RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MEGF8 (Homo sapiens)

Ensembl gene IDs: ENSG00000105429

Ensembl transcript IDs: ENST00000251268.11, ENST00000334370.8, ENST00000378073.5, ENST00000593647.1, ENST00000593840.1, ENST00000598762.1, ENST00000599787.1

Found 1764 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTCCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTaGCGCCGGGCCCACTTGGGTCTCCCACGCCCAGCAGCAGCAGGT +
Preference number: 1 (lower is better)
Translates to: GPAGRRAGPASRLSR*RRAHLGLPRPAAAG
Trigger: ACCTGCTGCTGCTGGGCGTGGGAGACCCAAGTGGGCCCGGCGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR GCA 90 bp GTAGGTGATGACCAGCCGGTCCCGCACGCCGCGGACCACCAGCACTaGCGACGGCTCCGTCACCGTCACGTAGGTAATCAGGCCCCGCGG +
Preference number: 1 (lower is better)
Translates to: VGDDQPVPHAADHQH*RRLRHRHVGNQAPR
Trigger: CCGCGGGGCCTGATTACCTACGTGACGGTGACGGAGCCGTCGGCAGTGCTGGTGGTCCGCGGCGTGCGGGACCGGCTGGTCATCACCTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR CCA 90 bp GAGCCCAGCCGGCTTCCAGGCGGAGGCCGGGGCAGTAGGGTCAGGTaGGAAGCAGACGGTGACCTTGGCGAAGGGGCGGCTGGCCATCTT +
Preference number: 1 (lower is better)
Translates to: EPSRLPGGGRGSRVR*EADGDLGEGAAGHL
Trigger: AAGATGGCCAGCCGCCCCTTCGCCAAGGTCACCGTCTGCTTCCCACCTGACCCTACTGCCCCGGCCTCCGCCTGGAAGCCGGCTGGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR GCA 90 bp ACCTTGGCGAAGGGGCGGCTGGCCATCTTGGTCATCTCCTGCAAGTaGCGGCGCTGCTCCTGCCGCTGGTCCAGAGCCTGCTTGGCCTTC +
Preference number: 1 (lower is better)
Translates to: TLAKGRLAILVISCK*RRCSCRWSRACLAF
Trigger: GAAGGCCAAGCAGGCTCTGGACCAGCGGCAGGAGCAGCGCCGGCACTTGCAGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR GCA 90 bp ACGGTGACCTTGGCGAAGGGGCGGCTGGCCATCTTGGTCATCTCCTaGAAGTGCCGGCGCTGCTCCTGCCGCTGGTCCAGAGCCTGCTTG +
Preference number: 1 (lower is better)
Translates to: TVTLAKGRLAILVIS*KCRRCSCRWSRACL
Trigger: CAAGCAGGCTCTGGACCAGCGGCAGGAGCAGCGCCGGCACTTGCAGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCAAGGTCACCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR CCA 90 bp CAGCAGCAGGTAGAAGCGGCTCGACTTGAGGGCATGGTGCTCGTGTaGGTAGGTGATGACCAGCCGGTCCCGCACGCCGCGGACCACCAG +
Preference number: 1 (lower is better)
Translates to: QQQVEAARLEGMVLV*VGDDQPVPHAADHQ
Trigger: CTGGTGGTCCGCGGCGTGCGGGACCGGCTGGTCATCACCTACCCACACGAGCACCATGCCCTCAAGTCGAGCCGCTTCTACCTGCTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR CCA 90 bp CGCCAGTGTCAGGGGCCACACGGACCACGAAGGTGTCATAGGAGGTaGAGACATAGAGGTCCACGGCCCCGAAGGTCACGTCCAGCGTCA +
Preference number: 1 (lower is better)
Translates to: RQCQGPHGPRRCHRR*RHRGPRPRRSRPAS
Trigger: TGACGCTGGACGTGACCTTCGGGGCCGTGGACCTCTATGTCTCCACCTCCTATGACACCTTCGTGGTCCGTGTGGCCCCTGACACTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR TCA 90 bp GCTGCTGTGGATGAGAACCCTGGGCATGTCAGAGGGACATGCTGGTaGGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCCGCACCAGTCC +
Preference number: 1 (lower is better)
Translates to: AAVDENPGHVRGTCW*GCPGSTVPSGPHQS
Trigger: GGACTGGTGCGGGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAGGGTTCTCATCCACAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR GCA 90 bp GCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTaGTGCCCCTCTTGTCCCTCCGGTCCATTCTCCACAGCACAACTG +
Preference number: 1 (lower is better)
Translates to: ARLPHCQHPTPAHHP*CPSCPSGPFSTAQL
Trigger: CAGTTGTGCTGTGGAGAATGGACCGGAGGGACAAGAGGGGCAGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR GCA 90 bp AGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTaGCCCTCTTGTCCCTCCGGTCCATTCTCCACAGCACAACTGAGT +
Preference number: 1 (lower is better)
Translates to: RLPHCQHPTPAHHPC*PSCPSGPFSTAQLS
Trigger: ACTCAGTTGTGCTGTGGAGAATGGACCGGAGGGACAAGAGGGGCAGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR GCA 90 bp TCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGTCTCAGGGTaGCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAA +
Preference number: 1 (lower is better)
Translates to: SLQPGGPIHLWAVSG*HLSLSSCFPRQRYQ
Trigger: TTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR GCA 90 bp AAGAAGACGGAGAAGAAGACAAACAGGTCAATGTGGGCCTGGTCCTaGCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTGGCG +
Preference number: 1 (lower is better)
Translates to: KKTEKKTNRSMWAWS*RKKSRPCESAEPLA
Trigger: CGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGTCTTCTTCTCCGTCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR CCA 90 bp CAGGAGAAGAAGACGGAGAAGAAGACAAACAGGTCAATGTGGGCCTaGTCCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCG +
Preference number: 1 (lower is better)
Translates to: QEKKTEKKTNRSMWA*SCRKKSRPCESAEP
Trigger: CGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGTCTTCTTCTCCGTCTTCTTCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR GCA 90 bp GAGAGCCCAGAAATCTTCCAGGCAGCACTGTCTGGAACAGGGCTGTaGACTGACGGTACCGGCATTTTCATCCCCAACCTCAGTGGCCCC +
Preference number: 1 (lower is better)
Translates to: ESPEIFQAALSGTGL*TDGTGIFIPNLSGP
Trigger: GGGGCCACTGAGGTTGGGGATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTGGAAGATTTCTGGGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR TCA 90 bp CCGCTGGTCCAGAGCCTGCTTGGCCTTCCAGAGGAGCACACAGAGTaGGAGGAAGAGGAAGAAGCAGGAGAAGAAGACGGAGAAGAAGAC +
Preference number: 1 (lower is better)
Translates to: PLVQSLLGLPEEHTE*EEEEEAGEEDGEED
Trigger: GTCTTCTTCTCCGTCTTCTTCTCCTGCTTCTTCCTCTTCCTCTCACTCTGTGTGCTCCTCTGGAAGGCCAAGCAGGCTCTGGACCAGCGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR GCA 90 bp CATTGGCTAGGGCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATaGAAAGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGA +
Preference number: 1 (lower is better)
Translates to: HWLGPLTLRLHAKGR*KVQSLQELVMEVLG
Trigger: TCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGCCCTAGCCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR CCA 90 bp TTACTTGTGTGTGCACATGTGCATGTGTTCATGTGTGTATGCGTGTaGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCT +
Preference number: 1 (lower is better)
Translates to: LLVCAHVHVFMCVCV*GVCMCTDCLPSPEP
Trigger: AGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGCATACACACATGAACACATGCACATGTGCACACACAAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR TCA 90 bp AGTGAAGAGATGTCTGAAGGGCATCTCATGTCAAGAACCAGACTCTaGTCTTCCTCACAAGCCTCAGTCTGCCCCATTCAATTAACGATC +
Preference number: 1 (lower is better)
Translates to: SEEMSEGHLMSRTRL*SSSQASVCPIQLTI
Trigger: GATCGTTAATTGAATGGGGCAGACTGAGGCTTGTGAGGAAGATCAGAGTCTGGTTCTTGACATGAGATGCCCTTCAGACATCTCTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR CAA 90 bp TGGTCCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTaGGCGCCGGGCCCACTTGGGTCTCCCACGCCCAGCAGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: WSCRKKSRPCESAEP*APGPLGSPTPSSSR
Trigger: CCTGCTGCTGCTGGGCGTGGGAGACCCAAGTGGGCCCGGCGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGGACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CCA 90 bp CCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTGGCGCCGGGCCAAAGGAGGCCCCATCTaGGCAACCCTGGGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: PAGRRAGPASRLSRWRRAKGGPI*ATLGEG
Trigger: CCCTTCCCCCAGGGTTGCCCAGATGGGGCCTCCTTT...GGCCCGGCGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CCA 90 bp GGCCACGCCAGCCATGCCATCTTCTGTGGGCTCGAGAGTGATGGGCCCAGCTCGCAGTGGTGGCGGGGATaGCTGGTGGGCAGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: GHASHAIFCGLESDGPSSQWWRG*LVGSSP
Trigger: GGGGCTGCTGCCCACCAGCCATCCCCGCCACCACTG...CGAGCTGGGCCCATCACTCTCGAGCCCACAGAAGATGGCATGGCTGGCGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR CAA 90 bp GGTGGGAAGCAGACGGTGACCTTGGCGAAGGGGCGGCTGGCCATCTaGGTCATCTCCTGCAAGTGCCGGCGCTGCTCCTGCCGCTGGTCC +
Preference number: 2 (lower is better)
Translates to: GGKQTVTLAKGRLAI*VISCKCRRCSCRWS
Trigger: GGACCAGCGGCAGGAGCAGCGCCGGCACTTGCAGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCAAGGTCACCGTCTGCTTCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR CAA 90 bp GCGGAGGCCGGGGCAGTAGGGTCAGGTGGGAAGCAGACGGTGACCTaGGCGAAGGGGCGGCTGGCCATCTTGGTCATCTCCTGCAAGTGC +
Preference number: 2 (lower is better)
Translates to: AEAGAVGSGGKQTVT*AKGRLAILVISCKC
Trigger: GCACTTGCAGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCAAGGTCACCGTCTGCTTCCCACCTGACCCTACTGCCCCGGCCTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR CAA 90 bp TCCACGGCCCCGAAGGTCACGTCCAGCGTCAGGCGGATGTCCACGTaGGTGAATTTGGGCTGCACGCCAAAGAGGACAGTGCGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: STAPKVTSSVRRMST*VNLGCTPKRTVRPG
Trigger: CCCCGGCCGCACTGTCCTCTTTGGCGTGCAGCCCAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTCGGGGCCGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR GCA 90 bp GGCCACGCCAGCCATGCCATCTTCTGTGGGCTCGAGAGTGATGGGCCCAGCTCGTGTCAGCAGCAGGGGTaGCAGGAAGGGCTCAGAGCG +
Preference number: 2 (lower is better)
Translates to: GHASHAIFCGLESDGPSSCQQQG*QEGLRA
Trigger: CGCTCTGAGCCCTTCCTGGCACCCCTGCTGCTGACA...CGAGCTGGGCCCATCACTCTCGAGCCCACAGAAGATGGCATGGCTGGCGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR TCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGTGGGAAGCAGACGGTaGCCTTGGCGAAGGGGCGGC +
Preference number: 2 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVVGSRR*PWRRGG
Trigger: GCCGCCCCTTCGCCAAGGTCACCGTCTGCTTCCCAC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR GCA 90 bp ATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCCCGGGGCCCACCATCTaGAGGGGGTGGTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: MSEGHAGEVVLAQQSLPAPGPTI*RGWWRW
Trigger: CCACCTCCACCACCCCCTGCAGATGGTGGGCCCCGG...GGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGCGGACCACCAGCACTaGCGACGGCTCCGTCACCGT +
Preference number: 2 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVADHQH*RRLRHR
Trigger: ACGGTGACGGAGCCGTCGGCAGTGCTGGTGGTCCGC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR GCA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTGCAGGCGCCGTTGGGTaGATGGGGCCCGCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLAGAVG*MGPARQ
Trigger: CTGCCTGGCGGGCCCCATGCACCCAACGGCGCCTGC...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAGGGCCCACAAGGCCCTaGGTGATCCAGCCCCTGACT +
Preference number: 2 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASGPTRP*VIQPLT
Trigger: AGTCAGGGGCTGGATCACCCAGGGCCTTGTGGGCCC...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR CCA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTGCGCCGTTGGGTGCATaGGGCCCGCCAGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLAPLGA*GPPGSW
Trigger: CCAGCTGCCTGGCGGGCCCCATGCACCCAACGGCGC...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCTGGAGGCCTCACAGTaGTTCTCCCTCTCTGAAGCC +
Preference number: 2 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQLEASQ*FSLSEA
Trigger: GGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCTGGAGGCCTCACAGTaGTTCTCCCTCTCTGAAGCC +
Preference number: 2 (lower is better)
Translates to: RGQESKEVAQVRGGASGELEASQ*FSLSEA
Trigger: GGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR GCA 90 bp CCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTGGCGCCGGGCCTCTAGCTTCTTTGAATaGCCAGCTGACTTCACCCCA +
Preference number: 2 (lower is better)
Translates to: PAGRRAGPASRLSRWRRASSFFE*PADFTP
Trigger: TGGGGTGAAGTCAGCTGGGCATTCAAAGAAGCTAGA...GGCCCGGCGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCGGGGAAGGGGGCCAGTaGTCTCCAAGTAGACAGTGT +
Preference number: 2 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGGEGGQ*SPSRQC
Trigger: ACACTGTCTACTTGGAGACCACTGGCCCCCTTCCCC...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCGGGAACCTCGTCTCTTaGTTCCTGCTTTGCCCCACG +
Preference number: 2 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGGNLVS*FLLCPT
Trigger: CGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCC...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp GGCCACGCCAGCCATGCCATCTTCTGTGGGCTCGAGAGTGATGGGCCCAGCTCGGGGAACCTCGTCTCTTaGTTCCTGCTTTGCCCCACG +
Preference number: 2 (lower is better)
Translates to: GHASHAIFCGLESDGPSSGNLVS*FLLCPT
Trigger: CGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCC...CGAGCTGGGCCCATCACTCTCGAGCCCACAGAAGATGGCATGGCTGGCGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCATGCCCACCTGGGGTaGGATCTCAGGCAGAGGTTT +
Preference number: 2 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGHAHLG*DLRQRF
Trigger: AAACCTCTGCCTGAGATCCCACCCCAGGTGGGCATG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAGGCTCAGGTGCGGGGTaGCGCCTCAGGAGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGGSGAG*RLRRAQ
Trigger: CTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCC...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCACCATCTGGGCAACCCTaGGGGAAGGGGGCCAGTGGT +
Preference number: 2 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPPSGQP*GKGASG
Trigger: ACCACTGGCCCCCTTCCCCCAGGGTTGCCCAGATGG...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp ATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCCCATCTGGGCAACCCTaGGGGAAGGGGGCCAGTGGT +
Preference number: 2 (lower is better)
Translates to: MSEGHAGEVVLAQQSLPAPSGQP*GKGASG
Trigger: ACCACTGGCCCCCTTCCCCCAGGGTTGCCCAGATGG...GGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CCA 90 bp ATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCGGGCCCACAAGGCCCTaGGTGATCCAGCCCCTGACT +
Preference number: 2 (lower is better)
Translates to: MSEGHAGEVVLAQQSLPAGPTRP*VIQPLT
Trigger: AGTCAGGGGCTGGATCACCCAGGGCCTTGTGGGCCC...GGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR TCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAACAGGGCTGTGCACTaGCGGTACCGGCATTTTCAT +
Preference number: 2 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGNRAVH*RYRHFH
Trigger: ATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTT...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGAAAGGAGGCCCCATCTaGGCAACCCTGGGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVKGGPI*ATLGEG
Trigger: CCCTTCCCCCAGGGTTGCCCAGATGGGGCCTCCTTT...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp AAGAAGACGGAGAAGAAGACAAACAGGTCAATGTGGGCCTGGTCCTGCCGGAAGTACCCGTGGCTCTGCTaGGGCGCCCGGCCCACTGCT +
Preference number: 2 (lower is better)
Translates to: KKTEKKTNRSMWAWSCRKYPWLC*GARPTA
Trigger: AGCAGTGGGCCGGGCGCCCCAGCAGAGCCACGGGTA...CTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGTCTTCTTCTCCGTCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR TCA 90 bp ATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCAGAAGCGGCTCGACTTaGGGGCATGGTGCTCGTGTG +
Preference number: 2 (lower is better)
Translates to: MSEGHAGEVVLAQQSLPARSGST*GHGARV
Trigger: CACACGAGCACCATGCCCTCAAGTCGAGCCGCTTCT...GGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGCAGGGCCTCTGCCTTTaGTTCCCAAAGCTCTTCCCG +
Preference number: 2 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVQGLCL*FPKLFP
Trigger: CGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTG...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCCACCCCAGGGCCTCTaGCTTTGCTTCCCAAAGCTC +
Preference number: 2 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVPPQGL*LCFPKL
Trigger: GAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCATATTGGCCAGGCTaGTCACGAACTCTTGACCTT +
Preference number: 2 (lower is better)
Translates to: RGQESKEVAQVRGGASGEPYWPG*SRTLDL
Trigger: AAGGTCAAGAGTTCGTGACCAGCCTGGCCAATATGG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp GGCCACGCCAGCCATGCCATCTTCTGTGGGCTCGAGAGTGATGGGCCCAGCTCGCCATATTGGCCAGGCTaGTCACGAACTCTTGACCTT +
Preference number: 2 (lower is better)
Translates to: GHASHAIFCGLESDGPSSPYWPG*SRTLDL
Trigger: AAGGTCAAGAGTTCGTGACCAGCCTGGCCAATATGG...CGAGCTGGGCCCATCACTCTCGAGCCCACAGAAGATGGCATGGCTGGCGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR TCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGAACTCTTGACCTTGTaGTCAGCCCACCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVELLTL*SAHLGL
Trigger: GAGGCCAAGGTGGGCTGATCACAAGGTCAAGAGTTC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR TCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCATACACATCCCACATCTaGGCCAGACTCCCTCATTGC +
Preference number: 2 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASYTSHI*ARLPHC
Trigger: GCAATGAGGGAGTCTGGCTCAGATGTGGGATGTGTA...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR TCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGAGAGGGACATGCTGGTaGGGTTGTCCTGGCTCAACA +
Preference number: 2 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVRGTCW*GCPGST
Trigger: TGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCT...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR GCA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCCACCCCAGGGCCTCTaGCTTTGCTTCCCAAAGCTC +
Preference number: 2 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLPPQGL*LCFPKL
Trigger: GAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGG...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACCATCTGGGCAACCCTaGGGGAAGGGGGCCAGTGGT +
Preference number: 2 (lower is better)
Translates to: SPVPPGASDGSLGKGESQPSGQP*GKGASG
Trigger: ACCACTGGCCCCCTTCCCCCAGGGTTGCCCAGATGG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTAAAGGAGGCCCCATCTaGGCAACCCTGGGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPKGGPI*ATLGEG
Trigger: CCCTTCCCCCAGGGTTGCCCAGATGGGGCCTCCTTT...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTGGCGGCTGGCCATCTTaGTCATCTCCTGCAAGTGCC +
Preference number: 2 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLGGWPS*SSPASA
Trigger: GGCACTTGCAGGAGATGACCAAGATGGCCAGCCGCC...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACTGGAGGCCTCACAGTaGTTCTCCCTCTCTGAAGCC +
Preference number: 2 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGLEASQ*FSLSEA
Trigger: GGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR GCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCAGGGCCTCTGCCTTTaGTTCCCAAAGCTCTTCCCG +
Preference number: 2 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIQGLCL*FPKLFP
Trigger: CGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCCAATAAAACAAGCCTaGTCCCACCCCAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVPIKQA*SHPRAS
Trigger: AGAGGCCCTGGGGTGGGAGCAGGCTTGTTTTATTGG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCCGTACCCGTGGCTCTaGTGGGGCGCCCGGCCCACT +
Preference number: 2 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSPYPWL*WGARPT
Trigger: AGTGGGCCGGGCGCCCCAGCAGAGCCACGGGTACGG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGTGACCCAGCTGCTGTaGATGAGAACCCTGGGCATG +
Preference number: 2 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPVTQLL*MRTLGM
Trigger: CATGCCCAGGGTTCTCATCCACAGCAGCTGGGTCAC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAGTGACCCAGCTGCTGTaGATGAGAACCCTGGGCATG +
Preference number: 2 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGVTQLL*MRTLGM
Trigger: CATGCCCAGGGTTCTCATCCACAGCAGCTGGGTCAC...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGGGGTTTCACCATATTaGCCAGGCTGGTCACGAACT +
Preference number: 2 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAGVSPY*PGWSRT
Trigger: AGTTCGTGACCAGCCTGGCCAATATGGTGAAACCCC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGAGGTGTCATAGGAGGTaGAGACATAGAGGTCCACGG +
Preference number: 2 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVRCHRR*RHRGPR
Trigger: CCGTGGACCTCTATGTCTCCACCTCCTATGACACCT...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTTGGTGGGGCTGGGGGTaGCTGGATGTGTACAGTATG +
Preference number: 2 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPWWGWG*LDVYSM
Trigger: CATACTGTACACATCCAGCCACCCCCAGCCCCACCA...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACTGGAGGTGGTGGGGCTaGGGGTGGCTGGATGTGTAC +
Preference number: 2 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHWRWWG*GWLDVY
Trigger: GTACACATCCAGCCACCCCCAGCCCCACCACCTCCA...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR TCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGTGCTTCTCCCTCTCTaGAGCCATCTTACTTGTGTG +
Preference number: 2 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAVLLPL*SHLTCV
Trigger: CACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCAC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR TCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGGATGTCCACGTTGGTaGATTTGGGCTGCACGCCAA +
Preference number: 2 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPGCPRW*IWAARQ
Trigger: TTGGCGTGCAGCCCAAATTCACCAACGTGGACATCC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACTGTCTCTTTCCAGCTaGTTCCCTCGCCAGCGCTAT +
Preference number: 2 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGLSLSS*FPRQRY
Trigger: ATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR GCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCTGTCTCTTTCCAGCTaGTTCCCTCGCCAGCGCTAT +
Preference number: 2 (lower is better)
Translates to: QAALSGTGLCTDGTGIFILSLSS*FPRQRY
Trigger: ATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR GCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCTGGGCTGTCTCAGGGTaGCATCTGTCTCTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIWAVSG*HLSLSS
Trigger: GCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCA...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGGGGGTTTCACCATATTaGCCAGGCTGGTCACGAACT +
Preference number: 2 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLGVSPY*PGWSRT
Trigger: AGTTCGTGACCAGCCTGGCCAATATGGTGAAACCCC...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCTACCTCCCGTACCCGTaGCTCTGCTGGGGCGCCCGG +
Preference number: 2 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSYLPYP*LCWGAR
Trigger: CCGGGCGCCCCAGCAGAGCCACGGGTACGGGAGGTA...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR TCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGTCTCCTCCCTCACCCTaGCATCCACACCATCATTTA +
Preference number: 2 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLSPPSP*HPHHHL
Trigger: TAAATGATGGTGTGGATGTCAGGGTGAGGGAGGAGA...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCATCTTACTTGTGTGTaGACATGTGCATGTGTTCAT +
Preference number: 2 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQHLTCV*TCACVH
Trigger: ATGAACACATGCACATGTGCACACACAAGTAAGATG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp AAGAAGACGGAGAAGAAGACAAACAGGTCAATGTGGGCCTGGTCCTGCCGGAAGGTGACCCAGCTGCTGTaGATGAGAACCCTGGGCATG +
Preference number: 2 (lower is better)
Translates to: KKTEKKTNRSMWAWSCRKVTQLL*MRTLGM
Trigger: CATGCCCAGGGTTCTCATCCACAGCAGCTGGGTCAC...CTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGTCTTCTTCTCCGTCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAAAGGAGGCCCCATCTaGGCAACCCTGGGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIKGGPI*ATLGEG
Trigger: CCCTTCCCCCAGGGTTGCCCAGATGGGGCCTCCTTT...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGGGCCCACAAGGCCCTaGGTGATCCAGCCCCTGACT +
Preference number: 2 (lower is better)
Translates to: CACALIVSLHQNLSPMRSGPTRP*VIQPLT
Trigger: AGTCAGGGGCTGGATCACCCAGGGCCTTGTGGGCCC...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR CCA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTGGGGTTTCACCATATTaGCCAGGCTGGTCACGAACT +
Preference number: 2 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLGVSPY*PGWSRT
Trigger: AGTTCGTGACCAGCCTGGCCAATATGGTGAAACCCC...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTATGGATGTGTACAGTATaGACGCCAGTGTCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: LPHPLEASQCFSLSEAILWMCTV*TPVSGA
Trigger: GGCCCCTGACACTGGCGTCCATACTGTACACATCCA...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR CAA 90 bp TTATATTCTTCCATACACATCCCACATCTGAGCCAGACTCCCTCATaGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGCCCCTCTTG +
Preference number: 2 (lower is better)
Translates to: LYSSIHIPHLSQTPS*PAPYSSPPSLLPLL
Trigger: CAAGAGGGGCAGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGATGTGGGATGTGTATGGAAGAATATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR TCA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTGTGCTTCTCCCTCTCTaGAGCCATCTTACTTGTGTG +
Preference number: 2 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLVLLPL*SHLTCV
Trigger: CACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCAC...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR TCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGATCTCCTCCCTCACCCTaGCATCCACACCATCATTTA +
Preference number: 2 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGSPPSP*HPHHHL
Trigger: TAAATGATGGTGTGGATGTCAGGGTGAGGGAGGAGA...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR TCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGTCAAGAACCAGACTCTaGTCTTCCTCACAAGCCTCA +
Preference number: 2 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSSRTRL*SSSQAS
Trigger: TGAGGCTTGTGAGGAAGATCAGAGTCTGGTTCTTGA...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR TCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGATCCCTAGTTGGACCTaGGTGAAGAGATGTCTGAAG +
Preference number: 2 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLIPSWT*VKRCLK
Trigger: CTTCAGACATCTCTTCACTCAGGTCCAACTAGGGAT...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR GCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACCCCCACAGTACTCGTaGAGCCTGTGCCGCAGTGTG +
Preference number: 2 (lower is better)
Translates to: CACALIVSLHQNLSPMRSPPQYS*SLCRSV
Trigger: CACACTGCGGCACAGGCTGCACGAGTACTGTGGGGG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGGGGCTGGGGGTGGCTaGATGTGTACAGTATGGACG +
Preference number: 2 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIGAGGG*MCTVWT
Trigger: CGTCCATACTGTACACATCCAGCCACCCCCAGCCCC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR TCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCTCAAGAACCAGACTCTaGTCTTCCTCACAAGCCTCA +
Preference number: 2 (lower is better)
Translates to: QAALSGTGLCTDGTGIFISRTRL*SSSQAS
Trigger: TGAGGCTTGTGAGGAAGATCAGAGTCTGGTTCTTGA...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR TCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACTGTGGGCTCGAGAGTaGTGGGCCCAGCTCGCAGCC +
Preference number: 2 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTLWARE*WAQLAA
Trigger: GGCTGCGAGCTGGGCCCATCACTCTCGAGCCCACAG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR GCA 90 bp AAGCAGACGGTGACCTTGGCGAAGGGGCGGCTGGCCATCTTGGTCATCTCCTGCCATCTTACTTGTGTGTaGACATGTGCATGTGTTCAT +
Preference number: 2 (lower is better)
Translates to: KQTVTLAKGRLAILVISCHLTCV*TCACVH
Trigger: ATGAACACATGCACATGTGCACACACAAGTAAGATG...GCAGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCAAGGTCACCGTCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR GCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGCCAGACTCCCTCATTaGCAGCACCCTACTCCAGCC +
Preference number: 2 (lower is better)
Translates to: CACALIVSLHQNLSPMRSARLPH*QHPTPA
Trigger: GGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGC...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGTGACCCAGCTGCTGTaGATGAGAACCCTGGGCATG +
Preference number: 2 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIVTQLL*MRTLGM
Trigger: CATGCCCAGGGTTCTCATCCACAGCAGCTGGGTCAC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGGGAACCTCGTCTCTTaGTTCCTGCTTTGCCCCACG +
Preference number: 2 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIGNLVS*FLLCPT
Trigger: CGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR TCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTTCGATAAATAGCTGCTaGATGCAGAACAAAGGAGGC +
Preference number: 2 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPSINSC*MQNKGG
Trigger: GCCTCCTTTGTTCTGCATTCAGCAGCTATTTATCGA...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR TCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAATGTGTGCATGTGCACTaGTTGTCTCCCTTCACCAGA +
Preference number: 2 (lower is better)
Translates to: SPVPPGASDGSLGKGESQCVHVH*LSPFTR
Trigger: TCTGGTGAAGGGAGACAATCAGTGCACATGCACACA...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR TCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTATCCCTAGTTGGACCTaGGTGAAGAGATGTCTGAAG +
Preference number: 2 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPIPSWT*VKRCLK
Trigger: CTTCAGACATCTCTTCACTCAGGTCCAACTAGGGAT...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACCTCAGTGGCCCCCATaGCCACCTGGGGTGGGATCT +
Preference number: 2 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTPQWPP*PPGVGS
Trigger: AGATCCCACCCCAGGTGGGCATGGGGGCCACTGAGG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR GCA 90 bp AAGAAGACGGAGAAGAAGACAAACAGGTCAATGTGGGCCTGGTCCTGCCGGAAGTTGGTGAATTTGGGCTaGACGCCAAAGAGGACAGTG +
Preference number: 2 (lower is better)
Translates to: KKTEKKTNRSMWAWSCRKLVNLG*TPKRTV
Trigger: CACTGTCCTCTTTGGCGTGCAGCCCAAATTCACCAA...CTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGTCTTCTTCTCCGTCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACCATCTGGGCAACCCTaGGGGAAGGGGGCCAGTGGT +
Preference number: 2 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTPSGQP*GKGASG
Trigger: ACCACTGGCCCCCTTCCCCCAGGGTTGCCCAGATGG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR TCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTTCGATAAATAGCTGCTaGATGCAGAACAAAGGAGGC +
Preference number: 2 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPSINSC*MQNKGG
Trigger: GCCTCCTTTGTTCTGCATTCAGCAGCTATTTATCGA...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR TCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGAACTCTTGACCTTGTaGTCAGCCCACCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: CACALIVSLHQNLSPMRSELLTL*SAHLGL
Trigger: GAGGCCAAGGTGGGCTGATCACAAGGTCAAGAGTTC...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR TCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACTCGATAAATAGCTGCTaGATGCAGAACAAAGGAGGC +
Preference number: 2 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHSINSC*MQNKGG
Trigger: GCCTCCTTTGTTCTGCATTCAGCAGCTATTTATCGA...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCTGTCTCTTTCCAGCTaGTTCCCTCGCCAGCGCTAT +
Preference number: 2 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSLSLSS*FPRQRY
Trigger: ATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCTGGGCTGTCTCAGGGTaGCATCTGTCTCTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSWAVSG*HLSLSS
Trigger: GCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCA...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGTGATCAGCCCACCTTaGCCTCTCAAAGTGCTAGGA +
Preference number: 2 (lower is better)
Translates to: CACALIVSLHQNLSPMRSVISPP*PLKVLG
Trigger: TCCTAGCACTTTGAGAGGCCAAGGTGGGCTGATCAC...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGTGATCAGCCCACCTTaGCCTCTCAAAGTGCTAGGA +
Preference number: 2 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSVISPP*PLKVLG
Trigger: TCCTAGCACTTTGAGAGGCCAAGGTGGGCTGATCAC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR GCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCATCTAGCTTCTTTGAATaGCCAGCTGACTTCACCCCA +
Preference number: 2 (lower is better)
Translates to: CACALIVSLHQNLSPMRSSSFFE*PADFTP
Trigger: TGGGGTGAAGTCAGCTGGGCATTCAAAGAAGCTAGA...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR GCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACTCTAGCTTCTTTGAATaGCCAGCTGACTTCACCCCA +
Preference number: 2 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHSSFFE*PADFTP
Trigger: TGGGGTGAAGTCAGCTGGGCATTCAAAGAAGCTAGA...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR TCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAAACAGGGCTGTGCACTaGCGGTACCGGCATTTTCAT +
Preference number: 2 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTNRAVH*RYRHFH
Trigger: ATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTT...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR TCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCTCGATAAATAGCTGCTaGATGCAGAACAAAGGAGGC +
Preference number: 2 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSSINSC*MQNKGG
Trigger: GCCTCCTTTGTTCTGCATTCAGCAGCTATTTATCGA...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR TCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAGTGCTTCTCCCTCTCTaGAGCCATCTTACTTGTGTG +
Preference number: 2 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTVLLPL*SHLTCV
Trigger: CACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCAC...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR CCA 72 bp TGCCAGGAAGGGCTCAGAGCGGCGGAAGGCGGGAGGTaGGAGCCCAGCCGGCTTCCAGGCGGAGGCCGGGGC +
Preference number: 3 (lower is better)
Translates to: CQEGLRAAEGGR*EPSRLPGGGRG
Trigger: GCCCCGGCCTCCGCCTGGAAGCCGGCTGGGCTCCCACCTCCCGCCTTCCGCCGCTCTGAGCCCTTCCTGGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR TCA 72 bp GTCCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTaGGCCGTTGGCGCCGGGCCCACTTGGGTCTCCCAC +
Preference number: 3 (lower is better)
Translates to: VLPEEEQALRVG*AVGAGPTWVSH
Trigger: GTGGGAGACCCAAGTGGGCCCGGCGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR TCA 72 bp GTACTCGTGCAGCCTGTGCCGCAGTGTGACGAGGGCTaGCCCCAGGCAGGCGCCGTTGGGTGCATGGGGCCC +
Preference number: 3 (lower is better)
Translates to: VLVQPVPQCDEG*PQAGAVGCMGP
Trigger: GGGCCCCATGCACCCAACGGCGCCTGCCTGGGGTCAGCCCTCGTCACACTGCGGCACAGGCTGCACGAGTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR CCA 72 bp GGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTaGCGCCGGGCCCACTTGGGTCTCCCACGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: GRRAGPASRLSR*RRAHLGLPRPA
Trigger: TGCTGGGCGTGGGAGACCCAAGTGGGCCCGGCGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR GCA 72 bp GACCAGCCGGTCCCGCACGCCGCGGACCACCAGCACTaGCGACGGCTCCGTCACCGTCACGTAGGTAATCAG +
Preference number: 3 (lower is better)
Translates to: DQPVPHAADHQH*RRLRHRHVGNQ
Trigger: CTGATTACCTACGTGACGGTGACGGAGCCGTCGGCAGTGCTGGTGGTCCGCGGCGTGCGGGACCGGCTGGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CAA 90 bp AAGCAGACGGTGACCTTGGCGAAGGGGCGGCTGGCCATCTTGGTCATCTCCTGCTGGCGCCGGGCCCACTaGGGTCTCCCACGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: KQTVTLAKGRLAILVISCWRRAH*GLPRPA
Trigger: TGCTGGGCGTGGGAGACCCAAGTGGGCCCGGCGCCA...GCAGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCAAGGTCACCGTCTGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR TCA 72 bp CCACGCCAGCCATGCCATCTTCTGTGGGCTCGAGAGTaGTGGGCCCAGCTCGCAGCCCAGCAGTGGTGGCGG +
Preference number: 3 (lower is better)
Translates to: PRQPCHLLWARE*WAQLAAQQWWR
Trigger: CCGCCACCACTGCTGGGCTGCGAGCTGGGCCCATCACTCTCGAGCCCACAGAAGATGGCATGGCTGGCGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CAA 90 bp ATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCCCCAGGCAGGCGCCGTaGGGTGCATGGGGCCCGCCA +
Preference number: 3 (lower is better)
Translates to: MSEGHAGEVVLAQQSLPAPRQAP*GAWGPP
Trigger: TGGCGGGCCCCATGCACCCAACGGCGCCTGCCTGGG...GGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR CCA 72 bp GTAGAAGCGGCTCGACTTGAGGGCATGGTGCTCGTGTaGGTAGGTGATGACCAGCCGGTCCCGCACGCCGCG +
Preference number: 3 (lower is better)
Translates to: VEAARLEGMVLV*VGDDQPVPHAA
Trigger: CGCGGCGTGCGGGACCGGCTGGTCATCACCTACCCACACGAGCACCATGCCCTCAAGTCGAGCCGCTTCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CAA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGTCTGTTGTTCCAGCTTaGCTGTGTGACCCTGGTCCC +
Preference number: 3 (lower is better)
Translates to: RGQESKEVAQVRGGASGESVVPA*LCDPGP
Trigger: GGGACCAGGGTCACACAGCAAAGCTGGAACAACAGA...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR GCA 72 bp CCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTaGTGCCCCTCTTGTCCCTCCGGTCCATTCTCCACA +
Preference number: 3 (lower is better)
Translates to: PHCQHPTPAHHP*CPSCPSGPFST
Trigger: TGTGGAGAATGGACCGGAGGGACAAGAGGGGCAGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR CCA 72 bp CAGGGGCCACACGGACCACGAAGGTGTCATAGGAGGTaGAGACATAGAGGTCCACGGCCCCGAAGGTCACGT +
Preference number: 3 (lower is better)
Translates to: QGPHGPRRCHRR*RHRGPRPRRSR
Trigger: ACGTGACCTTCGGGGCCGTGGACCTCTATGTCTCCACCTCCTATGACACCTTCGTGGTCCGTGTGGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR CCA 72 bp TGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTaGCTCAACAGTCCCTTCCGGCCCGCACCAGTCCCA +
Preference number: 3 (lower is better)
Translates to: WACQRDMLVRLS*LNSPFRPAPVP
Trigger: TGGGACTGGTGCGGGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CAA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGTCCCTGCTGCCCCTCTaGTCCCTCCGGTCCATTCTC +
Preference number: 3 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVSLLPL*SLRSIL
Trigger: GAGAATGGACCGGAGGGACAAGAGGGGCAGCAGGGA...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CAA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCACAACACGCCTCTGTaGTTCCAGCTTTGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: RGQESKEVAQVRGGASGEHNTPL*FQLCCV
Trigger: CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR TCA 72 bp AGGTCACGTCCAGCGTCAGGCGGATGTCCACGTTGGTaGATTTGGGCTGCACGCCAAAGAGGACAGTGCGGC +
Preference number: 3 (lower is better)
Translates to: RSRPASGGCPRW*IWAARQRGQCG
Trigger: GCCGCACTGTCCTCTTTGGCGTGCAGCCCAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR TCA 72 bp GATGAGAACCCTGGGCATGTCAGAGGGACATGCTGGTaGGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCCG +
Preference number: 3 (lower is better)
Translates to: DENPGHVRGTCW*GCPGSTVPSGP
Trigger: CGGGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAGGGTTCTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR GCA 72 bp CCTGGGGGTCCTATTCACCTCTGGGCTGTCTCAGGGTaGCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAG +
Preference number: 3 (lower is better)
Translates to: PGGPIHLWAVSG*HLSLSSCFPRQ
Trigger: CTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAATAGGACCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR CCA 72 bp CTGATGTGGTCCCCACCACCTCTGACATGCACGCATTaGCTAGGGCCTCTCACACTGAGGCTCCACGCGAAG +
Preference number: 3 (lower is better)
Translates to: LMWSPPPLTCTH*LGPLTLRLHAK
Trigger: CTTCGCGTGGAGCCTCAGTGTGAGAGGCCCTAGCCAATGCGTGCATGTCAGAGGTGGTGGGGACCACATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CAA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGATCCCTGCTGCCCCTCTaGTCCCTCCGGTCCATTCTC +
Preference number: 3 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGSLLPL*SLRSIL
Trigger: GAGAATGGACCGGAGGGACAAGAGGGGCAGCAGGGA...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR GCA 72 bp GAGAAGAAGACAAACAGGTCAATGTGGGCCTGGTCCTaGCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAG +
Preference number: 3 (lower is better)
Translates to: EKKTNRSMWAWS*RKKSRPCESAE
Trigger: CTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGTCTTCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CAA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCTCTCAGGCAGAGGTTTaGTCCCCTCTGAGGCTCCCC +
Preference number: 3 (lower is better)
Translates to: QAALSGTGLCTDGTGIFISQAEV*SPLRLP
Trigger: GGGGAGCCTCAGAGGGGACAAAACCTCTGCCTGAGA...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CAA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGATCTCAGGCAGAGGTTTaGTCCCCTCTGAGGCTCCCC +
Preference number: 3 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGSQAEV*SPLRLP
Trigger: GGGGAGCCTCAGAGGGGACAAAACCTCTGCCTGAGA...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CAA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTTCCACGTTGGTGAATTaGGGCTGCACGCCAAAGAGG +
Preference number: 3 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSSTLVN*GCTPKR
Trigger: CCTCTTTGGCGTGCAGCCCAAATTCACCAACGTGGA...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR GCA 72 bp GGGCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATaGAAAGTCCAGTCCCTCCAGGAGCTAGTGATGGAA +
Preference number: 3 (lower is better)
Translates to: GPLTLRLHAKGR*KVQSLQELVME
Trigger: TTCCATCACTAGCTCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR CCA 72 bp AAGACGGAGAAGAAGACAAACAGGTCAATGTGGGCCTaGTCCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCG +
Preference number: 3 (lower is better)
Translates to: KTEKKTNRSMWA*SCRKKSRPCES
Trigger: CGACTCGCAGGGCCTGCTCTTCTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGTCTTCTTCTCCGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR TCA 72 bp GTTGTTCCAGCTTTGCTGTGTGACCCTGGTCCCCGGTaGGGTAACACCACCACTGAGCTTTATCCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: VVPALLCDPGPR*GNTTTELYPCS
Trigger: GCTGCAGGGATAAAGCTCAGTGGTGGTGTTACCTCACCGGGGACCAGGGTCACACAGCAAAGCTGGAACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CAA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCTGAAGCCATCTTACTaGTGTGTGCACATGTGCATG +
Preference number: 3 (lower is better)
Translates to: SEPDSLIASTLLQPTIPALKPSY*CVHMCM
Trigger: CATGCACATGTGCACACACAAGTAAGATGGCTTCAG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CAA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCTGAAGCCATCTTACTaGTGTGTGCACATGTGCATG +
Preference number: 3 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVLKPSY*CVHMCM
Trigger: CATGCACATGTGCACACACAAGTAAGATGGCTTCAG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR-3UTR CAA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAATGGGGTTTCACCATATaGGCCAGGCTGGTCACGAAC +
Preference number: 3 (lower is better)
Translates to: SPVPPGASDGSLGKGESQWGFTI*ARLVTN
Trigger: GTTCGTGACCAGCCTGGCCAATATGGTGAAACCCCA...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR GCA 72 bp ATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTaGCCCACGCCTATGACAGTGCCTGACAGAGTAGGT +
Preference number: 3 (lower is better)
Translates to: MRSGNLVSWFLL*PTPMTVPDRVG
Trigger: ACCTACTCTGTCAGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR CCA 72 bp AACCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTaGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCT +
Preference number: 3 (lower is better)
Translates to: NLSPMRSGNLVS*FLLCPTPMTVP
Trigger: AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR-3UTR CAA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGGCGGATGTCCACGTaGGTGAATTTGGGCTGCACG +
Preference number: 3 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIRRMST*VNLGCT
Trigger: CGTGCAGCCCAAATTCACCAACGTGGACATCCGCCT...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR-3UTR CAA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCTCTCAGGCAGAGGTTTaGTCCCCTCTGAGGCTCCCC +
Preference number: 3 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSSQAEV*SPLRLP
Trigger: GGGGAGCCTCAGAGGGGACAAAACCTCTGCCTGAGA...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR TCA 72 bp ACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTaGAGCCATCTTACTTGTGTGTGCACATGTGCATGT +
Preference number: 3 (lower is better)
Translates to: TSSGGLTVLLPL*SHLTCVCTCAC
Trigger: ACATGCACATGTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR TCA 72 bp ATGTCTGAAGGGCATCTCATGTCAAGAACCAGACTCTaGTCTTCCTCACAAGCCTCAGTCTGCCCCATTCAA +
Preference number: 3 (lower is better)
Translates to: MSEGHLMSRTRL*SSSQASVCPIQ
Trigger: TTGAATGGGGCAGACTGAGGCTTGTGAGGAAGATCAGAGTCTGGTTCTTGACATGAGATGCCCTTCAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR CAA 72 bp CGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTaGGCGCCGGGCCCACTTGGGTCTCCCACGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RKKSRPCESAEP*APGPLGSPTPS
Trigger: GCTGGGCGTGGGAGACCCAAGTGGGCCCGGCGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCGCACCAGCCCAGGGTaGCAGGTCCCCGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQRTSPG*QVPVEG
Trigger: CCCCTCCACGGGGACCTGGCACCCTGGGCTGGTGCG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCGCAGGCGCCGTTGGGTaGATGGGGCCCGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGAGAVG*MGPARQ
Trigger: CTGCCTGGCGGGCCCCATGCACCCAACGGCGCCTGC...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCTGGTCCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTGGCGCAGTCCCATGCCCACTaGCCCCAGCACCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: AWSCRKKSRPCESAEPLAQSHAH*PQHPHH
Trigger: GTGGTGGGGGTGCTGGGGGCAGTGGGCATGGGACTG...CGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGGACCAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGGAAGGAGCGGGGCGATaGGCCTGGGCCCCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQEGAGR*AWAPVL
Trigger: GAGGACGGGGGCCCAGGCCCATCGCCCCGCTCCTTC...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGCCACGCCAGCCATGCCATCTTCTGTGGGCTCGAGAGTGATGGGCCCAGCTCGGGCGCCGGGCCCACTTaGGTCTCCCACGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GHASHAIFCGLESDGPSSGAGPT*VSHAQQ
Trigger: CTGCTGGGCGTGGGAGACCCAAGTGGGCCCGGCGCC...CGAGCTGGGCCCATCACTCTCGAGCCCACAGAAGATGGCATGGCTGGCGTGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR TCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCAGAGGCCGAGCGGGTaGGGTCGGGCAGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQQRPSG*GRAEAR
Trigger: CCTGGCTTCTGCCCGACCTCACCCGCTCGGCCTCTG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGGCCTGTGCCGCAGTGTaGCGAGGGCTGACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQACAAV*RGLTPG
Trigger: GCCTGGGGTCAGCCCTCGTCACACTGCGGCACAGGC...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCCCGGTGGCTGGCACTaGCCGTGGCTCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQPGGWH*PWLWQP
Trigger: TGGCTGCCAGAGCCACGGGCAGTGCCAGCCACCGGG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTGGCGCCGGGCCAACAGCGGGAGGCACTaGTCACAGTGGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: PAGRRAGPASRLSRWRRANSGRH*SQWLPL
Trigger: CAAGGGCAGCCACTGTGAGCAGTGCCTCCCGCTGTT...GGCCCGGCGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR GCA 90 bp CCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTGGCGCCGGGCCTACTCGTGCAGCCTGTaGCGCAGTGTGACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PAGRRAGPASRLSRWRRAYSCSL*RSVTRA
Trigger: AGCCCTCGTCACACTGCGGCACAGGCTGCACGAGTA...GGCCCGGCGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCCATGGAGTGGCCAGTaGCAGCAGGGGGCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGPWSGQ*QQGAVR
Trigger: GCGGACGGCCCCCTGCTGCCACTGGCCACTCCATGG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCATGGAGTGGCCAGTaGCAGCAGGGGGCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEPWSGQ*QQGAVR
Trigger: GCGGACGGCCCCCTGCTGCCACTGGCCACTCCATGG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCCAGGCCCAGGCAGCTaGCGGCTGGACAAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQPGPGS*RLDKPP
Trigger: TGGGGGCTTGTCCAGCCGCCAGCTGCCTGGGCCTGG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCCGCCCTGGCGCAGGTaGCAGGTGGCACTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGPPWRR*QVALVR
Trigger: CCTGACCAGTGCCACCTGCCACCTGCGCCAGGGCGG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCGTCATCCCCGCAATaGGCTCCGCCCTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEPSSPQ*APPWRR
Trigger: CCTGCGCCAGGGCGGAGCCCATTGCGGGGATGACGG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGGGCGGGGATGGCTGGTaGGCAGCAGCCCCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEGGDGW*AAAPSH
Trigger: ATGGGAGGGGGCTGCTGCCCACCAGCCATCCCCGCC...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCAGTGGTGGCGGGGATaGCTGGTGGGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEQWWRG*LVGSSP
Trigger: GGGGCTGCTGCCCACCAGCCATCCCCGCCACCACTG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCTGGTCCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTGGCGGGGCCCACAAGGCCCTaGGTGATCCAGCCCCTGACT +
Preference number: 4 (lower is better)
Translates to: AWSCRKKSRPCESAEPLAGPTRP*VIQPLT
Trigger: AGTCAGGGGCTGGATCACCCAGGGCCTTGTGGGCCC...CGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGGACCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR TCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCTGAGGACACGTTGGTaGGGAGGGCGCGACCCCCAC +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGLRTRW*GGRDPH
Trigger: GTGGGGGTCGCGCCCTCCTCACCAACGTGTCCTCAG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCCCACTCTGGGCTCCTaGCACCCAGGTGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQPTLGS*HPGAGC
Trigger: GCAACCGGCACCTGGGTGTCAGGAGCCCAGAGTGGG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCACTCTGGGCTCCTaGCACCCAGGTGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEPTLGS*HPGAGC
Trigger: GCAACCGGCACCTGGGTGTCAGGAGCCCAGAGTGGG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGTTCCCGGAACCCCCATaGCCCAGGCTGCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEFPEPP*PRLLPR
Trigger: CCTGGGGAGCAGCCTGGGTCATGGGGGTTCCGGGAA...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGGTGGGAAGCAGACGGTaGCCTTGGCGAAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQVGSRR*PWRRGG
Trigger: GCCGCCCCTTCGCCAAGGTCACCGTCTGCTTCCCAC...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCTCCAGCAGGATCCGGTaGTGGGGGCTTGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGSSRIR*WGLGAS
Trigger: CGAGGCCCCAAGCCCCCAGCACCGGATCCTGCTGGA...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGGGGGCCGTCCGCCTaGCGGAATCACCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGRGPSA*RNHLLP
Trigger: TGGGAGCAGGTGATTCCGGCAGGCGGACGGCCCCCT...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGAGGGGGCCGTCCGCCTaGCGGAATCACCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGERGPSA*RNHLLP
Trigger: TGGGAGCAGGTGATTCCGGCAGGCGGACGGCCCCCT...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGGCTGCACGGAGAGGATaGGGCGGGTCTCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEAARRG*GGSPLS
Trigger: GGACAGGGGAGACCCGCCGCATCCTCTCCGTGCAGC...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTGGCGCCGGGCCATTCACTGTGGCGGTTaGAGCGGCATTCCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PAGRRAGPASRLSRWRRAIHCGG*SGIPWS
Trigger: GCTCCACGGAATGCCGCTGCAACCGCCACAGTGAAT...GGCCCGGCGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCCGGTGCTGGGGGCTTaGGGCCTCGATGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGPVLGA*GLDEPL
Trigger: GAGTGGCTCATCGAGGCCCCAAGCCCCCAGCACCGG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGTGCCAGCAGCCCTGGTaGGGACAGGAAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGECQQPW*GQEGAS
Trigger: GCTGGCGCCTTCCTGTCCCCACCAGGGCTGCTGGCA...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCGGCCGGTGTCCACCATaGACCAGCAGGGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGGRCPP*TSRARE
Trigger: CTCCCGTGCCCTGCTGGTCCATGGTGGACACCGGCC...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCCTGCAGCACCGTCCTaGGGCACGCATTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGPAAPS*GTHSWG
Trigger: CCCCCAGGAATGCGTGCCCCAGGACGGTGCTGCAGG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAGCCCGCCATCCAGCTTaGTGGCGCAGTCGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASARHPA*WRSRGP
Trigger: GGGGCCCCGACTGCGCCACCAAGCTGGATGGCGGGC...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGGCACACCAGCCGCAATaGGGGCGCCGCAGGCACAAG +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQAHQPQ*GRRRHK
Trigger: CTTGTGCCTGCGGCGCCCCCATTGCGGCTGGTGTGC...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTGGCGCCGGGCCCGGCGTTTGGGCTCATaGAAGCAGTTGGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PAGRRAGPASRLSRWRRARRLGS*KQLVWD
Trigger: GTCCCAGACCAACTGCTTCCATGAGCCCAAACGCCG...GGCCCGGCGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR TCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGACCCTCTACCCGGGGTaGGGCCCTGCAAATGCGACC +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGETLYPG*GPANAT
Trigger: GGTCGCATTTGCAGGGCCTCACCCCGGGTAGAGGGT...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTGGGCCAGCCCAGCCCTaGGGACATCGGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSGPAQP*GHRQSP
Trigger: GGGGCTCTGCCGATGTCCTCAGGGCTGGGCTGGCCC...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGGGCCAGCCCAGCCCTaGGGACATCGGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVGPAQP*GHRQSP
Trigger: GGGGCTCTGCCGATGTCCTCAGGGCTGGGCTGGCCC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCGGGCAGTAAGGGTGTaGCCAGCAACGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQRAVRV*PATAGS
Trigger: GCTGCCAGCCGTTGCTGGTCACACCCTTACTGCCCG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCGGGCAGTAAGGGTGTaGCCAGCAACGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGRAVRV*PATAGS
Trigger: GCTGCCAGCCGTTGCTGGTCACACCCTTACTGCCCG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCCTGCTCCACCGAGATaGGGCGGTAGCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQPAPPR*GGSTAG
