RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MEGF6 (Homo sapiens)

Ensembl gene IDs: ENSG00000162591

Ensembl transcript IDs: ENST00000294599.8, ENST00000356575.9, ENST00000461795.1, ENST00000475790.5, ENST00000485002.6, ENST00000491842.1, ENST00000494257.1

Found 912 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGCTCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTaGCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGG +
Preference number: 1 (lower is better)
Translates to: PARSAAPSSPGHRSS*RCWRGTGPHFCRSR
Trigger: CCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGAGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR GCA 90 bp CGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGTTaGTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCT +
Preference number: 1 (lower is better)
Translates to: RSAAPSSPGHRSSCR*WRGTGPHFCRSRCA
Trigger: AGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR CCA 90 bp AGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGTTGCTaGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGC +
Preference number: 1 (lower is better)
Translates to: SAAPSSPGHRSSCRC*RGTGPHFCRSRCAR
Trigger: GCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR GCA 90 bp GCAAAGGGCCCCGGGTGCACTGGGAGGTCCCTGGGTGCACCGTTATaGTGGCCGGGCCCCAGGGAGGAGCCCACACAGAGTCCACGTAAC +
Preference number: 1 (lower is better)
Translates to: AKGPGCTGRSLGAPL*WPGPREEPTQSPRN
Trigger: GTTACGTGGACTCTGTGTGGGCTCCTCCCTGGGGCCCGGCCAGCATAACGGTGCACCCAGGGACCTCCCAGTGCACCCGGGGCCCTTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR GCA 90 bp AGAAGCCGGGGCCGCAGCGGCAGGTGCCCGTGGCAGGCTCACACGTaGTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGGCTCCGT +
Preference number: 1 (lower is better)
Translates to: RSRGRSGRCPWQAHT*CCCGRSTPDGRRLR
Trigger: ACGGAGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTGCCGCTGCGGCCCCGGCTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR GCA 90 bp GGTGCTCGCAGGCCTGGCCATAGAAGCCGGGGCCGCAGCGGCAGGTaGCCGTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACT +
Preference number: 1 (lower is better)
Translates to: GARRPGHRSRGRSGR*PWQAHTCCCCGRST
Trigger: AGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTGCCGCTGCGGCCCCGGCTTCTATGGCCAGGCCTGCGAGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR GCA 90 bp CCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTaGTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCCTCGCTCA +
Preference number: 1 (lower is better)
Translates to: PLLAWHRPPFLQEQV*SQPTPNRFWGQPRS
Trigger: TGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR CCA 90 bp TGGAGGACAGTGGCCCTGTGCCTGCACCTGCGCCTGCACCCACACTaGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGA +
Preference number: 1 (lower is better)
Translates to: WRTVALCLHLRLHPH*RPHLSSVQLRAAGR
Trigger: TCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCAGGCACAGGGCCACTGTCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR CCA 90 bp AAGGGCCCCGGGTGCACTGGGAGGTCCCTGGGTGCACCGTTATGCTaGCCGGGCCCCAGGGAGGAGCCCACACAGAGTCCACGTAACACA +
Preference number: 1 (lower is better)
Translates to: KGPGCTGRSLGAPLC*PGPREEPTQSPRNT
Trigger: TGTGTTACGTGGACTCTGTGTGGGCTCCTCCCTGGGGCCCGGCCAGCATAACGGTGCACCCAGGGACCTCCCAGTGCACCCGGGGCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CCA 90 bp CGCAGGCCTGGCCATAGAAGCCGGGGCCGCAGCGGCAGGTGCCCGTaGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGAT +
Preference number: 1 (lower is better)
Translates to: RRPGHRSRGRSGRCP*QAHTCCCCGRSTPD
Trigger: ATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTGCCGCTGCGGCCCCGGCTTCTATGGCCAGGCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR GCA 90 bp GGCCTAGCACCAAAAAGCCTGCCTGGAGGACAGTGGCCCTGTGCCTaGACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAG +
Preference number: 1 (lower is better)
Translates to: GLAPKSLPGGQWPCA*TCACTHTGAHTCPQ
Trigger: CTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCAGGCACAGGGCCACTGTCCTCCAGGCAGGCTTTTTGGTGCTAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR GCA 90 bp CACAGGAGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTaGAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGG +
Preference number: 1 (lower is better)
Translates to: HRSSCRCWRGTGPHF*RSRCARSPRQTGSG
Trigger: CCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR CCA 90 bp TTCCAGTCCCAGGGCCTAGCACCAAAAAGCCTGCCTGGAGGACAGTaGCCCTGTGCCTGCACCTGCGCCTGCACCCACACTGGCGCCCAC +
Preference number: 1 (lower is better)
Translates to: FQSQGLAPKSLPGGQ*PCACTCACTHTGAH
Trigger: GTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCAGGCACAGGGCCACTGTCCTCCAGGCAGGCTTTTTGGTGCTAGGCCCTGGGACTGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR CCA 90 bp GCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAAAGCCTGCCTaGAGGACAGTGGCCCTGTGCCTGCACCTGCGCCTGCACCCACAC +
Preference number: 1 (lower is better)
Translates to: AGRLPVPGPSTKKPA*RTVALCLHLRLHPH
Trigger: GTGTGGGTGCAGGCGCAGGTGCAGGCACAGGGCCACTGTCCTCCAGGCAGGCTTTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR GCA 90 bp GCACCAAAAAGCCTGCCTGGAGGACAGTGGCCCTGTGCCTGCACCTaGGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAAC +
Preference number: 1 (lower is better)
Translates to: APKSLPGGQWPCACT*ACTHTGAHTCPQSN
Trigger: GTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCAGGCACAGGGCCACTGTCCTCCAGGCAGGCTTTTTGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR GCA 90 bp AGGCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTaGTGGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAG +
Preference number: 1 (lower is better)
Translates to: RLPSSRPHQPPRATG*WAVHSPPRPSKEGQ
Trigger: CTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR CCA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTaGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGC +
Preference number: 1 (lower is better)
Translates to: KGSTRSSGPVKCPSQ*SPKARVPSGWDWRG
Trigger: GCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR CCA 90 bp CTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTaGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTAC +
Preference number: 1 (lower is better)
Translates to: LPSSRPHQPPRATGC*AVHSPPRPSKEGQY
Trigger: GTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR CCA 90 bp GGGAGAGAGAGTCCTATGTTGCGGTGTGAGTGCAGCCCTCTCCATTaGCCACCCCACTCTGCAGAGGAGCCCCCAGCCACCACCTCTACC +
Preference number: 1 (lower is better)
Translates to: GRESPMLRCECSPLH*PPHSAEEPPATTST
Trigger: GGTAGAGGTGGTGGCTGGGGGCTCCTCTGCAGAGTGGGGTGGCCAATGGAGAGGGCTGCACTCACACCGCAACATAGGACTCTCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR TCA 90 bp TCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTGGGCCCGTaGAGTGTCCTTCTCAGTGGTCACCAAAGGCCAGGGTCCCCTCTG +
Preference number: 1 (lower is better)
Translates to: STALKGRAVPGALGP*SVLLSGHQRPGSPL
Trigger: CAGAGGGGACCCTGGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR CCA 90 bp CACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTaGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCAGGGT +
Preference number: 1 (lower is better)
Translates to: HSPPRPSKEGQYQEL*AREVSFSVVTKGQG
Trigger: ACCCTGGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR CCA 90 bp AGGCCACGAGGAGGTTGCCTGCTCCTTTACCTTCCTAGGTTTACATaGTACCGGAGCCAGCAGCCTGGTGAGCCCGCAGGAGCCTGCAGA +
Preference number: 1 (lower is better)
Translates to: RPRGGCLLLYLPRFT*YRSQQPGEPAGACR
Trigger: TCTGCAGGCTCCTGCGGGCTCACCAGGCTGCTGGCTCCGGTACCATGTAAACCTAGGAAGGTAAAGGAGCAGGCAACCTCCTCGTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CCA 90 bp CCAGCCCTCCTCCCCCTGGGCCATTCTCTGGGAACAGCCAGTCTCTaGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATA +
Preference number: 1 (lower is better)
Translates to: PALLPLGHSLGTASL*VSAVMNAAPAFSSI
Trigger: TATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAGAGACTGGCTGTTCCCAGAGAATGGCCCAGGGGGAGGAGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CCA 90 bp TCCTCTGTGACAGCTCCCTTGCTGTCTGTGAGCAACCAAGCTCACTaGACTCCTCCTCCTCCTGCTGGTGAAATTGTCTGCCCTGGGGCC +
Preference number: 1 (lower is better)
Translates to: SSVTAPLLSVSNQAH*TPPPPAGEIVCPGA
Trigger: GGCCCCAGGGCAGACAATTTCACCAGCAGGAGGAGGAGGAGTCCAGTGAGCTTGGTTGCTCACAGACAGCAAGGGAGCTGTCACAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR GCA 90 bp CCAGTCCGTCTCTCTCTGGCTGCTGCTTCTGCATCCCCACCATCCTaGCCTCCCTTATCACTGTTCTACTTTAAAGTCTCCCCACAGCGG +
Preference number: 1 (lower is better)
Translates to: PVRLSLAAASASPPS*PPLSLFYFKVSPQR
Trigger: CCGCTGTGGGGAGACTTTAAAGTAGAACAGTGATAAGGGAGGGCAGGATGGTGGGGATGCAGAAGCAGCAGCCAGAGAGAGACGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR TCA 90 bp CGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTaGGCTGTATCCACTCACCCCATCTGCTGGATGCTTCATTTCAAG +
Preference number: 1 (lower is better)
Translates to: RCLSLRLPAIPGRIS*AVSTHPICWMLHFK
Trigger: CTTGAAATGAAGCATCCAGCAGATGGGGTGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CCA 90 bp ATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTaGGAGAATCTCCTGAGCTGTATCCACTCACCCCATCTGCTGGAT +
Preference number: 1 (lower is better)
Translates to: IYLCTLSLFTPPCYS*ENLLSCIHSPHLLD
Trigger: ATCCAGCAGATGGGGTGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR GCA 90 bp TTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTaGTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCACCCCAT +
Preference number: 1 (lower is better)
Translates to: FPFIYLCTLSLFTPP*YSWENLLSCIHSPH
Trigger: ATGGGGTGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR TCA 90 bp TCAATGACTTCTTACTTTTGTATTTTGCAGTTAGATGGATGTGAATaGACACCTCCCTTACCCATTTCCATTCATCTATCTCTGTACGTT +
Preference number: 1 (lower is better)
Translates to: SMTSYFCILQLDGCE*TPPLPISIHLSLYV
Trigger: AACGTACAGAGATAGATGAATGGAAATGGGTAAGGGAGGTGTTCATTCACATCCATCTAACTGCAAAATACAAAAGTAAGAAGTCATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR GCA 90 bp GCGTTTATTATGTGTGTTGAGAATGTTCAATATCCTCCTTCTTGCTaGTTGAAACTATATAATATATGGTCAGGAGTTTGTTTTTCCGTC +
Preference number: 1 (lower is better)
Translates to: AFIMCVENVQYPPSC*LKLYNIWSGVCFSV
Trigger: GACGGAAAAACAAACTCCTGACCATATATTATATAGTTTCAAGCAGCAAGAAGGAGGATATTGAACATTCTCAACACACATAATAAACGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CAA 90 bp TCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGTaGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: SQCRPVQPRPQEQLP*LAWHRPPFLQEQVC
Trigger: GCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR-3UTR GCA 90 bp TGGAGGCGGGCAGTGTGCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCAAGGAGCAGCTGCCGTTaGTGGCGTGGCACAGGCCCC +
Preference number: 2 (lower is better)
Translates to: WRRAVCPLPGTWAPCSHPRSSCR*WRGTGP
Trigger: GGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCT...TGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGCACACTGCCCGCCTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR-3UTR GCA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTCGTGCCCCTGGGTTCTaGAGAGCCAGGCCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTRAPGF*RARPGG
Trigger: GCCTCCTGGCCTGGCTCTGCAGAACCCAGGGGCACG...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR-3UTR CCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCGGCCAGGGTCCCCTCTaGCTGGGACTGGAGAGGCGG +
Preference number: 2 (lower is better)
Translates to: HTSLQERQVAGLSTALHGGQGPL*LGLERR
Trigger: CCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCC...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR-3UTR CCA 90 bp GCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCCCCAGAGCGTGCCCCTaGGTTCTGCAGAGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: APTPVLSPTQSRGESGTSPRACP*VLQSQA
Trigger: GGCCTGGCTCTGCAGAACCCAGGGGCACGCTCTGGG...GGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR-3UTR CCA 90 bp TGGAGGCGGGCAGTGTGCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCACCCCTCTCACAGAAGTaGCCGTGGAAGCCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: WRRAVCPLPGTWAPCSHPPLSQK*PWKPAG
Trigger: CCCTGCCGGCTTCCACGGCCACTTCTGTGAGAGGGG...TGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGCACACTGCCCGCCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR-3UTR GCA 90 bp CACAGTCACAGCGCTGGTGGCAGCCCTCTCCAAATGAACCTGGCTCACACCCCCGGCCGCAGCGGCAGGTaGCCGTGGCAGGCTCACACG +
Preference number: 2 (lower is better)
Translates to: HSHSAGGSPLQMNLAHTPGRSGR*PWQAHT
Trigger: CGTGTGAGCCTGCCACGGGCACCTGCCGCTGCGGCC...GGGGGTGTGAGCCAGGTTCATTTGGAGAGGGCTGCCACCAGCGCTGTGACTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR-3UTR CCA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCACCCTCTGGCTGGGACTaGAGAGGCGGGCTCCACGGG +
Preference number: 2 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSPSGWD*RGGLHG
Trigger: CCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGG...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR-3UTR CCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCAGGGTCCCCTCTGGCTaGGACTGGAGAGGCGGGCTC +
Preference number: 2 (lower is better)
Translates to: HTSLQERQVAGLSTALHGRVPSG*DWRGGL
Trigger: GAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCT...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR-3UTR TCA 90 bp GCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCACACAGTGACACTGCCCGTTACAGGTGGCTCCTaGGCGCCCTGGTGGGCAAAG +
Preference number: 2 (lower is better)
Translates to: ARFPARGPHVAIHTVTLPVTGGS*APWWAK
Trigger: CTTTGCCCACCAGGGCGCTCAGGAGCCACCTGTAAC...GGGCAGTGTCACTGTGTGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR-3UTR CCA 90 bp GCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCAGAGCGACAGGTTGCTaGGCTGTCCACAGCCCTCCA +
Preference number: 2 (lower is better)
Translates to: APAPTLAPTPVLSPTQSRRATGC*AVHSPP
Trigger: TGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCT...GCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR-3UTR CCA 90 bp CCGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCCACCAGCACAACCCCTaGCAGCCAGCCCCGTGGAAG +
Preference number: 2 (lower is better)
Translates to: PQSQCRVQLGPNWPLLQSHQHNP*QPAPWK
Trigger: CTTCCACGGGGCTGGCTGCCAGGGGTTGTGCTGGTG...GGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR CAA 90 bp GAGGCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTaGCTGGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: EASLLKATPASKSDR*LGCPQPSTALKGRA
Trigger: TGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR-3UTR TCA 90 bp GTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTAGAGGCATCGGCCACTaGTGGGGTCGCAGGGGGCTC +
Preference number: 2 (lower is better)
Translates to: VTVQGAAGPKLAPSAIQVRGIGH*WGRRGL
Trigger: GAGCCCCCTGCGACCCCATCAGTGGCCGATGCCTCT...AACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR-3UTR CCA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCCAGTACCAGGAGCTCTaGGCCCGTGAAGTGTCCTTC +
Preference number: 2 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSQYQEL*AREVSF
Trigger: GAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTG...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR-3UTR CCA 90 bp CGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAAGCAGCTGCCGTTGCTaGCGTGGCACAGGCCCCCAT +
Preference number: 2 (lower is better)
Translates to: RSHSAGCSWAQTGPFCNPSSCRC*RGTGPH
Trigger: ATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCT...TGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR-3UTR TCA 90 bp CCCGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCGCAGCCCTCTCCAAATaGACCTGGCTCACACCCCCT +
Preference number: 2 (lower is better)
Translates to: PAVTVQGAAGPKLAPSAIAALSK*TWLTPP
Trigger: AGGGGGTGTGAGCCAGGTTCATTTGGAGAGGGCTGC...GATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR-3UTR CCA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGGGCCAGGGTCCCCTCTaGCTGGGACTGGAGAGGCGG +
Preference number: 2 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLGQGPL*LGLERR
Trigger: CCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCC...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR-3UTR TCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTGGAGCTCTGGGCCCGTaGAGTGTCCTTCTCAGTGGT +
Preference number: 2 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPGALGP*SVLLSG
Trigger: ACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCC...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR-3UTR CCA 90 bp CAGTCTCTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCCCCTCTGGCTGGGACTaGAGAGGCGGGCTCCACGGG +
Preference number: 2 (lower is better)
Translates to: QSLGLSGNECSPSVLLNSPSGWD*RGGLHG
Trigger: CCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGG...GCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAGAGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR CCA 90 bp GTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTACGCCAAACCGGTTCTaGGGGCAGCCTCGCTCACAG +
Preference number: 2 (lower is better)
Translates to: VTVQGAAGPKLAPSAIQVTPNRF*GQPRSQ
Trigger: CTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGT...AACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR-3UTR GCA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGAGGACAGTGGCCCTGTaGCTGCACCTGCGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLRTVAL*LHLRLH
Trigger: GTGCAGGCGCAGGTGCAGGCACAGGGCCACTGTCCT...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR-3UTR GCA 90 bp CGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCATGGCAGGCTCACACGTaGTGTTGTTGTGGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: RSHSAGCSWAQTGPFCNPWQAHT*CCCGRS
Trigger: GCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCA...TGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR-3UTR CCA 90 bp CTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGGGGCCCCGGGTGCACTaGGAGGTCCCTGGGTGCACC +
Preference number: 2 (lower is better)
Translates to: LYVVSLYASLLFLGESPEGPRVH*EVPGCT
Trigger: GGTGCACCCAGGGACCTCCCAGTGCACCCGGGGCCC...CTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR CCA 90 bp CCCGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCTCACAGTCACAGCGCTaGTGGCAGCCCTCTCCAAAT +
Preference number: 2 (lower is better)
Translates to: PAVTVQGAAGPKLAPSAISQSQR*WQPSPN
Trigger: ATTTGGAGAGGGCTGCCACCAGCGCTGTGACTGTGA...GATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR-3UTR CCA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAAAGTGTCCTTCTCAGTaGTCACCAAAGGCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSKCPSQ*SPKARV
Trigger: GACCCTGGCCTTTGGTGACCACTGAGAAGGACACTT...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR-3UTR CCA 90 bp CTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCAGGTGCACCGTTATGCTaGCCGGGCCCCAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: LFTPPCYSWENLLSCIHSGAPLC*PGPREE
Trigger: CTCCTCCCTGGGGCCCGGCCAGCATAACGGTGCACC...TGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR CCA 90 bp GCAGCCCCAGCGTTCTCCTCAATAGCACTGGGAACTGAGATGAGTCCCAACTTCGCACTGGGAGGTCCCTaGGTGCACCGTTATGCTGGC +
Preference number: 2 (lower is better)
Translates to: AAPAFSSIALGTEMSPNFALGGP*VHRYAG
Trigger: GCCAGCATAACGGTGCACCCAGGGACCTCCCAGTGC...GAAGTTGGGACTCATCTCAGTTCCCAGTGCTATTGAGGAGAACGCTGGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR CCA 90 bp AGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTACAGGCACGTGCTGTTGTTGTaGCAGGAGCACTCCAGATGG +
Preference number: 2 (lower is better)
Translates to: SAGCSWAQTGPFCNPGYRHVLLL*QEHSRW
Trigger: CCATCTGGAGTGCTCCTGCCACAACAACAGCACGTG...CCTGTAACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR-3UTR CCA 90 bp CAGTCTCTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCAGAGCGACAGGTTGCTaGGCTGTCCACAGCCCTCCA +
Preference number: 2 (lower is better)
Translates to: QSLGLSGNECSPSVLLNSRATGC*AVHSPP
Trigger: TGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCT...GCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAGAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR CCA 90 bp CTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCACTGCCTGGAGGACAGTaGCCCTGTGCCTGCACCTGC +
Preference number: 2 (lower is better)
Translates to: LFTPPCYSWENLLSCIHSLPGGQ*PCACTC
Trigger: GCAGGTGCAGGCACAGGGCCACTGTCCTCCAGGCAG...TGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR TCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAAGGAGCTCTGGGCCCGTaGAGTGTCCTTCTCAGTGGT +
Preference number: 2 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKGALGP*SVLLSG
Trigger: ACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCC...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR-3UTR GCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAACCAAGAGCGACAGGTTaGTGGGCTGTCCACAGCCCT +
Preference number: 2 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKPRATG*WAVHSP
Trigger: AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGG...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR-3UTR GCA 90 bp CCCTTACCCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCGCAAAGGGCCCCGGGTaGACTGGGAGGTCCCTGGGT +
Preference number: 2 (lower is better)
Translates to: PLPISIHLSLYVVSLYASAKGPG*TGRSLG
Trigger: ACCCAGGGACCTCCCAGTGCACCCGGGGCCCTTTGC...GGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGGGTAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR CCA 90 bp CTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCACTGGGAAGTGTCCTTCTCAGTaGTCACCAAAGGCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: LGLSGNECSPSVLLNSTGKCPSQ*SPKARV
Trigger: GACCCTGGCCTTTGGTGACCACTGAGAAGGACACTT...CCCAGTGCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR GCA 90 bp CCCTTACCCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCAGGACAGTGGCCCTGTaGCTGCACCTGCGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: PLPISIHLSLYVVSLYASRTVAL*LHLRLH
Trigger: GTGCAGGCGCAGGTGCAGGCACAGGGCCACTGTCCT...GGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGGGTAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR GCA 90 bp CCCTTACCCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCGCCTCAGCCCATGAGTaGCAGGTGCTCGGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: PLPISIHLSLYVVSLYASASAHE*QVLGRA
Trigger: AGCCCTCCCGAGCACCTGGCACTCATGGGCTGAGGC...GGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGGGTAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR GCA 90 bp CTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGGCTGGTGAAATTGTCTaGCCTGGGGCCTCAGCTACC +
Preference number: 2 (lower is better)
Translates to: LYVVSLYASLLFLGESPEAGEIV*PGASAT
Trigger: GGTAGCTGAGGCCCCAGGGCAGACAATTTCACCAGC...CTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR GCA 90 bp AACATCACAGTTTTCTGGCTCTCCGTGTTTCTCACGTATAGTCTGAGGTCAATTTGGGAGGTCCCTGGGTaGACCGTTATGCTGGCCGGG +
Preference number: 2 (lower is better)
Translates to: NITVFWLSVFLTYSLRSIWEVPG*TVMLAG
Trigger: CCCGGCCAGCATAACGGTGCACCCAGGGACCTCCCA...AATTGACCTCAGACTATACGTGAGAAACACGGAGAGCCAGAAAACTGTGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR CCA 90 bp AACATCACAGTTTTCTGGCTCTCCGTGTTTCTCACGTATAGTCTGAGGTCAATTCGCCTGCACCCACACTaGCGCCCACACCTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: NITVFWLSVFLTYSLRSIRLHPH*RPHLSS
Trigger: TGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCG...AATTGACCTCAGACTATACGTGAGAAACACGGAGAGCCAGAAAACTGTGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR CCA 90 bp CTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGACTTCTTCACTTGTGTaGCACCCCCACCCCTGCAAA +
Preference number: 2 (lower is better)
Translates to: LYVVSLYASLLFLGESPETSSLV*HPHPCK
Trigger: TTTGCAGGGGTGGGGGTGCCACACAAGTGAAGAAGT...CTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR GCA 90 bp GCGTTTATTATGTGTGTTGAGAATGTTCAATATCCTCCTTCTTGCTGCTTGAAACCCTGTGCCTGCACCTaGGCCTGCACCCACACTGGC +
Preference number: 2 (lower is better)
Translates to: AFIMCVENVQYPPSCCLKPCACT*ACTHTG
Trigger: GCCAGTGTGGGTGCAGGCGCAGGTGCAGGCACAGGG...TTTCAAGCAGCAAGAAGGAGGATATTGAACATTCTCAACACACATAATAAACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR CCA 90 bp TATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCTACATAAATACGGGCTaGGCGACTTCCAGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: YLCTLSLFTPPCYSWENLYINTG*ATSSPR
Trigger: CCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTA...GAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR CCA 90 bp GCGTTTATTATGTGTGTTGAGAATGTTCAATATCCTCCTTCTTGCTGCTTGAAAGGTGCTCGGGAGGGCTaGTCTGTCCTCACCCAGGGA +
Preference number: 2 (lower is better)
Translates to: AFIMCVENVQYPPSCCLKGAREG*SVLTQG
Trigger: TCCCTGGGTGAGGACAGACCAGCCCTCCCGAGCACC...TTTCAAGCAGCAAGAAGGAGGATATTGAACATTCTCAACACACATAATAAACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR GCA 90 bp GCGTTTATTATGTGTGTTGAGAATGTTCAATATCCTCCTTCTTGCTGCTTGAAACTTCATTTCAAGGTATaGGTTTTCCACACTCCGTCT +
Preference number: 2 (lower is better)
Translates to: AFIMCVENVQYPPSCCLKLHFKV*VFHTPS
Trigger: AGACGGAGTGTGGAAAACGCATACCTTGAAATGAAG...TTTCAAGCAGCAAGAAGGAGGATATTGAACATTCTCAACACACATAATAAACGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR GCA 72 bp TGCAAAGGGCCCCGGGTGCACTGGGAGGTCCCTGGGTaGACCGTTATGCTGGCCGGGCCCCAGGGAGGAGCC +
Preference number: 3 (lower is better)
Translates to: CKGPRVHWEVPG*TVMLAGPQGGA
Trigger: GGCTCCTCCCTGGGGCCCGGCCAGCATAACGGTGCACCCAGGGACCTCCCAGTGCACCCGGGGCCCTTTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR GCA 72 bp AGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTaGCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGC +
Preference number: 3 (lower is better)
Translates to: SAAPSSPGHRSS*RCWRGTGPHFC
Trigger: GCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR-3UTR CAA 90 bp GCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCACACAGTGACACTGCCCCAGGAGCAGCTGCCGTaGCTGGCGTGGCACAGGCCC +
Preference number: 3 (lower is better)
Translates to: ARFPARGPHVAIHTVTLPQEQLP*LAWHRP
Trigger: GGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTG...GGGCAGTGTCACTGTGTGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR-3UTR CAA 90 bp GGGAGGTCCCTGGGTGCACCGTTATGCTGGCCGGGCCCCAGGGAGGAGCCCACATCCAAGAGCGACAGGTaGCTGGGCTGTCCACAGCCC +
Preference number: 3 (lower is better)
Translates to: GRSLGAPLCWPGPREEPTSKSDR*LGCPQP
Trigger: GGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGA...TGTGGGCTCCTCCCTGGGGCCCGGCCAGCATAACGGTGCACCCAGGGACCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR TCA 72 bp GGCCGTGGAAGCCGGCAGGGCAGAGGCATCGGCCACTaGTGGGGTCGCAGGGGGCTCCATGTTGACACCAGC +
Preference number: 3 (lower is better)
Translates to: GRGSRQGRGIGH*WGRRGLHVDTS
Trigger: GCTGGTGTCAACATGGAGCCCCCTGCGACCCCATCAGTGGCCGATGCCTCTGCCCTGCCGGCTTCCACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR GCA 72 bp AGGCCTGGCCATAGAAGCCGGGGCCGCAGCGGCAGGTaGCCGTGGCAGGCTCACACGTGCTGTTGTTGTGGC +
Preference number: 3 (lower is better)
Translates to: RPGHRSRGRSGR*PWQAHTCCCCG
Trigger: GCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTGCCGCTGCGGCCCCGGCTTCTATGGCCAGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR CCA 72 bp GGGTGCACTGGGAGGTCCCTGGGTGCACCGTTATGCTaGCCGGGCCCCAGGGAGGAGCCCACACAGAGTCCA +
Preference number: 3 (lower is better)
Translates to: GCTGRSLGAPLC*PGPREEPTQSP
Trigger: TGGACTCTGTGTGGGCTCCTCCCTGGGGCCCGGCCAGCATAACGGTGCACCCAGGGACCTCCCAGTGCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CCA 72 bp CCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGTTGCTaGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGG +
Preference number: 3 (lower is better)
Translates to: PSSPGHRSSCRC*RGTGPHFCRSR
Trigger: CCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTGTGGCCTGGGCTGGACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR GCA 72 bp GCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTaGTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAG +
Preference number: 3 (lower is better)
Translates to: AWHRPPFLQEQV*SQPTPNRFWGQ
Trigger: CTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR GCA 72 bp GGCCGCAGCGGCAGGTGCCCGTGGCAGGCTCACACGTaGTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGG +
Preference number: 3 (lower is better)
Translates to: GRSGRCPWQAHT*CCCGRSTPDGR
Trigger: CCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTGCCGCTGCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR GCA 72 bp AGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTaGAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACC +
Preference number: 3 (lower is better)
Translates to: SCRCWRGTGPHF*RSRCARSPRQT
Trigger: GGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR CCA 72 bp TCTCAGTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTaGGACTGGAGAGGCGGGCTCCACGGGACTGCCTCT +
Preference number: 3 (lower is better)
Translates to: SQWSPKARVPSG*DWRGGLHGTAS
Trigger: AGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCACTGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR CCA 72 bp CAGGGCCTAGCACCAAAAAGCCTGCCTGGAGGACAGTaGCCCTGTGCCTGCACCTGCGCCTGCACCCACACT +
Preference number: 3 (lower is better)
Translates to: QGLAPKSLPGGQ*PCACTCACTHT
Trigger: AGTGTGGGTGCAGGCGCAGGTGCAGGCACAGGGCCACTGTCCTCCAGGCAGGCTTTTTGGTGCTAGGCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR TCA 72 bp CTGGCCCCTTCTGCAATCCAGGTTACAGGTGGCTCCTaGGCGCCCTGGTGGGCAAAGGCAGAGACCGGTGAC +
Preference number: 3 (lower is better)
Translates to: LAPSAIQVTGGS*APWWAKAETGD
Trigger: GTCACCGGTCTCTGCCTTTGCCCACCAGGGCGCTCAGGAGCCACCTGTAACCTGGATTGCAGAAGGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR GCA 72 bp TCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTaGTGGGCTGTCCACAGCCCTCCACGGCCCTCAAAG +
Preference number: 3 (lower is better)
Translates to: SSRPHQPPRATG*WAVHSPPRPSK
Trigger: CTTTGAGGGCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR GCA 72 bp TCCAGGAGAAGTCAGCCTCAGCCCATGAGTGCCAGGTaGTCGGGAGGGCTGGTCTGTCCTCACCCAGGGAGT +
Preference number: 3 (lower is better)
Translates to: SRRSQPQPMSAR*SGGLVCPHPGS
Trigger: ACTCCCTGGGTGAGGACAGACCAGCCCTCCCGAGCACCTGGCACTCATGGGCTGAGGCTGACTTCTCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CCA 72 bp ACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTaGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGAC +
Preference number: 3 (lower is better)
Translates to: TRSSGPVKCPSQ*SPKARVPSGWD
Trigger: GTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR CCA 72 bp CCAAATGAACCTGGCTCACACCCCCTCTCACAGAAGTaGCCGTGGAAGCCGGCAGGGCAGAGGCATCGGCCA +
Preference number: 3 (lower is better)
Translates to: PNEPGSHPLSQK*PWKPAGQRHRP
Trigger: TGGCCGATGCCTCTGCCCTGCCGGCTTCCACGGCCACTTCTGTGAGAGGGGGTGTGAGCCAGGTTCATTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR CCA 72 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTaGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAA +
Preference number: 3 (lower is better)
Translates to: SRPHQPPRATGC*AVHSPPRPSKE
Trigger: TTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR CCA 72 bp CCGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTaGCCCCTTCTGCAATCCAGGTTACAGGTGGCTCCT +
Preference number: 3 (lower is better)
Translates to: PQSQCRVQLGPN*PLLQSRLQVAP
Trigger: AGGAGCCACCTGTAACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR-3UTR CAA 90 bp CCCGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCTCACACGTGCTGTTGTaGTGGCAGGAGCACTCCAGA +
Preference number: 3 (lower is better)
Translates to: PAVTVQGAAGPKLAPSAISHVLL*WQEHSR
