTGAAATAGGATaGATATGTTTCTGCATTGTA +
Preference number: 4 (lower is better)
Translates to: LQARLAKTFLQLREIKAKSTEIG*ICFCIV
Trigger: TACAATGCAGAAACATATGCATCCTATTTCAGTGCT...CTTTGCTTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAGCCTTGCTTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
CDS-3UTR GCA 90 bp TACTTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATACATCATCAACTACCTaGCCTCTTCTTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: YLSCSILFTHITKGRIIHTSSTT*PLLSPQ
Trigger: CTGTGGAGAAAGAAGAGGGCAGGTAGTTGATGATGT...ATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp ATCCCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTATCTAGTTCATCGTTTTaGATTTGGAGCAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: IPDEILRSMSSVYKMLAVSSSSF*IWSRGI
Trigger: GATACCTCTGCTCCAAATGCAAAACGATGAACTAGA...TACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626212.2
CDS-3UTR CCA 90 bp TTAAGGTACCCACCACAATACATAAACTATAAAGTGACAGCTAATTCCACAAGAGGGAGGAGGCGATTTTaGTCGAAGTCTCTCAATTTC +
Preference number: 4 (lower is better)
Translates to: LRYPPQYINYKVTANSTRGRRRF*SKSLNF
Trigger: GAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCC...TCTTGTGGAATTAGCTGTCACTTTATAGTTTATGTATTGTGGTGGGTACCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp TACTTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATCCCATCACAGGCAAGTaGAATTTCTCTATCCTGACT +
Preference number: 4 (lower is better)
Translates to: YLSCSILFTHITKGRIIHPITGK*NFSILT
Trigger: AGTCAGGATAGAGAAATTCCACTTGCCTGTGATGGG...ATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp TTCATTGGAAACCTTTCCTCAATGAATACACAGTCATTGCAAAAACAACACCTCAATACTAAAATTAGCTaGGTGTGGTGGTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: FIGNLSSMNTQSLQKQHLNTKIS*VWWWAP
Trigger: AGGTGCCCACCACCACACCCAGCTAATTTTAGTATT...GAGGTGTTGTTTTTGCAATGACTGTGTATTCATTGAGGAAAGGTTTCCAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp AGAGAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCTTTAAATATGCATGTTaGCCAGTTGCAGAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: REIKAKCKLEVSSKVKSPFKYAC*PVAEAH
Trigger: GTGAGCCTCTGCAACTGGCCAACATGCATATTTAAA...GGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAACATTGGATAGATGAATaGCTTGCAATGACATCATTA +
Preference number: 4 (lower is better)
Translates to: DEIVTLISQVPMPCKQQEHWIDE*LAMTSL
Trigger: TAATGATGTCATTGCAAGCCATTCATCTATCCAATG...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp GATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAACCACATTGGATAGATGAATaGCTTGCAATGACATCATTA +
Preference number: 4 (lower is better)
Translates to: DLGGGDFGRSLSISSVQPHWIDE*LAMTSL
Trigger: TAATGATGTCATTGCAAGCCATTCATCTATCCAATG...TGGTTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR CCA 90 bp GAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCACTCACATTTTCCCCCATTaGATAGATGAATGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: EIKAKCKLEVSSKVKSPTHIFPH*IDEWLA
Trigger: TGCAAGCCATTCATCTATCCAATGGGGGAAAATGTG...AGTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp CCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTAATCTCATCGTTTTGCATTTaGAGCAGAGGTATCATAGGA +
Preference number: 4 (lower is better)
Translates to: PDEILRSMSSVYKMLAVISSFCI*SRGIIG
Trigger: TCCTATGATACCTCTGCTCCAAATGCAAAACGATGA...GATTACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626212.2
CDS-3UTR TCA 90 bp TTCATTGGAAACCTTTCCTCAATGAATACACAGTCATTGCAAAAACAACACCTCGGAATTTCTCTATCCTaGCTTCATTCCCAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: FIGNLSSMNTQSLQKQHLGISLS*LHSQVN
Trigger: ATTGACCTGGGAATGAAGTCAGGATAGAGAAATTCC...GAGGTGTTGTTTTTGCAATGACTGTGTATTCATTGAGGAAAGGTTTCCAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp GAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCACTTATCATAGGAAGCCCTaGAAGTTTCTCTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: EIKAKCKLEVSSKVKSPTYHRKP*KFLLFQ
Trigger: CTGAAACAAGAGAAACTTGCAGGGCTTCCTATGATA...AGTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp TTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATTTATTTCTTCCGAGTCTGTaGAACAAAATTCACCGGGAG +
Preference number: 4 (lower is better)
Translates to: LSCSILFTHITKGRIIHLFLPSL*NKIHRE
Trigger: CTCCCGGTGAATTTTGTTCCACAGACTCGGAAGAAA...TAAATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CCA 90 bp TTAGATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAAAAATATGGTAGATCATaGCTCCCCTTAACTTTCAAC +