Trigger: GCCAGCAGTGCTACCGCCTCATCTCGGTGGAGCAGG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAGCCTGTGCCGCAGTGTaGCGAGGGCTGACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASACAAV*RGLTPG
Trigger: GCCTGGGGTCAGCCCTCGTCACACTGCGGCACAGGC...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCTGGCACTCACGTTGTaGCACCACCCAGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGELALTL*HHPAPW
Trigger: CCAGGGGGCTGGGTGGTGGCACAACGTGAGTGCCAG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCTGGCACTCACGTTGTaGCACCACCCAGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQLALTL*HHPAPW
Trigger: CCAGGGGGCTGGGTGGTGGCACAACGTGAGTGCCAG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCGGTCCCAGGAGGGGGTaGAGCTTGGCAGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGGPRRG*SLAGSL
Trigger: CAAGGAGCCTGCCAAGCTGCACCCCCTCCTGGGACC...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCACAGTGCCTGAGATCTaGTCCCCTCGGCAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGTVPEI*SPRQRA
Trigger: GGCCCGCTGCCGAGGGGAGCAGATCTCAGGCACTGT...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGGCCACAGCCCTGGTCTaGCAAGCAGCCCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQATALV*QAAQAG
Trigger: TCCTGCCTGGGCTGCTTGGCAGACCAGGGCTGTGGC...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGCCAGGCCCGGCTCTTaGAGCCCCGCCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVARPGS*SPATWR
Trigger: CCTCCAGGTGGCGGGGCTGCAAGAGCCGGGCCTGGC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCGCGGCTCCCGACTGCTaGCACAGCATGGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGAAPDC*HSMGHR
Trigger: TCTGTGGCCCATGCTGTGGCAGCAGTCGGGAGCCGC...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTAGGGGGCAGGGTCAGTaGCAGCAGGCGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSRGQGQ*QQAAQG
Trigger: GCCCTGGGCCGCCTGCTGGCACTGACCCTGCCCCCT...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCTGGTCCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTGGCGAAGAAGAGCAGGCCCTaGGAGTCGGCTGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: AWSCRKKSRPCESAEPLAKKSRP*ESAEPL
Trigger: CAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTT...CGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGGACCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGTGCAAGTGCCGGCGCTaGTCCTGCCGCTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGECKCRR*SCRWSR
Trigger: TCTGGACCAGCGGCAGGAGCAGCGCCGGCACTTGCA...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGCAGGCGCCGTTGGGTaGATGGGGCCCGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVAGAVG*MGPARQ
Trigger: CTGCCTGGCGGGCCCCATGCACCCAACGGCGCCTGC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGTCCTGGGTGCAGGCGTaGCAGTCCCGATGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGESWVQA*QSRCSS
Trigger: CGAGGAGCATCGGGACTGCCACGCCTGCACCCAGGA...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCTCGACAGCCCCCGTGTaGGTACCGGGCCAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGSTAPV*VPGQVG
Trigger: GCCTACTTGGCCCGGTACCCACACGGGGGCTGTCGA...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGGGTGCAGGAAGCGGCTaGCAGTGTCGGCTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEGAGSG*QCRLRG
Trigger: GCCTCTCAGCCGACACTGCCAGCCGCTTCCTGCACC...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCCCAGCAGATACATaGCACCACGGCCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEPPADT*HHGQRA
Trigger: TGCCCGCTGGCCGTGGTGCCATGTATCTGCTGGGGG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAGGCGGGGATGGCTGGTaGGCAGCAGCCCCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASGGDGW*AAAPSH
Trigger: ATGGGAGGGGGCTGCTGCCCACCAGCCATCCCCGCC...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp ACGGCCCCGAAGGTCACGTCCAGCGTCAGGCGGATGTCCACGTTGGTGAATTTGGCGCCGTTGGGTGCATaGGGCCCGCCAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TAPKVTSSVRRMSTLVNLAPLGA*GPPGSW
Trigger: CCAGCTGCCTGGCGGGCCCCATGCACCCAACGGCGC...CAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTCGGGGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAGGCTCAGGTGCGGGGTaGCGCCTCAGGAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASGSGAG*RLRRAQ
Trigger: CTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCC...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
3UTR CAA 72 bp CAGACGGTGACCTTGGCGAAGGGGCGGCTGGCCATCTaGGTCATCTCCTGCAAGTGCCGGCGCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QTVTLAKGRLAI*VISCKCRRCSC
Trigger: GCAGGAGCAGCGCCGGCACTTGCAGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCAAGGTCACCGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR TCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGGGCTTGGGGCCTCGATaGGCCACTCGCAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEGLGPR*ATRSCH
Trigger: ATGGCAACTGCGAGTGGCTCATCGAGGCCCCAAGCC...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCGGCTTGGGGCCTCGATaGGCCACTCGCAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGGLGPR*ATRSCH
Trigger: ATGGCAACTGCGAGTGGCTCATCGAGGCCCCAAGCC...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCGCAGAAGGCAGCTATaGGGCTGCGGTCCGACTGGA +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQRRRQL*GCGPTG
Trigger: TCCAGTCGGACCGCAGCCTCATAGCTGCCTTCTGCG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGGGCCAGCCCAGCCCTaGGGACATCGGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSGPAQP*GHRQSP
Trigger: GGGGCTCTGCCGATGTCCTCAGGGCTGGGCTGGCCC...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGAGAGGCGGCTGTCCATaGGGGTCTCCCAGACCAGCT +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQRGGCP*GSPRPA
Trigger: AGCTGGTCTGGGAGACCCTCATGGACAGCCGCCTCT...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGTCTCGCTTTGCCCCCTaGGAAGGGGCCAGCAGACTC +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGESRFAP*EGASRL
Trigger: GAGTCTGCTGGCCCCTTCTCAGGGGGCAAAGCGAGA...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGCCTCCCGCAGCACCTaGCGCTGCCCCTTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVASRST*RCPLQS
Trigger: GGACTGCAAGGGGCAGCGGCAGGTGCTGCGGGAGGC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCGCAGGTGCCGTGGCTaGCACAGTAGGCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQRRCRG*HSRLST
Trigger: AGTGCTCAGCCTACTGTGGCAGCCACGGCACCTGCG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGGGGCGAGGCGCAGGTaGCGTGGCTGCCACAGTAGG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVGARRR*RGCHSR
Trigger: CCTACTGTGGCAGCCACGGCACCTGCGCCTCGCCCC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAACCACTGGGAGGCGCTaGTCGGCCCTCAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASTTGRR*SALRGS
Trigger: GGAACCCCTGAGGGCCGAGCAGCGCCTCCCAGTGGT...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCTCCTTGGCACCAACTaGATTCCGGGTCCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGELLGTN*IPGPGS
Trigger: GCTCCCGGGACCCGGAATGCAGTTGGTGCCAAGGAG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAGCTGTGCCCAGGGCCTaGCGAGCCATTGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASAVPRA*RAIELA
Trigger: GGCCAGCTCAATGGCTCGGCAGGCCCTGGGCACAGC...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGAGAGTTAGCTCGCTGTaGCCAGGGCCTGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGERVSSL*PGPAEP
Trigger: TGGCTCGGCAGGCCCTGGGCACAGCGAGCTAACTCT...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGCCCCGCCGGCTGCATaGCGCGTCCCCTTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSAPPAA*RVPFAA
Trigger: AGCCGCAAAGGGGACGCGGCATGCAGCCGGCGGGGC...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGGGGCACATATGCGGCTaGATGGAAGGAGCGGGGCGA +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEGHICG*MEGAGR
Trigger: TCGCCCCGCTCCTTCCATGCAGCCGCATATGTGCCC...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGGCCAGCGGGCACATATaGGGCTGCATGGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQASGHI*GCMEGA
Trigger: CGCTCCTTCCATGCAGCCGCATATGTGCCCGCTGGC...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCACCCAGGTGCCGGTTaGCAGCTGGTACTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGHPGAG*QLVLQQ
Trigger: CTGCTGGAGTACCAGCTGGCAACCGGCACCTGGGTG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCAGCAGACTCCAGGTaGGGTCAGGACAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEPADSR*GQDSAG
Trigger: CCCTGCACTGTCCTGACCGCACCTGGAGTCTGCTGG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCCCTCCCGCGTGCACTaGTCGCAGTCAGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAPSRVH*SQSAAP
Trigger: CGGGGCTGCTGACTGCGAGCAGTGCACGCGGGAGGG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGACTTGCCCTCCCGCGTaGACTGCTCGCAGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGETCPPA*TARSQQ
Trigger: CTGCTGACTGCGAGCAGTGCACGCGGGAGGGCAAGT...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGGCGTCCACATGCACTTaGCCTCCCGCGTGCACTGCT +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQASTCT*PPACTA
Trigger: AGCAGTGCACGCGGGAGGGCAAGTGCATGTGGACGC...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTCGCCAAAGAGGACAGTaGGGCCGGGGCCTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSRQRGQ*GRGLAP
Trigger: GGGCGCTAGGCCCCGGCCGCACTGTCCTCTTTGGCG...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCACCGTACCCGTGGCTCTaGTGGGGCGCCCGGCCCACT +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPPYPWL*WGARPT
Trigger: AGTGGGCCGGGCGCCCCAGCAGAGCCACGGGTACGG...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGCCCGCACCAGTCCCATaGCCACTGCCCCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVPAPVP*PLPPAP
Trigger: GGGTGCTGGGGGCAGTGGGCATGGGACTGGTGCGGG...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCCAGGCCCAGGCAGCTaGCGGCTGGACAAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAPGPGS*RLDKPP
Trigger: TGGGGGCTTGTCCAGCCGCCAGCTGCCTGGGCCTGG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACACGTCCTCAGCCCCTaGTCCACCTGGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASHVLSP*STWPSR
Trigger: CCTGGAGGGCCAGGTGGACCAGGGGCTGAGGACGTG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTCCGCCCTGGCGCAGGTaGCAGGTGGCACTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSPPWRR*QVALVR
Trigger: CCTGACCAGTGCCACCTGCCACCTGCGCCAGGGCGG...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTCCGTCATCCCCGCAATaGGCTCCGCCCTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSPSSPQ*APPWRR
Trigger: CCTGCGCCAGGGCGGAGCCCATTGCGGGGATGACGG...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGTCACAGAAGGGGTCCTaGGTGCAGGCGTGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQSQKGS*VQAWQS
Trigger: GGACTGCCACGCCTGCACCCAGGACCCCTTCTGTGA...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGTGGCACCAGGCGCACTaGCTAGAGTTGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEWHQAH*LELARQ
Trigger: CTGCCTGGCCAACTCTAGCCAGTGCGCCTGGTGCCA...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCCCACAAAGCCAAAGTaGCAGCGGCAGTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGPTKPK*QRQWSG
Trigger: GCCCGACCACTGCCGCTGCCACTTTGGCTTTGTGGG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGTGGAGGTGGTGGGGCTaGGGGTGGCTGGATGTGTAC +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQWRWWG*GWLDVY
Trigger: GTACACATCCAGCCACCCCCAGCCCCACCACCTCCA...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCTGGAGGTGGTGGGGCTaGGGGTGGCTGGATGTGTAC +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGWRWWG*GWLDVY
Trigger: GTACACATCCAGCCACCCCCAGCCCCACCACCTCCA...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTTACCCGTGGCTCTGCTaGGGCGCCCGGCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAYPWLC*GARPTA
Trigger: AGCAGTGGGCCGGGCGCCCCAGCAGAGCCACGGGTA...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTTACCTCCCGTACCCGTaGCTCTGCTGGGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSYLPYP*LCWGAR
Trigger: CCGGGCGCCCCAGCAGAGCCACGGGTACGGGAGGTA...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCAGTGGTGGCGGGGATaGCTGGTGGGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAQWWRG*LVGSSP
Trigger: GGGGCTGCTGCCCACCAGCCATCCCCGCCACCACTG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTGCAGCCCAGCAGTGGTaGCGGGGATGGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSAAQQW*RGWLVG
Trigger: GCCCACCAGCCATCCCCGCCACCACTGCTGGGCTGC...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
3UTR CAA 72 bp GGGGCAGTAGGGTCAGGTGGGAAGCAGACGGTGACCTaGGCGAAGGGGCGGCTGGCCATCTTGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: GAVGSGGKQTVT*AKGRLAILVIS
Trigger: GGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCAAGGTCACCGTCTGCTTCCCACCTGACCCTACTGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR TCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTCGCCGCCTCCTGCACTaGCCCTTAGAGCGGGGACAG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSRRLLH*PLERGQ
Trigger: CTGTCCCCGCTCTAAGGGTCAGTGCAGGAGGCGGCG...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAACGGCCACATGGGAGTaGCGGGCAGCCGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPTATWE*RAAGAG
Trigger: TCCTGCCCCGGCTGCCCGTCACTCCCATGTGGCCGT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCGGACTCCCGTGAAATaGTTCCCGGCACTTGGCGCA +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGRTPVK*FPALGA
Trigger: TGCGCCAAGTGCCGGGAATCATTTCACGGGAGTCCG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCGGACTCCCGTGAAATaGTTCCCGGCACTTGGCGCA +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGERTPVK*FPALGA
Trigger: TGCGCCAAGTGCCGGGAATCATTTCACGGGAGTCCG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCTGTGGGCTCGAGAGTaGTGGGCCCAGCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPALWARE*WAQLAA
Trigger: GGCTGCGAGCTGGGCCCATCACTCTCGAGCCCACAG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTGGCGCCGGGCCGTGCTTCTCCCTCTCTaGAGCCATCTTACTTGTGTG +
Preference number: 4 (lower is better)
Translates to: PAGRRAGPASRLSRWRRAVLLPL*SHLTCV
Trigger: CACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCAC...GGCCCGGCGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCAGACCCAATCCCTTTaGTCACCCACCCTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGQTQSL*SPTLAS
Trigger: GGAGGCGAGGGTGGGTGAGCAAAGGGATTGGGTCTG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCGGGGTGAGGCCCTaGAAATGCGACCTCTATAGG +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEPGVRP*KCDLYR
Trigger: CCTATAGAGGTCGCATTTGCAGGGCCTCACCCCGGG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGTCCAGCAGGATCCGGTaGTGGGGGCTTGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVSSRIR*WGLGAS
Trigger: CGAGGCCCCAAGCCCCCAGCACCGGATCCTGCTGGA...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCCCGGTGGCTGGCACTaGCCGTGGCTCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVPGGWH*PWLWQP
Trigger: TGGCTGCCAGAGCCACGGGCAGTGCCAGCCACCGGG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGGGGCGAGGCGCAGGTaGCGTGGCTGCCACAGTAGG +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSGARRR*RGCHSR
Trigger: CCTACTGTGGCAGCCACGGCACCTGCGCCTCGCCCC...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGTGGTTCTCCCACAGGTaGAGGTCACAGGCACGTCCC +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQWFSHR*RSQARP
Trigger: GGGACGTGCCTGTGACCTGCACCTGTGGGAGAACCA...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAGAGGAGAAGAGGTCGTaGGGGGTGCGGCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASEEKRS*GVRPPD
Trigger: GTCTGGAGGCCGCACCCCGCACGACCTCTTCTCCTC...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGCAGACCCAGGGCGCTaGAGCCGCCGCGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVADPGR*SRRVSF
Trigger: GAAGGAGACGCGGCGGCTGCAGCGCCCTGGGTCTGC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCCGGCGTGGGTCCCCGTaGCCGTTGCACTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIRRGSP*PLHWQG
Trigger: GCCCTGCCAGTGCAACGGGCACGGGGACCCACGCCG...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGCAGAGCCCCGCACCTaGAGCACCGTCCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVAEPRT*STVLGH
Trigger: GTGCCCCAGGACGGTGCTGCAGGTGCGGGGCTCTGC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGGCAGAGCCCCGCACCTaGAGCACCGTCCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLAEPRT*STVLGH
Trigger: GTGCCCCAGGACGGTGCTGCAGGTGCGGGGCTCTGC...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCCGGGGCCCACCATCTaGAGGGGGTGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVPGPTI*RGWWRW
Trigger: CCACCTCCACCACCCCCTGCAGATGGTGGGCCCCGG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCCGTACCCGTGGCTCTaGTGGGGCGCCCGGCCCACT +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIPYPWL*WGARPT
Trigger: AGTGGGCCGGGCGCCCCAGCAGAGCCACGGGTACGG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACCGTACCCGTGGCTCTaGTGGGGCGCCCGGCCCACT +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGPYPWL*WGARPT
Trigger: AGTGGGCCGGGCGCCCCAGCAGAGCCACGGGTACGG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGCGGACCACCAGCACTaGCGACGGCTCCGTCACCGT +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAADHQH*RRLRHR
Trigger: ACGGTGACGGAGCCGTCGGCAGTGCTGGTGGTCCGC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGTGGCCACGCCAGCCATaGCATCTTCTGTGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEWPRQP*HLLWAR
Trigger: TCGAGCCCACAGAAGATGGCATGGCTGGCGTGGCCA...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGCAGTCCCATGCCCACTaGCCCCAGCACCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVQSHAH*PQHPHH
Trigger: GTGGTGGGGGTGCTGGGGGCAGTGGGCATGGGACTG...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTCAGTCCCATGCCCACTaGCCCCAGCACCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSQSHAH*PQHPHH
Trigger: GTGGTGGGGGTGCTGGGGGCAGTGGGCATGGGACTG...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp ATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCCCCGCACCAGTCCCATaGCCACTGCCCCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: MSEGHAGEVVLAQQSLPAPAPVP*PLPPAP
Trigger: GGGTGCTGGGGGCAGTGGGCATGGGACTGGTGCGGG...GGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCACCCCAGGGCCTCTaGCTTTGCTTCCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEPPQGL*LCFPKL
Trigger: GAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAGGCTGGCACTGCCCGTaGCTCTGGCAGCCACCCGGG +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGGWHCP*LWQPPG
Trigger: CCCGGGTGGCTGCCAGAGCCACGGGCAGTGCCAGCC...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGAGAAGGCAGGGTCCCTaGCACTCACGTTGTGCCACC +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQRRQGP*HSRCAT
Trigger: GGTGGCACAACGTGAGTGCCAGGGACCCTGCCTTCT...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGAAGGCAGGGTCCCTaGCACTCACGTTGTGCCACC +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGRRQGP*HSRCAT
Trigger: GGTGGCACAACGTGAGTGCCAGGGACCCTGCCTTCT...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTTGCCAGCAGCCCTGGTaGGGACAGGAAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSCQQPW*GQEGAS
Trigger: GCTGGCGCCTTCCTGTCCCCACCAGGGCTGCTGGCA...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCCCAATAGCCCCCGCTaGTGCTGTCAAGGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQPNSPR*CCQGGN
Trigger: GTTTCCGCCTTGACAGCACCAGCGGGGGCTATTGGG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCATGGAGTGGCCAGTaGCAGCAGGGGGCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSPWSGQ*QQGAVR
Trigger: GCGGACGGCCCCCTGCTGCCACTGGCCACTCCATGG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGCCCTCAGGGGTTCCTaGCGGGGCAAGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVALRGS*RGKLSS
Trigger: GGAGCTGAGCTTGCCCCGCCAGGAACCCCTGAGGGC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACCAGGCAGGAAGCTCTaGGTGACGCAGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASPGRKL*VTQASR
Trigger: CCTGGAGGCCTGCGTCACCCAGAGCTTCCTGCCTGG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAAGGACGTGTAGGCGCTaGGCCCGCGTCCACACGGCC +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPRTCRR*ARVHTA
Trigger: GGCCGTGTGGACGCGGGCCCAGCGCCTACACGTCCT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCGTCCCCTTTGCGGCTaGTGCTCTGATGCCACTCAC +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGRPLCG*CSDATH
Trigger: GTGAGTGGCATCAGAGCACCAGCCGCAAAGGGGACG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGGACCCGGGGCGGGTGTaGGAGGGGGCAGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLDPGRV*EGAGLM
Trigger: CATCAGACCTGCCCCCTCCCACACCCGCCCCGGGTC...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGACCCGGGGCGGGTGTaGGAGGGGGCAGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVDPGRV*EGAGLM
Trigger: CATCAGACCTGCCCCCTCCCACACCCGCCCCGGGTC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCCCCATGTCCAGTCCTaGCACTCGTCGCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQPHVQS*HSSQKP
Trigger: TGGCTTCTGCGACGAGTGCCAGGACTGGACATGGGG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCACCGTGCCCGTTGCACTaGCAGGGCCGGCAGCCCCTA +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPPCPLH*QGRQPL
Trigger: TAGGGGCTGCCGGCCCTGCCAGTGCAACGGGCACGG...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGCAGTGGCCACGGCGTaGGTCCCCGTGCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSAVATA*VPVPVA
Trigger: TGCAACGGGCACGGGGACCCACGCCGTGGCCACTGC...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCGCCATCCAGCTTGGTaGCGCAGTCGGGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSRHPAW*RSRGPR
Trigger: TCGGGGGCCCCGACTGCGCCACCAAGCTGGATGGCG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGCCCGCCATCCAGCTTaGTGGCGCAGTCGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPARHPA*WRSRGP
Trigger: GGGGCCCCGACTGCGCCACCAAGCTGGATGGCGGGC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCGTAGAGGGAGTCGGTaGCCTCGTGGTAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGRRGSR*PRGRQQ
Trigger: CTGCTGTCTACCACGAGGCCACCGACTCCCTCTACG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAGACAAGCAGGCCCCATaGCACCAGGTGCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASDKQAP*HQVQAP
Trigger: TGGGGCCTGCACCTGGTGCCATGGGGCCTGCTTGTC...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGAAGTGGCAGCGGCAGTaGTCGGGCTCCACACATGAG +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEKWQRQ*SGSTHE
Trigger: CTCATGTGTGGAGCCCGACCACTGCCGCTGCCACTT...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCCAGCGCATTCACTGTaGCGGTTGCAGCGGCATTCC +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQPAHSL*RLQRHS
Trigger: GGAATGCCGCTGCAACCGCCACAGTGAATGCGCTGG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCTGGTCCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTGGCGTGGATGTGTACAGTATaGACGCCAGTGTCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: AWSCRKKSRPCESAEPLAWMCTV*TPVSGA
Trigger: GGCCCCTGACACTGGCGTCCATACTGTACACATCCA...CGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGGACCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGGCGCCGGGCCCACTTaGGTCTCCCACGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPGAGPT*VSHAQQ
Trigger: CTGCTGGGCGTGGGAGACCCAAGTGGGCCCGGCGCC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp ACGGCCCCGAAGGTCACGTCCAGCGTCAGGCGGATGTCCACGTTGGTGAATTTGAGTCGGCTGAGCCGTTaGCGCCGGGCCCACTTGGGT +
Preference number: 4 (lower is better)
Translates to: TAPKVTSSVRRMSTLVNLSRLSR*RRAHLG
Trigger: ACCCAAGTGGGCCCGGCGCCAACGGCTCAGCCGACT...CAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTCGGGGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGGCAGCCCAGCAGTGGTaGCGGGGATGGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLAAQQW*RGWLVG
Trigger: GCCCACCAGCCATCCCCGCCACCACTGCTGGGCTGC...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCGCAGCCCAGCAGTGGTaGCGGGGATGGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: MSEGHAGEVVLAQQSLPAAAQQW*RGWLVG
Trigger: GCCCACCAGCCATCCCCGCCACCACTGCTGGGCTGC...GGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
3UTR CAA 72 bp ACGTCCAGCGTCAGGCGGATGTCCACGTTGGTGAATTaGGGCTGCACGCCAAAGAGGACAGTGCGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: TSSVRRMSTLVN*GCTPKRTVRPG
Trigger: CCCCGGCCGCACTGTCCTCTTTGGCGTGCAGCCCAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR TCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTGGGTACGGCCACTGCTaGCAGGCTCTGGAAGCCGAG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSGYGHC*QALEAE
Trigger: CTCGGCTTCCAGAGCCTGTCAGCAGTGGCCGTACCC...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTACCCTCTACCCGGGGTaGGGCCCTGCAAATGCGACC +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPATLYPG*GPANAT
Trigger: GGTCGCATTTGCAGGGCCTCACCCCGGGTAGAGGGT...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAGCTGCCACAGTAGGCTaGGCACTCCTGCAGGCCACA +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASAATVG*ALLQAT
Trigger: TGTGGCCTGCAGGAGTGCTCAGCCTACTGTGGCAGC...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCCCTGCCCAGTGGACTaGAGGCCCACACGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAPCPVD*RPTRRW
Trigger: CCAACGACGTGTGGGCCTTCAGTCCACTGGGCAGGG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCCGCCGCTCACTCACTaGGTACCTGTACAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQPPLTH*VPVQVS
Trigger: GGAAACCTGTACAGGTACTCAGTGAGTGAGCGGCGG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCAGAGGCCGAGCGGGTaGGGTCGGGCAGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPQRPSG*GRAEAR
Trigger: CCTGGCTTCTGCCCGACCTCACCCGCTCGGCCTCTG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCCCAGCCTGTGGGCCTaGTCCCCGGACAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIPSLWA*SPDKQA
Trigger: GGCCTGCTTGTCCGGGGATCAGGCCCACAGGCTGGG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCATCACGGGGGCCGCTaGGTCCACCCTCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVHHGGR*VHPPCS
Trigger: GCTGCATGGAGGGTGGACTCAGCGGCCCCCGTGATG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGCCCGCCTCCGACAGCTaGACCCACAAACAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVPASDS*THKQRE
Trigger: CTCCCGCTGTTTGTGGGTTCAGCTGTCGGAGGCGGG...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCACTGTGGGCTCGAGAGTaGTGGGCCCAGCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPLWARE*WAQLAA
Trigger: GGCTGCGAGCTGGGCCCATCACTCTCGAGCCCACAG...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGCCTGTGCCGCAGTGTaGCGAGGGCTGACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPACAAV*RGLTPG
Trigger: GCCTGGGGTCAGCCCTCGTCACACTGCGGCACAGGC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCGCAGCACCTGCCGCTaGCCCTTGCAGTCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHRSTCR*PLQSPA
Trigger: GGCGGGGGACTGCAAGGGGCAGCGGCAGGTGCTGCG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGCCTCCCGCAGCACCTaGCGCTGCCCCTTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIASRST*RCPLQS
Trigger: GGACTGCAAGGGGCAGCGGCAGGTGCTGCGGGAGGC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGCCTCCCGCAGCACCTaGCGCTGCCCCTTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPASRST*RCPLQS
Trigger: GGACTGCAAGGGGCAGCGGCAGGTGCTGCGGGAGGC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACTGGCCTCCGAAAACTaGCAGCAGCCCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASLASEN*QQPWWG
Trigger: TCCCCACCAGGGCTGCTGGCAGTTTTCGGAGGCCAG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAAGGGGGCCGTCCGCCTaGCGGAATCACCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPRGPSA*RNHLLP
Trigger: TGGGAGCAGGTGATTCCGGCAGGCGGACGGCCCCCT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGACCACTGGGAGGCGCTaGTCGGCCCTCAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVTTGRR*SALRGS
Trigger: GGAACCCCTGAGGGCCGAGCAGCGCCTCCCAGTGGT...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCGCACCAGCCCAGGGTaGCAGGTCCCCGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHRTSPG*QVPVEG
Trigger: CCCCTCCACGGGGACCTGGCACCCTGGGCTGGTGCG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCACCAGCCCAGGGTaGCAGGTCCCCGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPRTSPG*QVPVEG
Trigger: CCCCTCCACGGGGACCTGGCACCCTGGGCTGGTGCG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAGCAGACCCAGGGCGCTaGAGCCGCCGCGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGADPGR*SRRVSF
Trigger: GAAGGAGACGCGGCGGCTGCAGCGCCCTGGGTCTGC...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCCTTTGCGGCTGGTaGTCTGATGCCACTCACAGA +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEPLCGW*SDATHR
Trigger: TCTGTGAGTGGCATCAGAGCACCAGCCGCAAAGGGG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTGCCCCGCCGGCTGCATaGCGCGTCCCCTTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPAPPAA*RVPFAA
Trigger: AGCCGCAAAGGGGACGCGGCATGCAGCCGGCGGGGC...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAAGCCAGGGCCCCGCTTaGGGCAGTGGCTGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPSQGPA*GSGCGS
Trigger: GCTTCCACAGCCACTGCCGCAAGCGGGGCCCTGGCT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGTGGCGTTGCCGAAGCTaGCGGGCCGGCATCGTTCGC +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVWRCRS*RAGIVR
Trigger: GCGAACGATGCCGGCCCGGCAGCTTCGGCAACGCCA...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTGCCAGGCCCGGCTCTTaGAGCCCCGCCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPARPGS*SPATWR
Trigger: CCTCCAGGTGGCGGGGCTGCAAGAGCCGGGCCTGGC...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGTCAGCGTGCAGGGGGTaGTGCTGTCGGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVSACRG*CCRGRR
Trigger: CCTTCTCCCCCGACAGCAGCACCCCCTGCACGCTGA...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAGGGCACATATGCGGCTaGATGGAAGGAGCGGGGCGA +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASGHICG*MEGAGR
Trigger: TCGCCCCGCTCCTTCCATGCAGCCGCATATGTGCCC...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCTTCTCCTGCCGCCATTaGAGGGTGGTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGFSCRH*RVVRLR
Trigger: CCTCAACCTCACCACCCTGCAATGGCGGCAGGAGAA...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGTTCTCCTGCCGCCATTaGAGGGTGGTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEFSCRH*RVVRLR
Trigger: CCTCAACCTCACCACCCTGCAATGGCGGCAGGAGAA...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACCAGCAGACTCCAGGTaGGGTCAGGACAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASPADSR*GQDSAG
Trigger: CCCTGCACTGTCCTGACCGCACCTGGAGTCTGCTGG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGCGGCTCCCGACTGCTaGCACAGCATGGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAAAPDC*HSMGHR
Trigger: TCTGTGGCCCATGCTGTGGCAGCAGTCGGGAGCCGC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGCAGGCGGCTCCCGACTaGTGCCACAGCATGGGCCAC +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLQAAPD*CHSMGH
Trigger: GTGGCCCATGCTGTGGCAGCAGTCGGGAGCCGCCTG...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCTGCTCCAAACACAGTaGTGCCAGCCCCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQLLQTQ*CQPPSA
Trigger: AGCAGATGGGGGCTGGCAGCACTGTGTTTGGAGCAG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGGGGCTCAGACACTGCTaGAGGCTGCTGCTCCAAACA +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEGLRHC*RLLLQT
Trigger: TGTTTGGAGCAGCAGCCTGCAGCAGTGTCTGAGCCC...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGTCGTTGCAGTCGTGGTaGCCGTTTGCACACTCGTCC +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGESLQSW*PFAHSS
Trigger: GGACGAGTGTGCAAACGGGCACCACGACTGCAACGA...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGATTCACTGTGGCGGTTaGAGCGGCATTCCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEIHCGG*SGIPWS
Trigger: GCTCCACGGAATGCCGCTGCAACCGCCACAGTGAAT...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACCGGGGCCCACCATCTaGAGGGGGTGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGPGPTI*RGWWRW
Trigger: CCACCTCCACCACCCCCTGCAGATGGTGGGCCCCGG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCATCTTGGTCATCTCCTaGAAGTGCCGGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGILVIS*KCRRCS
Trigger: GGAGCAGCGCCGGCACTTGCAGGAGATGACCAAGAT...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACCCCCACAGTACTCGTaGAGCCTGTGCCGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASPPQYS*SLCRSV
Trigger: CACACTGCGGCACAGGCTGCACGAGTACTGTGGGGG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp GGCCACGCCAGCCATGCCATCTTCTGTGGGCTCGAGAGTGATGGGCCCAGCTCGCTGGAGGCCTCACAGTaGTTCTCCCTCTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: GHASHAIFCGLESDGPSSLEASQ*FSLSEA
Trigger: GGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAG...CGAGCTGGGCCCATCACTCTCGAGCCCACAGAAGATGGCATGGCTGGCGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCGGTGCTGGGGGCTTaGGGCCTCGATGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSPVLGA*GLDEPL
Trigger: GAGTGGCTCATCGAGGCCCCAAGCCCCCAGCACCGG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACACTGCCCGTGGCTCTaGCAGCCACCCGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGHCPWL*QPPGHR
Trigger: CCTGTGCCCGGGTGGCTGCCAGAGCCACGGGCAGTG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAGGCTGGCACTGCCCGTaGCTCTGGCAGCCACCCGGG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILGWHCP*LWQPPG
Trigger: CCCGGGTGGCTGCCAGAGCCACGGGCAGTGCCAGCC...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGAGGCTCACAGCGGCATaGTCCCAGGGGCGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVRLTAA*SQGRGA
Trigger: TGCGCCTCGCCCCTGGGACCATGCCGCTGTGAGCCT...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGAGAACCGGGCAGTaGAGGGCCGGTGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASQRTGQ*RAGVHH
Trigger: ATGGTGGACACCGGCCCTCCACTGCCCGGTTCTCTG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGAAGGCTCGCTCCCTTaGGCCCTGAAGCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVEGSLP*ALKPIP
Trigger: CGGGATGGGCTTCAGGGCCCAAGGGAGCGAGCCTTC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGCCCTCAGGGGTTCCTaGCGGGGCAAGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVALRGS*RGKLSS
Trigger: GGAGCTGAGCTTGCCCCGCCAGGAACCCCTGAGGGC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGTGAGTACCGACCACTaGGAGGCGCTGCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAVSTDH*EALLGP
Trigger: AGGGCCGAGCAGCGCCTCCCAGTGGTCGGTACTCAC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCCAGGCCCAGGCAGCTaGCGGCTGGACAAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPPGPGS*RLDKPP
Trigger: TGGGGGCTTGTCCAGCCGCCAGCTGCCTGGGCCTGG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCCAGGCAGGAAGCTCTaGGTGACGCAGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAPGRKL*VTQASR
Trigger: CCTGGAGGCCTGCGTCACCCAGAGCTTCCTGCCTGG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGTCTACTGCATACTTGTaGTCCCGCCCAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGESTAYL*SRPGRG
Trigger: CCCTCTGCCTGGGCGGGACCACAAGTATGCAGTAGA...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGGCGCAGGTGGCAGGTaGCACTGGTCAGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSGAGGR*HWSGTS
Trigger: GCTGGTGCCTGACCAGTGCCACCTGCCACCTGCGCC...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCGGGGGACACTCCTCTaGACTCTTCAGGGCACCCCG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPARGTLL*TLQGTP
Trigger: CGGGGTGCCCTGAAGAGTCCAGAGGAGTGTCCCCCG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGTCGACAGCCCCCGTGTaGGTACCGGGCCAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVSTAPV*VPGQVG
Trigger: GCCTACTTGGCCCGGTACCCACACGGGGGCTGTCGA...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCACCAGCCACACTCGTaGCTCTGCAGACACTCATGG +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEHQPHS*LCRHSW
Trigger: CCATGAGTGTCTGCAGAGCCACGAGTGTGGCTGGTG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCCGTGCCCGTTGCACTaGCAGGGCCGGCAGCCCCTA +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPPCPLH*QGRQPL
Trigger: TAGGGGCTGCCGGCCCTGCCAGTGCAACGGGCACGG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGGCCTGTCCCGTCGCTaGCCGCAGAAGGCAGCTATG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAGLSRR*PQKAAM
Trigger: CATAGCTGCCTTCTGCGGCCAGCGACGGGACAGGCC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTGGCCTGTCCCGTCGCTaGCCGCAGAAGGCAGCTATG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSGLSRR*PQKAAM
Trigger: CATAGCTGCCTTCTGCGGCCAGCGACGGGACAGGCC...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGTGGGGCACGCATTCCTaGGGGACGGGACAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSWGTHS*GTGQLP
Trigger: CGGGAGCTGTCCCGTCCCCCAGGAATGCGTGCCCCA...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTGAAGGAGCGGGGCGATaGGCCTGGGCCCCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPEGAGR*AWAPVL
Trigger: GAGGACGGGGGCCCAGGCCCATCGCCCCGCTCCTTC...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGGCAGCTCCACGGTCTaGGGGGCCTTCTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIGSSTV*GAFSCR
Trigger: GCGGCAGGAGAAGGCCCCCCAGACCGTGGAGCTGCC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTGTGACCAGCAACGGCTaGCAGCTCCACGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSVTSNG*QLHGLG
Trigger: CCCCAGACCGTGGAGCTGCCAGCCGTTGCTGGTCAC...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGGGGGTGTCCCACTCTaGGCTCCTGACACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAGGVPL*APDTQV
Trigger: CACCTGGGTGTCAGGAGCCCAGAGTGGGACACCCCC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTGACAAGCAGGCCCCATaGCACCAGGTGCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSDKQAP*HQVQAP
Trigger: TGGGGCCTGCACCTGGTGCCATGGGGCCTGCTTGTC...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTTGCAGGGTCCGAGGATaGCGGGCCAGGCACTCACTG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPACRVRG*RARHSL
Trigger: CAGTGAGTGCCTGGCCCGCCATCCTCGGACCCTGCA...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCACCTTCGGGGCAGTTaGTACACCACTTACAGCGGG +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQHLRGS*YTTYSG
Trigger: CCCGCTGTAAGTGGTGTACCAACTGCCCCGAAGGTG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGGGCAGGAGGTACAGTTaGGTAGGAGGTGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEGRRYS*VGGDKG
Trigger: CCCCTTGTCACCTCCTACCCAACTGTACCTCCTGCC...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCCACGACAAAAGGCGTaGCAGGGCCGGCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVPRQKA*QGRQVP
Trigger: CGGGACCTGCCGGCCCTGCCACGCCTTTTGTCGTGG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AAGCAGACGGTGACCTTGGCGAAGGGGCGGCTGGCCATCTTGGTCATCTCCTGCTGGAGGTGGTGGGGCTaGGGGTGGCTGGATGTGTAC +
Preference number: 4 (lower is better)
Translates to: KQTVTLAKGRLAILVISCWRWWG*GWLDVY
Trigger: GTACACATCCAGCCACCCCCAGCCCCACCACCTCCA...GCAGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCAAGGTCACCGTCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCTACCTCCCGTACCCGTaGCTCTGCTGGGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIYLPYP*LCWGAR
Trigger: CCGGGCGCCCCAGCAGAGCCACGGGTACGGGAGGTA...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGGCGCCGGGCCCACTTaGGTCTCCCACGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHGAGPT*VSHAQQ
Trigger: CTGCTGGGCGTGGGAGACCCAAGTGGGCCCGGCGCC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCAGTGGTGGCGGGGATaGCTGGTGGGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPQWWRG*LVGSSP
Trigger: GGGGCTGCTGCCCACCAGCCATCCCCGCCACCACTG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCGCCGTTGGGTGCATaGGGCCCGCCAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHAPLGA*GPPGSW
Trigger: CCAGCTGCCTGGCGGGCCCCATGCACCCAACGGCGC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTGCGCCGTTGGGTGCATaGGGCCCGCCAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPAPLGA*GPPGSW
Trigger: CCAGCTGCCTGGCGGGCCCCATGCACCCAACGGCGC...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGGTGACCCAGCTGCTGTaGATGAGAACCCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQVTQLL*MRTLGM
Trigger: CATGCCCAGGGTTCTCATCCACAGCAGCTGGGTCAC...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTCCATCTGGGCAACCCTaGGGGAAGGGGGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSPSGQP*GKGASG
Trigger: ACCACTGGCCCCCTTCCCCCAGGGTTGCCCAGATGG...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCCATCTGGGCAACCCTaGGGGAAGGGGGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAPSGQP*GKGASG
Trigger: ACCACTGGCCCCCTTCCCCCAGGGTTGCCCAGATGG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AAGCAGACGGTGACCTTGGCGAAGGGGCGGCTGGCCATCTTGGTCATCTCCTGCAAAGGAGGCCCCATCTaGGCAACCCTGGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: KQTVTLAKGRLAILVISCKGGPI*ATLGEG
Trigger: CCCTTCCCCCAGGGTTGCCCAGATGGGGCCTCCTTT...GCAGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCAAGGTCACCGTCTGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGGGCCCACAAGGCCCTaGGTGATCCAGCCCCTGACT +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAGPTRP*VIQPLT
Trigger: AGTCAGGGGCTGGATCACCCAGGGCCTTGTGGGCCC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTAGGAGTCCAAGGAGGTaGCTCAGGTGCGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSRSPRR*LRCGVA
Trigger: CGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCT...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAACCCTCTACCCGGGGTaGGGCCCTGCAAATGCGACC +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPTLYPG*GPANAT
Trigger: GGTCGCATTTGCAGGGCCTCACCCCGGGTAGAGGGT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGGCTTGGGGCCTCGATaGGCCACTCGCAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAGLGPR*ATRSCH
Trigger: ATGGCAACTGCGAGTGGCTCATCGAGGCCCCAAGCC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGCTGCCACAGTAGGCTaGGCACTCCTGCAGGCCACA +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAAATVG*ALLQAT
Trigger: TGTGGCCTGCAGGAGTGCTCAGCCTACTGTGGCAGC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAAGGCCTCCAGGGACGTaGCGAAGACAGGCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGRPPGT*RRQAQA
Trigger: GGCCTGCGCCTGTCTTCGTCACGTCCCTGGAGGCCT...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCAGGCCTCCAGGGACGTaGCGAAGACAGGCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIRPPGT*RRQAQA
Trigger: GGCCTGCGCCTGTCTTCGTCACGTCCCTGGAGGCCT...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACTGAGGACACGTTGGTaGGGAGGGCGCGACCCCCAC +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGLRTRW*GGRDPH
Trigger: GTGGGGGTCGCGCCCTCCTCACCAACGTGTCCTCAG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGCTGGCAGTGTCGGCTaGGAGGCGGCTGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSAGSVG*EAAVHE
Trigger: CTCATGGACAGCCGCCTCTCAGCCGACACTGCCAGC...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGCTGGCAGTGTCGGCTaGGAGGCGGCTGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPAGSVG*EAAVHE
Trigger: CTCATGGACAGCCGCCTCTCAGCCGACACTGCCAGC...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGCGGGCAGTAAGGGTGTaGCCAGCAACGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLRAVRV*PATAGS
Trigger: GCTGCCAGCCGTTGCTGGTCACACCCTTACTGCCCG...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACGGGGCTCCTTCAGGTaGGGTGAGATTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASRGSFR*GEISSR
Trigger: CCTGGAGGAAATCTCACCTCACCTGAAGGAGCCCCG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCCCAGCCTGTGGGCCTaGTCCCCGGACAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPPSLWA*SPDKQA
Trigger: GGCCTGCTTGTCCGGGGATCAGGCCCACAGGCTGGG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCCCAGCCTGTGGGCCTaGTCCCCGGACAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHPSLWA*SPDKQA
Trigger: GGCCTGCTTGTCCGGGGATCAGGCCCACAGGCTGGG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGTCAGCAGAGAGTGGCTaGAGCACGTCCAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGESAESG*STSSHR
Trigger: CCTATGACTGGACGTGCTTCAGCCACTCTCTGCTGA...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGCCCGCCTCCGACAGCTaGACCCACAAACAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLPASDS*THKQRE
Trigger: CTCCCGCTGTTTGTGGGTTCAGCTGTCGGAGGCGGG...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCTGCTCCACCGAGATaGGGCGGTAGCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSPAPPR*GGSTAG
Trigger: GCCAGCAGTGCTACCGCCTCATCTCGGTGGAGCAGG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGGGATGTCCACGTTGGTaGATTTGGGCTGCACGCCAA +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQGCPRW*IWAARQ
Trigger: TTGGCGTGCAGCCCAAATTCACCAACGTGGACATCC...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAAGAAGCGGCTCGACTTaGGGGCATGGTGCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASRSGST*GHGARV
Trigger: CACACGAGCACCATGCCCTCAAGTCGAGCCGCTTCT...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAGCCTGTGCCGCAGTGTaGCGAGGGCTGACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILACAAV*RGLTPG
Trigger: GCCTGGGGTCAGCCCTCGTCACACTGCGGCACAGGC...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTTCCAGCTTTGCTGTGTaGCCCTGGTCCCCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSSSFAV*PWSPVR
Trigger: CCTCACCGGGGACCAGGGTCACACAGCAAAGCTGGA...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGAGCCTCCATAGAGGCTaGGGGCCGGGACAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVSLHRG*GPGQAR
Trigger: CCTAGCCTGTCCCGGCCCGCAGCCTCTATGGAGGCT...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCCATGGCCAGAACCTTaGCCAGGGCCATCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVPWPEP*PGPSPP
Trigger: AGGCGGCGATGGCCCTGGGCAAGGTTCTGGCCATGG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGCCATGGCCAGAACCTTaGCCAGGGCCATCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLPWPEP*PGPSPP
Trigger: AGGCGGCGATGGCCCTGGGCAAGGTTCTGGCCATGG...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCAAGGCCAAAACCAGTaGCATGGCCAGAACCTTGCC +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGQGQNQ*HGQNLA
Trigger: GGCAAGGTTCTGGCCATGGCACTGGTTTTGGCCTTG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACGCAGCACCTGCCGCTaGCCCTTGCAGTCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQRSTCR*PLQSPA
Trigger: GGCGGGGGACTGCAAGGGGCAGCGGCAGGTGCTGCG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCATGGGCGGAGGTCGGGTaGTCCCACTTAGACTGGCAA +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASWAEVG*SHLDWQ
Trigger: TTGCCAGTCTAAGTGGGAGCACCCGACCTCCGCCCA...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACCACCAACAGGACGCTaGCACCAAGCACCGCAGCTA +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASPPTGR*HQAPQL
Trigger: TAGCTGCGGTGCTTGGTGGCAGCGTCCTGTTGGTGG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCCCACCAGCCCACAGTaGCTGAGATCTGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAPTSPQ*LRSAPL
Trigger: GAGGGGAGCAGATCTCAGGCACTGTGGGCTGGTGGG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCAGACCCAGGGCGCTaGAGCCGCCGCGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHADPGR*SRRVSF
Trigger: GAAGGAGACGCGGCGGCTGCAGCGCCCTGGGTCTGC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGGAAGAATAGGAGGTaGAGGACGACGAGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGRKNRR*RTTSGR
Trigger: CCTACCGCTCGTCGTCCTGCACCTCCTATTCTTCCT...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGGCCACAGCCCTGGTCTaGCAAGCAGCCCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLATALV*QAAQAG
Trigger: TCCTGCCTGGGCTGCTTGGCAGACCAGGGCTGTGGC...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGCGTGGCAGTCCCGATaGTCCTCGCAGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPAWQSR*SSQSGQ
Trigger: CTGCCCACTCTGCGAGGAGCATCGGGACTGCCACGC...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTATGCCGCGTCCCCTTTaGGGCTGGTGCTCTGATGCC +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAMPRPL*GWCSDA
Trigger: GGCATCAGAGCACCAGCCGCAAAGGGGACGCGGCAT...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTATGCCGCGTCCCCTTTaGGGCTGGTGCTCTGATGCC +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSMPRPL*GWCSDA
Trigger: GGCATCAGAGCACCAGCCGCAAAGGGGACGCGGCAT...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGAGGTCAGTCGCTGGCTaGAGAGCGGGGGACACTCCT +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVRSVAG*RAGDTP
Trigger: AGGAGTGTCCCCCGCTCTGCAGCCAGCGACTGACCT...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCGGCGTGGGTCCCCGTaGCCGTTGCACTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSRRGSP*PLHWQG
Trigger: GCCCTGCCAGTGCAACGGGCACGGGGACCCACGCCG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCACCCAGGTGCCGGTTaGCAGCTGGTACTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAHPGAG*QLVLQQ
Trigger: CTGCTGGAGTACCAGCTGGCAACCGGCACCTGGGTG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCAGGCGGCTCCCGACTaGTGCCACAGCATGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPQAAPD*CHSMGH
Trigger: GTGGCCCATGCTGTGGCAGCAGTCGGGAGCCGCCTG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTAGGGGGCAGGGTCAGTaGCAGCAGGCGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSRGQGQ*QQAAQG
Trigger: GCCCTGGGCCGCCTGCTGGCACTGACCCTGCCCCCT...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACTCGGAGCAGTTCCCTaGCCAGAAGACCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASLGAVP*PEDLSL
Trigger: CAGCGAGAGGTCTTCTGGGCAGGGAACTGCTCCGAG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAACTGCCGCGTCCACATaGACTTGCCCTCCCGCGTGC +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPTAAST*TCPPAC
Trigger: GCACGCGGGAGGGCAAGTGCATGTGGACGCGGCAGT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGACTGCCGCGTCCACATaGACTTGCCCTCCCGCGTGC +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLTAAST*TCPPAC
Trigger: GCACGCGGGAGGGCAAGTGCATGTGGACGCGGCAGT...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCGACACTGCTGCAGGCTaGTGCTCCAAACACAGTGCT +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGDTAAG*CSKHSA
Trigger: AGCACTGTGTTTGGAGCAGCAGCCTGCAGCAGTGTC...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAAGGCGCACTGAGTTaGCTGAGCACAGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASQGALS*LSTAQG
Trigger: TCCCTGGGCTGTGCTCAGGCAACTCAGTGCGCCTTG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGTCGTGGTGCCCGTTTaGACACTCGTCCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAVVVPV*TLVLRG
Trigger: CCCCCTGAGGACGAGTGTGCAAACGGGCACCACGAC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAAAGAGGACAGTaGGGCCGGGGCCTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPRQRGQ*GRGLAP
Trigger: GGGCGCTAGGCCCCGGCCGCACTGTCCTCTTTGGCG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCTGGTCCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTGGCGTTGGTGAATTTGGGCTaGACGCCAAAGAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: AWSCRKKSRPCESAEPLALVNLG*TPKRTV
Trigger: CACTGTCCTCTTTGGCGTGCAGCCCAAATTCACCAA...CGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGGACCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR GCA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTGCGGACCACCAGCACTaGCGACGGCTCCGTCACCGT +
Preference number: 4 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLADHQH*RRLRHR
Trigger: ACGGTGACGGAGCCGTCGGCAGTGCTGGTGGTCCGC...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTTGTCAGCAGCAGGGGTaGCAGGAAGGGCTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPACQQQG*QEGLRA
Trigger: CGCTCTGAGCCCTTCCTGGCACCCCTGCTGCTGACA...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCATACTCGTGCAGCCTGTaGCGCAGTGTGACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASYSCSL*RSVTRA
Trigger: AGCCCTCGTCACACTGCGGCACAGGCTGCACGAGTA...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACCACCCCAGGGCCTCTaGCTTTGCTTCCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASPPQGL*LCFPKL
Trigger: GAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCCAATAAAACAAGCCTaGTCCCACCCCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQPIKQA*SHPRAS
Trigger: AGAGGCCCTGGGGTGGGAGCAGGCTTGTTTTATTGG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCTGTCTCTTTCCAGCTaGTTCCCTCGCCAGCGCTAT +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQLSLSS*FPRQRY
Trigger: ATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCCTCAGTGGCCCCCATaGCCACCTGGGGTGGGATCT +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVPQWPP*PPGVGS
Trigger: AGATCCCACCCCAGGTGGGCATGGGGGCCACTGAGG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCACCTCAGTGGCCCCCATaGCCACCTGGGGTGGGATCT +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPPQWPP*PPGVGS
Trigger: AGATCCCACCCCAGGTGGGCATGGGGGCCACTGAGG...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCACGCGAAGGGAAGATaGAAAGTCCAGTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQHAKGR*KVQSLQ