Trigger: TCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGA...GATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR TCA 72 bp GTCACAGTCACAGCGCTGGTGGCAGCCCTCTCCAAATaGACCTGGCTCACACCCCCTCTCACAGAAGTGGCC +
Preference number: 3 (lower is better)
Translates to: VTVTALVAALSK*TWLTPPLTEVA
Trigger: GGCCACTTCTGTGAGAGGGGGTGTGAGCCAGGTTCATTTGGAGAGGGCTGCCACCAGCGCTGTGACTGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR CCA 72 bp CCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTaGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAA +
Preference number: 3 (lower is better)
Translates to: PRPSKEGQYQEL*AREVSFSVVTK
Trigger: TTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
3UTR TCA 72 bp TGCAGCCCCAGCGTTCTCCTCAATAGCACTGGGAACTaGGATGAGTCCCAACTTCTTCACTTGTGTGGCACC +
Preference number: 3 (lower is better)
Translates to: CSPSVLLNSTGN*DESQLLHLCGT
Trigger: GGTGCCACACAAGTGAAGAAGTTGGGACTCATCTCAGTTCCCAGTGCTATTGAGGAGAACGCTGGGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR TCA 72 bp TCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTaGGCTGTATCCACTCACCCCATCTGCTGGATGCTT +
Preference number: 3 (lower is better)
Translates to: SLRLPAIPGRIS*AVSTHPICWML
Trigger: AAGCATCCAGCAGATGGGGTGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR-3UTR CAA 90 bp CCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATGTGCAGCCCTCTCCATaGGCCACCCCACTCTGCAGA +
Preference number: 3 (lower is better)
Translates to: PFPFIYLCTLSLFTPPCYVQPSP*ATPLCR
Trigger: TCTGCAGAGTGGGGTGGCCAATGGAGAGGGCTGCAC...ATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CCA 72 bp TGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTaGGAGAATCTCCTGAGCTGTATCCACTCACCCCAT +
Preference number: 3 (lower is better)
Translates to: CTLSLFTPPCYS*ENLLSCIHSPH
Trigger: ATGGGGTGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR GCA 72 bp ATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTaGTATTCCTGGGAGAATCTCCTGAGCTGTATCCAC +
Preference number: 3 (lower is better)
Translates to: IYLCTLSLFTPP*YSWENLLSCIH
Trigger: GTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CCA 72 bp AAAAATGGCCGAGGCCTTGAAGGCCTAAGAATAACATaGACTTTGCATGCCTTTGATAGTTTAGCTGGATGT +
Preference number: 3 (lower is better)
Translates to: KNGRGLEGLRIT*TLHAFDSLAGC
Trigger: ACATCCAGCTAAACTATCAAAGGCATGCAAAGTCCATGTTATTCTTAGGCCTTCAAGGCCTCGGCCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CCA 72 bp AATATCTCAGAGCACCCTCCTGGCTTCTTTCTCTTCTaGCTGGAGAACGTCTCTAAGAGCATTTTAAAATCA +
Preference number: 3 (lower is better)
Translates to: NISEHPPGFFLF*LENVSKSILKS
Trigger: TGATTTTAAAATGCTCTTAGAGACGTTCTCCAGCCAGAAGAGAAAGAAGCCAGGAGGGTGCTCTGAGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp ATGGCAGGCGGCTCCGTAGCGCCCAGGGGGACAGGCCAGCTCGCAGTGCCGCCCGCCGGCAGCCAGCTCTaGCGTCCCGGGGGAGGCACT +
Preference number: 4 (lower is better)
Translates to: MAGGSVAPRGTGQLAVPPAGSQL*RPGGGT
Trigger: AGTGCCTCCCCCGGGACGTCAGAGCTGGCTGCCGGC...GGGCGGCACTGCGAGCTGGCCTGTCCCCCTGGGCGCTACGGAGCCGCCTGCCAT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp AGGCGGCTCCGTAGCGCCCAGGGGGACAGGCCAGCTCGCAGTGCCGCCCCGTCCCCGGGCGGACATCGTTaGTGGCAGCTGGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RRLRSAQGDRPARSAAPSPGGHR*WQLGPW
Trigger: CCACGGCCCCAGCTGCCAGCAACGATGTCCGCCCGG...GGACGGGGCGGCACTGCGAGCTGGCCTGTCCCCCTGGGCGCTACGGAGCCGCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp ATGGCAGGCGGCTCCGTAGCGCCCAGGGGGACAGGCCAGCTCGCAGTGCCGCCCTGCCTGCCGTCCTCCTaGAGCTGGAACCCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: MAGGSVAPRGTGQLAVPPCLPSS*SWNPGR
Trigger: CCGGCCCGGGTTCCAGCTCCAGGAGGACGGCAGGCA...GGGCGGCACTGCGAGCTGGCCTGTCCCCCTGGGCGCTACGGAGCCGCCTGCCAT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp GGCCAGCTCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGTTAGCGGCAGGCCCCCGTaGCAGAGTCGCAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: GQLAVPPRPAQATGAAAVSGRPP*QSRRSH
Trigger: GTGGGACCTGCGACTCTGTCACGGGGGCCTGCCGCT...AACGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GGCCAGCTCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGTTCGTCCTGGCAGCGGCTaGCGACGAAGCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GQLAVPPRPAQATGAAAVRPGSG*RRSQGG
Trigger: GCCTCCCTGGCTTCGTCGGCAGCCGCTGCCAGGACG...AACGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp AGGCGGCTCCGTAGCGCCCAGGGGGACAGGCCAGCTCGCAGTGCCGCCCCGTCCCCGCTTCCCGGCACGTaGGCCCCATGTAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: RRLRSAQGDRPARSAAPSPLPGT*APCSHP
Trigger: TGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGG...GGACGGGGCGGCACTGCGAGCTGGCCTGTCCCCCTGGGCGCTACGGAGCCGCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp GCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACGGGACTGCCTCTAGCGGCAGGCCCCCGTaGCAGAGTCGCAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: ARVPSGWDWRGGLHGTASSGRPP*QSRRSH
Trigger: GTGGGACCTGCGACTCTGTCACGGGGGCCTGCCGCT...AGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp TGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCCTCGCTCACAGCGGACGCCCACGGCGGGCAGGTaGGGTGGCAGAAGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: CSQPTPNRFWGQPRSQRTPTAGR*GGRSGR
Trigger: ACGGCCGCTTCTGCCACCTCACCTGCCCGCCGTGGG...CGTCCGCTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCGGCGGACACCGGCACTaGCCCGTGACCCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GVAQAPISAGAGVLAAHAGGHRH*PVTPWQ
Trigger: CTGCCACGGGGTCACGGGGCAGTGCCGGTGTCCGCC...GGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GGGAGGTCCCTGGGTGCACCGTTATGCTGGCCGGGCCCCAGGGAGGAGCCCACAGCTGGGCAGATCTCCTaGCAGCCCAGCCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: GRSLGAPLCWPGPREEPTAGQIS*QPSPQR
Trigger: CCGCTGGGGGCTGGGCTGCCAGGAGATCTGCCCAGC...TGTGGGCTCCTCCCTGGGGCCCGGCCAGCATAACGGTGCACCCAGGGACCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp TGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCCTCGCTCACAGCGGACGGCCCCAGTGACGTGGTaGCAGGCAGCGCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: CSQPTPNRFWGQPRSQRTAPVTW*QAAPGG
Trigger: CCCGCCTGGCGCTGCCTGCCACCACGTCACTGGGGC...CGTCCGCTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GGCCAGCTCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGTTACACGTGGGTGCAGTTaGGGCCGAAGCGGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: GQLAVPPRPAQATGAAAVTRGCS*GRSGPA
Trigger: CGCAGGGCCGCTTCGGCCCCAACTGCACCCACGTGT...AACGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp CAGGCCAGCTCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGCAGGGGGCTCCATGTTaGCACCAGCACAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: QASSQCRPVQPRPQEQLPQGAPC*HQHNPW
Trigger: CCAGGGGTTGTGCTGGTGTCAACATGGAGCCCCCTG...CGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCGGTAGCGGTAGTGCGTaGCCGCGACGCGCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSGSGSA*PRRAPG
Trigger: GCCTGGCGCGCGTCGCGGGCACGCACTACCGCTACC...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294599.8
CDS-3UTR GCA 90 bp ATGGCAGGCGGCTCCGTAGCGCCCAGGGGGACAGGCCAGCTCGCAGTGCCGCCCTTCGCCCCGCAACTCTaGCTCTTCCTCATCGGCCCC +
Preference number: 4 (lower is better)
Translates to: MAGGSVAPRGTGQLAVPPFAPQL*LFLIGP
Trigger: GGGGCCGATGAGGAAGAGGCAGAGTTGCGGGGCGAA...GGGCGGCACTGCGAGCTGGCCTGTCCCCCTGGGCGCTACGGAGCCGCCTGCCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp TGGAGGCGGGCAGTGTGCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCACGCCCACTGGGCAGGTaGATGCCTGCCAGCACCCCG +
Preference number: 4 (lower is better)
Translates to: WRRAVCPLPGTWAPCSHPRPLGR*MPASTP
Trigger: CGGGGTGCTGGCAGGCATGCACCTGCCCAGTGGGCG...TGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGCACACTGCCCGCCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGCGGACACCGGCACTaGCCCGTGACCCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: APAPTLAPTPVLSPTQSRGGHRH*PVTPWQ
Trigger: CTGCCACGGGGTCACGGGGCAGTGCCGGTGTCCGCC...GCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACCAGGCCAGCTCGCAGTaGCGCCCCGTCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: WSPKARVPSGWDWRGGLHQASSQ*RPVQPR
Trigger: CCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCCTG...GTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGGCAGGCGGCTCGGGCTaGTTCTGGGTTCCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGAGGSG*FWVPGG
Trigger: CCCGCCCGGAACCCAGAACCAGCCCGAGCCGCCTGC...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294599.8
CDS-3UTR CCA 90 bp GGCCAGCTCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGTTCAGCGGGCAGCGTGCTaGCATGCTGGGCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: GQLAVPPRPAQATGAAAVQRAAC*HAGQIS
Trigger: GGAGATCTGCCCAGCATGCCAGCACGCTGCCCGCTG...AACGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACGGGACTGCCTCTGCTGGGCACACGTCCTaGCAGCGGCTGCCGACGAAG +
Preference number: 4 (lower is better)
Translates to: ARVPSGWDWRGGLHGTASAGHTS*QRLPTK
Trigger: CTTCGTCGGCAGCCGCTGCCAGGACGTGTGCCCAGC...AGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CAGGCCAGCTCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGAGCTGCAGTGTCCGGTaGCTGGGTGGCAGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: QASSQCRPVQPRPQEQLPSCSVR*LGGSAH
Trigger: ATGGGCACTGCCACCCAGCCACCGGACACTGCAGCT...CGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACCCAGTCCAGCCGGCTaGGCAGAGGCAGCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPPSPAG*AEAAAR
Trigger: ACGGGCCGCTGCCTCTGCCCAGCCGGCTGGACTGGG...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCCCCAAAGCTGCCGGGTaGGCAGGCCTGCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: GVAQAPISAGAGVLAAHAPKAAG*AGLLAA
Trigger: GGCTGCGAGCAGGCCTGCCCACCCGGCAGCTTTGGG...GGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485002.6
3UTR CAA 72 bp CGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGTaGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RPVQPRPQEQLP*LAWHRPPFLQE
Trigger: CTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp CGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCTCCCACGGCGGGCAGGTaGGGTGGCAGAAGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: RPHLSSVQLRAAGRAGLPPTAGR*GGRSGR
Trigger: ACGGCCGCTTCTGCCACCTCACCTGCCCGCCGTGGG...AGGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp TGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCCTCGCTCACAGCGGACGAGGTGCAGGCCCCGCTaGCGTGGTCACAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CSQPTPNRFWGQPRSQRTRCRPR*RGHRLL
Trigger: GAGCAGCCTGTGACCACGTCAGCGGGGCCTGCACCT...CGTCCGCTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACGGGACTGCCTCTCCCGGAAGCCAGCCTTaGAGGAGCAGCTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: ARVPSGWDWRGGLHGTASPGSQP*RSSCHP
Trigger: GGGATGGCAGCTGCTCCTGCAAGGCTGGCTTCCGGG...AGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACCGTCCTGGCAGCGGCTaGCGACGAAGCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: WSPKARVPSGWDWRGGLHRPGSG*RRSQGG
Trigger: GCCTCCCTGGCTTCGTCGGCAGCCGCTGCCAGGACG...GTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GGCCAGCTCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGTTGGGACCATACCAGCCTaGTGGGCACACGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GQLAVPPRPAQATGAAAVGTIPA*WAHVLA
Trigger: TGCCAGGACGTGTGCCCAGCAGGCTGGTATGGTCCC...AACGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCACCCGGGGGCACAGCTaGAGTGTCCGGTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GVAQAPISAGAGVLAAHATRGHS*SVRWLG
Trigger: ACCCAGCCACCGGACACTGCAGCTGTGCCCCCGGGT...GGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTCCGGGCGGACATCCCTaGTCGCAGCCGGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTPGGHP*SQPEPV
Trigger: CACTGGCTCCGGCTGCGAGCAGGGATGTCCGCCCGG...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294599.8
CDS-3UTR GCA 90 bp TGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCCTCGCTCACAGCGGACGGGGCCGAAGCGGCCCTaGGGACAGGTGAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: CSQPTPNRFWGQPRSQRTGPKRP*GQVRLQ
Trigger: CTGCAACCTCACCTGTCCGCAGGGCCGCTTCGGCCC...CGTCCGCTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGCAGGCCAGCTCGCAGTaGCGCCCCGTCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HRPPFLQEQVCSQPTPNRQASSQ*RPVQPR
Trigger: CCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCCTG...CCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGAGTCACAGTGCAGGGTaGAGCTGGGCCCAAACTGGC +
Preference number: 4 (lower is better)
Translates to: QASSQCRPVQPRPQEQLPSHSAG*SWAQTG
Trigger: GCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACT...CGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGCCGGGTGGGCAGGCCTaGTCGCAGCCGGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: HRPPFLQEQVCSQPTPNRPGGQA*SQPEPV
Trigger: CACTGGCTCCGGCTGCGAGCAGGCCTGCCCACCCGG...CCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGCCGTCCTCCTGGAGCTaGAACCCGGGCCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGPSSWS*NPGRHW
Trigger: CCAGTGCCGGCCCGGGTTCCAGCTCCAGGAGGACGG...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCCCGTCCTCCTGGAGCTaGAACCCGGGCCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: APAPTLAPTPVLSPTQSRPSSWS*NPGRHW
Trigger: CCAGTGCCGGCCCGGGTTCCAGCTCCAGGAGGACGG...GCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCTGCGGCCGTAGAGCCCTaGGTCGCAGAGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RPHLSSVQLRAAGRAGLPAAVEP*VAEAGP
Trigger: GGGGCCTGCCTCTGCGACCCAGGGCTCTACGGCCGC...AGGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CAGGCCAGCTCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGTGTCCGGTGGCTGGGTaGCAGTGCCCATCATTGGCA +
Preference number: 4 (lower is better)
Translates to: QASSQCRPVQPRPQEQLPCPVAG*QCPSLA
Trigger: TGCCAATGATGGGCACTGCCACCCAGCCACCGGACA...CGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGCCCAGTCCAGCCGGCTaGGCAGAGGCAGCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: HRPPFLQEQVCSQPTPNRPSPAG*AEAAAR
Trigger: ACGGGCCGCTGCCTCTGCCCAGCCGGCTGGACTGGG...CCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCTGCCCCAGTGACGTGGTaGCAGGCAGCGCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RPHLSSVQLRAAGRAGLPAPVTW*QAAPGG
Trigger: CCCGCCTGGCGCTGCCTGCCACCACGTCACTGGGGC...AGGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACAGGCCCCAGTGACGTaGTGGCAGGCAGCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPQAPVT*WQAAPG
Trigger: GCCTGGCGCTGCCTGCCACCACGTCACTGGGGCCTG...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCTCCCGAGGAACCCAGTaGGGCAGCGGCAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGSRGTQ*GSGRPP
Trigger: CGGGGGCCTGCCGCTGCCCCACTGGGTTCCTCGGGA...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCATCCCGAGGAACCCAGTaGGGCAGCGGCAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: AVAGVAQAPISAGAGVLASRGTQ*GSGRPP
Trigger: CGGGGGCCTGCCGCTGCCCCACTGGGTTCCTCGGGA...TGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTGGCCAGGGTCCCCTCTaGCTGGGACTGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTGQGPL*LGLERR
Trigger: CCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCC...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACCCCAAAGCTGCCGGGTaGGCAGGCCTGCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: WSPKARVPSGWDWRGGLHPKAAG*AGLLAA
Trigger: GGCTGCGAGCAGGCCTGCCCACCCGGCAGCTTTGGG...GTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GGCCAGCTCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGTTAGCCCCCGTTGGCGTTaGCACACTCACCCACATCCG +
Preference number: 4 (lower is better)
Translates to: GQLAVPPRPAQATGAAAVSPRWR*HTHPHP
Trigger: CGGATGTGGGTGAGTGTGCCAACGCCAACGGGGGCT...AACGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCCGCAGCCATCGGCACTaGGCCGGTAGCCGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGRSHRH*AGSRRS
Trigger: GCTACGCCGGCTACCGGCTCAGTGCCGATGGCTGCG...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp TGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGGCTCCGTAGCGCCCAGAGCGGCAGGCCCCAGTaGCGTGGTGGCAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: CCCCGRSTPDGRRLRSAQSGRPQ*RGGRQR
Trigger: GCGCTGCCTGCCACCACGTCACTGGGGCCTGCCGCT...CTGGGCGCTACGGAGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp CCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCGCAGCCGGAGCCAGTaGAGCCAGGGGGACAGCGGC +
Preference number: 4 (lower is better)
Translates to: PQGHTSLQERQVAGLSTARSRSQ*SQGDSG
Trigger: GCCGCTGTCCCCCTGGCTTCACTGGCTCCGGCTGCG...GGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCGAGGACCAACCGCGCTaGGCCCTAAGCCGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: PQGHTSLQERQVAGLSTAEDQPR*ALSRRP
Trigger: CGGCCGCCGGCTTAGGGCGCAGCGCGGTTGGTCCTC...GGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294599.8
CDS-3UTR GCA 90 bp GGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCCAGCACTGGTGTGGCTaGAGCCATGGGAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GVAQAPISAGAGVLAAHAQHWCG*SHGSSR
Trigger: GCGGCTGCTCCCATGGCTGCAGCCACACCAGTGCTG...GGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCAGCCGCGGGGACATGTaGACAGGGGCCCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: APTPVLSPTQSRGESGTSSRGDM*TGAQHW
Trigger: CCAGTGCTGGGCCCCTGTGCACATGTCCCCGCGGCT...GGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACGGGACTGCCTCTGACTGCGTGTGGGGCTaGACACACTGGCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: ARVPSGWDWRGGLHGTASDCVWG*THWHSS
Trigger: GGAGGAGTGCCAGTGTGTGCAGCCCCACACGCAGTC...AGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCAGCCCAGCTCACACTCTaGCTGACAGCGCTCGCCCCG +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPAQLTL*LTALAP
Trigger: CGGGGCGAGCGCTGTCAGGCAGAGTGTGAGCTGGGC...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTCCCTGGGGACACTGCTaGTCGCACCGCGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSPWGHC*SHRGPT
Trigger: CGTGGGCCCGCGGTGCGAGCAGCAGTGTCCCCAGGG...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp AGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTCCCTGGGGACACTGCTaGTCGCACCGCGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: SSCRCWRGTGPHFCRSRCPWGHC*SHRGPT
Trigger: CGTGGGCCCGCGGTGCGAGCAGCAGTGTCCCCAGGG...ACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCTCCGGCCGGGCAGGCATaGTCGCAGAAGGTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: RPHLSSVQLRAAGRAGLPPAGQA*SQKVPL
Trigger: GAGGGGCACCTTCTGCGAGCATGCCTGCCCGGCCGG...AGGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCAGGCAACCGCCGCTGTaGCGGCAGCCAGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: APAPTLAPTPVLSPTQSRRQPPL*RQPALT
Trigger: CGTCAGAGCTGGCTGCCGGCACAGCGGCGGTTGCCT...GCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCAAGGAGCAGCTGCCGTTaGTGGCGTGGCACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPRSSCR*WRGTGP
Trigger: GGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCT...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCAGGAGCAGCTGCCGTTaGTGGCGTGGCACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSRSSCR*WRGTGP
Trigger: GGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCT...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCACAGGCCAGCTCGCAGTaGCGCCCCGTCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSQASSQ*RPVQPR
Trigger: CCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCCTG...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTGGCCGCAGCGGCAGGTaGCCGTGGCAGGCTCACACG +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSGRSGR*PWQAHT
Trigger: CGTGTGAGCCTGCCACGGGCACCTGCCGCTGCGGCC...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGCCCTGTGCCTGCACCTaGGCCTGCACCCACACTGGC +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGPCACT*ACTHTG
Trigger: GCCAGTGTGGGTGCAGGCGCAGGTGCAGGCACAGGG...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCGCCTCCGCCTCCACGTaGGCCATAGGACGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: APTPVLSPTQSRGESGTSASAST*AIGRSH
Trigger: GTGGCTGCGTCCTATGGCGCACGTGGAGGCGGAGGC...GGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCCACCGCGCGCCCCGCTaGCCTCGCCTCTTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: APAPTLAPTPVLSPTQSRHRAPR*PRLFKE
Trigger: TTCCTTGAAGAGGCGAGGGCAGCGGGGCGCGCGGTG...GCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCCCCTCCTCGTCGGGCTaGTGCATCCACCCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: APAPTLAPTPVLSPTQSRPSSSG*CIHPRQ
Trigger: CTGCCGAGGGTGGATGCAGCAGCCCGACGAGGAGGG...GCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CAGGCCAGCTCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGGGACACTGGCACATCTaGGCACAGTCCTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: QASSQCRPVQPRPQEQLPGHWHI*AQSSPK
Trigger: CTTTGGGGAGGACTGTGCGCAGATGTGCCAGTGTCC...CGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACTGGGTGCACCGTTATaGTGGCCGGGCCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPLGAPL*WPGPRE
Trigger: CTCCCTGGGGCCCGGCCAGCATAACGGTGCACCCAG...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCGCAAAGGGCCCCGGGTaGACTGGGAGGTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSAKGPG*TGRSLG
Trigger: ACCCAGGGACCTCCCAGTGCACCCGGGGCCCTTTGC...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTGGCTCGGGCTGGTTCTaGGTTCCGGGCGGGCGCGCA +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSGSGWF*VPGGRA
Trigger: TGCGCGCCCGCCCGGAACCCAGAACCAGCCCGAGCC...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294599.8
CDS-3UTR CCA 90 bp CGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCTTGCCTGCCGTCCTCCTaGAGCTGGAACCCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RPHLSSVQLRAAGRAGLPCLPSS*SWNPGR
Trigger: CCGGCCCGGGTTCCAGCTCCAGGAGGACGGCAGGCA...AGGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCCTCGCTCACAGCGGACGACAGGGGCCCAGCACTaGTGTGGCTGCAGCCATGGG +
Preference number: 4 (lower is better)
Translates to: CSQPTPNRFWGQPRSQRTTGAQH*CGCSHG
Trigger: CCCATGGCTGCAGCCACACCAGTGCTGGGCCCCTGT...CGTCCGCTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACGCCAGGTTGGTGCAGTaGTGCTCGCAGCCGCCACGG +
Preference number: 4 (lower is better)
Translates to: WSPKARVPSGWDWRGGLHARLVQ*CSQPPR
Trigger: CCGTGGCGGCTGCGAGCACCACTGCACCAACCTGGC...GTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TGGAGGCGGGCAGTGTGCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCATGCGGCAGCTCGTCCTaGAGCACGGCAATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WRRAVCPLPGTWAPCSHPCGSSS*STAMWG
Trigger: GCCCCACATTGCCGTGCTCCAGGACGAGCTGCCGCA...TGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGCACACTGCCCGCCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GGCAGGTGCCCGTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGCGGCCGTAGAGCCCTaGGTCGCAGAGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GRCPWQAHTCCCCGRSTPAAVEP*VAEAGP
Trigger: GGGGCCTGCCTCTGCGACCCAGGGCTCTACGGCCGC...TGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCGCTGGGCAGATCTCCTaGCAGCCCAGCCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGAGQIS*QPSPQR
Trigger: CCGCTGGGGGCTGGGCTGCCAGGAGATCTGCCCAGC...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TGGAGGCGGGCAGTGTGCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCAGGCCCAAAGTGGCCCTaGGGACACTGCTGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: WRRAVCPLPGTWAPCSHPGPKWP*GHCCSH
Trigger: GTGCGAGCAGCAGTGTCCCCAGGGCCACTTTGGGCC...TGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGCACACTGCCCGCCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGCAGCTGTTCACAGCCTaGCCCATACCGCCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGQLFTA*PIPPGR
Trigger: CCGCCCGGGCGGTATGGGCCAGGCTGTGAACAGCTG...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp ATCCACACAGTGACACTGCCCACTGACAGGGTCGCAGTCAGCCCCACCCCCGCAAGCGGCAGGCCCCCGTaGCCGCATCACAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: IHTVTLPTDRVAVSPTPASGRPP*PHHRSP
Trigger: GGGGCTCCTGTGATGCGGCCACGGGGGCCTGCCGCT...TGCGGGGGTGGGGCTGACTGCGACCCTGTCAGTGGGCAGTGTCACTGTGTGGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GCCTCAGCCCATGAGTGCCAGGTGCTCGGGAGGGCTGGTCTGTCCTCACCCAGGACACGTGGGTGCAGTTaGGGCCGAAGCGGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: ASAHECQVLGRAGLSSPRTRGCS*GRSGPA
Trigger: CGCAGGGCCGCTTCGGCCCCAACTGCACCCACGTGT...CCTGGGTGAGGACAGACCAGCCCTCCCGAGCACCTGGCACTCATGGGCTGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACGGGACTGCCTCTCACCTTCCCGGCACGTaGGCCCCATGTAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: ARVPSGWDWRGGLHGTASHLPGT*APCSHP
Trigger: TGGATGGCTACATGGGGCCCACGTGCCGGGAAGGTG...AGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGGGGATGTGGGTCTGCTaGAGGCGGGCAGTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGGMWVC*RRAVCP
Trigger: CGGGCACACTGCCCGCCTCCAGCAGACCCACATCCC...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCCACCGCTCCGGGATGTaGGTCTGCTGGAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: APTPVLSPTQSRGESGTSHRSGM*VCWRRA
Trigger: TGCCCGCCTCCAGCAGACCCACATCCCGGAGCGGTG...GGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCCCCTCTGGCTGGGACTaGAGAGGCGGGCTCCACGGG +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGPSGWD*RGGLHG
Trigger: CCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGG...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCAGGGTCCCCTCTGGCTaGGACTGGAGAGGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSRVPSG*DWRGGL
Trigger: GAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCT...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGCCCGTAGGTGTGGGCTaGGCAGGTCTCGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGPVGVG*AGLGTA
Trigger: CGCTGTGCCGAGACCTGCCCAGCCCACACCTACGGG...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTGGTGCACCGTTATGCTaGCCGGGCCCCAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTGAPLC*PGPREE
Trigger: CTCCTCCCTGGGGCCCGGCCAGCATAACGGTGCACC...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp TGGAGGCGGGCAGTGTGCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCACCGCACAGCCCCCGTTaGCGTTGGCACACTCACCCA +
Preference number: 4 (lower is better)
Translates to: WRRAVCPLPGTWAPCSHPPHSPR*RWHTHP
Trigger: TGGGTGAGTGTGCCAACGCCAACGGGGGCTGTGCGG...TGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGCACACTGCCCGCCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp TCACAGAAGTGGCCGTGGAAGCCGGCAGGGCAGAGGCATCGGCCACTGATGGGGAGAGGCAGGCCCCGGTaGCAAGGTGGCAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SQKWPWKPAGQRHRPLMGRGRPR*QGGRGL
Trigger: GAGGCCCCTGCCACCTTGCCACCGGGGCCTGCCTCT...CCCCATCAGTGGCCGATGCCTCTGCCCTGCCGGCTTCCACGGCCACTTCTGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp TGGAGGCGGGCAGTGTGCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCAAGGACCCCTGGGTGTTaGGGCAGCCATGGGCACACT +
Preference number: 4 (lower is better)
Translates to: WRRAVCPLPGTWAPCSHPRTPGC*GSHGHT
Trigger: AGTGTGCCCATGGCTGCCTCAACACCCAGGGGTCCT...TGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGCACACTGCCCGCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCAAGCTCACACTCTGCCTaGCAGCGCTCGCCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPSSHSA*QRSPRK
Trigger: CTTCCGGGGCGAGCGCTGTCAGGCAGAGTGTGAGCT...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTGCCGGCAGCCAGCTCTaGCGTCCCGGGGGAGGCACT +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPAGSQL*RPGGGT
Trigger: AGTGCCTCCCCCGGGACGTCAGAGCTGGCTGCCGGC...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp TTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCACACAGGCCCCCGTTaGGGCAACCGCCGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: FLQEQVCSQPTPNRFWGQHTGPR*GNRRCA
Trigger: GGCACAGCGGCGGTTGCCTCAACGGGGGCCTGTGTG...CTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTAGCGGCAGGCCCCAGTaGCGTGGTGGCAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCSGRPQ*RGGRQR
Trigger: GCGCTGCCTGCCACCACGTCACTGGGGCCTGCCGCT...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp CAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGGCTCCGCAGCCGGAGCCAGTaGAGCCAGGGGGACAGCGGC +
Preference number: 4 (lower is better)
Translates to: QAHTCCCCGRSTPDGRRLRSRSQ*SQGDSG
Trigger: GCCGCTGTCCCCCTGGCTTCACTGGCTCCGGCTGCG...GAGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp CAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGACCCTCGGCAGCACCTaGGCACGGTCCGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: QSQCRVQLGPNWPLLQSRTLGST*ARSGPP
Trigger: CGGAGGCCCGGACCGTGCTCAGGTGCTGCCGAGGGT...CCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp TGGAGGCGGGCAGTGTGCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCAGTGTTCACGCACCGGTaGTGGCAGCCACCGTTGTGG +
Preference number: 4 (lower is better)
Translates to: WRRAVCPLPGTWAPCSHPVFTHR*WQPPLW
Trigger: CCACAACGGTGGCTGCCAGCACCGGTGCGTGAACAC...TGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGCACACTGCCCGCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACGGGACTGCCTCTACACTGGGCCAGCCCTaGGGCACATTCGTCCACATC +
Preference number: 4 (lower is better)
Translates to: ARVPSGWDWRGGLHGTASTLGQP*GTFVHI
Trigger: GATGTGGACGAATGTGCCGCAGGGCTGGCCCAGTGT...AGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGCAGCACTGGTGTGGCTaGAGCCATGGGAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGQHWCG*SHGSSR
Trigger: GCGGCTGCTCCCATGGCTGCAGCCACACCAGTGCTG...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCAGGTTGGTGCAGTGGTaGTCGCAGCCGCCACGGCTG +
Preference number: 4 (lower is better)
Translates to: APAPTLAPTPVLSPTQSRRLVQW*SQPPRL
Trigger: CAGCCGTGGCGGCTGCGAGCACCACTGCACCAACCT...GCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCAGCCGGCCAGGTTGGTaGAGTGGTGCTCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGSRPGW*SGARSR
Trigger: GCGGCTGCGAGCACCACTGCACCAACCTGGCCGGCT...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CTCCATGTTGACACCAGCACAACCCCTGGCAGCCAGCCCCGTGGAAGCCAGGGGAGCCGGCCAGGTTGGTaGAGTGGTGCTCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LHVDTSTTPGSQPRGSQGSRPGW*SGARSR
Trigger: GCGGCTGCGAGCACCACTGCACCAACCTGGCCGGCT...CCCCTGGCTTCCACGGGGCTGGCTGCCAGGGGTTGTGCTGGTGTCAACATGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CAGGAGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGCTCCTCCAGGGGGCTaGAGCCCCTACGGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: QEQLPLLAWHRPPFLQEQAPPGG*SPYGPR
Trigger: ACGAGGACCGTAGGGGCTGCAGCCCCCTGGAGGAGC...CTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGAGGTCCCTCCGTTCCTaGAGTCATCACAGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: QASSQCRPVQPRPQEQLPRSLRS*SHHRSS
Trigger: GCTTGACCTGTGATGACTGCAGGAACGGAGGGACCT...CGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp AGGCGGCTCCGTAGCGCCCAGGGGGACAGGCCAGCTCGCAGTGCCGCCCCGTCCCCCGGTTGGCACAGTTaGATTTCTTGCGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: RRLRSAQGDRPARSAAPSPGWHS*ISCDSA
Trigger: AGCACTGTCGCAAGAAATGCAACTGTGCCAACCGGG...GGACGGGGCGGCACTGCGAGCTGGCCTGTCCCCCTGGGCGCTACGGAGCCGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GGCCAGCTCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGTTCTCTTGTCACAGGACTaGGTGTGGGGCTGCACACAC +
Preference number: 4 (lower is better)
Translates to: GQLAVPPRPAQATGAAAVLLSQD*VWGCTH
Trigger: GTGTGTGCAGCCCCACACGCAGTCCTGTGACAAGAG...AACGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCGCCCAGCTCACACTCTaGCTGACAGCGCTCGCCCCG +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGAQLTL*LTALAP
Trigger: CGGGGCGAGCGCTGTCAGGCAGAGTGTGAGCTGGGC...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCGGGCAGGTGCATGCCTaGCAGCACCCCGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGGQVHA*QHPGPK
Trigger: CTTTGGGCCGGGGTGCTGGCAGGCATGCACCTGCCC...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp TCACAGAAGTGGCCGTGGAAGCCGGCAGGGCAGAGGCATCGGCCACTGATGGGGGGGCAGGTGCATGCCTaGCAGCACCCCGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SQKWPWKPAGQRHRPLMGGQVHA*QHPGPK