Preference number: 4 (lower is better)
Translates to: LDLGGGDFGRSLSISSVQKYGRS*LPLTFN
Trigger: GTTGAAAGTTAAGGGGAGCCATGATCTACCATATTT...TTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR CCA 90 bp ATGAATAGGTTCAATGTCTTCAACAATTATCGAGGTGGAAAGCCACCTCTGTGTGGAAAAAGGGTTTACTaGAAAAGGATGTCCCAATTA +
Preference number: 4 (lower is better)
Translates to: MNRFNVFNNYRGGKPPLCGKRVY*KRMSQL
Trigger: TAATTGGGACATCCTTTTCCAGTAAACCCTTTTTCC...ACACAGAGGTGGCTTTCCACCTCGATAATTGTTGAAGACATTGAACCTATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR TCA 90 bp TTAAGGTACCCACCACAATACATAAACTATAAAGTGACAGCTAATTCCACAAGACTTGTCAATCTCCAGTaGACTCTTATCCAACCTTTC +
Preference number: 4 (lower is better)
Translates to: LRYPPQYINYKVTANSTRLVNLQ*TLIQPF
Trigger: GAAAGGTTGGATAAGAGTTCACTGGAGATTGACAAG...TCTTGTGGAATTAGCTGTCACTTTATAGTTTATGTATTGTGGTGGGTACCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp TTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATTTACCAGAGAAAAATAAATaGTCGAGGTGCTGCAATCTC +
Preference number: 4 (lower is better)
Translates to: LSCSILFTHITKGRIIHLPEKNK*SRCCNL
Trigger: GAGATTGCAGCACCTCGATCATTTATTTTTCTCTGG...TAAATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
CDS-3UTR TCA 90 bp TTAAGGTACCCACCACAATACATAAACTATAAAGTGACAGCTAATTCCACAAGAAGTGCAAGCTGGAAGTaGGTTCTAAAGTTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LRYPPQYINYKVTANSTRSASWK*VLKLSL
Trigger: GAGACTTAACTTTAGAACTCACTTCCAGCTTGCACT...TCTTGTGGAATTAGCTGTCACTTTATAGTTTATGTATTGTGGTGGGTACCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp AGAGAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCTCCTTATCTTCAAACTaGGTCTTTGGTGGATGTAAT +
Preference number: 4 (lower is better)
Translates to: REIKAKCKLEVSSKVKSPSLSSN*VFGGCN
Trigger: ATTACATCCACCAAAGACTCAGTTTGAAGATAAGGA...GGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp TACTTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATTATCATAGGAAGCCCTaGAAGTTTCTCTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: YLSCSILFTHITKGRIIHYHRKP*KFLLFQ
Trigger: CTGAAACAAGAGAAACTTGCAGGGCTTCCTATGATA...ATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp TACTTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATCAGATACTTACGTTTTaGATTTGGAGCAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: YLSCSILFTHITKGRIIHQILTF*IWSRGI
Trigger: GATACCTCTGCTCCAAATGCAAAACGTAAGTATCTG...ATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp GAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCACTGAAATTAAAGCAAAGTaGAAGCTGGAAGTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: EIKAKCKLEVSSKVKSPTEIKAK*KLEVSS
Trigger: AGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC...AGTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
CDS-3UTR GCA 90 bp TTAGATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAAGGTAGTTTTTCTCTGTaGATTACAGCTAGCAATATT +
Preference number: 4 (lower is better)
Translates to: LDLGGGDFGRSLSISSVQGSFSL*ITASNI
Trigger: AATATTGCTAGCTGTAATGCACAGAGAAAAACTACC...TTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR GCA 90 bp TTAAGGTACCCACCACAATACATAAACTATAAAGTGACAGCTAATTCCACAAGATCTTCTCTCTATAGTTaGTATGGCCTGAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: LRYPPQYINYKVTANSTRSSLYS*YGLRPR
Trigger: TCTTGGTCTCAGGCCATAGCAACTATAGAGAGAAGA...TCTTGTGGAATTAGCTGTCACTTTATAGTTTATGTATTGTGGTGGGTACCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp TTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATTTAAAGGTTAGAGGAGGATaGATAGGTTCAATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSCSILFTHITKGRIIHLKVRGG*IGSMSS
Trigger: TGAAGACATTGAACCTATTCATCCTCCTCTAACCTT...TAAATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
CDS-3UTR TCA 90 bp TTCATTGGAAACCTTTCCTCAATGAATACACAGTCATTGCAAAAACAACACCTCGAAACCTTTCCTCAATaGATACACAGTCATTGCAAA +
Preference number: 4 (lower is better)
Translates to: FIGNLSSMNTQSLQKQHLETFPQ*IHSHCK
Trigger: TTTGCAATGACTGTGTATTCATTGAGGAAAGGTTTC...GAGGTGTTGTTTTTGCAATGACTGTGTATTCATTGAGGAAAGGTTTCCAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp TTCATTGGAAACCTTTCCTCAATGAATACACAGTCATTGCAAAAACAACACCTCATATTTGTCCTCCTTTaGTTCTTAGGAAGCGTGATT +
Preference number: 4 (lower is better)
Translates to: FIGNLSSMNTQSLQKQHLIFVLL*FLGSVI