Trigger: CTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGTCAGGGGTTCGGGCCTaGACCCCACAGACCCAATCC +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVSGVRA*TPQTQS
Trigger: GGATTGGGTCTGTGGGGTCCAGGCCCGAACCCCTGA...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCCGGTGCTGGGGGCTTaGGGCCTCGATGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPPVLGA*GLDEPL
Trigger: GAGTGGCTCATCGAGGCCCCAAGCCCCCAGCACCGG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACACTGCCCGTGGCTCTaGCAGCCACCCGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILHCPWL*QPPGHR
Trigger: CCTGTGCCCGGGTGGCTGCCAGAGCCACGGGCAGTG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGGCTGGCACTGCCCGTaGCTCTGGCAGCCACCCGGG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHGWHCP*LWQPPG
Trigger: CCCGGGTGGCTGCCAGAGCCACGGGCAGTGCCAGCC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGGCACACACACCCGGTaGCTGGCACTGCCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIGTHTR*LALPVA
Trigger: AGCCACGGGCAGTGCCAGCCACCGGGTGTGTGTGCC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGGCATTGTTGAGGTCCTaGCCTCCGAAAACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQALLRS*PPKTAS
Trigger: GCTGGCAGTTTTCGGAGGCCAGGACCTCAACAATGC...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGAAGGCTCGCTCCCTTaGGCCCTGAAGCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVEGSLP*ALKPIP
Trigger: CGGGATGGGCTTCAGGGCCCAAGGGAGCGAGCCTTC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCAAGGCCAGGCAGGCCTaGCAGTCACCCAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIKARQA*QSPRRR
Trigger: CCGCCTCCTGGGTGACTGCCAGGCCTGCCTGGCCTT...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCCCTCCAGGCAGCATTaGGTAGATGAAGCCACGGTA +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGPSRQH*VDEATV
Trigger: TACCGTGGCTTCATCTACCCAATGCTGCCTGGAGGG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGGCGCAGGTGGCAGGTaGCACTGGTCAGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPGAGGR*HWSGTS
Trigger: GCTGGTGCCTGACCAGTGCCACCTGCCACCTGCGCC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACAATGGGCTCCGCCCTaGCGCAGGTGGCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGQWAPP*RRWQVA
Trigger: TGCCACCTGCCACCTGCGCCAGGGCGGAGCCCATTG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCAATGGGCTCCGCCCTaGCGCAGGTGGCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPQWAPP*RRWQVA
Trigger: TGCCACCTGCCACCTGCGCCAGGGCGGAGCCCATTG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACCGTCATCCCCGCAATaGGCTCCGCCCTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILPSSPQ*APPWRR
Trigger: CCTGCGCCAGGGCGGAGCCCATTGCGGGGATGACGG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGCGGGGGACACTCCTCTaGACTCTTCAGGGCACCCCG +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLRGTLL*TLQGTP
Trigger: CGGGGTGCCCTGAAGAGTCCAGAGGAGTGTCCCCCG...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCAGGTGTGGGTGGACTaGCACCAGGCGCACTGGCTA +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAQVWVD*HQAHWL
Trigger: TAGCCAGTGCGCCTGGTGCCAGTCCACCCACACCTG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGTCGACAGCCCCCGTGTaGGTACCGGGCCAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLSTAPV*VPGQVG
Trigger: GCCTACTTGGCCCGGTACCCACACGGGGGCTGTCGA...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAGGCACCGTCCCAGTGTaGGGTTGTCCTCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASGTVPV*GCPHCH
Trigger: GTGGCAATGAGGACAACCCCACACTGGGACGGTGCC...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTGACCCGGGGCGGGTGTaGGAGGGGGCAGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPDPGRV*EGAGLM
Trigger: CATCAGACCTGCCCCCTCCCACACCCGCCCCGGGTC...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACCGTGCCCGTTGCACTaGCAGGGCCGGCAGCCCCTA +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILPCPLH*QGRQPL
Trigger: TAGGGGCTGCCGGCCCTGCCAGTGCAACGGGCACGG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAGCAGTGGCCACGGCGTaGGTCCCCGTGCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILAVATA*VPVPVA
Trigger: TGCAACGGGCACGGGGACCCACGCCGTGGCCACTGC...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCTGAGGTTGTCGCAGTaGCCACGGCGTGGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFILRLSQ*PRRGSP
Trigger: CGGGGACCCACGCCGTGGCCACTGCGACAACCTCAG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGGAGCAGAGCTGGCAGTaGGCACCCTCGGTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLEQSWQ*APSVWS
Trigger: GGACCACACCGAGGGTGCCCACTGCCAGCTCTGCTC...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGATCCCCATAATAGCCTaGGGAGCAGAGCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQIPIIA*GAELAV
Trigger: CACTGCCAGCTCTGCTCCCCAGGCTATTATGGGGAT...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCTGGGGCACGCATTCCTaGGGGACGGGACAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIWGTHS*GTGQLP
Trigger: CGGGAGCTGTCCCGTCCCCCAGGAATGCGTGCCCCA...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCCCTGCAGCACCGTCCTaGGGCACGCATTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIPAAPS*GTHSWG
Trigger: CCCCCAGGAATGCGTGCCCCAGGACGGTGCTGCAGG...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCGCCATCCAGCTTGGTaGCGCAGTCGGGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHRHPAW*RSRGPR
Trigger: TCGGGGGCCCCGACTGCGCCACCAAGCTGGATGGCG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTGCCCGCCATCCAGCTTaGTGGCGCAGTCGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSARHPA*WRSRGP
Trigger: GGGGCCCCGACTGCGCCACCAAGCTGGATGGCGGGC...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCGGGTCCATCCACCATaGTGTGGCCCAGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVRVHPP*CGPGGA
Trigger: TGCACCGCCTGGGCCACACCATGGTGGATGGACCCG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTGGCAGCTCCACGGTCTaGGGGGCCTTCTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPGSSTV*GAFSCR
Trigger: GCGGCAGGAGAAGGCCCCCCAGACCGTGGAGCTGCC...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGGGGGTGTCCCACTCTaGGCTCCTGACACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVGGVPL*APDTQV
Trigger: CACCTGGGTGTCAGGAGCCCAGAGTGGGACACCCCC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACGTAGAGGGAGTCGGTaGCCTCGTGGTAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASRRGSR*PRGRQQ
Trigger: CTGCTGTCTACCACGAGGCCACCGACTCCCTCTACG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCACTGCTGCCACAGCATaGGCCACAGACTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGTAATA*ATDSSI
Trigger: AATGGAGGAGTCTGTGGCCCATGCTGTGGCAGCAGT...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAGCACACCAGCCGCAATaGGGGCGCCGCAGGCACAAG +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGAHQPQ*GRRRHK
Trigger: CTTGTGCCTGCGGCGCCCCCATTGCGGCTGGTGTGC...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCCGTTCACGCAGCCCTaGGCGCACACAGGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHPFTQP*AHTGRH
Trigger: GTGCCGCCCTGTGTGCGCCCAGGGCTGCGTGAACGG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAAAGTGGCAGCGGCAGTaGTCGGGCTCCACACATGAG +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASKWQRQ*SGSTHE
Trigger: CTCATGTGTGGAGCCCGACCACTGCCGCTGCCACTT...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCCACGACAAAAGGCGTaGCAGGGCCGGCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIPRQKA*QGRQVP
Trigger: CGGGACCTGCCGGCCCTGCCACGCCTTTTGTCGTGG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAAGTTGGTCTGGGACGTaGGGTCCAGGCAGCACTCCT +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASSWSGT*GPGSTP
Trigger: AGGAGTGCTGCCTGGACCCCACGTCCCAGACCAACT...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGGCGCCGGGCCCACTTaGGTCTCCCACGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHGAGPT*VSHAQQ
Trigger: CTGCTGGGCGTGGGAGACCCAAGTGGGCCCGGCGCC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCAGTCGGCTGAGCCGTTaGCGCCGGGCCCACTTGGGT +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFISRLSR*RRAHLG
Trigger: ACCCAAGTGGGCCCGGCGCCAACGGCTCAGCCGACT...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCATGGCGAAGGGGCGGCTaGCCATCTTGGTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASWRRGG*PSWSSP
Trigger: AGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCA...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAGGCGGGGATGGCTGGTaGGCAGCAGCCCCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILGGDGW*AAAPSH
Trigger: ATGGGAGGGGGCTGCTGCCCACCAGCCATCCCCGCC...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGGGGCCCACAAGGCCCTaGGTGATCCAGCCCCTGACT +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLGPTRP*VIQPLT
Trigger: AGTCAGGGGCTGGATCACCCAGGGCCTTGTGGGCCC...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGGCTCAGGTGCGGGGTaGCGCCTCAGGAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHGSGAG*RLRRAQ
Trigger: CTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGATGATTCCCGGCACTTaGCGCATTGGTGCACTTCCC +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEMIPGT*RIGALP
Trigger: GGGAAGTGCACCAATGCGCCAAGTGCCGGGAATCAT...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378073.5
3UTR CAA 72 bp GAACCCTGGGCATGTCAGAGGGACATGCTGGTGAGGTaGTCCTGGCTCAACAGTCCCTTCCGGCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: EPWACQRDMLVR*SWLNSPFRPAP
Trigger: TGGTGCGGGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAGGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR TCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCGGGTACGGCCACTGCTaGCAGGCTCTGGAAGCCGAG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIGYGHC*QALEAE
Trigger: CTCGGCTTCCAGAGCCTGTCAGCAGTGGCCGTACCC...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAACTCGCAGTTGCCATTaGCGCTGTAGTTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASTRSCH*RCSCPH
Trigger: GTGCGGGCAACTACAGCGTCAATGGCAACTGCGAGT...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACACGGCCACATGGGAGTaGCGGGCAGCCGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHTATWE*RAAGAG
Trigger: TCCTGCCCCGGCTGCCCGTCACTCCCATGTGGCCGT...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCCCTGCCCAGTGGACTaGAGGCCCACACGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPPCPVD*RPTRRW
Trigger: CCAACGACGTGTGGGCCTTCAGTCCACTGGGCAGGG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTAGGCCTCCAGGGACGTaGCGAAGACAGGCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPRPPGT*RRQAQA
Trigger: GGCCTGCGCCTGTCTTCGTCACGTCCCTGGAGGCCT...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTAGAAGCAGAGCCCACTaGGGTTGTCGCAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSRSRAH*GCRSGH
Trigger: GTGGCCACTGCGACAACCTCAGTGGGCTCTGCTTCT...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGCAGAACGTCGCTGCTaGACTCGTCAGGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSAERRC*TRQGPS
Trigger: GCTCGGACCCTGACGAGTTCAGCAGCGACGTTCTGC...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGAGACCTCTCGCTGGTTaGTCCGACAGTCATTCTCAG +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGERPLAG*SDSHSQ
Trigger: CTGAGAATGACTGTCGGATCAACCAGCGAGAGGTCT...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGTCTCCCCTGTCCTCTTaGACTGCCGCGTCCACATGC +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVSPLSS*TAASTC
Trigger: GCATGTGGACGCGGCAGTTCAAGAGGACAGGGGAGA...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGTCGGGCTCCACACATaGGCCGTTCACGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIVGLHT*AVHAAL
Trigger: CAGGGCTGCGTGAACGGCTCATGTGTGGAGCCCGAC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACCCGCCTCCGACAGCTaGACCCACAAACAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGPASDS*THKQRE
Trigger: CTCCCGCTGTTTGTGGGTTCAGCTGTCGGAGGCGGG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGGTCTCTGTGTTATTCTaGCATGGACAGCCCGTCCCA +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEVSVLF*HGQPVP
Trigger: TGGGACGGGCTGTCCATGTCAGAATAACACAGAGAC...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR TCA 90 bp ACGGCCCCGAAGGTCACGTCCAGCGTCAGGCGGATGTCCACGTTGGTGAATTTGCGGACTCCCGTGAAATaGTTCCCGGCACTTGGCGCA +
Preference number: 4 (lower is better)
Translates to: TAPKVTSSVRRMSTLVNLRTPVK*FPALGA
Trigger: TGCGCCAAGTGCCGGGAATCATTTCACGGGAGTCCG...CAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTCGGGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR TCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCCTGCTCCACCGAGATaGGGCGGTAGCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIPAPPR*GGSTAG
Trigger: GCCAGCAGTGCTACCGCCTCATCTCGGTGGAGCAGG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGTGGGAAGCAGACGGTaGCCTTGGCGAAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHVGSRR*PWRRGG
Trigger: GCCGCCCCTTCGCCAAGGTCACCGTCTGCTTCCCAC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGTACACATCCCACATCTaGGCCAGACTCCCTCATTGC +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQYTSHI*ARLPHC
Trigger: GCAATGAGGGAGTCTGGCTCAGATGTGGGATGTGTA...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCAGCCTCCATAGAGGCTaGGGGCCGGGACAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSISLHRG*GPGQAR
Trigger: CCTAGCCTGTCCCGGCCCGCAGCCTCTATGGAGGCT...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCGCAGGTGCCGTGGCTaGCACAGTAGGCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSRRCRG*HSRLST
Trigger: AGTGCTCAGCCTACTGTGGCAGCCACGGCACCTGCG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAACCACTGGGAGGCGCTaGTCGGCCCTCAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILTTGRR*SALRGS
Trigger: GGAACCCCTGAGGGCCGAGCAGCGCCTCCCAGTGGT...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAACAGTGCCTGAGATCTaGTCCCCTCGGCAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGTVPEI*SPRQRA
Trigger: GGCCCGCTGCCGAGGGGAGCAGATCTCAGGCACTGT...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCCACCAGCCCACAGTaGCTGAGATCTGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSPTSPQ*LRSAPL
Trigger: GAGGGGAGCAGATCTCAGGCACTGTGGGCTGGTGGG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTGCTGTGCCCAGGGCCTaGCGAGCCATTGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPAVPRA*RAIELA
Trigger: GGCCAGCTCAATGGCTCGGCAGGCCCTGGGCACAGC...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGCGTGGCAGTCCCGATaGTCCTCGCAGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPAWQSR*SSQSGQ
Trigger: CTGCCCACTCTGCGAGGAGCATCGGGACTGCCACGC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTAGCCAGGGCCCCGCTTaGGGCAGTGGCTGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPSQGPA*GSGCGS
Trigger: GCTTCCACAGCCACTGCCGCAAGCGGGGCCCTGGCT...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACTGGCGTTGCCGAAGCTaGCGGGCCGGCATCGTTCGC +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHWRCRS*RAGIVR
Trigger: GCGAACGATGCCGGCCCGGCAGCTTCGGCAACGCCA...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCGGACGTAGCTCAGCGTaGAGGGGGTGCTGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIGRSSA*RGCCCR
Trigger: CCGACAGCAGCACCCCCTGCACGCTGAGCTACGTCC...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGGACGTAGCTCAGCGTaGAGGGGGTGCTGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPGRSSA*RGCCCR
Trigger: CCGACAGCAGCACCCCCTGCACGCTGAGCTACGTCC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCTGGTTACAAGTTCCTaGCCCAGTGTGGGCATTGCA +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGLVTSS*PSVGIA
Trigger: TGCAATGCCCACACTGGGGCAGGAACTTGTAACCAG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAGTGTGGCCCAGGCGGTaGAGGAAGCGGCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILVWPRR*RKRLAV
Trigger: CACTGCCAGCCGCTTCCTGCACCGCCTGGGCCACAC...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGCTCCTGACACCCAGGTaGCGGTTGCCAGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVLLTPR*RLPAGT
Trigger: AGTACCAGCTGGCAACCGGCACCTGGGTGTCAGGAG...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCAGGCGGCTCCCGACTaGTGCCACAGCATGGGCCAC +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPQAAPD*CHSMGH
Trigger: GTGGCCCATGCTGTGGCAGCAGTCGGGAGCCGCCTG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAGGGCCAGGCACTCACTaGAGGTCCGGAGACGTCGAC +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGGPGTH*RSGDVD
Trigger: GTCGACGTCTCCGGACCTGCAGTGAGTGCCTGGCCC...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGGTGCAGGACCCATTaGGTCCAATGCAAGCACCTT +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGRCRTH*VQCKHL
Trigger: AAGGTGCTTGCATTGGACGCAATGGGTCCTGCACCT...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGCTCGGAGCAGTTCCCTaGCCAGAAGACCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVLGAVP*PEDLSL
Trigger: CAGCGAGAGGTCTTCTGGGCAGGGAACTGCTCCGAG...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCTCCAAACACAGTGCTaGCAGCCCCCATCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPALQTQC*QPPSAP
Trigger: GGGAGCAGATGGGGGCTGGCAGCACTGTGTTTGGAG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGGTCGTGGTGCCCGTTTaGACACTCGTCCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLVVVPV*TLVLRG
Trigger: CCCCCTGAGGACGAGTGTGCAAACGGGCACCACGAC...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGAATTCTGCGTCTCGTTaGAGTCGTGGTGCCCGTTTG +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQNSASR*SRGARL
Trigger: CAAACGGGCACCACGACTGCAACGAGACGCAGAATT...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAATTCTGCGTCTCGTTaGAGTCGTGGTGCCCGTTTG +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGNSASR*SRGARL
Trigger: CAAACGGGCACCACGACTGCAACGAGACGCAGAATT...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGAACAGCGGGAGGCACTaGTCACAGTGGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVNSGRH*SQWLPL
Trigger: CAAGGGCAGCCACTGTGAGCAGTGCCTCCCGCTGTT...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCAGCCCGTCCCATCCTaGTCGTTACATGTGTCCGCG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAQPVPS*SLHVSA
Trigger: CGCGGACACATGTAACGAGCAGGATGGGACGGGCTG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGAGCTGCCCTGGCATGTaGCCGTCTCTGTGTTATTCT +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGESCPGM*PSLCYS
Trigger: AGAATAACACAGAGACGGGCACATGCCAGGGCAGCT...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACGCCAAAGAGGACAGTaGGGCCGGGGCCTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQRQRGQ*GRGLAP
Trigger: GGGCGCTAGGCCCCGGCCGCACTGTCCTCTTTGGCG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCGGGGCCCACCATCTaGAGGGGGTGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSPGPTI*RGWWRW
Trigger: CCACCTCCACCACCCCCTGCAGATGGTGGGCCCCGG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAATGTGGGCCTGGTCCTaGCGGAAGAAGAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPMWAWS*RKKSRP
Trigger: GGGCCTGCTCTTCTTCCGGCAGGACCAGGCCCACAT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCTGCAAGTGCCGGCGCTaGTCCTGCCGCTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFICKCRR*SCRWSR
Trigger: TCTGGACCAGCGGCAGGAGCAGCGCCGGCACTTGCA...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTTGCAAGTGCCGGCGCTaGTCCTGCCGCTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLCKCRR*SCRWSR
Trigger: TCTGGACCAGCGGCAGGAGCAGCGCCGGCACTTGCA...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAATCTTGGTCATCTCCTaGAAGTGCCGGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASILVIS*KCRRCS
Trigger: GGAGCAGCGCCGGCACTTGCAGGAGATGACCAAGAT...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCATGTCAGCAGCAGGGGTaGCAGGAAGGGCTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPCQQQG*QEGLRA
Trigger: CGCTCTGAGCCCTTCCTGGCACCCCTGCTGCTGACA...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCCCCACAGTACTCGTaGAGCCTGTGCCGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSPPQYS*SLCRSV
Trigger: CACACTGCGGCACAGGCTGCACGAGTACTGTGGGGG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGACCTTATAGACGGGTaGGTCCCCAGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVDLIDG*VPRGRR
Trigger: CCTTCGCCCCCTGGGGACCCACCCGTCTATAAGGTC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGCTGAGGAAGCTTCGATaGGCGGAGGTCGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLLRKLR*AEVGCS
Trigger: GGAGCACCCGACCTCCGCCCATCGAAGCTTCCTCAG...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAAGGCTCACAGCGGCATaGTCCCAGGGGCGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILRLTAA*SQGRGA
Trigger: TGCGCCTCGCCCCTGGGACCATGCCGCTGTGAGCCT...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGTGGAACACCATGGAGTaGCCAGTGGCAGCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSWNTME*PVAAGG
Trigger: GCCCCCTGCTGCCACTGGCCACTCCATGGTGTTCCA...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGAAGGCTCGCTCCCTTaGGCCCTGAAGCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIEGSLP*ALKPIP
Trigger: CGGGATGGGCTTCAGGGCCCAAGGGAGCGAGCCTTC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGAATTGCCCAGAACACTaGCTGTGTGGAAGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQNCPEH*LCGRLA
Trigger: AGCGAGCCTTCCACACAGCCAGTGTTCTGGGCAATT...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAAAGGCCAGGCAGGCCTaGCAGTCACCCAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILKARQA*QSPRRR
Trigger: CCGCCTCCTGGGTGACTGCCAGGCCTGCCTGGCCTT...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACACGTCCTCAGCCCCTaGTCCACCTGGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILHVLSP*STWPSR
Trigger: CCTGGAGGGCCAGGTGGACCAGGGGCTGAGGACGTG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTATGCTCCTCGCAGAGTaGGCAGAGGGTAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAMLLAE*AEGRHQ
Trigger: CTGGTGCCTACCCTCTGCCCACTCTGCGAGGAGCAT...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCTCCTGGGTGCAGGCGTaGCAGTCCCGATGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFISWVQA*QSRCSS
Trigger: CGAGGAGCATCGGGACTGCCACGCCTGCACCCAGGA...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCAGGTGTGGGTGGACTaGCACCAGGCGCACTGGCTA +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSQVWVD*HQAHWL
Trigger: TAGCCAGTGCGCCTGGTGCCAGTCCACCCACACCTG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGCAGCTCCGGCACCGTaGCTCCGAGTGTACACTGTC +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVAAPAP*LRVYTV
Trigger: GACAGTGTACACTCGGAGCCACGGTGCCGGAGCTGC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGGCACCGTCCCAGTGTaGGGTTGTCCTCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAGTVPV*GCPHCH
Trigger: GTGGCAATGAGGACAACCCCACACTGGGACGGTGCC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTTTGCGGCAGTGGCTGTaGAAGCTGCAGCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSLRQWL*KLQPQS
Trigger: GGACTGTGGCTGCAGCTTCCACAGCCACTGCCGCAA...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCCCCATGTCCAGTCCTaGCACTCGTCGCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAPHVQS*HSSQKP
Trigger: TGGCTTCTGCGACGAGTGCCAGGACTGGACATGGGG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCTGAGGTTGTCGCAGTaGCCACGGCGTGGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHLRLSQ*PRRGSP
Trigger: CGGGGACCCACGCCGTGGCCACTGCGACAACCTCAG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGCCCTCGGTGTGGTCCTaGCAGAAGCAGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLPSVWS*QKQSPL
Trigger: CAGTGGGCTCTGCTTCTGCCAGGACCACACCGAGGG...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGTGGGCACCCTCGGTGTaGTCCTGGCAGAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVWAPSV*SWQKQS
Trigger: GCTCTGCTTCTGCCAGGACCACACCGAGGGTGCCCA...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCGAGCAGAGCTGGCAGTaGGCACCCTCGGTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIEQSWQ*APSVWS
Trigger: GGACCACACCGAGGGTGCCCACTGCCAGCTCTGCTC...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGAGCAGAGCTGGCAGTaGGCACCCTCGGTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIEQSWQ*APSVWS
Trigger: GGACCACACCGAGGGTGCCCACTGCCAGCTCTGCTC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGAAGGTGAGGGTGAGTaGGGGACAGAGGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPEGEGE*GTEGPG
Trigger: CCCGGGACCCTCTGTCCCCCACTCACCCTCACCTTC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACGGGTCCATCCACCATaGTGTGGCCCAGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGRVHPP*CGPGGA
Trigger: TGCACCGCCTGGGCCACACCATGGTGGATGGACCCG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCAAACATCCACAAGGTaGCATCGGGTCCATCCACCA +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGQTSTR*HRVHPP
Trigger: TGGTGGATGGACCCGATGCCACCTTGTGGATGTTTG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACCCCCAGCAGATACATaGCACCACGGCCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGPPADT*HHGQRA
Trigger: TGCCCGCTGGCCGTGGTGCCATGTATCTGCTGGGGG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAGGCAGCTCCACGGTCTaGGGGGCCTTCTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQGSSTV*GAFSCR
Trigger: GCGGCAGGAGAAGGCCCCCCAGACCGTGGAGCTGCC...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGTGACCAGCAACGGCTaGCAGCTCCACGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPVTSNG*QLHGLG
Trigger: CCCCAGACCGTGGAGCTGCCAGCCGTTGCTGGTCAC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAGGGGGTGTCCCACTCTaGGCTCCTGACACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGGGVPL*APDTQV
Trigger: CACCTGGGTGTCAGGAGCCCAGAGTGGGACACCCCC...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTTGCTCCCCAGGAACTTaGCCCAGACCCCGAGATGAG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSCSPGT*PRPRDE
Trigger: CTCATCTCGGGGTCTGGGCCAAGTTCCTGGGGAGCA...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGATGATTCCACCGGCATaGGGGACACATTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQMIPPA*GTHSAE
Trigger: CTCTGCTGAATGTGTCCCCCATGCCGGTGGAATCAT...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTCCGTGGGGCTGGTCGTaGCAATTCTGCGTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSPWGWS*QFCVSL
Trigger: CAACGAGACGCAGAATTGCCACGACCAGCCCCACGG...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCCGTTCACGCAGCCCTaGGCGCACACAGGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHPFTQP*AHTGRH
Trigger: GTGCCGCCCTGTGTGCGCCCAGGGCTGCGTGAACGG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGTGGCTGCCCTTGGTGTaGTTGCGGCAGAGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVWLPLV*LRQSKQ
Trigger: CTGCTTGCTCTGCCGCAACCACACCAAGGGCAGCCA...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCCACGACAAAAGGCGTaGCAGGGCCGGCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPPRQKA*QGRQVP
Trigger: CGGGACCTGCCGGCCCTGCCACGCCTTTTGTCGTGG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGATGATTCCCGGCACTTaGCGCACTGGTACTTGTAGC +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEMIPGT*RTGTCS
Trigger: GCTACAAGTACCAGTGCGCCAAGTGCCGGGAATCAT...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGCTAGCGCCCGGCGTTTaGGCTCATGGAAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVLAPGV*AHGSSW
Trigger: CCAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAG...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp GGCCACGCCAGCCATGCCATCTTCTGTGGGCTCGAGAGTGATGGGCCCAGCTCGAGGTGTCATAGGAGGTaGAGACATAGAGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: GHASHAIFCGLESDGPSSRCHRR*RHRGPR
Trigger: CCGTGGACCTCTATGTCTCCACCTCCTATGACACCT...CGAGCTGGGCCCATCACTCTCGAGCCCACAGAAGATGGCATGGCTGGCGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGGGGCTGGGGGTGGCTaGATGTGTACAGTATGGACG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVGAGGG*MCTVWT
Trigger: CGTCCATACTGTACACATCCAGCCACCCCCAGCCCC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACTACCTCCCGTACCCGTaGCTCTGCTGGGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHYLPYP*LCWGAR
Trigger: CCGGGCGCCCCAGCAGAGCCACGGGTACGGGAGGTA...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGGCGGCTGGCCATCTTaGTCATCTCCTGCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAGGWPS*SSPASA
Trigger: GGCACTTGCAGGAGATGACCAAGATGGCCAGCCGCC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTGGCGGCTGGCCATCTTaGTCATCTCCTGCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSGGWPS*SSPASA
Trigger: GGCACTTGCAGGAGATGACCAAGATGGCCAGCCGCC...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGGCGGCTGGCCATCTTaGTCATCTCCTGCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVGGWPS*SSPASA
Trigger: GGCACTTGCAGGAGATGACCAAGATGGCCAGCCGCC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp ACGGCCCCGAAGGTCACGTCCAGCGTCAGGCGGATGTCCACGTTGGTGAATTTGGGCGGCTGGCCATCTTaGTCATCTCCTGCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: TAPKVTSSVRRMSTLVNLGGWPS*SSPASA
Trigger: GGCACTTGCAGGAGATGACCAAGATGGCCAGCCGCC...CAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTCGGGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTTGGCGAAGGGGCGGCTaGCCATCTTGGTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAWRRGG*PSWSSP
Trigger: AGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCA...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAGGGAACCTCGTCTCTTaGTTCCTGCTTTGCCCCACG +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASGNLVS*FLLCPT
Trigger: CGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCC...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGGTGATCAGCCCACCTTaGCCTCTCAAAGTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEVISPP*PLKVLG
Trigger: TCCTAGCACTTTGAGAGGCCAAGGTGGGCTGATCAC...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTAGGAGTCCAAGGAGGTaGCTCAGGTGCGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPRSPRR*LRCGVA
Trigger: CGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCT...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ACGGCCCCGAAGGTCACGTCCAGCGTCAGGCGGATGTCCACGTTGGTGAATTTGCGGCACTTGGCGCATTaGTGCACTTCCCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TAPKVTSSVRRMSTLVNLRHLAH*CTSRPG
Trigger: TCCTGGACGGGAAGTGCACCAATGCGCCAAGTGCCG...CAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTCGGGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR TCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAAGGGGGCCGATCCCATaGACAGTGCCCAGCATTACG +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPRGPIP*TVPSIT
Trigger: CGTAATGCTGGGCACTGTTCATGGGATCGGCCCCCT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGACTCGCAGTTGCCATTaGCGCTGTAGTTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVTRSCH*RCSCPH
Trigger: GTGCGGGCAACTACAGCGTCAATGGCAACTGCGAGT...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGCAGCAGCATCTTGCCTaGGGAAGCTTCGATGGGCGG +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLQQHLA*GSFDGR
Trigger: CCGCCCATCGAAGCTTCCTCAGGCAAGATGCTGCTG...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCAGCAGCATCTTGCCTaGGGAAGCTTCGATGGGCGG +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSQQHLA*GSFDGR
Trigger: CCGCCCATCGAAGCTTCCTCAGGCAAGATGCTGCTG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACCCACACGTCGTTGGTaGGCGAGCCGTCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILPTRRW*ASRQPA
Trigger: AGCTGGCTGACGGCTCGCTCACCAACGACGTGTGGG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCCCACACGTCGTTGGTaGGCGAGCCGTCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPPTRRW*ASRQPA
Trigger: AGCTGGCTGACGGCTCGCTCACCAACGACGTGTGGG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACCCTGCCCAGTGGACTaGAGGCCCACACGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILPCPVD*RPTRRW
Trigger: CCAACGACGTGTGGGCCTTCAGTCCACTGGGCAGGG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGGGCAAGCTCAGCTCCTaGCACCCATTGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLGKLSS*HPLMAA
Trigger: GGCTGCCATCAATGGGTGTCAGGAGCTGAGCTTGCC...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGGCAAGCTCAGCTCCTaGCACCCATTGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVGKLSS*HPLMAA
Trigger: GGCTGCCATCAATGGGTGTCAGGAGCTGAGCTTGCC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGCGGCTGCTGAAAGGTaGGCAAGTGCAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIAAAER*ASAGQA
Trigger: TGCCTGGCCTGCACTTGCTCACCTTTCAGCAGCCGC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCACGCTGGGTGTTAGGGTaGTGGTCGTGCTGCGGACAA +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPRWVLG*WSCCGQ
Trigger: TTGTCCGCAGCACGACCATCACCCTAACACCCAGCG...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR TCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGGCCTGCCGAGCCATTaGGCTGGCCCTGGATCTCTA +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPGLPSH*AGPGSL
Trigger: TAGAGATCCAGGGCCAGCTCAATGGCTCGGCAGGCC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAAGTGACACTCGTAGCTaGGGGGCGTGTTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPSDTRS*GACSGR
Trigger: CCTGCCTGAACACGCCCCTCAGCTACGAGTGTCACT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGAGAAGCAGAGCCCACTaGGGTTGTCGCAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSRSRAH*GCRSGH
Trigger: GTGGCCACTGCGACAACCTCAGTGGGCTCTGCTTCT...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACTGAGGACACGTTGGTaGGGAGGGCGCGACCCCCAC +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQLRTRW*GGRDPH
Trigger: GTGGGGGTCGCGCCCTCCTCACCAACGTGTCCTCAG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTTCTCGCTTTGCCCCCTaGGAAGGGGCCAGCAGACTC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPSRFAP*EGASRL
Trigger: GAGTCTGCTGGCCCCTTCTCAGGGGGCAAAGCGAGA...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAATTCCCGGAACCCCCATaGCCCAGGCTGCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQFPEPP*PRLLPR
Trigger: CCTGGGGAGCAGCCTGGGTCATGGGGGTTCCGGGAA...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGTTACAAGCTTCAGGTaGGGACAGCAGGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSVTSFR*GQQAAG
Trigger: CCCTGCCGCCTGCTGTCCTCACCTGAAGCTTGTAAC...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGTTACAAGCTTCAGGTaGGGACAGCAGGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPVTSFR*GQQAAG
Trigger: CCCTGCCGCCTGCTGTCCTCACCTGAAGCTTGTAAC...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGTCTCCCCTGTCCTCTTaGACTGCCGCGTCCACATGC +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVSPLSS*TAASTC
Trigger: GCATGTGGACGCGGCAGTTCAAGAGGACAGGGGAGA...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCATCACGGGGGCCGCTaGGTCCACCCTCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSHHGGR*VHPPCS
Trigger: GCTGCATGGAGGGTGGACTCAGCGGCCCCCGTGATG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTGTCGGGCTCCACACATaGGCCGTTCACGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPVGLHT*AVHAAL
Trigger: CAGGGCTGCGTGAACGGCTCATGTGTGGAGCCCGAC...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAAGAAGCGGCTCGACTTaGGGGCATGGTGCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPRSGST*GHGARV
Trigger: CACACGAGCACCATGCCCTCAAGTCGAGCCGCTTCT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCTGTGGGCTCGAGAGTaGTGGGCCCAGCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHLWARE*WAQLAA
Trigger: GGCTGCGAGCTGGGCCCATCACTCTCGAGCCCACAG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCTGTGTGCATGTGCACTaGTTGTCTCCCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGCVHVH*LSPFTR
Trigger: TCTGGTGAAGGGAGACAATCAGTGCACATGCACACA...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCAGACCCAATCCCTTTaGTCACCCACCCTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVQTQSL*SPTLAS
Trigger: GGAGGCGAGGGTGGGTGAGCAAAGGGATTGGGTCTG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAATTACGGACTCAGGCTaGTGCAGGCCAAACGGACCT +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASITDSG*CRPNGP
Trigger: AGGTCCGTTTGGCCTGCAGCAGCCTGAGTCCGTAAT...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGGTGAGGCCCTGCAAATaGGACCTCTATAGGCATAAC +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEVRPCK*DLYRHN
Trigger: GTTATGCCTATAGAGGTCGCATTTGCAGGGCCTCAC...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCCCGGGGTGAGGCCCTaGAAATGCGACCTCTATAGG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVPGVRP*KCDLYR
Trigger: CCTATAGAGGTCGCATTTGCAGGGCCTCACCCCGGG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCCGGGGTGAGGCCCTaGAAATGCGACCTCTATAGG +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSPGVRP*KCDLYR
Trigger: CCTATAGAGGTCGCATTTGCAGGGCCTCACCCCGGG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACCATGGCCAGAACCTTaGCCAGGGCCATCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILPWPEP*PGPSPP
Trigger: AGGCGGCGATGGCCCTGGGCAAGGTTCTGGCCATGG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAAGGCCAAAACCAGTaGCATGGCCAGAACCTTGCC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASQGQNQ*HGQNLA
Trigger: GGCAAGGTTCTGGCCATGGCACTGGTTTTGGCCTTG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAATCCAGCAGGATCCGGTaGTGGGGGCTTGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQSSRIR*WGLGAS
Trigger: CGAGGCCCCAAGCCCCCAGCACCGGATCCTGCTGGA...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCTGGCCTCCGAAAACTaGCAGCAGCCCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFILASEN*QQPWWG
Trigger: TCCCCACCAGGGCTGCTGGCAGTTTTCGGAGGCCAG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCCTGGCCTCCGAAAACTaGCAGCAGCCCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSILASEN*QQPWWG
Trigger: TCCCCACCAGGGCTGCTGGCAGTTTTCGGAGGCCAG...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTAGAGGTCGTGCGGGGTaGGGCCTCCAGACACATATA +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPARGRAG*GLQTHI
Trigger: TATATGTGTCTGGAGGCCGCACCCCGCACGACCTCT...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAGAGGAGAAGAGGTCGTaGGGGGTGCGGCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILEEKRS*GVRPPD
Trigger: GTCTGGAGGCCGCACCCCGCACGACCTCTTCTCCTC...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGAGGAGAAGAGGTCGTaGGGGGTGCGGCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHEEKRS*GVRPPD
Trigger: GTCTGGAGGCCGCACCCCGCACGACCTCTTCTCCTC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCCACCAACAGGACGCTaGCACCAAGCACCGCAGCTA +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVPPTGR*HQAPQL
Trigger: TAGCTGCGGTGCTTGGTGGCAGCGTCCTGTTGGTGG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGGTCCCAGGAGGGGGTaGAGCTTGGCAGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHGPRRG*SLAGSL
Trigger: CAAGGAGCCTGCCAAGCTGCACCCCCTCCTGGGACC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACACAGTGCCTGAGATCTaGTCCCCTCGGCAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHTVPEI*SPRQRA
Trigger: GGCCCGCTGCCGAGGGGAGCAGATCTCAGGCACTGT...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTGCTGTGCCCAGGGCCTaGCGAGCCATTGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSAVPRA*RAIELA
Trigger: GGCCAGCTCAATGGCTCGGCAGGCCCTGGGCACAGC...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTAGAAGGAGATCTCGCTaGCTCCTGGCACACCAGTCC +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSRRRSR*LLAHQS
Trigger: GGACTGGTGTGCCAGGAGGCAGCGAGATCTCCTTCT...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCATGCCGCGTCCCCTTTaGGGCTGGTGCTCTGATGCC +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIMPRPL*GWCSDA
Trigger: GGCATCAGAGCACCAGCCGCAAAGGGGACGCGGCAT...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTAGGTCAGTCGCTGGCTaGAGAGCGGGGGACACTCCT +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPRSVAG*RAGDTP
Trigger: AGGAGTGTCCCCCGCTCTGCAGCCAGCGACTGACCT...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGGTTGCAGTGTGAGATaGCATCACCCTGGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAGCSVR*HHPGSP
Trigger: GGGGCTACCAGGGTGATGGCATCTCACACTGCAACC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACCAAGCACGTGCGGTTaGAGTGTGAGATGCCATCAC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASPSTCG*SVRCHH
Trigger: GTGATGGCATCTCACACTGCAACCGCACGTGCTTGG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGGTCCCCGTGCCCGTTaGACTGGCAGGGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIGPRAR*TGRAGS
Trigger: GCTGCCGGCCCTGCCAGTGCAACGGGCACGGGGACC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTATCAGCGTGCAGGGGGTaGTGCTGTCGGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILSACRG*CCRGRR
Trigger: CCTTCTCCCCCGACAGCAGCACCCCCTGCACGCTGA...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAGTCTCCCAGACCAGCTaGCCGCCATCCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGVSQTS*PPSSLV
Trigger: CACCAAGCTGGATGGCGGGCAGCTGGTCTGGGAGAC...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGGGCACATATGCGGCTaGATGGAAGGAGCGGGGCGA +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIGHICG*MEGAGR
Trigger: TCGCCCCGCTCCTTCCATGCAGCCGCATATGTGCCC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCACCCAGGTGCCGGTTaGCAGCTGGTACTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPHPGAG*QLVLQQ
Trigger: CTGCTGGAGTACCAGCTGGCAACCGGCACCTGGGTG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACCAGCAGACTCCAGGTaGGGTCAGGACAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGPADSR*GQDSAG
Trigger: CCCTGCACTGTCCTGACCGCACCTGGAGTCTGCTGG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGTCATTCTCAGAGGTaGAGGACCCATTGCGTCCAA +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGSHSQR*RTHCVQ
Trigger: TTGGACGCAATGGGTCCTGCACCTCTGAGAATGACT...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCACTTGCCCTCCCGCGTaGACTGCTCGCAGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFITCPPA*TARSQQ
Trigger: CTGCTGACTGCGAGCAGTGCACGCGGGAGGGCAAGT...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCACTCCAAACACAGTGCTaGCAGCCCCCATCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPLQTQC*QPPSAP
Trigger: GGGAGCAGATGGGGGCTGGCAGCACTGTGTTTGGAG...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTCTGCTCCAAACACAGTaGTGCCAGCCCCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSLLQTQ*CQPPSA
Trigger: AGCAGATGGGGGCTGGCAGCACTGTGTTTGGAGCAG...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGACTGCTGCAGGCTGCTaGTCCAAACACAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVTAAGC*SKHSAA
Trigger: GGCAGCACTGTGTTTGGAGCAGCAGCCTGCAGCAGT...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGGGCTCAGACACTGCTaGAGGCTGCTGCTCCAAACA +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAGLRHC*RLLLQT
Trigger: TGTTTGGAGCAGCAGCCTGCAGCAGTGTCTGAGCCC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGAGCCGGTCTTGCAGCTaGACTCATAGCCGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLSRSCS*THSRGA
Trigger: AGCCCCACGGCTATGAGTGCAGCTGCAAGACCGGCT...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTATTCACTGTGGCGGTTaGAGCGGCATTCCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSIHCGG*SGIPWS
Trigger: GCTCCACGGAATGCCGCTGCAACCGCCACAGTGAAT...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAAACAGCGGGAGGCACTaGTCACAGTGGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPNSGRH*SQWLPL
Trigger: CAAGGGCAGCCACTGTGAGCAGTGCCTCCCGCTGTT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCTTGGTGAATTTGGGCTaGACGCCAAAGAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGLVNLG*TPKRTV
Trigger: CACTGTCCTCTTTGGCGTGCAGCCCAAATTCACCAA...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCCGTACCCGTGGCTCTaGTGGGGCGCCCGGCCCACT +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIPYPWL*WGARPT
Trigger: AGTGGGCCGGGCGCCCCAGCAGAGCCACGGGTACGG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAGCGGACCACCAGCACTaGCGACGGCTCCGTCACCGT +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQADHQH*RRLRHR
Trigger: ACGGTGACGGAGCCGTCGGCAGTGCTGGTGGTCCGC...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGAAGAAGAGCAGGCCCTaGGAGTCGGCTGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLKKSRP*ESAEPL
Trigger: CAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTT...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCAGGCTAGGTTCGGATaGTCCAGGAGAGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAQARFG*SRRDSS
Trigger: GGAGGAGTCTCTCCTGGACCATCCGAACCTAGCCTG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGACCTTATAGACGGGTaGGTCCCCAGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPDLIDG*VPRGRR
Trigger: CCTTCGCCCCCTGGGGACCCACCCGTCTATAAGGTC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTACTGCTGACAGGCTCTaGAAGCCGAGGGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPTADRL*KPRAEP
Trigger: GGGCTCAGCCCTCGGCTTCCAGAGCCTGTCAGCAGT...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCTGCTCCCACTTAGACTaGCAAGCAGCGGCCCTCGCG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFICSHLD*QAAALA
Trigger: CGCGAGGGCCGCTGCTTGCCAGTCTAAGTGGGAGCA...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCTGAGGAAGCTTCGATaGGCGGAGGTCGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFILRKLR*AEVGCS
Trigger: GGAGCACCCGACCTCCGCCCATCGAAGCTTCCTCAG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCACACACCCGGTGGCTaGCACTGCCCGTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHHTPGG*HCPWLW
Trigger: CCAGAGCCACGGGCAGTGCCAGCCACCGGGTGTGTG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACACACACCCGGTGGCTaGCACTGCCCGTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQHTPGG*HCPWLW
Trigger: CCAGAGCCACGGGCAGTGCCAGCCACCGGGTGTGTG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTTGGAACACCATGGAGTaGCCAGTGGCAGCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPWNTME*PVAAGG
Trigger: GCCCCCTGCTGCCACTGGCCACTCCATGGTGTTCCA...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTAGAACACTGGCTGTGTaGAAGGCTCGCTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPARTLAV*KARSLG
Trigger: CCCAAGGGAGCGAGCCTTCCACACAGCCAGTGTTCT...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTGCCCTCAGGGGTTCCTaGCGGGGCAAGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSALRGS*RGKLSS
Trigger: GGAGCTGAGCTTGCCCCGCCAGGAACCCCTGAGGGC...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTTCTACTGCATACTTGTaGTCCCGCCCAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPASTAYL*SRPGRG
Trigger: CCCTCTGCCTGGGCGGGACCACAAGTATGCAGTAGA...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCCATTGAGCTGGCCCTaGATCTCTACTGCATACTTG +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQPLSWP*ISTAYL
Trigger: CAAGTATGCAGTAGAGATCCAGGGCCAGCTCAATGG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGATCTCGCTGCCTCCTaGCACACCAGTCCGATCCCA +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSDLAAS*HTSPIP
Trigger: TGGGATCGGACTGGTGTGCCAGGAGGCAGCGAGATC...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCAATGGGCTCCGCCCTaGCGCAGGTGGCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSQWAPP*RRWQVA
Trigger: TGCCACCTGCCACCTGCGCCAGGGCGGAGCCCATTG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGATGCTCCTCGCAGAGTaGGCAGAGGGTAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSMLLAE*AEGRHQ
Trigger: CTGGTGCCTACCCTCTGCCCACTCTGCGAGGAGCAT...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTTCCTGGGTGCAGGCGTaGCAGTCCCGATGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPSWVQA*QSRCSS
Trigger: CGAGGAGCATCGGGACTGCCACGCCTGCACCCAGGA...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGATCACAGAAGGGGTCCTaGGTGCAGGCGTGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGSQKGS*VQAWQS
Trigger: GGACTGCCACGCCTGCACCCAGGACCCCTTCTGTGA...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGCGTCCCCTTTGCGGCTaGTGCTCTGATGCCACTCAC +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLRPLCG*CSDATH
Trigger: GTGAGTGGCATCAGAGCACCAGCCGCAAAGGGGACG...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGATCACAGGTCAGTCGCTaGCTGCAGAGCGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGSQVSR*LQSGGH
Trigger: GTGTCCCCCGCTCTGCAGCCAGCGACTGACCTGTGA...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTTCACAGGTCAGTCGCTaGCTGCAGAGCGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPSQVSR*LQSGGH
Trigger: GTGTCCCCCGCTCTGCAGCCAGCGACTGACCTGTGA...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGGAAGCAGGTGTGGGTaGACTGGCACCAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIGSRCG*TGTRRT
Trigger: AGTGCGCCTGGTGCCAGTCCACCCACACCTGCTTCC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGCAGCTCCGGCACCGTaGCTCCGAGTGTACACTGTC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPAAPAP*LRVYTV
Trigger: GACAGTGTACACTCGGAGCCACGGTGCCGGAGCTGC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGTTGCGGCAGTGGCTGTaGAAGCTGCAGCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSLRQWL*KLQPQS
Trigger: GGACTGTGGCTGCAGCTTCCACAGCCACTGCCGCAA...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCCCTCGGTGTGGTCCTaGCAGAAGCAGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPPSVWS*QKQSPL
Trigger: CAGTGGGCTCTGCTTCTGCCAGGACCACACCGAGGG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGATGGGCACCCTCGGTGTaGTCCTGGCAGAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGWAPSV*SWQKQS
Trigger: GCTCTGCTTCTGCCAGGACCACACCGAGGGTGCCCA...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGAGGCTGCGGTCCGACTaGACAACACCAGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVRLRSD*TTPVSR
Trigger: CCTGGACACTGGTGTTGTCCAGTCGGACCGCAGCCT...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAATGGGGCACGCATTCCTaGGGGACGGGACAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQWGTHS*GTGQLP
Trigger: CGGGAGCTGTCCCGTCCCCCAGGAATGCGTGCCCCA...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGAAGGAGCGGGGCGATaGGCCTGGGCCCCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIEGAGR*AWAPVL
Trigger: GAGGACGGGGGCCCAGGCCCATCGCCCCGCTCCTTC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGACATATGCGGCTGCATaGAAGGAGCGGGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVTYAAA*KERGDG
Trigger: CCCATCGCCCCGCTCCTTCCATGCAGCCGCATATGT...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCCCCCAGCAGATACATaGCACCACGGCCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHPPADT*HHGQRA
Trigger: TGCCCGCTGGCCGTGGTGCCATGTATCTGCTGGGGG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGGACCATAGAGACCTGTaGGGGGTGTCCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLDHRDL*GVSHSG
Trigger: CCCAGAGTGGGACACCCCCCACAGGTCTCTATGGTC...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTCCCCAAGAACCACCATaGTGTCCCCTAACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSPQEPP*CPLTGL
Trigger: CAGCCCTGTTAGGGGACACCATGGTGGTTCTTGGGG...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTGCACACCAGCCGCAATaGGGGCGCCGCAGGCACAAG +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSAHQPQ*GRRRHK
Trigger: CTTGTGCCTGCGGCGCCCCCATTGCGGCTGGTGTGC...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGTCTCGTTGCAGTCGTaGTGCCCGTTTGCACACTCG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVVSLQS*CPFAHS
Trigger: CGAGTGTGCAAACGGGCACCACGACTGCAACGAGAC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCTGTCATGTTGTCCATaGTATAGCCGGTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGLSCCP*YSRSCS
Trigger: GCTGCAAGACCGGCTATACCATGGACAACATGACAG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCCAGCGCATTCACTGTaGCGGTTGCAGCGGCATTCC +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVPAHSL*RLQRHS
Trigger: GGAATGCCGCTGCAACCGCCACAGTGAATGCGCTGG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCCACGACAAAAGGCGTaGCAGGGCCGGCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHPRQKA*QGRQVP
Trigger: CGGGACCTGCCGGCCCTGCCACGCCTTTTGTCGTGG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAAGTCTCGACGGTCACTaGGGGAGCTGCCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGSLDGH*GSCPGM
Trigger: CATGCCAGGGCAGCTCCCCCAGTGACCGTCGAGACT...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGGGGCTGGGGGTGGCTaGATGTGTACAGTATGGACG +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSGAGGG*MCTVWT
Trigger: CGTCCATACTGTACACATCCAGCCACCCCCAGCCCC...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTTGGTGGGGCTGGGGGTaGCTGGATGTGTACAGTATG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAWWGWG*LDVYSM
Trigger: CATACTGTACACATCCAGCCACCCCCAGCCCCACCA...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCTGGAGGTGGTGGGGCTaGGGGTGGCTGGATGTGTAC +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIWRWWG*GWLDVY
Trigger: GTACACATCCAGCCACCCCCAGCCCCACCACCTCCA...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAACCATCTGCAGGGGGTaGTGGAGGTGGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILTICRG*WRWWGW
Trigger: CCAGCCCCACCACCTCCACCACCCCCTGCAGATGGT...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGGCATGGTGCTCGTGTaGGTAGGTGATGACCAGCCG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVGMVLV*VGDDQP