Trigger: CTTTGGGCCGGGGTGCTGGCAGGCATGCACCTGCCC...CCCCATCAGTGGCCGATGCCTCTGCCCTGCCGGCTTCCACGGCCACTTCTGTGA
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp TGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCCTCGCTCACAGCGGACGAGTTGCAGGGGTGGCTaGAGTCAGGTCCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: CSQPTPNRFWGQPRSQRTSCRGG*SQVPSA
Trigger: GGCACTGGGGACCTGACTGCAGCCACCCCTGCAACT...CGTCCGCTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCATGCTCGCAGAAGGTaGCCCTCCAGCCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PQGHTSLQERQVAGLSTAHARRR*PSSRPG
Trigger: GCCCGGCCGGCTGGAGGGGCACCTTCTGCGAGCATG...GGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp TTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCCGGCCGGGCAGGCATaGTCGCAGAAGGTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: FLQEQVCSQPTPNRFWGQPAGQA*SQKVPL
Trigger: GAGGGGCACCTTCTGCGAGCATGCCTGCCCGGCCGG...CTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp TGGAGGCGGGCAGTGTGCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCACTCCGGCGGTGCAGTTaGAGGCACTGCGACAGTCCA +
Preference number: 4 (lower is better)
Translates to: WRRAVCPLPGTWAPCSHPLRRCS*RHCDSP
Trigger: TGGACTGTCGCAGTGCCTGCAACTGCACCGCCGGAG...TGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGCACACTGCCCGCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACCCACACACGTGGGTaGAGTTGGGGCCGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGTHTRG*SWGRSG
Trigger: GCCGCTTCGGCCCCAACTGCACCCACGTGTGTGGGT...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCACCCACACACGTGGGTaGAGTTGGGGCCGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: APTPVLSPTQSRGESGTSTHTRG*SWGRSG
Trigger: GCCGCTTCGGCCCCAACTGCACCCACGTGTGTGGGT...GGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp TGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGGCTCCGTAGCGCCCAGTCGCAGGCCGCCCCCTaGCCACACCCACACACGTGG +
Preference number: 4 (lower is better)
Translates to: CCCCGRSTPDGRRLRSAQSQAAP*PHPHTW
Trigger: CCACGTGTGTGGGTGTGGGCAGGGGGCGGCCTGCGA...CTGGGCGCTACGGAGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCTCCGGGATGTGGGTCTaGTGGAGGCGGGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: APAPTLAPTPVLSPTQSRSGMWV*WRRAVC
Trigger: GCACACTGCCCGCCTCCAGCAGACCCACATCCCGGA...GCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCCGTGCCCCTGGGTTCTaGAGAGCCAGGCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGRAPGF*RARPGG
Trigger: GCCTCCTGGCCTGGCTCTGCAGAACCCAGGGGCACG...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTAGGACAGTGGCCCTGTaGCTGCACCTGCGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTRTVAL*LHLRLH
Trigger: GTGCAGGCGCAGGTGCAGGCACAGGGCCACTGTCCT...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACAGGACAGTGGCCCTGTaGCTGCACCTGCGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: WSPKARVPSGWDWRGGLHRTVAL*LHLRLH
Trigger: GTGCAGGCGCAGGTGCAGGCACAGGGCCACTGTCCT...GTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GCCTCAGCCCATGAGTGCCAGGTGCTCGGGAGGGCTGGTCTGTCCTCACCCAGGAGTCCTCCCCAAAGCTaGCGGGTGGGCAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ASAHECQVLGRAGLSSPRSPPQS*RVGRPA
Trigger: AGCAGGCCTGCCCACCCGGCAGCTTTGGGGAGGACT...CCTGGGTGAGGACAGACCAGCCCTCCCGAGCACCTGGCACTCATGGGCTGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GCCTCAGCCCATGAGTGCCAGGTGCTCGGGAGGGCTGGTCTGTCCTCACCCAGGGCCTCAGCCCATGAGTaGCAGGTGCTCGGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ASAHECQVLGRAGLSSPRASAHE*QVLGRA
Trigger: AGCCCTCCCGAGCACCTGGCACTCATGGGCTGAGGC...CCTGGGTGAGGACAGACCAGCCCTCCCGAGCACCTGGCACTCATGGGCTGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCAGGCCCCGGACCACCTaGCACCTGTGCATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSRPRTT*HLCMQL
Trigger: CAGCTGCATGCACAGGTGCCAGGTGGTCCGGGGCCT...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGGGCCCAGCACTGGTGTaGCTGCAGCCATGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGGPALV*LQPWEQ
Trigger: CTGCTCCCATGGCTGCAGCCACACCAGTGCTGGGCC...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGCCCAGCACTGGTGTaGCTGCAGCCATGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: APAPTLAPTPVLSPTQSRGPALV*LQPWEQ
Trigger: CTGCTCCCATGGCTGCAGCCACACCAGTGCTGGGCC...GCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCACACAGTGACACTGCCCAGGAGCCGGCCAGGTTaGTGCAGTGGTGCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: ARFPARGPHVAIHTVTLPRSRPG*CSGARS
Trigger: GCTGCGAGCACCACTGCACCAACCTGGCCGGCTCCT...GGGCAGTGTCACTGTGTGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCTGCGGCAGCTCGTCCTaGAGCACGGCAATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: APAPTLAPTPVLSPTQSRCGSSS*STAMWG
Trigger: GCCCCACATTGCCGTGCTCCAGGACGAGCTGCCGCA...GCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTGCGGCCGTAGAGCCCTaGGTCGCAGAGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCAAVEP*VAEAGP
Trigger: GGGGCCTGCCTCTGCGACCCAGGGCTCTACGGCCGC...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAGCGTGCTGGCATGCTaGGCAGATCTCCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GVAQAPISAGAGVLAAHASVLAC*ADLLAA
Trigger: GGCTGCCAGGAGATCTGCCCAGCATGCCAGCACGCT...GGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCCAGCGGGCAGCGTGCTaGCATGCTGGGCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: APTPVLSPTQSRGESGTSQRAAC*HAGQIS
Trigger: GGAGATCTGCCCAGCATGCCAGCACGCTGCCCGCTG...GGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp ATGGCAGGCGGCTCCGTAGCGCCCAGGGGGACAGGCCAGCTCGCAGTGCCGCCCGTATCACAGGCTCTCTaGCAGCTAAAGCCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: MAGGSVAPRGTGQLAVPPVSQAL*QLKPVH
Trigger: GTGGACCGGCTTTAGCTGCCAGAGAGCCTGTGATAC...GGGCGGCACTGCGAGCTGGCCTGTCCCCCTGGGCGCTACGGAGCCGCCTGCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCCAGGCCCCGCTGACGTaGTCACAGGCTGCTCCATGC +
Preference number: 4 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSQAPLT*SQAAPC
Trigger: GCATGGAGCAGCCTGTGACCACGTCAGCGGGGCCTG...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCCAGGCCCCGCTGACGTaGTCACAGGCTGCTCCATGC +
Preference number: 4 (lower is better)
Translates to: APTPVLSPTQSRGESGTSQAPLT*SQAAPC
Trigger: GCATGGAGCAGCCTGTGACCACGTCAGCGGGGCCTG...GGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCACAGGCCCCAGTGACGTaGTGGCAGGCAGCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSQAPVT*WQAAPG
Trigger: GCCTGGCGCTGCCTGCCACCACGTCACTGGGGCCTG...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGAGCAGCTGCCGTTGCTaGCGTGGCACAGGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGSSCRC*RGTGPH
Trigger: ATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCT...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTAGCGGCAGGTGCCCGTaGCAGGCTCACACGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTSGRCP*QAHTCC
Trigger: ACAGCACGTGTGAGCCTGCCACGGGCACCTGCCGCT...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCGGGATGTGGGTCTGCTaGAGGCGGGCAGTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGGMWVC*RRAVCP
Trigger: CGGGCACACTGCCCGCCTCCAGCAGACCCACATCCC...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCCGCCTGCACCCACACTaGCGCCCACACCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSRLHPH*RPHLSS
Trigger: TGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCG...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCCTCAGCCCATGAGTGCCAGGTGCTCGGGAGGGCTGGTCTGTCCTCACCCAGGCGCCTGCACCCACACTaGCGCCCACACCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ASAHECQVLGRAGLSSPRRLHPH*RPHLSS
Trigger: TGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCG...CCTGGGTGAGGACAGACCAGCCCTCCCGAGCACCTGGCACTCATGGGCTGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCCTGCCTGGAGGACAGTaGCCCTGTGCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: APAPTLAPTPVLSPTQSRLPGGQ*PCACTC
Trigger: GCAGGTGCAGGCACAGGGCCACTGTCCTCCAGGCAG...GCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACTGCTCAGCACACACGTaGGGCATGCCGGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WSPKARVPSGWDWRGGLHCSAHT*GMPGCS
Trigger: GCTGCAGCCCGGCATGCCCCACGTGTGTGCTGAGCA...GTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCACCCGTAGGTGTGGGCTaGGCAGGTCTCGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: AVAGVAQAPISAGAGVLAPVGVG*AGLGTA
Trigger: CGCTGTGCCGAGACCTGCCCAGCCCACACCTACGGG...TGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp AGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGTCCCGGTGGCAGGGTaGCAGGCCGGGTTCTCACCG +
Preference number: 4 (lower is better)
Translates to: SSCRCWRGTGPHFCRSRCVPVAG*QAGFSP
Trigger: CGGTGAGAACCCGGCCTGCCACCCTGCCACCGGGAC...ACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CGTGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGGCTCCGTAGCGCCCATGAGCAGGTCCCGGTaGCAGGGTGGCAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: RAVVVAGALQMAGGSVAPMSRSR*QGGRPG
Trigger: ACCCGGCCTGCCACCCTGCCACCGGGACCTGCTCAT...GGGCGCTACGGAGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCCCCCTCTCACAGAAGTaGCCGTGGAAGCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: APTPVLSPTQSRGESGTSPLSQK*PWKPAG
Trigger: CCCTGCCGGCTTCCACGGCCACTTCTGTGAGAGGGG...GGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CAA 72 bp CGGCAGGTGCCCGTGGCAGGCTCACACGTGCTGTTGTaGTGGCAGGAGCACTCCAGATGGCAGGCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RQVPVAGSHVLL*WQEHSRWQAAP
Trigger: CGGAGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCAAGGACCCCTGGGTGTTaGGGCAGCCATGGGCACACT +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPRTPGC*GSHGHT
Trigger: AGTGTGCCCATGGCTGCCTCAACACCCAGGGGTCCT...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp GGGAGGTCCCTGGGTGCACCGTTATGCTGGCCGGGCCCCAGGGAGGAGCCCACAAAGTCTCATTGCAGATaGGCCCAGTCCAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GRSLGAPLCWPGPREEPTKSHCR*AQSSPR
Trigger: CCGAGGGCTGGACTGGGCTCATCTGCAATGAGACTT...TGTGGGCTCCTCCCTGGGGCCCGGCCAGCATAACGGTGCACCCAGGGACCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCAGCTCACACTCTGCCTaGCAGCGCTCGCCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGSSHSA*QRSPRK
Trigger: CTTCCGGGGCGAGCGCTGTCAGGCAGAGTGTGAGCT...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTCAGGCTGCTCCATGCTaGCACTGGCACCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTQAAPC*HWHRCS
Trigger: TGAGCAGCGGTGCCAGTGTCAGCATGGAGCAGCCTG...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp GCCTCAGCCCATGAGTGCCAGGTGCTCGGGAGGGCTGGTCTGTCCTCACCCAGGCAGGCTGCTCCATGCTaGCACTGGCACCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ASAHECQVLGRAGLSSPRQAAPC*HWHRCS
Trigger: TGAGCAGCGGTGCCAGTGTCAGCATGGAGCAGCCTG...CCTGGGTGAGGACAGACCAGCCCTCCCGAGCACCTGGCACTCATGGGCTGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCACACAGGCCCCCGTTaGGGCAACCGCCGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCHTGPR*GNRRCA
Trigger: GGCACAGCGGCGGTTGCCTCAACGGGGGCCTGTGTG...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTAGTGACACTGCCCACTaGCAGGGTCGCAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTSDTAH*QGRSQP
Trigger: GGGCTGACTGCGACCCTGTCAGTGGGCAGTGTCACT...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACAGTGACACTGCCCACTaGCAGGGTCGCAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: WSPKARVPSGWDWRGGLHSDTAH*QGRSQP
Trigger: GGGCTGACTGCGACCCTGTCAGTGGGCAGTGTCACT...GTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp GCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACGGGACTGCCTCTTCGTCCACATCATACTaGCAGCGGGGTCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ARVPSGWDWRGGLHGTASSSTSY*QRGPWK
Trigger: CTTCCAGGGACCCCGCTGTCAGTATGATGTGGACGA...AGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCATGGCCAGGCAGGTCCTaGTGTCAGTGTGGAGCCGGA +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPWPGRS*CQCGAG
Trigger: TCCGGCTCCACACTGACAGCAGGACCTGCCTGGCCA...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCCTCGCTCACAGAGCTGGACACAGTGGTaGTGGCAGCCGCCATTGCCC +
Preference number: 4 (lower is better)
Translates to: QVCSQPTPNRFWGQPRSQSWTQW*WQPPLP
Trigger: GGGCAATGGCGGCTGCCAGCACCACTGTGTCCAGCT...CTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCCGGCACTGGCAGCGATaGCGAGTGATTGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GVAQAPISAGAGVLAAHARHWQR*RVIVSW
Trigger: CCAGCTCACAATCACTCGGCATCGCTGCCAGTGCCG...GGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCTCAGCACTGGTGTGGCTaGAGCCATGGGAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RPHLSSVQLRAAGRAGLPQHWCG*SHGSSR
Trigger: GCGGCTGCTCCCATGGCTGCAGCCACACCAGTGCTG...AGGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp TTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGAGCCGCGGGGACATGTaGACAGGGGCCCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: FLQEQVCSQPTPNRFWGQSRGDM*TGAQHW
Trigger: CCAGTGCTGGGCCCCTGTGCACATGTCCCCGCGGCT...CTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACGGGACTGCCTCTGCAGCACGGGCTGTCTaGACAGTCGTCGACATCGAT +
Preference number: 4 (lower is better)
Translates to: ARVPSGWDWRGGLHGTASAARAV*TVVDID
Trigger: ATCGATGTCGACGACTGTGCAGACAGCCCGTGCTGC...AGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTCGCCAGGGTTGTTGGTaGACACCTGCTGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTRQGCW*TPAGST
Trigger: CGTGCTGCCAGCAGGTGTGCACCAACAACCCTGGCG...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp AGGCGGCTCCGTAGCGCCCAGGGGGACAGGCCAGCTCGCAGTGCCGCCCCGTCCAGCTGCAGGAGAAGCTaGAGTTCTTCCCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: RRLRSAQGDRPARSAAPSSCRRS*SSSQRC
Trigger: ACACCTTTGGGAAGAACTGCAGCTTCTCCTGCAGCT...GGACGGGGCGGCACTGCGAGCTGGCCTGTCCCCCTGGGCGCTACGGAGCCGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCCTCGCTCACAGGACTGCGTGTGGGGCTaGACACACTGGCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: QVCSQPTPNRFWGQPRSQDCVWG*THWHSS
Trigger: GGAGGAGTGCCAGTGTGTGCAGCCCCACACGCAGTC...CTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CGTGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGGCTCCGTAGCGCCCCCCGGAAGCCAGCCTTaGAGGAGCAGCTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: RAVVVAGALQMAGGSVAPPGSQP*RSSCHP
Trigger: GGGATGGCAGCTGCTCCTGCAAGGCTGGCTTCCGGG...GGGCGCTACGGAGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp AGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCCCAGCTCACACTCTaGCTGACAGCGCTCGCCCCG +
Preference number: 4 (lower is better)
Translates to: SSCRCWRGTGPHFCRSRCAQLTL*LTALAP
Trigger: CGGGGCGAGCGCTGTCAGGCAGAGTGTGAGCTGGGC...ACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCGCCCACTGGGCAGGTaGATGCCTGCCAGCACCCCG +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPRPLGR*MPASTP
Trigger: CGGGGTGCTGGCAGGCATGCACCTGCCCAGTGGGCG...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGCAGCGTGCTGGCATaGTGGGCAGATCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: APAPTLAPTPVLSPTQSRGSVLA*WADLLA
Trigger: TGCCAGGAGATCTGCCCAGCATGCCAGCACGCTGCC...GCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp TCACAGAAGTGGCCGTGGAAGCCGGCAGGGCAGAGGCATCGGCCACTGATGGGGTCGCAGCGGGCAGCGTaGTGGCATGCTGGGCAGATC +
Preference number: 4 (lower is better)
Translates to: SQKWPWKPAGQRHRPLMGSQRAA*WHAGQI
Trigger: GATCTGCCCAGCATGCCAGCACGCTGCCCGCTGCGA...CCCCATCAGTGGCCGATGCCTCTGCCCTGCCGGCTTCCACGGCCACTTCTGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCAAGTTGCAGGGGTGGCTaGAGTCAGGTCCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPSCRGG*SQVPSA
Trigger: GGCACTGGGGACCTGACTGCAGCCACCCCTGCAACT...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CTCCTCCTCCTGCTGGTGAAATTGTCTGCCCTGGGGCCTCAGCTACCTTGGCTGCCCTGGGGACACTGCTaGTCGCACCGCGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: LLLLLVKLSALGPQLPWLPWGHC*SHRGPT
Trigger: CGTGGGCCCGCGGTGCGAGCAGCAGTGTCCCCAGGG...CAGCCAAGGTAGCTGAGGCCCCAGGGCAGACAATTTCACCAGCAGGAGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCGGCCGGGCAGGCATaGTCGCAGAAGGTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPPAGQA*SQKVPL
Trigger: GAGGGGCACCTTCTGCGAGCATGCCTGCCCGGCCGG...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp AGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTAGGCAACCGCCGCTGTaGCGGCAGCCAGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: SSCRCWRGTGPHFCRSRCRQPPL*RQPALT
Trigger: CGTCAGAGCTGGCTGCCGGCACAGCGGCGGTTGCCT...ACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCGGGCCGAAGCGGCCCTaGGGACAGGTGAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: PQGHTSLQERQVAGLSTAGPKRP*GQVRLQ
Trigger: CTGCAACCTCACCTGTCCGCAGGGCCGCTTCGGCCC...GGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACGGGACTGCCTCTTGGCAGGCTCACACGTaGTGTTGTTGTGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ARVPSGWDWRGGLHGTASWQAHT*CCCGRS
Trigger: GCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCA...AGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCTGGAGGCGGGCAGTGTaGCCGCTGAGCCCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: PQGHTSLQERQVAGLSTAWRRAV*PLSPGL
Trigger: TAGCCCAGGGCTCAGCGGGCACACTGCCCGCCTCCA...GGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CCGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCCACCGCGCGCCCCGCTaGCCTCGCCTCTTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: PQSQCRVQLGPNWPLLQSHRAPR*PRLFKE
Trigger: TTCCTTGAAGAGGCGAGGGCAGCGGGGCGCGCGGTG...GGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCACACACGTGGGGCATaGCGGGCTGCAGCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PQGHTSLQERQVAGLSTAHTRGA*RAAAGA
Trigger: TGCTCCCGCTGCAGCCCGGCATGCCCCACGTGTGTG...GGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGCACACACGTGGGGCATaGCGGGCTGCAGCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PPFLQEQVCSQPTPNRFWHTRGA*RAAAGA
Trigger: TGCTCCCGCTGCAGCCCGGCATGCCCCACGTGTGTG...CCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp AGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGTGTGGCTTAAGGCCTaGACGCACGGCTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: SSCRCWRGTGPHFCRSRCVWLKA*THGWRR
Trigger: CCGCCGCCAGCCGTGCGTGCAGGCCTTAAGCCACAC...ACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCTTCCTCGTCGGGCTGCTaGATCCACCCTCGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RPHLSSVQLRAAGRAGLPSSSGC*IHPRQH
Trigger: GTGCTGCCGAGGGTGGATGCAGCAGCCCGACGAGGA...AGGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CGTGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGGCTCCGTAGCGCCCTCCTCGTCGGGCTGCTaGATCCACCCTCGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RAVVVAGALQMAGGSVAPSSSGC*IHPRQH
Trigger: GTGCTGCCGAGGGTGGATGCAGCAGCCCGACGAGGA...GGGCGCTACGGAGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp TGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCCTCGCTCACAGCGGACGTTCACGCACCGGTGCTaGCAGCCACCGTTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: CSQPTPNRFWGQPRSQRTFTHRC*QPPLWV
Trigger: AACCCACAACGGTGGCTGCCAGCACCGGTGCGTGAA...CGTCCGCTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGGCTCCCGTCCTCCTGGAGCTaGAACCCGGGCCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: QAHTCCCCGRSTPDGRRLPSSWS*NPGRHW
Trigger: CCAGTGCCGGCCCGGGTTCCAGCTCCAGGAGGACGG...GAGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTGTGTTGAGGCAGCCATaGGCACACTGGGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTVLRQP*AHWASP
Trigger: AGGGCTGGCCCAGTGTGCCCATGGCTGCCTCAACAC...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCTACAGGGGCCCAGCACTaGTGTGGCTGCAGCCATGGG +
Preference number: 4 (lower is better)
Translates to: RPHLSSVQLRAAGRAGLPTGAQH*CGCSHG
Trigger: CCCATGGCTGCAGCCACACCAGTGCTGGGCCCCTGT...AGGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCTCGCAGCCGCCACGGCTaGAGGCGCACTCATCCACAT +
Preference number: 4 (lower is better)
Translates to: RPHLSSVQLRAAGRAGLPRSRHG*RRTHPH
Trigger: ATGTGGATGAGTGCGCCTCCAGCCGTGGCGGCTGCG...AGGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCATGGAGCACGGCAATGTaGGGCAGGGGCCGCACGAAA +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPWSTAM*GRGRTK
Trigger: TTTCGTGCGGCCCCTGCCCCACATTGCCGTGCTCCA...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTGGGGCTGCACACACTaGCACTCCTCCGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: HRPPFLQEQVCSQPTPNRWGCTH*HSSEQP
Trigger: GGGCTGCTCGGAGGAGTGCCAGTGTGTGCAGCCCCA...CCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGCCACAGTCCTCTCCCTaGAAGCCAGCAGGACACCGC +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGPQSSP*KPAGHR
Trigger: GCGGTGTCCTGCTGGCTTCCAGGGAGAGGACTGTGG...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGGCTGGGCAGATCTCCTaGCAGCCCAGCCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: QSQCRVQLGPNWPLLQSRAGQIS*QPSPQR
Trigger: CCGCTGGGGGCTGGGCTGCCAGGAGATCTGCCCAGC...CCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCAAGCGTGCTGGCATGCTaGGCAGATCTCCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPSVLAC*ADLLAA
Trigger: GGCTGCCAGGAGATCTGCCCAGCATGCCAGCACGCT...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCACACAGTGACACTGCCCACCATACCAGCCTGCTaGGCACACGTCCTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ARFPARGPHVAIHTVTLPTIPAC*AHVLAA
Trigger: CGCTGCCAGGACGTGTGCCCAGCAGGCTGGTATGGT...GGGCAGTGTCACTGTGTGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGCAGGCCCCAGTGACGTaGTGGCAGGCAGCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VAGSHVLLLWQEHSRWQAQAPVT*WQAAPG
Trigger: GCCTGGCGCTGCCTGCCACCACGTCACTGGGGCCTG...CGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTCAGCTGTTCACAGCCTaGCCCATACCGCCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSQLFTA*PIPPGR
Trigger: CCGCCCGGGCGGTATGGGCCAGGCTGTGAACAGCTG...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp AGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTCAGCTGTTCACAGCCTaGCCCATACCGCCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: SSCRCWRGTGPHFCRSRCQLFTA*PIPPGR
Trigger: CCGCCCGGGCGGTATGGGCCAGGCTGTGAACAGCTG...ACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACCCACACCCACACACGTaGGTGCAGTTGGGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: WSPKARVPSGWDWRGGLHPHPHT*VQLGPK
Trigger: CTTCGGCCCCAACTGCACCCACGTGTGTGGGTGTGG...GTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCACGCCAAACCGGTTCTaGGGGCAGCCTCGCTCACAG +
Preference number: 4 (lower is better)
Translates to: APTPVLSPTQSRGESGTSTPNRF*GQPRSQ
Trigger: CTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGT...GGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCCTGCCGTTGCTGGCGTaGCACAGGCCCCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSLPLLA*HRPPFL
Trigger: CAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAG...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACTGCCGTTGCTGGCGTaGCACAGGCCCCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPLPLLA*HRPPFL
Trigger: CAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAG...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCAAGTGCAGGGTGCAGCTaGGCCCAAACTGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPSAGCS*AQTGPF
Trigger: GAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACT...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACACCTTCCCGGCACGTaGGCCCCATGTAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPHLPGT*APCSHP
Trigger: TGGATGGCTACATGGGGCCCACGTGCCGGGAAGGTG...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCTGTGCCCGCTGAGCCCTaGGCTAAGGACGGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: RPHLSSVQLRAAGRAGLPVPAEP*AKDGFS
Trigger: CGAGAACCCGTCCTTAGCCCAGGGCTCAGCGGGCAC...AGGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTGCTCAGCACACACGTaGGGCATGCCGGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HRPPFLQEQVCSQPTPNRCSAHT*GMPGCS
Trigger: GCTGCAGCCCGGCATGCCCCACGTGTGTGCTGAGCA...CCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCATCGTTGCTGGCAGCTaGGGCCGTGGTAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: APTPVLSPTQSRGESGTSIVAGS*GRGSQQ
Trigger: CTGCTGGCTACCACGGCCCCAGCTGCCAGCAACGAT...GGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CTCCTCCTCCTGCTGGTGAAATTGTCTGCCCTGGGGCCTCAGCTACCTTGGCTGGGGCCCCGGGTGCACTaGGAGGTCCCTGGGTGCACC +
Preference number: 4 (lower is better)
Translates to: LLLLLVKLSALGPQLPWLGPRVH*EVPGCT
Trigger: GGTGCACCCAGGGACCTCCCAGTGCACCCGGGGCCC...CAGCCAAGGTAGCTGAGGCCCCAGGGCAGACAATTTCACCAGCAGGAGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CAA 72 bp CAGCGGCAGGTGCCCGTGGCAGGCTCACACGTGCTGTaGTTGTGGCAGGAGCACTCCAGATGGCAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: QRQVPVAGSHVL*LWQEHSRWQAA
Trigger: AGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTGCCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp GGCAGGTGCCCGTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAAGCTCACACTCTGCCTaGCAGCGCTCGCCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: GRCPWQAHTCCCCGRSTPSSHSA*QRSPRK
Trigger: CTTCCGGGGCGAGCGCTGTCAGGCAGAGTGTGAGCT...TGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCAACAGACACAGGCCGCTaGTGGCATCACAGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPTDTGR*WHHSSR
Trigger: ACGGGAGCTGTGATGCCATCAGCGGCCTGTGTCTGT...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTAGGTGCAGGCCCCGCTaGCGTGGTCACAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCRCRPR*RGHRLL
Trigger: GAGCAGCCTGTGACCACGTCAGCGGGGCCTGCACCT...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCACGCAGGCAGGGGCTCTaGCACTTGTCCCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSRRQGL*HLSPVQ
Trigger: CTGGACTGGGGACAAGTGTCAGAGCCCCTGCCTGCG...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGGGAGCTCTGGGCCCGTaGAGTGTCCTTCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGGALGP*SVLLSG
Trigger: ACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCC...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp TTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGGCACGCACAGTGGCCTaGGACAGGGTCACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: FLQEQVCSQPTPNRFWGQARTVA*DRVTGP
Trigger: GGGACCTGTGACCCTGTCTCAGGCCACTGTGCGTGC...CTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCTCCTCCTCCTGCTGGTaGAATTGTCTGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSSSSCW*NCLPWG
Trigger: GCCCCAGGGCAGACAATTTCACCAGCAGGAGGAGGA...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTCCGCCGTTGGATAGCTaGGATTTCCTCCGGATGGGC +
Preference number: 4 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTPPLDS*DFLRMG
Trigger: GCCCATCCGGAGGAAATCTCAGCTATCCAACGGCGG...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CTCCATGTTGACACCAGCACAACCCCTGGCAGCCAGCCCCGTGGAAGCCAGGGGTGGCCAGGCAGGTCCTaGTGTCAGTGTGGAGCCGGA +
Preference number: 4 (lower is better)
Translates to: LHVDTSTTPGSQPRGSQGWPGRS*CQCGAG
Trigger: TCCGGCTCCACACTGACAGCAGGACCTGCCTGGCCA...CCCCTGGCTTCCACGGGGCTGGCTGCCAGGGGTTGTGCTGGTGTCAACATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCAGCTGGACACAGTGGTaGTGGCAGCCGCCATTGCCC +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGSWTQW*WQPPLP
Trigger: GGGCAATGGCGGCTGCCAGCACCACTGTGTCCAGCT...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCACACTGGGCCAGCCCTaGGGCACATTCGTCCACATC +
Preference number: 4 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSTLGQP*GTFVHI
Trigger: GATGTGGACGAATGTGCCGCAGGGCTGGCCCAGTGT...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CTCCATGTTGACACCAGCACAACCCCTGGCAGCCAGCCCCGTGGAAGCCAGGGGCGCCAGGGTTGTTGGTaGACACCTGCTGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: LHVDTSTTPGSQPRGSQGRQGCW*TPAGST
Trigger: CGTGCTGCCAGCAGGTGTGCACCAACAACCCTGGCG...CCCCTGGCTTCCACGGGGCTGGCTGCCAGGGGTTGTGCTGGTGTCAACATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGAGGTTGGTGCAGTGGTaGTCGCAGCCGCCACGGCTG +
Preference number: 4 (lower is better)
Translates to: PPFLQEQVCSQPTPNRFWRLVQW*SQPPRL
Trigger: CAGCCGTGGCGGCTGCGAGCACCACTGCACCAACCT...CCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACGGGACTGCCTCTAGGTCCCTCCGTTCCTaGAGTCATCACAGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: ARVPSGWDWRGGLHGTASRSLRS*SHHRSS
Trigger: GCTTGACCTGTGATGACTGCAGGAACGGAGGGACCT...AGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCGGCAGCGTGCTGGCATaGTGGGCAGATCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGGSVLA*WADLLA
Trigger: TGCCAGGAGATCTGCCCAGCATGCCAGCACGCTGCC...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CTCCATGTTGACACCAGCACAACCCCTGGCAGCCAGCCCCGTGGAAGCCAGGGGGGCAGCGTGCTGGCATaGTGGGCAGATCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LHVDTSTTPGSQPRGSQGGSVLA*WADLLA
Trigger: TGCCAGGAGATCTGCCCAGCATGCCAGCACGCTGCC...CCCCTGGCTTCCACGGGGCTGGCTGCCAGGGGTTGTGCTGGTGTCAACATGGAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCTCGCAGCGGGCAGCGTaGTGGCATGCTGGGCAGATC +
Preference number: 4 (lower is better)
Translates to: PQGHTSLQERQVAGLSTASQRAA*WHAGQI
Trigger: GATCTGCCCAGCATGCCAGCACGCTGCCCGCTGCGA...GGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTACCCGGGGGCACAGCTaGAGTGTCCGGTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCTRGHS*SVRWLG
Trigger: ACCCAGCCACCGGACACTGCAGCTGTGCCCCCGGGT...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTTCCCGTGGCCAGCGCTaGAGTTGCAGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCSRGQR*SCRGGC
Trigger: GCAGCCACCCCTGCAACTGCAGCGCTGGCCACGGGA...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGTCCCGTGGCCAGCGCTaGAGTTGCAGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VAGSHVLLLWQEHSRWQASRGQR*SCRGGC
Trigger: GCAGCCACCCCTGCAACTGCAGCGCTGGCCACGGGA...CGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CTCCTCCTCCTGCTGGTGAAATTGTCTGCCCTGGGGCCTCAGCTACCTTGGCTGCATGCTCGCAGAAGGTaGCCCTCCAGCCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LLLLLVKLSALGPQLPWLHARRR*PSSRPG
Trigger: GCCCGGCCGGCTGGAGGGGCACCTTCTGCGAGCATG...CAGCCAAGGTAGCTGAGGCCCCAGGGCAGACAATTTCACCAGCAGGAGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTCATGCTCGCAGAAGGTaGCCCTCCAGCCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: VTVQGAAGPKLAPSAIQVHARRR*PSSRPG
Trigger: GCCCGGCCGGCTGGAGGGGCACCTTCTGCGAGCATG...AACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp TTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGAGGCAGCTCCGGCGGTaGAGTTGCAGGCACTGCGAC +
Preference number: 4 (lower is better)
Translates to: FLQEQVCSQPTPNRFWGQRQLRR*SCRHCD
Trigger: GTCGCAGTGCCTGCAACTGCACCGCCGGAGCTGCCT...CTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CTCCTCCTCCTGCTGGTGAAATTGTCTGCCCTGGGGCCTCAGCTACCTTGGCTGTCGCAGGCCGCCCCCTaGCCACACCCACACACGTGG +
Preference number: 4 (lower is better)
Translates to: LLLLLVKLSALGPQLPWLSQAAP*PHPHTW
Trigger: CCACGTGTGTGGGTGTGGGCAGGGGGCGGCCTGCGA...CAGCCAAGGTAGCTGAGGCCCCAGGGCAGACAATTTCACCAGCAGGAGGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGGCTCAGGAGCAGCTGCCGTTaGTGGCGTGGCACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: QAHTCCCCGRSTPDGRRLRSSCR*WRGTGP
Trigger: GGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCT...GAGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGAGTCACAGTGCAGGGTaGAGCTGGGCCCAAACTGGC +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGSHSAG*SWAQTG
Trigger: GCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACT...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GCCTCAGCCCATGAGTGCCAGGTGCTCGGGAGGGCTGGTCTGTCCTCACCCAGGAGTCACAGTGCAGGGTaGAGCTGGGCCCAAACTGGC +
Preference number: 4 (lower is better)
Translates to: ASAHECQVLGRAGLSSPRSHSAG*SWAQTG
Trigger: GCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACT...CCTGGGTGAGGACAGACCAGCCCTCCCGAGCACCTGGCACTCATGGGCTGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACCAAGAGCGACAGGTTaGTGGGCTGTCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPPRATG*WAVHSP