Trigger: AATCACGCTTCCTAAGAAGCAAAGGAGGACAAATAT...GAGGTGTTGTTTTTGCAATGACTGTGTATTCATTGAGGAAAGGTTTCCAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp TTAAGGTACCCACCACAATACATAAACTATAAAGTGACAGCTAATTCCACAAGAAAGTCCACACCACAGTaGTATCTAGCACATGAATAT +
Preference number: 4 (lower is better)
Translates to: LRYPPQYINYKVTANSTRKSTPQ*YLAHEY
Trigger: ATATTCATGTGCTAGATAGCACTGTGGTGTGGACTT...TCTTGTGGAATTAGCTGTCACTTTATAGTTTATGTATTGTGGTGGGTACCTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp GAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCACTGGTAGTTTTTCTCTGTaGATTACAGCTAGCAATATT +
Preference number: 4 (lower is better)
Translates to: EIKAKCKLEVSSKVKSPTGSFSL*ITASNI
Trigger: AATATTGCTAGCTGTAATGCACAGAGAAAAACTACC...AGTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp AGAGAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCATCAGAACAAAATTGTaGTTTGAGGTTTTGTCCACT +
Preference number: 4 (lower is better)
Translates to: REIKAKCKLEVSSKVKSPIRTKL*FEVLST
Trigger: AGTGGACAAAACCTCAAAGCACAATTTTGTTCTGAT...GGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR TCA 90 bp TTAAGGTACCCACCACAATACATAAACTATAAAGTGACAGCTAATTCCACAAGAGAAACCTTTCCTCAATaGATACACAGTCATTGCAAA +
Preference number: 4 (lower is better)
Translates to: LRYPPQYINYKVTANSTRETFPQ*IHSHCK
Trigger: TTTGCAATGACTGTGTATTCATTGAGGAAAGGTTTC...TCTTGTGGAATTAGCTGTCACTTTATAGTTTATGTATTGTGGTGGGTACCTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR GCA 90 bp TTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATTTAATATTTGTCCTCCTTTaGTTCTTAGGAAGCGTGATT +
Preference number: 4 (lower is better)
Translates to: LSCSILFTHITKGRIIHLIFVLL*FLGSVI
Trigger: AATCACGCTTCCTAAGAAGCAAAGGAGGACAAATAT...TAAATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR CAA 72 bp CAATTGCAGTTCCAATTTCCAAGCTGTATCCTTAAGTaGAGGGTTTTCCGTAGTTGGTTTTACATTAAACTA +
Preference number: 4 (lower is better)
Translates to: QLQFQFPSCILK*RVFRSWFYIKL
Trigger: TAGTTTAATGTAAAACCAACTACGGAAAACCCTCAACTTAAGGATACAGCTTGGAAATTGGAACTGCAATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR CAA 72 bp GCCATCATCACAATTCTGTGGTCTAATCTGATTCATTaGTGTTTAGGTATGGTATTCCACACCATAAAATCT +
Preference number: 4 (lower is better)
Translates to: AIITILWSNLIH*CLGMVFHTIKS
Trigger: AGATTTTATGGTGTGGAATACCATACCTAAACACAAATGAATCAGATTAGACCACAGAATTGTGATGATGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
3UTR CAA 72 bp GTGCCTAAAGAAGACAATTATCCCATTAAAAAGTTCTaGGCCTGCTTCTCTATTAATATAGAGTCCCATATG +
Preference number: 4 (lower is better)
Translates to: VPKEDNYPIKKF*ACFSINIESHM
Trigger: CATATGGGACTCTATATTAATAGAGAAGCAGGCCAAGAACTTTTTAATGGGATAATTGTCTTCTTTAGGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS GCA 90 bp TGCGCGAGGAGCTGTCGCCGTAACTTCTGCCGCTCCCGGATCTCCTaGAAGCGGCTATCCATGTTCCAACTCCGGCTTTTCACTATCCCG +
Preference number: 5 (lower is better)
Translates to: CARSCRRNFCRSRIS*KRLSMFQLRLFTIP
Trigger: CGGGATAGTGAAAAGCCGGAGTTGGAACATGGATAGCCGCTTGCAGGAGATCCGGGAGCGGCAGAAGTTACGGCGACAGCTCCTCGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388822.10
ENST00000508801.1
ENST00000626212.2
ENST00000628452.2
CDS GCA 90 bp CTTTCAGCTCCCAACTGCTGCGCGAGGAGCTGTCGCCGTAACTTCTaGCGCTCCCGGATCTCCTGCAAGCGGCTATCCATGTTCCAACTC +
Preference number: 5 (lower is better)
Translates to: LSAPNCCARSCRRNF*RSRISCKRLSMFQL
Trigger: GAGTTGGAACATGGATAGCCGCTTGCAGGAGATCCGGGAGCGGCAGAAGTTACGGCGACAGCTCCTCGCGCAGCAGTTGGGAGCTGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000626212.2
ENST00000628452.2
CDS GCA 90 bp CATATTCCACAAATCTGCTGCGCGAGGAGCTGTCGCCGTAACTTCTaGCGCTCCCGGATCTCCTGCAAGCGGCTATCCATGTTCCAACTC +
Preference number: 5 (lower is better)
Translates to: HIPQICCARSCRRNF*RSRISCKRLSMFQL
Trigger: GAGTTGGAACATGGATAGCCGCTTGCAGGAGATCCGGGAGCGGCAGAAGTTACGGCGACAGCTCCTCGCGCAGCAGATTTGTGGAATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508801.1
CDS-3UTR CAA 90 bp ATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTCCACCTCTGGGTGTAATCCTGACACTTaGGGAGGCCAGGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: ISFSSTASRSSTSSSTSGCNPDT*GGQGGW
Trigger: CCACCCACCCTGGCCTCCCAAAGTGTCAGGATTACA...CCCAGAGGTGGAGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS GCA 90 bp CTGACTCCAAGTTTCCACGGTTTTAGCCATATTCCACAAATCTGCTaGGCGAGGAGCTGTCGCCGTAACTTCTGCCGCTCCCGGATCTCC +
Preference number: 5 (lower is better)
Translates to: LTPSFHGFSHIPQIC*ARSCRRNFCRSRIS