Trigger: CGGCTGGTCATCACCTACCCACACGAGCACCATGCC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAAGTCGGCTGAGCCGTTaGCGCCGGGCCCACTTGGGT +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQSRLSR*RRAHLG
Trigger: ACCCAAGTGGGCCCGGCGCCAACGGCTCAGCCGACT...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCTGGCGAAGGGGCGGCTaGCCATCTTGGTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: MSEGHAGEVVLAQQSLPAWRRGG*PSWSSP
Trigger: AGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCA...GGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTCTGGTGAGGTTGTCCTaGCTCAACAGTCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSLVRLS*LNSPFR
Trigger: CCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAG...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCCATCTGGGCAACCCTaGGGGAAGGGGGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHPSGQP*GKGASG
Trigger: ACCACTGGCCCCCTTCCCCCAGGGTTGCCCAGATGG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACAGGAGTCCAAGGAGGTaGCTCAGGTGCGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHRSPRR*LRCGVA
Trigger: CGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCT...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACTGACATGCACGCATTaGCTAGGGCCTCTCACACTG +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASLTCTH*LGPLTL
Trigger: CAGTGTGAGAGGCCCTAGCCAATGCGTGCATGTCAG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCGGCACTTGGCGCATTaGTGCACTTCCCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSRHLAH*CTSRPG
Trigger: TCCTGGACGGGAAGTGCACCAATGCGCCAAGTGCCG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378073.5
3UTR CAA 72 bp CCGAAGGTCACGTCCAGCGTCAGGCGGATGTCCACGTaGGTGAATTTGGGCTGCACGCCAAAGAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: PKVTSSVRRMST*VNLGCTPKRTV
Trigger: CACTGTCCTCTTTGGCGTGCAGCCCAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR TCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTAGGGGGCCGATCCCATaGACAGTGCCCAGCATTACG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPRGPIP*TVPSIT
Trigger: CGTAATGCTGGGCACTGTTCATGGGATCGGCCCCCT...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCAGGGAGAAGCGGAATaGGGCGTTAAAGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVQGEAE*GVKAQQ
Trigger: CTGCTGGGCTTTAACGCCTCATTCCGCTTCTCCCTG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCACACCCAGGGCATTGTTaGGGTCCTGGCCTCCGAAAA +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPHPGHC*GPGLRK
Trigger: TTTTCGGAGGCCAGGACCTCAACAATGCCCTGGGTG...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGCACCCAGGGCATTGTTaGGGTCCTGGCCTCCGAAAA +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLHPGHC*GPGLRK
Trigger: TTTTCGGAGGCCAGGACCTCAACAATGCCCTGGGTG...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCACCGCAGCTACATGTaGGTACCGACCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPHRSYM*VPTTGR
Trigger: CCTCCCAGTGGTCGGTACTCACATGTAGCTGCGGTG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGTATTGGGCGGCTGCTaGAAGGTGAGCAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSVLGGC*KVSKCR
Trigger: CCTGCACTTGCTCACCTTTCAGCAGCCGCCCAATAC...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAGGCCTGCCGAGCCATTaGGCTGGCCCTGGATCTCTA +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILGLPSH*AGPGSL
Trigger: TAGAGATCCAGGGCCAGCTCAATGGCTCGGCAGGCC...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCAGAAGCAGAGCCCACTaGGGTTGTCGCAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIRSRAH*GCRSGH
Trigger: GTGGCCACTGCGACAACCTCAGTGGGCTCTGCTTCT...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCGCAGAAGGCAGCTATaGGGCTGCGGTCCGACTGGA +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHRRRQL*GCGPTG
Trigger: TCCAGTCGGACCGCAGCCTCATAGCTGCCTTCTGCG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTAGAGGCGGCTGTCCATaGGGGTCTCCCAGACCAGCT +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPRGGCP*GSPRPA
Trigger: AGCTGGTCTGGGAGACCCTCATGGACAGCCGCCTCT...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCCGCCGCTCACTCACTaGGTACCTGTACAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVPPLTH*VPVQVS
Trigger: GGAAACCTGTACAGGTACTCAGTGAGTGAGCGGCGG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACTCTCGCTTTGCCCCCTaGGAAGGGGCCAGCAGACTC +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHSRFAP*EGASRL
Trigger: GAGTCTGCTGGCCCCTTCTCAGGGGGCAAAGCGAGA...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGCCAGGCATTGCAGTTaGCCTGGTAGAGCAGAACGT +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVARHCS*PGRAER
Trigger: ACGTTCTGCTCTACCAGGTCAACTGCAATGCCTGGC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGTCAGCAGAGAGTGGCTaGAGCACGTCCAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVSAESG*STSSHR
Trigger: CCTATGACTGGACGTGCTTCAGCCACTCTCTGCTGA...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCAGAAGCGGCTCGACTTaGGGGCATGGTGCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIRSGST*GHGARV
Trigger: CACACGAGCACCATGCCCTCAAGTCGAGCCGCTTCT...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTAGAAGCGGCTCGACTTaGGGGCATGGTGCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPRSGST*GHGARV
Trigger: CACACGAGCACCATGCCCTCAAGTCGAGCCGCTTCT...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCATCCCTAGTTGGACCTaGGTGAAGAGATGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGIPSWT*VKRCLK
Trigger: CTTCAGACATCTCTTCACTCAGGTCCAACTAGGGAT...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTTCCAGCTTTGCTGTGTaGCCCTGGTCCCCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPSSFAV*PWSPVR
Trigger: CCTCACCGGGGACCAGGGTCACACAGCAAAGCTGGA...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTACGGACTCAGGCTGCTaGAGGCCAAACGGACCTTAT +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPATDSGC*RPNGPY
Trigger: ATAAGGTCCGTTTGGCCTGCAGCAGCCTGAGTCCGT...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCTGGGCGGAGGTCGGGTaGTCCCACTTAGACTGGCAA +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIWAEVG*SHLDWQ
Trigger: TTGCCAGTCTAAGTGGGAGCACCCGACCTCCGCCCA...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGAATAGCCCCCGCTGGTaGTGTCAAGGCGGAAACGGA +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLNSPRW*CQGGNG
Trigger: TCCGTTTCCGCCTTGACAGCACCAGCGGGGGCTATT...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCTCCTTGGCACCAACTaGATTCCGGGTCCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPLLGTN*IPGPGS
Trigger: GCTCCCGGGACCCGGAATGCAGTTGGTGCCAAGGAG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAGGTCCCAGGAGGGGGTaGAGCTTGGCAGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQGPRRG*SLAGSL
Trigger: CAAGGAGCCTGCCAAGCTGCACCCCCTCCTGGGACC...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGAGGAAGAATAGGAGGTaGAGGACGACGAGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVRKNRR*RTTSGR
Trigger: CCTACCGCTCGTCGTCCTGCACCTCCTATTCTTCCT...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCACCACACTCGTGGCTCTaGAGACACTCATGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPPHSWL*RHSWQV
Trigger: GACCTGCCATGAGTGTCTGCAGAGCCACGAGTGTGG...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGGTTGCAGTGTGAGATaGCATCACCCTGGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVGCSVR*HHPGSP
Trigger: GGGGCTACCAGGGTGATGGCATCTCACACTGCAACC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTAGTCCTCCAAGCACGTaGGGTTGCAGTGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPASPPST*GCSVRC
Trigger: GCATCTCACACTGCAACCGCACGTGCTTGGAGGACT...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACGGTCCCCGTGCCCGTTaGACTGGCAGGGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHGPRAR*TGRAGS
Trigger: GCTGCCGGCCCTGCCAGTGCAACGGGCACGGGGACC...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACGGCGTGGGTCCCCGTaGCCGTTGCACTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSRRGSP*PLHWQG
Trigger: GCCCTGCCAGTGCAACGGGCACGGGGACCCACGCCG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAGCCAGCGGGCACATATaGGGCTGCATGGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILASGHI*GCMEGA
Trigger: CGCTCCTTCCATGCAGCCGCATATGTGCCCGCTGGC...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCAGCGGGCACATATaGGGCTGCATGGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHASGHI*GCMEGA
Trigger: CGCTCCTTCCATGCAGCCGCATATGTGCCCGCTGGC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGCGGCTCCCGACTGCTaGCACAGCATGGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHAAPDC*HSMGHR
Trigger: TCTGTGGCCCATGCTGTGGCAGCAGTCGGGAGCCGC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAGGGCCAGGCACTCACTaGAGGTCCGGAGACGTCGAC +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQGPGTH*RSGDVD
Trigger: GTCGACGTCTCCGGACCTGCAGTGAGTGCCTGGCCC...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCTCTCCATCTCCAGGTTaGAGGGTCCGAGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFISPSPG*RVRGWR
Trigger: CCGCCATCCTCGGACCCTGCAACCTGGAGATGGAGA...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGACCCATTGCGTCCAATaGAAGCACCTTCGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVTHCVQ*KHLRGS
Trigger: ACTGCCCCGAAGGTGCTTGCATTGGACGCAATGGGT...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCCCTCCCGCGTGCACTaGTCGCAGTCAGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIPSRVH*SQSAAP
Trigger: CGGGGCTGCTGACTGCGAGCAGTGCACGCGGGAGGG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAGCGTCCACATGCACTTaGCCTCCCGCGTGCACTGCT +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILASTCT*PPACTA
Trigger: AGCAGTGCACGCGGGAGGGCAAGTGCATGTGGACGC...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGCCTGTCCTCTTGAACTaGCGCGTCCACATGCACTTG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVPVLLN*RVHMHL
Trigger: CAAGTGCATGTGGACGCGGCAGTTCAAGAGGACAGG...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGACTGCTGCAGGCTGCTaGTCCAAACACAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLTAAGC*SKHSAA
Trigger: GGCAGCACTGTGTTTGGAGCAGCAGCCTGCAGCAGT...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGGCTCAGACACTGCTaGAGGCTGCTGCTCCAAACA +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPGLRHC*RLLLQT
Trigger: TGTTTGGAGCAGCAGCCTGCAGCAGTGTCTGAGCCC...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCATCGTTGCAGTCGTGGTaGCCGTTTGCACACTCGTCC +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPSLQSW*PFAHSS
Trigger: GGACGAGTGTGCAAACGGGCACCACGACTGCAACGA...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAATTCACTGTGGCGGTTaGAGCGGCATTCCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPIHCGG*SGIPWS
Trigger: GCTCCACGGAATGCCGCTGCAACCGCCACAGTGAAT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCCAGCCCGTCCCATCCTaGTCGTTACATGTGTCCGCG +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIQPVPS*SLHVSA
Trigger: CGCGGACACATGTAACGAGCAGGATGGGACGGGCTG...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAGGTCACTGGGGGAGCTaGCCTGGCATGTGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQGHWGS*PGMCPS
Trigger: AGACGGGCACATGCCAGGGCAGCTCCCCCAGTGACC...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR GCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTAAGAAGAGCAGGCCCTaGGAGTCGGCTGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPKKSRP*ESAEPL
Trigger: CAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTT...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCAAGAAGAGCAGGCCCTaGGAGTCGGCTGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIKKSRP*ESAEPL
Trigger: CAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTT...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACGCAGGCGCCGTTGGGTaGATGGGGCCCGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHAGAVG*MGPARQ
Trigger: CTGCCTGGCGGGCCCCATGCACCCAACGGCGCCTGC...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCCCACCCCAGGGCCTCTaGCTTTGCTTCCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIPPQGL*LCFPKL
Trigger: GAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGG...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGCCAGACTCCCTCATTaGCAGCACCCTACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPARLPH*QHPTPA
Trigger: GGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTTGGGCTGTCTCAGGGTaGCATCTGTCTCTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSWAVSG*HLSLSS
Trigger: GCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCA...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTTCTGGAACAGGGCTGTaGACTGACGGTACCGGCATT +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPASGTGL*TDGTGI
Trigger: AATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGA...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCACTTGGCGCATTGGTaGACTTCCCGTCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVHLAHW*TSRPGG
Trigger: TCCTCCTGGACGGGAAGTGCACCAATGCGCCAAGTG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTATCAGGGGTTCGGGCCTaGACCCCACAGACCCAATCC +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILSGVRA*TPQTQS
Trigger: GGATTGGGTCTGTGGGGTCCAGGCCCGAACCCCTGA...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAACTGCTGACAGGCTCTaGAAGCCGAGGGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILTADRL*KPRAEP
Trigger: GGGCTCAGCCCTCGGCTTCCAGAGCCTGTCAGCAGT...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCACAGGCCGTAAAAACCTaGAGAGGACCCTCTACCCGG +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPQAVKT*RGPSTR
Trigger: CCGGGTAGAGGGTCCTCTCCAGGTTTTTACGGCCTG...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCAGGCCGTAAAAACCTaGAGAGGACCCTCTACCCGG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVQAVKT*RGPSTR
Trigger: CCGGGTAGAGGGTCCTCTCCAGGTTTTTACGGCCTG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGAAGACTCCCAGGTGTTaGCGGAGAAGTTGTATAGGA +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGEKTPRC*RRSCIG
Trigger: TCCTATACAACTTCTCCGCCAACACCTGGGAGTCTT...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGTGGCCCCTGCCCAGTaGACTGAAGGCCCACACGTC +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHVAPAQ*TEGPHV
Trigger: GACGTGTGGGCCTTCAGTCCACTGGGCAGGGGCCAC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGGGGCCCCGAGGAGCTaGAGGCAGGTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIGAPRS*RQVVPG
Trigger: TCCTGGCACCACCTGCCTCCAGCTCCTCGGGGCCCC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCCCCAATAGCCCCCGCTaGTGCTGTCAAGGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIPNSPR*CCQGGN
Trigger: GTTTCCGCCTTGACAGCACCAGCGGGGGCTATTGGG...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTTGGAACACCATGGAGTaGCCAGTGGCAGCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPWNTME*PVAAGG
Trigger: GCCCCCTGCTGCCACTGGCCACTCCATGGTGTTCCA...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCAGAGAACCGGGCAGTaGAGGGCCGGTGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHQRTGQ*RAGVHH
Trigger: ATGGTGGACACCGGCCCTCCACTGCCCGGTTCTCTG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGTGAGTACCGACCACTaGGAGGCGCTGCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHVSTDH*EALLGP
Trigger: AGGGCCGAGCAGCGCCTCCCAGTGGTCGGTACTCAC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGCGGGAGCAGACGCTGTaGTCTGTGTACATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLREQTL*SVYMEQ
Trigger: CTGCTCCATGTACACAGACCACAGCGTCTGCTCCCG...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGCTTGGCAGGCTCCTTaGCACCAACTGCATTCCGGG +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIAWQAP*HQLHSG
Trigger: CCCGGAATGCAGTTGGTGCCAAGGAGCCTGCCAAGC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAGAGACCTTGTCAGGCTaGGAGGTATTGGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGETLSG*EVLGGC
Trigger: GCAGCCGCCCAATACCTCCCAGCCTGACAAGGTCTC...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCCCTCCAGGCAGCATTaGGTAGATGAAGCCACGGTA +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAPSRQH*VDEATV
Trigger: TACCGTGGCTTCATCTACCCAATGCTGCCTGGAGGG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGCCGAGCCATTGAGCTaGCCCTGGATCTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVAEPLS*PWISTA
Trigger: TGCAGTAGAGATCCAGGGCCAGCTCAATGGCTCGGC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGATCTCGCTGCCTCCTaGCACACCAGTCCGATCCCA +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPDLAAS*HTSPIP
Trigger: TGGGATCGGACTGGTGTGCCAGGAGGCAGCGAGATC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTATGGCACCAGGCGCACTaGCTAGAGTTGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILWHQAH*LELARQ
Trigger: CTGCCTGGCCAACTCTAGCCAGTGCGCCTGGTGCCA...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTTGGCACCAGGCGCACTaGCTAGAGTTGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPWHQAH*LELARQ
Trigger: CTGCCTGGCCAACTCTAGCCAGTGCGCCTGGTGCCA...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGGAAGCAGGTGTGGGTaGACTGGCACCAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHGSRCG*TGTRRT
Trigger: AGTGCGCCTGGTGCCAGTCCACCCACACCTGCTTCC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTCTCTGCAGACACTCATaGCAGGTCAGGAAGCCATCG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSLCRHS*QVRKPS
Trigger: CGATGGCTTCCTGACCTGCCATGAGTGTCTGCAGAG...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCACCAGCCACACTCGTaGCTCTGCAGACACTCATGG +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSHQPHS*LCRHSW
Trigger: CCATGAGTGTCTGCAGAGCCACGAGTGTGGCTGGTG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGCAGTGGCCACGGCGTaGGTCCCCGTGCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIAVATA*VPVPVA
Trigger: TGCAACGGGCACGGGGACCCACGCCGTGGCCACTGC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTATCCCCATAATAGCCTaGGGAGCAGAGCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSIPIIA*GAELAV
Trigger: CACTGCCAGCTCTGCTCCCCAGGCTATTATGGGGAT...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGATCCCCATAATAGCCTaGGGAGCAGAGCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVIPIIA*GAELAV
Trigger: CACTGCCAGCTCTGCTCCCCAGGCTATTATGGGGAT...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAGAAGGTGAGGGTGAGTaGGGGACAGAGGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQEGEGE*GTEGPG
Trigger: CCCGGGACCCTCTGTCCCCCACTCACCCTCACCTTC...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAAGTGTCCAGGAAGCGTaGGAATCCATCAAACGCCAG +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASSVQEA*ESIKRQ
Trigger: CTGGCGTTTGATGGATTCCCACGCTTCCTGGACACT...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCAGGCTGCGGTCCGACTaGACAACACCAGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIRLRSD*TTPVSR
Trigger: CCTGGACACTGGTGTTGTCCAGTCGGACCGCAGCCT...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGGTGCAGGAAGCGGCTaGCAGTGTCGGCTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHGAGSG*QCRLRG
Trigger: GCCTCTCAGCCGACACTGCCAGCCGCTTCCTGCACC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCGGGTCCATCCACCATaGTGTGGCCCAGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHRVHPP*CGPGGA
Trigger: TGCACCGCCTGGGCCACACCATGGTGGATGGACCCG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTACATATGCGGCTGCATaGAAGGAGCGGGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPTYAAA*KERGDG
Trigger: CCCATCGCCCCGCTCCTTCCATGCAGCCGCATATGT...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTGTGCCGGTTGCCAGCTaGTACTCCAGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPVPVAS*YSSSCW
Trigger: CCAGCAGCTGCTGGAGTACCAGCTGGCAACCGGCAC...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCTGCTCCCCAGGAACTTaGCCCAGACCCCGAGATGAG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFICSPGT*PRPRDE
Trigger: CTCATCTCGGGGTCTGGGCCAAGTTCCTGGGGAGCA...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACTGCAGGGTCCGAGGATaGCGGGCCAGGCACTCACTG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHCRVRG*RARHSL
Trigger: CAGTGAGTGCCTGGCCCGCCATCCTCGGACCCTGCA...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAATGCAGGGTCCGAGGATaGCGGGCCAGGCACTCACTG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQCRVRG*RARHSL
Trigger: CAGTGAGTGCCTGGCCCGCCATCCTCGGACCCTGCA...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCACCTTCGGGGCAGTTaGTACACCACTTACAGCGGG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVHLRGS*YTTYSG
Trigger: CCCGCTGTAAGTGGTGTACCAACTGCCCCGAAGGTG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGTCTCGTTGCAGTCGTaGTGCCCGTTTGCACACTCG +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSVSLQS*CPFAHS
Trigger: CGAGTGTGCAAACGGGCACCACGACTGCAACGAGAC...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCCGTTCACGCAGCCCTaGGCGCACACAGGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIPFTQP*AHTGRH
Trigger: GTGCCGCCCTGTGTGCGCCCAGGGCTGCGTGAACGG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACGGCAGAGCAAGCAGTaGTCACGCGCCCCAACACCA +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILRQSKQ*SRAPTP
Trigger: TGGTGTTGGGGCGCGTGACCACTGCTTGCTCTGCCG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTTGGCTGCCCTTGGTGTaGTTGCGGCAGAGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLWLPLV*LRQSKQ
Trigger: CTGCTTGCTCTGCCGCAACCACACCAAGGGCAGCCA...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCACAGTGGCTGCCCTTaGTGTGGTTGCGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPHSGCP*CGCGRA
Trigger: TGCTCTGCCGCAACCACACCAAGGGCAGCCACTGTG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAATGATTCCCGGCACTTaGCGCACTGGTACTTGTAGC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASMIPGT*RTGTCS
Trigger: GCTACAAGTACCAGTGCGCCAAGTGCCGGGAATCAT...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTTGGAAGCAGTTGGTCTaGGACGTGGGGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPWKQLV*DVGSRQ
Trigger: CTGCCTGGACCCCACGTCCCAGACCAACTGCTTCCA...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCTAGCGCCCGGCGTTTaGGCTCATGGAAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLLAPGV*AHGSSW
Trigger: CCAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAG...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAACCATCTGCAGGGGGTaGTGGAGGTGGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQTICRG*WRWWGW
Trigger: CCAGCCCCACCACCTCCACCACCCCCTGCAGATGGT...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGGCATGGTGCTCGTGTaGGTAGGTGATGACCAGCCG +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIGMVLV*VGDDQP
Trigger: CGGCTGGTCATCACCTACCCACACGAGCACCATGCC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCAGGTCAATGTGGGCCTaGTCCTGCCGGAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: MSEGHAGEVVLAQQSLPARSMWA*SCRKKS
Trigger: GCTCTTCTTCCGGCAGGACCAGGCCCACATTGACCT...GGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGACAAACAGGTCAATGTaGGCCTGGTCCTGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVTNRSM*AWSCRK
Trigger: CTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGT...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTACAAACAGGTCAATGTaGGCCTGGTCCTGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPATNRSM*AWSCRK
Trigger: CTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGT...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCTGGTGAGGTTGTCCTaGCTCAACAGTCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSLVRLS*LNSPFR
Trigger: CCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCCTGGTGAGGTTGTCCTaGCTCAACAGTCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: MSEGHAGEVVLAQQSLPALVRLS*LNSPFR
Trigger: CCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAG...GGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGGGGAAGGGGGCCAGTaGTCTCCAAGTAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVGEGGQ*SPSRQC
Trigger: ACACTGTCTACTTGGAGACCACTGGCCCCCTTCCCC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCCATCTGGGCAACCCTaGGGGAAGGGGGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHPSGQP*GKGASG
Trigger: ACCACTGGCCCCCTTCCCCCAGGGTTGCCCAGATGG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACAAAGGAGGCCCCATCTaGGCAACCCTGGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHKGGPI*ATLGEG
Trigger: CCCTTCCCCCAGGGTTGCCCAGATGGGGCCTCCTTT...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCTGACATGCACGCATTaGCTAGGGCCTCTCACACTG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPALTCTH*LGPLTL
Trigger: CAGTGTGAGAGGCCCTAGCCAATGCGTGCATGTCAG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTAGGGGGCCGATCCCATaGACAGTGCCCAGCATTACG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPRGPIP*TVPSIT
Trigger: CGTAATGCTGGGCACTGTTCATGGGATCGGCCCCCT...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCAGCAGCATCTTGCCTaGGGAAGCTTCGATGGGCGG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPQQHLA*GSFDGR
Trigger: CCGCCCATCGAAGCTTCCTCAGGCAAGATGCTGCTG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCATGTAGTTGGCATCACTaGAGAGGTGCAGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASCSWHH*RGAAAS
Trigger: AGATGCTGCTGCACCTCTTCAGTGATGCCAACTACA...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACACGGCCACATGGGAGTaGCGGGCAGCCGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHTATWE*RAAGAG
Trigger: TCCTGCCCCGGCTGCCCGTCACTCCCATGTGGCCGT...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTGCGGCTGCTGAAAGGTaGGCAAGTGCAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSAAAER*ASAGQA
Trigger: TGCCTGGCCTGCACTTGCTCACCTTTCAGCAGCCGC...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGGCCTGCCGAGCCATTaGGCTGGCCCTGGATCTCTA +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHGLPSH*AGPGSL
Trigger: TAGAGATCCAGGGCCAGCTCAATGGCTCGGCAGGCC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCGTGCGGTTGCAGTGTaGGATGCCATCACCCTGGTA +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPRAVAV*DAITLV
Trigger: TACCAGGGTGATGGCATCTCACACTGCAACCGCACG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACGTGCGGTTGCAGTGTaGGATGCCATCACCCTGGTA +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGRAVAV*DAITLV
Trigger: TACCAGGGTGATGGCATCTCACACTGCAACCGCACG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTAGCCCACCGAAGCATTaGAGCCCCAGGATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPSPPKH*SPRMRS
Trigger: GCTCCTCATCCTGGGGCTTCAATGCTTCGGTGGGCT...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCTTCCCGGAACCCCCATaGCCCAGGCTGCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIFPEPP*PRLLPR
Trigger: CCTGGGGAGCAGCCTGGGTCATGGGGGTTCCGGGAA...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGCTCCTTCAGGTGAGGTaGGATTTCCTCCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVLLQVR*DFLQET
Trigger: GGTTTCCTGGAGGAAATCTCACCTCACCTGAAGGAG...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGGGCTCCTTCAGGTaGGGTGAGATTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPRGSFR*GEISSR
Trigger: CCTGGAGGAAATCTCACCTCACCTGAAGGAGCCCCG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTGCAGAACGTCGCTGCTaGACTCGTCAGGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSAERRC*TRQGPS
Trigger: GCTCGGACCCTGACGAGTTCAGCAGCGACGTTCTGC...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGAGAGGGACATGCTGGTaGGGTTGTCCTGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSRGTCW*GCPGST
Trigger: TGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCT...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCAGAGGGACATGCTGGTaGGGTTGTCCTGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: MSEGHAGEVVLAQQSLPARGTCW*GCPGST
Trigger: TGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCT...GGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR TCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTTCCAGCTTTGCTGTGTaGCCCTGGTCCCCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSSSFAV*PWSPVR
Trigger: CCTCACCGGGGACCAGGGTCACACAGCAAAGCTGGA...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCAGACCCAATCCCTTTaGTCACCCACCCTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHQTQSL*SPTLAS
Trigger: GGAGGCGAGGGTGGGTGAGCAAAGGGATTGGGTCTG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGATTACGGACTCAGGCTaGTGCAGGCCAAACGGACCT +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLITDSG*CRPNGP
Trigger: AGGTCCGTTTGGCCTGCAGCAGCCTGAGTCCGTAAT...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAGTGAGGCCCTGCAAATaGGACCTCTATAGGCATAAC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASVRPCK*DLYRHN
Trigger: GTTATGCCTATAGAGGTCGCATTTGCAGGGCCTCAC...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCAAGGCCAAAACCAGTaGCATGGCCAGAACCTTGCC +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSQGQNQ*HGQNLA
Trigger: GGCAAGGTTCTGGCCATGGCACTGGTTTTGGCCTTG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGACAGGTAGTCATACGTaGACTCTGTGTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RGQESKEVAQVRGGASGETGSHT*TLCPGK
Trigger: TTTTCCTGGACACAGAGTGCACGTATGACTACCTGT...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACTGGGCGGAGGTCGGGTaGTCCCACTTAGACTGGCAA +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHWAEVG*SHLDWQ
Trigger: TTGCCAGTCTAAGTGGGAGCACCCGACCTCCGCCCA...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACCCCGGTGGCTGGCACTaGCCGTGGCTCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHPGGWH*PWLWQP
Trigger: TGGCTGCCAGAGCCACGGGCAGTGCCAGCCACCGGG...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACAGGAAGGCGCCAGCTaGCCCAATACGGGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILQEGAS*PNTGRE
Trigger: TTCTCTGCCCGTATTGGGGCAGCTGGCGCCTTCCTG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAAGAGGTCGTGCGGGGTaGGGCCTCCAGACACATATA +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGRGRAG*GLQTHI
Trigger: TATATGTGTCTGGAGGCCGCACCCCGCACGACCTCT...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTAATAGCCCCCGCTGGTaGTGTCAAGGCGGAAACGGA +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPNSPRW*CQGGNG
Trigger: TCCGTTTCCGCCTTGACAGCACCAGCGGGGGCTATT...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACCCACCAGCCCACAGTaGCTGAGATCTGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQPTSPQ*LRSAPL
Trigger: GAGGGGAGCAGATCTCAGGCACTGTGGGCTGGTGGG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGCCCTGGATCTCTACTaGATACTTGTGGTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIALDLY*ILVVPP
Trigger: GGGCGGGACCACAAGTATGCAGTAGAGATCCAGGGC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGCCCCGCCGGCTGCATaGCGCGTCCCCTTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSAPPAA*RVPFAA
Trigger: AGCCGCAAAGGGGACGCGGCATGCAGCCGGCGGGGC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACAGGTCAGTCGCTGGCTaGAGAGCGGGGGACACTCCT +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHRSVAG*RAGDTP
Trigger: AGGAGTGTCCCCCGCTCTGCAGCCAGCGACTGACCT...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCCCACACTCGTGGCTCTaGAGACACTCATGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIPHSWL*RHSWQV
Trigger: GACCTGCCATGAGTGTCTGCAGAGCCACGAGTGTGG...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCCCCAGTGTGGGCATTaGAGTTCTCAGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVPQCGH*SSQDTE
Trigger: CTCTGTGTCCTGAGAACTGCAATGCCCACACTGGGG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACAGCCCTCGGCACAGATaGACACACCCAGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHSPRHR*THPGSG
Trigger: ACCAGAGCCTGGGTGTGTGCATCTGTGCCGAGGGCT...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAGTCTCCCAGACCAGCTaGCCGCCATCCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQVSQTS*PPSSLV
Trigger: CACCAAGCTGGATGGCGGGCAGCTGGTCTGGGAGAC...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGTGTGGCCCAGGCGGTaGAGGAAGCGGCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIVWPRR*RKRLAV
Trigger: CACTGCCAGCCGCTTCCTGCACCGCCTGGGCCACAC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTTTCTCCTGCCGCCATTaGAGGGTGGTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPFSCRH*RVVRLR
Trigger: CCTCAACCTCACCACCCTGCAATGGCGGCAGGAGAA...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCTCCTGACACCCAGGTaGCGGTTGCCAGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHLLTPR*RLPAGT
Trigger: AGTACCAGCTGGCAACCGGCACCTGGGTGTCAGGAG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCTCCTGACACCCAGGTaGCGGTTGCCAGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPLLTPR*RLPAGT
Trigger: AGTACCAGCTGGCAACCGGCACCTGGGTGTCAGGAG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACATACGATCTCGCTTTaGCCCCTGAGAAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGHTISL*PLRRGQ
Trigger: CTGGCCCCTTCTCAGGGGGCAAAGCGAGATCGTATG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCAGGGGGCAGGGTCAGTaGCAGCAGGCGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSRGQGQ*QQAAQG
Trigger: GCCCTGGGCCGCCTGCTGGCACTGACCCTGCCCCCT...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTATCTCCATCTCCAGGTTaGAGGGTCCGAGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILSPSPG*RVRGWR
Trigger: CCGCCATCCTCGGACCCTGCAACCTGGAGATGGAGA...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGACCCATTGCGTCCAATaGAAGCACCTTCGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSTHCVQ*KHLRGS
Trigger: ACTGCCCCGAAGGTGCTTGCATTGGACGCAATGGGT...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGCCTGTCCTCTTGAACTaGCGCGTCCACATGCACTTG +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLPVLLN*RVHMHL
Trigger: CAAGTGCATGTGGACGCGGCAGTTCAAGAGGACAGG...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCCTGTCCTCTTGAACTaGCGCGTCCACATGCACTTG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVPVLLN*RVHMHL
Trigger: CAAGTGCATGTGGACGCGGCAGTTCAAGAGGACAGG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGCTGCACGGAGAGGATaGGGCGGGTCTCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIAARRG*GGSPLS
Trigger: GGACAGGGGAGACCCGCCGCATCCTCTCCGTGCAGC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTCCAAACACAGTGCTaGCAGCCCCCATCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILLQTQC*QPPSAP
Trigger: GGGAGCAGATGGGGGCTGGCAGCACTGTGTTTGGAG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAGTCGTGGTGCCCGTTTaGACACTCGTCCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQVVVPV*TLVLRG
Trigger: CCCCCTGAGGACGAGTGTGCAAACGGGCACCACGAC...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGATCGTTGCAGTCGTGGTaGCCGTTTGCACACTCGTCC +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGSLQSW*PFAHSS
Trigger: GGACGAGTGTGCAAACGGGCACCACGACTGCAACGA...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTAATTCTGCGTCTCGTTaGAGTCGTGGTGCCCGTTTG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSNSASR*SRGARL
Trigger: CAAACGGGCACCACGACTGCAACGAGACGCAGAATT...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGTGGTCGTGGCAATTCTaGGTCTCGTTGCAGTCGTGG +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVWSWQF*VSLQSW
Trigger: CCACGACTGCAACGAGACGCAGAATTGCCACGACCA...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTTGGTATAGCCGGTCTTaGAGCTGCACTCATAGCCGT +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAWYSRS*SCTHSR
Trigger: ACGGCTATGAGTGCAGCTGCAAGACCGGCTATACCA...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACAACAGCGGGAGGCACTaGTCACAGTGGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHNSGRH*SQWLPL
Trigger: CAAGGGCAGCCACTGTGAGCAGTGCCTCCCGCTGTT...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCATTGGTGAATTTGGGCTaGACGCCAAAGAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASLVNLG*TPKRTV
Trigger: CACTGTCCTCTTTGGCGTGCAGCCCAAATTCACCAA...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTATGTGGGCCTGGTCCTaGCGGAAGAAGAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSMWAWS*RKKSRP
Trigger: GGGCCTGCTCTTCTTCCGGCAGGACCAGGCCCACAT...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp AAGAAGACGGAGAAGAAGACAAACAGGTCAATGTGGGCCTGGTCCTGCCGGAAGTGTCAGCAGCAGGGGTaGCAGGAAGGGCTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: KKTEKKTNRSMWAWSCRKCQQQG*QEGLRA
Trigger: CGCTCTGAGCCCTTCCTGGCACCCCTGCTGCTGACA...CTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGTCTTCTTCTCCGTCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR GCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCTGGAGGCCTCACAGTaGTTCTCCCTCTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPLEASQ*FSLSEA
Trigger: GGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCAGGGCCTCTGCCTTTaGTTCCCAAAGCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPQGLCL*FPKLFP
Trigger: CGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCTGTCTCTTTCCAGCTaGTTCCCTCGCCAGCGCTAT +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVLSLSS*FPRQRY
Trigger: ATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGACCTTATAGACGGGTaGGTCCCCAGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHDLIDG*VPRGRR
Trigger: CCTTCGCCCCCTGGGGACCCACCCGTCTATAAGGTC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGGAAGGCCCTGTATATaGAGTCATTATGGACGGGGC +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVGRPCI*SHYGRG
Trigger: GCCCCGTCCATAATGACTCCATATACAGGGCCTTCC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTACTGCTGACAGGCTCTaGAAGCCGAGGGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSTADRL*KPRAEP
Trigger: GGGCTCAGCCCTCGGCTTCCAGAGCCTGTCAGCAGT...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAATGCTCCCACTTAGACTaGCAAGCAGCGGCCCTCGCG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQCSHLD*QAAALA
Trigger: CGCGAGGGCCGCTGCTTGCCAGTCTAAGTGGGAGCA...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTTGCTCCCACTTAGACTaGCAAGCAGCGGCCCTCGCG +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSCSHLD*QAAALA
Trigger: CGCGAGGGCCGCTGCTTGCCAGTCTAAGTGGGAGCA...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCACACACCCGGTGGCTaGCACTGCCCGTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIHTPGG*HCPWLW
Trigger: CCAGAGCCACGGGCAGTGCCAGCCACCGGGTGTGTG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGCATTGTTGAGGTCCTaGCCTCCGAAAACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSALLRS*PPKTAS
Trigger: GCTGGCAGTTTTCGGAGGCCAGGACCTCAACAATGC...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACGGGGCCCCGAGGAGCTaGAGGCAGGTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHGAPRS*RQVVPG
Trigger: TCCTGGCACCACCTGCCTCCAGCTCCTCGGGGCCCC...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGGCCGGTGTCCACCATaGACCAGCAGGGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIGRCPP*TSRARE
Trigger: CTCCCGTGCCCTGCTGGTCCATGGTGGACACCGGCC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAAGGACGTGTAGGCGCTaGGCCCGCGTCCACACGGCC +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSRTCRR*ARVHTA
Trigger: GGCCGTGTGGACGCGGGCCCAGCGCCTACACGTCCT...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCGCCGAGCCATTGAGCTaGCCCTGGATCTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIAEPLS*PWISTA
Trigger: TGCAGTAGAGATCCAGGGCCAGCTCAATGGCTCGGC...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGATCTCGCTGCCTCCTaGCACACCAGTCCGATCCCA +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHDLAAS*HTSPIP
Trigger: TGGGATCGGACTGGTGTGCCAGGAGGCAGCGAGATC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGGCGCAGGTGGCAGGTaGCACTGGTCAGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIGAGGR*HWSGTS
Trigger: GCTGGTGCCTGACCAGTGCCACCTGCCACCTGCGCC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCCCTCGGTGTGGTCCTaGCAGAAGCAGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHPSVWS*QKQSPL
Trigger: CAGTGGGCTCTGCTTCTGCCAGGACCACACCGAGGG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGCTGTAGCTCCTCAGTaGCCGAGACAACCCACACAC +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIAVAPQ*PRQPTH
Trigger: GTGTGTGGGTTGTCTCGGCCACTGAGGAGCTACAGC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAGCTGTAGCTCCTCAGTaGCCGAGACAACCCACACAC +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGAVAPQ*PRQPTH
Trigger: GTGTGTGGGTTGTCTCGGCCACTGAGGAGCTACAGC...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGTTCCTGCCCCAGTGTaGGCATTGCAGTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPVPAPV*ALQFSG
Trigger: TCCTGAGAACTGCAATGCCCACACTGGGGCAGGAAC...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCACACACACCCAGGCTCTaGTTACAAGTTCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPHTPRL*LQVPAP
Trigger: TGGGGCAGGAACTTGTAACCAGAGCCTGGGTGTGTG...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCATCCACCATGGTGTaGCCCAGGCGGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSPSTMV*PRRCRK
Trigger: CTTCCTGCACCGCCTGGGCCACACCATGGTGGATGG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACCATCCACCATGGTGTaGCCCAGGCGGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQPSTMV*PRRCRK
Trigger: CTTCCTGCACCGCCTGGGCCACACCATGGTGGATGG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTTACTCCAGCAGCTGCTaGTTGAAGCCATTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSYSSSC*LKPFSG
Trigger: CCCGGAAAATGGCTTCAACCAGCAGCTGCTGGAGTA...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGTACTCCAGCAGCTGCTaGTTGAAGCCATTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVYSSSC*LKPFSG
Trigger: CCCGGAAAATGGCTTCAACCAGCAGCTGCTGGAGTA...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGTGCCGGTTGCCAGCTaGTACTCCAGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHVPVAS*YSSSCW
Trigger: CCAGCAGCTGCTGGAGTACCAGCTGGCAACCGGCAC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCCCCAAGAACCACCATaGTGTCCCCTAACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIPQEPP*CPLTGL
Trigger: CAGCCCTGTTAGGGGACACCATGGTGGTTCTTGGGG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAACTGCTGCCACAGCATaGGCCACAGACTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPTAATA*ATDSSI
Trigger: AATGGAGGAGTCTGTGGCCCATGCTGTGGCAGCAGT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGAAGACCTCTCGCTaGTTGATCCGACAGTCATTC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASQKTSR*LIRQSF
Trigger: GAATGACTGTCGGATCAACCAGCGAGAGGTCTTCTG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGGCAGGAGGTACAGTTaGGTAGGAGGTGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIGRRYS*VGGDKG
Trigger: CCCCTTGTCACCTCCTACCCAACTGTACCTCCTGCC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCGTCTCGTTGCAGTCGTaGTGCCCGTTTGCACACTCG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIVSLQS*CPFAHS
Trigger: CGAGTGTGCAAACGGGCACCACGACTGCAACGAGAC...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTATGCAGCGGCATTCCGTaGAGCAGTTGCGGCCCACAA +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILCSGIP*SSCGPQ
Trigger: TTGTGGGCCGCAACTGCTCCACGGAATGCCGCTGCA...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACCAGCGCATTCACTGTaGCGGTTGCAGCGGCATTCC +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILPAHSL*RLQRHS
Trigger: GGAATGCCGCTGCAACCGCCACAGTGAATGCGCTGG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCGGCAGAGCAAGCAGTaGTCACGCGCCCCAACACCA +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSRQSKQ*SRAPTP
Trigger: TGGTGTTGGGGCGCGTGACCACTGCTTGCTCTGCCG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACTGGCTGCCCTTGGTGTaGTTGCGGCAGAGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHWLPLV*LRQSKQ
Trigger: CTGCTTGCTCTGCCGCAACCACACCAAGGGCAGCCA...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAAGTTGGTCTGGGACGTaGGGTCCAGGCAGCACTCCT +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILSWSGT*GPGSTP
Trigger: AGGAGTGCTGCCTGGACCCCACGTCCCAGACCAACT...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTATGGAAGCAGTTGGTCTaGGACGTGGGGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILWKQLV*DVGSRQ
Trigger: CTGCCTGGACCCCACGTCCCAGACCAACTGCTTCCA...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCTAGCGCCCGGCGTTTaGGCTCATGGAAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHLAPGV*AHGSSW
Trigger: CCAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTAGCGCCCGGCGTTTaGGCTCATGGAAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILLAPGV*AHGSSW
Trigger: CCAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGTGGATGTGTACAGTATaGACGCCAGTGTCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSWMCTV*TPVSGA
Trigger: GGCCCCTGACACTGGCGTCCATACTGTACACATCCA...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTGGGGCTGGGGGTGGCTaGATGTGTACAGTATGGACG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPGAGGG*MCTVWT
Trigger: CGTCCATACTGTACACATCCAGCCACCCCCAGCCCC...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCATACCCGTGGCTCTGCTaGGGCGCCCGGCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSYPWLC*GARPTA
Trigger: AGCAGTGGGCCGGGCGCCCCAGCAGAGCCACGGGTA...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTGGCATGGTGCTCGTGTaGGTAGGTGATGACCAGCCG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPGMVLV*VGDDQP
Trigger: CGGCTGGTCATCACCTACCCACACGAGCACCATGCC...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTAGGTCAATGTGGGCCTaGTCCTGCCGGAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPRSMWA*SCRKKS
Trigger: GCTCTTCTTCCGGCAGGACCAGGCCCACATTGACCT...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp ATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCACAAACAGGTCAATGTaGGCCTGGTCCTGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: MSEGHAGEVVLAQQSLPATNRSM*AWSCRK
Trigger: CTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGT...GGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACCAGTGGTGGCGGGGATaGCTGGTGGGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHQWWRG*LVGSSP
Trigger: GGGGCTGCTGCCCACCAGCCATCCCCGCCACCACTG...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCGGGGAAGGGGGCCAGTaGTCTCCAAGTAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIGEGGQ*SPSRQC
Trigger: ACACTGTCTACTTGGAGACCACTGGCCCCCTTCCCC...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACAAAGGAGGCCCCATCTaGGCAACCCTGGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHKGGPI*ATLGEG
Trigger: CCCTTCCCCCAGGGTTGCCCAGATGGGGCCTCCTTT...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGGGAACCTCGTCTCTTaGTTCCTGCTTTGCCCCACG +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIGNLVS*FLLCPT
Trigger: CGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGGGGTTTCACCATATTaGCCAGGCTGGTCACGAACT +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVGVSPY*PGWSRT
Trigger: AGTTCGTGACCAGCCTGGCCAATATGGTGAAACCCC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTGGGGTTTCACCATATTaGCCAGGCTGGTCACGAACT +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSGVSPY*PGWSRT
Trigger: AGTTCGTGACCAGCCTGGCCAATATGGTGAAACCCC...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp ACGGCCCCGAAGGTCACGTCCAGCGTCAGGCGGATGTCCACGTTGGTGAATTTGGGGGTTTCACCATATTaGCCAGGCTGGTCACGAACT +
Preference number: 4 (lower is better)
Translates to: TAPKVTSSVRRMSTLVNLGVSPY*PGWSRT
Trigger: AGTTCGTGACCAGCCTGGCCAATATGGTGAAACCCC...CAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTCGGGGCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCCCTCCGAAGCCGGATaGGCCAGATCAGAGAGACGA +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPPSEAG*ARSERR
Trigger: TCGTCTCTCTGATCTGGCCCATCCGGCTTCGGAGGG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCTCTATAGGCATAACATaGCCTTGTAGATCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGSIGIT*PCRSKR
Trigger: CCTCTTCGATCTACAAGGTCATGTTATGCCTATAGA...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACGCCGCCTCCTGCACTaGCCCTTAGAGCGGGGACAG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSRRLLH*PLERGQ
Trigger: CTGTCCCCGCTCTAAGGGTCAGTGCAGGAGGCGGCG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACACTCGCAGTTGCCATTaGCGCTGTAGTTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHTRSCH*RCSCPH
Trigger: GTGCGGGCAACTACAGCGTCAATGGCAACTGCGAGT...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACAGGGAGAAGCGGAATaGGGCGTTAAAGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILQGEAE*GVKAQQ
Trigger: CTGCTGGGCTTTAACGCCTCATTCCGCTTCTCCCTG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCAGCATTGGGTAGATaGAGCCACGGTAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHAALGR*SHGRPG
Trigger: CCCTGGTCTACCGTGGCTTCATCTACCCAATGCTGC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR TCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGCTGGCAGTGTCGGCTaGGAGGCGGCTGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIAGSVG*EAAVHE
Trigger: CTCATGGACAGCCGCCTCTCAGCCGACACTGCCAGC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACCCCACTCTGGGCTCCTaGCACCCAGGTGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHPTLGS*HPGAGC
Trigger: GCAACCGGCACCTGGGTGTCAGGAGCCCAGAGTGGG...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGCCCAGACCCCGAGATaGGCCACGCACATTCCTCAT +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHAQTPR*ATHIPH
Trigger: ATGAGGAATGTGCGTGGCTCATCTCGGGGTCTGGGC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGCTCCTTCAGGTGAGGTaGGATTTCCTCCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLLLQVR*DFLQET
Trigger: GGTTTCCTGGAGGAAATCTCACCTCACCTGAAGGAG...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGCCAGGCATTGCAGTTaGCCTGGTAGAGCAGAACGT +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPARHCS*PGRAER
Trigger: ACGTTCTGCTCTACCAGGTCAACTGCAATGCCTGGC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGCCAGGCATTGCAGTTaGCCTGGTAGAGCAGAACGT +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIARHCS*PGRAER
Trigger: ACGTTCTGCTCTACCAGGTCAACTGCAATGCCTGGC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCAGAGGCCGAGCGGGTaGGGTCGGGCAGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSQRPSG*GRAEAR
Trigger: CCTGGCTTCTGCCCGACCTCACCCGCTCGGCCTCTG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGTTACAAGCTTCAGGTaGGGACAGCAGGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHVTSFR*GQQAAG
Trigger: CCCTGCCGCCTGCTGTCCTCACCTGAAGCTTGTAAC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGTCGGGCTCCACACATaGGCCGTTCACGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIVGLHT*AVHAAL
Trigger: CAGGGCTGCGTGAACGGCTCATGTGTGGAGCCCGAC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGGTCTCTGTGTTATTCTaGCATGGACAGCCCGTCCCA +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLVSVLF*HGQPVP
Trigger: TGGGACGGGCTGTCCATGTCAGAATAACACAGAGAC...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR TCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAGGATGTCCACGTTGGTaGATTTGGGCTGCACGCCAA +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGGCPRW*IWAARQ
Trigger: TTGGCGTGCAGCCCAAATTCACCAACGTGGACATCC...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGGATGTCCACGTTGGTaGATTTGGGCTGCACGCCAA +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIGCPRW*IWAARQ
Trigger: TTGGCGTGCAGCCCAAATTCACCAACGTGGACATCC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTGGATGTCCACGTTGGTaGATTTGGGCTGCACGCCAA +
Preference number: 4 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLGCPRW*IWAARQ
Trigger: TTGGCGTGCAGCCCAAATTCACCAACGTGGACATCC...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR TCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGAACTCTTGACCTTGTaGTCAGCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIELLTL*SAHLGL
Trigger: GAGGCCAAGGTGGGCTGATCACAAGGTCAAGAGTTC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGTACACATCCCACATCTaGGCCAGACTCCCTCATTGC +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVYTSHI*ARLPHC
Trigger: GCAATGAGGGAGTCTGGCTCAGATGTGGGATGTGTA...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAACGGACTCAGGCTGCTaGAGGCCAAACGGACCTTAT +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGTDSGC*RPNGPY
Trigger: ATAAGGTCCGTTTGGCCTGCAGCAGCCTGAGTCCGT...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAAATAGCCCCCGCTGGTaGTGTCAAGGCGGAAACGGA +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILNSPRW*CQGGNG
Trigger: TCCGTTTCCGCCTTGACAGCACCAGCGGGGGCTATT...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAAGACCACCATGTAATTaGCCAGAACACTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASRPPCN*PEHWLC
Trigger: ACACAGCCAGTGTTCTGGGCAATTACATGGTGGTCT...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGGGTGGTAGAAGAAGATaGCATCTTCGTAGCACTTTT +
Preference number: 4 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQGGRRR*HLRSTF
Trigger: AAAAGTGCTACGAAGATGGCATCTTCTTCTACCACC...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAAGGCAGCTCTCATTGTaGACGCACCAGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQRQLSL*THQPRV
Trigger: CACCCTGGGCTGGTGCGTGCACAATGAGAGCTGCCT...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACAGGCAGCTCTCATTGTaGACGCACCAGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHRQLSL*THQPRV