Trigger: AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGG...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp AGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTACAGGCCCACGCACCACGCCTaGCACCCACAGCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SAGCSWAQTGPFCNPGYRPTHHA*HPQPAF
Trigger: GAAGGCCGGCTGTGGGTGGCAGGCGTGGTGCGTGGG...CCTGTAACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGCCCTCCTCGTCGGGCTaGTGCATCCACCCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: QSQCRVQLGPNWPLLQSRPSSSG*CIHPRQ
Trigger: CTGCCGAGGGTGGATGCAGCAGCCCGACGAGGAGGG...CCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp TTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGAGTCCTCCCCAAAGCTaGCGGGTGGGCAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: FLQEQVCSQPTPNRFWGQSPPQS*RVGRPA
Trigger: AGCAGGCCTGCCCACCCGGCAGCTTTGGGGAGGACT...CTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GGGAGGTCCCTGGGTGCACCGTTATGCTGGCCGGGCCCCAGGGAGGAGCCCACAAGGCCACGAGGAGGTTaGCTGCTCCTTTACCTTCCT +
Preference number: 4 (lower is better)
Translates to: GRSLGAPLCWPGPREEPTRPRGG*LLLYLP
Trigger: AGGAAGGTAAAGGAGCAGGCAACCTCCTCGTGGCCT...TGTGGGCTCCTCCCTGGGGCCCGGCCAGCATAACGGTGCACCCAGGGACCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTGCATTCGTCCACATCTaGCCTCTGGTCACCGGCGCT +
Preference number: 4 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTAFVHI*PLVTGA
Trigger: AGCGCCGGTGACCAGAGGCCAGATGTGGACGAATGC...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294599.8
CDS-3UTR CCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGTTCACGCACCGGTGCTaGCAGCCACCGTTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGFTHRC*QPPLWV
Trigger: AACCCACAACGGTGGCTGCCAGCACCGGTGCGTGAA...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CTCCTCCTCCTGCTGGTGAAATTGTCTGCCCTGGGGCCTCAGCTACCTTGGCTGTGCCTGCCGTCCTCCTaGAGCTGGAACCCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LLLLLVKLSALGPQLPWLCLPSS*SWNPGR
Trigger: CCGGCCCGGGTTCCAGCTCCAGGAGGACGGCAGGCA...CAGCCAAGGTAGCTGAGGCCCCAGGGCAGACAATTTCACCAGCAGGAGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp TTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGAGGCCCCGGACCACCTaGCACCTGTGCATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FLQEQVCSQPTPNRFWGQRPRTT*HLCMQL
Trigger: CAGCTGCATGCACAGGTGCCAGGTGGTCCGGGGCCT...CTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CTCCATGTTGACACCAGCACAACCCCTGGCAGCCAGCCCCGTGGAAGCCAGGGGGTGTTGAGGCAGCCATaGGCACACTGGGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LHVDTSTTPGSQPRGSQGVLRQP*AHWASP
Trigger: AGGGCTGGCCCAGTGTGCCCATGGCTGCCTCAACAC...CCCCTGGCTTCCACGGGGCTGGCTGCCAGGGGTTGTGCTGGTGTCAACATGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CTCCATGTTGACACCAGCACAACCCCTGGCAGCCAGCCCCGTGGAAGCCAGGGGACCCGCCAGGGTTGTTaGTGCACACCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LHVDTSTTPGSQPRGSQGTRQGC*CTPAGS
Trigger: GCTGCCAGCAGGTGTGCACCAACAACCCTGGCGGGT...CCCCTGGCTTCCACGGGGCTGGCTGCCAGGGGTTGTGCTGGTGTCAACATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CAGGTGCCCGTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGAGCCAGGTTGGTGCAGTaGTGCTCGCAGCCGCCACGG +
Preference number: 4 (lower is better)
Translates to: QVPVAGSHVLLLWQEHSRARLVQ*CSQPPR
Trigger: CCGTGGCGGCTGCGAGCACCACTGCACCAACCTGGC...TCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp TCACAGAAGTGGCCGTGGAAGCCGGCAGGGCAGAGGCATCGGCCACTGATGGGGTGGAGCACGGCAATGTaGGGCAGGGGCCGCACGAAA +
Preference number: 4 (lower is better)
Translates to: SQKWPWKPAGQRHRPLMGWSTAM*GRGRTK
Trigger: TTTCGTGCGGCCCCTGCCCCACATTGCCGTGCTCCA...CCCCATCAGTGGCCGATGCCTCTGCCCTGCCGGCTTCCACGGCCACTTCTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTTGCGGCAGCTCGTCCTaGAGCACGGCAATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSCGSSS*STAMWG
Trigger: GCCCCACATTGCCGTGCTCCAGGACGAGCTGCCGCA...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACGGCACCGGCCCCGGTTaGCACAGTTGCATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: WSPKARVPSGWDWRGGLHGTGPG*HSCISC
Trigger: GCAAGAAATGCAACTGTGCCAACCGGGGCCGGTGCC...GTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGCCACAGTCCTCTCCCTaGAAGCCAGCAGGACACCGC +
Preference number: 4 (lower is better)
Translates to: HRPPFLQEQVCSQPTPNRPQSSP*KPAGHR
Trigger: GCGGTGTCCTGCTGGCTTCCAGGGAGAGGACTGTGG...CCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCACAGCGGGCAGCGTGCTaGCATGCTGGGCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSQRAAC*HAGQIS
Trigger: GGAGATCTGCCCAGCATGCCAGCACGCTGCCCGCTG...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CACAGTCACAGCGCTGGTGGCAGCCCTCTCCAAATGAACCTGGCTCACACCCCCGCTGGGCACACGTCCTaGCAGCGGCTGCCGACGAAG +
Preference number: 4 (lower is better)
Translates to: HSHSAGGSPLQMNLAHTPAGHTS*QRLPTK
Trigger: CTTCGTCGGCAGCCGCTGCCAGGACGTGTGCCCAGC...GGGGGTGTGAGCCAGGTTCATTTGGAGAGGGCTGCCACCAGCGCTGTGACTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCTACCATACCAGCCTGCTaGGCACACGTCCTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RPHLSSVQLRAAGRAGLPTIPAC*AHVLAA
Trigger: CGCTGCCAGGACGTGTGCCCAGCAGGCTGGTATGGT...AGGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCACCTTGTCTGGCAGCTaGGACCATACCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GVAQAPISAGAGVLAAHATLSGS*DHTSLL
Trigger: CAGCAGGCTGGTATGGTCCCAGCTGCCAGACAAGGT...GGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCGCATCACAGCTCCCGTaGCCAGCGCTGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGASQLP*PALQLQ
Trigger: CTGCAACTGCAGCGCTGGCCACGGGAGCTGTGATGC...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGGCCCAAAGTGGCCCTaGGGACACTGCTGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSGPKWP*GHCCSH
Trigger: GTGCGAGCAGCAGTGTCCCCAGGGCCACTTTGGGCC...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGGGGCAGCTGCAGCGCTaGGCACAGGCCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: FLQEQVCSQPTPNRFWGQGQLQR*AQASPN
Trigger: GTTTGGAGAGGCCTGTGCCCAGCGCTGCAGCTGCCC...CTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAGCCCCAGTGACGTGGTaGCAGGCAGCGCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPAPVTW*QAAPGG
Trigger: CCCGCCTGGCGCTGCCTGCCACCACGTCACTGGGGC...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCAGCGGCAGGCCCCCGTaGCCGCATCACAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: STRSSGPVKCPSQWSPKASGRPP*PHHRSP
Trigger: GGGGCTCCTGTGATGCGGCCACGGGGGCCTGCCGCT...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GGCAGGTGCCCGTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAAGCAGCTGCCGTTGCTaGCGTGGCACAGGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: GRCPWQAHTCCCCGRSTPSSCRC*RGTGPH
Trigger: ATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCT...TGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACAGCTGGGCCCAAACTaGCCCCTTCTGCAATCCAGG +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPQLGPN*PLLQSR
Trigger: CCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTG...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTGTGCCCGCTGAGCCCTaGGCTAAGGACGGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSVPAEP*AKDGFS
Trigger: CGAGAACCCGTCCTTAGCCCAGGGCTCAGCGGGCAC...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCCTACTAGTGCCTCGCTaGTCCACCGCTCCGGGATGT +
Preference number: 4 (lower is better)
Translates to: APAPTLAPTPVLSPTQSRLLVPR*STAPGC
Trigger: ACATCCCGGAGCGGTGGACCAGCGAGGCACTAGTAG...GCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACAGAGCGACAGGTTGCTaGGCTGTCCACAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: WSPKARVPSGWDWRGGLHRATGC*AVHSPP
Trigger: TGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCT...GTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCCAGAGCGTGCCCCTaGGTTCTGCAGAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPPRACP*VLQSQA
Trigger: GGCCTGGCTCTGCAGAACCCAGGGGCACGCTCTGGG...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GGGAGGTCCCTGGGTGCACCGTTATGCTGGCCGGGCCCCAGGGAGGAGCCCACAAGGGTTTCTGGGGATTaGGCAGGAGATGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: GRSLGAPLCWPGPREEPTRVSGD*AGDDRQ
Trigger: CTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCT...TGTGGGCTCCTCCCTGGGGCCCGGCCAGCATAACGGTGCACCCAGGGACCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CTCCATGTTGACACCAGCACAACCCCTGGCAGCCAGCCCCGTGGAAGCCAGGGGCACACCGGCACCGTGTaGCTTAAGGCCTGCACGCAC +
Preference number: 4 (lower is better)
Translates to: LHVDTSTTPGSQPRGSQGHTGTV*LKACTH
Trigger: GTGCGTGCAGGCCTTAAGCCACACGGTGCCGGTGTG...CCCCTGGCTTCCACGGGGCTGGCTGCCAGGGGTTGTGCTGGTGTCAACATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCACGGTCCGGGCCTCCGTaGTATACACCTGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: AVAGVAQAPISAGAGVLARSGPP*YTPACS
Trigger: GCTACAGGCAGGTGTATACCACGGAGGCCCGGACCG...TGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCAGCCAGGGGCACAGTaGCACTGCCCGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPQPGAQ*HCPWTG
Trigger: CCCTGTCCACGGGCAGTGCCACTGTGCCCCTGGCTG...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CACAGTCACAGCGCTGGTGGCAGCCCTCTCCAAATGAACCTGGCTCACACCCCCCAGCCAGGGGCACAGTaGCACTGCCCGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: HSHSAGGSPLQMNLAHTPQPGAQ*HCPWTG
Trigger: CCCTGTCCACGGGCAGTGCCACTGTGCCCCTGGCTG...GGGGGTGTGAGCCAGGTTCATTTGGAGAGGGCTGCCACCAGCGCTGTGACTGTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CAGGAGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGATCGTTGCTGGCAGCTaGGGCCGTGGTAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QEQLPLLAWHRPPFLQEQIVAGS*GRGSQQ
Trigger: CTGCTGGCTACCACGGCCCCAGCTGCCAGCAACGAT...CTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp ATCCACACAGTGACACTGCCCACTGACAGGGTCGCAGTCAGCCCCACCCCCGCACACCAGCACAACCCCTaGCAGCCAGCCCCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: IHTVTLPTDRVAVSPTPAHQHNP*QPAPWK
Trigger: CTTCCACGGGGCTGGCTGCCAGGGGTTGTGCTGGTG...TGCGGGGGTGGGGCTGACTGCGACCCTGTCAGTGGGCAGTGTCACTGTGTGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp TGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCCTCGCTCACAGCGGACGAATCCAGGTTACAGGTaGCTCCTGAGCGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CSQPTPNRFWGQPRSQRTNPGYR*LLSALV
Trigger: CACCAGGGCGCTCAGGAGCCACCTGTAACCTGGATT...CGTCCGCTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCACACAGTGACACTGCCCGCCCGAATGTGCCCTTaGCACAGGGGCTCTGACACT +
Preference number: 4 (lower is better)
Translates to: ARFPARGPHVAIHTVTLPARMCP*HRGSDT
Trigger: AGTGTCAGAGCCCCTGTGCCAAGGGCACATTCGGGC...GGGCAGTGTCACTGTGTGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGAAGTCTCATTGCAGATaGGCCCAGTCCAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGKSHCR*AQSSPR
Trigger: CCGAGGGCTGGACTGGGCTCATCTGCAATGAGACTT...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCCCCACGGCGGGCAGGTaGGGTGGCAGAAGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCPTAGR*GGRSGR
Trigger: ACGGCCGCTTCTGCCACCTCACCTGCCCGCCGTGGG...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCCACACAGGCCCCCGTTaGGGCAACCGCCGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: STRSSGPVKCPSQWSPKAHTGPR*GNRRCA
Trigger: GGCACAGCGGCGGTTGCCTCAACGGGGGCCTGTGTG...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp CAGGAGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGCACAGGAGCCCCCGTTaGGACACCCACACAGCTGTT +
Preference number: 4 (lower is better)
Translates to: QEQLPLLAWHRPPFLQEQHRSPR*DTHTAV
Trigger: AACAGCTGTGTGGGTGTCTCAACGGGGGCTCCTGTG...CTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCGGCACCGCGGAGACCTaGTCGCCGGGTCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCGTAET*SPGPPC
Trigger: GCAGGGTGGACCCGGCGATCAGGTCTCCGCGGTGCC...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCACAGGGGGCTCCATGTTaGCACCAGCACAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSQGAPC*HQHNPW
Trigger: CCAGGGGTTGTGCTGGTGTCAACATGGAGCCCCCTG...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp AGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTAGAGGCATCGGCCACTaGTGGGGTCGCAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SHSAGCSWAQTGPFCNPGRGIGH*WGRRGL
Trigger: GAGCCCCCTGCGACCCCATCAGTGGCCGATGCCTCT...ACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp CACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGGCAGCCCTCTCCAAATaGACCTGGCTCACACCCCCT +
Preference number: 4 (lower is better)
Translates to: HRPPFLQEQVCSQPTPNRAALSK*TWLTPP
Trigger: AGGGGGTGTGAGCCAGGTTCATTTGGAGAGGGCTGC...CCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTGTCAGCCTCAGCCCATaGGTGCCAGGTGCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPVSLSP*VPGARE
Trigger: CTCCCGAGCACCTGGCACTCATGGGCTGAGGCTGAC...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp CTCCATGTTGACACCAGCACAACCCCTGGCAGCCAGCCCCGTGGAAGCCAGGGGTTGGCACAGGGGCTCTaGCACTTGTCCCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LHVDTSTTPGSQPRGSQGLAQGL*HLSPVQ
Trigger: CTGGACTGGGGACAAGTGTCAGAGCCCCTGTGCCAA...CCCCTGGCTTCCACGGGGCTGGCTGCCAGGGGTTGTGCTGGTGTCAACATGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp CAGGTGCCCGTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGACAGCGCCCCTCACAGTaGGGCCCGAATGTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: QVPVAGSHVLLLWQEHSRQRPSQ*GPNVPL
Trigger: CAAGGGCACATTCGGGCCTCACTGTGAGGGGCGCTG...TCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTGTGTTCACGCACCGGTaGTGGCAGCCACCGTTGTGG +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSVFTHR*WQPPLW
Trigger: CCACAACGGTGGCTGCCAGCACCGGTGCGTGAACAC...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTTGGCCAGGCAGGTCCTaGTGTCAGTGTGGAGCCGGA +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSWPGRS*CQCGAG
Trigger: TCCGGCTCCACACTGACAGCAGGACCTGCCTGGCCA...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTAGCTGGACACAGTGGTaGTGGCAGCCGCCATTGCCC +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSSWTQW*WQPPLP
Trigger: GGGCAATGGCGGCTGCCAGCACCACTGTGTCCAGCT...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACTTCTACGGACACAATaGCTGCCGTCCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPLLRTQ*LPSSWS
Trigger: GCTCCAGGAGGACGGCAGGCATTGTGTCCGTAGAAG...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACCTGTGCATGCAGCTaGCGTTCCTGTTGGCACACG +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGTCACS*RSCWHT
Trigger: CGTGTGCCAACAGGAACGGCAGCTGCATGCACAGGT...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTTTCGCCCCGCAACTCTaGCTCTTCCTCATCGGCCCC +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSFAPQL*LFLIGP
Trigger: GGGGCCGATGAGGAAGAGGCAGAGTTGCGGGGCGAA...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACTCTTGTCACAGGACTaGGTGTGGGGCTGCACACAC +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPLLSQD*VWGCTH
Trigger: GTGTGTGCAGCCCCACACGCAGTCCTGTGACAAGAG...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCCTCTTGTCACAGGACTaGGTGTGGGGCTGCACACAC +
Preference number: 4 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSLLSQD*VWGCTH
Trigger: GTGTGTGCAGCCCCACACGCAGTCCTGTGACAAGAG...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CTCCTCCTCCTGCTGGTGAAATTGTCTGCCCTGGGGCCTCAGCTACCTTGGCTGGGGCAGGTGCATGCCTaGCAGCACCCCGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LLLLLVKLSALGPQLPWLGQVHA*QHPGPK
Trigger: CTTTGGGCCGGGGTGCTGGCAGGCATGCACCTGCCC...CAGCCAAGGTAGCTGAGGCCCCAGGGCAGACAATTTCACCAGCAGGAGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCGGCGGACACCGGCACTaGCCCGTGACCCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCGGHRH*PVTPWQ
Trigger: CTGCCACGGGGTCACGGGGCAGTGCCGGTGTCCGCC...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTTCGCAGCGGGCAGCGTaGTGGCATGCTGGGCAGATC +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCSQRAA*WHAGQI
Trigger: GATCTGCCCAGCATGCCAGCACGCTGCCCGCTGCGA...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTAGGCAGCTCCGGCGGTaGAGTTGCAGGCACTGCGAC +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPRQLRR*SCRHCD
Trigger: GTCGCAGTGCCTGCAACTGCACCGCCGGAGCTGCCT...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGACCCACACACGTGGGTaGAGTTGGGGCCGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: VAGSHVLLLWQEHSRWQATHTRG*SWGRSG
Trigger: GCCGCTTCGGCCCCAACTGCACCCACGTGTGTGGGT...CGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACTGGCAGAGGCAGGAATaGCGACAGTTGTCGCCGTAC +
Preference number: 4 (lower is better)
Translates to: WSPKARVPSGWDWRGGLHWQRQE*RQLSPY
Trigger: GTACGGCGACAACTGTCGGCATTCCTGCCTCTGCCA...GTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCACTGGGCCGGGTGGGCAGGCCTaGTCGCAGCCGGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LGLSGNECSPSVLLNSTGPGGQA*SQPEPV
Trigger: CACTGGCTCCGGCTGCGAGCAGGCCTGCCCACCCGG...CCCAGTGCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCGGACACTGGCACATCTaGGCACAGTCCTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: APTPVLSPTQSRGESGTSGHWHI*AQSSPK
Trigger: CTTTGGGGAGGACTGTGCGCAGATGTGCCAGTGTCC...GGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTTCCACATCTGGCCTCTaGTCACCGGCGCTCACGGGG +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPSTSGL*SPALTG
Trigger: CCCCGTGAGCGCCGGTGACCAGAGGCCAGATGTGGA...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294599.8
CDS-3UTR CCA 90 bp TTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGAACCCGGGCCGGCACTaGCAGCGATGCCGAGTGATT +
Preference number: 4 (lower is better)
Translates to: FLQEQVCSQPTPNRFWGQNPGRH*QRCRVI
Trigger: AATCACTCGGCATCGCTGCCAGTGCCGGCCCGGGTT...CTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCAGCTGCCGTTCCTGTTaGCACACGGGCTTCTACGGA +
Preference number: 4 (lower is better)
Translates to: APTPVLSPTQSRGESGTSSCRSC*HTGFYG
Trigger: TCCGTAGAAGCCCGTGTGCCAACAGGAACGGCAGCT...GGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTAGGCCCCGGACCACCTaGCACCTGTGCATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPRPRTT*HLCMQL
Trigger: CAGCTGCATGCACAGGTGCCAGGTGGTCCGGGGCCT...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCAGCCATGGGCACACTaGGCCAGCCCTGCGGCACAT +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCQPWAH*ASPAAH
Trigger: ATGTGCCGCAGGGCTGGCCCAGTGTGCCCATGGCTG...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGCAGCCATGGGCACACTaGGCCAGCCCTGCGGCACAT +
Preference number: 4 (lower is better)
Translates to: VAGSHVLLLWQEHSRWQAQPWAH*ASPAAH
Trigger: ATGTGCCGCAGGGCTGGCCCAGTGTGCCCATGGCTG...CGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCAAGCAGCCGCCGTTGTTaGCCTCACAGCTGTTCACGA +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPSSRRC*PHSCSR
Trigger: TCGTGAACAGCTGTGAGGCCAACAACGGCGGCTGCT...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAACCCGCCAGGGTTGTTaGTGCACACCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSTRQGC*CTPAGS
Trigger: GCTGCCAGCAGGTGTGCACCAACAACCCTGGCGGGT...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CACAGTCACAGCGCTGGTGGCAGCCCTCTCCAAATGAACCTGGCTCACACCCCCCGCAGCCGCCACGGCTaGAGGCGCACTCATCCACAT +
Preference number: 4 (lower is better)
Translates to: HSHSAGGSPLQMNLAHTPRSRHG*RRTHPH
Trigger: ATGTGGATGAGTGCGCCTCCAGCCGTGGCGGCTGCG...GGGGGTGTGAGCCAGGTTCATTTGGAGAGGGCTGCCACCAGCGCTGTGACTGTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp TGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCCTCGCTCACAGCGGACGTGCCATAGTAGCCCTTaGGGCAGCCATCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: CSQPTPNRFWGQPRSQRTCHSSP*GSHPHS
Trigger: ACTGTGAGGATGGCTGCCCCAAGGGCTACTATGGCA...CGTCCGCTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCGGCACCGGCCCCGGTTaGCACAGTTGCATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGGTGPG*HSCISC
Trigger: GCAAGAAATGCAACTGTGCCAACCGGGGCCGGTGCC...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACACCTTGTCTGGCAGCTaGGACCATACCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: WSPKARVPSGWDWRGGLHTLSGS*DHTSLL
Trigger: CAGCAGGCTGGTATGGTCCCAGCTGCCAGACAAGGT...GTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GGCAGGTGCCCGTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGCATCACAGCTCCCGTaGCCAGCGCTGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GRCPWQAHTCCCCGRSTPASQLP*PALQLQ
Trigger: CTGCAACTGCAGCGCTGGCCACGGGAGCTGTGATGC...TGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTGGCCCAAAGTGGCCCTaGGGACACTGCTGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCGPKWP*GHCCSH
Trigger: GTGCGAGCAGCAGTGTCCCCAGGGCCACTTTGGGCC...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTGGGCAGCTGCAGCGCTaGGCACAGGCCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPGQLQR*AQASPN
Trigger: GTTTGGAGAGGCCTGTGCCCAGCGCTGCAGCTGCCC...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAACGCCAAACCGGTTCTaGGGGCAGCCTCGCTCACAG +
Preference number: 4 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSTPNRF*GQPRSQ
Trigger: CTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGT...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTAGCGGCAGGTGCCCGTaGCAGGCTCACACGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPSGRCP*QAHTCC
Trigger: ACAGCACGTGTGAGCCTGCCACGGGCACCTGCCGCT...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp AGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTAGTGCAGGGTGCAGCTaGGCCCAAACTGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SSCRCWRGTGPHFCRSRCSAGCS*AQTGPF
Trigger: GAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACT...ACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCGTCCCGGTGGCAGGGTaGCAGGCCGGGTTCTCACCG +
Preference number: 4 (lower is better)
Translates to: STRSSGPVKCPSQWSPKAVPVAG*QAGFSP
Trigger: CGGTGAGAACCCGGCCTGCCACCCTGCCACCGGGAC...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CAGGTGCCCGTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGACCCCTCTCACAGAAGTaGCCGTGGAAGCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QVPVAGSHVLLLWQEHSRPLSQK*PWKPAG
Trigger: CCCTGCCGGCTTCCACGGCCACTTCTGTGAGAGGGG...TCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GGGAGGTCCCTGGGTGCACCGTTATGCTGGCCGGGCCCCAGGGAGGAGCCCACACTCAGAGCACCCTCCTaGCTTCTTTCTCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GRSLGAPLCWPGPREEPTLRAPS*LLSLLA
Trigger: AGCCAGAAGAGAAAGAAGCCAGGAGGGTGCTCTGAG...TGTGGGCTCCTCCCTGGGGCCCGGCCAGCATAACGGTGCACCCAGGGACCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp CTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCACTGGGAGCGGCAGGCCCCCGTaGCAGAGTCGCAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LGLSGNECSPSVLLNSTGSGRPP*QSRRSH
Trigger: GTGGGACCTGCGACTCTGTCACGGGGGCCTGCCGCT...CCCAGTGCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp TGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGGCTCCGTAGCGCCCAGACAGACACAGGCCGCTaGTGGCATCACAGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: CCCCGRSTPDGRRLRSAQTDTGR*WHHSSR
Trigger: ACGGGAGCTGTGATGCCATCAGCGGCCTGTGTCTGT...CTGGGCGCTACGGAGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp CGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCACAGGCTGCTCCATGCTaGCACTGGCACCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RSHSAGCSWAQTGPFCNPQAAPC*HWHRCS
Trigger: TGAGCAGCGGTGCCAGTGTCAGCATGGAGCAGCCTG...TGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp CAGTCTCTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCCGCAGCCGGAGCCAGTaGAGCCAGGGGGACAGCGGC +
Preference number: 4 (lower is better)
Translates to: QSLGLSGNECSPSVLLNSRSRSQ*SQGDSG
Trigger: GCCGCTGTCCCCCTGGCTTCACTGGCTCCGGCTGCG...GCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAGAGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTCACAGGAGCCCCCGTTaGGACACCCACACAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSHRSPR*DTHTAV
Trigger: AACAGCTGTGTGGGTGTCTCAACGGGGGCTCCTGTG...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp AGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTACGGTTCTCCGCTCATaGCCCACGCACCACGCCTGC +
Preference number: 4 (lower is better)
Translates to: SHSAGCSWAQTGPFCNPGTVLRS*PTHHAC
Trigger: GCAGGCGTGGTGCGTGGGTCATGAGCGGAGAACCGT...ACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp GCAGCCCCAGCGTTCTCCTCAATAGCACTGGGAACTGAGATGAGTCCCAACTTCACCCTCGGCAGCACCTaGGCACGGTCCGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: AAPAFSSIALGTEMSPNFTLGST*ARSGPP
Trigger: CGGAGGCCCGGACCGTGCTCAGGTGCTGCCGAGGGT...GAAGTTGGGACTCATCTCAGTTCCCAGTGCTATTGAGGAGAACGCTGGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp CTCCTCCTCCTGCTGGTGAAATTGTCTGCCCTGGGGCCTCAGCTACCTTGGCTGGTAGCCAGCAGCACATaGGCAGGTCCCGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLLLLVKLSALGPQLPWLVASST*AGPGGR
Trigger: CCTGCCACCGGGACCTGCTCATGTGCTGCTGGCTAC...CAGCCAAGGTAGCTGAGGCCCCAGGGCAGACAATTTCACCAGCAGGAGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp GTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTGTAGCCAGCAGCACATaGGCAGGTCCCGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VTVQGAAGPKLAPSAIQVVASST*AGPGGR
Trigger: CCTGCCACCGGGACCTGCTCATGTGCTGCTGGCTAC...AACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp CACAGTCACAGCGCTGGTGGCAGCCCTCTCCAAATGAACCTGGCTCACACCCCCAAAGGCAGAGACCGGTaGCAGGGTCACAGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: HSHSAGGSPLQMNLAHTPKGRDR*QGHRVP
Trigger: GGGCACCCTGTGACCCTGTCACCGGTCTCTGCCTTT...GGGGGTGTGAGCCAGGTTCATTTGGAGAGGGCTGCCACCAGCGCTGTGACTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTCGGCACTGGCAGCGATaGCGAGTGATTGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSRHWQR*RVIVSW
Trigger: CCAGCTCACAATCACTCGGCATCGCTGCCAGTGCCG...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp AGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTCCTGGCACCTGTGCATaGAGCTGCCGTTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SSCRCWRGTGPHFCRSRCPGTCA*SCRSCW
Trigger: CCAACAGGAACGGCAGCTGCATGCACAGGTGCCAGG...ACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp ATCCACACAGTGACACTGCCCACTGACAGGGTCGCAGTCAGCCCCACCCCCGCAACACTGGGCCAGCCCTaGGGCACATTCGTCCACATC +
Preference number: 4 (lower is better)
Translates to: IHTVTLPTDRVAVSPTPATLGQP*GTFVHI
Trigger: GATGTGGACGAATGTGCCGCAGGGCTGGCCCAGTGT...TGCGGGGGTGGGGCTGACTGCGACCCTGTCAGTGGGCAGTGTCACTGTGTGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAGCTCCTCCAGGGGGCTaGAGCCCCTACGGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPAPPGG*SPYGPR
Trigger: ACGAGGACCGTAGGGGCTGCAGCCCCCTGGAGGAGC...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCAGGTCCCTCCGTTCCTaGAGTCATCACAGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: APTPVLSPTQSRGESGTSRSLRS*SHHRSS
Trigger: GCTTGACCTGTGATGACTGCAGGAACGGAGGGACCT...GGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp TCACAGAAGTGGCCGTGGAAGCCGGCAGGGCAGAGGCATCGGCCACTGATGGGGCCTTGCAGGAGCAGCTaGCATCCCTCTTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: SQKWPWKPAGQRHRPLMGPCRSS*HPSCHR
Trigger: CCTGTGACAAGAGGGATGGCAGCTGCTCCTGCAAGG...CCCCATCAGTGGCCGATGCCTCTGCCCTGCCGGCTTCCACGGCCACTTCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCTTCCAGCGGCCATaGGAGGCTTCCCTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: PQGHTSLQERQVAGLSTALFQRP*EASLLK
Trigger: CTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAG...GGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTGGGGCACAGTGGCACTaGCCGTGGACAGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: VTVQGAAGPKLAPSAIQVGAQWH*PWTGSQ
Trigger: CTGTGACCCTGTCCACGGGCAGTGCCACTGTGCCCC...AACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GCCTCAGCCCATGAGTGCCAGGTGCTCGGGAGGGCTGGTCTGTCCTCACCCAGGATGTTGCGGTGTGAGTaGAGCCCTCTCCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: ASAHECQVLGRAGLSSPRMLRCE*SPLHWP
Trigger: TGGCCAATGGAGAGGGCTGCACTCACACCGCAACAT...CCTGGGTGAGGACAGACCAGCCCTCCCGAGCACCTGGCACTCATGGGCTGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GGCAGGTGCCCGTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAAGTGAGGCCCGAATGTaGCCTTGGCACAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GRCPWQAHTCCCCGRSTPSEARM*PWHRGS
Trigger: AGAGCCCCTGTGCCAAGGGCACATTCGGGCCTCACT...TGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCTGGCCCAGGTGACATaGGTAGCAGCCCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPLAQVT*VAAPPE
Trigger: CTCTGGAGGGGCTGCTACCCATGTCACCTGGGCCAG...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294599.8
CDS-3UTR CCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTGTCCTGCTGTCAGTGTaGAGCCGGAAGCCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCVLLSV*SRKPGL
Trigger: CAAGCCCGGCTTCCGGCTCCACACTGACAGCAGGAC...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGGCTCGTCCTGCTGTCAGTGTaGAGCCGGAAGCCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: QAHTCCCCGRSTPDGRRLVLLSV*SRKPGL
Trigger: CAAGCCCGGCTTCCGGCTCCACACTGACAGCAGGAC...GAGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp TCACAGAAGTGGCCGTGGAAGCCGGCAGGGCAGAGGCATCGGCCACTGATGGGGAGCTGCCGTTCCTGTTaGCACACGGGCTTCTACGGA +
Preference number: 4 (lower is better)
Translates to: SQKWPWKPAGQRHRPLMGSCRSC*HTGFYG
Trigger: TCCGTAGAAGCCCGTGTGCCAACAGGAACGGCAGCT...CCCCATCAGTGGCCGATGCCTCTGCCCTGCCGGCTTCCACGGCCACTTCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp AGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTGGCCCAGCACTGGTGTaGCTGCAGCCATGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SHSAGCSWAQTGPFCNPGGPALV*LQPWEQ
Trigger: CTGCTCCCATGGCTGCAGCCACACCAGTGCTGGGCC...ACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCGCCAGGTTGGTGCAGTaGTGCTCGCAGCCGCCACGG +
Preference number: 4 (lower is better)
Translates to: STRSSGPVKCPSQWSPKAARLVQ*CSQPPR
Trigger: CCGTGGCGGCTGCGAGCACCACTGCACCAACCTGGC...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCCGACGTCGTCATCCTaGAAGAGTTGCGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PQGHTSLQERQVAGLSTAPTSSS*KSCGSS
Trigger: CGAGCTGCCGCAACTCTTCCAGGATGACGACGTCGG...GGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGTGCCATAGTAGCCCTTaGGGCAGCCATCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGCHSSP*GSHPHS
Trigger: ACTGTGAGGATGGCTGCCCCAAGGGCTACTATGGCA...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CCCGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCGGCACCGGCCCCGGTTaGCACAGTTGCATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PAVTVQGAAGPKLAPSAIGTGPG*HSCISC
Trigger: GCAAGAAATGCAACTGTGCCAACCGGGGCCGGTGCC...GATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACAGTCCTCTCCCTaGAAGCCAGCAGGACACCGC +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPPQSSP*KPAGHR
Trigger: GCGGTGTCCTGCTGGCTTCCAGGGAGAGGACTGTGG...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGTATCACAGGCTCTCTaGCAGCTAAAGCCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: APAPTLAPTPVLSPTQSRVSQAL*QLKPVH
Trigger: GTGGACCGGCTTTAGCTGCCAGAGAGCCTGTGATAC...GCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTGCATCACAGCTCCCGTaGCCAGCGCTGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCASQLP*PALQLQ
Trigger: CTGCAACTGCAGCGCTGGCCACGGGAGCTGTGATGC...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTCAGGCCCCGCTGACGTaGTCACAGGCTGCTCCATGC +
Preference number: 4 (lower is better)
Translates to: VTVQGAAGPKLAPSAIQVQAPLT*SQAAPC
Trigger: GCATGGAGCAGCCTGTGACCACGTCAGCGGGGCCTG...AACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCAGCGGCAGGCCCCCGTaGCCGCATCACAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLISGRPP*PHHRSP
Trigger: GGGGCTCCTGTGATGCGGCCACGGGGGCCTGCCGCT...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CACAGTCACAGCGCTGGTGGCAGCCCTCTCCAAATGAACCTGGCTCACACCCCCACGCCAAACCGGTTCTaGGGGCAGCCTCGCTCACAG +
Preference number: 4 (lower is better)
Translates to: HSHSAGGSPLQMNLAHTPTPNRF*GQPRSQ