Trigger: GGAGATCCGGGAGCGGCAGAAGTTACGGCGACAGCTCCTCGCGCAGCAGATTTGTGGAATATGGCTAAAACCGTGGAAACTTGGAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508801.1
CDS GCA 90 bp AATCTGACTCCAAGTTTCCACGGTTTTAGCCATATTCCACAAATCTaGTGCGCGAGGAGCTGTCGCCGTAACTTCTGCCGCTCCCGGATC +
Preference number: 5 (lower is better)
Translates to: NLTPSFHGFSHIPQI*CARSCRRNFCRSRI
Trigger: GATCCGGGAGCGGCAGAAGTTACGGCGACAGCTCCTCGCGCAGCAGATTTGTGGAATATGGCTAAAACCGTGGAAACTTGGAGTCAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508801.1
CDS-3UTR CAA 90 bp TTAGATCTATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTCCAAGCAGGAATGTCACCTaGGGTAGGCCCAGGGTATGG +
Preference number: 5 (lower is better)
Translates to: LDLFLSRPRPAEVPPLPPSRNVT*GRPRVW
Trigger: CCATACCCTGGGCCTACCCAAGGTGACATTCCTGCT...TGGAGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAATAGATCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR CAA 90 bp CCCTCTCAACTCTGGATCTGTGAGTTGGTTGCCATGCCACACTCCTGCTTGATTATGCCACACTCCTGCTaGATTCTCACTTCCCAGGTT +
Preference number: 5 (lower is better)
Translates to: PSQLWICELVAMPHSCLIMPHSC*ILTSQV
Trigger: AACCTGGGAAGTGAGAATCAAGCAGGAGTGTGGCAT...AATCAAGCAGGAGTGTGGCATGGCAACCAACTCACAGATCCAGAGTTGAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp CCTGAGACCAAGAGTCAGTGGCCATTTACTAACGCACTCTATGCTGCTCTGCTCTACTCAATCAGTACTTaGGGCCTCCTAATCCCCATC +
Preference number: 5 (lower is better)
Translates to: PETKSQWPFTNALYAALLYSIST*GLLIPI
Trigger: GATGGGGATTAGGAGGCCCAAAGTACTGATTGAGTA...GAGCAGAGCAGCATAGAGTGCGTTAGTAAATGGCCACTGACTCTTGGTCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCTGGGAGGAGGCGATTTaGGTCGAAGTCTCTCAATTT +
Preference number: 5 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWIWEEAI*VEVSQF
Trigger: AAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCA...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp GATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAACCATCCCAGGTTGACACCTaGACCTCTCACACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: DLGGGDFGRSLSISSVQPSQVDT*TSHTVL
Trigger: CAGCACAGTGTGAGAGGTCAAGGTGTCAACCTGGGA...TGGTTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR CAA 90 bp CTGCAAGCAAGGCTCGCTAAGACATTCTTGCAGCTCAGAGAAATTAAAGCAAAGGGATCTGTGAGTTGGTaGCCATGCCACACTCCTGCT +
Preference number: 5 (lower is better)
Translates to: LQARLAKTFLQLREIKAKGSVSW*PCHTPA
Trigger: AGCAGGAGTGTGGCATGGCAACCAACTCACAGATCC...CTTTGCTTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAGCCTTGCTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp ATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTCCACCTCTGGGAGAATCACATCAAATTaGGGTGTTAGTTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: ISFSSTASRSSTSSSTSGRITSN*GVSSLM
Trigger: CATCAGAGAACTAACACCCAAATTTGATGTGATTCT...CCCAGAGGTGGAGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CAA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAACGCTTCACAGTTCCTTaGATCCCCATGAGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: DEIVTLISQVPMPCKQQERFTVP*IPMRQC
Trigger: ACACTGCCTCATGGGGATCAAAGGAACTGTGAAGCG...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCGCCAGCCTGGTCGAATaGTACTATCTCTTCCAAATA +
Preference number: 5 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWIASLVE*YYLFQI
Trigger: TATTTGGAAGAGATAGTACAATTCGACCAGGCTGGC...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp TCCTCGGAAGTTAGATCTATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCAGCTGTATCCTTAAGTaGAGGGTTTTCCGTAGTTGG +
Preference number: 5 (lower is better)
Translates to: SSEVRSISFSSTASRSSTSCILK*RVFRSW
Trigger: CCAACTACGGAAAACCCTCAACTTAAGGATACAGCT...GGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAATAGATCTAACTTCCGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR CAA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCACTTACGTTTTGCATTaGGAGCAGAGGTATCATAGG +
Preference number: 5 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWITYVLH*EQRYHR
Trigger: CCTATGATACCTCTGCTCCAAATGCAAAACGTAAGT...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp AAGTTAGATCTATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTCGGTCAGATTTAGATTaGGGAGGAGGCGATTTTGGT +
Preference number: 5 (lower is better)
Translates to: KLDLFLSRPRPAEVPPLPRSDLD*GGGDFG
Trigger: ACCAAAATCGCCTCCTCCCAAATCTAAATCTGACCG...AGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAATAGATCTAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CAA 90 bp AGAGAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCAGCAGGAATGTCACCTaGGGTAGGCCCAGGGTATGG +