Trigger: CACCCTGGGCTGGTGCGTGCACAATGAGAGCTGCCT...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAAGGAAGAATAGGAGGTaGAGGACGACGAGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGRKNRR*RTTSGR
Trigger: CCTACCGCTCGTCGTCCTGCACCTCCTATTCTTCCT...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGATGGGGTTGTCCTCATTaGCACACCAGCCACACTCGT +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGWGCPH*HTSHTR
Trigger: ACGAGTGTGGCTGGTGTGGCAATGAGGACAACCCCA...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTGGTTGCAGTGTGAGATaGCATCACCCTGGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPGCSVR*HHPGSP
Trigger: GGGGCTACCAGGGTGATGGCATCTCACACTGCAACC...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCCAAGCACGTGCGGTTaGAGTGTGAGATGCCATCAC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPPSTCG*SVRCHH
Trigger: GTGATGGCATCTCACACTGCAACCGCACGTGCTTGG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAAGCCCTCGGCACAGATaGACACACCCAGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQSPRHR*THPGSG
Trigger: ACCAGAGCCTGGGTGTGTGCATCTGTGCCGAGGGCT...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCATACGATCTCGCTTTaGCCCCTGAGAAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHHTISL*PLRRGQ
Trigger: CTGGCCCCTTCTCAGGGGGCAAAGCGAGATCGTATG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTAGTCATTCTCAGAGGTaGAGGACCCATTGCGTCCAA +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSSHSQR*RTHCVQ
Trigger: TTGGACGCAATGGGTCCTGCACCTCTGAGAATGACT...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCAAGGCGCACTGAGTTaGCTGAGCACAGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSQGALS*LSTAQG
Trigger: TCCCTGGGCTGTGCTCAGGCAACTCAGTGCGCCTTG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTAGCCGGTCTTGCAGCTaGACTCATAGCCGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSSRSCS*THSRGA
Trigger: AGCCCCACGGCTATGAGTGCAGCTGCAAGACCGGCT...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGTGGTATAGCCGGTCTTaGAGCTGCACTCATAGCCGT +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVWYSRS*SCTHSR
Trigger: ACGGCTATGAGTGCAGCTGCAAGACCGGCTATACCA...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAATTCCGTGGAGCAGTTaGGGCCCACAAAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPIPWSS*GPQSQS
Trigger: ACTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAAT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTTGCCCTTGGTGTGGTTaGGGCAGAGCAAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPCPWCG*GRASSG
Trigger: ACCACTGCTTGCTCTGCCGCAACCACACCAAGGGCA...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTATGCCCTTGGTGTGGTTaGGGCAGAGCAAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILCPWCG*GRASSG
Trigger: ACCACTGCTTGCTCTGCCGCAACCACACCAAGGGCA...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAACTCCTTCCTGGAGATaGAGATGTGGCTATTTCCAC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASTPSWR*RCGYFH
Trigger: GTGGAAATAGCCACATCTGCATCTCCAGGAAGGAGT...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp AAGCAGACGGTGACCTTGGCGAAGGGGCGGCTGGCCATCTTGGTCATCTCCTGCACTCCTTCCTGGAGATaGAGATGTGGCTATTTCCAC +
Preference number: 4 (lower is better)
Translates to: KQTVTLAKGRLAILVISCTPSWR*RCGYFH
Trigger: GTGGAAATAGCCACATCTGCATCTCCAGGAAGGAGT...GCAGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCAAGGTCACCGTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR GCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTTTGGTGAATTTGGGCTaGACGCCAAAGAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPALVNLG*TPKRTV
Trigger: CACTGTCCTCTTTGGCGTGCAGCCCAAATTCACCAA...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCCGGGGCCCACCATCTaGAGGGGGTGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSPGPTI*RGWWRW
Trigger: CCACCTCCACCACCCCCTGCAGATGGTGGGCCCCGG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACGCGGACCACCAGCACTaGCGACGGCTCCGTCACCGT +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHADHQH*RRLRHR
Trigger: ACGGTGACGGAGCCGTCGGCAGTGCTGGTGGTCCGC...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAATACTCGTGCAGCCTGTaGCGCAGTGTGACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQYSCSL*RSVTRA
Trigger: AGCCCTCGTCACACTGCGGCACAGGCTGCACGAGTA...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACAGTCCCATGCCCACTaGCCCCAGCACCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSQSHAH*PQHPHH
Trigger: GTGGTGGGGGTGCTGGGGGCAGTGGGCATGGGACTG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCCCGCACCAGTCCCATaGCCACTGCCCCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSPAPVP*PLPPAP
Trigger: GGGTGCTGGGGGCAGTGGGCATGGGACTGGTGCGGG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACCACCCCAGGGCCTCTaGCTTTGCTTCCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQPPQGL*LCFPKL
Trigger: GAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGCCAGACTCCCTCATTaGCAGCACCCTACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHARLPH*QHPTPA
Trigger: GGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCCACCACCTCTGACATaGACGCATTGGCTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHPPPLT*THWLGP
Trigger: AGGCCCTAGCCAATGCGTGCATGTCAGAGGTGGTGG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGTATATGGAGTCATTATaGACGGGGCCGAACCCTAGG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVYMESL*TGPNPR
Trigger: CCTAGGGTTCGGCCCCGTCCATAATGACTCCATATA...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTTATATGGAGTCATTATaGACGGGGCCGAACCCTAGG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAYMESL*TGPNPR
Trigger: CCTAGGGTTCGGCCCCGTCCATAATGACTCCATATA...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGGCACACACACCCGGTaGCTGGCACTGCCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSGTHTR*LALPVA
Trigger: AGCCACGGGCAGTGCCAGCCACCGGGTGTGTGTGCC...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACGGCACACACACCCGGTaGCTGGCACTGCCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHGTHTR*LALPVA
Trigger: AGCCACGGGCAGTGCCAGCCACCGGGTGTGTGTGCC...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACAGGCTCACAGCGGCATaGTCCCAGGGGCGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHRLTAA*SQGRGA
Trigger: TGCGCCTCGCCCCTGGGACCATGCCGCTGTGAGCCT...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGGGGCCCCGAGGAGCTaGAGGCAGGTGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSGAPRS*RQVVPG
Trigger: TCCTGGCACCACCTGCCTCCAGCTCCTCGGGGCCCC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTAGAACACTGGCTGTGTaGAAGGCTCGCTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPRTLAV*KARSLG
Trigger: CCCAAGGGAGCGAGCCTTCCACACAGCCAGTGTTCT...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGCTTGGCAGGCTCCTTaGCACCAACTGCATTCCGGG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHAWQAP*HQLHSG
Trigger: CCCGGAATGCAGTTGGTGCCAAGGAGCCTGCCAAGC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAGCTTGGCAGGCTCCTTaGCACCAACTGCATTCCGGG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQAWQAP*HQLHSG
Trigger: CCCGGAATGCAGTTGGTGCCAAGGAGCCTGCCAAGC...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCGGGGGACACTCCTCTaGACTCTTCAGGGCACCCCG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIRGTLL*TLQGTP
Trigger: CGGGGTGCCCTGAAGAGTCCAGAGGAGTGTCCCCCG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACTCTGCAGACACTCATaGCAGGTCAGGAAGCCATCG +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGLCRHS*QVRKPS
Trigger: CGATGGCTTCCTGACCTGCCATGAGTGTCTGCAGAG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCCCCATGTCCAGTCCTaGCACTCGTCGCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHPHVQS*HSSQKP
Trigger: TGGCTTCTGCGACGAGTGCCAGGACTGGACATGGGG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACCTGCAGCACCGTCCTaGGGCACGCATTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSPAAPS*GTHSWG
Trigger: CCCCCAGGAATGCGTGCCCCAGGACGGTGCTGCAGG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACACACACCCAGGCTCTaGTTACAAGTTCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGHTPRL*LQVPAP
Trigger: TGGGGCAGGAACTTGTAACCAGAGCCTGGGTGTGTG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCGCCATCCAGCTTGGTaGCGCAGTCGGGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSRHPAW*RSRGPR
Trigger: TCGGGGGCCCCGACTGCGCCACCAAGCTGGATGGCG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAGACCATAGAGACCTGTaGGGGGTGTCCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQDHRDL*GVSHSG
Trigger: CCCAGAGTGGGACACCCCCCACAGGTCTCTATGGTC...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTGACCATAGAGACCTGTaGGGGGTGTCCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSDHRDL*GVSHSG
Trigger: CCCAGAGTGGGACACCCCCCACAGGTCTCTATGGTC...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCGTGCAGGCCCCAGACTaGTTACAAGCTTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIVQAPD*LQASGE
Trigger: CTCACCTGAAGCTTGTAACCAGTCTGGGGCCTGCAC...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGTGCAGGCCCCAGACTaGTTACAAGCTTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIVQAPD*LQASGE
Trigger: CTCACCTGAAGCTTGTAACCAGTCTGGGGCCTGCAC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGTGCAGGCCCCAGACTaGTTACAAGCTTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPVQAPD*LQASGE
Trigger: CTCACCTGAAGCTTGTAACCAGTCTGGGGCCTGCAC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAACGTCCAGTCATAGGTaGGCTGCACGGAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILTSSHR*AARRGC
Trigger: GCATCCTCTCCGTGCAGCCCACCTATGACTGGACGT...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACACGTCCAGTCATAGGTaGGCTGCACGGAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHTSSHR*AARRGC
Trigger: GCATCCTCTCCGTGCAGCCCACCTATGACTGGACGT...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGATGATTCCACCGGCATaGGGGACACATTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLMIPPA*GTHSAE
Trigger: CTCTGCTGAATGTGTCCCCCATGCCGGTGGAATCAT...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAAAGTGGCAGCGGCAGTaGTCGGGCTCCACACATGAG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQKWQRQ*SGSTHE
Trigger: CTCATGTGTGGAGCCCGACCACTGCCGCTGCCACTT...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACCAGCGCATTCACTGTaGCGGTTGCAGCGGCATTCC +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQPAHSL*RLQRHS
Trigger: GGAATGCCGCTGCAACCGCCACAGTGAATGCGCTGG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCACAGTGGCTGCCCTTaGTGTGGTTGCGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSHSGCP*CGCGRA
Trigger: TGCTCTGCCGCAACCACACCAAGGGCAGCCACTGTG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCATTACACTGGCATTTaGTGCACTTCCCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAHYTGI*CTSRPG
Trigger: TCCTGGACGGGAAGTGCACCAAATGCCAGTGTAATG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGCGTGGCCATTACACTaGCATTTGGTGCACTTCCCG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPAWPLH*HLVHFP
Trigger: CGGGAAGTGCACCAAATGCCAGTGTAATGGCCACGC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTTGTGTTATTCTGACATaGACAGCCCGTCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPACVILT*TARPIL
Trigger: CAGGATGGGACGGGCTGTCCATGTCAGAATAACACA...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAAGTTGGTCTGGGACGTaGGGTCCAGGCAGCACTCCT +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQSWSGT*GPGSTP
Trigger: AGGAGTGCTGCCTGGACCCCACGTCCCAGACCAACT...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AAGAAGACGGAGAAGAAGACAAACAGGTCAATGTGGGCCTGGTCCTGCCGGAAGAGTTGGTCTGGGACGTaGGGTCCAGGCAGCACTCCT +
Preference number: 4 (lower is better)
Translates to: KKTEKKTNRSMWAWSCRKSWSGT*GPGSTP
Trigger: AGGAGTGCTGCCTGGACCCCACGTCCCAGACCAACT...CTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGTCTTCTTCTCCGTCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGAGGTGTCATAGGAGGTaGAGACATAGAGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSRCHRR*RHRGPR
Trigger: CCGTGGACCTCTATGTCTCCACCTCCTATGACACCT...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTGGGGCTGGGGGTGGCTaGATGTGTACAGTATGGACG +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSGAGGG*MCTVWT
Trigger: CGTCCATACTGTACACATCCAGCCACCCCCAGCCCC...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp AAGAAGACGGAGAAGAAGACAAACAGGTCAATGTGGGCCTGGTCCTGCCGGAAGGGCATGGTGCTCGTGTaGGTAGGTGATGACCAGCCG +
Preference number: 4 (lower is better)
Translates to: KKTEKKTNRSMWAWSCRKGMVLV*VGDDQP
Trigger: CGGCTGGTCATCACCTACCCACACGAGCACCATGCC...CTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGTCTTCTTCTCCGTCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTAGGTCAATGTGGGCCTaGTCCTGCCGGAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPRSMWA*SCRKKS
Trigger: GCTCTTCTTCCGGCAGGACCAGGCCCACATTGACCT...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTTGGCGAAGGGGCGGCTaGCCATCTTGGTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSWRRGG*PSWSSP
Trigger: AGGAGATGACCAAGATGGCCAGCCGCCCCTTCGCCA...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGGCGGGGATGGCTGGTaGGCAGCAGCCCCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSGGDGW*AAAPSH
Trigger: ATGGGAGGGGGCTGCTGCCCACCAGCCATCCCCGCC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGCAGCCCAGCAGTGGTaGCGGGGATGGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSAAQQW*RGWLVG
Trigger: GCCCACCAGCCATCCCCGCCACCACTGCTGGGCTGC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCTGGTGAGGTTGTCCTaGCTCAACAGTCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHLVRLS*LNSPFR
Trigger: CCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGTGACCCAGCTGCTGTaGATGAGAACCCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHVTQLL*MRTLGM
Trigger: CATGCCCAGGGTTCTCATCCACAGCAGCTGGGTCAC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAGTGACCCAGCTGCTGTaGATGAGAACCCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILVTQLL*MRTLGM
Trigger: CATGCCCAGGGTTCTCATCCACAGCAGCTGGGTCAC...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAGGGGAAGGGGGCCAGTaGTCTCCAAGTAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILGEGGQ*SPSRQC
Trigger: ACACTGTCTACTTGGAGACCACTGGCCCCCTTCCCC...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCATGCCCACCTGGGGTaGGATCTCAGGCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHHAHLG*DLRQRF
Trigger: AAACCTCTGCCTGAGATCCCACCCCAGGTGGGCATG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACTCCTCCTTGTCAGGCTaGGAGGTATTGGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHSSLSG*EVLGGC
Trigger: GCAGCCGCCCAATACCTCCCAGCCTGACAAGGAGGA...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334370.8
CDS-3UTR TCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACGTGCGGTTGCAGTGTaGGATGCCATCACCCTGGTA +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQRAVAV*DAITLV
Trigger: TACCAGGGTGATGGCATCTCACACTGCAACCGCACG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCCGCCGCTCACTCACTaGGTACCTGTACAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHPPLTH*VPVQVS
Trigger: GGAAACCTGTACAGGTACTCAGTGAGTGAGCGGCGG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCTCCTTCAGGTGAGGTaGGATTTCCTCCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFILLQVR*DFLQET
Trigger: GGTTTCCTGGAGGAAATCTCACCTCACCTGAAGGAG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTAGACCTCTCGCTGGTTaGTCCGACAGTCATTCTCAG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPRPLAG*SDSHSQ
Trigger: CTGAGAATGACTGTCGGATCAACCAGCGAGAGGTCT...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACCCGCCTCCGACAGCTaGACCCACAAACAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSPASDS*THKQRE
Trigger: CTCCCGCTGTTTGTGGGTTCAGCTGTCGGAGGCGGG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTCCTCTGGGTCCAGTaGGTACTTCTTTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILLLWVQ*VLLWLS
Trigger: GGAGAGCCAAAGAAGTACTCACTGGACCCAGAGGAG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGTGGGAAGCAGACGGTaGCCTTGGCGAAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSVGSRR*PWRRGG
Trigger: GCCGCCCCTTCGCCAAGGTCACCGTCTGCTTCCCAC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCATCGATAAATAGCTGCTaGATGCAGAACAAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASSINSC*MQNKGG
Trigger: GCCTCCTTTGTTCTGCATTCAGCAGCTATTTATCGA...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGGTGCTTCTCCCTCTCTaGAGCCATCTTACTTGTGTG +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLVLLPL*SHLTCV
Trigger: CACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCAC...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAGAACTCTTGACCTTGTaGTCAGCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILELLTL*SAHLGL
Trigger: GAGGCCAAGGTGGGCTGATCACAAGGTCAAGAGTTC...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGATCCCTAGTTGGACCTaGGTGAAGAGATGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVIPSWT*VKRCLK
Trigger: CTTCAGACATCTCTTCACTCAGGTCCAACTAGGGAT...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCAACAGGGCTGTGCACTaGCGGTACCGGCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFINRAVH*RYRHFH
Trigger: ATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTT...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACGATCCCATGAACAGTaGCCAGCATTACGGACTCAG +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGRSHEQ*PALRTQ
Trigger: CTGAGTCCGTAATGCTGGGCACTGTTCATGGGATCG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCGATCCCATGAACAGTaGCCAGCATTACGGACTCAG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIRSHEQ*PALRTQ
Trigger: CTGAGTCCGTAATGCTGGGCACTGTTCATGGGATCG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACGCAGCACCTGCCGCTaGCCCTTGCAGTCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTRSTCR*PLQSPA
Trigger: GGCGGGGGACTGCAAGGGGCAGCGGCAGGTGCTGCG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAAGCGTCGTCCACACATaGCGATCCACGTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILSVVHT*RSTWKS
Trigger: GCTTTTCCACGTGGATCGGCATGTGTGGACGACGCT...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTAGCGTCGTCCACACATaGCGATCCACGTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPSVVHT*RSTWKS
Trigger: GCTTTTCCACGTGGATCGGCATGTGTGGACGACGCT...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTGCCCTGGATCTCTACTaGATACTTGTGGTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSALDLY*ILVVPP
Trigger: GGGCGGGACCACAAGTATGCAGTAGAGATCCAGGGC...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAGCCCTGGATCTCTACTaGATACTTGTGGTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQALDLY*ILVVPP
Trigger: GGGCGGGACCACAAGTATGCAGTAGAGATCCAGGGC...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACGCCACAGCCCTGGTCTaGCAAGCAGCCCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHATALV*QAAQAG
Trigger: TCCTGCCTGGGCTGCTTGGCAGACCAGGGCTGTGGC...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGCGTGGCAGTCCCGATaGTCCTCGCAGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSAWQSR*SSQSGQ
Trigger: CTGCCCACTCTGCGAGGAGCATCGGGACTGCCACGC...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCCCCTTTGCGGCTGGTaGTCTGATGCCACTCACAGA +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHPLCGW*SDATHR
Trigger: TCTGTGAGTGGCATCAGAGCACCAGCCGCAAAGGGG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTTGGGGTTGTCCTCATTaGCACACCAGCCACACTCGT +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPWGCPH*HTSHTR
Trigger: ACGAGTGTGGCTGGTGTGGCAATGAGGACAACCCCA...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACAGTCCTCCAAGCACGTaGGGTTGCAGTGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHSPPST*GCSVRC
Trigger: GCATCTCACACTGCAACCGCACGTGCTTGGAGGACT...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCTGGCGTTGCCGAAGCTaGCGGGCCGGCATCGTTCGC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSWRCRS*RAGIVR
Trigger: GCGAACGATGCCGGCCCGGCAGCTTCGGCAACGCCA...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAGGTCCCCGTGCCCGTTaGACTGGCAGGGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTGPRAR*TGRAGS
Trigger: GCTGCCGGCCCTGCCAGTGCAACGGGCACGGGGACC...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACGGACGTAGCTCAGCGTaGAGGGGGTGCTGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHGRSSA*RGCCCR
Trigger: CCGACAGCAGCACCCCCTGCACGCTGAGCTACGTCC...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACCCCAGTGTGGGCATTaGAGTTCTCAGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILPQCGH*SSQDTE
Trigger: CTCTGTGTCCTGAGAACTGCAATGCCCACACTGGGG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACTGGTTACAAGTTCCTaGCCCAGTGTGGGCATTGCA +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGLVTSS*PSVGIA
Trigger: TGCAATGCCCACACTGGGGCAGGAACTTGTAACCAG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGGGCCAGGCACTCACTaGAGGTCCGGAGACGTCGAC +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSGPGTH*RSGDVD
Trigger: GTCGACGTCTCCGGACCTGCAGTGAGTGCCTGGCCC...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAAGGTGCAGGACCCATTaGGTCCAATGCAAGCACCTT +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGRCRTH*VQCKHL
Trigger: AAGGTGCTTGCATTGGACGCAATGGGTCCTGCACCT...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACTTGCCCTCCCGCGTaGACTGCTCGCAGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEITCPPA*TARSQQ
Trigger: CTGCTGACTGCGAGCAGTGCACGCGGGAGGGCAAGT...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGCGTCCACATGCACTTaGCCTCCCGCGTGCACTGCT +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIASTCT*PPACTA
Trigger: AGCAGTGCACGCGGGAGGGCAAGTGCATGTGGACGC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTGACACTGCTGCAGGCTaGTGCTCCAAACACAGTGCT +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPDTAAG*CSKHSA
Trigger: AGCACTGTGTTTGGAGCAGCAGCCTGCAGCAGTGTC...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCTACACTGGCATTTGGTaGACTTCCCGTCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIYTGIW*TSRPGG
Trigger: TCCTCCTGGACGGGAAGTGCACCAAATGCCAGTGTA...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCATGTGGGCCTGGTCCTaGCGGAAGAAGAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIMWAWS*RKKSRP
Trigger: GGGCCTGCTCTTCTTCCGGCAGGACCAGGCCCACAT...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTATCTTGGTCATCTCCTaGAAGTGCCGGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSILVIS*KCRRCS
Trigger: GGAGCAGCGCCGGCACTTGCAGGAGATGACCAAGAT...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCTGTCAGCAGCAGGGGTaGCAGGAAGGGCTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEICQQQG*QEGLRA
Trigger: CGCTCTGAGCCCTTCCTGGCACCCCTGCTGCTGACA...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAGCAGGCGCCGTTGGGTaGATGGGGCCCGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTAGAVG*MGPARQ
Trigger: CTGCCTGGCGGGCCCCATGCACCCAACGGCGCCTGC...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACTGGAGGCCTCACAGTaGTTCTCCCTCTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQLEASQ*FSLSEA
Trigger: GGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ACGGCCCCGAAGGTCACGTCCAGCGTCAGGCGGATGTCCACGTTGGTGAATTTGTCTAGCTTCTTTGAATaGCCAGCTGACTTCACCCCA +
Preference number: 4 (lower is better)
Translates to: TAPKVTSSVRRMSTLVNLSSFFE*PADFTP
Trigger: TGGGGTGAAGTCAGCTGGGCATTCAAAGAAGCTAGA...CAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTCGGGGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR GCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCAGGGCCTCTGCCTTTaGTTCCCAAAGCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSQGLCL*FPKLFP
Trigger: CGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACAGGGCCTCTGCCTTTaGTTCCCAAAGCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQQGLCL*FPKLFP
Trigger: CGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACCACCACCTCTGACATaGACGCATTGGCTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQPPPLT*THWLGP
Trigger: AGGCCCTAGCCAATGCGTGCATGTCAGAGGTGGTGG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCCAAAACCAGTGCCATaGCCAGAACCTTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHPKPVP*PEPCPG
Trigger: CCCTGGGCAAGGTTCTGGCCATGGCACTGGTTTTGG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCAAAACCAGTGCCATaGCCAGAACCTTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSPKPVP*PEPCPG
Trigger: CCCTGGGCAAGGTTCTGGCCATGGCACTGGTTTTGG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTAAGACTCCCAGGTGTTaGCGGAGAAGTTGTATAGGA +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSKTPRC*RRSCIG
Trigger: TCCTATACAACTTCTCCGCCAACACCTGGGAGTCTT...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACGTGGCCCCTGCCCAGTaGACTGAAGGCCCACACGTC +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHVAPAQ*TEGPHV
Trigger: GACGTGTGGGCCTTCAGTCCACTGGGCAGGGGCCAC...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGGCCGGTGTCCACCATaGACCAGCAGGGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSGRCPP*TSRARE
Trigger: CTCCCGTGCCCTGCTGGTCCATGGTGGACACCGGCC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCACGTGGAAAAGCTCAGTaGAGTTCACTCGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPRGKAQ*SSLAQR
Trigger: TCTCTGTGCGAGTGAACTCCACTGAGCTTTTCCACG...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCGGGAGCAGACGCTGTaGTCTGTGTACATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSREQTL*SVYMEQ
Trigger: CTGCTCCATGTACACAGACCACAGCGTCTGCTCCCG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCGGGAGCAGACGCTGTaGTCTGTGTACATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHREQTL*SVYMEQ
Trigger: CTGCTCCATGTACACAGACCACAGCGTCTGCTCCCG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACCAGGCAGGAAGCTCTaGGTGACGCAGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSPGRKL*VTQASR
Trigger: CCTGGAGGCCTGCGTCACCCAGAGCTTCCTGCCTGG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCACCATTGAGCTGGCCCTaGATCTCTACTGCATACTTG +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPPLSWP*ISTAYL
Trigger: CAAGTATGCAGTAGAGATCCAGGGCCAGCTCAATGG...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTGCCGAGCCATTGAGCTaGCCCTGGATCTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSAEPLS*PWISTA
Trigger: TGCAGTAGAGATCCAGGGCCAGCTCAATGGCTCGGC...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAAGGATGAGGAGCCATTaGCCTCCCAGTGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQRMRSH*PPSAAR
Trigger: TCGTGCTGCACTGGGAGGCCAATGGCTCCTCATCCT...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACGGTGCAGGAAGCGGCTaGCAGTGTCGGCTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHGAGSG*QCRLRG
Trigger: GCCTCTCAGCCGACACTGCCAGCCGCTTCCTGCACC...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCAAACATCCACAAGGTaGCATCGGGTCCATCCACCA +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIQTSTR*HRVHPP
Trigger: TGGTGGATGGACCCGATGCCACCTTGTGGATGTTTG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCATGATTCCACCGGCATaGGGGACACATTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIMIPPA*GTHSAE
Trigger: CTCTGCTGAATGTGTCCCCCATGCCGGTGGAATCAT...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAGGCAGGAGGTACAGTTaGGTAGGAGGTGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQGRRYS*VGGDKG
Trigger: CCCCTTGTCACCTCCTACCCAACTGTACCTCCTGCC...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCGGCAGAGCAAGCAGTaGTCACGCGCCCCAACACCA +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIRQSKQ*SRAPTP
Trigger: TGGTGTTGGGGCGCGTGACCACTGCTTGCTCTGCCG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCGGCGTTTGGGCTCATaGAAGCAGTTGGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSRRLGS*KQLVWD
Trigger: GTCCCAGACCAACTGCTTCCATGAGCCCAAACGCCG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCAGGTGTCATAGGAGGTaGAGACATAGAGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIRCHRR*RHRGPR
Trigger: CCGTGGACCTCTATGTCTCCACCTCCTATGACACCT...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAACCATCTGCAGGGGGTaGTGGAGGTGGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSTICRG*WRWWGW
Trigger: CCAGCCCCACCACCTCCACCACCCCCTGCAGATGGT...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCAGTCGGCTGAGCCGTTaGCGCCGGGCCCACTTGGGT +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSSRLSR*RRAHLG
Trigger: ACCCAAGTGGGCCCGGCGCCAACGGCTCAGCCGACT...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACAGGTCAATGTGGGCCTaGTCCTGCCGGAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHRSMWA*SCRKKS
Trigger: GCTCTTCTTCCGGCAGGACCAGGCCCACATTGACCT...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAACAAACAGGTCAATGTaGGCCTGGTCCTGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILTNRSM*AWSCRK
Trigger: CTTCCGGCAGGACCAGGCCCACATTGACCTGTTTGT...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAGCGCCGTTGGGTGCATaGGGCCCGCCAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTAPLGA*GPPGSW
Trigger: CCAGCTGCCTGGCGGGCCCCATGCACCCAACGGCGC...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGTGATCAGCCCACCTTaGCCTCTCAAAGTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPVISPP*PLKVLG
Trigger: TCCTAGCACTTTGAGAGGCCAAGGTGGGCTGATCAC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTGTGATCAGCCCACCTTaGCCTCTCAAAGTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLVISPP*PLKVLG
Trigger: TCCTAGCACTTTGAGAGGCCAAGGTGGGCTGATCAC...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACATGCCCACCTGGGGTaGGATCTCAGGCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQHAHLG*DLRQRF
Trigger: AAACCTCTGCCTGAGATCCCACCCCAGGTGGGCATG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCCAGCCCACAGTGCCTaGGATCTGCTCCCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSPAHSA*DLLPSA
Trigger: TGCCGAGGGGAGCAGATCTCAGGCACTGTGGGCTGG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGTGACACTCGTAGCTaGGGGGCGTGTTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEISDTRS*GACSGR
Trigger: CCTGCCTGAACACGCCCCTCAGCTACGAGTGTCACT...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGCCCAGACCCCGAGATaGGCCACGCACATTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIAQTPR*ATHIPH
Trigger: ATGAGGAATGTGCGTGGCTCATCTCGGGGTCTGGGC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGCAGAACGTCGCTGCTaGACTCGTCAGGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSAERRC*TRQGPS
Trigger: GCTCGGACCCTGACGAGTTCAGCAGCGACGTTCTGC...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCTCCTCTGGGTCCAGTaGGTACTTCTTTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHLLWVQ*VLLWLS
Trigger: GGAGAGCCAAAGAAGTACTCACTGGACCCAGAGGAG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCTCCTCTGGGTCCAGTaGGTACTTCTTTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSLLWVQ*VLLWLS
Trigger: GGAGAGCCAAAGAAGTACTCACTGGACCCAGAGGAG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCGGACTCCCGTGAAATaGTTCCCGGCACTTGGCGCA +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIRTPVK*FPALGA
Trigger: TGCGCCAAGTGCCGGGAATCATTTCACGGGAGTCCG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACAGAGGGACATGCTGGTaGGGTTGTCCTGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHRGTCW*GCPGST
Trigger: TGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCT...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTTGTGTGCATGTGCACTaGTTGTCTCCCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPCVHVH*LSPFTR
Trigger: TCTGGTGAAGGGAGACAATCAGTGCACATGCACACA...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCGTGCTTCTCCCTCTCTaGAGCCATCTTACTTGTGTG +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIVLLPL*SHLTCV
Trigger: CACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCAC...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGAACTCTTGACCTTGTaGTCAGCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHELLTL*SAHLGL
Trigger: GAGGCCAAGGTGGGCTGATCACAAGGTCAAGAGTTC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTTCTCCTCCCTCACCCTaGCATCCACACCATCATTTA +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPSPPSP*HPHHHL
Trigger: TAAATGATGGTGTGGATGTCAGGGTGAGGGAGGAGA...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCATCAAGAACCAGACTCTaGTCTTCCTCACAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPSRTRL*SSSQAS
Trigger: TGAGGCTTGTGAGGAAGATCAGAGTCTGGTTCTTGA...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGTCAAGAACCAGACTCTaGTCTTCCTCACAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLSRTRL*SSSQAS
Trigger: TGAGGCTTGTGAGGAAGATCAGAGTCTGGTTCTTGA...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAATTACGGACTCAGGCTaGTGCAGGCCAAACGGACCT +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQITDSG*CRPNGP
Trigger: AGGTCCGTTTGGCCTGCAGCAGCCTGAGTCCGTAAT...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACGCAGGTGCCGTGGCTaGCACAGTAGGCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSRRCRG*HSRLST
Trigger: AGTGCTCAGCCTACTGTGGCAGCCACGGCACCTGCG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAGGGGCGAGGCGCAGGTaGCGTGGCTGCCACAGTAGG +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTGARRR*RGCHSR
Trigger: CCTACTGTGGCAGCCACGGCACCTGCGCCTCGCCCC...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAAGCGTCGTCCACACATaGCGATCCACGTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQSVVHT*RSTWKS
Trigger: GCTTTTCCACGTGGATCGGCATGTGTGGACGACGCT...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGAGACCACCATGTAATTaGCCAGAACACTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVRPPCN*PEHWLC
Trigger: ACACAGCCAGTGTTCTGGGCAATTACATGGTGGTCT...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGGCAGCTCTCATTGTaGACGCACCAGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIRQLSL*THQPRV
Trigger: CACCCTGGGCTGGTGCGTGCACAATGAGAGCTGCCT...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACAGAGTTAGCTCGCTGTaGCCAGGGCCTGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHRVSSL*PGPAEP
Trigger: TGGCTCGGCAGGCCCTGGGCACAGCGAGCTAACTCT...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCCAGTGTGGGCATTaGAGTTCTCAGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSPQCGH*SSQDTE
Trigger: CTCTGTGTCCTGAGAACTGCAATGCCCACACTGGGG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCTGGTTACAAGTTCCTaGCCCAGTGTGGGCATTGCA +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHLVTSS*PSVGIA
Trigger: TGCAATGCCCACACTGGGGCAGGAACTTGTAACCAG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAAGGTGCAGGACCCATTaGGTCCAATGCAAGCACCTT +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILRCRTH*VQCKHL
Trigger: AAGGTGCTTGCATTGGACGCAATGGGTCCTGCACCT...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCAAGGCGCACTGAGTTaGCTGAGCACAGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIQGALS*LSTAQG
Trigger: TCCCTGGGCTGTGCTCAGGCAACTCAGTGCGCCTTG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAATGGTCGTGGCAATTCTaGGTCTCGTTGCAGTCGTGG +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQWSWQF*VSLQSW
Trigger: CCACGACTGCAACGAGACGCAGAATTGCCACGACCA...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTTGGTCGTGGCAATTCTaGGTCTCGTTGCAGTCGTGG +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSWSWQF*VSLQSW
Trigger: CCACGACTGCAACGAGACGCAGAATTGCCACGACCA...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACATTCCGTGGAGCAGTTaGGGCCCACAAAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHIPWSS*GPQSQS
Trigger: ACTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAAT...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGACTCCTTCCTGGAGATaGAGATGTGGCTATTTCCAC +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSTPSWR*RCGYFH
Trigger: GTGGAAATAGCCACATCTGCATCTCCAGGAAGGAGT...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAACTCCTTCCTGGAGATaGAGATGTGGCTATTTCCAC +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPTPSWR*RCGYFH
Trigger: GTGGAAATAGCCACATCTGCATCTCCAGGAAGGAGT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTATACACTGGCATTTGGTaGACTTCCCGTCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILYTGIW*TSRPGG
Trigger: TCCTCCTGGACGGGAAGTGCACCAAATGCCAGTGTA...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACAGCTGCCCTGGCATGTaGCCGTCTCTGTGTTATTCT +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHSCPGM*PSLCYS
Trigger: AGAATAACACAGAGACGGGCACATGCCAGGGCAGCT...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGGTCACTGGGGGAGCTaGCCTGGCATGTGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSGHWGS*PGMCPS
Trigger: AGACGGGCACATGCCAGGGCAGCTCCCCCAGTGACC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACCCGCACCAGTCCCATaGCCACTGCCCCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTPAPVP*PLPPAP
Trigger: GGGTGCTGGGGGCAGTGGGCATGGGACTGGTGCGGG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACTGTCTCTTTCCAGCTaGTTCCCTCGCCAGCGCTAT +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQLSLSS*FPRQRY
Trigger: ATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCACGCGAAGGGAAGATaGAAAGTCCAGTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHHAKGR*KVQSLQ
Trigger: CTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACTCAGGGGTTCGGGCCTaGACCCCACAGACCCAATCC +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHSGVRA*TPQTQS
Trigger: GGATTGGGTCTGTGGGGTCCAGGCCCGAACCCCTGA...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGTGGCCCCTGCCCAGTaGACTGAAGGCCCACACGTC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSVAPAQ*TEGPHV
Trigger: GACGTGTGGGCCTTCAGTCCACTGGGCAGGGGCCAC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCACATGCCGATCCACGTaGAAAAGCTCAGTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFITCRST*KSSVEF
Trigger: GAACTCCACTGAGCTTTTCCACGTGGATCGGCATGT...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACCGCCCTGGCGCAGGTaGCAGGTGGCACTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTPPWRR*QVALVR
Trigger: CCTGACCAGTGCCACCTGCCACCTGCGCCAGGGCGG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCATCACAGAAGGGGTCCTaGGTGCAGGCGTGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSSQKGS*VQAWQS
Trigger: GGACTGCCACGCCTGCACCCAGGACCCCTTCTGTGA...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACTCACAGGTCAGTCGCTaGCTGCAGAGCGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHSQVSR*LQSGGH
Trigger: GTGTCCCCCGCTCTGCAGCCAGCGACTGACCTGTGA...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGAAGGTGAGGGTGAGTaGGGGACAGAGGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSEGEGE*GTEGPG
Trigger: CCCGGGACCCTCTGTCCCCCACTCACCCTCACCTTC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAAGTGTCCAGGAAGCGTaGGAATCCATCAAACGCCAG +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILSVQEA*ESIKRQ
Trigger: CTGGCGTTTGATGGATTCCCACGCTTCCTGGACACT...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGGCCTGTCCCGTCGCTaGCCGCAGAAGGCAGCTATG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSGLSRR*PQKAAM
Trigger: CATAGCTGCCTTCTGCGGCCAGCGACGGGACAGGCC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTGTTCCTGCCCCAGTGTaGGCATTGCAGTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSVPAPV*ALQFSG
Trigger: TCCTGAGAACTGCAATGCCCACACTGGGGCAGGAAC...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACCCATCCACCATGGTGTaGCCCAGGCGGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHPSTMV*PRRCRK
Trigger: CTTCCTGCACCGCCTGGGCCACACCATGGTGGATGG...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACAAACATCCACAAGGTaGCATCGGGTCCATCCACCA +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILQTSTR*HRVHPP
Trigger: TGGTGGATGGACCCGATGCCACCTTGTGGATGTTTG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACATATGCGGCTGCATaGAAGGAGCGGGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEITYAAA*KERGDG
Trigger: CCCATCGCCCCGCTCCTTCCATGCAGCCGCATATGT...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGTGACCAGCAACGGCTaGCAGCTCCACGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSVTSNG*QLHGLG
Trigger: CCCCAGACCGTGGAGCTGCCAGCCGTTGCTGGTCAC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCACATTCAGCAGAGAGTaGCTGAAGCACGTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFITFSRE*LKHVQS
Trigger: TGACTGGACGTGCTTCAGCCACTCTCTGCTGAATGT...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCCGTGGGGCTGGTCGTaGCAATTCTGCGTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIPWGWS*QFCVSL
Trigger: CAACGAGACGCAGAATTGCCACGACCAGCCCCACGG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACTGTCATGTTGTCCATaGTATAGCCGGTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGLSCCP*YSRSCS
Trigger: GCTGCAAGACCGGCTATACCATGGACAACATGACAG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACCCCACAAAGCCAAAGTaGCAGCGGCAGTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHPTKPK*QRQWSG
Trigger: GCCCGACCACTGCCGCTGCCACTTTGGCTTTGTGGG...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCACAGTGGCTGCCCTTaGTGTGGTTGCGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIHSGCP*CGCGRA
Trigger: TGCTCTGCCGCAACCACACCAAGGGCAGCCACTGTG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGCTGGAGATGCAGATGTaGCTATTTCCACGACAAAAG +
Preference number: 4 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVLEMQM*LFPRQK
Trigger: CTTTTGTCGTGGAAATAGCCACATCTGCATCTCCAG...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTTCTTTGGCTCTCCCTTaGACATTTGTAACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SEPDSLIASTLLQPTIPASLALP*TFVTPS
Trigger: GGAAGGAGTTACAAATGTCCAAGGGAGAGCCAAAGA...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGTTACATGTGTCCGCGTaGCCATTACACTGGCATTTG +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLLHVSA*PLHWHL
Trigger: CAAATGCCAGTGTAATGGCCACGCGGACACATGTAA...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGATGTGTTATTCTGACATaGACAGCCCGTCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGCVILT*TARPIL
Trigger: CAGGATGGGACGGGCTGTCCATGTCAGAATAACACA...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACAGTCTCGACGGTCACTaGGGGAGCTGCCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHSLDGH*GSCPGM
Trigger: CATGCCAGGGCAGCTCCCCCAGTGACCGTCGAGACT...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTTGGATGTGTACAGTATaGACGCCAGTGTCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSWMCTV*TPVSGA
Trigger: GGCCCCTGACACTGGCGTCCATACTGTACACATCCA...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACATACCCGTGGCTCTGCTaGGGCGCCCGGCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTYPWLC*GARPTA
Trigger: AGCAGTGGGCCGGGCGCCCCAGCAGAGCCACGGGTA...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACAAAGGAGGCCCCATCTaGGCAACCCTGGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHKGGPI*ATLGEG
Trigger: CCCTTCCCCCAGGGTTGCCCAGATGGGGCCTCCTTT...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGTGATCAGCCCACCTTaGCCTCTCAAAGTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHVISPP*PLKVLG
Trigger: TCCTAGCACTTTGAGAGGCCAAGGTGGGCTGATCAC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCCATATTGGCCAGGCTaGTCACGAACTCTTGACCTT +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIPYWPG*SRTLDL
Trigger: AAGGTCAAGAGTTCGTGACCAGCCTGGCCAATATGG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTTCTATAGGCATAACATaGCCTTGTAGATCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSSIGIT*PCRSKR
Trigger: CCTCTTCGATCTACAAGGTCATGTTATGCCTATAGA...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACGCCGCCTCCTGCACTaGCCCTTAGAGCGGGGACAG +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTRRLLH*PLERGQ
Trigger: CTGTCCCCGCTCTAAGGGTCAGTGCAGGAGGCGGCG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTATGTAGTTGGCATCACTaGAGAGGTGCAGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILCSWHH*RGAAAS
Trigger: AGATGCTGCTGCACCTCTTCAGTGATGCCAACTACA...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGGCAAGCTCAGCTCCTaGCACCCATTGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSGKLSS*HPLMAA
Trigger: GGCTGCCATCAATGGGTGTCAGGAGCTGAGCTTGCC...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACCACCGCAGCTACATGTaGGTACCGACCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHHRSYM*VPTTGR
Trigger: CCTCCCAGTGGTCGGTACTCACATGTAGCTGCGGTG...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACGCTGGGTGTTAGGGTaGTGGTCGTGCTGCGGACAA +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSRWVLG*WSCCGQ
Trigger: TTGTCCGCAGCACGACCATCACCCTAACACCCAGCG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR TCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACAGTGACACTCGTAGCTaGGGGGCGTGTTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHSDTRS*GACSGR
Trigger: CCTGCCTGAACACGCCCCTCAGCTACGAGTGTCACT...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACGGGGCTCCTTCAGGTaGGGTGAGATTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSRGSFR*GEISSR
Trigger: CCTGGAGGAAATCTCACCTCACCTGAAGGAGCCCCG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACAGACCTCTCGCTGGTTaGTCCGACAGTCATTCTCAG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHRPLAG*SDSHSQ
Trigger: CTGAGAATGACTGTCGGATCAACCAGCGAGAGGTCT...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCATCGATAAATAGCTGCTaGATGCAGAACAAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPSINSC*MQNKGG
Trigger: GCCTCCTTTGTTCTGCATTCAGCAGCTATTTATCGA...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGTCGATAAATAGCTGCTaGATGCAGAACAAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLSINSC*MQNKGG
Trigger: GCCTCCTTTGTTCTGCATTCAGCAGCTATTTATCGA...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGATCAAGAACCAGACTCTaGTCTTCCTCACAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGSRTRL*SSSQAS
Trigger: TGAGGCTTGTGAGGAAGATCAGAGTCTGGTTCTTGA...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTAACAGGGCTGTGCACTaGCGGTACCGGCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSNRAVH*RYRHFH
Trigger: ATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTT...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGTGAGGCCCTGCAAATaGGACCTCTATAGGCATAAC +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHVRPCK*DLYRHN
Trigger: GTTATGCCTATAGAGGTCGCATTTGCAGGGCCTCAC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGACAGGTAGTCATACGTaGACTCTGTGTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSTGSHT*TLCPGK
Trigger: TTTTCCTGGACACAGAGTGCACGTATGACTACCTGT...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCAGACCACCATGTAATTaGCCAGAACACTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIRPPCN*PEHWLC
Trigger: ACACAGCCAGTGTTCTGGGCAATTACATGGTGGTCT...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCAGAGTTAGCTCGCTGTaGCCAGGGCCTGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSRVSSL*PGPAEP
Trigger: TGGCTCGGCAGGCCCTGGGCACAGCGAGCTAACTCT...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGAAGGAGATCTCGCTaGCTCCTGGCACACCAGTCC +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIRRRSR*LLAHQS
Trigger: GGACTGGTGTGCCAGGAGGCAGCGAGATCTCCTTCT...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCCCCTTTGCGGCTGGTaGTCTGATGCCACTCACAGA +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIPLCGW*SDATHR
Trigger: TCTGTGAGTGGCATCAGAGCACCAGCCGCAAAGGGG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACAGCCCTCGGCACAGATaGACACACCCAGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHSPRHR*THPGSG
Trigger: ACCAGAGCCTGGGTGTGTGCATCTGTGCCGAGGGCT...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGTCTCCCAGACCAGCTaGCCGCCATCCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSVSQTS*PPSSLV
Trigger: CACCAAGCTGGATGGCGGGCAGCTGGTCTGGGAGAC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAGTGTGGCCCAGGCGGTaGAGGAAGCGGCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTVWPRR*RKRLAV
Trigger: CACTGCCAGCCGCTTCCTGCACCGCCTGGGCCACAC...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCATACGATCTCGCTTTaGCCCCTGAGAAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIHTISL*PLRRGQ
Trigger: CTGGCCCCTTCTCAGGGGGCAAAGCGAGATCGTATG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACAGTCATTCTCAGAGGTaGAGGACCCATTGCGTCCAA +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHSHSQR*RTHCVQ
Trigger: TTGGACGCAATGGGTCCTGCACCTCTGAGAATGACT...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACTCGGAGCAGTTCCCTaGCCAGAAGACCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSLGAVP*PEDLSL
Trigger: CAGCGAGAGGTCTTCTGGGCAGGGAACTGCTCCGAG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAGCTGCACGGAGAGGATaGGGCGGGTCTCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTAARRG*GGSPLS
Trigger: GGACAGGGGAGACCCGCCGCATCCTCTCCGTGCAGC...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAAGCCGGTCTTGCAGCTaGACTCATAGCCGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSSRSCS*THSRGA
Trigger: AGCCCCACGGCTATGAGTGCAGCTGCAAGACCGGCT...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACATTCCGTGGAGCAGTTaGGGCCCACAAAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHIPWSS*GPQSQS
Trigger: ACTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAAT...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCATGTGGGCCTGGTCCTaGCGGAAGAAGAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSMWAWS*RKKSRP
Trigger: GGGCCTGCTCTTCTTCCGGCAGGACCAGGCCCACAT...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACTGGCCACGCCAGCCATaGCATCTTCTGTGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHWPRQP*HLLWAR
Trigger: TCGAGCCCACAGAAGATGGCATGGCTGGCGTGGCCA...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCATACTCGTGCAGCCTGTaGCGCAGTGTGACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSYSCSL*RSVTRA
Trigger: AGCCCTCGTCACACTGCGGCACAGGCTGCACGAGTA...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCCCCCACAGTACTCGTaGAGCCTGTGCCGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSPPQYS*SLCRSV
Trigger: CACACTGCGGCACAGGCTGCACGAGTACTGTGGGGG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACATCTTACTTGTGTGTaGACATGTGCATGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASHLTCV*TCACVH
Trigger: ATGAACACATGCACATGTGCACACACAAGTAAGATG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTTCTAGCTTCTTTGAATaGCCAGCTGACTTCACCCCA +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPSSFFE*PADFTP
Trigger: TGGGGTGAAGTCAGCTGGGCATTCAAAGAAGCTAGA...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACTATATGGAGTCATTATaGACGGGGCCGAACCCTAGG +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHYMESL*TGPNPR
Trigger: CCTAGGGTTCGGCCCCGTCCATAATGACTCCATATA...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCTGAGGAAGCTTCGATaGGCGGAGGTCGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSLRKLR*AEVGCS
Trigger: GGAGCACCCGACCTCCGCCCATCGAAGCTTCCTCAG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACATGCCAGCAGCCCTGGTaGGGACAGGAAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTCQQPW*GQEGAS
Trigger: GCTGGCGCCTTCCTGTCCCCACCAGGGCTGCTGGCA...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACCCCAATAGCCCCCGCTaGTGCTGTCAAGGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHPNSPR*CCQGGN
Trigger: GTTTCCGCCTTGACAGCACCAGCGGGGGCTATTGGG...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCAGAGAACCGGGCAGTaGAGGGCCGGTGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSQRTGQ*RAGVHH
Trigger: ATGGTGGACACCGGCCCTCCACTGCCCGGTTCTCTG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAACATGCCGATCCACGTaGAAAAGCTCAGTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILTCRST*KSSVEF
Trigger: GAACTCCACTGAGCTTTTCCACGTGGATCGGCATGT...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTAATTGCCCAGAACACTaGCTGTGTGGAAGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSNCPEH*LCGRLA
Trigger: AGCGAGCCTTCCACACAGCCAGTGTTCTGGGCAATT...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAAATTGCCCAGAACACTaGCTGTGTGGAAGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQNCPEH*LCGRLA
Trigger: AGCGAGCCTTCCACACAGCCAGTGTTCTGGGCAATT...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAAAGGCCAGGCAGGCCTaGCAGTCACCCAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTKARQA*QSPRRR
Trigger: CCGCCTCCTGGGTGACTGCCAGGCCTGCCTGGCCTT...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGAGACCTTGTCAGGCTaGGAGGTATTGGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSETLSG*EVLGGC
Trigger: GCAGCCGCCCAATACCTCCCAGCCTGACAAGGTCTC...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCCATTGAGCTGGCCCTaGATCTCTACTGCATACTTG +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPPLSWP*ISTAYL
Trigger: CAAGTATGCAGTAGAGATCCAGGGCCAGCTCAATGG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACCGTCCCCTTTGCGGCTaGTGCTCTGATGCCACTCAC +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHRPLCG*CSDATH