Trigger: CTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGT...GGGGGTGTGAGCCAGGTTCATTTGGAGAGGGCTGCCACCAGCGCTGTGACTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGCTGCCGTTGCTGGCGTaGCACAGGCCCCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: QSQCRVQLGPNWPLLQSRLPLLA*HRPPFL
Trigger: CAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAG...CCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGCACGTGCTGTTGTTGTaGCAGGAGCACTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGHVLLL*QEHSRW
Trigger: CCATCTGGAGTGCTCCTGCCACAACAACAGCACGTG...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTCACGTGCTGTTGTTGTaGCAGGAGCACTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTHVLLL*QEHSRW
Trigger: CCATCTGGAGTGCTCCTGCCACAACAACAGCACGTG...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp AGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTACAGGAGCGGCAGGTGCCCGTaGCAGGCTCACACGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SAGCSWAQTGPFCNPGYRSGRCP*QAHTCC
Trigger: ACAGCACGTGTGAGCCTGCCACGGGCACCTGCCGCT...CCTGTAACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CCGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCCAGCTGGGCCCAAACTaGCCCCTTCTGCAATCCAGG +
Preference number: 4 (lower is better)
Translates to: PQSQCRVQLGPNWPLLQSQLGPN*PLLQSR
Trigger: CCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTG...GGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCACTACTAGTGCCTCGCTaGTCCACCGCTCCGGGATGT +
Preference number: 4 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSLLVPR*STAPGC
Trigger: ACATCCCGGAGCGGTGGACCAGCGAGGCACTAGTAG...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCACGCCCGCGCCCAAAGTaGCACCGCGGAGACCTGATC +
Preference number: 4 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPRPRPK*HRGDLI
Trigger: GATCAGGTCTCCGCGGTGCCACTTTGGGCGCGGGCG...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp TTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCAGGTCCCTCCGTTCTaGCAGAGGCAGGAATGCCGA +
Preference number: 4 (lower is better)
Translates to: FLQEQVCSQPTPNRFWGQQVPPF*QRQECR
Trigger: TCGGCATTCCTGCCTCTGCCAGAACGGAGGGACCTG...CTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCTAATCCAGGTTACAGGTaGCTCCTGAGCGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RPHLSSVQLRAAGRAGLPNPGYR*LLSALV
Trigger: CACCAGGGCGCTCAGGAGCCACCTGTAACCTGGATT...AGGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCACAGGAGCCCCCGTTaGGACACCCACACAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPHRSPR*DTHTAV
Trigger: AACAGCTGTGTGGGTGTCTCAACGGGGGCTCCTGTG...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp GTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTAGTGACACTGCCCACTaGCAGGGTCGCAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: VTVQGAAGPKLAPSAIQVSDTAH*QGRSQP
Trigger: GGGCTGACTGCGACCCTGTCAGTGGGCAGTGTCACT...AACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCACTTCTACGGACACAATaGCTGCCGTCCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSLLRTQ*LPSSWS
Trigger: GCTCCAGGAGGACGGCAGGCATTGTGTCCGTAGAAG...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTACCTGTGCATGCAGCTaGCGTTCCTGTTGGCACACG +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSTCACS*RSCWHT
Trigger: CGTGTGCCAACAGGAACGGCAGCTGCATGCACAGGT...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGACCTGTGCATGCAGCTaGCGTTCCTGTTGGCACACG +
Preference number: 4 (lower is better)
Translates to: PPFLQEQVCSQPTPNRFWTCACS*RSCWHT
Trigger: CGTGTGCCAACAGGAACGGCAGCTGCATGCACAGGT...CCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCTGGCACCTGTGCATaGAGCTGCCGTTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPPGTCA*SCRSCW
Trigger: CCAACAGGAACGGCAGCTGCATGCACAGGTGCCAGG...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCTGGCACCTGTGCATaGAGCTGCCGTTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCPGTCA*SCRSCW
Trigger: CCAACAGGAACGGCAGCTGCATGCACAGGTGCCAGG...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGGCTCCTCCAGGGGGCTaGAGCCCCTACGGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLAPPGG*SPYGPR
Trigger: ACGAGGACCGTAGGGGCTGCAGCCCCCTGGAGGAGC...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAGGCAGCTCCGGCGGTaGAGTTGCAGGCACTGCGAC +
Preference number: 4 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPRQLRR*SCRHCD
Trigger: GTCGCAGTGCCTGCAACTGCACCGCCGGAGCTGCCT...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCTCGCAGGCCGCCCCCTaGCCACACCCACACACGTGG +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLISQAAP*PHPHTW
Trigger: CCACGTGTGTGGGTGTGGGCAGGGGGCGGCCTGCGA...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAAGGCCGCAGCGGCAGGTaGCCGTGGCAGGCTCACACG +
Preference number: 4 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKGRSGR*PWQAHT
Trigger: CGTGTGAGCCTGCCACGGGCACCTGCCGCTGCGGCC...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCTTTCCACACTCCGTCTaGACCCCAGTCCGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGFPHSV*TPVRLS
Trigger: AGAGAGACGGACTGGGGTGCAGACGGAGTGTGGAAA...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCAGCTGCCGTTCCTGTTaGCACACGGGCTTCTACGGA +
Preference number: 4 (lower is better)
Translates to: PQGHTSLQERQVAGLSTASCRSC*HTGFYG
Trigger: TCCGTAGAAGCCCGTGTGCCAACAGGAACGGCAGCT...GGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGAGCAGCCGCCGTTGTTaGCCTCACAGCTGTTCACGA +
Preference number: 4 (lower is better)
Translates to: PPFLQEQVCSQPTPNRFWSSRRC*PHSCSR
Trigger: TCGTGAACAGCTGTGAGGCCAACAACGGCGGCTGCT...CCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCACAGGGGCCCAGCACTaGTGTGGCTGCAGCCATGGG +
Preference number: 4 (lower is better)
Translates to: STRSSGPVKCPSQWSPKATGAQH*CGCSHG
Trigger: CCCATGGCTGCAGCCACACCAGTGCTGGGCCCCTGT...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCAGGAGCCGGCCAGGTTaGTGCAGTGGTGCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: STRSSGPVKCPSQWSPKARSRPG*CSGARS
Trigger: GCTGCGAGCACCACTGCACCAACCTGGCCGGCTCCT...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCGACGTCGTCATCCTaGAAGAGTTGCGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCPTSSS*KSCGSS
Trigger: CGAGCTGCCGCAACTCTTCCAGGATGACGACGTCGG...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCTGGGGCTGCACACACTaGCACTCCTCCGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: STRSSGPVKCPSQWSPKAWGCTH*HSSEQP
Trigger: GGGCTGCTCGGAGGAGTGCCAGTGTGTGCAGCCCCA...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CTCCATGTTGACACCAGCACAACCCCTGGCAGCCAGCCCCGTGGAAGCCAGGGGCAAGAGCACCTTGTCTaGCAGCTGGGACCATACCAG +
Preference number: 4 (lower is better)
Translates to: LHVDTSTTPGSQPRGSQGQEHLV*QLGPYQ
Trigger: CTGGTATGGTCCCAGCTGCCAGACAAGGTGCTCTTG...CCCCTGGCTTCCACGGGGCTGGCTGCCAGGGGTTGTGCTGGTGTCAACATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGACACGTGGGTGCAGTTaGGGCCGAAGCGGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLTRGCS*GRSGPA
Trigger: CGCAGGGCCGCTTCGGCCCCAACTGCACCCACGTGT...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp AGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTACAGGCCACACCCACACACGTaGGTGCAGTTGGGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: SAGCSWAQTGPFCNPGYRPHPHT*VQLGPK
Trigger: CTTCGGCCCCAACTGCACCCACGTGTGTGGGTGTGG...CCTGTAACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCACACGTGCTGTTGTTGTaGCAGGAGCACTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: AVAGVAQAPISAGAGVLAHVLLL*QEHSRW
Trigger: CCATCTGGAGTGCTCCTGCCACAACAACAGCACGTG...TGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCAGGGTCCCCTCTGGCTaGGACTGGAGAGGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCRVPSG*DWRGGL
Trigger: GAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCT...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACAAGTGTCCTTCTCAGTaGTCACCAAAGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: WSPKARVPSGWDWRGGLHKCPSQ*SPKARV
Trigger: GACCCTGGCCTTTGGTGACCACTGAGAAGGACACTT...GTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCCCCAGAGCGTGCCCCTaGGTTCTGCAGAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCPRACP*VLQSQA
Trigger: GGCCTGGCTCTGCAGAACCCAGGGGCACGCTCTGGG...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACGGGACTGCCTCTAGCGGGCATGTGCAGTaGCCCATAAATACCTTTACA +
Preference number: 4 (lower is better)
Translates to: ARVPSGWDWRGGLHGTASSGHVQ*PINTFT
Trigger: TGTAAAGGTATTTATGGGCCACTGCACATGCCCGCT...AGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCACACCAGCACAACCCCTaGCAGCCAGCCCCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPHQHNP*QPAPWK
Trigger: CTTCCACGGGGCTGGCTGCCAGGGGTTGTGCTGGTG...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GCCTCAGCCCATGAGTGCCAGGTGCTCGGGAGGGCTGGTCTGTCCTCACCCAGGACTTCTTCACTTGTGTaGCACCCCCACCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: ASAHECQVLGRAGLSSPRTSSLV*HPHPCK
Trigger: TTTGCAGGGGTGGGGGTGCCACACAAGTGAAGAAGT...CCTGGGTGAGGACAGACCAGCCCTCCCGAGCACCTGGCACTCATGGGCTGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCGGTGCTCGGGAGGGCTaGTCTGTCCTCACCCAGGGA +
Preference number: 4 (lower is better)
Translates to: STRSSGPVKCPSQWSPKAGAREG*SVLTQG
Trigger: TCCCTGGGTGAGGACAGACCAGCCCTCCCGAGCACC...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTCCTCCCTGCTATTCCTaGGAGAATCTCCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTPPCYS*ENLLSC
Trigger: ACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGG...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAGGACCCCTGGGTGTTaGGGCAGCCATGGGCACACT +
Preference number: 4 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPRTPGC*GSHGHT
Trigger: AGTGTGCCCATGGCTGCCTCAACACCCAGGGGTCCT...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAACGCAGCCATCGGCACTaGGCCGGTAGCCGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKRSHRH*AGSRRS
Trigger: GCTACGCCGGCTACCGGCTCAGTGCCGATGGCTGCG...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp CAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGAAGTCTCATTGCAGATaGGCCCAGTCCAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: QSQCRVQLGPNWPLLQSRKSHCR*AQSSPR
Trigger: CCGAGGGCTGGACTGGGCTCATCTGCAATGAGACTT...CCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCACTTCTACGGACACAATaGCTGCCGTCCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RSHSAGCSWAQTGPFCNPLLRTQ*LPSSWS
Trigger: GCTCCAGGAGGACGGCAGGCATTGTGTCCGTAGAAG...TGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGGCAGCACGGGCTGTCTaGACAGTCGTCGACATCGAT +
Preference number: 4 (lower is better)
Translates to: QSQCRVQLGPNWPLLQSRAARAV*TVVDID
Trigger: ATCGATGTCGACGACTGTGCAGACAGCCCGTGCTGC...CCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTTTGTTGGTGCACACCTaGTGGCAGCACGGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCLLVHT*WQHGLS
Trigger: AGACAGCCCGTGCTGCCAGCAGGTGTGCACCAACAA...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGTTGTTGGTGCACACCTaGTGGCAGCACGGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: VAGSHVLLLWQEHSRWQALLVHT*WQHGLS
Trigger: AGACAGCCCGTGCTGCCAGCAGGTGTGCACCAACAA...CGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGAGCTGCAGGAGAAGCTaGAGTTCTTCCCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGSCRRS*SSSQRC
Trigger: ACACCTTTGGGAAGAACTGCAGCTTCTCCTGCAGCT...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCTTGCAGGAGCAGCTaGCATCCCTCTTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPPCRSS*HPSCHR
Trigger: CCTGTGACAAGAGGGATGGCAGCTGCTCCTGCAAGG...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAGGGACCATACCAGCCTaGTGGGCACACGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPGTIPA*WAHVLA
Trigger: TGCCAGGACGTGTGCCCAGCAGGCTGGTATGGTCCC...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CAGGTGCCCGTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGAGTGGCTGGGTGGCAGTaGCCATCATTGGCACAAGAG +
Preference number: 4 (lower is better)
Translates to: QVPVAGSHVLLLWQEHSRVAGWQ*PSLAQE
Trigger: CTCTTGTGCCAATGATGGGCACTGCCACCCAGCCAC...TCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCACGGGCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTGCAGTTGCAGGCACTaGGACAGTCCAATCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTCSCRH*DSPIQR
Trigger: TCTTTGGATTGGACTGTCGCAGTGCCTGCAACTGCA...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCAGGCAACCGCCGCTGTaGCGGCAGCCAGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIRQPPL*RQPALT
Trigger: CGTCAGAGCTGGCTGCCGGCACAGCGGCGGTTGCCT...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCTGGAGGCGGGCAGTGTaGCCGCTGAGCCCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIWRRAV*PLSPGL
Trigger: TAGCCCAGGGCTCAGCGGGCACACTGCCCGCCTCCA...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCACTGGGTCCGGGATGTGGGTCTaGTGGAGGCGGGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: LGLSGNECSPSVLLNSTGSGMWV*WRRAVC
Trigger: GCACACTGCCCGCCTCCAGCAGACCCACATCCCGGA...CCCAGTGCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCCGTGCCCCTGGGTTCTaGAGAGCCAGGCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIRAPGF*RARPGG
Trigger: GCCTCCTGGCCTGGCTCTGCAGAACCCAGGGGCACG...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGTCGCCGGGTCCACCCTaGAGGAACTCGCCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: LYVVSLYASLLFLGESPESPGPP*RNSPRR
Trigger: GCGCCGGGGCGAGTTCCTGCAGGGTGGACCCGGCGA...CTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CAGTCTCTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCCAAGGTCGCTGCAGGTaGGGAGCGTCCCGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QSLGLSGNECSPSVLLNSQGRCR*GASRLP
Trigger: GGGAAGCCGGGACGCTCCGCACCTGCAGCGACCTTG...GCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAGAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GTGGCAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGTGGCAGAGGCAGGAATaGCGACAGTTGTCGCCGTAC +
Preference number: 4 (lower is better)
Translates to: VAGSHVLLLWQEHSRWQAWQRQE*RQLSPY
Trigger: GTACGGCGACAACTGTCGGCATTCCTGCCTCTGCCA...CGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCACCCATGAGTGCCAGGTaGTCGGGAGGGCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPPMSAR*SGGLVC
Trigger: ACAGACCAGCCCTCCCGAGCACCTGGCACTCATGGG...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCATCTCTCTCTGGCTGCTaGTTCTGCATCCCCACCATC +
Preference number: 4 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSSLSGC*FCIPTI
Trigger: GATGGTGGGGATGCAGAAGCAGCAGCCAGAGAGAGA...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCAACCCGGGCCGGCACTaGCAGCGATGCCGAGTGATT +
Preference number: 4 (lower is better)
Translates to: STRSSGPVKCPSQWSPKANPGRH*QRCRVI
Trigger: AATCACTCGGCATCGCTGCCAGTGCCGGCCCGGGTT...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGCAGCCATGGGCACACTaGGCCAGCCCTGCGGCACAT +
Preference number: 4 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLQPWAH*ASPAAH
Trigger: ATGTGCCGCAGGGCTGGCCCAGTGTGCCCATGGCTG...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTCCGACGTCGTCATCCTaGAAGAGTTGCGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: VTVQGAAGPKLAPSAIQVPTSSS*KSCGSS
Trigger: CGAGCTGCCGCAACTCTTCCAGGATGACGACGTCGG...AACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCTGGGGCTGCACACACTaGCACTCCTCCGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCWGCTH*HSSEQP
Trigger: GGGCTGCTCGGAGGAGTGCCAGTGTGTGCAGCCCCA...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCGGCAGTGCCCATCATTaGCACAAGAGCACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: HTSLQERQVAGLSTALHGGSAHH*HKSTLS
Trigger: AGACAAGGTGCTCTTGTGCCAATGATGGGCACTGCC...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CAGTCTCTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCCACCGCTCCGGGATGTaGGTCTGCTGGAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: QSLGLSGNECSPSVLLNSHRSGM*VCWRRA
Trigger: TGCCCGCCTCCAGCAGACCCACATCCCGGAGCGGTG...GCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAGAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTAGGGTTTCTGGGGATTaGGCAGGAGATGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSRVSGD*AGDDRQ
Trigger: CTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCT...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCACACACCGGCACCGTGTaGCTTAAGGCCTGCACGCAC +
Preference number: 4 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPHTGTV*LKACTH
Trigger: GTGCGTGCAGGCCTTAAGCCACACGGTGCCGGTGTG...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CAGTCTCTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCATGAGCAGGTCCCGGTaGCAGGGTGGCAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: QSLGLSGNECSPSVLLNSMSRSR*QGGRPG
Trigger: ACCCGGCCTGCCACCCTGCCACCGGGACCTGCTCAT...GCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAGAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCACAGCCCTCCTCCCCCTaGGCCATTCTCTGGGAACAG +
Preference number: 4 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPQPSSP*AILWEQ
Trigger: CTGTTCCCAGAGAATGGCCCAGGGGGAGGAGGGCTG...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCTCTCTTCCTTCCACTCTaGGCCCTTCTTCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: RPHLSSVQLRAAGRAGLPLFLPL*ALLPGE
Trigger: TTCTCCTGGAAGAAGGGCCCAGAGTGGAAGGAAGAG...AGGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp TCACAGAAGTGGCCGTGGAAGCCGGCAGGGCAGAGGCATCGGCCACTGATGGGGCATTCGTCCACATCTTaGCAAGTCTCGCCATCACCC +
Preference number: 4 (lower is better)
Translates to: SQKWPWKPAGQRHRPLMGHSSTS*QVSPSP
Trigger: GGGTGATGGCGAGACTTGCCAAGATGTGGACGAATG...CCCCATCAGTGGCCGATGCCTCTGCCCTGCCGGCTTCCACGGCCACTTCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCACAGACACAGGCCGCTaGTGGCATCACAGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: STRSSGPVKCPSQWSPKATDTGR*WHHSSR
Trigger: ACGGGAGCTGTGATGCCATCAGCGGCCTGTGTCTGT...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCCGCAGGCAGGGGCTCTaGCACTTGTCCCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIRRQGL*HLSPVQ
Trigger: CTGGACTGGGGACAAGTGTCAGAGCCCCTGCCTGCG...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAAAGAGGCATCGGCCACTaGTGGGGTCGCAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKRGIGH*WGRRGL
Trigger: GAGCCCCCTGCGACCCCATCAGTGGCCGATGCCTCT...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAGCAGCCCTCTCCAAATaGACCTGGCTCACACCCCCT +
Preference number: 4 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPAALSK*TWLTPP
Trigger: AGGGGGTGTGAGCCAGGTTCATTTGGAGAGGGCTGC...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCCGGCACTGGCAGCGATaGCGAGTGATTGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: STRSSGPVKCPSQWSPKARHWQR*RVIVSW
Trigger: CCAGCTCACAATCACTCGGCATCGCTGCCAGTGCCG...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GCAGCCCCAGCGTTCTCCTCAATAGCACTGGGAACTGAGATGAGTCCCAACTTCAGGTTGGTGCAGTGGTaGTCGCAGCCGCCACGGCTG +
Preference number: 4 (lower is better)
Translates to: AAPAFSSIALGTEMSPNFRLVQW*SQPPRL
Trigger: CAGCCGTGGCGGCTGCGAGCACCACTGCACCAACCT...GAAGTTGGGACTCATCTCAGTTCCCAGTGCTATTGAGGAGAACGCTGGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CTCCATGTTGACACCAGCACAACCCCTGGCAGCCAGCCCCGTGGAAGCCAGGGGCATCACAGGTCAAGCTaGAGTCATGGCCAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: LHVDTSTTPGSQPRGSQGHHRSS*SHGQRS
Trigger: ACTCCTTTGGCCATGACTGCAGCTTGACCTGTGATG...CCCCTGGCTTCCACGGGGCTGGCTGCCAGGGGTTGTGCTGGTGTCAACATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGGACTGCGTGTGGGGCTaGACACACTGGCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLDCVWG*THWHSS
Trigger: GGAGGAGTGCCAGTGTGTGCAGCCCCACACGCAGTC...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCACGCCCACTGGGCAGGTaGATGCCTGCCAGCACCCCG +
Preference number: 4 (lower is better)
Translates to: LFTPPCYSWENLLSCIHSRPLGR*MPASTP
Trigger: CGGGGTGCTGGCAGGCATGCACCTGCCCAGTGGGCG...TGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCACGTCCTGGCAGCGGCTaGCGACGAAGCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LFTPPCYSWENLLSCIHSRPGSG*RRSQGG
Trigger: GCCTCCCTGGCTTCGTCGGCAGCCGCTGCCAGGACG...TGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGGGGACCATACCAGCCTaGTGGGCACACGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLGTIPA*WAHVLA
Trigger: TGCCAGGACGTGTGCCCAGCAGGCTGGTATGGTCCC...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAAGGGCCGAAGCGGCCCTaGGGACAGGTGAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKGPKRP*GQVRLQ
Trigger: CTGCAACCTCACCTGTCCGCAGGGCCGCTTCGGCCC...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTTGGCAGGCTCACACGTaGTGTTGTTGTGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VTVQGAAGPKLAPSAIQVWQAHT*CCCGRS
Trigger: GCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCA...AACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAACCCTGTGCCTGCACCTaGGCCTGCACCCACACTGGC +
Preference number: 4 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKPCACT*ACTHTG
Trigger: GCCAGTGTGGGTGCAGGCGCAGGTGCAGGCACAGGG...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAACAGTGGCCCTGTGCCTaGACCTGCGCCTGCACCCAC +
Preference number: 4 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKQWPCA*TCACTH
Trigger: GTGGGTGCAGGCGCAGGTGCAGGCACAGGGCCACTG...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCCAAGGAACGACATCGTaGGCGCCGGTGCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIQGTTS*APVPPP
Trigger: CGGAGGAGGCACCGGCGCGCACGATGTCGTTCCTTG...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCAACAGAGGCTGGCGCTaGATTCAGCCGAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: STRSSGPVKCPSQWSPKANRGWR*IQPRGS
Trigger: GCTGCCTCTCGGCTGAATGCAGCGCCAGCCTCTGTT...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCCGCAGCCGCCACGGCTaGAGGCGCACTCATCCACAT +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIRSRHG*RRTHPH
Trigger: ATGTGGATGAGTGCGCCTCCAGCCGTGGCGGCTGCG...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCAGGAGCCGGCCAGGTTaGTGCAGTGGTGCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIRSRPG*CSGARS
Trigger: GCTGCGAGCACCACTGCACCAACCTGGCCGGCTCCT...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTGTCAAGCTGCAGTCATaGCCAAAGGAGTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSVKLQS*PKESSR
Trigger: CCTGGATGACTCCTTTGGCCATGACTGCAGCTTGAC...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCATACATAAATACGGGCTaGGCGACTTCCAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSYINTG*ATSSPR
Trigger: CCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTA...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCAAGCGGGCATGTGCAGTaGCCCATAAATACCTTTACA +
Preference number: 4 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPSGHVQ*PINTFT
Trigger: TGTAAAGGTATTTATGGGCCACTGCACATGCCCGCT...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CTCCTCCTCCTGCTGGTGAAATTGTCTGCCCTGGGGCCTCAGCTACCTTGGCTGTTCTCACCGGGACACTaGCACATCTGCGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: LLLLLVKLSALGPQLPWLFSPGH*HICAQS
Trigger: GGACTGTGCGCAGATGTGCCAGTGTCCCGGTGAGAA...CAGCCAAGGTAGCTGAGGCCCCAGGGCAGACAATTTCACCAGCAGGAGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp AGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTACAGGTTCTCACCGGGACACTaGCACATCTGCGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: SAGCSWAQTGPFCNPGYRFSPGH*HICAQS
Trigger: GGACTGTGCGCAGATGTGCCAGTGTCCCGGTGAGAA...CCTGTAACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTAGCAACCAAGCTCACTaGACTCCTCCTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCSNQAH*TPPPPA
Trigger: AGCAGGAGGAGGAGGAGTCCAGTGAGCTTGGTTGCT...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCGATCTGAGAACGTCTTaGTCGTCGTTGCTTCATGTC +
Preference number: 4 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSDLRTS*SSLLHV
Trigger: GACATGAAGCAACGACGACCAAGACGTTCTCAGATC...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGGGCTTCTTTCTCTTCTaGCTGGAGAACGTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGGFFLF*LENVSK
Trigger: CTTAGAGACGTTCTCCAGCCAGAAGAGAAAGAAGCC...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp AGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTAGACAAACTTCTCTGTaGGCGTGTGTTCGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: SHSAGCSWAQTGPFCNPGRQTSL*ACVRPA
Trigger: TGCGGGGCGAACACACGCTCACAGAGAAGTTTGTCT...ACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR TCA 90 bp GCAGCCCCAGCGTTCTCCTCAATAGCACTGGGAACTGAGATGAGTCCCAACTTCTGGCTGGTTTTAGGGTaGTGGGGGCGGCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: AAPAFSSIALGTEMSPNFWLVLG*WGRQPR
Trigger: TCTGGGCTGCCGCCCCCATCACCCTAAAACCAGCCA...GAAGTTGGGACTCATCTCAGTTCCCAGTGCTATTGAGGAGAACGCTGGGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCAGTCGTCGACATCGATaGAGGTCCTCTGATCTGTGT +
Preference number: 4 (lower is better)
Translates to: PQGHTSLQERQVAGLSTASRRHR*RSSDLC
Trigger: ACACAGATCAGAGGACCTGCATCGATGTCGACGACT...GGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGAGTCGTCGACATCGATaGAGGTCCTCTGATCTGTGT +
Preference number: 4 (lower is better)
Translates to: PPFLQEQVCSQPTPNRFWSRRHR*RSSDLC
Trigger: ACACAGATCAGAGGACCTGCATCGATGTCGACGACT...CCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCGCAGCACGGGCTGTCTaGACAGTCGTCGACATCGAT +
Preference number: 4 (lower is better)
Translates to: STRSSGPVKCPSQWSPKAAARAV*TVVDID
Trigger: ATCGATGTCGACGACTGTGCAGACAGCCCGTGCTGC...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCTTGTTGGTGCACACCTaGTGGCAGCACGGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: STRSSGPVKCPSQWSPKALLVHT*WQHGLS
Trigger: AGACAGCCCGTGCTGCCAGCAGGTGTGCACCAACAA...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCCGCCAGGGTTGTTGGTaGACACCTGCTGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIRQGCW*TPAGST
Trigger: CGTGCTGCCAGCAGGTGTGCACCAACAACCCTGGCG...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CCCGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCACCATTCTGACAGCTaGAGGAGAAGCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PAVTVQGAAGPKLAPSAIHHSDS*RRSCSS
Trigger: AGAACTGCAGCTTCTCCTGCAGCTGTCAGAATGGTG...GATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCCGGTTGGCACAGTTaGATTTCTTGCGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPPGWHS*ISCDSA
Trigger: AGCACTGTCGCAAGAAATGCAACTGTGCCAACCGGG...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCATCCCGTGGCCAGCGCTaGAGTTGCAGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LFTPPCYSWENLLSCIHSSRGQR*SCRGGC
Trigger: GCAGCCACCCCTGCAACTGCAGCGCTGGCCACGGGA...TGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CCCGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCTGCAGTTGCAGGCACTaGGACAGTCCAATCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PAVTVQGAAGPKLAPSAICSCRH*DSPIQR
Trigger: TCTTTGGATTGGACTGTCGCAGTGCCTGCAACTGCA...GATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR GCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCCTCCGGCGGTGCAGTTaGAGGCACTGCGACAGTCCA +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLILRRCS*RHCDSP
Trigger: TGGACTGTCGCAGTGCCTGCAACTGCACCGCCGGAG...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCCCAAGAGCGACAGGTTaGTGGGCTGTCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCPRATG*WAVHSP
Trigger: AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGG...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCCTCTTCCAGCGGCCATaGGAGGCTTCCCTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCLFQRP*EASLLK
Trigger: CTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAG...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCAGTGGCCCTGTGCCTaGACCTGCGCCTGCACCCAC +
Preference number: 4 (lower is better)
Translates to: LYVVSLYASLLFLGESPEQWPCA*TCACTH
Trigger: GTGGGTGCAGGCGCAGGTGCAGGCACAGGGCCACTG...CTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCAGTGTGGCTTAAGGCCTaGACGCACGGCTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: LFTPPCYSWENLLSCIHSVWLKA*THGWRR
Trigger: CCGCCGCCAGCCGTGCGTGCAGGCCTTAAGCCACAC...TGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAATTGGCCACCCCACTCTaGAGAGGAGCCCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKLATPL*RGAPSH
Trigger: GTGGCTGGGGGCTCCTCTGCAGAGTGGGGTGGCCAA...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCACTGGGTTCACGCACCGGTGCTaGCAGCCACCGTTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LGLSGNECSPSVLLNSTGFTHRC*QPPLWV
Trigger: AACCCACAACGGTGGCTGCCAGCACCGGTGCGTGAA...CCCAGTGCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCACCCGCCAGGGTTGTTaGTGCACACCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLITRQGC*CTPAGS
Trigger: GCTGCCAGCAGGTGTGCACCAACAACCCTGGCGGGT...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGGTCAAGCTGCAGTCATaGCCAAAGGAGTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: QSQCRVQLGPNWPLLQSRVKLQS*PKESSR
Trigger: CCTGGATGACTCCTTTGGCCATGACTGCAGCTTGAC...CCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GCAGCCCCAGCGTTCTCCTCAATAGCACTGGGAACTGAGATGAGTCCCAACTTCAGCGTGCTGGCATGCTaGGCAGATCTCCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AAPAFSSIALGTEMSPNFSVLAC*ADLLAA
Trigger: GGCTGCCAGGAGATCTGCCCAGCATGCCAGCACGCT...GAAGTTGGGACTCATCTCAGTTCCCAGTGCTATTGAGGAGAACGCTGGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CAGGCTCACACGTGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGGCTCGGCAGTGCCCATCATTaGCACAAGAGCACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: QAHTCCCCGRSTPDGRRLGSAHH*HKSTLS
Trigger: AGACAAGGTGCTCTTGTGCCAATGATGGGCACTGCC...GAGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCAGCTGCAGTGTCCGGTaGCTGGGTGGCAGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLISCSVR*LGGSAH
Trigger: ATGGGCACTGCCACCCAGCCACCGGACACTGCAGCT...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CAGTCTCTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCAGCTGCAGTGTCCGGTaGCTGGGTGGCAGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: QSLGLSGNECSPSVLLNSSCSVR*LGGSAH
Trigger: ATGGGCACTGCCACCCAGCCACCGGACACTGCAGCT...GCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAGAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGCAGCTGGGCCCAAACTaGCCCCTTCTGCAATCCAGG +
Preference number: 4 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLQLGPN*PLLQSR
Trigger: CCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTG...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCAGTGCAGGGTGCAGCTaGGCCCAAACTGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLISAGCS*AQTGPF
Trigger: GAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACT...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCACAGTACCAGGAGCTCTaGGCCCGTGAAGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPQYQEL*AREVSF
Trigger: GAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTG...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GCAGCCCCAGCGTTCTCCTCAATAGCACTGGGAACTGAGATGAGTCCCAACTTCCGGTCCGGGCCTCCGTaGTATACACCTGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: AAPAFSSIALGTEMSPNFRSGPP*YTPACS
Trigger: GCTACAGGCAGGTGTATACCACGGAGGCCCGGACCG...GAAGTTGGGACTCATCTCAGTTCCCAGTGCTATTGAGGAGAACGCTGGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GCCTCAGCCCATGAGTGCCAGGTGCTCGGGAGGGCTGGTCTGTCCTCACCCAGGAACATCACAGTTTTCTaGCTCTCCGTGTTTCTCACG +
Preference number: 4 (lower is better)
Translates to: ASAHECQVLGRAGLSSPRNITVF*LSVFLT
Trigger: CGTGAGAAACACGGAGAGCCAGAAAACTGTGATGTT...CCTGGGTGAGGACAGACCAGCCCTCCCGAGCACCTGGCACTCATGGGCTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGTCTTTCTCTTCTGGCTaGAGAACGTCTCTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGSFSSG*RTSLRA
Trigger: TGCTCTTAGAGACGTTCTCCAGCCAGAAGAGAAAGA...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCACTGGGGAGATTTCCTCCGGATaGGCAGAAGCTCGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LGLSGNECSPSVLLNSTGEISSG*AEARPA