Preference number: 5 (lower is better)
Translates to: REIKAKCKLEVSSKVKSPSRNVT*GRPRVW
Trigger: CCATACCCTGGGCCTACCCAAGGTGACATTCCTGCT...GGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp ATGGCTCCCCTTAACTTTCAACCGACAAAGCAGCCATACCTACCTCTTTCTAAGTACTCAATCAGTACTTaGGGCCTCCTAATCCCCATC +
Preference number: 5 (lower is better)
Translates to: MAPLNFQPTKQPYLPLSKYSIST*GLLIPI
Trigger: GATGGGGATTAGGAGGCCCAAAGTACTGATTGAGTA...CTTAGAAAGAGGTAGGTATGGCTGCTTTGTCGGTTGAAAGTTAAGGGGAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAAATGCCACACTCCTGCTaGATTCTCACTTCCCAGGTT +
Preference number: 5 (lower is better)
Translates to: DEIVTLISQVPMPCKQQEMPHSC*ILTSQV
Trigger: AACCTGGGAAGTGAGAATCAAGCAGGAGTGTGGCAT...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp GAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCACTTGTAATCCTGACACTTaGGGAGGCCAGGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: EIKAKCKLEVSSKVKSPTCNPDT*GGQGGW
Trigger: CCACCCACCCTGGCCTCCCAAAGTGTCAGGATTACA...AGTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp CTTCTAAGGACCCATCACAGGCAAGTGGAATTTCTCTATCCTGACTTCATTCCCTCTCTCTGCTCATCTTaGCTATTTAACACGGCACCA +
Preference number: 5 (lower is better)
Translates to: LLRTHHRQVEFLYPDFIPSLCSS*LFNTAP
Trigger: TGGTGCCGTGTTAAATAGCAAAGATGAGCAGAGAGA...GGGAATGAAGTCAGGATAGAGAAATTCCACTTGCCTGTGATGGGTCCTTAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp CTGCAAGCAAGGCTCGCTAAGACATTCTTGCAGCTCAGAGAAATTAAAGCAAAGTGGGAGGAGGCGATTTaGGTCGAAGTCTCTCAATTT +
Preference number: 5 (lower is better)
Translates to: LQARLAKTFLQLREIKAKWEEAI*VEVSQF
Trigger: AAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCA...CTTTGCTTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAGCCTTGCTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CAA 90 bp CTTCTAAGGACCCATCACAGGCAAGTGGAATTTCTCTATCCTGACTTCATTCCCAGCTGTATCCTTAAGTaGAGGGTTTTCCGTAGTTGG +
Preference number: 5 (lower is better)
Translates to: LLRTHHRQVEFLYPDFIPSCILK*RVFRSW
Trigger: CCAACTACGGAAAACCCTCAACTTAAGGATACAGCT...GGGAATGAAGTCAGGATAGAGAAATTCCACTTGCCTGTGATGGGTCCTTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp AGAGAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCTCCCAGGTTGACACCTaGACCTCTCACACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: REIKAKCKLEVSSKVKSPSQVDT*TSHTVL
Trigger: CAGCACAGTGTGAGAGGTCAAGGTGTCAACCTGGGA...GGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS TCA 90 bp TCCAACTCCGGCTTTTCACTATCCCGAGTACTTGTCAATCTCCAGTaGACTCTTATCCAACCTTTCTTCCGAGTCTGTGGAACAAAATTC +
Preference number: 5 (lower is better)
Translates to: SNSGFSLSRVLVNLQ*TLIQPFFRVCGTKF
Trigger: GAATTTTGTTCCACAGACTCGGAAGAAAGGTTGGATAAGAGTTCACTGGAGATTGACAAGTACTCGGGATAGTGAAAAGCCGGAGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388822.10
ENST00000508801.1
ENST00000626212.2
ENST00000628452.2
CDS-3UTR CAA 90 bp TTAGATCTATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTCCACTCGCTAAGACATTCTaGCAGCTCAGAGAAATTAAA +
Preference number: 5 (lower is better)
Translates to: LDLFLSRPRPAEVPPLPPLAKTF*QLREIK
Trigger: TTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAG...TGGAGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAATAGATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CAA 90 bp TACTTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATGGATCTGTGAGTTGGTaGCCATGCCACACTCCTGCT +
Preference number: 5 (lower is better)
Translates to: YLSCSILFTHITKGRIIHGSVSW*PCHTPA
Trigger: AGCAGGAGTGTGGCATGGCAACCAACTCACAGATCC...ATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCCCCATTAAAAAGTTCTaGGCCTGCTTCTCTATTAAT +
Preference number: 5 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWIPIKKF*ACFSIN
Trigger: ATTAATAGAGAAGCAGGCCAAGAACTTTTTAATGGG...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp ACCAGAGTAACAGAGCAGAACTGCTGCAGTAGTGATCCCTCTCAACTCTGGATCGAACAAAATTGTGCTTaGAGGTTTTGTCCACTTTCA +
Preference number: 5 (lower is better)
Translates to: TRVTEQNCCSSDPSQLWIEQNCA*RFCPLS
Trigger: TGAAAGTGGACAAAACCTCAAAGCACAATTTTGTTC...GATCCAGAGTTGAGAGGGATCACTACTGCAGCAGTTCTGCTCTGTTACTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp ATGAATAGGTTCAATGTCTTCAACAATTATCGAGGTGGAAAGCCACCTCTGTGTACTGTGAGCCAGCCTTaGTTCTCTGAAAGACAGCCT +
Preference number: 5 (lower is better)