Trigger: GTGAGTGGCATCAGAGCACCAGCCGCAAAGGGGACG...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGCAGCTCCGGCACCGTaGCTCCGAGTGTACACTGTC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSAAPAP*LRVYTV
Trigger: GACAGTGTACACTCGGAGCCACGGTGCCGGAGCTGC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGGCACCGTCCCAGTGTaGGGTTGTCCTCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSGTVPV*GCPHCH
Trigger: GTGGCAATGAGGACAACCCCACACTGGGACGGTGCC...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCATTGCGGCAGTGGCTGTaGAAGCTGCAGCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSLRQWL*KLQPQS
Trigger: GGACTGTGGCTGCAGCTTCCACAGCCACTGCCGCAA...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACTGAGGTTGTCGCAGTaGCCACGGCGTGGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTLRLSQ*PRRGSP
Trigger: CGGGGACCCACGCCGTGGCCACTGCGACAACCTCAG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGGATGAGGAGCCATTaGCCTCCCAGTGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIRMRSH*PPSAAR
Trigger: TCGTGCTGCACTGGGAGGCCAATGGCTCCTCATCCT...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACTACTCCAGCAGCTGCTaGTTGAAGCCATTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHYSSSC*LKPFSG
Trigger: CCCGGAAAATGGCTTCAACCAGCAGCTGCTGGAGTA...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACGTAGAGGGAGTCGGTaGCCTCGTGGTAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSRRGSR*PRGRQQ
Trigger: CTGCTGTCTACCACGAGGCCACCGACTCCCTCTACG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCCCCAAGAACCACCATaGTGTCCCCTAACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIPQEPP*CPLTGL
Trigger: CAGCCCTGTTAGGGGACACCATGGTGGTTCTTGGGG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTACATTCAGCAGAGAGTaGCTGAAGCACGTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPTFSRE*LKHVQS
Trigger: TGACTGGACGTGCTTCAGCCACTCTCTGCTGAATGT...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCTGTCATGTTGTCCATaGTATAGCCGGTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPLSCCP*YSRSCS
Trigger: GCTGCAAGACCGGCTATACCATGGACAACATGACAG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCCCACAAAGCCAAAGTaGCAGCGGCAGTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSPTKPK*QRQWSG
Trigger: GCCCGACCACTGCCGCTGCCACTTTGGCTTTGTGGG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACTGCAGCGGCATTCCGTaGAGCAGTTGCGGCCCACAA +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHCSGIP*SSCGPQ
Trigger: TTGTGGGCCGCAACTGCTCCACGGAATGCCGCTGCA...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCTGGAGATGCAGATGTaGCTATTTCCACGACAAAAG +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSLEMQM*LFPRQK
Trigger: CTTTTGTCGTGGAAATAGCCACATCTGCATCTCCAG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGCTGGAGATGCAGATGTaGCTATTTCCACGACAAAAG +
Preference number: 4 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLLEMQM*LFPRQK
Trigger: CTTTTGTCGTGGAAATAGCCACATCTGCATCTCCAG...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ACGGCCCCGAAGGTCACGTCCAGCGTCAGGCGGATGTCCACGTTGGTGAATTTGTTTGTAACTCCTTCCTaGAGATGCAGATGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: TAPKVTSSVRRMSTLVNLFVTPS*RCRCGY
Trigger: ATAGCCACATCTGCATCTCCAGGAAGGAGTTACAAA...CAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTCGGGGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCATTACACTGGCATTTaGTGCACTTCCCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHHYTGI*CTSRPG
Trigger: TCCTGGACGGGAAGTGCACCAAATGCCAGTGTAATG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CCA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCTTACATGTGTCCGCGTaGCCATTACACTGGCATTTG +
Preference number: 4 (lower is better)
Translates to: LRVPSVSFQLLPSPALSILHVSA*PLHWHL
Trigger: CAAATGCCAGTGTAATGGCCACGCGGACACATGTAA...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACTGGAAGCAGTTGGTCTaGGACGTGGGGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHWKQLV*DVGSRQ
Trigger: CTGCCTGGACCCCACGTCCCAGACCAACTGCTTCCA...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACAGGTGTCATAGGAGGTaGAGACATAGAGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHRCHRR*RHRGPR
Trigger: CCGTGGACCTCTATGTCTCCACCTCCTATGACACCT...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGGGGTTTCACCATATTaGCCAGGCTGGTCACGAACT +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHGVSPY*PGWSRT
Trigger: AGTTCGTGACCAGCCTGGCCAATATGGTGAAACCCC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCATGCCCACCTGGGGTaGGATCTCAGGCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIHAHLG*DLRQRF
Trigger: AAACCTCTGCCTGAGATCCCACCCCAGGTGGGCATG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACAGGGAGAAGCGGAATaGGGCGTTAAAGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSQGEAE*GVKAQQ
Trigger: CTGCTGGGCTTTAACGCCTCATTCCGCTTCTCCCTG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACCCACACGTCGTTGGTaGGCGAGCCGTCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTPTRRW*ASRQPA
Trigger: AGCTGGCTGACGGCTCGCTCACCAACGACGTGTGGG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACCAGCCCACAGTGCCTaGGATCTGCTCCCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTPAHSA*DLLPSA
Trigger: TGCCGAGGGGAGCAGATCTCAGGCACTGTGGGCTGG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACGTATTGGGCGGCTGCTaGAAGGTGAGCAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHVLGGC*KVSKCR
Trigger: CCTGCACTTGCTCACCTTTCAGCAGCCGCCCAATAC...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGTATTGGGCGGCTGCTaGAAGGTGAGCAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSVLGGC*KVSKCR
Trigger: CCTGCACTTGCTCACCTTTCAGCAGCCGCCCAATAC...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGCAGCATTGGGTAGATaGAGCCACGGTAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSAALGR*SHGRPG
Trigger: CCCTGGTCTACCGTGGCTTCATCTACCCAATGCTGC...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR TCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCAGCCCACCGAAGCATTaGAGCCCCAGGATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSSPPKH*SPRMRS
Trigger: GCTCCTCATCCTGGGGCTTCAATGCTTCGGTGGGCT...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCTCCTCTGGGTCCAGTaGGTACTTCTTTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEILLWVQ*VLLWLS
Trigger: GGAGAGCCAAAGAAGTACTCACTGGACCCAGAGGAG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACCTGCTCCACCGAGATaGGGCGGTAGCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTPAPPR*GGSTAG
Trigger: GCCAGCAGTGCTACCGCCTCATCTCGGTGGAGCAGG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTTCGATAAATAGCTGCTaGATGCAGAACAAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLSINSC*MQNKGG
Trigger: GCCTCCTTTGTTCTGCATTCAGCAGCTATTTATCGA...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR TCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTTGTGTGCATGTGCACTaGTTGTCTCCCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSCVHVH*LSPFTR
Trigger: TCTGGTGAAGGGAGACAATCAGTGCACATGCACACA...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGAACTCTTGACCTTGTaGTCAGCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIELLTL*SAHLGL
Trigger: GAGGCCAAGGTGGGCTGATCACAAGGTCAAGAGTTC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACTGGCACTCACGTTGTaGCACCACCCAGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTLALTL*HHPAPW
Trigger: CCAGGGGGCTGGGTGGTGGCACAACGTGAGTGCCAG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCAGGAAGGCGCCAGCTaGCCCAATACGGGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSQEGAS*PNTGRE
Trigger: TTCTCTGCCCGTATTGGGGCAGCTGGCGCCTTCCTG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGGTGGTAGAAGAAGATaGCATCTTCGTAGCACTTTT +
Preference number: 4 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSGGRRR*HLRSTF
Trigger: AAAAGTGCTACGAAGATGGCATCTTCTTCTACCACC...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCCACCAACAGGACGCTaGCACCAAGCACCGCAGCTA +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSPPTGR*HQAPQL
Trigger: TAGCTGCGGTGCTTGGTGGCAGCGTCCTGTTGGTGG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAAGAAGGAGATCTCGCTaGCTCCTGGCACACCAGTCC +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSRRRSR*LLAHQS
Trigger: GGACTGGTGTGCCAGGAGGCAGCGAGATCTCCTTCT...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCTCTCCATCTCCAGGTTaGAGGGTCCGAGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSSPSPG*RVRGWR
Trigger: CCGCCATCCTCGGACCCTGCAACCTGGAGATGGAGA...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACCCATTGCGTCCAATaGAAGCACCTTCGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEITHCVQ*KHLRGS
Trigger: ACTGCCCCGAAGGTGCTTGCATTGGACGCAATGGGT...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAACTGCCGCGTCCACATaGACTTGCCCTCCCGCGTGC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTTAAST*TCPPAC
Trigger: GCACGCGGGAGGGCAAGTGCATGTGGACGCGGCAGT...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACCTGCTCCAAACACAGTaGTGCCAGCCCCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHLLQTQ*CQPPSA
Trigger: AGCAGATGGGGGCTGGCAGCACTGTGTTTGGAGCAG...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGACACTGCTGCAGGCTaGTGCTCCAAACACAGTGCT +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIDTAAG*CSKHSA
Trigger: AGCACTGTGTTTGGAGCAGCAGCCTGCAGCAGTGTC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCTGGCCACGCCAGCCATaGCATCTTCTGTGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSWPRQP*HLLWAR
Trigger: TCGAGCCCACAGAAGATGGCATGGCTGGCGTGGCCA...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTATCTAGCTTCTTTGAATaGCCAGCTGACTTCACCCCA +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILSSFFE*PADFTP
Trigger: TGGGGTGAAGTCAGCTGGGCATTCAAAGAAGCTAGA...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACAGGCTAGGTTCGGATaGTCCAGGAGAGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSQARFG*SRRDSS
Trigger: GGAGGAGTCTCTCCTGGACCATCCGAACCTAGCCTG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTAGCCCTATAGAGCGATaGAAGGCCCTGTATATGGAG +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSSPIER*KALYME
Trigger: CTCCATATACAGGGCCTTCCATCGCTCTATAGGGCT...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCGTGGAAAAGCTCAGTaGAGTTCACTCGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHRGKAQ*SSLAQR
Trigger: TCTCTGTGCGAGTGAACTCCACTGAGCTTTTCCACG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAGTGAGTACCGACCACTaGGAGGCGCTGCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTVSTDH*EALLGP
Trigger: AGGGCCGAGCAGCGCCTCCCAGTGGTCGGTACTCAC...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCATGCTCCTCGCAGAGTaGGCAGAGGGTAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSMLLAE*AEGRHQ
Trigger: CTGGTGCCTACCCTCTGCCCACTCTGCGAGGAGCAT...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCTCTGCAGACACTCATaGCAGGTCAGGAAGCCATCG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEILCRHS*QVRKPS
Trigger: CGATGGCTTCCTGACCTGCCATGAGTGTCTGCAGAG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCAGGCTGCGGTCCGACTaGACAACACCAGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSRLRSD*TTPVSR
Trigger: CCTGGACACTGGTGTTGTCCAGTCGGACCGCAGCCT...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCTGCTCCCCAGGAACTTaGCCCAGACCCCGAGATGAG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSCSPGT*PRPRDE
Trigger: CTCATCTCGGGGTCTGGGCCAAGTTCCTGGGGAGCA...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCTGGCTGCCCTTGGTGTaGTTGCGGCAGAGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSWLPLV*LRQSKQ
Trigger: CTGCTTGCTCTGCCGCAACCACACCAAGGGCAGCCA...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCTGGAGATGCAGATGTaGCTATTTCCACGACAAAAG +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPLEMQM*LFPRQK
Trigger: CTTTTGTCGTGGAAATAGCCACATCTGCATCTCCAG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTTCTTTGGCTCTCCCTTaGACATTTGTAACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPSLALP*TFVTPS
Trigger: GGAAGGAGTTACAAATGTCCAAGGGAGAGCCAAAGA...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTTCTTTGGCTCTCCCTTaGACATTTGTAACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLSLALP*TFVTPS
Trigger: GGAAGGAGTTACAAATGTCCAAGGGAGAGCCAAAGA...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGCGTGGCCATTACACTaGCATTTGGTGCACTTCCCG +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIAWPLH*HLVHFP
Trigger: CGGGAAGTGCACCAAATGCCAGTGTAATGGCCACGC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACCGGCGTTTGGGCTCATaGAAGCAGTTGGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHRRLGS*KQLVWD
Trigger: GTCCCAGACCAACTGCTTCCATGAGCCCAAACGCCG...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCATGGTGGGGCTGGGGGTaGCTGGATGTGTACAGTATG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSWWGWG*LDVYSM
Trigger: CATACTGTACACATCCAGCCACCCCCAGCCCCACCA...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACGTGACCCAGCTGCTGTaGATGAGAACCCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHVTQLL*MRTLGM
Trigger: CATGCCCAGGGTTCTCATCCACAGCAGCTGGGTCAC...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAGGGGAAGGGGGCCAGTaGTCTCCAAGTAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSGEGGQ*SPSRQC
Trigger: ACACTGTCTACTTGGAGACCACTGGCCCCCTTCCCC...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCCCTCCGAAGCCGGATaGGCCAGATCAGAGAGACGA +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSPSEAG*ARSERR
Trigger: TCGTCTCTCTGATCTGGCCCATCCGGCTTCGGAGGG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCATGATTCCCGGCACTTaGCGCATTGGTGCACTTCCC +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIMIPGT*RIGALP
Trigger: GGGAAGTGCACCAATGCGCCAAGTGCCGGGAATCAT...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAGCTGCCACAGTAGGCTaGGCACTCCTGCAGGCCACA +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTAATVG*ALLQAT
Trigger: TGTGGCCTGCAGGAGTGCTCAGCCTACTGTGGCAGC...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACCCAGGGCATTGTTaGGGTCCTGGCCTCCGAAAA +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSHPGHC*GPGLRK
Trigger: TTTTCGGAGGCCAGGACCTCAACAATGCCCTGGGTG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAGCGGCTGCTGAAAGGTaGGCAAGTGCAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTAAAER*ASAGQA
Trigger: TGCCTGGCCTGCACTTGCTCACCTTTCAGCAGCCGC...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACGCAGAAGGCAGCTATaGGGCTGCGGTCCGACTGGA +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTRRRQL*GCGPTG
Trigger: TCCAGTCGGACCGCAGCCTCATAGCTGCCTTCTGCG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCATCAGCAGAGAGTGGCTaGAGCACGTCCAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSSAESG*STSSHR
Trigger: CCTATGACTGGACGTGCTTCAGCCACTCTCTGCTGA...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACAGAGGGACATGCTGGTaGGGTTGTCCTGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHRGTCW*GCPGST
Trigger: TGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCT...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCAGAGGTCGTGCGGGGTaGGGCCTCCAGACACATATA +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSRGRAG*GLQTHI
Trigger: TATATGTGTCTGGAGGCCGCACCCCGCACGACCTCT...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCATCTTGGTCATCTCCTaGAAGTGCCGGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSILVIS*KCRRCS
Trigger: GGAGCAGCGCCGGCACTTGCAGGAGATGACCAAGAT...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCAGGGCCTCTGCCTTTaGTTCCCAAAGCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSQGLCL*FPKLFP
Trigger: CGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACCAATAAAACAAGCCTaGTCCCACCCCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSPIKQA*SHPRAS
Trigger: AGAGGCCCTGGGGTGGGAGCAGGCTTGTTTTATTGG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACTTGGCGCATTGGTaGACTTCCCGTCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSHLAHW*TSRPGG
Trigger: TCCTCCTGGACGGGAAGTGCACCAATGCGCCAAGTG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCGGAAGGCCCTGTATATaGAGTCATTATGGACGGGGC +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIGRPCI*SHYGRG
Trigger: GCCCCGTCCATAATGACTCCATATACAGGGCCTTCC...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTAAGACTCCCAGGTGTTaGCGGAGAAGTTGTATAGGA +
Preference number: 4 (lower is better)
Translates to: ACGVCACALIVSLHQNLSKTPRC*RRSCIG
Trigger: TCCTATACAACTTCTCCGCCAACACCTGGGAGTCTT...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAATGTGGTCTGTGTACATaGAGCAGTAGTCCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQCGLCT*SSSPSG
Trigger: ACCACTTGGACTACTGCTCCATGTACACAGACCACA...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACTGTGGTCTGTGTACATaGAGCAGTAGTCCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHCGLCT*SSSPSG
Trigger: ACCACTTGGACTACTGCTCCATGTACACAGACCACA...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAGGAAGCAGGTGTGGGTaGACTGGCACCAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTGSRCG*TGTRRT
Trigger: AGTGCGCCTGGTGCCAGTCCACCCACACCTGCTTCC...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACCAGCCACACTCGTaGCTCTGCAGACACTCATGG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSHQPHS*LCRHSW
Trigger: CCATGAGTGTCTGCAGAGCCACGAGTGTGGCTGGTG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACATGGGCACCCTCGGTGTaGTCCTGGCAGAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTWAPSV*SWQKQS
Trigger: GCTCTGCTTCTGCCAGGACCACACCGAGGGTGCCCA...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCAGGATGAGGAGCCATTaGCCTCCCAGTGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSRMRSH*PPSAAR
Trigger: TCGTGCTGCACTGGGAGGCCAATGGCTCCTCATCCT...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACACACACCCAGGCTCTaGTTACAAGTTCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSHTPRL*LQVPAP
Trigger: TGGGGCAGGAACTTGTAACCAGAGCCTGGGTGTGTG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACACTGCTGCCACAGCATaGGCCACAGACTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHTAATA*ATDSSI
Trigger: AATGGAGGAGTCTGTGGCCCATGCTGTGGCAGCAGT...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACTGGATGTGTACAGTATaGACGCCAGTGTCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHWMCTV*TPVSGA
Trigger: GGCCCCTGACACTGGCGTCCATACTGTACACATCCA...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCTGGTGGGGCTGGGGGTaGCTGGATGTGTACAGTATG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSWWGWG*LDVYSM
Trigger: CATACTGTACACATCCAGCCACCCCCAGCCCCACCA...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACCTGACATGCACGCATTaGCTAGGGCCTCTCACACTG +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHLTCTH*LGPLTL
Trigger: CAGTGTGAGAGGCCCTAGCCAATGCGTGCATGTCAG...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCTGTAGTTGGCATCACTaGAGAGGTGCAGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEICSWHH*RGAAAS
Trigger: AGATGCTGCTGCACCTCTTCAGTGATGCCAACTACA...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACACCGCAGCTACATGTaGGTACCGACCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTHRSYM*VPTTGR
Trigger: CCTCCCAGTGGTCGGTACTCACATGTAGCTGCGGTG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACATCTCCCCTGTCCTCTTaGACTGCCGCGTCCACATGC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTSPLSS*TAASTC
Trigger: GCATGTGGACGCGGCAGTTCAAGAGGACAGGGGAGA...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAAACAGGGCTGTGCACTaGCGGTACCGGCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSNRAVH*RYRHFH
Trigger: ATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTT...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACATGGTTCTCCCACAGGTaGAGGTCACAGGCACGTCCC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTWFSHR*RSQARP
Trigger: GGGACGTGCCTGTGACCTGCACCTGTGGGAGAACCA...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTAGGTGGTAGAAGAAGATaGCATCTTCGTAGCACTTTT +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILGGRRR*HLRSTF
Trigger: AAAAGTGCTACGAAGATGGCATCTTCTTCTACCACC...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCTGGGGTTGTCCTCATTaGCACACCAGCCACACTCGT +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSWGCPH*HTSHTR
Trigger: ACGAGTGTGGCTGGTGTGGCAATGAGGACAACCCCA...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCCAAGCACGTGCGGTTaGAGTGTGAGATGCCATCAC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSPSTCG*SVRCHH
Trigger: GTGATGGCATCTCACACTGCAACCGCACGTGCTTGG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACTGGTATAGCCGGTCTTaGAGCTGCACTCATAGCCGT +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHWYSRS*SCTHSR
Trigger: ACGGCTATGAGTGCAGCTGCAAGACCGGCTATACCA...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACATCTTACTTGTGTGTaGACATGTGCATGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGHLTCV*TCACVH
Trigger: ATGAACACATGCACATGTGCACACACAAGTAAGATG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCCAATAAAACAAGCCTaGTCCCACCCCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSPIKQA*SHPRAS
Trigger: AGAGGCCCTGGGGTGGGAGCAGGCTTGTTTTATTGG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAAGAAGGCAGGGTCCCTaGCACTCACGTTGTGCCACC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTRRQGP*HSRCAT
Trigger: GGTGGCACAACGTGAGTGCCAGGGACCCTGCCTTCT...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGCATTGTTGAGGTCCTaGCCTCCGAAAACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSALLRS*PPKTAS
Trigger: GCTGGCAGTTTTCGGAGGCCAGGACCTCAACAATGC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCGTGGAAAAGCTCAGTaGAGTTCACTCGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIRGKAQ*SSLAQR
Trigger: TCTCTGTGCGAGTGAACTCCACTGAGCTTTTCCACG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACATGCAGCGGCATTCCGTaGAGCAGTTGCGGCCCACAA +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTCSGIP*SSCGPQ
Trigger: TTGTGGGCCGCAACTGCTCCACGGAATGCCGCTGCA...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACTTTGTAACTCCTTCCTaGAGATGCAGATGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: PKSHEIREPRLLVPALPHFVTPS*RCRCGY
Trigger: ATAGCCACATCTGCATCTCCAGGAAGGAGTTACAAA...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTATTTGTAACTCCTTCCTaGAGATGCAGATGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: LPHPLEASQCFSLSEAILFVTPS*RCRCGY
Trigger: ATAGCCACATCTGCATCTCCAGGAAGGAGTTACAAA...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAATCTTTGGCTCTCCCTTaGACATTTGTAACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SPVPPGASDGSLGKGESQSLALP*TFVTPS
Trigger: GGAAGGAGTTACAAATGTCCAAGGGAGAGCCAAAGA...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCATGTGTGCATGTGCACTaGTTGTCTCCCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSCVHVH*LSPFTR
Trigger: TCTGGTGAAGGGAGACAATCAGTGCACATGCACACA...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCGATCCCATGAACAGTaGCCAGCATTACGGACTCAG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSRSHEQ*PALRTQ
Trigger: CTGAGTCCGTAATGCTGGGCACTGTTCATGGGATCG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACCACACTCGTGGCTCTaGAGACACTCATGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTPHSWL*RHSWQV
Trigger: GACCTGCCATGAGTGTCTGCAGAGCCACGAGTGTGG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAACTGCTGCAGGCTGCTaGTCCAAACACAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTTAAGC*SKHSAA
Trigger: GGCAGCACTGTGTTTGGAGCAGCAGCCTGCAGCAGT...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACATGCCCTTGGTGTGGTTaGGGCAGAGCAAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTCPWCG*GRASSG
Trigger: ACCACTGCTTGCTCTGCCGCAACCACACCAAGGGCA...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACAGCCCTATAGAGCGATaGAAGGCCCTGTATATGGAG +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHSPIER*KALYME
Trigger: CTCCATATACAGGGCCTTCCATCGCTCTATAGGGCT...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACAGGCCGTAAAAACCTaGAGAGGACCCTCTACCCGG +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTQAVKT*RGPSTR
Trigger: CCGGGTAGAGGGTCCTCTCCAGGTTTTTACGGCCTG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAAGAACACTGGCTGTGTaGAAGGCTCGCTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTRTLAV*KARSLG
Trigger: CCCAAGGGAGCGAGCCTTCCACACAGCCAGTGTTCT...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACATCTACTGCATACTTGTaGTCCCGCCCAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTSTAYL*SRPGRG
Trigger: CCCTCTGCCTGGGCGGGACCACAAGTATGCAGTAGA...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAACGTCCAGTCATAGGTaGGCTGCACGGAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTTSSHR*AARRGC
Trigger: GCATCCTCTCCGTGCAGCCCACCTATGACTGGACGT...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACATGGTGGGGCTGGGGGTaGCTGGATGTGTACAGTATG +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTWWGWG*LDVYSM
Trigger: CATACTGTACACATCCAGCCACCCCCAGCCCCACCA...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCGTGCTTCTCCCTCTCTaGAGCCATCTTACTTGTGTG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSVLLPL*SHLTCV
Trigger: CACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCAC...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR TCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAATCCCTAGTTGGACCTaGGTGAAGAGATGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSIPSWT*VKRCLK
Trigger: CTTCAGACATCTCTTCACTCAGGTCCAACTAGGGAT...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAAGTCCTCCAAGCACGTaGGGTTGCAGTGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTSPPST*GCSVRC
Trigger: GCATCTCACACTGCAACCGCACGTGCTTGGAGGACT...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACATCTGGAACAGGGCTGTaGACTGACGGTACCGGCATT +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTSGTGL*TDGTGI
Trigger: AATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGA...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR GCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACACGCGAAGGGAAGATaGAAAGTCCAGTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTHAKGR*KVQSLQ
Trigger: CTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCAGCCCTATAGAGCGATaGAAGGCCCTGTATATGGAG +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSSPIER*KALYME
Trigger: CTCCATATACAGGGCCTTCCATCGCTCTATAGGGCT...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCACATGCCGATCCACGTaGAAAAGCTCAGTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSTCRST*KSSVEF
Trigger: GAACTCCACTGAGCTTTTCCACGTGGATCGGCATGT...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCATGTGGTCTGTGTACATaGAGCAGTAGTCCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSCGLCT*SSSPSG
Trigger: ACCACTTGGACTACTGCTCCATGTACACAGACCACA...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAGTTCCTGCCCCAGTGTaGGCATTGCAGTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTVPAPV*ALQFSG
Trigger: TCCTGAGAACTGCAATGCCCACACTGGGGCAGGAAC...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCAGAAGACCTCTCGCTaGTTGATCCGACAGTCATTC +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSQKTSR*LIRQSF
Trigger: GAATGACTGTCGGATCAACCAGCGAGAGGTCTTCTG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCCATATTGGCCAGGCTaGTCACGAACTCTTGACCTT +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSPYWPG*SRTLDL
Trigger: AAGGTCAAGAGTTCGTGACCAGCCTGGCCAATATGG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACACAGGTAGTCATACGTaGACTCTGTGTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHTGSHT*TLCPGK
Trigger: TTTTCCTGGACACAGAGTGCACGTATGACTACCTGT...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAGGAAGGCCCTGTATATaGAGTCATTATGGACGGGGC +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTGRPCI*SHYGRG
Trigger: GCCCCGTCCATAATGACTCCATATACAGGGCCTTCC...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR TCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCATCTATAGGCATAACATaGCCTTGTAGATCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSSIGIT*PCRSKR
Trigger: CCTCTTCGATCTACAAGGTCATGTTATGCCTATAGA...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAACATTCAGCAGAGAGTaGCTGAAGCACGTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTTFSRE*LKHVQS
Trigger: TGACTGGACGTGCTTCAGCCACTCTCTGCTGAATGT...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CCA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACCATATTGGCCAGGCTaGTCACGAACTCTTGACCTT +
Preference number: 4 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTPYWPG*SRTLDL
Trigger: AAGGTCAAGAGTTCGTGACCAGCCTGGCCAATATGG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACATCTTACTTGTGTGTaGACATGTGCATGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: CACALIVSLHQNLSPMRSHLTCV*TCACVH
Trigger: ATGAACACATGCACATGTGCACACACAAGTAAGATG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCTTTGTAACTCCTTCCTaGAGATGCAGATGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSFVTPS*RCRCGY
Trigger: ATAGCCACATCTGCATCTCCAGGAAGGAGTTACAAA...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR GCA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCATCTTACTTGTGTGTaGACATGTGCATGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSHLTCV*TCACVH
Trigger: ATGAACACATGCACATGTGCACACACAAGTAAGATG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp CCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTGGCGCCGGGCCGAGTCGGCTGAGCCGTaGGCGCCGGGCCCACTTGGG +
Preference number: 5 (lower is better)
Translates to: PAGRRAGPASRLSRWRRAESAEP*APGPLG
Trigger: CCCAAGTGGGCCCGGCGCCAACGGCTCAGCCGACTC...GGCCCGGCGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS GCA 90 bp CAGAGCCCACTGAGGTTGTCGCAGTGGCCACGGCGTGGGTCCCCGTaGCCGTTGCACTGGCAGGGCCGGCAGCCCCTAGAGCCTGTGGCG +
Preference number: 5 (lower is better)
Translates to: QSPLRLSQWPRRGSP*PLHWQGRQPLEPVA
Trigger: CGCCACAGGCTCTAGGGGCTGCCGGCCCTGCCAGTGCAACGGGCACGGGGACCCACGCCGTGGCCACTGCGACAACCTCAGTGGGCTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593840.1
CDS CCA 90 bp AGGAGCCTCCATAGAGGCTGCGGGCCGGGACAGGCTAGGTTCGGATaGTCCAGGAGAGACTCCTCCAGCCGGGGGCGGGGCGCGAGCGGG +
Preference number: 5 (lower is better)
Translates to: RSLHRGCGPGQARFG*SRRDSSSRGRGASG
Trigger: CCCGCTCGCGCCCCGCCCCCGGCTGGAGGAGTCTCTCCTGGACCATCCGAACCTAGCCTGTCCCGGCCCGCAGCCTCTATGGAGGCTCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp AGCAGGGACCCACCAGCCCCGTCATCCCCGCAATGGGCTCCGCCCTaGCGCAGGTGGCAGGTGGCACTGGTCAGGCACCAGCCACAGCCC +
Preference number: 5 (lower is better)
Translates to: SRDPPAPSSPQWAPP*RRWQVALVRHQPQP
Trigger: GGGCTGTGGCTGGTGCCTGACCAGTGCCACCTGCCACCTGCGCCAGGGCGGAGCCCATTGCGGGGATGACGGGGCTGGTGGGTCCCTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp GGCACCAGCACCAGCAGGGACCCACCAGCCCCGTCATCCCCGCAATaGGCTCCGCCCTGGCGCAGGTGGCAGGTGGCACTGGTCAGGCAC +
Preference number: 5 (lower is better)
Translates to: GTSTSRDPPAPSSPQ*APPWRRWQVALVRH
Trigger: GTGCCTGACCAGTGCCACCTGCCACCTGCGCCAGGGCGGAGCCCATTGCGGGGATGACGGGGCTGGTGGGTCCCTGCTGGTGCTGGTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp AGCGGGCACATATGCGGCTGCATGGAAGGAGCGGGGCGATGGGCCTaGGCCCCCGTCCTCGGCTCCCGCCAGCATCTGTGTCCACCGCCG +
Preference number: 5 (lower is better)
Translates to: SGHICGCMEGAGRWA*APVLGSRQHLCPPP
Trigger: CGGCGGTGGACACAGATGCTGGCGGGAGCCGAGGACGGGGGCCCAGGCCCATCGCCCCGCTCCTTCCATGCAGCCGCATATGTGCCCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp CCTCGGCAGCGGGCCTGCTCAGGCCTAGGGAGGCAGCTCTCATTGTaGACGCACCAGCCCAGGGTGCCAGGTCCCCGTGGAGGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: PRQRACSGLGRQLSL*THQPRVPGPRGGAV
Trigger: CACAGCCCCTCCACGGGGACCTGGCACCCTGGGCTGGTGCGTGCACAATGAGAGCTGCCTCCCTAGGCCTGAGCAGGCCCGCTGCCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp GTGTCGGCTGAGAGGCGGCTGTCCATGAGGGTCTCCCAGACCAGCTaGCCGCCATCCAGCTTGGTGGCGCAGTCGGGGCCCCCGAAGCCC +
Preference number: 5 (lower is better)
Translates to: VSAERRLSMRVSQTS*PPSSLVAQSGPPKP
Trigger: GGGCTTCGGGGGCCCCGACTGCGCCACCAAGCTGGATGGCGGGCAGCTGGTCTGGGAGACCCTCATGGACAGCCGCCTCTCAGCCGACAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CATCCCCGCAATGGGCTCCGCCCTGGCGCAGGTGGCAGGTGGCACTaGTCAGGCACCAGCCACAGCCCTGGTCTGCCAAGCAGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: HPRNGLRPGAGGRWH*SGTSHSPGLPSSPG
Trigger: GCCTGGGCTGCTTGGCAGACCAGGGCTGTGGCTGGTGCCTGACCAGTGCCACCTGCCACCTGCGCCAGGGCGGAGCCCATTGCGGGGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CCCCGTCATCCCCGCAATGGGCTCCGCCCTGGCGCAGGTGGCAGGTaGCACTGGTCAGGCACCAGCCACAGCCCTGGTCTGCCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: PRHPRNGLRPGAGGR*HWSGTSHSPGLPSS
Trigger: GCTGCTTGGCAGACCAGGGCTGTGGCTGGTGCCTGACCAGTGCCACCTGCCACCTGCGCCAGGGCGGAGCCCATTGCGGGGATGACGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp GGGGTCCTGGGTGCAGGCGTGGCAGTCCCGATGCTCCTCGCAGAGTaGGCAGAGGGTAGGCACCAGCACCAGCAGGGACCCACCAGCCCC +
Preference number: 5 (lower is better)
Translates to: GVLGAGVAVPMLLAE*AEGRHQHQQGPTSP
Trigger: GGGGCTGGTGGGTCCCTGCTGGTGCTGGTGCCTACCCTCTGCCCACTCTGCGAGGAGCATCGGGACTGCCACGCCTGCACCCAGGACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp AGGTTGTCGCAGTGGCCACGGCGTGGGTCCCCGTGCCCGTTGCACTaGCAGGGCCGGCAGCCCCTAGAGCCTGTGGCGTTGCCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RLSQWPRRGSPCPLH*QGRQPLEPVALPKL
Trigger: CAGCTTCGGCAACGCCACAGGCTCTAGGGGCTGCCGGCCCTGCCAGTGCAACGGGCACGGGGACCCACGCCGTGGCCACTGCGACAACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593840.1
CDS CCA 90 bp ACGGCCAGCGGGCACATATGCGGCTGCATGGAAGGAGCGGGGCGATaGGCCTGGGCCCCCGTCCTCGGCTCCCGCCAGCATCTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: TASGHICGCMEGAGR*AWAPVLGSRQHLCP
Trigger: TGGACACAGATGCTGGCGGGAGCCGAGGACGGGGGCCCAGGCCCATCGCCCCGCTCCTTCCATGCAGCCGCATATGTGCCCGCTGGCCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCCCAGGCAGGCGCCGTaGGGTGCATGGGGCCCGCCA +
Preference number: 5 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGPRQAP*GAWGPP
Trigger: TGGCGGGCCCCATGCACCCAACGGCGCCTGCCTGGG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 90 bp GGACGTGACGAAGACAGGCGCAGGCCCCCACCAGCCCACAGTGCCTaGGATCTGCTCCCCTCGGCAGCGGGCCTGCTCAGGCCTAGGGAG +
Preference number: 5 (lower is better)
Translates to: GRDEDRRRPPPAHSA*DLLPSAAGLLRPRE
Trigger: CTCCCTAGGCCTGAGCAGGCCCGCTGCCGAGGGGAGCAGATCTCAGGCACTGTGGGCTGGTGGGGGCCTGCGCCTGTCTTCGTCACGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 90 bp GGCAGTGGGCACCCTCGGTGTGGTCCTGGCAGAAGCAGAGCCCACTaGGGTTGTCGCAGTGGCCACGGCGTGGGTCCCCGTGCCCGTTGC +
Preference number: 5 (lower is better)
Translates to: GSGHPRCGPGRSRAH*GCRSGHGVGPRARC
Trigger: GCAACGGGCACGGGGACCCACGCCGTGGCCACTGCGACAACCTCAGTGGGCTCTGCTTCTGCCAGGACCACACCGAGGGTGCCCACTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593840.1
CDS GCA 90 bp ACGAAGACAGGCGCAGGCCCCCACCAGCCCACAGTGCCTGAGATCTaGTCCCCTCGGCAGCGGGCCTGCTCAGGCCTAGGGAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: TKTGAGPHQPTVPEI*SPRQRACSGLGRQL
Trigger: GAGCTGCCTCCCTAGGCCTGAGCAGGCCCGCTGCCGAGGGGAGCAGATCTCAGGCACTGTGGGCTGGTGGGGGCCTGCGCCTGTCTTCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CCATGGACCAGCAGGGCACGGGAGGGGGCATGGAACACCATGGAGTaGCCAGTGGCAGCAGGGGGCCGTCCGCCTGCCGGAATCACCTGC +
Preference number: 5 (lower is better)
Translates to: PWTSRAREGAWNTME*PVAAGGRPPAGITC
Trigger: GCAGGTGATTCCGGCAGGCGGACGGCCCCCTGCTGCCACTGGCCACTCCATGGTGTTCCATGCCCCCTCCCGTGCCCTGCTGGTCCATGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CTGGCAGAAGCAGAGCCCACTGAGGTTGTCGCAGTGGCCACGGCGTaGGTCCCCGTGCCCGTTGCACTGGCAGGGCCGGCAGCCCCTAGA +
Preference number: 5 (lower is better)
Translates to: LAEAEPTEVVAVATA*VPVPVALAGPAAPR
Trigger: TCTAGGGGCTGCCGGCCCTGCCAGTGCAACGGGCACGGGGACCCACGCCGTGGCCACTGCGACAACCTCAGTGGGCTCTGCTTCTGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593840.1
CDS CCA 90 bp AGCAGATACATGGCACCACGGCCAGCGGGCACATATGCGGCTGCATaGAAGGAGCGGGGCGATGGGCCTGGGCCCCCGTCCTCGGCTCCC +
Preference number: 5 (lower is better)
Translates to: SRYMAPRPAGTYAAA*KERGDGPGPPSSAP
Trigger: GGGAGCCGAGGACGGGGGCCCAGGCCCATCGCCCCGCTCCTTCCATGCAGCCGCATATGTGCCCGCTGGCCGTGGTGCCATGTATCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCTGGCGCCGGGCCCACTaGGGTCTCCCACGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGWRRAH*GLPRPA
Trigger: TGCTGGGCGTGGGAGACCCAAGTGGGCCCGGCGCCA...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 90 bp AGATGCCATCACCCTGGTAGCCCCGCTGGCAGTGACACTCGTAGCTaGGGGGCGTGTTCAGGCAGGTCGCCCGCGGGTGGCACCGGGCCA +
Preference number: 5 (lower is better)
Translates to: RCHHPGSPAGSDTRS*GACSGRSPAGGTGP
Trigger: TGGCCCGGTGCCACCCGCGGGCGACCTGCCTGAACACGCCCCTCAGCTACGAGTGTCACTGCCAGCGGGGCTACCAGGGTGATGGCATCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 90 bp TTCTCAGGACACAGAGCCATGCGGCAGTGTGGGCCAGCCCAGCCCTaGGGACATCGGCAGAGCCCCGCACCTGCAGCACCGTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: FSGHRAMRQCGPAQP*GHRQSPAPAAPSWG
Trigger: GCCCCAGGACGGTGCTGCAGGTGCGGGGCTCTGCCGATGTCCTCAGGGCTGGGCTGGCCCACACTGCCGCATGGCTCTGTGTCCTGAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 90 bp GCCCACAAAGCCAAAGTGGCAGCGGCAGTGGTCGGGCTCCACACATaGGCCGTTCACGCAGCCCTGGGCGCACACAGGGCGGCACAGCCC +
Preference number: 5 (lower is better)
Translates to: AHKAKVAAAVVGLHT*AVHAALGAHRAAQP
Trigger: GGGCTGTGCCGCCCTGTGTGCGCCCAGGGCTGCGTGAACGGCTCATGTGTGGAGCCCGACCACTGCCGCTGCCACTTTGGCTTTGTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp CCCATGTCCAGTCCTGGCACTCGTCGCAGAAGCCAGGGCCCCGCTTaGGGCAGTGGCTGTGGAAGCTGCAGCCACAGTCCCGGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: PMSSPGTRRRSQGPA*GSGCGSCSHSPGSS
Trigger: GCTGCTCCCGGGACTGTGGCTGCAGCTTCCACAGCCACTGCCGCAAGCGGGGCCCTGGCTTCTGCGACGAGTGCCAGGACTGGACATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593840.1
CDS CCA 90 bp GCTGGAGGCAGGTGGTGCCAGGAGCTCCCAGTGGCCCCTGCCCAGTaGACTGAAGGCCCACACGTCGTTGGTGAGCGAGCCGTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: AGGRWCQELPVAPAQ*TEGPHVVGERAVSQ
Trigger: CTGGCTGACGGCTCGCTCACCAACGACGTGTGGGCCTTCAGTCCACTGGGCAGGGGCCACTGGGAGCTCCTGGCACCACCTGCCTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CCAGCAGGGCACGGGAGGGGGCATGGAACACCATGGAGTGGCCAGTaGCAGCAGGGGGCCGTCCGCCTGCCGGAATCACCTGCTCCCAAT +
Preference number: 5 (lower is better)
Translates to: PAGHGRGHGTPWSGQ*QQGAVRLPESPAPN
Trigger: ATTGGGAGCAGGTGATTCCGGCAGGCGGACGGCCCCCTGCTGCCACTGGCCACTCCATGGTGTTCCATGCCCCCTCCCGTGCCCTGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp TGCGGCCGGGGCCTAGCGCCCGGCGTTTGGGCTCATGGAAGCAGTTaGTCTGGGACGTGGGGTCCAGGCAGCACTCCTGCTCCACCGAGA +
Preference number: 5 (lower is better)
Translates to: CGRGLAPGVWAHGSS*SGTWGPGSTPAPPR
Trigger: TCTCGGTGGAGCAGGAGTGCTGCCTGGACCCCACGTCCCAGACCAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAGGCCCCGGCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS CCA 90 bp GCACGCCAAAGAGGACAGTGCGGCCGGGGCCTAGCGCCCGGCGTTTaGGCTCATGGAAGCAGTTGGTCTGGGACGTGGGGTCCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: ARQRGQCGRGLAPGV*AHGSSWSGTWGPGS
Trigger: GCTGCCTGGACCCCACGTCCCAGACCAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAGGCCCCGGCCGCACTGTCCTCTTTGGCGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS-3UTR CAA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACCCAGGCAGGCGCCGTaGGGTGCATGGGGCCCGCCA +
Preference number: 5 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASPRQAP*GAWGPP
Trigger: TGGCGGGCCCCATGCACCCAACGGCGCCTGCCTGGG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS CCA 90 bp CCGGGGCCTAGCGCCCGGCGTTTGGGCTCATGGAAGCAGTTGGTCTaGGACGTGGGGTCCAGGCAGCACTCCTGCTCCACCGAGATGAGG +
Preference number: 5 (lower is better)
Translates to: PGPSARRLGSWKQLV*DVGSRQHSCSTEMR
Trigger: CCTCATCTCGGTGGAGCAGGAGTGCTGCCTGGACCCCACGTCCCAGACCAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAGGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS CCA 90 bp AAGAGGACAGTGCGGCCGGGGCCTAGCGCCCGGCGTTTGGGCTCATaGAAGCAGTTGGTCTGGGACGTGGGGTCCAGGCAGCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: KRTVRPGPSARRLGS*KQLVWDVGSRQHSC
Trigger: GCAGGAGTGCTGCCTGGACCCCACGTCCCAGACCAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAGGCCCCGGCCGCACTGTCCTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS CCA 90 bp CCCAATCCCTTTGCTCACCCACCCTCGCCTCCCTCCGAAGCCGGATaGGCCAGATCAGAGAGACGAGGGGACGCTTGGGCCAGAGCGGCC +
Preference number: 5 (lower is better)
Translates to: PNPFAHPPSPPSEAG*ARSERRGDAWARAA
Trigger: GGCCGCTCTGGCCCAAGCGTCCCCTCGTCTCTCTGATCTGGCCCATCCGGCTTCGGAGGGAGGCGAGGGTGGGTGAGCAAAGGGATTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTGGGTCCCCGTGCCCGTaGCACTGGCAGGGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSGSPCP*HWQGRQ
Trigger: CTGCCGGCCCTGCCAGTGCAACGGGCACGGGGACCC...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGGCCACTGAGGACACGTaGGTGAGGAGGGCGCGACCC +
Preference number: 5 (lower is better)
Translates to: RGQESKEVAQVRGGASGEATEDT*VRRARP
Trigger: GGGTCGCGCCCTCCTCACCAACGTGTCCTCAGTGGC...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGGCCAGGCCCGGCTCTaGCAGCCCCGCCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAGQARL*QPRHLE
Trigger: CTCCAGGTGGCGGGGCTGCAAGAGCCGGGCCTGGCC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCATGCCCGCCATCCAGCTaGGTGGCGCAGTCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASCPPSS*VAQSGP
Trigger: GGGCCCCGACTGCGCCACCAAGCTGGATGGCGGGCA...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCATGGCGCCGGGCCCACTaGGGTCTCCCACGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASWRRAH*GLPRPA
Trigger: TGCTGGGCGTGGGAGACCCAAGTGGGCCCGGCGCCA...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp ACGGCCCCGAAGGTCACGTCCAGCGTCAGGCGGATGTCCACGTTGGTGAATTTGCCCAGGCAGGCGCCGTaGGGTGCATGGGGCCCGCCA +
Preference number: 5 (lower is better)
Translates to: TAPKVTSSVRRMSTLVNLPRQAP*GAWGPP
Trigger: TGGCGGGCCCCATGCACCCAACGGCGCCTGCCTGGG...CAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTCGGGGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS TCA 90 bp CCCAGCCACCAACAGGACGCTGCCACCAAGCACCGCAGCTACATGTaGGTACCGACCACTGGGAGGCGCTGCTCGGCCCTCAGGGGTTCC +
Preference number: 5 (lower is better)
Translates to: PSHQQDAATKHRSYM*VPTTGRRCSALRGS
Trigger: GGAACCCCTGAGGGCCGAGCAGCGCCTCCCAGTGGTCGGTACTCACATGTAGCTGCGGTGCTTGGTGGCAGCGTCCTGTTGGTGGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 90 bp TGGTCTGGGACGTGGGGTCCAGGCAGCACTCCTGCTCCACCGAGATaGGGCGGTAGCACTGCTGGCCGCCCAGCGGACTCCCGTGAAATG +
Preference number: 5 (lower is better)
Translates to: WSGTWGPGSTPAPPR*GGSTAGRPADSREM
Trigger: CATTTCACGGGAGTCCGCTGGGCGGCCAGCAGTGCTACCGCCTCATCTCGGTGGAGCAGGAGTGCTGCCTGGACCCCACGTCCCAGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS GCA 90 bp CCGTCTTCAGGGGTTCGGGCCTGGACCCCACAGACCCAATCCCTTTaGTCACCCACCCTCGCCTCCCTCCGAAGCCGGATGGGCCAGATC +
Preference number: 5 (lower is better)
Translates to: PSSGVRAWTPQTQSL*SPTLASLRSRMGQI
Trigger: GATCTGGCCCATCCGGCTTCGGAGGGAGGCGAGGGTGGGTGAGCAAAGGGATTGGGTCTGTGGGGTCCAGGCCCGAACCCCTGAAGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp ACCCCAGCACGGCCAAGGCCAAAACCAGTGCCATGGCCAGAACCTTaGCCAGGGCCATCGCCGCCTCCTGCACTGACCCTTAGAGCGGGG +
Preference number: 5 (lower is better)
Translates to: TPARPRPKPVPWPEP*PGPSPPPALTLRAG
Trigger: CCCCGCTCTAAGGGTCAGTGCAGGAGGCGGCGATGGCCCTGGGCAAGGTTCTGGCCATGGCACTGGTTTTGGCCTTGGCCGTGCTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp CACAAGGTGGCATCGGGTCCATCCACCATGGTGTGGCCCAGGCGGTaGAGGAAGCGGCTGGCAGTGTCGGCTGAGAGGCGGCTGTCCATG +
Preference number: 5 (lower is better)
Translates to: HKVASGPSTMVWPRR*RKRLAVSAERRLSM
Trigger: CATGGACAGCCGCCTCTCAGCCGACACTGCCAGCCGCTTCCTGCACCGCCTGGGCCACACCATGGTGGATGGACCCGATGCCACCTTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp CTCTTGAACTGCCGCGTCCACATGCACTTGCCCTCCCGCGTGCACTaGTCGCAGTCAGCAGCCCCGCACGCAGCCTCGGAGCAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: LLNCRVHMHLPSRVH*SQSAAPHAASEQFP
Trigger: AGGGAACTGCTCCGAGGCTGCGTGCGGGGCTGCTGACTGCGAGCAGTGCACGCGGGAGGGCAAGTGCATGTGGACGCGGCAGTTCAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp GTCACGTCCAGCGTCAGGCGGATGTCCACGTTGGTGAATTTGGGCTaGACGCCAAAGAGGACAGTGCGGCCGGGGCCTAGCGCCCGGCGT +
Preference number: 5 (lower is better)
Translates to: VTSSVRRMSTLVNLG*TPKRTVRPGPSARR
Trigger: ACGCCGGGCGCTAGGCCCCGGCCGCACTGTCCTCTTTGGCGTGCAGCCCAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS CCA 90 bp TTACGGACTCAGGCTGCTGCAGGCCAAACGGACCTTATAGACGGGTaGGTCCCCAGGGGGCGAAGGGCTCTACGGCCCGGCAGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: LRTQAAAGQTDLIDG*VPRGRRALRPGRSL
Trigger: GAGGCTCCTGCCGGGCCGTAGAGCCCTTCGCCCCCTGGGGACCCACCCGTCTATAAGGTCCGTTTGGCCTGCAGCAGCCTGAGTCCGTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CCAGGCCCCCAAACATCCACAAGGTGGCATCGGGTCCATCCACCATaGTGTGGCCCAGGCGGTGCAGGAAGCGGCTGGCAGTGTCGGCTG +
Preference number: 5 (lower is better)
Translates to: PGPQTSTRWHRVHPP*CGPGGAGSGWQCRL
Trigger: CAGCCGACACTGCCAGCCGCTTCCTGCACCGCCTGGGCCACACCATGGTGGATGGACCCGATGCCACCTTGTGGATGTTTGGGGGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp TCCGTGGAGCAGTTGCGGCCCACAAAGCCAAAGTGGCAGCGGCAGTaGTCGGGCTCCACACATGAGCCGTTCACGCAGCCCTGGGCGCAC +
Preference number: 5 (lower is better)
Translates to: SVEQLRPTKPKWQRQ*SGSTHEPFTQPWAH
Trigger: GTGCGCCCAGGGCTGCGTGAACGGCTCATGTGTGGAGCCCGACCACTGCCGCTGCCACTTTGGCTTTGTGGGCCGCAACTGCTCCACGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGGGGCCTGCCGAGCCATaGAGCTGGCCCTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQGPAEP*SWPWIS
Trigger: AGAGATCCAGGGCCAGCTCAATGGCTCGGCAGGCCC...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCGGGCCTGCCGAGCCATaGAGCTGGCCCTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGGPAEP*SWPWIS
Trigger: AGAGATCCAGGGCCAGCTCAATGGCTCGGCAGGCCC...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACTAGAGCCTGTGGCGTaGCCGAAGCTGCCGGGCCGG +
Preference number: 5 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASLEPVA*PKLPGR
Trigger: CCGGCCCGGCAGCTTCGGCAACGCCACAGGCTCTAG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGGGTCCCCGTGCCCGTaGCACTGGCAGGGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVGSPCP*HWQGRQ
Trigger: CTGCCGGCCCTGCCAGTGCAACGGGCACGGGGACCC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGCAGAGCCCACTGAGGTaGTCGCAGTGGCCACGGCGT +
Preference number: 5 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQQSPLR*SQWPRR
Trigger: ACGCCGTGGCCACTGCGACAACCTCAGTGGGCTCTG...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CCTGCCGGAAGAAGAGCAGGCCCTGCGAGTCGGCTGAGCCGTTGGCGCCGGGCCTCCACGTTGGTGAATTaGGGCTGCACGCCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: PAGRRAGPASRLSRWRRASTLVN*GCTPKR
Trigger: CCTCTTTGGCGTGCAGCCCAAATTCACCAACGTGGA...GGCCCGGCGCCAACGGCTCAGCCGACTCGCAGGGCCTGCTCTTCTTCCGGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS TCA 90 bp ACGACAAAAGGCGTGGCAGGGCCGGCAGGTCCCGCCTCCGACAGCTaGACCCACAAACAGCGGGAGGCACTGCTCACAGTGGCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: TTKGVAGPAGPASDS*THKQREALLTVAAL
Trigger: AAGGGCAGCCACTGTGAGCAGTGCCTCCCGCTGTTTGTGGGTTCAGCTGTCGGAGGCGGGACCTGCCGGCCCTGCCACGCCTTTTGTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS TCA 90 bp CGGCCCCGAAGGTCACGTCCAGCGTCAGGCGGATGTCCACGTTGGTaGATTTGGGCTGCACGCCAAAGAGGACAGTGCGGCCGGGGCCTA +
Preference number: 5 (lower is better)
Translates to: RPRRSRPASGGCPRW*IWAARQRGQCGRGL
Trigger: TAGGCCCCGGCCGCACTGTCCTCTTTGGCGTGCAGCCCAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTCGGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS GCA 90 bp GCAGCAGCATCTTGCCTGAGGAAGCTTCGATGGGCGGAGGTCGGGTaGTCCCACTTAGACTGGCAAGCAGCGGCCCTCGCGGGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: AAASCLRKLRWAEVG*SHLDWQAAALAGSH
Trigger: GTGACTCCCCGCGAGGGCCGCTGCTTGCCAGTCTAAGTGGGAGCACCCGACCTCCGCCCATCGAAGCTTCCTCAGGCAAGATGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp ATGGAACACCATGGAGTGGCCAGTGGCAGCAGGGGGCCGTCCGCCTaGCGGAATCACCTGCTCCCAATAGCCCCCGCTGGTGCTGTCAAG +
Preference number: 5 (lower is better)
Translates to: MEHHGVASGSRGPSA*RNHLLPIAPAGAVK
Trigger: CTTGACAGCACCAGCGGGGGCTATTGGGAGCAGGTGATTCCGGCAGGCGGACGGCCCCCTGCTGCCACTGGCCACTCCATGGTGTTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp GGGTCCCAGGAGGGGGTGCAGCTTGGCAGGCTCCTTGGCACCAACTaGATTCCGGGTCCCGGGAGCAGACGCTGTGGTCTGTGTACATGG +
Preference number: 5 (lower is better)
Translates to: GSQEGVQLGRLLGTN*IPGPGSRRCGLCTW
Trigger: CCATGTACACAGACCACAGCGTCTGCTCCCGGGACCCGGAATGCAGTTGGTGCCAAGGAGCCTGCCAAGCTGCACCCCCTCCTGGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp CATCTCCAGGTTGCAGGGTCCGAGGATGGCGGGCCAGGCACTCACTaGAGGTCCGGAGACGTCGACATTCCTCCGGGGAGCGAGGCATTG +
Preference number: 5 (lower is better)
Translates to: HLQVAGSEDGGPGTH*RSGDVDIPPGSEAL
Trigger: CAATGCCTCGCTCCCCGGAGGAATGTCGACGTCTCCGGACCTGCAGTGAGTGCCTGGCCCGCCATCCTCGGACCCTGCAACCTGGAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000598762.1
CDS CCA 90 bp GACCCGGCAGTCCCGGCGAAGGGTACGGCCACTGCTGACAGGCTCTaGAAGCCGAGGGCTGAGCCCTATAGAGCGATGGAAGGCCCTGTA +
Preference number: 5 (lower is better)
Translates to: DPAVPAKGTATADRL*KPRAEPYRAMEGPV
Trigger: TACAGGGCCTTCCATCGCTCTATAGGGCTCAGCCCTCGGCTTCCAGAGCCTGTCAGCAGTGGCCGTACCCTTCGCCGGGACTGCCGGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp GGGGCCGTCCGCCTGCCGGAATCACCTGCTCCCAATAGCCCCCGCTaGTGCTGTCAAGGCGGAAACGGAAGAGGCCAGAGGAGAAGAGGT +
Preference number: 5 (lower is better)
Translates to: GAVRLPESPAPNSPR*CCQGGNGRGQRRRG
Trigger: ACCTCTTCTCCTCTGGCCTCTTCCGTTTCCGCCTTGACAGCACCAGCGGGGGCTATTGGGAGCAGGTGATTCCGGCAGGCGGACGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp TTCACTCGCACAGAGAACCGGGCAGTGGAGGGCCGGTGTCCACCATaGACCAGCAGGGCACGGGAGGGGGCATGGAACACCATGGAGTGG +
Preference number: 5 (lower is better)
Translates to: FTRTENRAVEGRCPP*TSRAREGAWNTMEW
Trigger: CCACTCCATGGTGTTCCATGCCCCCTCCCGTGCCCTGCTGGTCCATGGTGGACACCGGCCCTCCACTGCCCGGTTCTCTGTGCGAGTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CCTGCCGAGCCATTGAGCTGGCCCTGGATCTCTACTGCATACTTGTaGTCCCGCCCAGGCAGAGGGAAGAGGCGAGCAGACCCAGGGCGC +
Preference number: 5 (lower is better)
Translates to: PAEPLSWPWISTAYL*SRPGRGKRRADPGR
Trigger: GCGCCCTGGGTCTGCTCGCCTCTTCCCTCTGCCTGGGCGGGACCACAAGTATGCAGTAGAGATCCAGGGCCAGCTCAATGGCTCGGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp AGTGTGGGCATTGCAGTTCTCAGGACACAGAGCCATGCGGCAGTGTaGGCCAGCCCAGCCCTGAGGACATCGGCAGAGCCCCGCACCTGC +
Preference number: 5 (lower is better)
Translates to: SVGIAVLRTQSHAAV*ASPALRTSAEPRTC
Trigger: GCAGGTGCGGGGCTCTGCCGATGTCCTCAGGGCTGGGCTGGCCCACACTGCCGCATGGCTCTGTGTCCTGAGAACTGCAATGCCCACACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CCCCCAAACATCCACAAGGTGGCATCGGGTCCATCCACCATGGTGTaGCCCAGGCGGTGCAGGAAGCGGCTGGCAGTGTCGGCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PPNIHKVASGPSTMV*PRRCRKRLAVSAER
Trigger: CCTCTCAGCCGACACTGCCAGCCGCTTCCTGCACCGCCTGGGCCACACCATGGTGGATGGACCCGATGCCACCTTGTGGATGTTTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CAGCGGCAGTGGTCGGGCTCCACACATGAGCCGTTCACGCAGCCCTaGGCGCACACAGGGCGGCACAGCCCTGTCATGTTGTCCATGGTA +
Preference number: 5 (lower is better)
Translates to: QRQWSGSTHEPFTQP*AHTGRHSPVMLSMV
Trigger: TACCATGGACAACATGACAGGGCTGTGCCGCCCTGTGTGCGCCCAGGGCTGCGTGAACGGCTCATGTGTGGAGCCCGACCACTGCCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp GTGGTCCCCACCACCTCTCCATCTCCAGGTTGCAGGGTCCGAGGATaGCGGGCCAGGCACTCACTGCAGGTCCGGAGACGTCGACATTCC +
Preference number: 5 (lower is better)
Translates to: VVPTTSPSPGCRVRG*RARHSLQVRRRRHS
Trigger: GGAATGTCGACGTCTCCGGACCTGCAGTGAGTGCCTGGCCCGCCATCCTCGGACCCTGCAACCTGGAGATGGAGAGGTGGTGGGGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598762.1
CDS-3UTR CAA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGGCGCACTGGCTAGAGTaGGCCAGGCAGTCCTCACAG +
Preference number: 5 (lower is better)
Translates to: RGQESKEVAQVRGGASGEAHWLE*ARQSSQ
Trigger: CTGTGAGGACTGCCTGGCCAACTCTAGCCAGTGCGC...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGTGCCCGCCATCCAGCTaGGTGGCGCAGTCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLCPPSS*VAQSGP
Trigger: GGGCCCCGACTGCGCCACCAAGCTGGATGGCGGGCA...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGACAAGGCGCACTGAGTaGCCTGAGCACAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQTRRTE*PEHSPG
Trigger: CCCTGGGCTGTGCTCAGGCAACTCAGTGCGCCTTGT...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGAGTCGTGGTGCCCGTTaGCACACTCGTCCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: RGQESKEVAQVRGGASGESRGAR*HTRPQG
Trigger: CCCCTGAGGACGAGTGTGCAAACGGGCACCACGACT...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCTCACAGTGGCTGCCCTaGGTGTGGTTGCGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGSQWLP*VWLRQS
Trigger: GCTCTGCCGCAACCACACCAAGGGCAGCCACTGTGA...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCTAGCGCCCGGCGTTaGGGCTCATGGAAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: RGQESKEVAQVRGGASGEPSARR*GSWKQL