Trigger: GGCAGGCCGAGCTTCTGCCCATCCGGAGGAAATCTC...CCCAGTGCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp CTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCAACGGTTCTCCGCTCATaGCCCACGCACCACGCCTGC +
Preference number: 4 (lower is better)
Translates to: LFTPPCYSWENLLSCIHSTVLRS*PTHHAC
Trigger: GCAGGCGTGGTGCGTGGGTCATGAGCGGAGAACCGT...TGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTCACTGGGAACTGAGATaGGTCCCAACTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSHWELR*VPTSSL
Trigger: AAGTGAAGAAGTTGGGACTCATCTCAGTTCCCAGTG...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCATCCTATGTTGCGGTGTaGGTGCAGCCCTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPSYVAV*VQPSPL
Trigger: CAATGGAGAGGGCTGCACTCACACCGCAACATAGGA...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCCATTTCCAGGCTGACTaGGATCATTCACCTTTAGAT +
Preference number: 4 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSHFQAD*DHSPLD
Trigger: ATCTAAAGGTGAATGATCTCAGTCAGCCTGGAAATG...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp GCAGCCCCAGCGTTCTCCTCAATAGCACTGGGAACTGAGATGAGTCCCAACTTCACTGAGCGGGATGAGTaGTTGGTACCTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: AAPAFSSIALGTEMSPNFTERDE*LVPARP
Trigger: GGGCCTGGCAGGTACCAATCACTCATCCCGCTCAGT...GAAGTTGGGACTCATCTCAGTTCCCAGTGCTATTGAGGAGAACGCTGGGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp TCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCATCACAGGTCAAGCTaGAGTCATGGCCAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: SRPHQPPRATGCWAVHSPHHRSS*SHGQRS
Trigger: ACTCCTTTGGCCATGACTGCAGCTTGACCTGTGATG...AGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGGTGGCTGGGTGGCAGTaGCCATCATTGGCACAAGAG +
Preference number: 4 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLVAGWQ*PSLAQE
Trigger: CTCTTGTGCCAATGATGGGCACTGCCACCCAGCCAC...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCAGGGGCACAGTGGCACTaGCCGTGGACAGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: LFTPPCYSWENLLSCIHSGAQWH*PWTGSQ
Trigger: CTGTGACCCTGTCCACGGGCAGTGCCACTGTGCCCC...TGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CTCCTCCTCCTGCTGGTGAAATTGTCTGCCCTGGGGCCTCAGCTACCTTGGCTGCACGAGGAGGTTGCCTaGTCCTTTACCTTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: LLLLLVKLSALGPQLPWLHEEVA*SFTFLG
Trigger: ACCTAGGAAGGTAAAGGAGCAGGCAACCTCCTCGTG...CAGCCAAGGTAGCTGAGGCCCCAGGGCAGACAATTTCACCAGCAGGAGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCACTCAGCGGTAATGAATaGAGCCCCAGCGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPLSGNE*SPSVLL
Trigger: GAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAG...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCTCTTTACGCCTCCCTaGTATTCCTGGGAGAATCTC +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCLFTPP*YSWENL
Trigger: GAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCTATTTTTCCACCTTGTaGATTTCCAGGCTGACTGAG +
Preference number: 4 (lower is better)
Translates to: APTPVLSPTQSRGESGTSYFSTL*ISRLTE
Trigger: CTCAGTCAGCCTGGAAATGCACAAGGTGGAAAAATA...GGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAAGTCCTGCTGTCAGTGTaGAGCCGGAAGCCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKVLLSV*SRKPGL
Trigger: CAAGCCCGGCTTCCGGCTCCACACTGACAGCAGGAC...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAAACCATACCAGCCTGCTaGGCACACGTCCTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKTIPAC*AHVLAA
Trigger: CGCTGCCAGGACGTGTGCCCAGCAGGCTGGTATGGT...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCAGGGCAGCTGCAGCGCTaGGCACAGGCCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: LFTPPCYSWENLLSCIHSGQLQR*AQASPN
Trigger: GTTTGGAGAGGCCTGTGCCCAGCGCTGCAGCTGCCC...TGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAACCACACCCACACACGTaGGTGCAGTTGGGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKPHPHT*VQLGPK
Trigger: CTTCGGCCCCAACTGCACCCACGTGTGTGGGTGTGG...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCAAGCAGCTGCCGTTGCTaGCGTGGCACAGGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: LFTPPCYSWENLLSCIHSSSCRC*RGTGPH
Trigger: ATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCT...TGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGAATCCAGGTTACAGGTaGCTCCTGAGCGCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLNPGYR*LLSAGA
Trigger: AGCACCGGCGCTCAGGAGCCACCTGTAACCTGGATT...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294599.8
CDS-3UTR CCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCAGAGCGACAGGTTGCTaGGCTGTCCACAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIRATGC*AVHSPP
Trigger: TGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCT...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCCAGGTCCCTCCGTTCTaGCAGAGGCAGGAATGCCGA +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIQVPPF*QRQECR
Trigger: TCGGCATTCCTGCCTCTGCCAGAACGGAGGGACCTG...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTGTCGGGGGTTCCCATTaGGGAGTAATGGTGATATTC +
Preference number: 4 (lower is better)
Translates to: ASLLKATPASKSDRLLGCVGGSH*GVMVIF
Trigger: GAATATCACCATTACTCCCCAATGGGAACCCCCGAC...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CAA 72 bp AAGCTCACTGGACTCCTCCTCCTCCTGCTGGTGAAATaGTCTGCCCTGGGGCCTCAGCTACCTTGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: KLTGLLLLLLVK*SALGPQLPWLV
Trigger: AACCAGCCAAGGTAGCTGAGGCCCCAGGGCAGACAATTTCACCAGCAGGAGGAGGAGGAGTCCAGTGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGAGACAAACTTCTCTGTaGGCGTGTGTTCGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLRQTSL*ACVRPA
Trigger: TGCGGGGCGAACACACGCTCACAGAGAAGTTTGTCT...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCAGACAAACTTCTCTGTaGGCGTGTGTTCGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCRQTSL*ACVRPA
Trigger: TGCGGGGCGAACACACGCTCACAGAGAAGTTTGTCT...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCCATCAGCTTCCTCTGTaGCAGCTCCCTTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCHQLPL*QLPCCL
Trigger: CAGACAGCAAGGGAGCTGTCACAGAGGAAGCTGATG...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACTACACAGTGATGTTTTaGTACATGGGATGTCTAGTG +
Preference number: 4 (lower is better)
Translates to: WSPKARVPSGWDWRGGLHYTVMF*YMGCLV
Trigger: CACTAGACATCCCATGTATCAAAACATCACTGTGTA...GTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCAGTGTTCACGCACCGGTaGTGGCAGCCACCGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LFTPPCYSWENLLSCIHSVFTHR*WQPPLW
Trigger: CCACAACGGTGGCTGCCAGCACCGGTGCGTGAACAC...TGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCCCTTGCAGGAGCAGCTaGCATCCCTCTTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIPCRSS*HPSCHR
Trigger: CCTGTGACAAGAGGGATGGCAGCTGCTCCTGCAAGG...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp CTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGAGTTGCAGGGGTGGCTaGAGTCAGGTCCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LYVVSLYASLLFLGESPESCRGG*SQVPSA
Trigger: GGCACTGGGGACCTGACTGCAGCCACCCCTGCAACT...CTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCGAGAGAGTCCTATGTTaGGGTGTGAGTGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCERVLC*GVSAAL
Trigger: GAGGGCTGCACTCACACCGCAACATAGGACTCTCTC...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCACGTCTTGGTCGTCGTTaGTTCATGTCAATGACTTCT +
Preference number: 4 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSRLGRR*FMSMTS
Trigger: AGAAGTCATTGACATGAAGCAACGACGACCAAGACG...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCAGTGTTGAGGCAGCCATaGGCACACTGGGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LFTPPCYSWENLLSCIHSVLRQP*AHWASP
Trigger: AGGGCTGGCCCAGTGTGCCCATGGCTGCCTCAACAC...TGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCTGCCATAGTAGCCCTTaGGGCAGCCATCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCCHSSP*GSHPHS
Trigger: ACTGTGAGGATGGCTGCCCCAAGGGCTACTATGGCA...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCACCTTGTCTGGCAGCTaGGACCATACCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLITLSGS*DHTSLL
Trigger: CAGCAGGCTGGTATGGTCCCAGCTGCCAGACAAGGT...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCACTGGGCAAGAGCACCTTGTCTaGCAGCTGGGACCATACCAG +
Preference number: 4 (lower is better)
Translates to: LGLSGNECSPSVLLNSTGQEHLV*QLGPYQ
Trigger: CTGGTATGGTCCCAGCTGCCAGACAAGGTGCTCTTG...CCCAGTGCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAATGTCCGGTGGCTGGGTaGCAGTGCCCATCATTGGCA +
Preference number: 4 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKCPVAG*QCPSLA
Trigger: TGCCAATGATGGGCACTGCCACCCAGCCACCGGACA...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCTCACAGTCACAGCGCTaGTGGCAGCCCTCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCSQSQR*WQPSPN
Trigger: ATTTGGAGAGGGCTGCCACCAGCGCTGTGACTGTGA...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCACTGGGGCTCCTGACCGCCGTTaGATAGCTGAGATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LGLSGNECSPSVLLNSTGAPDRR*IAEISS
Trigger: GGAGGAAATCTCAGCTATCCAACGGCGGTCAGGAGC...CCCAGTGCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp CCCTTACCCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCAGGTGCAGGCCCCGCTaGCGTGGTCACAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PLPISIHLSLYVVSLYASRCRPR*RGHRLL
Trigger: GAGCAGCCTGTGACCACGTCAGCGGGGCCTGCACCT...GGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGGGTAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp GCAGCCCCAGCGTTCTCCTCAATAGCACTGGGAACTGAGATGAGTCCCAACTTCCTCCCTTGCTGTCTGTaGGCAACCAAGCTCACTGGA +
Preference number: 4 (lower is better)
Translates to: AAPAFSSIALGTEMSPNFLPCCL*ATKLTG
Trigger: TCCAGTGAGCTTGGTTGCTCACAGACAGCAAGGGAG...GAAGTTGGGACTCATCTCAGTTCCCAGTGCTATTGAGGAGAACGCTGGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CCCTTACCCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCAGCCGGCCAGGTTGGTaGAGTGGTGCTCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PLPISIHLSLYVVSLYASSRPGW*SGARSR
Trigger: GCGGCTGCGAGCACCACTGCACCAACCTGGCCGGCT...GGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGGGTAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATGGAGCCCAAGGTCGCTaGAGGTGCGGAGCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PFPFIYLCTLSLFTPPCYGAQGR*RCGASR
Trigger: CCGGGACGCTCCGCACCTGCAGCGACCTTGGGCTCC...ATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GCAGCCCCAGCGTTCTCCTCAATAGCACTGGGAACTGAGATGAGTCCCAACTTCGCATCCCCACCATCCTaGCCTCCCTTATCACTGTTC +
Preference number: 4 (lower is better)
Translates to: AAPAFSSIALGTEMSPNFASPPS*PPLSLF
Trigger: GAACAGTGATAAGGGAGGGCAGGATGGTGGGGATGC...GAAGTTGGGACTCATCTCAGTTCCCAGTGCTATTGAGGAGAACGCTGGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCGTATCACAGGCTCTCTaGCAGCTAAAGCCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIVSQAL*QLKPVH
Trigger: GTGGACCGGCTTTAGCTGCCAGAGAGCCTGTGATAC...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp AACATCACAGTTTTCTGGCTCTCCGTGTTTCTCACGTATAGTCTGAGGTCAATTCCCAGTCCAGCCGGCTaGGCAGAGGCAGCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: NITVFWLSVFLTYSLRSIPSPAG*AEAAAR
Trigger: ACGGGCCGCTGCCTCTGCCCAGCCGGCTGGACTGGG...AATTGACCTCAGACTATACGTGAGAAACACGGAGAGCCAGAAAACTGTGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCATGCAGCCCTCTCCATTaGCCACCCCACTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LFTPPCYSWENLLSCIHSCSPLH*PPHSAE
Trigger: CTCTGCAGAGTGGGGTGGCCAATGGAGAGGGCTGCA...TGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp CCCTTACCCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCGCACGCACAGTGGCCTaGGACAGGGTCACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PLPISIHLSLYVVSLYASARTVA*DRVTGP
Trigger: GGGACCTGTGACCCTGTCTCAGGCCACTGTGCGTGC...GGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGGGTAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp TATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCAAAGGCAGAGACCGGTaGCAGGGTCACAGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: YLCTLSLFTPPCYSWENLKGRDR*QGHRVP
Trigger: GGGCACCCTGTGACCCTGTCACCGGTCTCTGCCTTT...GAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCGGGAACTGTGGTGACTaGATATCTCAGAGCACCCTC +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIGNCGD*ISQSTL
Trigger: GAGGGTGCTCTGAGATATTCAGTCACCACAGTTCCC...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CAGTCTCTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCCCCGGTTGGCACAGTTaGATTTCTTGCGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: QSLGLSGNECSPSVLLNSPGWHS*ISCDSA
Trigger: AGCACTGTCGCAAGAAATGCAACTGTGCCAACCGGG...GCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAGAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCACTGGGTGCAGTTGCAGGCACTaGGACAGTCCAATCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LGLSGNECSPSVLLNSTGCSCRH*DSPIQR
Trigger: TCTTTGGATTGGACTGTCGCAGTGCCTGCAACTGCA...CCCAGTGCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp TATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTCCGGCGGTGCAGTTaGAGGCACTGCGACAGTCCA +
Preference number: 4 (lower is better)
Translates to: YLCTLSLFTPPCYSWENLLRRCS*RHCDSP
Trigger: TGGACTGTCGCAGTGCCTGCAACTGCACCGCCGGAG...GAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGTGGCAGGCTCACACGTaGTGTTGTTGTGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LYVVSLYASLLFLGESPEWQAHT*CCCGRS
Trigger: GCTCCTGCCACAACAACAGCACGTGTGAGCCTGCCA...CTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp AACATCACAGTTTTCTGGCTCTCCGTGTTTCTCACGTATAGTCTGAGGTCAATTCCCACGCACCACGCCTaGCACCCACAGCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: NITVFWLSVFLTYSLRSIPTHHA*HPQPAF
Trigger: GAAGGCCGGCTGTGGGTGGCAGGCGTGGTGCGTGGG...AATTGACCTCAGACTATACGTGAGAAACACGGAGAGCCAGAAAACTGTGATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp TATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCTGGAGCACGGCAATGTaGGGCAGGGGCCGCACGAAA +
Preference number: 4 (lower is better)
Translates to: YLCTLSLFTPPCYSWENLWSTAM*GRGRTK
Trigger: TTTCGTGCGGCCCCTGCCCCACATTGCCGTGCTCCA...GAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATGCTGGGCACACGTCCTaGCAGCGGCTGCCGACGAAG +
Preference number: 4 (lower is better)
Translates to: PFPFIYLCTLSLFTPPCYAGHTS*QRLPTK
Trigger: CTTCGTCGGCAGCCGCTGCCAGGACGTGTGCCCAGC...ATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAACAAGAGCACCTTGTCTaGCAGCTGGGACCATACCAG +
Preference number: 4 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKQEHLV*QLGPYQ
Trigger: CTGGTATGGTCCCAGCTGCCAGACAAGGTGCTCTTG...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CCA 90 bp CCCTTACCCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCCTGGAGGACAGTaGCCCTGTGCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: PLPISIHLSLYVVSLYASLPGGQ*PCACTC
Trigger: GCAGGTGCAGGCACAGGGCCACTGTCCTCCAGGCAG...GGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGGGTAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGGCAGTTAGATGGATGTaGATGAACACCTCCCTTACC +
Preference number: 4 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLAVRWM*MNTSLT
Trigger: GGTAAGGGAGGTGTTCATTCACATCCATCTAACTGC...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CAGTCTCTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCCACCATTCTGACAGCTaGAGGAGAAGCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QSLGLSGNECSPSVLLNSHHSDS*RRSCSS
Trigger: AGAACTGCAGCTTCTCCTGCAGCTGTCAGAATGGTG...GCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAGAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATCCCGGAAGCCAGCCTTaGAGGAGCAGCTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: PFPFIYLCTLSLFTPPCYPGSQP*RSSCHP
Trigger: GGGATGGCAGCTGCTCCTGCAAGGCTGGCTTCCGGG...ATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp TATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCTGTCCGGTGGCTGGGTaGCAGTGCCCATCATTGGCA +
Preference number: 4 (lower is better)
Translates to: YLCTLSLFTPPCYSWENLCPVAG*QCPSLA
Trigger: TGCCAATGATGGGCACTGCCACCCAGCCACCGGACA...GAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAAAAGTGTCCTTCTCAGTaGTCACCAAAGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKKCPSQ*SPKARV
Trigger: GACCCTGGCCTTTGGTGACCACTGAGAAGGACACTT...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR TCA 90 bp CCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATGTTACAGGTGGCTCCTaGGCGCCCTGGTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PFPFIYLCTLSLFTPPCYVTGGS*APWWAK
Trigger: CTTTGCCCACCAGGGCGCTCAGGAGCCACCTGTAAC...ATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCAATAGCACTGGGAACTaGGATGAGTCCCAACTTCTT +
Preference number: 4 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCNSTGN*DESQLL
Trigger: AAGAAGTTGGGACTCATCTCAGTTCCCAGTGCTATT...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCAAATGGCCGAGGCCTTaGAGGCCTAAGAATAACATG +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIKWPRP*RPKNNM
Trigger: CATGTTATTCTTAGGCCTTCAAGGCCTCGGCCATTT...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCATTTGGGAACTGTGGTaGCTGAATATCTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCIWELW*LNISEH
Trigger: GTGCTCTGAGATATTCAGTCACCACAGTTCCCAAAT...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTTCGCCCCGCAACTCTaGCTCTTCCTCATCGGCCCC +
Preference number: 4 (lower is better)
Translates to: PFPFIYLCTLSLFTPPCYFAPQL*LFLIGP
Trigger: GGGGCCGATGAGGAAGAGGCAGAGTTGCGGGGCGAA...ATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAACACCATTCTGACAGCTaGAGGAGAAGCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKHHSDS*RRSCSS
Trigger: AGAACTGCAGCTTCTCCTGCAGCTGTCAGAATGGTG...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR GCA 90 bp TATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCGGCAGAAGCTCGGCCTaGCTTATGGCTTCCGTAGCT +
Preference number: 4 (lower is better)
Translates to: YLCTLSLFTPPCYSWENLGRSSA*LMASVA
Trigger: AGCTACGGAAGCCATAAGGCAGGCCGAGCTTCTGCC...GAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATAACCCGGGCCGGCACTaGCAGCGATGCCGAGTGATT +
Preference number: 4 (lower is better)
Translates to: PFPFIYLCTLSLFTPPCYNPGRH*QRCRVI
Trigger: AATCACTCGGCATCGCTGCCAGTGCCGGCCCGGGTT...ATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATGCACTGGGAGGTCCCTaGGTGCACCGTTATGCTGGC +
Preference number: 4 (lower is better)
Translates to: PFPFIYLCTLSLFTPPCYALGGP*VHRYAG
Trigger: GCCAGCATAACGGTGCACCCAGGGACCTCCCAGTGC...ATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp CTCCTCCTCCTGCTGGTGAAATTGTCTGCCCTGGGGCCTCAGCTACCTTGGCTGGGCCTAAGAATAACATaGACTTTGCATGCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: LLLLLVKLSALGPQLPWLGLRIT*TLHAFD
Trigger: ATCAAAGGCATGCAAAGTCCATGTTATTCTTAGGCC...CAGCCAAGGTAGCTGAGGCCCCAGGGCAGACAATTTCACCAGCAGGAGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCAAGTCGTCGACATCGATaGAGGTCCTCTGATCTGTGT +
Preference number: 4 (lower is better)
Translates to: LFTPPCYSWENLLSCIHSSRRHR*RSSDLC
Trigger: ACACAGATCAGAGGACCTGCATCGATGTCGACGACT...TGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GCGTTTATTATGTGTGTTGAGAATGTTCAATATCCTCCTTCTTGCTGCTTGAAACATCGTGCGCGCCGGTaGCTCCTCCGCTCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: AFIMCVENVQYPPSCCLKHRARR*LLRSPA
Trigger: AGCCGGAGAGCGGAGGAGGCACCGGCGCGCACGATG...TTTCAAGCAGCAAGAAGGAGGATATTGAACATTCTCAACACACATAATAAACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GCGTTTATTATGTGTGTTGAGAATGTTCAATATCCTCCTTCTTGCTGCTTGAAACCGGGCGGACATCGTTaGTGGCAGCTGGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: AFIMCVENVQYPPSCCLKPGGHR*WQLGPW
Trigger: CCACGGCCCCAGCTGCCAGCAACGATGTCCGCCCGG...TTTCAAGCAGCAAGAAGGAGGATATTGAACATTCTCAACACACATAATAAACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CCCTTACCCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCGCTGGTGAAATTGTCTaGCCTGGGGCCTCAGCTACC +
Preference number: 4 (lower is better)
Translates to: PLPISIHLSLYVVSLYASAGEIV*PGASAT
Trigger: GGTAGCTGAGGCCCCAGGGCAGACAATTTCACCAGC...GGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGGGTAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GCGTTTATTATGTGTGTTGAGAATGTTCAATATCCTCCTTCTTGCTGCTTGAAAGGCCAGGGTCCCCTCTaGCTGGGACTGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: AFIMCVENVQYPPSCCLKGQGPL*LGLERR
Trigger: CCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCC...TTTCAAGCAGCAAGAAGGAGGATATTGAACATTCTCAACACACATAATAAACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GCGTTTATTATGTGTGTTGAGAATGTTCAATATCCTCCTTCTTGCTGCTTGAAAAGCCGCGGGGACATGTaGACAGGGGCCCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: AFIMCVENVQYPPSCCLKSRGDM*TGAQHW
Trigger: CCAGTGCTGGGCCCCTGTGCACATGTCCCCGCGGCT...TTTCAAGCAGCAAGAAGGAGGATATTGAACATTCTCAACACACATAATAAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCCTTCATTTCAAGGTATaGGTTTTCCACACTCCGTCT +
Preference number: 4 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLILHFKV*VFHTPS
Trigger: AGACGGAGTGTGGAAAACGCATACCTTGAAATGAAG...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp AACATCACAGTTTTCTGGCTCTCCGTGTTTCTCACGTATAGTCTGAGGTCAATTGTGGCTGGGTGGCAGTaGCCATCATTGGCACAAGAG +
Preference number: 4 (lower is better)
Translates to: NITVFWLSVFLTYSLRSIVAGWQ*PSLAQE
Trigger: CTCTTGTGCCAATGATGGGCACTGCCACCCAGCCAC...AATTGACCTCAGACTATACGTGAGAAACACGGAGAGCCAGAAAACTGTGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CAA 72 bp CTCCCTTACCCATTTCCATTCATCTATCTCTGTACGTaGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPYPFPFIYLCT*SLFTPPCYSWE
Trigger: CTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGGGTAAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp CTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGCTGTATCCACTCAGTAATGGTGATATTCTaGCTCTCTGAATTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: LFTPPCYSWENLLSCIHSVMVIF*LSEFLG
Trigger: GCCTAGGAATTCAGAGAGTCAGAATATCACCATTAC...TGAGTGGATACAGCTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAATCATCGGATACACAGTaGTGTTTTGATACATGGGAT +
Preference number: 4 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKSSDTQ*CFDTWD
Trigger: ATCCCATGTATCAAAACATCACTGTGTATCCGATGA...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp CTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGATTTCCTTCAAACTCTaGGGATGGAACATCACAGTT +
Preference number: 4 (lower is better)
Translates to: LYVVSLYASLLFLGESPEISFKL*GWNITV
Trigger: AACTGTGATGTTCCATCCTCAGAGTTTGAAGGAAAT...CTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp CCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATAGCTGCAGGAGAAGCTaGAGTTCTTCCCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: PFPFIYLCTLSLFTPPCYSCRRS*SSSQRC
Trigger: ACACCTTTGGGAAGAACTGCAGCTTCTCCTGCAGCT...ATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp AACATCACAGTTTTCTGGCTCTCCGTGTTTCTCACGTATAGTCTGAGGTCAATTGGCAGTGCCCATCATTaGCACAAGAGCACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: NITVFWLSVFLTYSLRSIGSAHH*HKSTLS
Trigger: AGACAAGGTGCTCTTGTGCCAATGATGGGCACTGCC...AATTGACCTCAGACTATACGTGAGAAACACGGAGAGCCAGAAAACTGTGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR TCA 90 bp TATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCTTAGATGGATGTGAATaGACACCTCCCTTACCCATT +
Preference number: 4 (lower is better)
Translates to: YLCTLSLFTPPCYSWENLLDGCE*TPPLPI
Trigger: AATGGGTAAGGGAGGTGTTCATTCACATCCATCTAA...GAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp AACATCACAGTTTTCTGGCTCTCCGTGTTTCTCACGTATAGTCTGAGGTCAATTCATCACAGGTCAAGCTaGAGTCATGGCCAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: NITVFWLSVFLTYSLRSIHHRSS*SHGQRS
Trigger: ACTCCTTTGGCCATGACTGCAGCTTGACCTGTGATG...AATTGACCTCAGACTATACGTGAGAAACACGGAGAGCCAGAAAACTGTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GCGTTTATTATGTGTGTTGAGAATGTTCAATATCCTCCTTCTTGCTGCTTGAAAAGCAGCCGCCGTTGTTaGCCTCACAGCTGTTCACGA +
Preference number: 4 (lower is better)
Translates to: AFIMCVENVQYPPSCCLKSSRRC*PHSCSR
Trigger: TCGTGAACAGCTGTGAGGCCAACAACGGCGGCTGCT...TTTCAAGCAGCAAGAAGGAGGATATTGAACATTCTCAACACACATAATAAACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GCGTTTATTATGTGTGTTGAGAATGTTCAATATCCTCCTTCTTGCTGCTTGAAACAGTACCAGGAGCTCTaGGCCCGTGAAGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: AFIMCVENVQYPPSCCLKQYQEL*AREVSF
Trigger: GAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTG...TTTCAAGCAGCAAGAAGGAGGATATTGAACATTCTCAACACACATAATAAACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp AACATCACAGTTTTCTGGCTCTCCGTGTTTCTCACGTATAGTCTGAGGTCAATTACCCCATCTGCTGGATaGTTCATTTCAAGGTATGCG +
Preference number: 4 (lower is better)
Translates to: NITVFWLSVFLTYSLRSITPSAG*FISRYA
Trigger: CGCATACCTTGAAATGAAGCATCCAGCAGATGGGGT...AATTGACCTCAGACTATACGTGAGAAACACGGAGAGCCAGAAAACTGTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR GCA 90 bp AACATCACAGTTTTCTGGCTCTCCGTGTTTCTCACGTATAGTCTGAGGTCAATTTCCACTCACCCCATCTaGTGGATGCTTCATTTCAAG +
Preference number: 4 (lower is better)
Translates to: NITVFWLSVFLTYSLRSISTHPI*WMLHFK
Trigger: CTTGAAATGAAGCATCCAGCAGATGGGGTGAGTGGA...AATTGACCTCAGACTATACGTGAGAAACACGGAGAGCCAGAAAACTGTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CCA 90 bp GCGTTTATTATGTGTGTTGAGAATGTTCAATATCCTCCTTCTTGCTGCTTGAAAGTCAAGCTGCAGTCATaGCCAAAGGAGTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: AFIMCVENVQYPPSCCLKVKLQS*PKESSR
Trigger: CCTGGATGACTCCTTTGGCCATGACTGCAGCTTGAC...TTTCAAGCAGCAAGAAGGAGGATATTGAACATTCTCAACACACATAATAAACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CAA 72 bp GGCCGAGGCCTTGAAGGCCTAAGAATAACATGGACTTaGCATGCCTTTGATAGTTTAGCTGGATGTAAAATT +
Preference number: 4 (lower is better)
Translates to: GRGLEGLRITWT*HAFDSLAGCKI
Trigger: AATTTTACATCCAGCTAAACTATCAAAGGCATGCAAAGTCCATGTTATTCTTAGGCCTTCAAGGCCTCGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
3UTR CAA 72 bp CATTCACCTTTAGATCTGAGAACGTCTTGGTCGTCGTaGCTTCATGTCAATGACTTCTTACTTTTGTATTTT +
Preference number: 4 (lower is better)
Translates to: HSPLDLRTSWSS*LHVNDFLLLYF
Trigger: AAAATACAAAAGTAAGAAGTCATTGACATGAAGCAACGACGACCAAGACGTTCTCAGATCTAAAGGTGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS GCA 90 bp CACAGGTGCCCGCGCCCGCTCCGCGGAGCCCAAGGTCGCTGCAGGTaGGGAGCGTCCCGGCTTCCCGCCCGCGCCCAAAGTGGCACCGCG +
Preference number: 5 (lower is better)
Translates to: HRCPRPLRGAQGRCR*GASRLPARAQSGTA
Trigger: CGCGGTGCCACTTTGGGCGCGGGCGGGAAGCCGGGACGCTCCGCACCTGCAGCGACCTTGGGCTCCGCGGAGCGGGCGCGGGCACCTGTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS GCA 90 bp CGCAGCCACAGGTGCCCGCGCCCGCTCCGCGGAGCCCAAGGTCGCTaGAGGTGCGGAGCGTCCCGGCTTCCCGCCCGCGCCCAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: RSHRCPRPLRGAQGR*RCGASRLPARAQSG
Trigger: GCCACTTTGGGCGCGGGCGGGAAGCCGGGACGCTCCGCACCTGCAGCGACCTTGGGCTCCGCGGAGCGGGCGCGGGCACCTGTGGCTGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS GCA 90 bp CCCGGAGCCTCCGCCTCCACGTGCGCCATAGGACGCAGCCACAGGTaGCCGCGCCCGCTCCGCGGAGCCCAAGGTCGCTGCAGGTGCGGA +
Preference number: 5 (lower is better)
Translates to: PGASASTCAIGRSHR*PRPLRGAQGRCRCG
Trigger: TCCGCACCTGCAGCGACCTTGGGCTCCGCGGAGCGGGCGCGGGCACCTGTGGCTGCGTCCTATGGCGCACGTGGAGGCGGAGGCTCCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp ATGGCAGGCGGCTCCGTAGCGCCCAGGGGGACAGGCCAGCTCGCAGTGCCGCCCCCCGGGCGGACATCGTaGCTGGCAGCTGGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: MAGGSVAPRGTGQLAVPPPGRTS*LAAGAV
Trigger: CACGGCCCCAGCTGCCAGCAACGATGTCCGCCCGGG...GGGCGGCACTGCGAGCTGGCCTGTCCCCCTGGGCGCTACGGAGCCGCCTGCCAT
76% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS TCA 90 bp GCGTCCCGGCTTCCCGCCCGCGCCCAAAGTGGCACCGCGGAGACCTaGTCGCCGGGTCCACCCTGCAGGAACTCGCCCCGGCGCGTTGAG +
Preference number: 5 (lower is better)
Translates to: ASRLPARAQSGTAET*SPGPPCRNSPRRVE
Trigger: CTCAACGCGCCGGGGCGAGTTCCTGCAGGGTGGACCCGGCGATCAGGTCTCCGCGGTGCCACTTTGGGCGCGGGCGGGAAGCCGGGACGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS GCA 90 bp CCCGTGTGCGGGTCACACAGGCCCCCGTTGAGGCAACCGCCGCTGTaGCGGCAGCCAGCTCTGACGTCCCGGGGGAGGCACTTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: PVCGSHRPPLRQPPL*RQPALTSRGRHFSA
Trigger: TGCCGAGAAGTGCCTCCCCCGGGACGTCAGAGCTGGCTGCCGGCACAGCGGCGGTTGCCTCAACGGGGGCCTGTGTGACCCGCACACGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294599.8
CDS CCA 90 bp CCGGTCACAGGGTCGCAGGCCGCCCCCTGCCCACACCCACACACGTaGGTGCAGTTGGGGCCGAAGCGGCCCTGCGGACAGGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: PVTGSQAAPCPHPHT*VQLGPKRPCGQVRL
Trigger: CAACCTCACCTGTCCGCAGGGCCGCTTCGGCCCCAACTGCACCCACGTGTGTGGGTGTGGGCAGGGGGCGGCCTGCGACCCTGTGACCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
ENST00000491842.1
CDS CCA 90 bp TCGCTGCAGGTGCGGAGCGTCCCGGCTTCCCGCCCGCGCCCAAAGTaGCACCGCGGAGACCTGATCGCCGGGTCCACCCTGCAGGAACTC +
Preference number: 5 (lower is better)
Translates to: SLQVRSVPASRPRPK*HRGDLIAGSTLQEL
Trigger: GAGTTCCTGCAGGGTGGACCCGGCGATCAGGTCTCCGCGGTGCCACTTTGGGCGCGGGCGGGAAGCCGGGACGCTCCGCACCTGCAGCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS GCA 90 bp CACCCACAGCCGGCCTTCCACACCGGCACCGTGTGGCTTAAGGCCTaGACGCACGGCTGGCGGCGGCCCACCAGGGTCAGCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: HPQPAFHTGTVWLKA*THGWRRPTRVSSCS
Trigger: TGAGCAGGAGCTGACCCTGGTGGGCCGCCGCCAGCCGTGCGTGCAGGCCTTAAGCCACACGGTGCCGGTGTGGAAGGCCGGCTGTGGGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS GCA 90 bp CTGGCGCTGCATTCAGCCGAGAGGCAGCCCTCCTCGTCGGGCTGCTaGATCCACCCTCGGCAGCACCTGAGCACGGTCCGGGCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: LALHSAERQPSSSGC*IHPRQHLSTVRASV
Trigger: CACGGAGGCCCGGACCGTGCTCAGGTGCTGCCGAGGGTGGATGCAGCAGCCCGACGAGGAGGGCTGCCTCTCGGCTGAATGCAGCGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS GCA 90 bp AGGCTGGCGCTGCATTCAGCCGAGAGGCAGCCCTCCTCGTCGGGCTaGTGCATCCACCCTCGGCAGCACCTGAGCACGGTCCGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RLALHSAERQPSSSG*CIHPRQHLSTVRAS
Trigger: GGAGGCCCGGACCGTGCTCAGGTGCTGCCGAGGGTGGATGCAGCAGCCCGACGAGGAGGGCTGCCTCTCGGCTGAATGCAGCGCCAGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS GCA 90 bp CCCGTGTGCGGGTCACACAGGCCCCCGTTGAGGCAACCGCCGCTGTaGCGGCAGCCAGCTCTGACGTCCCGGGGGAGGCACTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: PVCGSHRPPLRQPPL*RQPALTSRGRHSFS
Trigger: TGAGAAGGAGTGCCTCCCCCGGGACGTCAGAGCTGGCTGCCGGCACAGCGGCGGTTGCCTCAACGGGGGCCTGTGTGACCCGCACACGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS-3UTR CAA 90 bp GGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCCACACGTGGGTGCAGTaGGGGCCGAAGCGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GVAQAPISAGAGVLAAHAHTWVQ*GPKRPC
Trigger: GCAGGGCCGCTTCGGCCCCAACTGCACCCACGTGTG...GGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTCCCGGGCGGACATCGTaGCTGGCAGCTGGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTPGRTS*LAAGAV
Trigger: CACGGCCCCAGCTGCCAGCAACGATGTCCGCCCGGG...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS TCA 90 bp GGGCAGGTGCAGGCCCCGCTGACGTGGTCACAGGCTGCTCCATGCTaGCACTGGCACCGCTGCTCACAGCCGGGCCCAAAGTGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: GQVQAPLTWSQAAPC*HWHRCSQPGPKWPW
Trigger: CCAGGGCCACTTTGGGCCCGGCTGTGAGCAGCGGTGCCAGTGTCAGCATGGAGCAGCCTGTGACCACGTCAGCGGGGCCTGCACCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 90 bp GTGGCAGGGTGGCAGGCCGGGTTCTCACCGGGACACTGGCACATCTaGGCACAGTCCTCCCCAAAGCTGCCGGGTGGGCAGGCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: VAGWQAGFSPGHWHI*AQSSPKLPGGQACS
Trigger: CGAGCAGGCCTGCCCACCCGGCAGCTTTGGGGAGGACTGTGCGCAGATGTGCCAGTGTCCCGGTGAGAACCCGGCCTGCCACCCTGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS GCA 90 bp GCACACTCACCCACATCCGAGAGGCAGCCCTCCTCGTCGGGCTGCTaGATCCACCCTCGGCAGCACCTGAGCACGGTCCGGGCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: AHSPTSERQPSSSGC*IHPRQHLSTVRASV