Translates to: MNRFNVFNNYRGGKPPLCTVSQP*FSERQP
Trigger: AGGCTGTCTTTCAGAGAACAAAGGCTGGCTCACAGT...ACACAGAGGTGGCTTTCCACCTCGATAATTGTTGAAGACATTGAACCTATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506780.2
CDS-3UTR CAA 90 bp ATCCCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTACACTATCCCGAGTACTaGTCAATCTCCAGTGAACTC +
Preference number: 5 (lower is better)
Translates to: IPDEILRSMSSVYKMLAVHYPEY*SISSEL
Trigger: GAGTTCACTGGAGATTGACAAGTACTCGGGATAGTG...TACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626212.2
ENST00000628452.2
CDS-3UTR CAA 90 bp CCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTAATCCACTATCCCGAGTACTaGTCAATCTCCAGTGAACTC +
Preference number: 5 (lower is better)
Translates to: PDEILRSMSSVYKMLAVIHYPEY*SISSEL
Trigger: GAGTTCACTGGAGATTGACAAGTACTCGGGATAGTG...GATTACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626212.2
ENST00000628452.2
CDS-3UTR CAA 90 bp CTTCTAAGGACCCATCACAGGCAAGTGGAATTTCTCTATCCTGACTTCATTCCCAGTGTCTACAAAATGTaGGCAGTAATCATTATGGGG +
Preference number: 5 (lower is better)
Translates to: LLRTHHRQVEFLYPDFIPSVYKM*AVIIMG
Trigger: CCCCATAATGATTACTGCCAACATTTTGTAGACACT...GGGAATGAAGTCAGGATAGAGAAATTCCACTTGCCTGTGATGGGTCCTTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp TTAGATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAATGGGAGGAGGCGATTTaGGTCGAAGTCTCTCAATTT +
Preference number: 5 (lower is better)
Translates to: LDLGGGDFGRSLSISSVQWEEAI*VEVSQF
Trigger: AAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCA...TTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CAA 90 bp TTAGATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAACGGTCAGATTTAGATTaGGGAGGAGGCGATTTTGGT +
Preference number: 5 (lower is better)
Translates to: LDLGGGDFGRSLSISSVQRSDLD*GGGDFG
Trigger: ACCAAAATCGCCTCCTCCCAAATCTAAATCTGACCG...TTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CAA 90 bp AAGTTAGATCTATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTCTCGCTAAGACATTCTaGCAGCTCAGAGAAATTAAA +
Preference number: 5 (lower is better)
Translates to: KLDLFLSRPRPAEVPPLPLAKTF*QLREIK
Trigger: TTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAG...AGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAATAGATCTAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CAA 90 bp ATGGCTCCCCTTAACTTTCAACCGACAAAGCAGCCATACCTACCTCTTTCTAAGAATATTTGTCCTCCTTaGCTTCTTAGGAAGCGTGAT +
Preference number: 5 (lower is better)
Translates to: MAPLNFQPTKQPYLPLSKNICPP*LLRKRD
Trigger: ATCACGCTTCCTAAGAAGCAAAGGAGGACAAATATT...CTTAGAAAGAGGTAGGTATGGCTGCTTTGTCGGTTGAAAGTTAAGGGGAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp ATCCCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTATCTCTCTGCTCATCTTaGCTATTTAACACGGCACCA +
Preference number: 5 (lower is better)
Translates to: IPDEILRSMSSVYKMLAVSLCSS*LFNTAP
Trigger: TGGTGCCGTGTTAAATAGCAAAGATGAGCAGAGAGA...TACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626212.2
ENST00000628452.2
CDS-3UTR CAA 90 bp GATGAAATTGTGACACTGATCTCACAGGTGCCTATGCCATGTAAACAGCAGGAAAGTGTCTACAAAATGTaGGCAGTAATCATTATGGGG +
Preference number: 5 (lower is better)
Translates to: DEIVTLISQVPMPCKQQESVYKM*AVIIMG
Trigger: CCCCATAATGATTACTGCCAACATTTTGTAGACACT...TTCCTGCTGTTTACATGGCATAGGCACCTGTGAGATCAGTGTCACAATTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp AAGTTAGATCTATTTCTTTCTCGTCCACGGCCAGCAGAAGTTCCACCTCTTCCTAGAATCACATCAAATTaGGGTGTTAGTTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: KLDLFLSRPRPAEVPPLPRITSN*GVSSLM
Trigger: CATCAGAGAACTAACACCCAAATTTGATGTGATTCT...AGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAGAAAGAAATAGATCTAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CAA 90 bp ATCCCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTAACTTACGTTTTGCATTaGGAGCAGAGGTATCATAGG +
Preference number: 5 (lower is better)
Translates to: IPDEILRSMSSVYKMLAVTYVLH*EQRYHR
Trigger: CCTATGATACCTCTGCTCCAAATGCAAAACGTAAGT...TACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR CAA 90 bp TTAGATTTGGGAGGAGGCGATTTTGGTCGAAGTCTCTCAATTTCTTCTGTACAACCAGATACTTACGTTTaGCATTTGGAGCAGAGGTAT +
Preference number: 5 (lower is better)
Translates to: LDLGGGDFGRSLSISSVQPDTYV*HLEQRY
Trigger: ATACCTCTGCTCCAAATGCAAAACGTAAGTATCTGG...TTGTACAGAAGAAATTGAGAGACTTCGACCAAAATCGCCTCCTCCCAAATCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR CAA 90 bp GAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCACTGCCAGCCTGGTCGAATaGTACTATCTCTTCCAAATA +