Trigger: CAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAGG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGAGTCGGCTGAGCCGTaGGCGCCGGGCCCACTTGGG +
Preference number: 5 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVESAEP*APGPLG
Trigger: CCCAAGTGGGCCCGGCGCCAACGGCTCAGCCGACTC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 90 bp TGCCATGGCCAGAACCTTGCCCAGGGCCATCGCCGCCTCCTGCACTaGCCCTTAGAGCGGGGACAGGCCGTAAAAACCTGGAGAGGACCC +
Preference number: 5 (lower is better)
Translates to: CHGQNLAQGHRRLLH*PLERGQAVKTWRGP
Trigger: GGGTCCTCTCCAGGTTTTTACGGCCTGTCCCCGCTCTAAGGGTCAGTGCAGGAGGCGGCGATGGCCCTGGGCAAGGTTCTGGCCATGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 90 bp TTGCCCAGAACACTGGCTGTGTGGAAGGCTCGCTCCCTTGGGCCCTaGAGCCCATCCCGCCCCTTCAGCGTCGTCCACACATGCCGATCC +
Preference number: 5 (lower is better)
Translates to: LPRTLAVWKARSLGP*SPSRPFSVVHTCRS
Trigger: GGATCGGCATGTGTGGACGACGCTGAAGGGGCGGGATGGGCTTCAGGGCCCAAGGGAGCGAGCCTTCCACACAGCCAGTGTTCTGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 90 bp CGCCCCACCTCCTCCTTGTCAGGCTGGGAGGTATTGGGCGGCTGCTaGAAGGTGAGCAAGTGCAGGCCAGGCAGGAAGCTCTGGGTGACG +
Preference number: 5 (lower is better)
Translates to: RPTSSLSGWEVLGGC*KVSKCRPGRKLWVT
Trigger: CGTCACCCAGAGCTTCCTGCCTGGCCTGCACTTGCTCACCTTTCAGCAGCCGCCCAATACCTCCCAGCCTGACAAGGAGGAGGTGGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334370.8
CDS TCA 90 bp GATGAGGCGGTAGCACTGCTGGCCGCCCAGCGGACTCCCGTGAAATaGTTCCCGGCACTTGGCGCATTGGTGCACTTCCCGTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: DEAVALLAAQRTPVK*FPALGALVHFPSRR
Trigger: CCTCCTGGACGGGAAGTGCACCAATGCGCCAAGTGCCGGGAATCATTTCACGGGAGTCCGCTGGGCGGCCAGCAGTGCTACCGCCTCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS GCA 90 bp GCACTCACGTTGTGCCACCACCCAGCCCCCTGGTTCTCCCACAGGTaGAGGTCACAGGCACGTCCCAAGAAGCCAGGCTCACAGCGGCAT +
Preference number: 5 (lower is better)
Translates to: ALTLCHHPAPWFSHR*RSQARPKKPGSQRH
Trigger: ATGCCGCTGTGAGCCTGGCTTCTTGGGACGTGCCTGTGACCTGCACCTGTGGGAGAACCAGGGGGCTGGGTGGTGGCACAACGTGAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp GCCGTCCGCCTGCCGGAATCACCTGCTCCCAATAGCCCCCGCTGGTaGTGTCAAGGCGGAAACGGAAGAGGCCAGAGGAGAAGAGGTCGT +
Preference number: 5 (lower is better)
Translates to: AVRLPESPAPNSPRW*CQGGNGRGQRRRGR
Trigger: ACGACCTCTTCTCCTCTGGCCTCTTCCGTTTCCGCCTTGACAGCACCAGCGGGGGCTATTGGGAGCAGGTGATTCCGGCAGGCGGACGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp TTCCTGCCCCAGTGTGGGCATTGCAGTTCTCAGGACACAGAGCCATaGGGCAGTGTGGGCCAGCCCAGCCCTGAGGACATCGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: FLPQCGHCSSQDTEP*GSVGQPSPEDIGRA
Trigger: GGCTCTGCCGATGTCCTCAGGGCTGGGCTGGCCCACACTGCCGCATGGCTCTGTGTCCTGAGAACTGCAATGCCCACACTGGGGCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp CAGCGCATTCACTGTGGCGGTTGCAGCGGCATTCCGTGGAGCAGTTaGGGCCCACAAAGCCAAAGTGGCAGCGGCAGTGGTCGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: QRIHCGGCSGIPWSS*GPQSQSGSGSGRAP
Trigger: TGGAGCCCGACCACTGCCGCTGCCACTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAATGCCGCTGCAACCGCCACAGTGAATGCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp GGCATTGTTGAGGTCCTGGCCTCCGAAAACTGCCAGCAGCCCTGGTaGGGACAGGAAGGCGCCAGCTGCCCCAATACGGGCAGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: GIVEVLASENCQQPW*GQEGASCPNTGREG
Trigger: GCCTTCTCTGCCCGTATTGGGGCAGCTGGCGCCTTCCTGTCCCCACCAGGGCTGCTGGCAGTTTTCGGAGGCCAGGACCTCAACAATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGGAAGGCTCGCTCCCTaGGGCCCTGAAGCCCATCCC +
Preference number: 5 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVGRLAP*GPEAHP
Trigger: GGGATGGGCTTCAGGGCCCAAGGGAGCGAGCCTTCC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCGTCCCAGTGTGGGGTaGTCCTCATTGCCACACCAG +
Preference number: 5 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGRPSVG*SSLPHQ
Trigger: CTGGTGTGGCAATGAGGACAACCCCACACTGGGACG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTAAGCCAGGGCCCCGCTaGCGGCAGTGGCTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAKPGPR*RQWLWK
Trigger: CTTCCACAGCCACTGCCGCAAGCGGGGCCCTGGCTT...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGGGTCCCCGTGCCCGTaGCACTGGCAGGGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: PKSHEIREPRLLVPALPHGSPCP*HWQGRQ
Trigger: CTGCCGGCCCTGCCAGTGCAACGGGCACGGGGACCC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCTGGCGCCGGGCCCACTaGGGTCTCCCACGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIWRRAH*GLPRPA
Trigger: TGCTGGGCGTGGGAGACCCAAGTGGGCCCGGCGCCA...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACCCAGGCAGGCGCCGTaGGGTGCATGGGGCCCGCCA +
Preference number: 5 (lower is better)
Translates to: LPHPLEASQCFSLSEAILPRQAP*GAWGPP
Trigger: TGGCGGGCCCCATGCACCCAACGGCGCCTGCCTGGG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS TCA 90 bp CCTCAGCCCCTGGTCCACCTGGCCCTCCAGGCAGCATTGGGTAGATaGAGCCACGGTAGACCAGGGACACATCTGTCTCTGCGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: PQPLVHLALQAALGR*SHGRPGTHLSLRWV
Trigger: CACCCAGCGCAGAGACAGATGTGTCCCTGGTCTACCGTGGCTTCATCTACCCAATGCTGCCTGGAGGGCCAGGTGGACCAGGGGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS TCA 90 bp CCCACAGCAGAGTTAGCTCGCTGTGCCCAGGGCCTGCCGAGCCATTaGGCTGGCCCTGGATCTCTACTGCATACTTGTGGTCCCGCCCAG +
Preference number: 5 (lower is better)
Translates to: PTAELARCAQGLPSH*AGPGSLLHTCGPAQ
Trigger: CTGGGCGGGACCACAAGTATGCAGTAGAGATCCAGGGCCAGCTCAATGGCTCGGCAGGCCCTGGGCACAGCGAGCTAACTCTGCTGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CTGAGGAAGCTTCGATGGGCGGAGGTCGGGTGCTCCCACTTAGACTaGCAAGCAGCGGCCCTCGCGGGGAGTCACCGTCATACACGAACA +
Preference number: 5 (lower is better)
Translates to: LRKLRWAEVGCSHLD*QAAALAGSHRHTRT
Trigger: TGTTCGTGTATGACGGTGACTCCCCGCGAGGGCCGCTGCTTGCCAGTCTAAGTGGGAGCACCCGACCTCCGCCCATCGAAGCTTCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp GGCCACGTCCTCAGCCCCTGGTCCACCTGGCCCTCCAGGCAGCATTaGGTAGATGAAGCCACGGTAGACCAGGGACACATCTGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: GHVLSPWSTWPSRQH*VDEATVDQGHICLC
Trigger: GCAGAGACAGATGTGTCCCTGGTCTACCGTGGCTTCATCTACCCAATGCTGCCTGGAGGGCCAGGTGGACCAGGGGCTGAGGACGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS CCA 90 bp GTTAGCTCGCTGTGCCCAGGGCCTGCCGAGCCATTGAGCTGGCCCTaGATCTCTACTGCATACTTGTGGTCCCGCCCAGGCAGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: VSSLCPGPAEPLSWP*ISTAYLWSRPGRGK
Trigger: CTTCCCTCTGCCTGGGCGGGACCACAAGTATGCAGTAGAGATCCAGGGCCAGCTCAATGGCTCGGCAGGCCCTGGGCACAGCGAGCTAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp TGGCTCCGAGTGTACACTGTCGTCCCAGCCTCGACAGCCCCCGTGTaGGTACCGGGCCAAGTAGGCAGCAAACAGGAAGCAGGTGTGGGT +
Preference number: 5 (lower is better)
Translates to: WLRVYTVVPASTAPV*VPGQVGSKQEAGVG
Trigger: ACCCACACCTGCTTCCTGTTTGCTGCCTACTTGGCCCGGTACCCACACGGGGGCTGTCGAGGCTGGGACGACAGTGTACACTCGGAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp TTGCAGCGGCATTCCGTGGAGCAGTTGCGGCCCACAAAGCCAAAGTaGCAGCGGCAGTGGTCGGGCTCCACACATGAGCCGTTCACGCAG +
Preference number: 5 (lower is better)
Translates to: LQRHSVEQLRPTKPK*QRQWSGSTHEPFTQ
Trigger: CTGCGTGAACGGCTCATGTGTGGAGCCCGACCACTGCCGCTGCCACTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAATGCCGCTGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CCCCAACACCAGCGCATTCACTGTGGCGGTTGCAGCGGCATTCCGTaGAGCAGTTGCGGCCCACAAAGCCAAAGTGGCAGCGGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: PQHQRIHCGGCSGIP*SSCGPQSQSGSGSG
Trigger: ACCACTGCCGCTGCCACTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAATGCCGCTGCAACCGCCACAGTGAATGCGCTGGTGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CAGAGCAAGCAGTGGTCACGCGCCCCAACACCAGCGCATTCACTGTaGCGGTTGCAGCGGCATTCCGTGGAGCAGTTGCGGCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: QSKQWSRAPTPAHSL*RLQRHSVEQLRPTK
Trigger: CTTTGTGGGCCGCAACTGCTCCACGGAATGCCGCTGCAACCGCCACAGTGAATGCGCTGGTGTTGGGGCGCGTGACCACTGCTTGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGTCCCTGGCACTCACGTaGTGCCACCACCCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLSLALT*CHHPAP
Trigger: GGGGGCTGGGTGGTGGCACAACGTGAGTGCCAGGGA...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGTCACCCAGGGCATTGTaGAGGTCCTGGCCTCCGAAA +
Preference number: 5 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQSPRAL*RSWPPK
Trigger: TTTCGGAGGCCAGGACCTCAACAATGCCCTGGGTGA...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTAAGGCCCACACGTCGTaGGTGAGCGAGCCGTCAGCC +
Preference number: 5 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSKAHTS*VSEPSA
Trigger: GGCTGACGGCTCGCTCACCAACGACGTGTGGGCCTT...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGAAGGCCCACACGTCGTaGGTGAGCGAGCCGTCAGCC +
Preference number: 5 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVKAHTS*VSEPSA
Trigger: GGCTGACGGCTCGCTCACCAACGACGTGTGGGCCTT...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGGGAAGGCTCGCTCCCTaGGGCCCTGAAGCCCATCCC +
Preference number: 5 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSGRLAP*GPEAHP
Trigger: GGGATGGGCTTCAGGGCCCAAGGGAGCGAGCCTTCC...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGGGAGGCAGCTCTCATaGTGCACGCACCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAGRQLS*CTHQPR
Trigger: CCTGGGCTGGTGCGTGCACAATGAGAGCTGCCTCCC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGGCCAGGCCCGGCTCTaGCAGCCCCGCCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHGQARL*QPRHLE
Trigger: CTCCAGGTGGCGGGGCTGCAAGAGCCGGGCCTGGCC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACTGCCCGCCATCCAGCTaGGTGGCGCAGTCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: PKSHEIREPRLLVPALPHCPPSS*VAQSGP
Trigger: GGGCCCCGACTGCGCCACCAAGCTGGATGGCGGGCA...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGTGCAGGGTGGTGAGGTaGAGGACCCAGAAATCACGG +
Preference number: 5 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQCRVVR*RTQKSR
Trigger: CCGTGATTTCTGGGTCCTCAACCTCACCACCCTGCA...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCGCGTCCACATGCACTaGCCCTCCCGCGTGCACTGC +
Preference number: 5 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVRVHMH*PSRVHC
Trigger: GCAGTGCACGCGGGAGGGCAAGTGCATGTGGACGCG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACCTAGCGCCCGGCGTTaGGGCTCATGGAAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASPSARR*GSWKQL
Trigger: CAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAGG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTGAGTCGGCTGAGCCGTaGGCGCCGGGCCCACTTGGG +
Preference number: 5 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPESAEP*APGPLG
Trigger: CCCAAGTGGGCCCGGCGCCAACGGCTCAGCCGACTC...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCAAGCAGACGGTGACCTaGGCGAAGGGGCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: MSEGHAGEVVLAQQSLPAKQTVT*AKGRLA
Trigger: GGCCAGCCGCCCCTTCGCCAAGGTCACCGTCTGCTT...GGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CAA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTCCGGCACTTGGCGCATaGGTGCACTTCCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSPALGA*VHFPSR
Trigger: CCTGGACGGGAAGTGCACCAATGCGCCAAGTGCCGG...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378073.5
ENST00000593647.1
CDS TCA 90 bp CGCTGCTCGGCCCTCAGGGGTTCCTGGCGGGGCAAGCTCAGCTCCTaGCACCCATTGATGGCAGCCAAGGTGGTAGAAGAAGATGCCATC +
Preference number: 5 (lower is better)
Translates to: RCSALRGSWRGKLSS*HPLMAAKVVEEDAI
Trigger: GATGGCATCTTCTTCTACCACCTTGGCTGCCATCAATGGGTGTCAGGAGCTGAGCTTGCCCCGCCAGGAACCCCTGAGGGCCGAGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp CTGCTCGCAGTCAGCAGCCCCGCACGCAGCCTCGGAGCAGTTCCCTaGCCAGAAGACCTCTCGCTGGTTGATCCGACAGTCATTCTCAGA +
Preference number: 5 (lower is better)
Translates to: LLAVSSPARSLGAVP*PEDLSLVDPTVILR
Trigger: TCTGAGAATGACTGTCGGATCAACCAGCGAGAGGTCTTCTGGGCAGGGAACTGCTCCGAGGCTGCGTGCGGGGCTGCTGACTGCGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp AGCAGTGGTCACGCGCCCCAACACCAGCGCATTCACTGTGGCGGTTaGAGCGGCATTCCGTGGAGCAGTTGCGGCCCACAAAGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: SSGHAPQHQRIHCGG*SGIPWSSCGPQSQS
Trigger: ACTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAATGCCGCTGCAACCGCCACAGTGAATGCGCTGGTGTTGGGGCGCGTGACCACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp AGCAGAGTTAGCTCGCTGTGCCCAGGGCCTGCCGAGCCATTGAGCTaGCCCTGGATCTCTACTGCATACTTGTGGTCCCGCCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: SRVSSLCPGPAEPLS*PWISTAYLWSRPGR
Trigger: TCTGCCTGGGCGGGACCACAAGTATGCAGTAGAGATCCAGGGCCAGCTCAATGGCTCGGCAGGCCCTGGGCACAGCGAGCTAACTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp TCCCGTCGCTGGCCGCAGAAGGCAGCTATGAGGCTGCGGTCCGACTaGACAACACCAGTGTCCAGGAAGCGTGGGAATCCATCAAACGCC +
Preference number: 5 (lower is better)
Translates to: SRRWPQKAAMRLRSD*TTPVSRKRGNPSNA
Trigger: GGCGTTTGATGGATTCCCACGCTTCCTGGACACTGGTGTTGTCCAGTCGGACCGCAGCCTCATAGCTGCCTTCTGCGGCCAGCGACGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp GGGGGAGCTGCCCTGGCATGTGCCCGTCTCTGTGTTATTCTGACATaGACAGCCCGTCCCATCCTGCTCGTTACATGTGTCCGCGTGGCC +
Preference number: 5 (lower is better)
Translates to: GGAALACARLCVILT*TARPILLVTCVRVA
Trigger: GGCCACGCGGACACATGTAACGAGCAGGATGGGACGGGCTGTCCATGTCAGAATAACACAGAGACGGGCACATGCCAGGGCAGCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CAA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGATCTCTACTGCATACTaGTGGTCCCGCCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: RGQESKEVAQVRGGASGEISTAY*WSRPGR
Trigger: TCTGCCTGGGCGGGACCACAAGTATGCAGTAGAGAT...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGTCCAAGCACGTGCGGTaGCAGTGTGAGATGCCATCA +
Preference number: 5 (lower is better)
Translates to: RGQESKEVAQVRGGASGESKHVR*QCEMPS
Trigger: TGATGGCATCTCACACTGCAACCGCACGTGCTTGGA...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGCCACTGAGGACACGTaGGTGAGGAGGGCGCGACCC +
Preference number: 5 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIATEDT*VRRARP
Trigger: GGGTCGCGCCCTCCTCACCAACGTGTCCTCAGTGGC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCAATTCTGCGTCTCGTaGCAGTCGTGGTGCCCGTTT +
Preference number: 5 (lower is better)
Translates to: RGQESKEVAQVRGGASGEQFCVS*QSWCPF
Trigger: AAACGGGCACCACGACTGCAACGAGACGCAGAATTG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCATTACACTGGCATTaGGTGCACTTCCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RGQESKEVAQVRGGASGEPLHWH*VHFPSR
Trigger: CCTGGACGGGAAGTGCACCAAATGCCAGTGTAATGG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CAA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGAGTCGGCTGAGCCGTaGGCGCCGGGCCCACTTGGG +
Preference number: 5 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHESAEP*APGPLG
Trigger: CCCAAGTGGGCCCGGCGCCAACGGCTCAGCCGACTC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGGGCGGCTGGCCATCTaGGTCATCTCCTGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVGRLAI*VISCKC
Trigger: GCACTTGCAGGAGATGACCAAGATGGCCAGCCGCCC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGGGCGGCTGGCCATCTaGGTCATCTCCTGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAGRLAI*VISCKC
Trigger: GCACTTGCAGGAGATGACCAAGATGGCCAGCCGCCC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTAAGCAGACGGTGACCTaGGCGAAGGGGCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPKQTVT*AKGRLA
Trigger: GGCCAGCCGCCCCTTCGCCAAGGTCACCGTCTGCTT...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCTGGGGTTTCACCATATaGGCCAGGCTGGTCACGAAC +
Preference number: 5 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGWGFTI*ARLVTN
Trigger: GTTCGTGACCAGCCTGGCCAATATGGTGAAACCCCA...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTTCCCTGCTGCCCCTCTaGTCCCTCCGGTCCATTCTC +
Preference number: 5 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSSLLPL*SLRSIL
Trigger: GAGAATGGACCGGAGGGACAAGAGGGGCAGCAGGGA...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 90 bp CTGCCCGTGGCTCTGGCAGCCACCCGGGCACAGGGAGAAGCGGAATaGGGCGTTAAAGCCCAGCAGGTTGTAGTTGGCATCACTGAAGAG +
Preference number: 5 (lower is better)
Translates to: LPVALAATRAQGEAE*GVKAQQVVVGITEE
Trigger: CTCTTCAGTGATGCCAACTACAACCTGCTGGGCTTTAACGCCTCATTCCGCTTCTCCCTGTGCCCGGGTGGCTGCCAGAGCCACGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp CAAGGCGGAAACGGAAGAGGCCAGAGGAGAAGAGGTCGTGCGGGGTaGGGCCTCCAGACACATATAGCCAGACATCATCCACCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: QGGNGRGQRRRGRAG*GLQTHIARHHPPGQ
Trigger: CTGCCCTGGTGGATGATGTCTGGCTATATGTGTCTGGAGGCCGCACCCCGCACGACCTCTTCTCCTCTGGCCTCTTCCGTTTCCGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp AGTGTGGGGTTGTCCTCATTGCCACACCAGCCACACTCGTGGCTCTaGAGACACTCATGGCAGGTCAGGAAGCCATCGCAGCTCCGGCAC +
Preference number: 5 (lower is better)
Translates to: SVGLSSLPHQPHSWL*RHSWQVRKPSQLRH
Trigger: GTGCCGGAGCTGCGATGGCTTCCTGACCTGCCATGAGTGTCTGCAGAGCCACGAGTGTGGCTGGTGTGGCAATGAGGACAACCCCACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp AGAAGTCCCCCTGTAGGCACCGTCCCAGTGTGGGGTTGTCCTCATTaGCACACCAGCCACACTCGTGGCTCTGCAGACACTCATGGCAGG +
Preference number: 5 (lower is better)
Translates to: RSPPVGTVPVWGCPH*HTSHTRGSADTHGR
Trigger: CCTGCCATGAGTGTCTGCAGAGCCACGAGTGTGGCTGGTGTGGCAATGAGGACAACCCCACACTGGGACGGTGCCTACAGGGGGACTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp ACACACCCAGGCTCTGGTTACAAGTTCCTGCCCCAGTGTGGGCATTaGAGTTCTCAGGACACAGAGCCATGCGGCAGTGTGGGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: THPGSGYKFLPQCGH*SSQDTEPCGSVGQP
Trigger: GGGCTGGCCCACACTGCCGCATGGCTCTGTGTCCTGAGAACTGCAATGCCCACACTGGGGCAGGAACTTGTAACCAGAGCCTGGGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CCTTCAGCGTCGTCCACACATGCCGATCCACGTGGAAAAGCTCAGTaGAGTTCACTCGCACAGAGAACCGGGCAGTGGAGGGCCGGTGTC +
Preference number: 5 (lower is better)
Translates to: PSASSTHADPRGKAQ*SSLAQRTGQWRAGV
Trigger: GACACCGGCCCTCCACTGCCCGGTTCTCTGTGCGAGTGAACTCCACTGAGCTTTTCCACGTGGATCGGCATGTGTGGACGACGCTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CCGCACGCAGCCTCGGAGCAGTTCCCTGCCCAGAAGACCTCTCGCTaGTTGATCCGACAGTCATTCTCAGAGGTGCAGGACCCATTGCGT +
Preference number: 5 (lower is better)
Translates to: PHAASEQFPAQKTSR*LIRQSFSEVQDPLR
Trigger: ACGCAATGGGTCCTGCACCTCTGAGAATGACTGTCGGATCAACCAGCGAGAGGTCTTCTGGGCAGGGAACTGCTCCGAGGCTGCGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CCCGGCACTTGGCGCACTGGTACTTGTAGCAGTCTCGACGGTCACTaGGGGAGCTGCCCTGGCATGTGCCCGTCTCTGTGTTATTCTGAC +
Preference number: 5 (lower is better)
Translates to: PGTWRTGTCSSLDGH*GSCPGMCPSLCYSD
Trigger: GTCAGAATAACACAGAGACGGGCACATGCCAGGGCAGCTCCCCCAGTGACCGTCGAGACTGCTACAAGTACCAGTGCGCCAAGTGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CAA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTACAGACCCAATCCCTTaGCTCACCCACCCTCGCCTC +
Preference number: 5 (lower is better)
Translates to: SEPDSLIASTLLQPTIPATDPIP*LTHPRL
Trigger: GAGGCGAGGGTGGGTGAGCAAAGGGATTGGGTCTGT...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTAAGGCCCACACGTCGTaGGTGAGCGAGCCGTCAGCC +
Preference number: 5 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPKAHTS*VSEPSA
Trigger: GGCTGACGGCTCGCTCACCAACGACGTGTGGGCCTT...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGGAAGGCTCGCTCCCTaGGGCCCTGAAGCCCATCCC +
Preference number: 5 (lower is better)
Translates to: PKSHEIREPRLLVPALPHGRLAP*GPEAHP
Trigger: GGGATGGGCTTCAGGGCCCAAGGGAGCGAGCCTTCC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTAGCTTGGCAGGCTCCTaGGCACCAACTGCATTCCGG +
Preference number: 5 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSSLAGS*APTAFR
Trigger: CCGGAATGCAGTTGGTGCCAAGGAGCCTGCCAAGCT...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTAGCTTGGCAGGCTCCTaGGCACCAACTGCATTCCGG +
Preference number: 5 (lower is better)
Translates to: SEPDSLIASTLLQPTIPASLAGS*APTAFR
Trigger: CCGGAATGCAGTTGGTGCCAAGGAGCCTGCCAAGCT...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAGGGAGGCAGCTCTCATaGTGCACGCACCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGGRQLS*CTHQPR
Trigger: CCTGGGCTGGTGCGTGCACAATGAGAGCTGCCTCCC...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTCGTCCCAGTGTGGGGTaGTCCTCATTGCCACACCAG +
Preference number: 5 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSRPSVG*SSLPHQ
Trigger: CTGGTGTGGCAATGAGGACAACCCCACACTGGGACG...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCTAGAGCCTGTGGCGTaGCCGAAGCTGCCGGGCCGG +
Preference number: 5 (lower is better)
Translates to: ACGVCACALIVSLHQNLSLEPVA*PKLPGR
Trigger: CCGGCCCGGCAGCTTCGGCAACGCCACAGGCTCTAG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACAGAGCCCACTGAGGTaGTCGCAGTGGCCACGGCGT +
Preference number: 5 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGQSPLR*SQWPRR
Trigger: ACGCCGTGGCCACTGCGACAACCTCAGTGGGCTCTG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCACTGAGGACACGTaGGTGAGGAGGGCGCGACCC +
Preference number: 5 (lower is better)
Translates to: PKSHEIREPRLLVPALPHATEDT*VRRARP
Trigger: GGGTCGCGCCCTCCTCACCAACGTGTCCTCAGTGGC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCAGGATGAGGAGCCATaGGCCTCCCAGTGCAGCACG +
Preference number: 5 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSQDEEP*ASQCST
Trigger: CGTGCTGCACTGGGAGGCCAATGGCTCCTCATCCTG...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCAGGATGAGGAGCCATaGGCCTCCCAGTGCAGCACG +
Preference number: 5 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVQDEEP*ASQCST
Trigger: CGTGCTGCACTGGGAGGCCAATGGCTCCTCATCCTG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGGAGCCCACCGAAGCATaGAAGCCCCAGGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVEPTEA*KPQDEE
Trigger: CTCCTCATCCTGGGGCTTCAATGCTTCGGTGGGCTC...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCGTCCACATGCACTaGCCCTCCCGCGTGCACTGC +
Preference number: 5 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPRVHMH*PSRVHC
Trigger: GCAGTGCACGCGGGAGGGCAAGTGCATGTGGACGCG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGACAAGGCGCACTGAGTaGCCTGAGCACAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVTRRTE*PEHSPG
Trigger: CCCTGGGCTGTGCTCAGGCAACTCAGTGCGCCTTGT...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAAGTCGTGGTGCCCGTTaGCACACTCGTCCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPSRGAR*HTRPQG
Trigger: CCCCTGAGGACGAGTGTGCAAACGGGCACCACGACT...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACATTCCGTGGAGCAGTaGCGGCCCACAAAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASHSVEQ*RPTKPK
Trigger: CTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAATG...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACAAGCAGACGGTGACCTaGGCGAAGGGGCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PKSHEIREPRLLVPALPHKQTVT*AKGRLA
Trigger: GGCCAGCCGCCCCTTCGCCAAGGTCACCGTCTGCTT...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS TCA 90 bp CGGACAATTGAGACCTTGTCAGGCTGGGAGGTATTGGGCGGCTGCTaGAAGGTGAGCAAGTGCAGGCCAGGCAGGAAGCTCTGGGTGACG +
Preference number: 5 (lower is better)
Translates to: RTIETLSGWEVLGGC*KVSKCRPGRKLWVT
Trigger: CGTCACCCAGAGCTTCCTGCCTGGCCTGCACTTGCTCACCTTTCAGCAGCCGCCCAATACCTCCCAGCCTGACAAGGTCTCAATTGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS TCA 90 bp GTGATGATTCCACCGGCATGGGGGACACATTCAGCAGAGAGTGGCTaGAGCACGTCCAGTCATAGGTGGGCTGCACGGAGAGGATGCGGC +
Preference number: 5 (lower is better)
Translates to: VMIPPAWGTHSAESG*STSSHRWAARRGCG
Trigger: GCCGCATCCTCTCCGTGCAGCCCACCTATGACTGGACGTGCTTCAGCCACTCTCTGCTGAATGTGTCCCCCATGCCGGTGGAATCATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp GTGCTGTCAAGGCGGAAACGGAAGAGGCCAGAGGAGAAGAGGTCGTaGGGGGTGCGGCCTCCAGACACATATAGCCAGACATCATCCACC +
Preference number: 5 (lower is better)
Translates to: VLSRRKRKRPEEKRS*GVRPPDTYSQTSST
Trigger: GGTGGATGATGTCTGGCTATATGTGTCTGGAGGCCGCACCCCGCACGACCTCTTCTCCTCTGGCCTCTTCCGTTTCCGCCTTGACAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp TATGAGGCTGCGGTCCGACTGGACAACACCAGTGTCCAGGAAGCGTaGGAATCCATCAAACGCCAGGACGTAGCTCAGCGTGCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: YEAAVRLDNTSVQEA*ESIKRQDVAQRAGG
Trigger: ACCCCCTGCACGCTGAGCTACGTCCTGGCGTTTGATGGATTCCCACGCTTCCTGGACACTGGTGTTGTCCAGTCGGACCGCAGCCTCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp TCCTTCCTGGAGATGCAGATGTGGCTATTTCCACGACAAAAGGCGTaGCAGGGCCGGCAGGTCCCGCCTCCGACAGCTGAACCCACAAAC +
Preference number: 5 (lower is better)
Translates to: SFLEMQMWLFPRQKA*QGRQVPPPTAEPTN
Trigger: GTTTGTGGGTTCAGCTGTCGGAGGCGGGACCTGCCGGCCCTGCCACGCCTTTTGTCGTGGAAATAGCCACATCTGCATCTCCAGGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAATCCCTGGCACTCACGTaGTGCCACCACCCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: SPVPPGASDGSLGKGESQSLALT*CHHPAP
Trigger: GGGGGCTGGGTGGTGGCACAACGTGAGTGCCAGGGA...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGGGAGGCAGCTCTCATaGTGCACGCACCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PKSHEIREPRLLVPALPHGRQLS*CTHQPR
Trigger: CCTGGGCTGGTGCGTGCACAATGAGAGCTGCCTCCC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCGCGCACTGGCTAGAGTaGGCCAGGCAGTCCTCACAG +
Preference number: 5 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIAHWLE*ARQSSQ
Trigger: CTGTGAGGACTGCCTGGCCAACTCTAGCCAGTGCGC...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGGTGGGGTTGTCCTCATaGCCACACCAGCCACACTCG +
Preference number: 5 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVVGLSS*PHQPHS
Trigger: CGAGTGTGGCTGGTGTGGCAATGAGGACAACCCCAC...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAAAGCCAGGGCCCCGCTaGCGGCAGTGGCTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: SPVPPGASDGSLGKGESQKPGPR*RQWLWK
Trigger: CTTCCACAGCCACTGCCGCAAGCGGGGCCCTGGCTT...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTACACCCAGGTGCCGGTaGCCAGCTGGTACTCCAGCA +
Preference number: 5 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPTPRCR*PAGTPA
Trigger: TGCTGGAGTACCAGCTGGCAACCGGCACCTGGGTGT...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGTCATACGATCTCGCTTaGCCCCCTGAGAAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVSYDLA*PPEKGP
Trigger: TGGCCCCTTCTCAGGGGGCAAAGCGAGATCGTATGA...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCCTCTCCATCTCCAGGTaGCAGGGTCCGAGGATGGCG +
Preference number: 5 (lower is better)
Translates to: LRVPSVSFQLLPSPALSILSISR*QGPRMA
Trigger: CGCCATCCTCGGACCCTGCAACCTGGAGATGGAGAG...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGCACCTTCGGGGCAGTaGGTACACCACTTACAGCGG +
Preference number: 5 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPAPSGQ*VHHLQR
Trigger: CCGCTGTAAGTGGTGTACCAACTGCCCCGAAGGTGC...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTGAGGTGCAGGACCCATaGCGTCCAATGCAAGCACCT +
Preference number: 5 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAEVQDP*RPMQAP
Trigger: AGGTGCTTGCATTGGACGCAATGGGTCCTGCACCTC...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCAGAAGACCTCTCGCTGGTaGATCCGACAGTCATTCTCA +
Preference number: 5 (lower is better)
Translates to: GGSGAGWRLRRAQKSSRQKTSRW*IRQSFS
Trigger: TGAGAATGACTGTCGGATCAACCAGCGAGAGGTCTT...CTGCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCGCGTCCACATGCACTaGCCCTCCCGCGTGCACTGC +
Preference number: 5 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHRVHMH*PSRVHC
Trigger: GCAGTGCACGCGGGAGGGCAAGTGCATGTGGACGCG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGTCTCCCCTGTCCTCTaGAACTGCCGCGTCCACATG +
Preference number: 5 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPVSPVL*NCRVHM
Trigger: CATGTGGACGCGGCAGTTCAAGAGGACAGGGGAGAC...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGACTGCCCTTGGTGTGGTaGCGGCAGAGCAAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGLPLVW*RQSKQW
Trigger: CCACTGCTTGCTCTGCCGCAACCACACCAAGGGCAG...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCTGCCCTTGGTGTGGTaGCGGCAGAGCAAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLLPLVW*RQSKQW
Trigger: CCACTGCTTGCTCTGCCGCAACCACACCAAGGGCAG...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CAA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTAGGCGGATGTCCACGTaGGTGAATTTGGGCTGCACG +
Preference number: 5 (lower is better)
Translates to: SEPDSLIASTLLQPTIPARRMST*VNLGCT
Trigger: CGTGCAGCCCAAATTCACCAACGTGGACATCCGCCT...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGGGCGGCTGGCCATCTaGGTCATCTCCTGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPGRLAI*VISCKC
Trigger: GCACTTGCAGGAGATGACCAAGATGGCCAGCCGCCC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGTCTCAGGCAGAGGTTTaGTCCCCTCTGAGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLSQAEV*SPLRLP
Trigger: GGGGAGCCTCAGAGGGGACAAAACCTCTGCCTGAGA...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp AGAGGACAGGAGTCCAAGGAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCTAGTGATGGAAGTCTaGGGAAAGGAGAGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: RGQESKEVAQVRGGASGELVMEV*GKESPK
Trigger: CTTGGGACTCTCCTTTCCCAAGACTTCCATCACTAG...CTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTCCTTGGACTCCTGTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCCTAGTGATGGAAGTCTaGGGAAAGGAGAGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGLVMEV*GKESPK
Trigger: CTTGGGACTCTCCTTTCCCAAGACTTCCATCACTAG...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCGCCCCACCTCCTCCTaGTCAGGCTGGGAGGTATTG +
Preference number: 5 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPRPTSS*SGWEVL
Trigger: CAATACCTCCCAGCCTGACAAGGAGGAGGTGGGGCG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334370.8
CDS-3UTR CAA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCCGGCACTTGGCGCATaGGTGCACTTCCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PKSHEIREPRLLVPALPHPALGA*VHFPSR
Trigger: CCTGGACGGGAAGTGCACCAATGCGCCAAGTGCCGG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378073.5
ENST00000593647.1
CDS TCA 90 bp CACGGTAGACCAGGGACACATCTGTCTCTGCGCTGGGTGTTAGGGTaGTGGTCGTGCTGCGGACAATTGAGACCTTGTCAGGCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: HGRPGTHLSLRWVLG*WSCCGQLRPCQAGR
Trigger: CCTCCCAGCCTGACAAGGTCTCAATTGTCCGCAGCACGACCATCACCCTAACACCCAGCGCAGAGACAGATGTGTCCCTGGTCTACCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS TCA 90 bp ACGCAGCCTCGGAGCAGTTCCCTGCCCAGAAGACCTCTCGCTGGTTaGTCCGACAGTCATTCTCAGAGGTGCAGGACCCATTGCGTCCAA +
Preference number: 5 (lower is better)
Translates to: TQPRSSSLPRRPLAG*SDSHSQRCRTHCVQ
Trigger: TTGGACGCAATGGGTCCTGCACCTCTGAGAATGACTGTCGGATCAACCAGCGAGAGGTCTTCTGGGCAGGGAACTGCTCCGAGGCTGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp GGCACAGCCCTGTCATGTTGTCCATGGTATAGCCGGTCTTGCAGCTaGACTCATAGCCGTGGGGCTGGTCGTGGCAATTCTGCGTCTCGT +
Preference number: 5 (lower is better)
Translates to: GTALSCCPWYSRSCS*THSRGAGRGNSASR
Trigger: ACGAGACGCAGAATTGCCACGACCAGCCCCACGGCTATGAGTGCAGCTGCAAGACCGGCTATACCATGGACAACATGACAGGGCTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp ACTTGTAGCAGTCTCGACGGTCACTGGGGGAGCTGCCCTGGCATGTaGCCGTCTCTGTGTTATTCTGACATGGACAGCCCGTCCCATCCT +
Preference number: 5 (lower is better)
Translates to: TCSSLDGHWGSCPGM*PSLCYSDMDSPSHP
Trigger: AGGATGGGACGGGCTGTCCATGTCAGAATAACACAGAGACGGGCACATGCCAGGGCAGCTCCCCCAGTGACCGTCGAGACTGCTACAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS GCA 90 bp TGGCGCACTGGTACTTGTAGCAGTCTCGACGGTCACTGGGGGAGCTaGCCTGGCATGTGCCCGTCTCTGTGTTATTCTGACATGGACAGC +
Preference number: 5 (lower is better)
Translates to: WRTGTCSSLDGHWGS*PGMCPSLCYSDMDS
Trigger: GCTGTCCATGTCAGAATAACACAGAGACGGGCACATGCCAGGGCAGCTCCCCCAGTGACCGTCGAGACTGCTACAAGTACCAGTGCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS CCA 90 bp CTGCTGACAGGCTCTGGAAGCCGAGGGCTGAGCCCTATAGAGCGATaGAAGGCCCTGTATATGGAGTCATTATGGACGGGGCCGAACCCT +
Preference number: 5 (lower is better)
Translates to: LLTGSGSRGLSPIER*KALYMESLWTGPNP
Trigger: AGGGTTCGGCCCCGTCCATAATGACTCCATATACAGGGCCTTCCATCGCTCTATAGGGCTCAGCCCTCGGCTTCCAGAGCCTGTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp TGTGCACATTGCCCCCATAGACCACCATGTAATTGCCCAGAACACTaGCTGTGTGGAAGGCTCGCTCCCTTGGGCCCTGAAGCCCATCCC +
Preference number: 5 (lower is better)
Translates to: CAHCPHRPPCNCPEH*LCGRLAPLGPEAHP
Trigger: GGGATGGGCTTCAGGGCCCAAGGGAGCGAGCCTTCCACACAGCCAGTGTTCTGGGCAATTACATGGTGGTCTATGGGGGCAATGTGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp AACTGCATTCCGGGTCCCGGGAGCAGACGCTGTGGTCTGTGTACATaGAGCAGTAGTCCAAGTGGTAGTCAGGGGCAGGTGCCTGGAACA +
Preference number: 5 (lower is better)
Translates to: NCIPGPGSRRCGLCT*SSSPSGSQGQVPGT
Trigger: TGTTCCAGGCACCTGCCCCTGACTACCACTTGGACTACTGCTCCATGTACACAGACCACAGCGTCTGCTCCCGGGACCCGGAATGCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp CAGATGCACACACCCAGGCTCTGGTTACAAGTTCCTGCCCCAGTGTaGGCATTGCAGTTCTCAGGACACAGAGCCATGCGGCAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: QMHTPRLWLQVPAPV*ALQFSGHRAMRQCG
Trigger: CCCACACTGCCGCATGGCTCTGTGTCCTGAGAACTGCAATGCCCACACTGGGGCAGGAACTTGTAACCAGAGCCTGGGTGTGTGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTATCTCTACTGCATACTaGTGGTCCCGCCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSISTAY*WSRPGR
Trigger: TCTGCCTGGGCGGGACCACAAGTATGCAGTAGAGAT...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGTGGGGTTGTCCTCATaGCCACACCAGCCACACTCG +
Preference number: 5 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIVGLSS*PHQPHS
Trigger: CGAGTGTGGCTGGTGTGGCAATGAGGACAACCCCAC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCGTCCCAGTGTGGGGTaGTCCTCATTGCCACACCAG +
Preference number: 5 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIRPSVG*SSLPHQ
Trigger: CTGGTGTGGCAATGAGGACAACCCCACACTGGGACG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGAGCCCACCGAAGCATaGAAGCCCCAGGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIEPTEA*KPQDEE
Trigger: CTCCTCATCCTGGGGCTTCAATGCTTCGGTGGGCTC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGTCATACGATCTCGCTTaGCCCCCTGAGAAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLSYDLA*PPEKGP
Trigger: TGGCCCCTTCTCAGGGGGCAAAGCGAGATCGTATGA...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCTCTCCATCTCCAGGTaGCAGGGTCCGAGGATGGCG +
Preference number: 5 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPLSISR*QGPRMA
Trigger: CGCCATCCTCGGACCCTGCAACCTGGAGATGGAGAG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCGCACCTTCGGGGCAGTaGGTACACCACTTACAGCGG +
Preference number: 5 (lower is better)
Translates to: LRVPSVSFQLLPSPALSIAPSGQ*VHHLQR
Trigger: CCGCTGTAAGTGGTGTACCAACTGCCCCGAAGGTGC...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTAGTCGTGGTGCCCGTTaGCACACTCGTCCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPSRGAR*HTRPQG
Trigger: CCCCTGAGGACGAGTGTGCAAACGGGCACCACGACT...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGCAATTCTGCGTCTCGTaGCAGTCGTGGTGCCCGTTT +
Preference number: 5 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVQFCVS*QSWCPF
Trigger: AAACGGGCACCACGACTGCAACGAGACGCAGAATTG...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCACATTCCGTGGAGCAGTaGCGGCCCACAAAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPHSVEQ*RPTKPK
Trigger: CTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAATG...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CTGGGCATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCATTCACTGTGGCGGTaGCAGCGGCATTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: LGMSEGHAGEVVLAQQSLHSLWR*QRHSVE
Trigger: CTCCACGGAATGCCGCTGCAACCGCCACAGTGAATG...AAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACATGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CAA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTGCCCTTGGTGTGGTaGCGGCAGAGCAAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LPHPLEASQCFSLSEAILLPLVW*RQSKQW
Trigger: CCACTGCTTGCTCTGCCGCAACCACACCAAGGGCAG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp CCCACCCCAGGGCCTCTGCCTTTGCTTCCCAAAGCTCTTCCCGTAGCTGGTTCTCCATTACACTGGCATTaGGTGCACTTCCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PTPGPLPLLPKALPVAGSPLHWH*VHFPSR
Trigger: CCTGGACGGGAAGTGCACCAAATGCCAGTGTAATGG...AGAACCAGCTACGGGAAGAGCTTTGGGAAGCAAAGGCAGAGGCCCTGGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS-3UTR CAA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGTCCACGTTGGTGAATTaGGGCTGCACGCCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVSTLVN*GCTPKR
Trigger: CCTCTTTGGCGTGCAGCCCAAATTCACCAACGTGGA...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACTGGCGCCGGGCCCACTaGGGTCTCCCACGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHWRRAH*GLPRPA
Trigger: TGCTGGGCGTGGGAGACCCAAGTGGGCCCGGCGCCA...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTTGGGGTTTCACCATATaGGCCAGGCTGGTCACGAAC +
Preference number: 5 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAWGFTI*ARLVTN
Trigger: GTTCGTGACCAGCCTGGCCAATATGGTGAAACCCCA...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTTCCCTGCTGCCCCTCTaGTCCCTCCGGTCCATTCTC +
Preference number: 5 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPSLLPL*SLRSIL
Trigger: GAGAATGGACCGGAGGGACAAGAGGGGCAGCAGGGA...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGTCTGACATGCACGCATaGGCTAGGGCCTCTCACACT +
Preference number: 5 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVSDMHA*ARASHT
Trigger: AGTGTGAGAGGCCCTAGCCAATGCGTGCATGTCAGA...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp GCCCTCGCGGGGAGTCACCGTCATACACGAACAGGTAGTCATACGTaGACTCTGTGTCCAGGAAAAGGAAGTCCAGCAGGATCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: ALAGSHRHTRTGSHT*TLCPGKGSPAGSGA
Trigger: AGCACCGGATCCTGCTGGACTTCCTTTTCCTGGACACAGAGTGCACGTATGACTACCTGTTCGTGTATGACGGTGACTCCCCGCGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTACAGACCCAATCCCTTaGCTCACCCACCCTCGCCTC +
Preference number: 5 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPTDPIP*LTHPRL
Trigger: GAGGCGAGGGTGGGTGAGCAAAGGGATTGGGTCTGT...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGAGGTGCAGCAGCATCTaGCCTGAGGAAGCTTCGATG +
Preference number: 5 (lower is better)
Translates to: SPLGCLRVPSVSFQLLPSRCSSI*PEEASM
Trigger: CATCGAAGCTTCCTCAGGCAAGATGCTGCTGCACCT...CGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCTGAGCCAGACTCCCTCATTGCCAGCACCCTACTCCAGCCCACCATCCCTGCTCAAGACTCCCAGGTGTaGGCGGAGAAGTTGTATAGG +
Preference number: 5 (lower is better)
Translates to: SEPDSLIASTLLQPTIPAQDSQV*AEKLYR
Trigger: CCTATACAACTTCTCCGCCAACACCTGGGAGTCTTG...AGCAGGGATGGTGGGCTGGAGTAGGGTGCTGGCAATGAGGGAGTCTGGCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCCTCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCATCCAAGCACGTGCGGTaGCAGTGTGAGATGCCATCA +
Preference number: 5 (lower is better)
Translates to: ASHTEAPREGKMQSPVPPSKHVR*QCEMPS
Trigger: TGATGGCATCTCACACTGCAACCGCACGTGCTTGGA...TGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGAGCCCACCGAAGCATaGAAGCCCCAGGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: PKSHEIREPRLLVPALPHEPTEA*KPQDEE
Trigger: CTCCTCATCCTGGGGCTTCAATGCTTCGGTGGGCTC...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCTGCAGGGTGGTGAGGTaGAGGACCCAGAAATCACGG +
Preference number: 5 (lower is better)
Translates to: LRVPSVSFQLLPSPALSICRVVR*RTQKSR
Trigger: CCGTGATTTCTGGGTCCTCAACCTCACCACCCTGCA...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCTGCAGGGTGGTGAGGTaGAGGACCCAGAAATCACGG +
Preference number: 5 (lower is better)
Translates to: QAALSGTGLCTDGTGIFICRVVR*RTQKSR
Trigger: CCGTGATTTCTGGGTCCTCAACCTCACCACCCTGCA...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCTCATACGATCTCGCTTaGCCCCCTGAGAAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LRVPSVSFQLLPSPALSISYDLA*PPEKGP
Trigger: TGGCCCCTTCTCAGGGGGCAAAGCGAGATCGTATGA...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCTCTCCATCTCCAGGTaGCAGGGTCCGAGGATGGCG +
Preference number: 5 (lower is better)
Translates to: ACGVCACALIVSLHQNLSLSISR*QGPRMA
Trigger: CGCCATCCTCGGACCCTGCAACCTGGAGATGGAGAG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCCCAGCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCAAAGACCTCTCGCTGGTaGATCCGACAGTCATTCTCA +
Preference number: 5 (lower is better)
Translates to: AQLTSPHRPSLPHPLEASKTSRW*IRQSFS
Trigger: TGAGAATGACTGTCGGATCAACCAGCGAGAGGTCTT...TGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACACAAGGCGCACTGAGTaGCCTGAGCACAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHTRRTE*PEHSPG
Trigger: CCCTGGGCTGTGCTCAGGCAACTCAGTGCGCCTTGT...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GAGGTGGCTCAGGTGCGGGGTGGCGCCTCAGGAGAGCCCAGAAATCTTCCAGGCTTCTTTGGCTCTCCCTaGGACATTTGTAACTCCTTC +
Preference number: 5 (lower is better)
Translates to: EVAQVRGGASGEPRNLPGFFGSP*DICNSF
Trigger: GAAGGAGTTACAAATGTCCAAGGGAGAGCCAAAGAA...GCCTGGAAGATTTCTGGGCTCTCCTGAGGCGCCACCCCGCACCTGAGCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGTCCACGTTGGTGAATTaGGGCTGCACGCCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLSTLVN*GCTPKR
Trigger: CCTCTTTGGCGTGCAGCCCAAATTCACCAACGTGGA...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAAGGCGGATGTCCACGTaGGTGAATTTGGGCTGCACG +
Preference number: 5 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGRRMST*VNLGCT
Trigger: CGTGCAGCCCAAATTCACCAACGTGGACATCCGCCT...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ATGTCAGAGGGACATGCTGGTGAGGTTGTCCTGGCTCAACAGTCCCTTCCGGCCTGGGGTTTCACCATATaGGCCAGGCTGGTCACGAAC +
Preference number: 5 (lower is better)
Translates to: MSEGHAGEVVLAQQSLPAWGFTI*ARLVTN
Trigger: GTTCGTGACCAGCCTGGCCAATATGGTGAAACCCCA...GGCCGGAAGGGACTGTTGAGCCAGGACAACCTCACCAGCATGTCCCTCTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CAA 90 bp ACCACCACTGAGCTTTATCCCTGCAGCCTGGGGGTCCTATTCACCTCTGGGCTGTCTGACATGCACGCATaGGCTAGGGCCTCTCACACT +
Preference number: 5 (lower is better)
Translates to: TTTELYPCSLGVLFTSGLSDMHA*ARASHT
Trigger: AGTGTGAGAGGCCCTAGCCAATGCGTGCATGTCAGA...CAGCCCAGAGGTGAATAGGACCCCCAGGCTGCAGGGATAAAGCTCAGTGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTTCACCCAGGGCATTGTaGAGGTCCTGGCCTCCGAAA +
Preference number: 5 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPSPRAL*RSWPPK
Trigger: TTTCGGAGGCCAGGACCTCAACAATGCCCTGGGTGA...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTATCACCCAGGGCATTGTaGAGGTCCTGGCCTCCGAAA +
Preference number: 5 (lower is better)
Translates to: LPHPLEASQCFSLSEAILSPRAL*RSWPPK
Trigger: TTTCGGAGGCCAGGACCTCAACAATGCCCTGGGTGA...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAGTGTTGGCGGAGAAGTaGTATAGGACGAGGTCACCC +
Preference number: 5 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGVLAEK*YRTRSP
Trigger: GGGTGACCTCGTCCTATACAACTTCTCCGCCAACAC...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTGTGTTGGCGGAGAAGTaGTATAGGACGAGGTCACCC +
Preference number: 5 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPVLAEK*YRTRSP
Trigger: GGGTGACCTCGTCCTATACAACTTCTCCGCCAACAC...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAAGCTTGGCAGGCTCCTaGGCACCAACTGCATTCCGG +
Preference number: 5 (lower is better)
Translates to: SPVPPGASDGSLGKGESQSLAGS*APTAFR
Trigger: CCGGAATGCAGTTGGTGCCAAGGAGCCTGCCAAGCT...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGTGGGGTTGTCCTCATaGCCACACCAGCCACACTCG +
Preference number: 5 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHVGLSS*PHQPHS
Trigger: CGAGTGTGGCTGGTGTGGCAATGAGGACAACCCCAC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGATCCAAGCACGTGCGGTaGCAGTGTGAGATGCCATCA +
Preference number: 5 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGSKHVR*QCEMPS
Trigger: TGATGGCATCTCACACTGCAACCGCACGTGCTTGGA...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAAAGCCAGGGCCCCGCTaGCGGCAGTGGCTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: CACALIVSLHQNLSPMRSKPGPR*RQWLWK
Trigger: CTTCCACAGCCACTGCCGCAAGCGGGGCCCTGGCTT...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCTAGAGCCTGTGGCGTaGCCGAAGCTGCCGGGCCGG +
Preference number: 5 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSLEPVA*PKLPGR
Trigger: CCGGCCCGGCAGCTTCGGCAACGCCACAGGCTCTAG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCAGAGCCCACTGAGGTaGTCGCAGTGGCCACGGCGT +
Preference number: 5 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIQSPLR*SQWPRR
Trigger: ACGCCGTGGCCACTGCGACAACCTCAGTGGGCTCTG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTGCACCTTCGGGGCAGTaGGTACACCACTTACAGCGG +
Preference number: 5 (lower is better)
Translates to: ACGVCACALIVSLHQNLSAPSGQ*VHHLQR
Trigger: CCGCTGTAAGTGGTGTACCAACTGCCCCGAAGGTGC...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGAAGACCTCTCGCTGGTaGATCCGACAGTCATTCTCA +
Preference number: 5 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVKTSRW*IRQSFS
Trigger: TGAGAATGACTGTCGGATCAACCAGCGAGAGGTCTT...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAGTCTCCCCTGTCCTCTaGAACTGCCGCGTCCACATG +
Preference number: 5 (lower is better)
Translates to: SPVPPGASDGSLGKGESQVSPVL*NCRVHM
Trigger: CATGTGGACGCGGCAGTTCAAGAGGACAGGGGAGAC...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACGTCTCCCCTGTCCTCTaGAACTGCCGCGTCCACATG +
Preference number: 5 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHVSPVL*NCRVHM
Trigger: CATGTGGACGCGGCAGTTCAAGAGGACAGGGGAGAC...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACATTCACTGTGGCGGTaGCAGCGGCATTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: SPVPPGASDGSLGKGESQHSLWR*QRHSVE
Trigger: CTCCACGGAATGCCGCTGCAACCGCCACAGTGAATG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCATTCACTGTGGCGGTaGCAGCGGCATTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: ACGVCACALIVSLHQNLSHSLWR*QRHSVE
Trigger: CTCCACGGAATGCCGCTGCAACCGCCACAGTGAATG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp CTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCGCCAGCGCTATCAATCTCCACGTTGGTGAATTaGGGCTGCACGCCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: LRVPSVSFQLLPSPALSISTLVN*GCTPKR
Trigger: CCTCTTTGGCGTGCAGCCCAAATTCACCAACGTGGA...GATTGATAGCGCTGGCGAGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTAGGCGGATGTCCACGTaGGTGAATTTGGGCTGCACG +
Preference number: 5 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPRRMST*VNLGCT
Trigger: CGTGCAGCCCAAATTCACCAACGTGGACATCCGCCT...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTTCTGTTGTTCCAGCTTaGCTGTGTGACCCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPSVVPA*LCDPGP
Trigger: GGGACCAGGGTCACACAGCAAAGCTGGAACAACAGA...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCACAACACGCCTCTGTaGTTCCAGCTTTGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVHNTPL*FQLCCV
Trigger: CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAATCTCAGGCAGAGGTTTaGTCCCCTCTGAGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: SPVPPGASDGSLGKGESQSQAEV*SPLRLP
Trigger: GGGGAGCCTCAGAGGGGACAAAACCTCTGCCTGAGA...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TCTCACACTGAGGCTCCACGCGAAGGGAAGATGCAAAGTCCAGTCCCTCCAGGAAATGATTCCCGGCACTaGGCGCATTGGTGCACTTCC +
Preference number: 5 (lower is better)
Translates to: SHTEAPREGKMQSPVPPGNDSRH*AHWCTS
Trigger: GGAAGTGCACCAATGCGCCAAGTGCCGGGAATCATT...TCCTGGAGGGACTGGACTTTGCATCTTCCCTTCGCGTGGAGCCTCAGTGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378073.5
CDS-3UTR CAA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTAGGTGCAGCAGCATCTaGCCTGAGGAAGCTTCGATG +
Preference number: 5 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPRCSSI*PEEASM
Trigger: CATCGAAGCTTCCTCAGGCAAGATGCTGCTGCACCT...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCTCCCTGGCACTCACGTaGTGCCACCACCCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSSLALT*CHHPAP
Trigger: GGGGGCTGGGTGGTGGCACAACGTGAGTGCCAGGGA...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CAGGCAGCACTGTCTGGAACAGGGCTGTGCACTGACGGTACCGGCATTTTCATCCGGACAATTGAGACCTaGTCAGGCTGGGAGGTATTG +
Preference number: 5 (lower is better)
Translates to: QAALSGTGLCTDGTGIFIRTIET*SGWEVL
Trigger: CAATACCTCCCAGCCTGACAAGGTCTCAATTGTCCG...GATGAAAATGCCGGTACCGTCAGTGCACAGCCCTGTTCCAGACAGTGCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR CAA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAATCGTGCTGCGGACAATaGAGACCTTGTCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SPVPPGASDGSLGKGESQSCCGQ*RPCQAG
Trigger: CCCAGCCTGACAAGGTCTCAATTGTCCGCAGCACGA...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR CAA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACATCTCTACTGCATACTaGTGGTCCCGCCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: PKSHEIREPRLLVPALPHISTAY*WSRPGR
Trigger: TCTGCCTGGGCGGGACCACAAGTATGCAGTAGAGAT...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAAGAGGTGCAGGACCCATaGCGTCCAATGCAAGCACCT +
Preference number: 5 (lower is better)
Translates to: SPVPPGASDGSLGKGESQEVQDP*RPMQAP
Trigger: AGGTGCTTGCATTGGACGCAATGGGTCCTGCACCTC...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CTGCCACATCCTCTGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACAATTCTGCGTCTCGTaGCAGTCGTGGTGCCCGTTT +
Preference number: 5 (lower is better)
Translates to: LPHPLEASQCFSLSEAILQFCVS*QSWCPF
Trigger: AAACGGGCACCACGACTGCAACGAGACGCAGAATTG...TAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCAGAGGATGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGCCAGTGAGTACTTCTTaGGCTCTCCCTTGGACATTT +
Preference number: 5 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVPVSTS*ALPWTF
Trigger: AAATGTCCAAGGGAGAGCCAAAGAAGTACTCACTGG...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp GCTGACTTCACCCCATCGTCCCTCACTGCCACATCCTCTGGAGGCCTCACAGTGCTGAAGCCATCTTACTaGTGTGTGCACATGTGCATG +
Preference number: 5 (lower is better)
Translates to: ADFTPSSLTATSSGGLTVLKPSY*CVHMCM
Trigger: CATGCACATGTGCACACACAAGTAAGATGGCTTCAG...CACTGTGAGGCCTCCAGAGGATGTGGCAGTGAGGGACGATGGGGTGAAGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCTCCCTGCTGCCCCTCTaGTCCCTCCGGTCCATTCTC +
Preference number: 5 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEISLLPL*SLRSIL
Trigger: GAGAATGGACCGGAGGGACAAGAGGGGCAGCAGGGA...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACAGGTGCAGCAGCATCTaGCCTGAGGAAGCTTCGATG +
Preference number: 5 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHRCSSI*PEEASM
Trigger: CATCGAAGCTTCCTCAGGCAAGATGCTGCTGCACCT...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTGTGTTGGCGGAGAAGTaGTATAGGACGAGGTCACCC +
Preference number: 5 (lower is better)
Translates to: ACGVCACALIVSLHQNLSVLAEK*YRTRSP
Trigger: GGGTGACCTCGTCCTATACAACTTCTCCGCCAACAC...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp ATTCACCTCTGGGCTGTCTCAGGGTGCCATCTGTCTCTTTCCAGCTGCTTCCCTCAAGACTCCCAGGTGTaGGCGGAGAAGTTGTATAGG +
Preference number: 5 (lower is better)
Translates to: IHLWAVSGCHLSLSSCFPQDSQV*AEKLYR
Trigger: CCTATACAACTTCTCCGCCAACACCTGGGAGTCTTG...AGGGAAGCAGCTGGAAAGAGACAGATGGCACCCTGAGACAGCCCAGAGGTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACGCGCACTGGCTAGAGTaGGCCAGGCAGTCCTCACAG +
Preference number: 5 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHAHWLE*ARQSSQ
Trigger: CTGTGAGGACTGCCTGGCCAACTCTAGCCAGTGCGC...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAACACCCAGGTGCCGGTaGCCAGCTGGTACTCCAGCA +
Preference number: 5 (lower is better)
Translates to: CACALIVSLHQNLSPMRSTPRCR*PAGTPA
Trigger: TGCTGGAGTACCAGCTGGCAACCGGCACCTGGGTGT...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACACACCCAGGTGCCGGTaGCCAGCTGGTACTCCAGCA +
Preference number: 5 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHTPRCR*PAGTPA
Trigger: TGCTGGAGTACCAGCTGGCAACCGGCACCTGGGTGT...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCCATTCACTGTGGCGGTaGCAGCGGCATTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: VCMCTDCLPSPEPKSHEIHSLWR*QRHSVE
Trigger: CTCCACGGAATGCCGCTGCAACCGCCACAGTGAATG...GATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACTCACAGTGGCTGCCCTaGGTGTGGTTGCGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHSQWLP*VWLRQS
Trigger: GCTCTGCCGCAACCACACCAAGGGCAGCCACTGTGA...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp ACGGCCCCGAAGGTCACGTCCAGCGTCAGGCGGATGTCCACGTTGGTGAATTTGTTCTTTGGCTCTCCCTaGGACATTTGTAACTCCTTC +
Preference number: 5 (lower is better)
Translates to: TAPKVTSSVRRMSTLVNLFFGSP*DICNSF
Trigger: GAAGGAGTTACAAATGTCCAAGGGAGAGCCAAAGAA...CAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTCGGGGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593647.1
CDS-3UTR CAA 90 bp TCCCCTCTGAGGCTCCCCCACAACACGCCTCTGTTGTTCCAGCTTTGCTGTGTGCCAGTGAGTACTTCTTaGGCTCTCCCTTGGACATTT +
Preference number: 5 (lower is better)
Translates to: SPLRLPHNTPLLFQLCCVPVSTS*ALPWTF
Trigger: AAATGTCCAAGGGAGAGCCAAAGAAGTACTCACTGG...CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTGGGGGAGCCTCAGAGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACTGGGGTTTCACCATATaGGCCAGGCTGGTCACGAAC +
Preference number: 5 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHWGFTI*ARLVTN