Trigger: CACGGAGGCCCGGACCGTGCTCAGGTGCTGCCGAGGGTGGATGCAGCAGCCCGACGAGGAGGGCTGCCTCTCGGATGTGGGTGAGTGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS CCA 90 bp CCGCTTCCCACACTCGCCGCTCACGGAGTCACAGGCCACGCCCACTaGGCAGGTGCATGCCTGCCAGCACCCCGGCCCAAAGTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: PLPTLAAHGVTGHAH*AGACLPAPRPKVAQ
Trigger: CTGGGCTACTTTGGGCCGGGGTGCTGGCAGGCATGCACCTGCCCAGTGGGCGTGGCCTGTGACTCCGTGAGCGGCGAGTGTGGGAAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 90 bp TCAGGGTCGCAGCGGGCAGCGTGCTGGCATGCTGGGCAGATCTCCTaGCAGCCCAGCCCCCAGCGGCCCTCGGGACAATCTGCCTCACAG +
Preference number: 5 (lower is better)
Translates to: SGSQRAACWHAGQIS*QPSPQRPSGQSASQ
Trigger: CTGTGAGGCAGATTGTCCCGAGGGCCGCTGGGGGCTGGGCTGCCAGGAGATCTGCCCAGCATGCCAGCACGCTGCCCGCTGCGACCCTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 90 bp CAGGTCCCGGTGGCAGGGTGGCAGGCCGGGTTCTCACCGGGACACTaGCACATCTGCGCACAGTCCTCCCCAAAGCTGCCGGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: QVPVAGWQAGFSPGH*HICAQSSPKLPGGQ
Trigger: CTGCCCACCCGGCAGCTTTGGGGAGGACTGTGCGCAGATGTGCCAGTGTCCCGGTGAGAACCCGGCCTGCCACCCTGCCACCGGGACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS-3UTR CAA 90 bp ATGGCAGGCGGCTCCGTAGCGCCCAGGGGGACAGGCCAGCTCGCAGTGCCGCCCGTCATCCTGGAAGAGTaGCGGCAGCTCGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: MAGGSVAPRGTGQLAVPPVILEE*RQLVLE
Trigger: CTCCAGGACGAGCTGCCGCAACTCTTCCAGGATGAC...GGGCGGCACTGCGAGCTGGCCTGTCCCCCTGGGCGCTACGGAGCCGCCTGCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp GGCCAGCTCGCAGTGCCGCCCCGTCCAGCCCAGGCCACAGGAGCAGCTGCCGTTTGCGGACAGGTGAGGTaGCAGTCCGTCCCGAGGAAC +
Preference number: 5 (lower is better)
Translates to: GQLAVPPRPAQATGAAAVCGQVR*QSVPRN
Trigger: GTTCCTCGGGACGGACTGCAACCTCACCTGTCCGCA...AACGGCAGCTGCTCCTGTGGCCTGGGCTGGACGGGGCGGCACTGCGAGCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp CAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCCTCGCTCACAGCAGGAGCAGCTGCCGTaGCTGGCGTGGCACAGGCCC +
Preference number: 5 (lower is better)
Translates to: QVCSQPTPNRFWGQPRSQQEQLP*LAWHRP
Trigger: GGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTG...CTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS TCA 90 bp CGCACCGCGGGCCCACGTAGCCAGCCTCACACAGACACAGGCCGCTaGTGGCATCACAGCTCCCGTGGCCAGCGCTGCAGTTGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: RTAGPRSQPHTDTGR*WHHSSRGQRCSCRG
Trigger: ACCCCTGCAACTGCAGCGCTGGCCACGGGAGCTGTGATGCCATCAGCGGCCTGTGTCTGTGTGAGGCTGGCTACGTGGGCCCGCGGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS TCA 90 bp GGCAGCCCTCCTCGTCGGGCTGCTGCATCCACCCTCGGCAGCACCTaGGCACGGTCCGGGCCTCCGTGGTATACACCTGCCTGTAGCCCA +
Preference number: 5 (lower is better)
Translates to: GSPPRRAAASTLGST*ARSGPPWYTPACSP
Trigger: TGGGCTACAGGCAGGTGTATACCACGGAGGCCCGGACCGTGCTCAGGTGCTGCCGAGGGTGGATGCAGCAGCCCGACGAGGAGGGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS TCA 90 bp CCAAGGAGCCTGGGCCTAGGGGCCCGCGGCAGAGCCCAGGTGGAGTaGAGCCTTCTGCCTGGGTGTGTGCGGGAGCTAAGACCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: PRSLGLGARGRAQVE*SLLPGCVRELRPWA
Trigger: GGCCCAAGGTCTTAGCTCCCGCACACACCCAGGCAGAAGGCTTCACTCCACCTGGGCTCTGCCGCGGGCCCCTAGGCCCAGGCTCCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494257.1
CDS GCA 90 bp GCCTCTACTAGTGCCTCGCTGGTCCACCGCTCCGGGATGTGGGTCTaGTGGAGGCGGGCAGTGTGCCCGCTGAGCCCTGGGCTAAGGACG +
Preference number: 5 (lower is better)
Translates to: ASTSASLVHRSGMWV*WRRAVCPLSPGLRT
Trigger: CGTCCTTAGCCCAGGGCTCAGCGGGCACACTGCCCGCCTCCAGCAGACCCACATCCCGGAGCGGTGGACCAGCGAGGCACTAGTAGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000494257.1
CDS CCA 90 bp CTGCCATCCCTCTTGTCACAGGACTGCGTGTGGGGCTGCACACACTaGCACTCCTCCGAGCAGCCCGGCCCAAAGGCCCACGGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: LPSLLSQDCVWGCTH*HSSEQPGPKAHGGQ
Trigger: CTGCCCGCCGTGGGCCTTTGGGCCGGGCTGCTCGGAGGAGTGCCAGTGTGTGCAGCCCCACACGCAGTCCTGTGACAAGAGGGATGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 90 bp GGCAGCTGGGGCCGTGGTAGCCAGCAGCACATGAGCAGGTCCCGGTaGCAGGGTGGCAGGCCGGGTTCTCACCGGGACACTGGCACATCT +
Preference number: 5 (lower is better)
Translates to: GSWGRGSQQHMSRSR*QGGRPGSHRDTGTS
Trigger: AGATGTGCCAGTGTCCCGGTGAGAACCCGGCCTGCCACCCTGCCACCGGGACCTGCTCATGTGCTGCTGGCTACCACGGCCCCAGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS-3UTR CAA 90 bp GCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACGGGACTGCCTCTTACCCGCCAGGGTTGTaGGTGCACACCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: ARVPSGWDWRGGLHGTASYPPGL*VHTCWQ
Trigger: CTGCCAGCAGGTGTGCACCAACAACCCTGGCGGGTA...AGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACCCCACCGGGCACTCTaGGCCACAGTCCTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPPHRAL*ATVLSL
Trigger: CAGGGAGAGGACTGTGGCCAAGAGTGCCCGGTGGGG...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp GCCTCAGCCCATGAGTGCCAGGTGCTCGGGAGGGCTGGTCTGTCCTCACCCAGGCCCCACCGGGCACTCTaGGCCACAGTCCTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: ASAHECQVLGRAGLSSPRPHRAL*ATVLSL
Trigger: CAGGGAGAGGACTGTGGCCAAGAGTGCCCGGTGGGG...CCTGGGTGAGGACAGACCAGCCCTCCCGAGCACCTGGCACTCATGGGCTGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCAGCTCCGGCGGTGCAGTaGCAGGCACTGCGACAGTCC +
Preference number: 5 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPAPAVQ*QALRQS
Trigger: GGACTGTCGCAGTGCCTGCAACTGCACCGCCGGAGC...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGGCTCCGGCGGTGCAGTaGCAGGCACTGCGACAGTCC +
Preference number: 5 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGAPAVQ*QALRQS
Trigger: GGACTGTCGCAGTGCCTGCAACTGCACCGCCGGAGC...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGTCACACAGGCCCCCGTaGAGGCAACCGCCGCTGTGC +
Preference number: 5 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGSHRPP*RQPPLC
Trigger: GCACAGCGGCGGTTGCCTCAACGGGGGCCTGTGTGA...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS GCA 90 bp CTGCCGTCCTCCTGGAGCTGGAACCCGGGCCGGCACTGGCAGCGATaGCGAGTGATTGTGAGCTGGACACAGTGGTGCTGGCAGCCGCCA +
Preference number: 5 (lower is better)
Translates to: LPSSWSWNPGRHWQR*RVIVSWTQWCWQPP
Trigger: TGGCGGCTGCCAGCACCACTGTGTCCAGCTCACAATCACTCGGCATCGCTGCCAGTGCCGGCCCGGGTTCCAGCTCCAGGAGGACGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 90 bp CACACTCGCCGCTCACGGAGTCACAGGCCACGCCCACTGGGCAGGTaGATGCCTGCCAGCACCCCGGCCCAAAGTAGCCCAGCTCACACT +
Preference number: 5 (lower is better)
Translates to: HTRRSRSHRPRPLGR*MPASTPAQSSPAHT
Trigger: AGTGTGAGCTGGGCTACTTTGGGCCGGGGTGCTGGCAGGCATGCACCTGCCCAGTGGGCGTGGCCTGTGACTCCGTGAGCGGCGAGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 90 bp TGGAACCCGGGCCGGCACTGGCAGCGATGCCGAGTGATTGTGAGCTaGACACAGTGGTGCTGGCAGCCGCCATTGCCCAGGGCGCAGGAG +
Preference number: 5 (lower is better)
Translates to: WNPGRHWQRCRVIVS*TQWCWQPPLPRAQE
Trigger: CTCCTGCGCCCTGGGCAATGGCGGCTGCCAGCACCACTGTGTCCAGCTCACAATCACTCGGCATCGCTGCCAGTGCCGGCCCGGGTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 90 bp TCTACTAGTGCCTCGCTGGTCCACCGCTCCGGGATGTGGGTCTGCTaGAGGCGGGCAGTGTGCCCGCTGAGCCCTGGGCTAAGGACGGGT +
Preference number: 5 (lower is better)
Translates to: STSASLVHRSGMWVC*RRAVCPLSPGLRTG
Trigger: ACCCGTCCTTAGCCCAGGGCTCAGCGGGCACACTGCCCGCCTCCAGCAGACCCACATCCCGGAGCGGTGGACCAGCGAGGCACTAGTAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000494257.1
CDS CCA 90 bp ACTGGAGAGGCGGGCTCCACGGGACTGCCTCTACTAGTGCCTCGCTaGTCCACCGCTCCGGGATGTGGGTCTGCTGGAGGCGGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: TGEAGSTGLPLLVPR*STAPGCGSAGGGQC
Trigger: ACACTGCCCGCCTCCAGCAGACCCACATCCCGGAGCGGTGGACCAGCGAGGCACTAGTAGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000494257.1
CDS-3UTR CAA 90 bp GCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCAAGGAGCCGGCCAGGTaGGTGCAGTGGTGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: APTPVLSPTQSRGESGTSKEPAR*VQWCSQ
Trigger: CTGCGAGCACCACTGCACCAACCTGGCCGGCTCCTT...GGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp GGGAGGTCCCTGGGTGCACCGTTATGCTGGCCGGGCCCCAGGGAGGAGCCCACACAGCTGCCATCCCTCTaGTCACAGGACTGCGTGTGG +
Preference number: 5 (lower is better)
Translates to: GRSLGAPLCWPGPREEPTQLPSL*SQDCVW
Trigger: CCACACGCAGTCCTGTGACAAGAGGGATGGCAGCTG...TGTGGGCTCCTCCCTGGGGCCCGGCCAGCATAACGGTGCACCCAGGGACCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCCCCCGGAAGCCAGCCTaGCAGGAGCAGCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: HTSLQERQVAGLSTALHGPRKPA*QEQLPS
Trigger: GGATGGCAGCTGCTCCTGCAAGGCTGGCTTCCGGGG...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp TCACAGAAGTGGCCGTGGAAGCCGGCAGGGCAGAGGCATCGGCCACTGATGGGGGCTCCGGCGGTGCAGTaGCAGGCACTGCGACAGTCC +
Preference number: 5 (lower is better)
Translates to: SQKWPWKPAGQRHRPLMGAPAVQ*QALRQS
Trigger: GGACTGTCGCAGTGCCTGCAACTGCACCGCCGGAGC...CCCCATCAGTGGCCGATGCCTCTGCCCTGCCGGCTTCCACGGCCACTTCTGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCACAGGAGCAGCTGCCGTaGCTGGCGTGGCACAGGCCC +
Preference number: 5 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSQEQLP*LAWHRP
Trigger: GGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTG...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp CCCGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCCCGCACAGCCCCCGTaGGCGTTGGCACACTCACCC +
Preference number: 5 (lower is better)
Translates to: PAVTVQGAAGPKLAPSAIPAQPP*ALAHSP
Trigger: GGGTGAGTGTGCCAACGCCAACGGGGGCTGTGCGGG...GATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS GCA 90 bp CAGGAGCAGCTGCCATCCCTCTTGTCACAGGACTGCGTGTGGGGCTaGACACACTGGCACTCCTCCGAGCAGCCCGGCCCAAAGGCCCAC +
Preference number: 5 (lower is better)
Translates to: QEQLPSLLSQDCVWG*THWHSSEQPGPKAH
Trigger: GTGGGCCTTTGGGCCGGGCTGCTCGGAGGAGTGCCAGTGTGTGCAGCCCCACACGCAGTCCTGTGACAAGAGGGATGGCAGCTGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 90 bp TCATCCTGGAAGAGTTGCGGCAGCTCGTCCTGGAGCACGGCAATGTaGGGCAGGGGCCGCACGAAAGGCAGCTCGCCGTCCAGGTCCACC +
Preference number: 5 (lower is better)
Translates to: SSWKSCGSSSWSTAM*GRGRTKGSSPSRST
Trigger: GGTGGACCTGGACGGCGAGCTGCCTTTCGTGCGGCCCCTGCCCCACATTGCCGTGCTCCAGGACGAGCTGCCGCAACTCTTCCAGGATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS-3UTR CAA 90 bp CGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTTCCTTGCTGGCAGCCGCCATaGCCCAGGGCGCAGGAGTTA +
Preference number: 5 (lower is better)
Translates to: RPHLSSVQLRAAGRAGLPCWQPP*PRAQEL
Trigger: TAACTCCTGCGCCCTGGGCAATGGCGGCTGCCAGCA...AGGAAGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp CTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGACTCAGCTGCCGTTCCTGTaGGCACACGGGCTTCTACGG +
Preference number: 5 (lower is better)
Translates to: LAPTPVLSPTQSRGESGTQLPFL*AHGLLR
Trigger: CCGTAGAAGCCCGTGTGCCAACAGGAACGGCAGCTG...AGTCCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp CGTGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGGCTCCGTAGCGCCCAAGGAGCCGGCCAGGTaGGTGCAGTGGTGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: RAVVVAGALQMAGGSVAPKEPAR*VQWCSQ
Trigger: CTGCGAGCACCACTGCACCAACCTGGCCGGCTCCTT...GGGCGCTACGGAGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp AGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTCCCCACCGGGCACTCTaGGCCACAGTCCTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: SSCRCWRGTGPHFCRSRCPHRAL*ATVLSL
Trigger: CAGGGAGAGGACTGTGGCCAAGAGTGCCCGGTGGGG...ACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp CCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCTCACACAGGCCCCCGTaGAGGCAACCGCCGCTGTGC +
Preference number: 5 (lower is better)
Translates to: PQGHTSLQERQVAGLSTASHRPP*RQPPLC
Trigger: GCACAGCGGCGGTTGCCTCAACGGGGGCCTGTGTGA...GGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp CCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGTCACACAGGCCCCCGTaGAGGCAACCGCCGCTGTGC +
Preference number: 5 (lower is better)
Translates to: PPFLQEQVCSQPTPNRFWSHRPP*RQPPLC
Trigger: GCACAGCGGCGGTTGCCTCAACGGGGGCCTGTGTGA...CCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp ACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGGGGAGAGCGGGTGCGGACAGGTGAGGTaGCAGTCCGTCCCGAGGAAC +
Preference number: 5 (lower is better)
Translates to: TLAPTPVLSPTQSRGESGCGQVR*QSVPRN
Trigger: GTTCCTCGGGACGGACTGCAACCTCACCTGTCCGCA...CCCGCTCTCCCCGCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp GCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCACACAGTGACACTGCCCCAGGAATGCCGACAGTaGTCGCCGTACAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: ARFPARGPHVAIHTVTLPQECRQ*SPYRPA
Trigger: TGCCGGCCTGTACGGCGACAACTGTCGGCATTCCTG...GGGCAGTGTCACTGTGTGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS GCA 90 bp AAGCCAGCCTTGCAGGAGCAGCTGCCATCCCTCTTGTCACAGGACTaGGTGTGGGGCTGCACACACTGGCACTCCTCCGAGCAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: KPALQEQLPSLLSQD*VWGCTHWHSSEQPG
Trigger: GCCGGGCTGCTCGGAGGAGTGCCAGTGTGTGCAGCCCCACACGCAGTCCTGTGACAAGAGGGATGGCAGCTGCTCCTGCAAGGCTGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 90 bp CTGCCTGACAGCGCTCGCCCCGGAAGCCAGCCTTGCAGGAGCAGCTaGCATCCCTCTTGTCACAGGACTGCGTGTGGGGCTGCACACACT +
Preference number: 5 (lower is better)
Translates to: LPDSARPGSQPCRSS*HPSCHRTACGAAHT
Trigger: AGTGTGTGCAGCCCCACACGCAGTCCTGTGACAAGAGGGATGGCAGCTGCTCCTGCAAGGCTGGCTTCCGGGGCGAGCGCTGTCAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 90 bp CCAGCTCACACTCTGCCTGACAGCGCTCGCCCCGGAAGCCAGCCTTaGAGGAGCAGCTGCCATCCCTCTTGTCACAGGACTGCGTGTGGG +
Preference number: 5 (lower is better)
Translates to: PAHTLPDSARPGSQP*RSSCHPSCHRTACG
Trigger: CCCACACGCAGTCCTGTGACAAGAGGGATGGCAGCTGCTCCTGCAAGGCTGGCTTCCGGGGCGAGCGCTGTCAGGCAGAGTGTGAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 90 bp GGCAGGAGCCATTCACGGCATCACAGGCAGCTCCGGCGGTGCAGTTaGAGGCACTGCGACAGTCCAATCCAAAGAAGCCGGCCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GRSHSRHHRQLRRCS*RHCDSPIQRSRPGR
Trigger: CCTGCCCGGCCGGCTTCTTTGGATTGGACTGTCGCAGTGCCTGCAACTGCACCGCCGGAGCTGCCTGTGATGCCGTGAATGGCTCCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 90 bp AAAGCCCAGGCCCCAGGCACACGTCCAGAGTCACCACCGAGTTCCTaGCCCGCCCCAGGAGGGCAAACAGGAGCCAGTGTTCAGGGATGC +
Preference number: 5 (lower is better)
Translates to: KAQAPGTRPESPPSS*PAPGGQTGASVQGC
Trigger: GCATCCCTGAACACTGGCTCCTGTTTGCCCTCCTGGGGCGGGGCAGGAACTCGGTGGTGACTCTGGACGTGTGCCTGGGGCCTGGGCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494257.1
CDS CCA 90 bp CCTTCTCAGTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTaGAGAGGCGGGCTCCACGGGACTGCCTCTACTAGTGCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: PSQWSPKARVPSGWD*RGGLHGTASTSASL
Trigger: CAGCGAGGCACTAGTAGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCACTGAGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000494257.1
CDS-3UTR CAA 90 bp CACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCAAACCGGAAGGACCCCTGGGTGTaGAGGCAGCCATGGGCACAC +
Preference number: 5 (lower is better)
Translates to: HRPPFLQEQVCSQPTPNRKDPWV*RQPWAH
Trigger: GTGTGCCCATGGCTGCCTCAACACCCAGGGGTCCTT...CCGGTTTGGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp GCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGAGCAGCCGCCGTTGTaGGCCTCACAGCTGTTCACG +
Preference number: 5 (lower is better)
Translates to: AVAGVAQAPISAGAGVLAEQPPL*ASQLFT
Trigger: CGTGAACAGCTGTGAGGCCAACAACGGCGGCTGCTC...TGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp GCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCATACCCGCCAGGGTTGTaGGTGCACACCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: AVAGVAQAPISAGAGVLAYPPGL*VHTCWQ
Trigger: CTGCCAGCAGGTGTGCACCAACAACCCTGGCGGGTA...TGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp CAGGAGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGTCGTACCCGCCAGGGTaGTTGGTGCACACCTGCTGG +
Preference number: 5 (lower is better)
Translates to: QEQLPLLAWHRPPFLQEQSYPPG*LVHTCW
Trigger: CCAGCAGGTGTGCACCAACAACCCTGGCGGGTACGA...CTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp GCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAGAGCCGCGTCATCCTGGAAGAGTaGCGGCAGCTCGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: APAPTLAPTPVLSPTQSRVILEE*RQLVLE
Trigger: CTCCAGGACGAGCTGCCGCAACTCTTCCAGGATGAC...GCGGCTCTGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp CAGGTGTGCTCGCAGCCCACGCCAAACCGGTTCTGGGGGCAGCCTCGCTCACAGTGGCACCGGCCCCGGTaGGCACAGTTGCATTTCTTG +
Preference number: 5 (lower is better)
Translates to: QVCSQPTPNRFWGQPRSQWHRPR*AQLHFL
Trigger: CAAGAAATGCAACTGTGCCAACCGGGGCCGGTGCCA...CTGTGAGCGAGGCTGCCCCCAGAACCGGTTTGGCGTGGGCTGCGAGCACACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp CAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGCCCCGGAAGCCAGCCTaGCAGGAGCAGCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: QSQCRVQLGPNWPLLQSRPRKPA*QEQLPS
Trigger: GGATGGCAGCTGCTCCTGCAAGGCTGGCTTCCGGGG...CCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp GTGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCATCACAGGAGCCCCCGTaGAGACACCCACACAGCTGT +
Preference number: 5 (lower is better)
Translates to: VVTKGQGPLWLGLERRAPSQEPP*RHPHSC
Trigger: ACAGCTGTGTGGGTGTCTCAACGGGGGCTCCTGTGA...TGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTGGAGAGGCGGGCTCCACCAGGCCACGAGGAGGTaGCCTGCTCCTTTACCTTCC +
Preference number: 5 (lower is better)
Translates to: WSPKARVPSGWDWRGGLHQATRR*PAPLPS
Trigger: GGAAGGTAAAGGAGCAGGCAACCTCCTCGTGGCCTG...GTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS GCA 90 bp CGGCACTGGCAGCGATGCCGAGTGATTGTGAGCTGGACACAGTGGTaGTGGCAGCCGCCATTGCCCAGGGCGCAGGAGTTAATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RHWQRCRVIVSWTQW*WQPPLPRAQELMAR
Trigger: CCTGGCCATTAACTCCTGCGCCCTGGGCAATGGCGGCTGCCAGCACCACTGTGTCCAGCTCACAATCACTCGGCATCGCTGCCAGTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 90 bp CATTCACGGCATCACAGGCAGCTCCGGCGGTGCAGTTGCAGGCACTaGGACAGTCCAATCCAAAGAAGCCGGCCGGGCAGGCATGCTCGC +
Preference number: 5 (lower is better)
Translates to: HSRHHRQLRRCSCRH*DSPIQRSRPGRHAR
Trigger: GCGAGCATGCCTGCCCGGCCGGCTTCTTTGGATTGGACTGTCGCAGTGCCTGCAACTGCACCGCCGGAGCTGCCTGTGATGCCGTGAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 90 bp GGCAGAGGCAGGAGCCATTCACGGCATCACAGGCAGCTCCGGCGGTaGAGTTGCAGGCACTGCGACAGTCCAATCCAAAGAAGCCGGCCG +
Preference number: 5 (lower is better)
Translates to: GRGRSHSRHHRQLRR*SCRHCDSPIQRSRP
Trigger: CGGCCGGCTTCTTTGGATTGGACTGTCGCAGTGCCTGCAACTGCACCGCCGGAGCTGCCTGTGATGCCGTGAATGGCTCCTGCCTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 90 bp ACACAATGCCTGCCGTCCTCCTGGAGCTGGAACCCGGGCCGGCACTaGCAGCGATGCCGAGTGATTGTGAGCTGGACACAGTGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: TQCLPSSWSWNPGRH*QRCRVIVSWTQWCW
Trigger: CCAGCACCACTGTGTCCAGCTCACAATCACTCGGCATCGCTGCCAGTGCCGGCCCGGGTTCCAGCTCCAGGAGGACGGCAGGCATTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 90 bp CTGTTGGCACACGGGCTTCTACGGACACAATGCCTGCCGTCCTCCTaGAGCTGGAACCCGGGCCGGCACTGGCAGCGATGCCGAGTGATT +
Preference number: 5 (lower is better)
Translates to: LLAHGLLRTQCLPSS*SWNPGRHWQRCRVI
Trigger: AATCACTCGGCATCGCTGCCAGTGCCGGCCCGGGTTCCAGCTCCAGGAGGACGGCAGGCATTGTGTCCGTAGAAGCCCGTGTGCCAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 90 bp GGTGGCAGTGCCCATCATTGGCACAAGAGCACCTTGTCTGGCAGCTaGGACCATACCAGCCTGCTGGGCACACGTCCTGGCAGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: GGSAHHWHKSTLSGS*DHTSLLGTRPGSGC
Trigger: GCAGCCGCTGCCAGGACGTGTGCCCAGCAGGCTGGTATGGTCCCAGCTGCCAGACAAGGTGCTCTTGTGCCAATGATGGGCACTGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS-3UTR CAA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCAAAGGACCCCTGGGTGTaGAGGCAGCCATGGGCACAC +
Preference number: 5 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSKDPWV*RQPWAH
Trigger: GTGTGCCCATGGCTGCCTCAACACCCAGGGGTCCTT...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp TGGAGGCGGGCAGTGTGCCCGCTTCCCGGCACGTGGGCCCCATGTAGCCATCCAGGAGGACAAGTCTCATaGCAGATGAGCCCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: WRRAVCPLPGTWAPCSHPGGQVS*QMSPVQ
Trigger: CTGGACTGGGCTCATCTGCAATGAGACTTGTCCTCC...TGGATGGCTACATGGGGCCCACGTGCCGGGAAGCGGGCACACTGCCCGCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTTCCAAGAGCGACAGGTaGCTGGGCTGTCCACAGCCC +
Preference number: 5 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSSKSDR*LGCPQP
Trigger: GGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGA...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp TGCACCTGCGCCTGCACCCACACTGGCGCCCACACCTGTCCTCAGTCCAACTCACAGGAATGCCGACAGTaGTCGCCGTACAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: CTCACTHTGAHTCPQSNSQECRQ*SPYRPA
Trigger: TGCCGGCCTGTACGGCGACAACTGTCGGCATTCCTG...TGAGTTGGACTGAGGACAGGTGTGGGCGCCAGTGTGGGTGCAGGCGCAGGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTGCAGGGGGCTCCATGTaGACACCAGCACAACCCCTG +
Preference number: 5 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSAGGSM*TPAQPL
Trigger: CAGGGGTTGTGCTGGTGTCAACATGGAGCCCCCTGC...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp AGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCAGGGGGCTCCATGTaGACACCAGCACAACCCCTG +
Preference number: 5 (lower is better)
Translates to: SSCRCWRGTGPHFCRSRCAGGSM*TPAQPL
Trigger: CAGGGGTTGTGCTGGTGTCAACATGGAGCCCCCTGC...ACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp GGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTGCTCGCAGCCCACGCCGCATTCGTCCACATCTaGGCAAGTCTCGCCATCACC +
Preference number: 5 (lower is better)
Translates to: GVAQAPISAGAGVLAAHAAFVHI*ASLAIT
Trigger: GGTGATGGCGAGACTTGCCAAGATGTGGACGAATGC...GGCGTGGGCTGCGAGCACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS CCA 90 bp GTGGCTGGGTGGCAGTGCCCATCATTGGCACAAGAGCACCTTGTCTaGCAGCTGGGACCATACCAGCCTGCTGGGCACACGTCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: VAGWQCPSLAQEHLV*QLGPYQPAGHTSWQ
Trigger: CTGCCAGGACGTGTGCCCAGCAGGCTGGTATGGTCCCAGCTGCCAGACAAGGTGCTCTTGTGCCAATGATGGGCACTGCCACCCAGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 90 bp GGGCACAGCTGCAGTGTCCGGTGGCTGGGTGGCAGTGCCCATCATTaGCACAAGAGCACCTTGTCTGGCAGCTGGGACCATACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: GHSCSVRWLGGSAHH*HKSTLSGSWDHTSL
Trigger: CAGGCTGGTATGGTCCCAGCTGCCAGACAAGGTGCTCTTGTGCCAATGATGGGCACTGCCACCCAGCCACCGGACACTGCAGCTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS-3UTR CAA 90 bp GTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTTGCTGGCAGCCGCCATaGCCCAGGGCGCAGGAGTTA +
Preference number: 5 (lower is better)
Translates to: VTVQGAAGPKLAPSAIQVCWQPP*PRAQEL
Trigger: TAACTCCTGCGCCCTGGGCAATGGCGGCTGCCAGCA...AACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTTCGTACCCGCCAGGGTaGTTGGTGCACACCTGCTGG +
Preference number: 5 (lower is better)
Translates to: ASLLKATPASKSDRLLGCSYPPG*LVHTCW
Trigger: CCAGCAGGTGTGCACCAACAACCCTGGCGGGTACGA...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCGGAGGACAAGTCTCATaGCAGATGAGCCCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSGGQVS*QMSPVQ
Trigger: CTGGACTGGGCTCATCTGCAATGAGACTTGTCCTCC...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp CACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCACAGCCCTCCACGGCTGGCACAAGAGCACCTaGTCTGGCAGCTGGGACCAT +
Preference number: 5 (lower is better)
Translates to: HTSLQERQVAGLSTALHGWHKST*SGSWDH
Trigger: ATGGTCCCAGCTGCCAGACAAGGTGCTCTTGTGCCA...GCCGTGGAGGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp AGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGGTGTTCACAGGAGCCCCCGTaGAGACACCCACACAGCTGT +
Preference number: 5 (lower is better)
Translates to: SSCRCWRGTGPHFCRSRCSQEPP*RHPHSC
Trigger: ACAGCTGTGTGGGTGTCTCAACGGGGGCTCCTGTGA...ACACCTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp AGCCCACACAGAGTCCACGTAACACAGCAAACACACAGGCCACGAGGAGGTTGCCACACGTGGGTGCAGTaGGGGCCGAAGCGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SPHRVHVTQQTHRPRGGCHTWVQ*GPKRPC
Trigger: GCAGGGCCGCTTCGGCCCCAACTGCACCCACGTGTG...GCAACCTCCTCGTGGCCTGTGTGTTTGCTGTGTTACGTGGACTCTGTGTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp GGCGCCTCTCTTCCAGCGGCCATGCGAGGCTTCCCTCCTCAAGGCCACACCAGCTCACACGTGCTGTTGTaGTGGCAGGAGCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: GASLPAAMRGFPPQGHTSSHVLL*WQEHSR
Trigger: TCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGA...GCTGGTGTGGCCTTGAGGAGGGAAGCCTCGCATGGCCGCTGGAAGAGAGGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp AGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTCAGCCCCCGTTGGCGTaGGCACACTCACCCACATCC +
Preference number: 5 (lower is better)
Translates to: SHSAGCSWAQTGPFCNPGQPPLA*AHSPTS
Trigger: GGATGTGGGTGAGTGTGCCAACGCCAACGGGGGCTG...ACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS GCA 90 bp CCCTGCCCTGCCTTCCTCAGCTACATTCTGCAGCCAGTGAGCTCCTaGATGAGAAAGCCCAGGCCCCAGGCACACGTCCAGAGTCACCAC +
Preference number: 5 (lower is better)
Translates to: PCPAFLSYILQPVSS*MRKPRPQAHVQSHH
Trigger: GTGGTGACTCTGGACGTGTGCCTGGGGCCTGGGCTTTCTCATGCAGGAGCTCACTGGCTGCAGAATGTAGCTGAGGAAGGCAGGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494257.1
CDS GCA 90 bp ACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCTaGAAGGCGGAGGGGGCGGGAGACAAACCTGAGCATCATCCTTGC +
Preference number: 5 (lower is better)
Translates to: TVQGAAGPKLAPSAI*KAEGAGDKPEHHPC
Trigger: GCAAGGATGATGCTCAGGTTTGTCTCCCGCCCCCTCCGCCTTGCAGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494257.1
CDS-3UTR CAA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCTGCTGGCAGCCGCCATaGCCCAGGGCGCAGGAGTTA +
Preference number: 5 (lower is better)
Translates to: STRSSGPVKCPSQWSPKACWQPP*PRAQEL
Trigger: TAACTCCTGCGCCCTGGGCAATGGCGGCTGCCAGCA...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp CTCCTCCTCCTGCTGGTGAAATTGTCTGCCCTGGGGCCTCAGCTACCTTGGCTGTACCCGCCAGGGTTGTaGGTGCACACCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LLLLLVKLSALGPQLPWLYPPGL*VHTCWQ
Trigger: CTGCCAGCAGGTGTGCACCAACAACCCTGGCGGGTA...CAGCCAAGGTAGCTGAGGCCCCAGGGCAGACAATTTCACCAGCAGGAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTGTCATCCTGGAAGAGTaGCGGCAGCTCGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: ASLLKATPASKSDRLLGCVILEE*RQLVLE
Trigger: CTCCAGGACGAGCTGCCGCAACTCTTCCAGGATGAC...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp TGCTGTTGTTGTGGCAGGAGCACTCCAGATGGCAGGCGGCTCCGTAGCGCCCAGTGGCACAAGAGCACCTaGTCTGGCAGCTGGGACCAT +
Preference number: 5 (lower is better)
Translates to: CCCCGRSTPDGRRLRSAQWHKST*SGSWDH
Trigger: ATGGTCCCAGCTGCCAGACAAGGTGCTCTTGTGCCA...CTGGGCGCTACGGAGCCGCCTGCCATCTGGAGTGCTCCTGCCACAACAACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCCACACGTGGGTGCAGTaGGGGCCGAAGCGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIHTWVQ*GPKRPC
Trigger: GCAGGGCCGCTTCGGCCCCAACTGCACCCACGTGTG...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp CAGGAGCAGCTGCCGTTGCTGGCGTGGCACAGGCCCCCATTTCTGCAGGAGCAGTCACACGTGCTGTTGTaGTGGCAGGAGCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: QEQLPLLAWHRPPFLQEQSHVLL*WQEHSR
Trigger: TCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGA...CTGCTCCTGCAGAAATGGGGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp CTCCTCCTCCTGCTGGTGAAATTGTCTGCCCTGGGGCCTCAGCTACCTTGGCTGGTGCAGCCCTCTCCATaGGCCACCCCACTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LLLLLVKLSALGPQLPWLVQPSP*ATPLCR
Trigger: TCTGCAGAGTGGGGTGGCCAATGGAGAGGGCTGCAC...CAGCCAAGGTAGCTGAGGCCCCAGGGCAGACAATTTCACCAGCAGGAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCACAGCTGCCGTTCCTGTaGGCACACGGGCTTCTACGG +
Preference number: 5 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPQLPFL*AHGLLR
Trigger: CCGTAGAAGCCCGTGTGCCAACAGGAACGGCAGCTG...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp AGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCAGGTTACAGGCAGCTGCCATCCCTCTaGTCACAGGACTGCGTGTGG +
Preference number: 5 (lower is better)
Translates to: SAGCSWAQTGPFCNPGYRQLPSL*SQDCVW
Trigger: CCACACGCAGTCCTGTGACAAGAGGGATGGCAGCTG...CCTGTAACCTGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp CCGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTGCAATCCTGGCAGTGCCCATCATaGGCACAAGAGCACCTTGTC +
Preference number: 5 (lower is better)
Translates to: PQSQCRVQLGPNWPLLQSWQCPS*AQEHLV
Trigger: GACAAGGTGCTCTTGTGCCAATGATGGGCACTGCCA...GGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS-3UTR CAA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTGGGGCCTCAGCTACCTaGGCTGGTTTTAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: ASLLKATPASKSDRLLGCGASAT*AGFRVM
Trigger: CATCACCCTAAAACCAGCCAAGGTAGCTGAGGCCCC...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGGAGCAGCCGCCGTTGTaGGCCTCACAGCTGTTCACG +
Preference number: 5 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLEQPPL*ASQLFT
Trigger: CGTGAACAGCTGTGAGGCCAACAACGGCGGCTGCTC...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp AGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCAAAGGCCCAGCTGCCATCCCTCTaGTCACAGGACTGCGTGTGG +
Preference number: 5 (lower is better)
Translates to: STRSSGPVKCPSQWSPKAQLPSL*SQDCVW
Trigger: CCACACGCAGTCCTGTGACAAGAGGGATGGCAGCTG...GGCCTTTGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGTCCAAGAGCGACAGGTaGCTGGGCTGTCCACAGCCC +
Preference number: 5 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLSKSDR*LGCPQP
Trigger: GGGCTGTGGACAGCCCAGCAACCTGTCGCTCTTGGA...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp GCCTCAGCCCATGAGTGCCAGGTGCTCGGGAGGGCTGGTCTGTCCTCACCCAGGACGTCTTGGTCGTCGTaGCTTCATGTCAATGACTTC +
Preference number: 5 (lower is better)
Translates to: ASAHECQVLGRAGLSSPRTSWSS*LHVNDF
Trigger: GAAGTCATTGACATGAAGCAACGACGACCAAGACGT...CCTGGGTGAGGACAGACCAGCCCTCCCGAGCACCTGGCACTCATGGGCTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS GCA 90 bp CAGGCAGACAAACTTCTCTGTGAGCGTGTGTTCGCCCCGCAACTCTaGCTCTTCCTCATCGGCCCCGACGTCGTCATCCTGGAAGAGTTG +
Preference number: 5 (lower is better)
Translates to: QADKLLCERVFAPQL*LFLIGPDVVILEEL
Trigger: CAACTCTTCCAGGATGACGACGTCGGGGCCGATGAGGAAGAGGCAGAGTTGCGGGGCGAACACACGCTCACAGAGAAGTTTGTCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS-3UTR CAA 90 bp CAGTCTCTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCAAGGACCCCTGGGTGTaGAGGCAGCCATGGGCACAC +
Preference number: 5 (lower is better)
Translates to: QSLGLSGNECSPSVLLNSKDPWV*RQPWAH
Trigger: GTGTGCCCATGGCTGCCTCAACACCCAGGGGTCCTT...GCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAGAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCGAGCAGCCGCCGTTGTaGGCCTCACAGCTGTTCACG +
Preference number: 5 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIEQPPL*ASQLFT
Trigger: CGTGAACAGCTGTGAGGCCAACAACGGCGGCTGCTC...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAAAAGGAGCCGGCCAGGTaGGTGCAGTGGTGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKKEPAR*VQWCSQ
Trigger: CTGCGAGCACCACTGCACCAACCTGGCCGGCTCCTT...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGTCACAGGAGCCCCCGTaGAGACACCCACACAGCTGT +
Preference number: 5 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLSQEPP*RHPHSC
Trigger: ACAGCTGTGTGGGTGTCTCAACGGGGGCTCCTGTGA...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp GCAGCCCCAGCGTTCTCCTCAATAGCACTGGGAACTGAGATGAGTCCCAACTTCTGCGGACAGGTGAGGTaGCAGTCCGTCCCGAGGAAC +
Preference number: 5 (lower is better)
Translates to: AAPAFSSIALGTEMSPNFCGQVR*QSVPRN
Trigger: GTTCCTCGGGACGGACTGCAACCTCACCTGTCCGCA...GAAGTTGGGACTCATCTCAGTTCCCAGTGCTATTGAGGAGAACGCTGGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAATCGTACCCGCCAGGGTaGTTGGTGCACACCTGCTGG +
Preference number: 5 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKSYPPG*LVHTCW
Trigger: CCAGCAGGTGTGCACCAACAACCCTGGCGGGTACGA...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp CCTGAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGTGGCACAAGAGCACCTaGTCTGGCAGCTGGGACCAT +
Preference number: 5 (lower is better)