Preference number: 5 (lower is better)
Translates to: EIKAKCKLEVSSKVKSPTASLVE*YYLFQI
Trigger: TATTTGGAAGAGATAGTACAATTCGACCAGGCTGGC...AGTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp TTCATTGGAAACCTTTCCTCAATGAATACACAGTCATTGCAAAAACAACACCTCCGGTCAGATTTAGATTaGGGAGGAGGCGATTTTGGT +
Preference number: 5 (lower is better)
Translates to: FIGNLSSMNTQSLQKQHLRSDLD*GGGDFG
Trigger: ACCAAAATCGCCTCCTCCCAAATCTAAATCTGACCG...GAGGTGTTGTTTTTGCAATGACTGTGTATTCATTGAGGAAAGGTTTCCAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp CCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTAATCATGAAGCTACTTGAGTaGTTCCATTCTGTTCACGCA +
Preference number: 5 (lower is better)
Translates to: PDEILRSMSSVYKMLAVIMKLLE*FHSVHA
Trigger: TGCGTGAACAGAATGGAACAACTCAAGTAGCTTCAT...GATTACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628452.2
CDS-3UTR CAA 90 bp CTGCAAGCAAGGCTCGCTAAGACATTCTTGCAGCTCAGAGAAATTAAAGCAAAGCCCATTAAAAAGTTCTaGGCCTGCTTCTCTATTAAT +
Preference number: 5 (lower is better)
Translates to: LQARLAKTFLQLREIKAKPIKKF*ACFSIN
Trigger: ATTAATAGAGAAGCAGGCCAAGAACTTTTTAATGGG...CTTTGCTTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAGCCTTGCTTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp CCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTAATCTTCATCGTTTTGCATTaGGAGCAGAGGTATCATAGG +
Preference number: 5 (lower is better)
Translates to: PDEILRSMSSVYKMLAVIFIVLH*EQRYHR
Trigger: CCTATGATACCTCTGCTCCAAATGCAAAACGATGAA...GATTACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626212.2
CDS-3UTR CAA 90 bp TTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATTTACACTATCCCGAGTACTaGTCAATCTCCAGTGAACTC +
Preference number: 5 (lower is better)
Translates to: LSCSILFTHITKGRIIHLHYPEY*SISSEL
Trigger: GAGTTCACTGGAGATTGACAAGTACTCGGGATAGTG...TAAATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp ATCCCTGATGAAATTCTGAGGTCTATGTCCAGTGTCTACAAAATGTTGGCAGTAAGTGTCTACAAAATGTaGGCAGTAATCATTATGGGG +
Preference number: 5 (lower is better)
Translates to: IPDEILRSMSSVYKMLAVSVYKM*AVIIMG
Trigger: CCCCATAATGATTACTGCCAACATTTTGTAGACACT...TACTGCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626212.2
ENST00000628452.2
CDS-3UTR CAA 90 bp GAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCACTATGAAGCTACTTGAGTaGTTCCATTCTGTTCACGCA +
Preference number: 5 (lower is better)
Translates to: EIKAKCKLEVSSKVKSPTMKLLE*FHSVHA
Trigger: TGCGTGAACAGAATGGAACAACTCAAGTAGCTTCAT...AGTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CAA 90 bp AGAGAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCCTCGCTAAGACATTCTaGCAGCTCAGAGAAATTAAA +
Preference number: 5 (lower is better)
Translates to: REIKAKCKLEVSSKVKSPLAKTF*QLREIK
Trigger: TTTAATTTCTCTGAGCTGCAAGAATGTCTTAGCGAG...GGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CAA 90 bp TTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATTTACCAGATACTTACGTTTaGCATTTGGAGCAGAGGTAT +
Preference number: 5 (lower is better)
Translates to: LSCSILFTHITKGRIIHLPDTYV*HLEQRY
Trigger: ATACCTCTGCTCCAAATGCAAAACGTAAGTATCTGG...TAAATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp AGAGAAATTAAAGCAAAGTGCAAGCTGGAAGTGAGTTCTAAAGTTAAGTCTCCCAGAATCACATCAAATTaGGGTGTTAGTTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: REIKAKCKLEVSSKVKSPRITSN*GVSSLM
Trigger: CATCAGAGAACTAACACCCAAATTTGATGTGATTCT...GGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000506780.2
ENST00000628452.2
CDS-3UTR CAA 90 bp TACTTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATAATATTTGTCCTCCTTaGCTTCTTAGGAAGCGTGAT +
Preference number: 5 (lower is better)
Translates to: YLSCSILFTHITKGRIIHNICPP*LLRKRD
Trigger: ATCACGCTTCCTAAGAAGCAAAGGAGGACAAATATT...ATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS-3UTR CAA 90 bp TTGAGTTGTTCCATTCTGTTCACGCACATAACAAAAGGCAGAATCATTCATTTAGAACAAAATTGTGCTTaGAGGTTTTGTCCACTTTCA +
Preference number: 5 (lower is better)
Translates to: LSCSILFTHITKGRIIHLEQNCA*RFCPLS
Trigger: TGAAAGTGGACAAAACCTCAAAGCACAATTTTGTTC...TAAATGAATGATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS GCA 72 bp CCCAACTGCTGCGCGAGGAGCTGTCGCCGTAACTTCTaGCGCTCCCGGATCTCCTGCAAGCGGCTATCCATG +
Preference number: 6 (lower is better)
Translates to: PNCCARSCRRNF*RSRISCKRLSM