Trigger: GTTCGTGACCAGCCTGGCCAATATGGTGAAACCCCA...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACTCTGTTGTTCCAGCTTaGCTGTGTGACCCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHSVVPA*LCDPGP
Trigger: GGGACCAGGGTCACACAGCAAAGCTGGAACAACAGA...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp CCTAAGTCCCATGAGATCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACCACAACACGCCTCTGTaGTTCCAGCTTTGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: PKSHEIREPRLLVPALPHHNTPL*FQLCCV
Trigger: CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTG...GTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGATCTCATGGGACTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 90 bp ACGGCCTCGTCTTCACTAGGACCCTCTGTCACCCAGTTTTCAATCTaGCCAAGGAAGGACAGTGTGATCATAGAAAGGCCTGGACCAACC +
Preference number: 5 (lower is better)
Translates to: TASSSLGPSVTQFSI*PRKDSVIIERPGPT
Trigger: GGTTGGTCCAGGCCTTTCTATGATCACACTGTCCTTCCTTGGCCAGATTGAAAACTGGGTGACAGAGGGTCCTAGTGAAGACGAGGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599787.1
CDS-3UTR CAA 90 bp AGTCCAGTCCCTCCAGGAGCTAGTGATGGAAGTCTTGGGAAAGGAGAGTCCCAACAAGACTCCCAGGTGTaGGCGGAGAAGTTGTATAGG +
Preference number: 5 (lower is better)
Translates to: SPVPPGASDGSLGKGESQQDSQV*AEKLYR
Trigger: CCTATACAACTTCTCCGCCAACACCTGGGAGTCTTG...TTGGGACTCTCCTTTCCCAAGACTTCCATCACTAGCTCCTGGAGGGACTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCGGACAATTGAGACCTaGTCAGGCTGGGAGGTATTG +
Preference number: 5 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHRTIET*SGWEVL
Trigger: CAATACCTCCCAGCCTGACAAGGTCTCAATTGTCCG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR CAA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCTGCCCTTGGTGTGGTaGCGGCAGAGCAAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSLPLVW*RQSKQW
Trigger: CCACTGCTTGCTCTGCCGCAACCACACCAAGGGCAG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCTCACAGTGGCTGCCCTaGGTGTGGTTGCGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSSQWLP*VWLRQS
Trigger: GCTCTGCCGCAACCACACCAAGGGCAGCCACTGTGA...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACAAAGCAGACGGTGACCTaGGCGAAGGGGCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTKQTVT*AKGRLA
Trigger: GGCCAGCCGCCCCTTCGCCAAGGTCACCGTCTGCTT...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp TCAGGGAACCTCGTCTCTTGGTTCCTGCTTTGCCCCACGCCTATGACAGTGCCTCTGAAGCCATCTTACTaGTGTGTGCACATGTGCATG +
Preference number: 5 (lower is better)
Translates to: SGNLVSWFLLCPTPMTVPLKPSY*CVHMCM
Trigger: CATGCACATGTGCACACACAAGTAAGATGGCTTCAG...AGGCACTGTCATAGGCGTGGGGCAAAGCAGGAACCAAGAGACGAGGTTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCATCGTGCTGCGGACAATaGAGACCTTGTCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: CACALIVSLHQNLSPMRSSCCGQ*RPCQAG
Trigger: CCCAGCCTGACAAGGTCTCAATTGTCCGCAGCACGA...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS-3UTR CAA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACATTCCGTGGAGCAGTaGCGGCCCACAAAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: CACALIVSLHQNLSPMRSHSVEQ*RPTKPK
Trigger: CTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAATG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp GCGTGTGGGGTGTGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCTAGTGATGGAAGTCTaGGGAAAGGAGAGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: ACGVCACALIVSLHQNLSLVMEV*GKESPK
Trigger: CTTGGGACTCTCCTTTCCCAAGACTTCCATCACTAG...ACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACACACCCCACACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 90 bp CAGCTCCTGACACCCATTGATGGCAGCCAAGGTGGTAGAAGAAGATaGCATCTTCGTAGCACTTTTCCTCCTGGTAATGGGTGTGCACAT +
Preference number: 5 (lower is better)
Translates to: QLLTPIDGSQGGRRR*HLRSTFPPGNGCAH
Trigger: ATGTGCACACCCATTACCAGGAGGAAAAGTGCTACGAAGATGGCATCTTCTTCTACCACCTTGGCTGCCATCAATGGGTGTCAGGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACATCACAGTGGCTGCCCTaGGTGTGGTTGCGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTSQWLP*VWLRQS
Trigger: GCTCTGCCGCAACCACACCAAGGGCAGCCACTGTGA...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACCCAGTGAGTACTTCTTaGGCTCTCCCTTGGACATTT +
Preference number: 5 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHPVSTS*ALPWTF
Trigger: AAATGTCCAAGGGAGAGCCAAAGAAGTACTCACTGG...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp TTCTTAAATAGGTACATCGGATCCTGTCACTCCCCTTCATCAAACCATCCAACACCTAGCGCCCGGCGTTaGGGCTCATGGAAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: FLNRYIGSCHSPSSNHPTPSARR*GSWKQL
Trigger: CAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAGG...TGTTGGATGGTTTGATGAAGGGGAGTGACAGGATCCGATGTACCTATTTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCAGGCGGATGTCCACGTaGGTGAATTTGGGCTGCACG +
Preference number: 5 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSRRMST*VNLGCT
Trigger: CGTGCAGCCCAAATTCACCAACGTGGACATCCGCCT...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCATCTGTTGTTCCAGCTTaGCTGTGTGACCCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: CACALIVSLHQNLSPMRSSVVPA*LCDPGP
Trigger: GGGACCAGGGTCACACAGCAAAGCTGGAACAACAGA...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCAAATGATTCCCGGCACTaGGCGCATTGGTGCACTTCC +
Preference number: 5 (lower is better)
Translates to: CACALIVSLHQNLSPMRSNDSRH*AHWCTS
Trigger: GGAAGTGCACCAATGCGCCAAGTGCCGGGAATCATT...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378073.5
ENST00000593647.1
CDS CCA 90 bp GTGAGTACTTCTTTGGCTCTCCCTTGGACATTTGTAACTCCTTCCTaGAGATGCAGATGTGGCTATTTCCACGACAAAAGGCGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: VSTSLALPWTFVTPS*RCRCGYFHDKRRGR
Trigger: CCTGCCACGCCTTTTGTCGTGGAAATAGCCACATCTGCATCTCCAGGAAGGAGTTACAAATGTCCAAGGGAGAGCCAAAGAAGTACTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp TGGAGGCCTCACAGTGCTTCTCCCTCTCTGAAGCCATCTTACTTGTGTGTGCACTTCTTTGGCTCTCCCTaGGACATTTGTAACTCCTTC +
Preference number: 5 (lower is better)
Translates to: WRPHSASPSLKPSYLCVHFFGSP*DICNSF
Trigger: GAAGGAGTTACAAATGTCCAAGGGAGAGCCAAAGAA...GTGCACACACAAGTAAGATGGCTTCAGAGAGGGAGAAGCACTGTGAGGCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACCACAACACGCCTCTGTaGTTCCAGCTTTGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHHNTPL*FQLCCV
Trigger: CACACAGCAAAGCTGGAACAACAGAGGCGTGTTGTG...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS-3UTR CAA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACCCAGTGAGTACTTCTTaGGCTCTCCCTTGGACATTT +
Preference number: 5 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHPVSTS*ALPWTF
Trigger: AAATGTCCAAGGGAGAGCCAAAGAAGTACTCACTGG...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp TGTGCATGTGCACTGATTGTCTCCCTTCACCAGAACCTAAGTCCCATGAGATCACTGAAGCCATCTTACTaGTGTGTGCACATGTGCATG +
Preference number: 5 (lower is better)
Translates to: CACALIVSLHQNLSPMRSLKPSY*CVHMCM
Trigger: CATGCACATGTGCACACACAAGTAAGATGGCTTCAG...TGATCTCATGGGACTTAGGTTCTGGTGAAGGGAGACAATCAGTGCACATGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp TGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCACTTCTTTGGCTCTCCCTaGGACATTTGTAACTCCTTC +
Preference number: 5 (lower is better)
Translates to: WVTLTSFLVLPIKQACSHFFGSP*DICNSF
Trigger: GAAGGAGTTACAAATGTCCAAGGGAGAGCCAAAGAA...GTGGGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS-3UTR CAA 90 bp ATCTGGGTCACACTTACCAGTTTTCTGGTCCTTCCAATAAAACAAGCCTGCTCCCTGAAGCCATCTTACTaGTGTGTGCACATGTGCATG +
Preference number: 5 (lower is better)
Translates to: IWVTLTSFLVLPIKQACSLKPSY*CVHMCM
Trigger: CATGCACATGTGCACACACAAGTAAGATGGCTTCAG...GGAGCAGGCTTGTTTTATTGGAAGGACCAGAAAACTGGTAAGTGTGACCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS CCA 72 bp CAGTGGCCACGGCGTGGGTCCCCGTGCCCGTTGCACTaGCAGGGCCGGCAGCCCCTAGAGCCTGTGGCGTTG +
Preference number: 6 (lower is better)
Translates to: QWPRRGSPCPLH*QGRQPLEPVAL
Trigger: CAACGCCACAGGCTCTAGGGGCTGCCGGCCCTGCCAGTGCAACGGGCACGGGGACCCACGCCGTGGCCACTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593840.1
CDS CAA 90 bp CCACTGAGGTTGTCGCAGTGGCCACGGCGTGGGTCCCCGTGCCCGTaGCACTGGCAGGGCCGGCAGCCCCTAGAGCCTGTGGCGTTGCCG +
Preference number: 6 (lower is better)
Translates to: PLRLSQWPRRGSPCP*HWQGRQPLEPVALP
Trigger: CGGCAACGCCACAGGCTCTAGGGGCTGCCGGCCCTGCCAGTGCAACGGGCACGGGGACCCACGCCGTGGCCACTGCGACAACCTCAGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593840.1
CDS CCA 72 bp TCGCAGGCACACACACCCGGTGGCTGGCACTGCCCGTaGCTCTGGCAGCCACCCGGGCACAGGGAGAAGCGG +
Preference number: 6 (lower is better)
Translates to: SQAHTPGGWHCP*LWQPPGHREKR
Trigger: CCGCTTCTCCCTGTGCCCGGGTGGCTGCCAGAGCCACGGGCAGTGCCAGCCACCGGGTGTGTGTGCCTGCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp AGCAGGGCACGGGAGGGGGCATGGAACACCATGGAGTaGCCAGTGGCAGCAGGGGGCCGTCCGCCTGCCGGA +
Preference number: 6 (lower is better)
Translates to: SRAREGAWNTME*PVAAGGRPPAG
Trigger: TCCGGCAGGCGGACGGCCCCCTGCTGCCACTGGCCACTCCATGGTGTTCCATGCCCCCTCCCGTGCCCTGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp ACCAGCAGGGACCCACCAGCCCCGTCATCCCCGCAATaGGCTCCGCCCTGGCGCAGGTGGCAGGTGGCACTG +
Preference number: 6 (lower is better)
Translates to: TSRDPPAPSSPQ*APPWRRWQVAL
Trigger: CAGTGCCACCTGCCACCTGCGCCAGGGCGGAGCCCATTGCGGGGATGACGGGGCTGGTGGGTCCCTGCTGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp ATGGCACCACGGCCAGCGGGCACATATGCGGCTGCATaGAAGGAGCGGGGCGATGGGCCTGGGCCCCCGTCC +
Preference number: 6 (lower is better)
Translates to: MAPRPAGTYAAA*KERGDGPGPPS
Trigger: GGACGGGGGCCCAGGCCCATCGCCCCGCTCCTTCCATGCAGCCGCATATGTGCCCGCTGGCCGTGGTGCCAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 72 bp CACTGGCAGGGCCGGCAGCCCCTAGAGCCTGTGGCGTaGCCGAAGCTGCCGGGCCGGCATCGTTCGCAGTGC +
Preference number: 6 (lower is better)
Translates to: HWQGRQPLEPVA*PKLPGRHRSQC
Trigger: GCACTGCGAACGATGCCGGCCCGGCAGCTTCGGCAACGCCACAGGCTCTAGGGGCTGCCGGCCCTGCCAGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593840.1
CDS CAA 72 bp TTGTCGCAGTGGCCACGGCGTGGGTCCCCGTGCCCGTaGCACTGGCAGGGCCGGCAGCCCCTAGAGCCTGTG +
Preference number: 6 (lower is better)
Translates to: LSQWPRRGSPCP*HWQGRQPLEPV
Trigger: CACAGGCTCTAGGGGCTGCCGGCCCTGCCAGTGCAACGGGCACGGGGACCCACGCCGTGGCCACTGCGACAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593840.1
CDS GCA 72 bp GAGAGGCGGCTGTCCATGAGGGTCTCCCAGACCAGCTaGCCGCCATCCAGCTTGGTGGCGCAGTCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: ERRLSMRVSQTS*PPSSLVAQSGP
Trigger: GGGCCCCGACTGCGCCACCAAGCTGGATGGCGGGCAGCTGGTCTGGGAGACCCTCATGGACAGCCGCCTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp TGCCGCGTCCACATGCACTTGCCCTCCCGCGTGCACTaGTCGCAGTCAGCAGCCCCGCACGCAGCCTCGGAG +
Preference number: 6 (lower is better)
Translates to: CRVHMHLPSRVH*SQSAAPHAASE
Trigger: CTCCGAGGCTGCGTGCGGGGCTGCTGACTGCGAGCAGTGCACGCGGGAGGGCAAGTGCATGTGGACGCGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CATAGAGGCTGCGGGCCGGGACAGGCTAGGTTCGGATaGTCCAGGAGAGACTCCTCCAGCCGGGGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: HRGCGPGQARFG*SRRDSSSRGRG
Trigger: GCCCCGCCCCCGGCTGGAGGAGTCTCTCCTGGACCATCCGAACCTAGCCTGTCCCGGCCCGCAGCCTCTATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp GTGCGGCCGGGGCCTAGCGCCCGGCGTTTGGGCTCATaGAAGCAGTTGGTCTGGGACGTGGGGTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: VRPGPSARRLGS*KQLVWDVGSRQ
Trigger: CTGCCTGGACCCCACGTCCCAGACCAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAGGCCCCGGCCGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS CAA 90 bp GTGCGGCCGGGGCCTAGCGCCCGGCGTTTGGGCTCATGGAAGCAGTaGGTCTGGGACGTGGGGTCCAGGCAGCACTCCTGCTCCACCGAG +
Preference number: 6 (lower is better)
Translates to: VRPGPSARRLGSWKQ*VWDVGSRQHSCSTE
Trigger: CTCGGTGGAGCAGGAGTGCTGCCTGGACCCCACGTCCCAGACCAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAGGCCCCGGCCGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS CAA 90 bp CCCCATGTCCAGTCCTGGCACTCGTCGCAGAAGCCAGGGCCCCGCTaGCGGCAGTGGCTGTGGAAGCTGCAGCCACAGTCCCGGGAGCAG +
Preference number: 6 (lower is better)
Translates to: PHVQSWHSSQKPGPR*RQWLWKLQPQSREQ
Trigger: CTGCTCCCGGGACTGTGGCTGCAGCTTCCACAGCCACTGCCGCAAGCGGGGCCCTGGCTTCTGCGACGAGTGCCAGGACTGGACATGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593840.1
CDS CAA 90 bp CGGCGGGTCTCCCCTGTCCTCTTGAACTGCCGCGTCCACATGCACTaGCCCTCCCGCGTGCACTGCTCGCAGTCAGCAGCCCCGCACGCA +
Preference number: 6 (lower is better)
Translates to: RRVSPVLLNCRVHMH*PSRVHCSQSAAPHA
Trigger: TGCGTGCGGGGCTGCTGACTGCGAGCAGTGCACGCGGGAGGGCAAGTGCATGTGGACGCGGCAGTTCAAGAGGACAGGGGAGACCCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 72 bp CCCGGCGTGAGCCCAGTGCCACTGAGGACACGTTGGTaGGGAGGGCGCGACCCCCACACTCCCGAAAGCAGG +
Preference number: 6 (lower is better)
Translates to: PGVSPVPLRTRW*GGRDPHTPESR
Trigger: CCTGCTTTCGGGAGTGTGGGGGTCGCGCCCTCCTCACCAACGTGTCCTCAGTGGCACTGGGCTCACGCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 72 bp GCCAAAGTGGCAGCGGCAGTGGTCGGGCTCCACACATaGGCCGTTCACGCAGCCCTGGGCGCACACAGGGCG +
Preference number: 6 (lower is better)
Translates to: AKVAAAVVGLHT*AVHAALGAHRA
Trigger: CGCCCTGTGTGCGCCCAGGGCTGCGTGAACGGCTCATGTGTGGAGCCCGACCACTGCCGCTGCCACTTTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 72 bp ACGTGGGGTCCAGGCAGCACTCCTGCTCCACCGAGATaGGGCGGTAGCACTGCTGGCCGCCCAGCGGACTCC +
Preference number: 6 (lower is better)
Translates to: TWGPGSTPAPPR*GGSTAGRPADS
Trigger: GGAGTCCGCTGGGCGGCCAGCAGTGCTACCGCCTCATCTCGGTGGAGCAGGAGTGCTGCCTGGACCCCACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS GCA 72 bp GGCATGGTCCCAGGGGCGAGGCGCAGGTGCCGTGGCTaGCACAGTAGGCTGAGCACTCCTGCAGGCCACAGT +
Preference number: 6 (lower is better)
Translates to: GMVPGARRRCRG*HSRLSTPAGHS
Trigger: ACTGTGGCCTGCAGGAGTGCTCAGCCTACTGTGGCAGCCACGGCACCTGCGCCTCGCCCCTGGGACCATGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp CATGGAGTGGCCAGTGGCAGCAGGGGGCCGTCCGCCTaGCGGAATCACCTGCTCCCAATAGCCCCCGCTGGT +
Preference number: 6 (lower is better)
Translates to: HGVASGSRGPSA*RNHLLPIAPAG
Trigger: ACCAGCGGGGGCTATTGGGAGCAGGTGATTCCGGCAGGCGGACGGCCCCCTGCTGCCACTGGCCACTCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp CGGGCCTGCTCAGGCCTAGGGAGGCAGCTCTCATTGTaGACGCACCAGCCCAGGGTGCCAGGTCCCCGTGGA +
Preference number: 6 (lower is better)
Translates to: RACSGLGRQLSL*THQPRVPGPRG
Trigger: TCCACGGGGACCTGGCACCCTGGGCTGGTGCGTGCACAATGAGAGCTGCCTCCCTAGGCCTGAGCAGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp CCCGCCGGCTGCATGCCGCGTCCCCTTTGCGGCTGGTaGTCTGATGCCACTCACAGAAGGGGTCCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: PAGCMPRPLCGW*SDATHRRGPGC
Trigger: GCACCCAGGACCCCTTCTGTGAGTGGCATCAGAGCACCAGCCGCAAAGGGGACGCGGCATGCAGCCGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp ATACATGGCACCACGGCCAGCGGGCACATATGCGGCTaGATGGAAGGAGCGGGGCGATGGGCCTGGGCCCCC +
Preference number: 6 (lower is better)
Translates to: IHGTTASGHICG*MEGAGRWAWAP
Trigger: GGGGGCCCAGGCCCATCGCCCCGCTCCTTCCATGCAGCCGCATATGTGCCCGCTGGCCGTGGTGCCATGTAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CAGGCTGCTGCAGGCCAAACGGACCTTATAGACGGGTaGGTCCCCAGGGGGCGAAGGGCTCTACGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: QAAAGQTDLIDG*VPRGRRALRPG
Trigger: GCCGGGCCGTAGAGCCCTTCGCCCCCTGGGGACCCACCCGTCTATAAGGTCCGTTTGGCCTGCAGCAGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CACGGGAGGGGGCATGGAACACCATGGAGTGGCCAGTaGCAGCAGGGGGCCGTCCGCCTGCCGGAATCACCT +
Preference number: 6 (lower is better)
Translates to: HGRGHGTPWSGQ*QQGAVRLPESP
Trigger: AGGTGATTCCGGCAGGCGGACGGCCCCCTGCTGCCACTGGCCACTCCATGGTGTTCCATGCCCCCTCCCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp GGGGTCCCAGGAGGGGGTGCAGCTTGGCAGGCTCCTTaGCACCAACTGCATTCCGGGTCCCGGGAGCAGACG +
Preference number: 6 (lower is better)
Translates to: GVPGGGAAWQAP*HQLHSGSREQT
Trigger: CGTCTGCTCCCGGGACCCGGAATGCAGTTGGTGCCAAGGAGCCTGCCAAGCTGCACCCCCTCCTGGGACCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp AATGGGCTCCGCCCTGGCGCAGGTGGCAGGTGGCACTaGTCAGGCACCAGCCACAGCCCTGGTCTGCCAAGC +
Preference number: 6 (lower is better)
Translates to: NGLRPGAGGRWH*SGTSHSPGLPS
Trigger: GCTTGGCAGACCAGGGCTGTGGCTGGTGCCTGACCAGTGCCACCTGCCACCTGCGCCAGGGCGGAGCCCATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 72 bp CAGCGGGCCTGCTCAGGCCTAGGGAGGCAGCTCTCATaGTGCACGCACCAGCCCAGGGTGCCAGGTCCCCGT +
Preference number: 6 (lower is better)
Translates to: QRACSGLGRQLS*CTHQPRVPGPR
Trigger: ACGGGGACCTGGCACCCTGGGCTGGTGCGTGCACAATGAGAGCTGCCTCCCTAGGCCTGAGCAGGCCCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 72 bp CCGACCCGGCGTGAGCCCAGTGCCACTGAGGACACGTaGGTGAGGAGGGCGCGACCCCCACACTCCCGAAAG +
Preference number: 6 (lower is better)
Translates to: PTRREPSATEDT*VRRARPPHSRK
Trigger: CTTTCGGGAGTGTGGGGGTCGCGCCCTCCTCACCAACGTGTCCTCAGTGGCACTGGGCTCACGCCGGGTCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 90 bp TGCACGCCAAAGAGGACAGTGCGGCCGGGGCCTAGCGCCCGGCGTTaGGGCTCATGGAAGCAGTTGGTCTGGGACGTGGGGTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: CTPKRTVRPGPSARR*GSWKQLVWDVGSRQ
Trigger: CTGCCTGGACCCCACGTCCCAGACCAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAGGCCCCGGCCGCACTGTCCTCTTTGGCGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS TCA 72 bp CACCCTCGGTGTGGTCCTGGCAGAAGCAGAGCCCACTaGGGTTGTCGCAGTGGCCACGGCGTGGGTCCCCGT +
Preference number: 6 (lower is better)
Translates to: HPRCGPGRSRAH*GCRSGHGVGPR
Trigger: ACGGGGACCCACGCCGTGGCCACTGCGACAACCTCAGTGGGCTCTGCTTCTGCCAGGACCACACCGAGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593840.1
CDS GCA 72 bp GGACAGCGACCCCAGCACGGCCAAGGCCAAAACCAGTaGCATGGCCAGAACCTTGCCCAGGGCCATCGCCGC +
Preference number: 6 (lower is better)
Translates to: GQRPQHGQGQNQ*HGQNLAQGHRR
Trigger: GCGGCGATGGCCCTGGGCAAGGTTCTGGCCATGGCACTGGTTTTGGCCTTGGCCGTGCTGGGGTCGCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp CAGAAGGGGTCCTGGGTGCAGGCGTGGCAGTCCCGATaGTCCTCGCAGAGTGGGCAGAGGGTAGGCACCAGC +
Preference number: 6 (lower is better)
Translates to: QKGSWVQAWQSR*SSQSGQRVGTS
Trigger: GCTGGTGCCTACCCTCTGCCCACTCTGCGAGGAGCATCGGGACTGCCACGCCTGCACCCAGGACCCCTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp GTTGCAGGGTCCGAGGATGGCGGGCCAGGCACTCACTaGAGGTCCGGAGACGTCGACATTCCTCCGGGGAGC +
Preference number: 6 (lower is better)
Translates to: VAGSEDGGPGTH*RSGDVDIPPGS
Trigger: GCTCCCCGGAGGAATGTCGACGTCTCCGGACCTGCAGTGAGTGCCTGGCCCGCCATCCTCGGACCCTGCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000598762.1
CDS CCA 72 bp GCGACCCCAGCACGGCCAAGGCCAAAACCAGTGCCATaGCCAGAACCTTGCCCAGGGCCATCGCCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: ATPARPRPKPVP*PEPCPGPSPPP
Trigger: AGGAGGCGGCGATGGCCCTGGGCAAGGTTCTGGCCATGGCACTGGTTTTGGCCTTGGCCGTGCTGGGGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp GAGGTCCTGGCCTCCGAAAACTGCCAGCAGCCCTGGTaGGGACAGGAAGGCGCCAGCTGCCCCAATACGGGC +
Preference number: 6 (lower is better)
Translates to: EVLASENCQQPW*GQEGASCPNTG
Trigger: GCCCGTATTGGGGCAGCTGGCGCCTTCCTGTCCCCACCAGGGCTGCTGGCAGTTTTCGGAGGCCAGGACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CCTGGGGCAGGCCCAGGCCCCCAAACATCCACAAGGTaGCATCGGGTCCATCCACCATGGTGTGGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: PGAGPGPQTSTR*HRVHPPWCGPG
Trigger: GCCTGGGCCACACCATGGTGGATGGACCCGATGCCACCTTGTGGATGTTTGGGGGCCTGGGCCTGCCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp AGAGGACAGTGCGGCCGGGGCCTAGCGCCCGGCGTTTaGGCTCATGGAAGCAGTTGGTCTGGGACGTGGGGT +
Preference number: 6 (lower is better)
Translates to: RGQCGRGLAPGV*AHGSSWSGTWG
Trigger: ACCCCACGTCCCAGACCAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAGGCCCCGGCCGCACTGTCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS CAA 72 bp CAGTCCTGGCACTCGTCGCAGAAGCCAGGGCCCCGCTaGCGGCAGTGGCTGTGGAAGCTGCAGCCACAGTCC +
Preference number: 6 (lower is better)
Translates to: QSWHSSQKPGPR*RQWLWKLQPQS
Trigger: GGACTGTGGCTGCAGCTTCCACAGCCACTGCCGCAAGCGGGGCCCTGGCTTCTGCGACGAGTGCCAGGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593840.1
CDS CAA 72 bp GGGCCTAGCGCCCGGCGTTTGGGCTCATGGAAGCAGTaGGTCTGGGACGTGGGGTCCAGGCAGCACTCCTGC +
Preference number: 6 (lower is better)
Translates to: GPSARRLGSWKQ*VWDVGSRQHSC
Trigger: GCAGGAGTGCTGCCTGGACCCCACGTCCCAGACCAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS CAA 72 bp AAGAGGACAGTGCGGCCGGGGCCTAGCGCCCGGCGTTaGGGCTCATGGAAGCAGTTGGTCTGGGACGTGGGG +
Preference number: 6 (lower is better)
Translates to: KRTVRPGPSARR*GSWKQLVWDVG
Trigger: CCCCACGTCCCAGACCAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAGGCCCCGGCCGCACTGTCCTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS CAA 90 bp CCCGTCTTCAGGGGTTCGGGCCTGGACCCCACAGACCCAATCCCTTaGCTCACCCACCCTCGCCTCCCTCCGAAGCCGGATGGGCCAGAT +
Preference number: 6 (lower is better)
Translates to: PVFRGSGLDPTDPIP*LTHPRLPPKPDGPD
Trigger: ATCTGGCCCATCCGGCTTCGGAGGGAGGCGAGGGTGGGTGAGCAAAGGGATTGGGTCTGTGGGGTCCAGGCCCGAACCCCTGAAGACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 72 bp GGGGCCTGTCCCGTCGCTGGCCGCAGAAGGCAGCTATaGGGCTGCGGTCCGACTGGACAACACCAGTGTCCA +
Preference number: 6 (lower is better)
Translates to: GACPVAGRRRQL*GCGPTGQHQCP
Trigger: TGGACACTGGTGTTGTCCAGTCGGACCGCAGCCTCATAGCTGCCTTCTGCGGCCAGCGACGGGACAGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp GAGGGGGTGCAGCTTGGCAGGCTCCTTGGCACCAACTaGATTCCGGGTCCCGGGAGCAGACGCTGTGGTCTG +
Preference number: 6 (lower is better)
Translates to: EGVQLGRLLGTN*IPGPGSRRCGL
Trigger: CAGACCACAGCGTCTGCTCCCGGGACCCGGAATGCAGTTGGTGCCAAGGAGCCTGCCAAGCTGCACCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp TGGCGCAGTCGGGGCCCCCGAAGCCCTCGGCACAGATaGACACACCCAGGCTCTGGTTACAAGTTCCTGCCC +
Preference number: 6 (lower is better)
Translates to: WRSRGPRSPRHR*THPGSGYKFLP
Trigger: GGGCAGGAACTTGTAACCAGAGCCTGGGTGTGTGCATCTGTGCCGAGGGCTTCGGGGGCCCCGACTGCGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp CAGCAGATACATGGCACCACGGCCAGCGGGCACATATaGGGCTGCATGGAAGGAGCGGGGCGATGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: QQIHGTTASGHI*GCMEGAGRWAW
Trigger: CCAGGCCCATCGCCCCGCTCCTTCCATGCAGCCGCATATGTGCCCGCTGGCCGTGGTGCCATGTATCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CTTCGATGGGCGGAGGTCGGGTGCTCCCACTTAGACTaGCAAGCAGCGGCCCTCGCGGGGAGTCACCGTCAT +
Preference number: 6 (lower is better)
Translates to: LRWAEVGCSHLD*QAAALAGSHRH
Trigger: ATGACGGTGACTCCCCGCGAGGGCCGCTGCTTGCCAGTCTAAGTGGGAGCACCCGACCTCCGCCCATCGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp GACGCCTCTCCATCTCCAGGTTGCAGGGTCCGAGGATaGCGGGCCAGGCACTCACTGCAGGTCCGGAGACGT +
Preference number: 6 (lower is better)
Translates to: DASPSPGCRVRG*RARHSLQVRRR
Trigger: ACGTCTCCGGACCTGCAGTGAGTGCCTGGCCCGCCATCCTCGGACCCTGCAACCTGGAGATGGAGAGGCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp TGGTCGGGCTCCACACATGAGCCGTTCACGCAGCCCTaGGCGCACACAGGGCGGCACAGCCCTGTCATGTTG +
Preference number: 6 (lower is better)
Translates to: WSGSTHEPFTQP*AHTGRHSPVML
Trigger: CAACATGACAGGGCTGTGCCGCCCTGTGTGCGCCCAGGGCTGCGTGAACGGCTCATGTGTGGAGCCCGACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp AGCGCCCGGCGTTTGGGCTCATGGAAGCAGTTGGTCTaGGACGTGGGGTCCAGGCAGCACTCCTGCTCCACC +
Preference number: 6 (lower is better)
Translates to: SARRLGSWKQLV*DVGSRQHSCST
Trigger: GGTGGAGCAGGAGTGCTGCCTGGACCCCACGTCCCAGACCAACTGCTTCCATGAGCCCAAACGCCGGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS CCA 72 bp GGCCTAGCGCCCGGCGTTTGGGCTCATGGAAGCAGTTaGTCTGGGACGTGGGGTCCAGGCAGCACTCCTGCT +
Preference number: 6 (lower is better)
Translates to: GLAPGVWAHGSS*SGTWGPGSTPA
Trigger: AGCAGGAGTGCTGCCTGGACCCCACGTCCCAGACCAACTGCTTCCATGAGCCCAAACGCCGGGCGCTAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS CCA 72 bp TTTGCTCACCCACCCTCGCCTCCCTCCGAAGCCGGATaGGCCAGATCAGAGAGACGAGGGGACGCTTGGGCC +
Preference number: 6 (lower is better)
Translates to: FAHPPSPPSEAG*ARSERRGDAWA
Trigger: GGCCCAAGCGTCCCCTCGTCTCTCTGATCTGGCCCATCCGGCTTCGGAGGGAGGCGAGGGTGGGTGAGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334370.8
ENST00000378073.5
CDS CAA 72 bp TGGCCCCTGCCCAGTGGACTGAAGGCCCACACGTCGTaGGTGAGCGAGCCGTCAGCCAGCTCACCACCCATC +
Preference number: 6 (lower is better)
Translates to: WPLPSGLKAHTS*VSEPSASSPPI
Trigger: GATGGGTGGTGAGCTGGCTGACGGCTCGCTCACCAACGACGTGTGGGCCTTCAGTCCACTGGGCAGGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 72 bp CCCCCTGACCCACAGCGGGCAGAGCCCACCGAAGCATaGAAGCCCCAGGATGAGGAGCCATTGGCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: PPDPQRAEPTEA*KPQDEEPLASQ
Trigger: CTGGGAGGCCAATGGCTCCTCATCCTGGGGCTTCAATGCTTCGGTGGGCTCTGCCCGCTGTGGGTCAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 90 bp AGCTCCCAGTGGCCCCTGCCCAGTGGACTGAAGGCCCACACGTCGTaGGTGAGCGAGCCGTCAGCCAGCTCACCACCCATCAGTACCAGG +
Preference number: 6 (lower is better)
Translates to: SSQWPLPSGLKAHTS*VSEPSASSPPISTR
Trigger: CCTGGTACTGATGGGTGGTGAGCTGGCTGACGGCTCGCTCACCAACGACGTGTGGGCCTTCAGTCCACTGGGCAGGGGCCACTGGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 90 bp GGGCCTGCCGAGCCATTGAGCTGGCCCTGGATCTCTACTGCATACTaGTGGTCCCGCCCAGGCAGAGGGAAGAGGCGAGCAGACCCAGGG +
Preference number: 6 (lower is better)
Translates to: GPAEPLSWPWISTAY*WSRPGRGKRRADPG
Trigger: CCCTGGGTCTGCTCGCCTCTTCCCTCTGCCTGGGCGGGACCACAAGTATGCAGTAGAGATCCAGGGCCAGCTCAATGGCTCGGCAGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 90 bp CCAGCGCATTCACTGTGGCGGTTGCAGCGGCATTCCGTGGAGCAGTaGCGGCCCACAAAGCCAAAGTGGCAGCGGCAGTGGTCGGGCTCC +
Preference number: 6 (lower is better)
Translates to: PAHSLWRLQRHSVEQ*RPTKPKWQRQWSGS
Trigger: GGAGCCCGACCACTGCCGCTGCCACTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAATGCCGCTGCAACCGCCACAGTGAATGCGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 90 bp CCGAAGGTCACGTCCAGCGTCAGGCGGATGTCCACGTTGGTGAATTaGGGCTGCACGCCAAAGAGGACAGTGCGGCCGGGGCCTAGCGCC +
Preference number: 6 (lower is better)
Translates to: PKVTSSVRRMSTLVN*GCTPKRTVRPGPSA
Trigger: GGCGCTAGGCCCCGGCCGCACTGTCCTCTTTGGCGTGCAGCCCAAATTCACCAACGTGGACATCCGCCTGACGCTGGACGTGACCTTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS TCA 72 bp CAACAGGACGCTGCCACCAAGCACCGCAGCTACATGTaGGTACCGACCACTGGGAGGCGCTGCTCGGCCCTC +
Preference number: 6 (lower is better)
Translates to: QQDAATKHRSYM*VPTTGRRCSAL
Trigger: GAGGGCCGAGCAGCGCCTCCCAGTGGTCGGTACTCACATGTAGCTGCGGTGCTTGGTGGCAGCGTCCTGTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 72 bp CCCCTGACCCACAGCGGGCAGAGCCCACCGAAGCATTaGAGCCCCAGGATGAGGAGCCATTGGCCTCCCAGT +
Preference number: 6 (lower is better)
Translates to: PLTHSGQSPPKH*SPRMRSHWPPS
Trigger: ACTGGGAGGCCAATGGCTCCTCATCCTGGGGCTTCAATGCTTCGGTGGGCTCTGCCCGCTGTGGGTCAGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp CGGCCAAGGCCAAAACCAGTGCCATGGCCAGAACCTTaGCCAGGGCCATCGCCGCCTCCTGCACTGACCCTT +
Preference number: 6 (lower is better)
Translates to: RPRPKPVPWPEP*PGPSPPPALTL
Trigger: AAGGGTCAGTGCAGGAGGCGGCGATGGCCCTGGGCAAGGTTCTGGCCATGGCACTGGTTTTGGCCTTGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp TCTTGCCTGAGGAAGCTTCGATGGGCGGAGGTCGGGTaGTCCCACTTAGACTGGCAAGCAGCGGCCCTCGCG +
Preference number: 6 (lower is better)
Translates to: SCLRKLRWAEVG*SHLDWQAAALA
Trigger: CGCGAGGGCCGCTGCTTGCCAGTCTAAGTGGGAGCACCCGACCTCCGCCCATCGAAGCTTCCTCAGGCAAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp ACACCAGTCCGATCCCACAGCAGAGTTAGCTCGCTGTaGCCAGGGCCTGCCGAGCCATTGAGCTGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: TPVRSHSRVSSL*PGPAEPLSWPW
Trigger: CCAGGGCCAGCTCAATGGCTCGGCAGGCCCTGGGCACAGCGAGCTAACTCTGCTGTGGGATCGGACTGGTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp GTCAGCAGCCCCGCACGCAGCCTCGGAGCAGTTCCCTaGCCAGAAGACCTCTCGCTGGTTGATCCGACAGTC +
Preference number: 6 (lower is better)
Translates to: VSSPARSLGAVP*PEDLSLVDPTV
Trigger: GACTGTCGGATCAACCAGCGAGAGGTCTTCTGGGCAGGGAACTGCTCCGAGGCTGCGTGCGGGGCTGCTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp CACGCGCCCCAACACCAGCGCATTCACTGTGGCGGTTaGAGCGGCATTCCGTGGAGCAGTTGCGGCCCACAA +
Preference number: 6 (lower is better)
Translates to: HAPQHQRIHCGG*SGIPWSSCGPQ
Trigger: TTGTGGGCCGCAACTGCTCCACGGAATGCCGCTGCAACCGCCACAGTGAATGCGCTGGTGTTGGGGCGCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CGCCTGCCGGAATCACCTGCTCCCAATAGCCCCCGCTaGTGCTGTCAAGGCGGAAACGGAAGAGGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: RLPESPAPNSPR*CCQGGNGRGQR
Trigger: CCTCTGGCCTCTTCCGTTTCCGCCTTGACAGCACCAGCGGGGGCTATTGGGAGCAGGTGATTCCGGCAGGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CTGTGCCCAGGGCCTGCCGAGCCATTGAGCTGGCCCTaGATCTCTACTGCATACTTGTGGTCCCGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: LCPGPAEPLSWP*ISTAYLWSRPG
Trigger: GCCTGGGCGGGACCACAAGTATGCAGTAGAGATCCAGGGCCAGCTCAATGGCTCGGCAGGCCCTGGGCACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp ATCCACAAGGTGGCATCGGGTCCATCCACCATGGTGTaGCCCAGGCGGTGCAGGAAGCGGCTGGCAGTGTCG +
Preference number: 6 (lower is better)
Translates to: IHKVASGPSTMV*PRRCRKRLAVS
Trigger: CGACACTGCCAGCCGCTTCCTGCACCGCCTGGGCCACACCATGGTGGATGGACCCGATGCCACCTTGTGGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CAGTTGCGGCCCACAAAGCCAAAGTGGCAGCGGCAGTaGTCGGGCTCCACACATGAGCCGTTCACGCAGCCC +
Preference number: 6 (lower is better)
Translates to: QLRPTKPKWQRQ*SGSTHEPFTQP
Trigger: GGGCTGCGTGAACGGCTCATGTGTGGAGCCCGACCACTGCCGCTGCCACTTTGGCTTTGTGGGCCGCAACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CAGTGGTCACGCGCCCCAACACCAGCGCATTCACTGTaGCGGTTGCAGCGGCATTCCGTGGAGCAGTTGCGG +
Preference number: 6 (lower is better)
Translates to: QWSRAPTPAHSL*RLQRHSVEQLR
Trigger: CCGCAACTGCTCCACGGAATGCCGCTGCAACCGCCACAGTGAATGCGCTGGTGTTGGGGCGCGTGACCACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp ACCACCTCTCCATCTCCAGGTTGCAGGGTCCGAGGATaGCGGGCCAGGCACTCACTGCAGGTCCGGAGACGT +
Preference number: 6 (lower is better)
Translates to: TTSPSPGCRVRG*RARHSLQVRRR
Trigger: ACGTCTCCGGACCTGCAGTGAGTGCCTGGCCCGCCATCCTCGGACCCTGCAACCTGGAGATGGAGAGGTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598762.1
CDS CAA 72 bp ACGGCCAAGGCCAAAACCAGTGCCATGGCCAGAACCTaGCCCAGGGCCATCGCCGCCTCCTGCACTGACCCT +
Preference number: 6 (lower is better)
Translates to: TAKAKTSAMART*PRAIAASCTDP
Trigger: AGGGTCAGTGCAGGAGGCGGCGATGGCCCTGGGCAAGGTTCTGGCCATGGCACTGGTTTTGGCCTTGGCCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 72 bp ATACGGGCAGAGAAGGCAGGGTCCCTGGCACTCACGTaGTGCCACCACCCAGCCCCCTGGTTCTCCCACAGG +
Preference number: 6 (lower is better)
Translates to: IRAEKAGSLALT*CHHPAPWFSHR
Trigger: CCTGTGGGAGAACCAGGGGGCTGGGTGGTGGCACAACGTGAGTGCCAGGGACCCTGCCTTCTCTGCCCGTAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 72 bp GGGGCCTTCTCCTGCCGCCATTGCAGGGTGGTGAGGTaGAGGACCCAGAAATCACGGGTGACGCCTCCAGCG +
Preference number: 6 (lower is better)
Translates to: GAFSCRHCRVVR*RTQKSRVTPPA
Trigger: CGCTGGAGGCGTCACCCGTGATTTCTGGGTCCTCAACCTCACCACCCTGCAATGGCGGCAGGAGAAGGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 72 bp TCCCCTGTCCTCTTGAACTGCCGCGTCCACATGCACTaGCCCTCCCGCGTGCACTGCTCGCAGTCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: SPVLLNCRVHMH*PSRVHCSQSAA
Trigger: GGCTGCTGACTGCGAGCAGTGCACGCGGGAGGGCAAGTGCATGTGGACGCGGCAGTTCAAGAGGACAGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 72 bp TCACGCGCCCCAACACCAGCGCATTCACTGTGGCGGTaGCAGCGGCATTCCGTGGAGCAGTTGCGGCCCACA +
Preference number: 6 (lower is better)
Translates to: SRAPTPAHSLWR*QRHSVEQLRPT
Trigger: TGTGGGCCGCAACTGCTCCACGGAATGCCGCTGCAACCGCCACAGTGAATGCGCTGGTGTTGGGGCGCGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 72 bp GTAGCACTGCTGGCCGCCCAGCGGACTCCCGTGAAATaGTTCCCGGCACTTGGCGCATTGGTGCACTTCCCG +
Preference number: 6 (lower is better)
Translates to: VALLAAQRTPVK*FPALGALVHFP
Trigger: CGGGAAGTGCACCAATGCGCCAAGTGCCGGGAATCATTTCACGGGAGTCCGCTGGGCGGCCAGCAGTGCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS GCA 72 bp TTGTGCCACCACCCAGCCCCCTGGTTCTCCCACAGGTaGAGGTCACAGGCACGTCCCAAGAAGCCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: LCHHPAPWFSHR*RSQARPKKPGS
Trigger: TGAGCCTGGCTTCTTGGGACGTGCCTGTGACCTGCACCTGTGGGAGAACCAGGGGGCTGGGTGGTGGCACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp CACTGTGGCGGTTGCAGCGGCATTCCGTGGAGCAGTTaGGGCCCACAAAGCCAAAGTGGCAGCGGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: HCGGCSGIPWSS*GPQSQSGSGSG
Trigger: ACCACTGCCGCTGCCACTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAATGCCGCTGCAACCGCCACAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp CCTCCGACAGCTGAACCCACAAACAGCGGGAGGCACTaGTCACAGTGGCTGCCCTTGGTGTGGTTGCGGCAG +
Preference number: 6 (lower is better)
Translates to: PPTAEPTNSGRH*SQWLPLVWLRQ
Trigger: CTGCCGCAACCACACCAAGGGCAGCCACTGTGAGCAGTGCCTCCCGCTGTTTGTGGGTTCAGCTGTCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS GCA 72 bp AGCGTCAGGCGGATGTCCACGTTGGTGAATTTGGGCTaGACGCCAAAGAGGACAGTGCGGCCGGGGCCTAGC +
Preference number: 6 (lower is better)
Translates to: SVRRMSTLVNLG*TPKRTVRPGPS
Trigger: GCTAGGCCCCGGCCGCACTGTCCTCTTTGGCGTGCAGCCCAAATTCACCAACGTGGACATCCGCCTGACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
ENST00000599787.1
CDS CCA 72 bp GTCCCGGCGAAGGGTACGGCCACTGCTGACAGGCTCTaGAAGCCGAGGGCTGAGCCCTATAGAGCGATGGAA +
Preference number: 6 (lower is better)
Translates to: VPAKGTATADRL*KPRAEPYRAME
Trigger: TTCCATCGCTCTATAGGGCTCAGCCCTCGGCTTCCAGAGCCTGTCAGCAGTGGCCGTACCCTTCGCCGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp ATGGCAGGTCAGGAAGCCATCGCAGCTCCGGCACCGTaGCTCCGAGTGTACACTGTCGTCCCAGCCTCGACA +
Preference number: 6 (lower is better)
Translates to: MAGQEAIAAPAP*LRVYTVVPAST
Trigger: TGTCGAGGCTGGGACGACAGTGTACACTCGGAGCCACGGTGCCGGAGCTGCGATGGCTTCCTGACCTGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CCACACCAGCCACACTCGTGGCTCTGCAGACACTCATaGCAGGTCAGGAAGCCATCGCAGCTCCGGCACCGT +
Preference number: 6 (lower is better)
Translates to: PHQPHSWLCRHS*QVRKPSQLRHR
Trigger: ACGGTGCCGGAGCTGCGATGGCTTCCTGACCTGCCATGAGTGTCTGCAGAGCCACGAGTGTGGCTGGTGTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CAAACATCCACAAGGTGGCATCGGGTCCATCCACCATaGTGTGGCCCAGGCGGTGCAGGAAGCGGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: QTSTRWHRVHPP*CGPGGAGSGWQ
Trigger: CTGCCAGCCGCTTCCTGCACCGCCTGGGCCACACCATGGTGGATGGACCCGATGCCACCTTGTGGATGTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp AAGCAGGCCCCATGGCACCAGGTGCAGGCCCCAGACTaGTTACAAGCTTCAGGTGAGGACAGCAGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: KQAPWHQVQAPD*LQASGEDSRRQ
Trigger: CTGCCGCCTGCTGTCCTCACCTGAAGCTTGTAACCAGTCTGGGGCCTGCACCTGGTGCCATGGGGCCTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CATTCCGTGGAGCAGTTGCGGCCCACAAAGCCAAAGTaGCAGCGGCAGTGGTCGGGCTCCACACATGAGCCG +
Preference number: 6 (lower is better)
Translates to: HSVEQLRPTKPK*QRQWSGSTHEP
Trigger: CGGCTCATGTGTGGAGCCCGACCACTGCCGCTGCCACTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp TGGCTGCCCTTGGTGTGGTTGCGGCAGAGCAAGCAGTaGTCACGCGCCCCAACACCAGCGCATTCACTGTGG +
Preference number: 6 (lower is better)
Translates to: WLPLVWLRQSKQ*SRAPTPAHSLW
Trigger: CCACAGTGAATGCGCTGGTGTTGGGGCGCGTGACCACTGCTTGCTCTGCCGCAACCACACCAAGGGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS CAA 72 bp TCACTGTGGCGGTTGCAGCGGCATTCCGTGGAGCAGTaGCGGCCCACAAAGCCAAAGTGGCAGCGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: SLWRLQRHSVEQ*RPTKPKWQRQW
Trigger: CCACTGCCGCTGCCACTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAATGCCGCTGCAACCGCCACAGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 90 bp AAGCAGTGGTCACGCGCCCCAACACCAGCGCATTCACTGTGGCGGTaGCAGCGGCATTCCGTGGAGCAGTTGCGGCCCACAAAGCCAAAG +
Preference number: 6 (lower is better)
Translates to: KQWSRAPTPAHSLWR*QRHSVEQLRPTKPK
Trigger: CTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAATGCCGCTGCAACCGCCACAGTGAATGCGCTGGTGTTGGGGCGCGTGACCACTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp CTGCCGGAATCACCTGCTCCCAATAGCCCCCGCTGGTaGTGTCAAGGCGGAAACGGAAGAGGCCAGAGGAGA +
Preference number: 6 (lower is better)
Translates to: LPESPAPNSPRW*CQGGNGRGQRR
Trigger: TCTCCTCTGGCCTCTTCCGTTTCCGCCTTGACAGCACCAGCGGGGGCTATTGGGAGCAGGTGATTCCGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp GAAACCCCCAGAGATATACAGGCGGCTCCCGACTGCTaGCACAGCATGGGCCACAGACTCCTCCATTGGGGG +
Preference number: 6 (lower is better)
Translates to: ETPRDIQAAPDC*HSMGHRLLHWG
Trigger: CCCCCAATGGAGGAGTCTGTGGCCCATGCTGTGGCAGCAGTCGGGAGCCGCCTGTATATCTCTGGGGGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp CCCGAAACCCCCAGAGATATACAGGCGGCTCCCGACTaGTGCCACAGCATGGGCCACAGACTCCTCCATTGG +
Preference number: 6 (lower is better)
Translates to: PETPRDIQAAPD*CHSMGHRLLHW
Trigger: CCAATGGAGGAGTCTGTGGCCCATGCTGTGGCAGCAGTCGGGAGCCGCCTGTATATCTCTGGGGGTTTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp AGCCGTGGGGCTGGTCGTGGCAATTCTGCGTCTCGTTaGAGTCGTGGTGCCCGTTTGCACACTCGTCCTCAG +
Preference number: 6 (lower is better)
Translates to: SRGAGRGNSASR*SRGARLHTRPQ
Trigger: CTGAGGACGAGTGTGCAAACGGGCACCACGACTGCAACGAGACGCAGAATTGCCACGACCAGCCCCACGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CCGGGGCAGGACTCAGGTCCCAAGACTCCCAGGTGTTaGCGGAGAAGTTGTATAGGACGAGGTCACCCAGGG +
Preference number: 6 (lower is better)
Translates to: PGQDSGPKTPRC*RRSCIGRGHPG
Trigger: CCCTGGGTGACCTCGTCCTATACAACTTCTCCGCCAACACCTGGGAGTCTTGGGACCTGAGTCCTGCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CCGGGTCCCGGGAGCAGACGCTGTGGTCTGTGTACATaGAGCAGTAGTCCAAGTGGTAGTCAGGGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: PGPGSRRCGLCT*SSSPSGSQGQV
Trigger: CACCTGCCCCTGACTACCACTTGGACTACTGCTCCATGTACACAGACCACAGCGTCTGCTCCCGGGACCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CTCAGCCCCTGGTCCACCTGGCCCTCCAGGCAGCATTaGGTAGATGAAGCCACGGTAGACCAGGGACACATC +
Preference number: 6 (lower is better)
Translates to: LSPWSTWPSRQH*VDEATVDQGHI
Trigger: GATGTGTCCCTGGTCTACCGTGGCTTCATCTACCCAATGCTGCCTGGAGGGCCAGGTGGACCAGGGGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS CCA 72 bp AGGAAGCAGGTGTGGGTGGACTGGCACCAGGCGCACTaGCTAGAGTTGGCCAGGCAGTCCTCACAGGTCAGT +
Preference number: 6 (lower is better)
Translates to: RKQVWVDWHQAH*LELARQSSQVS
Trigger: ACTGACCTGTGAGGACTGCCTGGCCAACTCTAGCCAGTGCGCCTGGTGCCAGTCCACCCACACCTGCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp GTGTACACTGTCGTCCCAGCCTCGACAGCCCCCGTGTaGGTACCGGGCCAAGTAGGCAGCAAACAGGAAGCA +
Preference number: 6 (lower is better)
Translates to: VYTVVPASTAPV*VPGQVGSKQEA
Trigger: TGCTTCCTGTTTGCTGCCTACTTGGCCCGGTACCCACACGGGGGCTGTCGAGGCTGGGACGACAGTGTACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CAGCGCATTCACTGTGGCGGTTGCAGCGGCATTCCGTaGAGCAGTTGCGGCCCACAAAGCCAAAGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: QRIHCGGCSGIP*SSCGPQSQSGS
Trigger: GCTGCCACTTTGGCTTTGTGGGCCGCAACTGCTCCACGGAATGCCGCTGCAACCGCCACAGTGAATGCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 72 bp GCCGGGGCAGGACTCAGGTCCCAAGACTCCCAGGTGTaGGCGGAGAAGTTGTATAGGACGAGGTCACCCAGG +
Preference number: 6 (lower is better)
Translates to: AGAGLRSQDSQV*AEKLYRTRSPR
Trigger: CCTGGGTGACCTCGTCCTATACAACTTCTCCGCCAACACCTGGGAGTCTTGGGACCTGAGTCCTGCCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 72 bp CCCTGTAGGCACCGTCCCAGTGTGGGGTTGTCCTCATaGCCACACCAGCCACACTCGTGGCTCTGCAGACAC +
Preference number: 6 (lower is better)
Translates to: PCRHRPSVGLSS*PHQPHSWLCRH
Trigger: GTGTCTGCAGAGCCACGAGTGTGGCTGGTGTGGCAATGAGGACAACCCCACACTGGGACGGTGCCTACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 72 bp GAGAAGTCCCCCTGTAGGCACCGTCCCAGTGTGGGGTaGTCCTCATTGCCACACCAGCCACACTCGTGGCTC +
Preference number: 6 (lower is better)
Translates to: EKSPCRHRPSVG*SSLPHQPHSWL
Trigger: GAGCCACGAGTGTGGCTGGTGTGGCAATGAGGACAACCCCACACTGGGACGGTGCCTACAGGGGGACTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 90 bp CCATGTAATTGCCCAGAACACTGGCTGTGTGGAAGGCTCGCTCCCTaGGGCCCTGAAGCCCATCCCGCCCCTTCAGCGTCGTCCACACAT +
Preference number: 6 (lower is better)
Translates to: PCNCPEHWLCGRLAP*GPEAHPAPSASSTH
Trigger: ATGTGTGGACGACGCTGAAGGGGCGGGATGGGCTTCAGGGCCCAAGGGAGCGAGCCTTCCACACAGCCAGTGTTCTGGGCAATTACATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 90 bp GAGAAGTCCCCCTGTAGGCACCGTCCCAGTGTGGGGTTGTCCTCATaGCCACACCAGCCACACTCGTGGCTCTGCAGACACTCATGGCAG +
Preference number: 6 (lower is better)
Translates to: EKSPCRHRPSVGLSS*PHQPHSWLCRHSWQ
Trigger: CTGCCATGAGTGTCTGCAGAGCCACGAGTGTGGCTGGTGTGGCAATGAGGACAACCCCACACTGGGACGGTGCCTACAGGGGGACTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 72 bp GCTCTGGCAGCCACCCGGGCACAGGGAGAAGCGGAATaGGGCGTTAAAGCCCAGCAGGTTGTAGTTGGCATC +
Preference number: 6 (lower is better)
Translates to: ALAATRAQGEAE*GVKAQQVVVGI
Trigger: GATGCCAACTACAACCTGCTGGGCTTTAACGCCTCATTCCGCTTCTCCCTGTGCCCGGGTGGCTGCCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 72 bp GCCCTCAGGGGTTCCTGGCGGGGCAAGCTCAGCTCCTaGCACCCATTGATGGCAGCCAAGGTGGTAGAAGAA +
Preference number: 6 (lower is better)
Translates to: ALRGSWRGKLSS*HPLMAAKVVEE
Trigger: TTCTTCTACCACCTTGGCTGCCATCAATGGGTGTCAGGAGCTGAGCTTGCCCCGCCAGGAACCCCTGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 72 bp CCACCGGCATGGGGGACACATTCAGCAGAGAGTGGCTaGAGCACGTCCAGTCATAGGTGGGCTGCACGGAGA +
Preference number: 6 (lower is better)
Translates to: PPAWGTHSAESG*STSSHRWAARR
Trigger: TCTCCGTGCAGCCCACCTATGACTGGACGTGCTTCAGCCACTCTCTGCTGAATGTGTCCCCCATGCCGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 72 bp GTAGCACTGCTGGCCGCCCAGCGGACTCCCGTGAAATaGTTCCCGGCACTTGGCGCACTGGTACTTGTAGCA +
Preference number: 6 (lower is better)
Translates to: VALLAAQRTPVK*FPALGALVLVA
Trigger: TGCTACAAGTACCAGTGCGCCAAGTGCCGGGAATCATTTCACGGGAGTCCGCTGGGCGGCCAGCAGTGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS GCA 72 bp ACACAGGGCTCCATAGGGGGCCGATCCCATGAACAGTaGCCAGCATTACGGACTCAGGCTGCTGCAGGCCAA +
Preference number: 6 (lower is better)
Translates to: TQGSIGGRSHEQ*PALRTQAAAGQ
Trigger: TTGGCCTGCAGCAGCCTGAGTCCGTAATGCTGGGCACTGTTCATGGGATCGGCCCCCTATGGAGCCCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp AGGCGGAAACGGAAGAGGCCAGAGGAGAAGAGGTCGTaGGGGGTGCGGCCTCCAGACACATATAGCCAGACA +
Preference number: 6 (lower is better)
Translates to: RRKRKRPEEKRS*GVRPPDTYSQT
Trigger: TGTCTGGCTATATGTGTCTGGAGGCCGCACCCCGCACGACCTCTTCTCCTCTGGCCTCTTCCGTTTCCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp CCTGTAGGCACCGTCCCAGTGTGGGGTTGTCCTCATTaGCACACCAGCCACACTCGTGGCTCTGCAGACACT +
Preference number: 6 (lower is better)
Translates to: PVGTVPVWGCPH*HTSHTRGSADT
Trigger: AGTGTCTGCAGAGCCACGAGTGTGGCTGGTGTGGCAATGAGGACAACCCCACACTGGGACGGTGCCTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp GCTGCTGCTCCAAACACAGTGCTGCCAGCCCCCATCTaGTCCCTTAGAGTCCAGGCAGGAGGTACAGTTGGG +
Preference number: 6 (lower is better)
Translates to: AAAPNTVLPAPI*SLRVQAGGTVG
Trigger: CCCAACTGTACCTCCTGCCTGGACTCTAAGGGAGCAGATGGGGGCTGGCAGCACTGTGTTTGGAGCAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp TGGCCGCAGAAGGCAGCTATGAGGCTGCGGTCCGACTaGACAACACCAGTGTCCAGGAAGCGTGGGAATCCA +
Preference number: 6 (lower is better)
Translates to: WPQKAAMRLRSD*TTPVSRKRGNP
Trigger: TGGATTCCCACGCTTCCTGGACACTGGTGTTGTCCAGTCGGACCGCAGCCTCATAGCTGCCTTCTGCGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp CTCTGGGCTCCTGACACCCAGGTGCCGGTTGCCAGCTaGTACTCCAGCAGCTGCTGGTTGAAGCCATTTTCC +
Preference number: 6 (lower is better)
Translates to: LWAPDTQVPVAS*YSSSCWLKPFS
Trigger: GGAAAATGGCTTCAACCAGCAGCTGCTGGAGTACCAGCTGGCAACCGGCACCTGGGTGTCAGGAGCCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp GAGATGCAGATGTGGCTATTTCCACGACAAAAGGCGTaGCAGGGCCGGCAGGTCCCGCCTCCGACAGCTGAA +
Preference number: 6 (lower is better)
Translates to: EMQMWLFPRQKA*QGRQVPPPTAE
Trigger: TTCAGCTGTCGGAGGCGGGACCTGCCGGCCCTGCCACGCCTTTTGTCGTGGAAATAGCCACATCTGCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS CAA 72 bp GAGCCATTGAGCTGGCCCTGGATCTCTACTGCATACTaGTGGTCCCGCCCAGGCAGAGGGAAGAGGCGAGCA +
Preference number: 6 (lower is better)
Translates to: EPLSWPWISTAY*WSRPGRGKRRA
Trigger: TGCTCGCCTCTTCCCTCTGCCTGGGCGGGACCACAAGTATGCAGTAGAGATCCAGGGCCAGCTCAATGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 90 bp CACGCAGCCTCGGAGCAGTTCCCTGCCCAGAAGACCTCTCGCTGGTaGATCCGACAGTCATTCTCAGAGGTGCAGGACCCATTGCGTCCA +
Preference number: 6 (lower is better)
Translates to: HAASEQFPAQKTSRW*IRQSFSEVQDPLRP
Trigger: TGGACGCAATGGGTCCTGCACCTCTGAGAATGACTGTCGGATCAACCAGCGAGAGGTCTTCTGGGCAGGGAACTGCTCCGAGGCTGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 72 bp CCTATAGACACAGGGCTCCATAGGGGGCCGATCCCATaGACAGTGCCCAGCATTACGGACTCAGGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: PIDTGLHRGPIP*TVPSITDSGCC
Trigger: GCAGCAGCCTGAGTCCGTAATGCTGGGCACTGTTCATGGGATCGGCCCCCTATGGAGCCCTGTGTCTATAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 72 bp CTGGTCCACCTGGCCCTCCAGGCAGCATTGGGTAGATaGAGCCACGGTAGACCAGGGACACATCTGTCTCTG +
Preference number: 6 (lower is better)
Translates to: LVHLALQAALGR*SHGRPGTHLSL
Trigger: CAGAGACAGATGTGTCCCTGGTCTACCGTGGCTTCATCTACCCAATGCTGCCTGGAGGGCCAGGTGGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS TCA 72 bp AGGCTGCTCCCCAGGAACTTGGCCCAGACCCCGAGATaGGCCACGCACATTCCTCATACGATCTCGCTTTGC +
Preference number: 6 (lower is better)
Translates to: RLLPRNLAQTPR*ATHIPHTISLC
Trigger: GCAAAGCGAGATCGTATGAGGAATGTGCGTGGCTCATCTCGGGGTCTGGGCCAAGTTCCTGGGGAGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp ACAGCCCTGTCATGTTGTCCATGGTATAGCCGGTCTTaGAGCTGCACTCATAGCCGTGGGGCTGGTCGTGGC +
Preference number: 6 (lower is better)
Translates to: TALSCCPWYSRS*SCTHSRGAGRG
Trigger: GCCACGACCAGCCCCACGGCTATGAGTGCAGCTGCAAGACCGGCTATACCATGGACAACATGACAGGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp GCGGTCCGACTGGACAACACCAGTGTCCAGGAAGCGTaGGAATCCATCAAACGCCAGGACGTAGCTCAGCGT +
Preference number: 6 (lower is better)
Translates to: AVRLDNTSVQEA*ESIKRQDVAQR
Trigger: ACGCTGAGCTACGTCCTGGCGTTTGATGGATTCCCACGCTTCCTGGACACTGGTGTTGTCCAGTCGGACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp GCCTCGGAGCAGTTCCCTGCCCAGAAGACCTCTCGCTaGTTGATCCGACAGTCATTCTCAGAGGTGCAGGAC +
Preference number: 6 (lower is better)
Translates to: ASEQFPAQKTSR*LIRQSFSEVQD
Trigger: GTCCTGCACCTCTGAGAATGACTGTCGGATCAACCAGCGAGAGGTCTTCTGGGCAGGGAACTGCTCCGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 72 bp CGGAGCAGTTCCCTGCCCAGAAGACCTCTCGCTGGTTaGTCCGACAGTCATTCTCAGAGGTGCAGGACCCAT +
Preference number: 6 (lower is better)
Translates to: RSSSLPRRPLAG*SDSHSQRCRTH
Trigger: ATGGGTCCTGCACCTCTGAGAATGACTGTCGGATCAACCAGCGAGAGGTCTTCTGGGCAGGGAACTGCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp AACGGAAGAGGCCAGAGGAGAAGAGGTCGTGCGGGGTaGGGCCTCCAGACACATATAGCCAGACATCATCCA +
Preference number: 6 (lower is better)
Translates to: NGRGQRRRGRAG*GLQTHIARHHP
Trigger: TGGATGATGTCTGGCTATATGTGTCTGGAGGCCGCACCCCGCACGACCTCTTCTCCTCTGGCCTCTTCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp GGGTGTGCACATTGCCCCCATAGACCACCATGTAATTaGCCAGAACACTGGCTGTGTGGAAGGCTCGCTCCC +
Preference number: 6 (lower is better)
Translates to: GCAHCPHRPPCN*PEHWLCGRLAP
Trigger: GGGAGCGAGCCTTCCACACAGCCAGTGTTCTGGGCAATTACATGGTGGTCTATGGGGGCAATGTGCACACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp TTGTCCTCATTGCCACACCAGCCACACTCGTGGCTCTaGAGACACTCATGGCAGGTCAGGAAGCCATCGCAG +
Preference number: 6 (lower is better)
Translates to: LSSLPHQPHSWL*RHSWQVRKPSQ
Trigger: CTGCGATGGCTTCCTGACCTGCCATGAGTGTCTGCAGAGCCACGAGTGTGGCTGGTGTGGCAATGAGGACAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp GGTACTTGTAGCAGTCTCGACGGTCACTGGGGGAGCTaGCCTGGCATGTGCCCGTCTCTGTGTTATTCTGAC +
Preference number: 6 (lower is better)
Translates to: GTCSSLDGHWGS*PGMCPSLCYSD
Trigger: GTCAGAATAACACAGAGACGGGCACATGCCAGGGCAGCTCCCCCAGTGACCGTCGAGACTGCTACAAGTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS CCA 72 bp GGCTCTGGAAGCCGAGGGCTGAGCCCTATAGAGCGATaGAAGGCCCTGTATATGGAGTCATTATGGACGGGG +
Preference number: 6 (lower is better)
Translates to: GSGSRGLSPIER*KALYMESLWTG
Trigger: CCCCGTCCATAATGACTCCATATACAGGGCCTTCCATCGCTCTATAGGGCTCAGCCCTCGGCTTCCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp TCGTCCACACATGCCGATCCACGTGGAAAAGCTCAGTaGAGTTCACTCGCACAGAGAACCGGGCAGTGGAGG +
Preference number: 6 (lower is better)
Translates to: SSTHADPRGKAQ*SSLAQRTGQWR
Trigger: CCTCCACTGCCCGGTTCTCTGTGCGAGTGAACTCCACTGAGCTTTTCCACGTGGATCGGCATGTGTGGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp TGCCCCCATAGACCACCATGTAATTGCCCAGAACACTaGCTGTGTGGAAGGCTCGCTCCCTTGGGCCCTGAA +
Preference number: 6 (lower is better)
Translates to: CPHRPPCNCPEH*LCGRLAPLGPE
Trigger: TTCAGGGCCCAAGGGAGCGAGCCTTCCACACAGCCAGTGTTCTGGGCAATTACATGGTGGTCTATGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp ACACCCAGGCTCTGGTTACAAGTTCCTGCCCCAGTGTaGGCATTGCAGTTCTCAGGACACAGAGCCATGCGG +
Preference number: 6 (lower is better)
Translates to: TPRLWLQVPAPV*ALQFSGHRAMR
Trigger: CCGCATGGCTCTGTGTCCTGAGAACTGCAATGCCCACACTGGGGCAGGAACTTGTAACCAGAGCCTGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 72 bp TCGGAGCAGTTCCCTGCCCAGAAGACCTCTCGCTGGTaGATCCGACAGTCATTCTCAGAGGTGCAGGACCCA +
Preference number: 6 (lower is better)
Translates to: SEQFPAQKTSRW*IRQSFSEVQDP
Trigger: TGGGTCCTGCACCTCTGAGAATGACTGTCGGATCAACCAGCGAGAGGTCTTCTGGGCAGGGAACTGCTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 72 bp GGCCGTAAAAACCTGGAGAGGACCCTCTACCCGGGGTaGGGCCCTGCAAATGCGACCTCTATAGGCATAACA +
Preference number: 6 (lower is better)
Translates to: GRKNLERTLYPG*GPANATSIGIT
Trigger: TGTTATGCCTATAGAGGTCGCATTTGCAGGGCCTCACCCCGGGTAGAGGGTCCTCTCCAGGTTTTTACGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS TCA 72 bp CCAGGGACACATCTGTCTCTGCGCTGGGTGTTAGGGTaGTGGTCGTGCTGCGGACAATTGAGACCTTGTCAG +
Preference number: 6 (lower is better)
Translates to: PGTHLSLRWVLG*WSCCGQLRPCQ
Trigger: CTGACAAGGTCTCAATTGTCCGCAGCACGACCATCACCCTAACACCCAGCGCAGAGACAGATGTGTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000378073.5
CDS CCA 72 bp ATAGAGCGATGGAAGGCCCTGTATATGGAGTCATTATaGACGGGGCCGAACCCTAGGGACCGTAGGAGTCCC +
Preference number: 6 (lower is better)
Translates to: IERWKALYMESL*TGPNPRDRRSP
Trigger: GGGACTCCTACGGTCCCTAGGGTTCGGCCCCGTCCATAATGACTCCATATACAGGGCCTTCCATCGCTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CCA 72 bp GCCCTGGCATGTGCCCGTCTCTGTGTTATTCTGACATaGACAGCCCGTCCCATCCTGCTCGTTACATGTGTC +
Preference number: 6 (lower is better)
Translates to: ALACARLCVILT*TARPILLVTCV
Trigger: GACACATGTAACGAGCAGGATGGGACGGGCTGTCCATGTCAGAATAACACAGAGACGGGCACATGCCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251268.11
ENST00000334370.8
CDS CAA 72 bp CTCAGGTCCCAAGACTCCCAGGTGTTGGCGGAGAAGTaGTATAGGACGAGGTCACCCAGGGCATTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: LRSQDSQVLAEK*YRTRSPRALLR
Trigger: CCTCAACAATGCCCTGGGTGACCTCGTCCTATACAACTTCTCCGCCAACACCTGGGAGTCTTGGGACCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp AAACCTGGAGAGGACCCTCTACCCGGGGTGAGGCCCTaGAAATGCGACCTCTATAGGCATAACATGACCTTG +
Preference number: 6 (lower is better)
Translates to: KPGEDPLPGVRP*KCDLYRHNMTL
Trigger: CAAGGTCATGTTATGCCTATAGAGGTCGCATTTGCAGGGCCTCACCCCGGGTAGAGGGTCCTCTCCAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp CTGTCATGTTGTCCATGGTATAGCCGGTCTTGCAGCTaGACTCATAGCCGTGGGGCTGGTCGTGGCAATTCT +
Preference number: 6 (lower is better)
Translates to: LSCCPWYSRSCS*THSRGAGRGNS
Trigger: AGAATTGCCACGACCAGCCCCACGGCTATGAGTGCAGCTGCAAGACCGGCTATACCATGGACAACATGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 90 bp TCTCGCTGGTTGATCCGACAGTCATTCTCAGAGGTGCAGGACCCATaGCGTCCAATGCAAGCACCTTCGGGGCAGTTGGTACACCACTTA +
Preference number: 6 (lower is better)
Translates to: SRWLIRQSFSEVQDP*RPMQAPSGQLVHHL
Trigger: TAAGTGGTGTACCAACTGCCCCGAAGGTGCTTGCATTGGACGCAATGGGTCCTGCACCTCTGAGAATGACTGTCGGATCAACCAGCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS GCA 72 bp AGTCATTCTCAGAGGTGCAGGACCCATTGCGTCCAATaGAAGCACCTTCGGGGCAGTTGGTACACCACTTAC +
Preference number: 6 (lower is better)
Translates to: SHSQRCRTHCVQ*KHLRGSWYTTY
Trigger: GTAAGTGGTGTACCAACTGCCCCGAAGGTGCTTGCATTGGACGCAATGGGTCCTGCACCTCTGAGAATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 72 bp TTGATCCGACAGTCATTCTCAGAGGTGCAGGACCCATaGCGTCCAATGCAAGCACCTTCGGGGCAGTTGGTA +
Preference number: 6 (lower is better)
Translates to: LIRQSFSEVQDP*RPMQAPSGQLV
Trigger: TACCAACTGCCCCGAAGGTGCTTGCATTGGACGCAATGGGTCCTGCACCTCTGAGAATGACTGTCGGATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
CDS CAA 72 bp TCCTCTGGGTCCAGTGAGTACTTCTTTGGCTCTCCCTaGGACATTTGTAACTCCTTCCTGGAGATGCAGATG +
Preference number: 6 (lower is better)
Translates to: SSGSSEYFFGSP*DICNSFLEMQM
Trigger: CATCTGCATCTCCAGGAAGGAGTTACAAATGTCCAAGGGAGAGCCAAAGAAGTACTCACTGGACCCAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1
CDS CCA 72 bp TCTTTGGCTCTCCCTTGGACATTTGTAACTCCTTCCTaGAGATGCAGATGTGGCTATTTCCACGACAAAAGG +
Preference number: 6 (lower is better)
Translates to: SLALPWTFVTPS*RCRCGYFHDKR
Trigger: CCTTTTGTCGTGGAAATAGCCACATCTGCATCTCCAGGAAGGAGTTACAAATGTCCAAGGGAGAGCCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251268.11
ENST00000334370.8
ENST00000378073.5
ENST00000593647.1