Trigger: CATGGATAGCCGCTTGCAGGAGATCCGGGAGCGGCAGAAGTTACGGCGACAGCTCCTCGCGCAGCAGTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000626212.2
ENST00000628452.2
CDS GCA 72 bp CAAATCTGCTGCGCGAGGAGCTGTCGCCGTAACTTCTaGCGCTCCCGGATCTCCTGCAAGCGGCTATCCATG +
Preference number: 6 (lower is better)
Translates to: QICCARSCRRNF*RSRISCKRLSM
Trigger: CATGGATAGCCGCTTGCAGGAGATCCGGGAGCGGCAGAAGTTACGGCGACAGCTCCTCGCGCAGCAGATTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508801.1
CDS GCA 72 bp AGCTGTCGCCGTAACTTCTGCCGCTCCCGGATCTCCTaGAAGCGGCTATCCATGTTCCAACTCCGGCTTTTC +
Preference number: 6 (lower is better)
Translates to: SCRRNFCRSRIS*KRLSMFQLRLF
Trigger: GAAAAGCCGGAGTTGGAACATGGATAGCCGCTTGCAGGAGATCCGGGAGCGGCAGAAGTTACGGCGACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388822.10
ENST00000508801.1
ENST00000626212.2
ENST00000628452.2
CDS GCA 72 bp AGTTTCCACGGTTTTAGCCATATTCCACAAATCTGCTaGGCGAGGAGCTGTCGCCGTAACTTCTGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: SFHGFSHIPQIC*ARSCRRNFCRS
Trigger: GGAGCGGCAGAAGTTACGGCGACAGCTCCTCGCGCAGCAGATTTGTGGAATATGGCTAAAACCGTGGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508801.1
CDS GCA 72 bp CCAAGTTTCCACGGTTTTAGCCATATTCCACAAATCTaGTGCGCGAGGAGCTGTCGCCGTAACTTCTGCCGC +
Preference number: 6 (lower is better)
Translates to: PSFHGFSHIPQI*CARSCRRNFCR
Trigger: GCGGCAGAAGTTACGGCGACAGCTCCTCGCGCAGCAGATTTGTGGAATATGGCTAAAACCGTGGAAACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508801.1
CDS GCA 72 bp CTCTCTGCTCATCTTTGCTATTTAACACGGCACCAATaGTGTCGGCACTTTCAGCTCCCAACTGCTGCGCGA +
Preference number: 6 (lower is better)
Translates to: LSAHLCYLTRHQ*CRHFQLPTAAR
Trigger: TCGCGCAGCAGTTGGGAGCTGAAAGTGCCGACAGCATTGGTGCCGTGTTAAATAGCAAAGATGAGCAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388822.10
ENST00000626212.2
ENST00000628452.2
CDS CAA 90 bp GCGGCTATCCATGTTCCAACTCCGGCTTTTCACTATCCCGAGTACTaGTCAATCTCCAGTGAACTCTTATCCAACCTTTCTTCCGAGTCT +
Preference number: 6 (lower is better)
Translates to: AAIHVPTPAFHYPEY*SISSELLSNLSSES
Trigger: AGACTCGGAAGAAAGGTTGGATAAGAGTTCACTGGAGATTGACAAGTACTCGGGATAGTGAAAAGCCGGAGTTGGAACATGGATAGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388822.10
ENST00000508801.1
ENST00000626212.2
ENST00000628452.2
CDS CAA 90 bp GCCCTGCAAGTTTCTCTTGTTTCAGCAATTTCTCTCTGCTCATCTTaGCTATTTAACACGGCACCAATGCTGTCGGCACTTTCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: ALQVSLVSAISLCSS*LFNTAPMLSALSAP
Trigger: GGGAGCTGAAAGTGCCGACAGCATTGGTGCCGTGTTAAATAGCAAAGATGAGCAGAGAGAAATTGCTGAAACAAGAGAAACTTGCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388822.10
ENST00000508801.1
ENST00000626212.2
ENST00000628452.2
CDS TCA 72 bp GGCTTTTCACTATCCCGAGTACTTGTCAATCTCCAGTaGACTCTTATCCAACCTTTCTTCCGAGTCTGTGGA +
Preference number: 6 (lower is better)
Translates to: GFSLSRVLVNLQ*TLIQPFFRVCG
Trigger: TCCACAGACTCGGAAGAAAGGTTGGATAAGAGTTCACTGGAGATTGACAAGTACTCGGGATAGTGAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388822.10
ENST00000508801.1
ENST00000626212.2
ENST00000628452.2
CDS CAA 72 bp CTTCATCTGTCTCTCCTTCATCCAGATACTTACGTTTaGCATTTGGAGCAGAGGTATCATAGGAAGCCCTGC +
Preference number: 6 (lower is better)
Translates to: LHLSLLHPDTYV*HLEQRYHRKPC
Trigger: GCAGGGCTTCCTATGATACCTCTGCTCCAAATGCAAAACGTAAGTATCTGGATGAAGGAGAGACAGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS GCA 72 bp TTCATCTGTCTCTCCTTCATCCAGATACTTACGTTTTaGATTTGGAGCAGAGGTATCATAGGAAGCCCTGCA +
Preference number: 6 (lower is better)
Translates to: FICLSFIQILTF*IWSRGIIGSPA
Trigger: TGCAGGGCTTCCTATGATACCTCTGCTCCAAATGCAAAACGTAAGTATCTGGATGAAGGAGAGACAGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388822.10
ENST00000628452.2
CDS CAA 72 bp CATGTTCCAACTCCGGCTTTTCACTATCCCGAGTACTaGTCAATCTCCAGTGAACTCTTATCCAACCTTTCT +
Preference number: 6 (lower is better)
Translates to: HVPTPAFHYPEY*SISSELLSNLS
Trigger: AGAAAGGTTGGATAAGAGTTCACTGGAGATTGACAAGTACTCGGGATAGTGAAAAGCCGGAGTTGGAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388822.10
ENST00000508801.1
ENST00000626212.2
ENST00000628452.2
CDS TCA 72 bp AAGAAGTTGGCGAAAAGAAGACTTAGAAAGGATACTTaGTTTGCCCAAGATCGTAATGCCAGCGGGATAAGG +
Preference number: 6 (lower is better)
Translates to: KKLAKRRLRKDT*FAQDRNASGIR
Trigger: CCTTATCCCGCTGGCATTACGATCTTGGGCAAATCAAGTATCCTTTCTAAGTCTTCTTTTCGCCAACTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508801.1