Translates to: PESGFLGIGQEMTGSFQLWHKST*SGSWDH
Trigger: ATGGTCCCAGCTGCCAGACAAGGTGCTCTTGTGCCA...CAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCATGGCAGTGCCCATCATaGGCACAAGAGCACCTTGTC +
Preference number: 5 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPWQCPS*AQEHLV
Trigger: GACAAGGTGCTCTTGTGCCAATGATGGGCACTGCCA...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp TATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCAGGAGCAGCTGCCGTaGCTGGCGTGGCACAGGCCC +
Preference number: 5 (lower is better)
Translates to: YLCTLSLFTPPCYSWENLQEQLP*LAWHRP
Trigger: GGGCCTGTGCCACGCCAGCAACGGCAGCTGCTCCTG...GAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS GCA 90 bp CCAGGAGGCAGGTCCCTCCGTTCCTGCAGTCATCACAGGTCAAGCTaGAGTCATGGCCAAAGGAGTCATCCAGGCAGACAAACTTCTCTG +
Preference number: 5 (lower is better)
Translates to: PGGRSLRSCSHHRSS*SHGQRSHPGRQTSL
Trigger: CAGAGAAGTTTGTCTGCCTGGATGACTCCTTTGGCCATGACTGCAGCTTGACCTGTGATGACTGCAGGAACGGAGGGACCTGCCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS-3UTR CAA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAATGGCACCGGCCCCGGTaGGCACAGTTGCATTTCTTG +
Preference number: 5 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKWHRPR*AQLHFL
Trigger: CAAGAAATGCAACTGTGCCAACCGGGGCCGGTGCCA...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp CTGGGTCTCAGCGGTAATGAATGCAGCCCCAGCGTTCTCCTCAATAGCACTGGGTCACACGTGCTGTTGTaGTGGCAGGAGCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: LGLSGNECSPSVLLNSTGSHVLL*WQEHSR
Trigger: TCTGGAGTGCTCCTGCCACAACAACAGCACGTGTGA...CCCAGTGCTATTGAGGAGAACGCTGGGGCTGCATTCATTACCGCTGAGACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS CCA 90 bp CAGGTCCCTCCGTTCCTGCAGTCATCACAGGTCAAGCTGCAGTCATaGCCAAAGGAGTCATCCAGGCAGACAAACTTCTCTGTGAGCGTG +
Preference number: 5 (lower is better)
Translates to: QVPPFLQSSQVKLQS*PKESSRQTNFSVSV
Trigger: CACGCTCACAGAGAAGTTTGTCTGCCTGGATGACTCCTTTGGCCATGACTGCAGCTTGACCTGTGATGACTGCAGGAACGGAGGGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS-3UTR CAA 90 bp CTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGTGGCACCGGCCCCGGTaGGCACAGTTGCATTTCTTG +
Preference number: 5 (lower is better)
Translates to: LYVVSLYASLLFLGESPEWHRPR*AQLHFL
Trigger: CAAGAAATGCAACTGTGCCAACCGGGGCCGGTGCCA...CTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp GAATCAGGGTTTCTGGGGATTGGGCAGGAGATGACAGGCAGCTTCCAGCTGATCTGGCAGTGCCCATCATaGGCACAAGAGCACCTTGTC +
Preference number: 5 (lower is better)
Translates to: ESGFLGIGQEMTGSFQLIWQCPS*AQEHLV
Trigger: GACAAGGTGCTCTTGTGCCAATGATGGGCACTGCCA...GATCAGCTGGAAGCTGCCTGTCATCTCCTGCCCAATCCCCAGAAACCCTGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294599.8
ENST00000356575.9
CDS-3UTR CAA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCATGTCGGGGGTTCCCATaGGGGAGTAATGGTGATATT +
Preference number: 5 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPCRGFP*GSNGDI
Trigger: AATATCACCATTACTCCCCAATGGGAACCCCCGACA...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp GGGCTGTCCACAGCCCTCCACGGCCCTCAAAGGAAGGGCAGTACCAGGAGCTCTATACACAGTGATGTTTaGATACATGGGATGTCTAGT +
Preference number: 5 (lower is better)
Translates to: GLSTALHGPQRKGSTRSSIHSDV*IHGMSS
Trigger: ACTAGACATCCCATGTATCAAAACATCACTGTGTAT...AGAGCTCCTGGTACTGCCCTTCCTTTGAGGGCCGTGGAGGGCTGTGGACAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp GCTTCCCTCCTCAAGGCCACACCAGCCTCCAAGAGCGACAGGTTGCTGGGCTGTCCTCCTTCTTGCTGCTaGAAACTATATAATATATGG +
Preference number: 5 (lower is better)
Translates to: ASLLKATPASKSDRLLGCPPSCC*KLYNIW
Trigger: CCATATATTATATAGTTTCAAGCAGCAAGAAGGAGG...ACAGCCCAGCAACCTGTCGCTCTTGGAGGCTGGTGTGGCCTTGAGGAGGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp CCTTTACATAAATACGGGCTGGGCGACTTCCAGTCCCAGGGCCTAGCACCAAAAAGATCTGAGAACGTCTaGGTCGTCGTTGCTTCATGT +
Preference number: 5 (lower is better)
Translates to: PLHKYGLGDFQSQGLAPKRSENV*VVVASC
Trigger: ACATGAAGCAACGACGACCAAGACGTTCTCAGATCT...TTTTGGTGCTAGGCCCTGGGACTGGAAGTCGCCCAGCCCGTATTTATGTAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp AAGGGCAGTACCAGGAGCTCTGGGCCCGTGAAGTGTCCTTCTCAGTGGTCACCATATATGGTCAGGAGTTaGTTTTTCCGTCGTCATTTG +
Preference number: 5 (lower is better)
Translates to: KGSTRSSGPVKCPSQWSPYMVRS*FFRRHL
Trigger: CAAATGACGACGGAAAAACAAACTCCTGACCATATA...TGGTGACCACTGAGAAGGACACTTCACGGGCCCAGAGCTCCTGGTACTGCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp GCGTTTATTATGTGTGTTGAGAATGTTCAATATCCTCCTTCTTGCTGCTTGAAACCCCGGAAGCCAGCCTaGCAGGAGCAGCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: AFIMCVENVQYPPSCCLKPRKPA*QEQLPS
Trigger: GGATGGCAGCTGCTCCTGCAAGGCTGGCTTCCGGGG...TTTCAAGCAGCAAGAAGGAGGATATTGAACATTCTCAACACACATAATAAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp CTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATTCCTGGGAGAATCTCCTGAGGAATTCCTAGGCCATTaGGGAACTGTGGTGACTGAA +
Preference number: 5 (lower is better)
Translates to: LYVVSLYASLLFLGESPEEFLGH*GTVVTE
Trigger: TTCAGTCACCACAGTTCCCAAATGGCCTAGGAATTC...CTCAGGAGATTCTCCCAGGAATAGCAGGGAGGCGTAAAGAGAGACAACGTACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp CCCTTACCCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCTCTGTGACAGCTCCCTaGCTGTCTGTGAGCAACCAA +
Preference number: 5 (lower is better)
Translates to: PLPISIHLSLYVVSLYASSVTAP*LSVSNQ
Trigger: TTGGTTGCTCACAGACAGCAAGGGAGCTGTCACAGA...GGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGGGTAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp AACATCACAGTTTTCTGGCTCTCCGTGTTTCTCACGTATAGTCTGAGGTCAATTAGAGAGAGTCCTATGTaGCGGTGTGAGTGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: NITVFWLSVFLTYSLRSIRESPM*RCECSP
Trigger: AGGGCTGCACTCACACCGCAACATAGGACTCTCTCT...AATTGACCTCAGACTATACGTGAGAAACACGGAGAGCCAGAAAACTGTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS-3UTR CAA 90 bp CCATTTCCATTCATCTATCTCTGTACGTTGTCTCTCTTTACGCCTCCCTGCTATATCTATCTCTGTACGTaGTCTCTCTTTACGCCTCCC +
Preference number: 5 (lower is better)
Translates to: PFPFIYLCTLSLFTPPCYIYLCT*SLFTPP
Trigger: GGGAGGCGTAAAGAGAGACAACGTACAGAGATAGAT...ATAGCAGGGAGGCGTAAAGAGAGACAACGTACAGAGATAGATGAATGGAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS GCA 72 bp CCGCGCCCGCTCCGCGGAGCCCAAGGTCGCTGCAGGTaGGGAGCGTCCCGGCTTCCCGCCCGCGCCCAAAGT +
Preference number: 6 (lower is better)
Translates to: PRPLRGAQGRCR*GASRLPARAQS
Trigger: ACTTTGGGCGCGGGCGGGAAGCCGGGACGCTCCGCACCTGCAGCGACCTTGGGCTCCGCGGAGCGGGCGCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS GCA 72 bp TCCGCCTCCACGTGCGCCATAGGACGCAGCCACAGGTaGCCGCGCCCGCTCCGCGGAGCCCAAGGTCGCTGC +
Preference number: 6 (lower is better)
Translates to: SASTCAIGRSHR*PRPLRGAQGRC
Trigger: GCAGCGACCTTGGGCTCCGCGGAGCGGGCGCGGGCACCTGTGGCTGCGTCCTATGGCGCACGTGGAGGCGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS CCA 72 bp GTGCGGAGCGTCCCGGCTTCCCGCCCGCGCCCAAAGTaGCACCGCGGAGACCTGATCGCCGGGTCCACCCTG +
Preference number: 6 (lower is better)
Translates to: VRSVPASRPRPK*HRGDLIAGSTL
Trigger: CAGGGTGGACCCGGCGATCAGGTCTCCGCGGTGCCACTTTGGGCGCGGGCGGGAAGCCGGGACGCTCCGCAC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS GCA 72 bp GGGTCACACAGGCCCCCGTTGAGGCAACCGCCGCTGTaGCGGCAGCCAGCTCTGACGTCCCGGGGGAGGCAC +
Preference number: 6 (lower is better)
Translates to: GSHRPPLRQPPL*RQPALTSRGRH
Trigger: GTGCCTCCCCCGGGACGTCAGAGCTGGCTGCCGGCACAGCGGCGGTTGCCTCAACGGGGGCCTGTGTGACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp AGGCAGGTGCCGGTCACAGGGTCGCAGGCCGCCCCCTaGCCACACCCACACACGTGGGTGCAGTTGGGGCCG +
Preference number: 6 (lower is better)
Translates to: RQVPVTGSQAAP*PHPHTWVQLGP
Trigger: CGGCCCCAACTGCACCCACGTGTGTGGGTGTGGGCAGGGGGCGGCCTGCGACCCTGTGACCGGCACCTGCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000475790.5
ENST00000485002.6
ENST00000491842.1
CDS GCA 72 bp ACGCACGGCTGGCGGCGGCCCACCAGGGTCAGCTCCTaGTCAGCACACACGTGGGGCATGCCGGGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: THGWRRPTRVSS*SAHTWGMPGCS
Trigger: GCTGCAGCCCGGCATGCCCCACGTGTGTGCTGAGCAGGAGCTGACCCTGGTGGGCCGCCGCCAGCCGTGCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp CCGGCCTTCCACACCGGCACCGTGTGGCTTAAGGCCTaGACGCACGGCTGGCGGCGGCCCACCAGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: PAFHTGTVWLKA*THGWRRPTRVS
Trigger: GCTGACCCTGGTGGGCCGCCGCCAGCCGTGCGTGCAGGCCTTAAGCCACACGGTGCCGGTGTGGAAGGCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp TGCCACCCACAGCCGGCCTTCCACACCGGCACCGTGTaGCTTAAGGCCTGCACGCACGGCTGGCGGCGGCCC +
Preference number: 6 (lower is better)
Translates to: CHPQPAFHTGTV*LKACTHGWRRP
Trigger: GGGCCGCCGCCAGCCGTGCGTGCAGGCCTTAAGCCACACGGTGCCGGTGTGGAAGGCCGGCTGTGGGTGGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp AGTGCCTCGCTGGTCCACCGCTCCGGGATGTGGGTCTaGTGGAGGCGGGCAGTGTGCCCGCTGAGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: SASLVHRSGMWV*WRRAVCPLSPG
Trigger: CCCAGGGCTCAGCGGGCACACTGCCCGCCTCCAGCAGACCCACATCCCGGAGCGGTGGACCAGCGAGGCACT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000494257.1
CDS CCA 72 bp CGGGCAGGTGAGGTGGCAGAAGCGGCCGTAGAGCCCTaGGTCGCAGAGGCAGGCCCCGTAGAGGCGGTGGCA +
Preference number: 6 (lower is better)
Translates to: RAGEVAEAAVEP*VAEAGPVEAVA
Trigger: TGCCACCGCCTCTACGGGGCCTGCCTCTGCGACCCAGGGCTCTACGGCCGCTTCTGCCACCTCACCTGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp CAGGCTCCGGTCTCAGGGTCGCAGCGGGCAGCGTGCTaGCATGCTGGGCAGATCTCCTGGCAGCCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: QAPVSGSQRAAC*HAGQISWQPSP
Trigger: GGGGCTGGGCTGCCAGGAGATCTGCCCAGCATGCCAGCACGCTGCCCGCTGCGACCCTGAGACCGGAGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp GCCTCGCTGGTCCACCGCTCCGGGATGTGGGTCTGCTaGAGGCGGGCAGTGTGCCCGCTGAGCCCTGGGCTA +
Preference number: 6 (lower is better)
Translates to: ASLVHRSGMWVC*RRAVCPLSPGL
Trigger: TAGCCCAGGGCTCAGCGGGCACACTGCCCGCCTCCAGCAGACCCACATCCCGGAGCGGTGGACCAGCGAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000494257.1
CDS GCA 72 bp CAGCAGCACCAACGCCAGGACCACCGCGCGCCCCGCTaGCCTCGCCTCTTCAAGGAACGACATCGTGCGCGC +
Preference number: 6 (lower is better)
Translates to: QQHQRQDHRAPR*PRLFKERHRAR
Trigger: GCGCGCACGATGTCGTTCCTTGAAGAGGCGAGGGCAGCGGGGCGCGCGGTGGTCCTGGCGTTGGTGCTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp CCCACATCCGAGAGGCAGCCCTCCTCGTCGGGCTGCTaGATCCACCCTCGGCAGCACCTGAGCACGGTCCGG +
Preference number: 6 (lower is better)
Translates to: PTSERQPSSSGC*IHPRQHLSTVR
Trigger: CCGGACCGTGCTCAGGTGCTGCCGAGGGTGGATGCAGCAGCCCGACGAGGAGGGCTGCCTCTCGGATGTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS CCA 72 bp ACCGGCACCGTGTGGCTTAAGGCCTGCACGCACGGCTaGCGGCGGCCCACCAGGGTCAGCTCCTGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: TGTVWLKACTHG*RRPTRVSSCSA
Trigger: TGCTGAGCAGGAGCTGACCCTGGTGGGCCGCCGCCAGCCGTGCGTGCAGGCCTTAAGCCACACGGTGCCGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp CCACGGTGTCCCGGCACCGACCCGCACAGCCCCCGTTaGCGTTGGCACACTCACCCACATCCGAGAGGCAGC +
Preference number: 6 (lower is better)
Translates to: PRCPGTDPHSPR*RWHTHPHPRGS
Trigger: GCTGCCTCTCGGATGTGGGTGAGTGTGCCAACGCCAACGGGGGCTGTGCGGGTCGGTGCCGGGACACCGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS CAA 72 bp GTGTCCCGGCACCGACCCGCACAGCCCCCGTTGGCGTaGGCACACTCACCCACATCCGAGAGGCAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: VSRHRPAQPPLA*AHSPTSERQPS
Trigger: GGAGGGCTGCCTCTCGGATGTGGGTGAGTGTGCCAACGCCAACGGGGGCTGTGCGGGTCGGTGCCGGGACAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS CAA 72 bp CCCACGGTGTCCCGGCACCGACCCGCACAGCCCCCGTaGGCGTTGGCACACTCACCCACATCCGAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: PTVSRHRPAQPP*ALAHSPTSERQ
Trigger: CTGCCTCTCGGATGTGGGTGAGTGTGCCAACGCCAACGGGGGCTGTGCGGGTCGGTGCCGGGACACCGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS TCA 72 bp CCTCGTCGGGCTGCTGCATCCACCCTCGGCAGCACCTaGGCACGGTCCGGGCCTCCGTGGTATACACCTGCC +
Preference number: 6 (lower is better)
Translates to: PRRAAASTLGST*ARSGPPWYTPA
Trigger: GGCAGGTGTATACCACGGAGGCCCGGACCGTGCTCAGGTGCTGCCGAGGGTGGATGCAGCAGCCCGACGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp GAGCACTGGAAGGAGCCGGCCAGGTTGGTGCAGTGGTaGTCGCAGCCGCCACGGCTGGAGGCGCACTCATCC +
Preference number: 6 (lower is better)
Translates to: EHWKEPARLVQW*SQPPRLEAHSS
Trigger: GGATGAGTGCGCCTCCAGCCGTGGCGGCTGCGAGCACCACTGCACCAACCTGGCCGGCTCCTTCCAGTGCTC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp CATTCAGCCGAGAGGCAGCCCTCCTCGTCGGGCTGCTaGATCCACCCTCGGCAGCACCTGAGCACGGTCCGG +
Preference number: 6 (lower is better)
Translates to: HSAERQPSSSGC*IHPRQHLSTVR
Trigger: CCGGACCGTGCTCAGGTGCTGCCGAGGGTGGATGCAGCAGCCCGACGAGGAGGGCTGCCTCTCGGCTGAATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS GCA 72 bp GACACTGGCACATCTGCGCACAGTCCTCCCCAAAGCTaGCGGGTGGGCAGGCCTGCTCGCAGCCGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: DTGTSAHSPPQS*RVGRPARSRSQ
Trigger: CTGGCTCCGGCTGCGAGCAGGCCTGCCCACCCGGCAGCTTTGGGGAGGACTGTGCGCAGATGTGCCAGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp CAGGAGCACTGGAAGGAGCCGGCCAGGTTGGTGCAGTaGTGCTCGCAGCCGCCACGGCTGGAGGCGCACTCA +
Preference number: 6 (lower is better)
Translates to: QEHWKEPARLVQ*CSQPPRLEAHS
Trigger: TGAGTGCGCCTCCAGCCGTGGCGGCTGCGAGCACCACTGCACCAACCTGGCCGGCTCCTTCCAGTGCTCCTG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp GCGGGCTCCACGGGACTGCCTCTACTAGTGCCTCGCTaGTCCACCGCTCCGGGATGTGGGTCTGCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: AGSTGLPLLVPR*STAPGCGSAGG
Trigger: GCCTCCAGCAGACCCACATCCCGGAGCGGTGGACCAGCGAGGCACTAGTAGAGGCAGTCCCGTGGAGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000494257.1
CDS CCA 72 bp GGCCGTGGTAGCCAGCAGCACATGAGCAGGTCCCGGTaGCAGGGTGGCAGGCCGGGTTCTCACCGGGACACT +
Preference number: 6 (lower is better)
Translates to: GRGSQQHMSRSR*QGGRPGSHRDT
Trigger: AGTGTCCCGGTGAGAACCCGGCCTGCCACCCTGCCACCGGGACCTGCTCATGTGCTGCTGGCTACCACGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp TGTCCCGGCACCGACCCGCACAGCCCCCGTTGGCGTTaGCACACTCACCCACATCCGAGAGGCAGCCCTCCT +
Preference number: 6 (lower is better)
Translates to: CPGTDPHSPRWR*HTHPHPRGSPP
Trigger: AGGAGGGCTGCCTCTCGGATGTGGGTGAGTGTGCCAACGCCAACGGGGGCTGTGCGGGTCGGTGCCGGGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS TCA 72 bp CAGGCCCCGCTGACGTGGTCACAGGCTGCTCCATGCTaGCACTGGCACCGCTGCTCACAGCCGGGCCCAAAG +
Preference number: 6 (lower is better)
Translates to: QAPLTWSQAAPC*HWHRCSQPGPK
Trigger: CTTTGGGCCCGGCTGTGAGCAGCGGTGCCAGTGTCAGCATGGAGCAGCCTGTGACCACGTCAGCGGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS TCA 72 bp CTGGCAGCCAGCCCCGTGGAAGCCAGGGGGACAGGCTaGAGGACGCCGGTTACCACGAGACAAGGGCACACG +
Preference number: 6 (lower is better)
Translates to: LAASPVEARGTG*RTPVTTRQGHT
Trigger: CGTGTGCCCTTGTCTCGTGGTAACCGGCGTCCTTCAGCCTGTCCCCCTGGCTTCCACGGGGCTGGCTGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461795.1
CDS GCA 72 bp GGGGACATGTGCACAGGGGCCCAGCACTGGTGTGGCTaGAGCCATGGGAGCAGCCGCCGTTGTTGGCCTCAC +
Preference number: 6 (lower is better)
Translates to: GDMCTGAQHWCG*SHGSSRRCWPH
Trigger: GTGAGGCCAACAACGGCGGCTGCTCCCATGGCTGCAGCCACACCAGTGCTGGGCCCCTGTGCACATGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp CTGCATTCAGCCGAGAGGCAGCCCTCCTCGTCGGGCTaGTGCATCCACCCTCGGCAGCACCTGAGCACGGTC +
Preference number: 6 (lower is better)
Translates to: LHSAERQPSSSG*CIHPRQHLSTV
Trigger: GACCGTGCTCAGGTGCTGCCGAGGGTGGATGCAGCAGCCCGACGAGGAGGGCTGCCTCTCGGCTGAATGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356575.9
CDS GCA 72 bp TGGCAGGCCGGGTTCTCACCGGGACACTGGCACATCTaGGCACAGTCCTCCCCAAAGCTGCCGGGTGGGCAG +
Preference number: 6 (lower is better)
Translates to: WQAGFSPGHWHI*AQSSPKLPGGQ
Trigger: CTGCCCACCCGGCAGCTTTGGGGAGGACTGTGCGCAGATGTGCCAGTGTCCCGGTGAGAACCCGGCCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp TCACCCACATCCGAGAGGCAGCCCTCCTCGTCGGGCTaGTGCATCCACCCTCGGCAGCACCTGAGCACGGTC +
Preference number: 6 (lower is better)
Translates to: SPTSERQPSSSG*CIHPRQHLSTV
Trigger: GACCGTGCTCAGGTGCTGCCGAGGGTGGATGCAGCAGCCCGACGAGGAGGGCTGCCTCTCGGATGTGGGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485002.6
CDS CCA 72 bp CACGGGCTTCTACGGACACAATGCCTGCCGTCCTCCTaGAGCTGGAACCCGGGCCGGCACTGGCAGCGATGC +
Preference number: 6 (lower is better)
Translates to: HGLLRTQCLPSS*SWNPGRHWQRC
Trigger: GCATCGCTGCCAGTGCCGGCCCGGGTTCCAGCTCCAGGAGGACGGCAGGCATTGTGTCCGTAGAAGCCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp ACGTGGCACTCACAGCGGGCGAGGCCCCGGACCACCTaGCACCTGTGCATGCAGCTGCCGTTCCTGTTGGCA +
Preference number: 6 (lower is better)
Translates to: TWHSQRARPRTT*HLCMQLPFLLA
Trigger: TGCCAACAGGAACGGCAGCTGCATGCACAGGTGCCAGGTGGTCCGGGGCCTCGCCCGCTGTGAGTGCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp CGGCGTAGCAGCCGCACTCGTACCCGCCAGGGTTGTTaGTGCACACCTGCTGGCAGCACGGGCTGTCTGCAC +
Preference number: 6 (lower is better)
Translates to: RRSSRTRTRQGC*CTPAGSTGCLH
Trigger: GTGCAGACAGCCCGTGCTGCCAGCAGGTGTGCACCAACAACCCTGGCGGGTACGAGTGCGGCTGCTACGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp CCAGGTTGGTGCAGTGGTGCTCGCAGCCGCCACGGCTaGAGGCGCACTCATCCACATCCTCACAGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: PGWCSGARSRHG*RRTHPHPHSRS
Trigger: GCTGCGGCTGTGAGGATGTGGATGAGTGCGCCTCCAGCCGTGGCGGCTGCGAGCACCACTGCACCAACCTGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp AAGAGTTGCGGCAGCTCGTCCTGGAGCACGGCAATGTaGGGCAGGGGCCGCACGAAAGGCAGCTCGCCGTCC +
Preference number: 6 (lower is better)
Translates to: KSCGSSSWSTAM*GRGRTKGSSPS
Trigger: GGACGGCGAGCTGCCTTTCGTGCGGCCCCTGCCCCACATTGCCGTGCTCCAGGACGAGCTGCCGCAACTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp GCCCCCGTTGAGACACCCACACAGCTGTTCACAGCCTaGCCCATACCGCCCGGGCGGACATCCCTGCTCGCA +
Preference number: 6 (lower is better)
Translates to: APVETPTQLFTA*PIPPGRTSLLA
Trigger: TGCGAGCAGGGATGTCCGCCCGGGCGGTATGGGCCAGGCTGTGAACAGCTGTGTGGGTGTCTCAACGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294599.8
CDS CCA 72 bp TCTACTAGTGCCTCGCTGGTCCACCGCTCCGGGATGTaGGTCTGCTGGAGGCGGGCAGTGTGCCCGCTGAGC +
Preference number: 6 (lower is better)
Translates to: STSASLVHRSGM*VCWRRAVCPLS
Trigger: GCTCAGCGGGCACACTGCCCGCCTCCAGCAGACCCACATCCCGGAGCGGTGGACCAGCGAGGCACTAGTAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000494257.1
CDS CCA 72 bp GTGGCAGGGTGGCAGGCCGGGTTCTCACCGGGACACTaGCACATCTGCGCACAGTCCTCCCCAAAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: VAGWQAGFSPGH*HICAQSSPKLP
Trigger: CGGCAGCTTTGGGGAGGACTGTGCGCAGATGTGCCAGTGTCCCGGTGAGAACCCGGCCTGCCACCCTGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS CAA 72 bp GTCCCTCCGTTCTGGCAGAGGCAGGAATGCCGACAGTaGTCGCCGTACAGGCCGGCAGGGCAGGCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: VPPFWQRQECRQ*SPYRPAGQACR
Trigger: CCTGCAGGCCTGCCCTGCCGGCCTGTACGGCGACAACTGTCGGCATTCCTGCCTCTGCCAGAACGGAGGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS CAA 90 bp CGCTCGCCCCGGAAGCCAGCCTTGCAGGAGCAGCTGCCATCCCTCTaGTCACAGGACTGCGTGTGGGGCTGCACACACTGGCACTCCTCC +
Preference number: 6 (lower is better)
Translates to: RSPRKPALQEQLPSL*SQDCVWGCTHWHSS
Trigger: GGAGGAGTGCCAGTGTGTGCAGCCCCACACGCAGTCCTGTGACAAGAGGGATGGCAGCTGCTCCTGCAAGGCTGGCTTCCGGGGCGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS TCA 72 bp GGCCCACGTAGCCAGCCTCACACAGACACAGGCCGCTaGTGGCATCACAGCTCCCGTGGCCAGCGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: GPRSQPHTDTGR*WHHSSRGQRCS
Trigger: ACTGCAGCGCTGGCCACGGGAGCTGTGATGCCATCAGCGGCCTGTGTCTGTGTGAGGCTGGCTACGTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp GCCCCAGGCACACGTCCAGAGTCACCACCGAGTTCCTaGCCCGCCCCAGGAGGGCAAACAGGAGCCAGTGTT +
Preference number: 6 (lower is better)
Translates to: APGTRPESPPSS*PAPGGQTGASV
Trigger: AACACTGGCTCCTGTTTGCCCTCCTGGGGCGGGGCAGGAACTCGGTGGTGACTCTGGACGTGTGCCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494257.1
CDS CCA 72 bp CTGCCGTCCTCCTGGAGCTGGAACCCGGGCCGGCACTaGCAGCGATGCCGAGTGATTGTGAGCTGGACACAG +
Preference number: 6 (lower is better)
Translates to: LPSSWSWNPGRH*QRCRVIVSWTQ
Trigger: CTGTGTCCAGCTCACAATCACTCGGCATCGCTGCCAGTGCCGGCCCGGGTTCCAGCTCCAGGAGGACGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp CTTCTACGGACACAATGCCTGCCGTCCTCCTGGAGCTaGAACCCGGGCCGGCACTGGCAGCGATGCCGAGTG +
Preference number: 6 (lower is better)
Translates to: LLRTQCLPSSWS*NPGRHWQRCRV
Trigger: CACTCGGCATCGCTGCCAGTGCCGGCCCGGGTTCCAGCTCCAGGAGGACGGCAGGCATTGTGTCCGTAGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp CTCTTGTCACAGGACTGCGTGTGGGGCTGCACACACTaGCACTCCTCCGAGCAGCCCGGCCCAAAGGCCCAC +
Preference number: 6 (lower is better)
Translates to: LLSQDCVWGCTH*HSSEQPGPKAH
Trigger: GTGGGCCTTTGGGCCGGGCTGCTCGGAGGAGTGCCAGTGTGTGCAGCCCCACACGCAGTCCTGTGACAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp GCCCCCGTTGAGACACCCACACAGCTGTTCACAGCCTaGCCCATACCGCCCGGGCGGACATCGTTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: APVETPTQLFTA*PIPPGRTSLLA
Trigger: TGCCAGCAACGATGTCCGCCCGGGCGGTATGGGCCAGGCTGTGAACAGCTGTGTGGGTGTCTCAACGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp CCGCGGCAGAGCCCAGGTGGAGTGAAGCCTTCTGCCTaGGTGTGTGCGGGAGCTAAGACCTTGGGCCTCGGT +
Preference number: 6 (lower is better)
Translates to: PRQSPGGVKPSA*VCAGAKTLGLG
Trigger: ACCGAGGCCCAAGGTCTTAGCTCCCGCACACACCCAGGCAGAAGGCTTCACTCCACCTGGGCTCTGCCGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494257.1
CDS GCA 72 bp TCCTGGAGCTGGAACCCGGGCCGGCACTGGCAGCGATaGCGAGTGATTGTGAGCTGGACACAGTGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: SWSWNPGRHWQR*RVIVSWTQWCW
Trigger: CCAGCACCACTGTGTCCAGCTCACAATCACTCGGCATCGCTGCCAGTGCCGGCCCGGGTTCCAGCTCCAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp CCGCACTCGTACCCGCCAGGGTTGTTGGTGCACACCTaGTGGCAGCACGGGCTGTCTGCACAGTCGTCGACA +
Preference number: 6 (lower is better)
Translates to: PHSYPPGLLVHT*WQHGLSAQSST
Trigger: TGTCGACGACTGTGCAGACAGCCCGTGCTGCCAGCAGGTGTGCACCAACAACCCTGGCGGGTACGAGTGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp TCCTCATCGGCCCCGACGTCGTCATCCTGGAAGAGTTaGGGCAGCTCGTCCTGGAGCACGGCAATGTGGGGC +
Preference number: 6 (lower is better)
Translates to: SSSAPTSSSWKS*GSSSWSTAMWG
Trigger: GCCCCACATTGCCGTGCTCCAGGACGAGCTGCCGCAACTCTTCCAGGATGACGACGTCGGGGCCGATGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp CATCACAGGCAGCTCCGGCGGTGCAGTTGCAGGCACTaGGACAGTCCAATCCAAAGAAGCCGGCCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: HHRQLRRCSCRH*DSPIQRSRPGR
Trigger: CCTGCCCGGCCGGCTTCTTTGGATTGGACTGTCGCAGTGCCTGCAACTGCACCGCCGGAGCTGCCTGTGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp AGTGCAGGGTGCAGCTGGGCCCAAACTGGCCCCTTCTaGAATCTGCAAGGCGGAGGGGGCGGGAGACAAACC +
Preference number: 6 (lower is better)
Translates to: SAGCSWAQTGPF*NLQGGGGGRQT
Trigger: GGTTTGTCTCCCGCCCCCTCCGCCTTGCAGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494257.1
CDS CCA 72 bp TGGTCACCAAAGGCCAGGGTCCCCTCTGGCTGGGACTaGAGAGGCGGGCTCCACGGGACTGCCTCTACTAGT +
Preference number: 6 (lower is better)
Translates to: WSPKARVPSGWD*RGGLHGTASTS
Trigger: ACTAGTAGAGGCAGTCCCGTGGAGCCCGCCTCTCCAGTCCCAGCCAGAGGGGACCCTGGCCTTTGGTGACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000494257.1
CDS CAA 90 bp AGGCAGGAGCCATTCACGGCATCACAGGCAGCTCCGGCGGTGCAGTaGCAGGCACTGCGACAGTCCAATCCAAAGAAGCCGGCCGGGCAG +
Preference number: 6 (lower is better)
Translates to: RQEPFTASQAAPAVQ*QALRQSNPKKPAGQ
Trigger: CTGCCCGGCCGGCTTCTTTGGATTGGACTGTCGCAGTGCCTGCAACTGCACCGCCGGAGCTGCCTGTGATGCCGTGAATGGCTCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS TCA 72 bp AGTGTTCAGGGATGCCCCCTCAGGGCACAACAGGCCTaGGAGCCACAAGGCCAGGTAAGCAGCCCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SVQGCPLRAQQA*EPQGQVSSPSR
Trigger: CCTGCTGGGGCTGCTTACCTGGCCTTGTGGCTCTCAGGCCTGTTGTGCCCTGAGGGGGCATCCCTGAACACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494257.1
CDS GCA 72 bp GGTGTTGAGGCAGCCATGGGCACACTGGGCCAGCCCTaGGGCACATTCGTCCACATCTTCACAGGCCTTGCC +
Preference number: 6 (lower is better)
Translates to: GVEAAMGTLGQP*GTFVHIFTGLA
Trigger: GGCAAGGCCTGTGAAGATGTGGACGAATGTGCCGCAGGGCTGGCCCAGTGTGCCCATGGCTGCCTCAACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp GGGGCACAGCTGCAGTGTCCGGTGGCTGGGTGGCAGTaGCCATCATTGGCACAAGAGCACCTTGTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: GAQLQCPVAGWQ*PSLAQEHLVWQ
Trigger: CTGCCAGACAAGGTGCTCTTGTGCCAATGATGGGCACTGCCACCCAGCCACCGGACACTGCAGCTGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp ACGTCGTCATCCTGGAAGAGTTGCGGCAGCTCGTCCTaGAGCACGGCAATGTGGGGCAGGGGCCGCACGAAA +
Preference number: 6 (lower is better)
Translates to: TSSSWKSCGSSS*STAMWGRGRTK
Trigger: TTTCGTGCGGCCCCTGCCCCACATTGCCGTGCTCCAGGACGAGCTGCCGCAACTCTTCCAGGATGACGACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp TCTGCCTCTTCCTCATCGGCCCCGACGTCGTCATCCTaGAAGAGTTGCGGCAGCTCGTCCTGGAGCACGGCA +
Preference number: 6 (lower is better)
Translates to: SASSSSAPTSSS*KSCGSSSWSTA
Trigger: TGCCGTGCTCCAGGACGAGCTGCCGCAACTCTTCCAGGATGACGACGTCGGGGCCGATGAGGAAGAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp CCGCAGTCACAGTGCAGGGTGCAGCTGGGCCCAAACTaGCCCCTTCTGCAATCCCTCTCACAGAAGTGGCCG +
Preference number: 6 (lower is better)
Translates to: PQSQCRVQLGPN*PLLQSLSQKWP
Trigger: CGGCCACTTCTGTGAGAGGGATTGCAGAAGGGGCCAGTTTGGGCCCAGCTGCACCCTGCACTGTGACTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491842.1
CDS CAA 72 bp TTCCTCATCGGCCCCGACGTCGTCATCCTGGAAGAGTaGCGGCAGCTCGTCCTGGAGCACGGCAATGTGGGG +
Preference number: 6 (lower is better)
Translates to: FLIGPDVVILEE*RQLVLEHGNVG
Trigger: CCCCACATTGCCGTGCTCCAGGACGAGCTGCCGCAACTCTTCCAGGATGACGACGTCGGGGCCGATGAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CAA 90 bp GTCCGGTGGCTGGGTGGCAGTGCCCATCATTGGCACAAGAGCACCTaGTCTGGCAGCTGGGACCATACCAGCCTGCTGGGCACACGTCCT +
Preference number: 6 (lower is better)
Translates to: VRWLGGSAHHWHKST*SGSWDHTSLLGTRP
Trigger: AGGACGTGTGCCCAGCAGGCTGGTATGGTCCCAGCTGCCAGACAAGGTGCTCTTGTGCCAATGATGGGCACTGCCACCCAGCCACCGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CAA 90 bp GGGGCACAGCTGCAGTGTCCGGTGGCTGGGTGGCAGTGCCCATCATaGGCACAAGAGCACCTTGTCTGGCAGCTGGGACCATACCAGCCT +
Preference number: 6 (lower is better)
Translates to: GAQLQCPVAGWQCPS*AQEHLVWQLGPYQP
Trigger: AGGCTGGTATGGTCCCAGCTGCCAGACAAGGTGCTCTTGTGCCAATGATGGGCACTGCCACCCAGCCACCGGACACTGCAGCTGTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CAA 90 bp TGCCGAGTGATTGTGAGCTGGACACAGTGGTGCTGGCAGCCGCCATaGCCCAGGGCGCAGGAGTTAATGGCCAGGCAGGTCCTGCTGTCA +
Preference number: 6 (lower is better)
Translates to: CRVIVSWTQWCWQPP*PRAQELMARQVLLS
Trigger: TGACAGCAGGACCTGCCTGGCCATTAACTCCTGCGCCCTGGGCAATGGCGGCTGCCAGCACCACTGTGTCCAGCTCACAATCACTCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp CAGCGATGCCGAGTGATTGTGAGCTGGACACAGTGGTaGTGGCAGCCGCCATTGCCCAGGGCGCAGGAGTTA +
Preference number: 6 (lower is better)
Translates to: QRCRVIVSWTQW*WQPPLPRAQEL
Trigger: TAACTCCTGCGCCCTGGGCAATGGCGGCTGCCAGCACCACTGTGTCCAGCTCACAATCACTCGGCATCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp TTGCAGGAGCAGCTGCCATCCCTCTTGTCACAGGACTaGGTGTGGGGCTGCACACACTGGCACTCCTCCGAG +
Preference number: 6 (lower is better)
Translates to: LQEQLPSLLSQD*VWGCTHWHSSE
Trigger: CTCGGAGGAGTGCCAGTGTGTGCAGCCCCACACGCAGTCCTGTGACAAGAGGGATGGCAGCTGCTCCTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp GCCCATCATTGGCACAAGAGCACCTTGTCTGGCAGCTaGGACCATACCAGCCTGCTGGGCACACGTCCTGGC +
Preference number: 6 (lower is better)
Translates to: AHHWHKSTLSGS*DHTSLLGTRPG
Trigger: GCCAGGACGTGTGCCCAGCAGGCTGGTATGGTCCCAGCTGCCAGACAAGGTGCTCTTGTGCCAATGATGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CAA 72 bp ATTGTGAGCTGGACACAGTGGTGCTGGCAGCCGCCATaGCCCAGGGCGCAGGAGTTAATGGCCAGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: IVSWTQWCWQPP*PRAQELMARQV
Trigger: GACCTGCCTGGCCATTAACTCCTGCGCCCTGGGCAATGGCGGCTGCCAGCACCACTGTGTCCAGCTCACAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CAA 72 bp ACCACCTGGCACCTGTGCATGCAGCTGCCGTTCCTGTaGGCACACGGGCTTCTACGGACACAATGCCTGCCG +
Preference number: 6 (lower is better)
Translates to: TTWHLCMQLPFL*AHGLLRTQCLP
Trigger: CGGCAGGCATTGTGTCCGTAGAAGCCCGTGTGCCAACAGGAACGGCAGCTGCATGCACAGGTGCCAGGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CAA 72 bp CTGGGTGGCAGTGCCCATCATTGGCACAAGAGCACCTaGTCTGGCAGCTGGGACCATACCAGCCTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: LGGSAHHWHKST*SGSWDHTSLLG
Trigger: GCCCAGCAGGCTGGTATGGTCCCAGCTGCCAGACAAGGTGCTCTTGTGCCAATGATGGGCACTGCCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp CATTCACGGCATCACAGGCAGCTCCGGCGGTGCAGTTaGAGGCACTGCGACAGTCCAATCCAAAGAAGCCGG +
Preference number: 6 (lower is better)
Translates to: HSRHHRQLRRCS*RHCDSPIQRSR
Trigger: CCGGCTTCTTTGGATTGGACTGTCGCAGTGCCTGCAACTGCACCGCCGGAGCTGCCTGTGATGCCGTGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp GCCTTCCTCAGCTACATTCTGCAGCCAGTGAGCTCCTaGATGAGAAAGCCCAGGCCCCAGGCACACGTCCAG +
Preference number: 6 (lower is better)
Translates to: AFLSYILQPVSS*MRKPRPQAHVQ
Trigger: CTGGACGTGTGCCTGGGGCCTGGGCTTTCTCATGCAGGAGCTCACTGGCTGCAGAATGTAGCTGAGGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494257.1
CDS CCA 72 bp TGGCAGTGCCCATCATTGGCACAAGAGCACCTTGTCTaGCAGCTGGGACCATACCAGCCTGCTGGGCACACG +
Preference number: 6 (lower is better)
Translates to: WQCPSLAQEHLV*QLGPYQPAGHT
Trigger: CGTGTGCCCAGCAGGCTGGTATGGTCCCAGCTGCCAGACAAGGTGCTCTTGTGCCAATGATGGGCACTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp TGCAGTGTCCGGTGGCTGGGTGGCAGTGCCCATCATTaGCACAAGAGCACCTTGTCTGGCAGCTGGGACCAT +
Preference number: 6 (lower is better)
Translates to: CSVRWLGGSAHH*HKSTLSGSWDH
Trigger: ATGGTCCCAGCTGCCAGACAAGGTGCTCTTGTGCCAATGATGGGCACTGCCACCCAGCCACCGGACACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CAA 72 bp CCATTCACGGCATCACAGGCAGCTCCGGCGGTGCAGTaGCAGGCACTGCGACAGTCCAATCCAAAGAAGCCG +
Preference number: 6 (lower is better)
Translates to: PFTASQAAPAVQ*QALRQSNPKKP
Trigger: CGGCTTCTTTGGATTGGACTGTCGCAGTGCCTGCAACTGCACCGCCGGAGCTGCCTGTGATGCCGTGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp GTTGTTGGTGCACACCTGCTGGCAGCACGGGCTGTCTaGACAGTCGTCGACATCGATGCAGGTCCTCTGATC +
Preference number: 6 (lower is better)
Translates to: VVGAHLLAARAV*TVVDIDAGPLI
Trigger: GATCAGAGGACCTGCATCGATGTCGACGACTGTGCAGACAGCCCGTGCTGCCAGCAGGTGTGCACCAACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp AAACTTCTCTGTGAGCGTGTGTTCGCCCCGCAACTCTaGCTCTTCCTCATCGGCCCCGACGTCGTCATCCTG +
Preference number: 6 (lower is better)
Translates to: KLLCERVFAPQL*LFLIGPDVVIL
Trigger: CAGGATGACGACGTCGGGGCCGATGAGGAAGAGGCAGAGTTGCGGGGCGAACACACGCTCACAGAGAAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp AGGAGCCATTCACGGCATCACAGGCAGCTCCGGCGGTaGAGTTGCAGGCACTGCGACAGTCCAATCCAAAGA +
Preference number: 6 (lower is better)
Translates to: RSHSRHHRQLRR*SCRHCDSPIQR
Trigger: TCTTTGGATTGGACTGTCGCAGTGCCTGCAACTGCACCGCCGGAGCTGCCTGTGATGCCGTGAATGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS GCA 72 bp CCTCGGTTTCCCCTGAGGAGTAAACAGTCCCTGCCCTaGCTTCCTCAGCTACATTCTGCAGCCAGTGAGCTC +
Preference number: 6 (lower is better)
Translates to: PRFPLRSKQSLP*LPQLHSAASEL
Trigger: GAGCTCACTGGCTGCAGAATGTAGCTGAGGAAGGCAGGGCAGGGACTGTTTACTCCTCAGGGGAAACCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494257.1
CDS CAA 90 bp CCGGTTACCACGAGACAAGGGCACACGGTGGCAGAAATGTCCAGTTaGCCCAGAGTGAGTAAAACCCGCCAATCCAGGGGCCCGAGAAAA +
Preference number: 6 (lower is better)
Translates to: PVTTRQGHTVAEMSS*PRVSKTRQSRGPRK
Trigger: TTTTCTCGGGCCCCTGGATTGGCGGGTTTTACTCACTCTGGGCAAACTGGACATTTCTGCCACCGTGTGCCCTTGTCTCGTGGTAACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461795.1
CDS CAA 72 bp ACGAGACAAGGGCACACGGTGGCAGAAATGTCCAGTTaGCCCAGAGTGAGTAAAACCCGCCAATCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: TRQGHTVAEMSS*PRVSKTRQSRG
Trigger: GCCCCTGGATTGGCGGGTTTTACTCACTCTGGGCAAACTGGACATTTCTGCCACCGTGTGCCCTTGTCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461795.1
CDS GCA 72 bp AGGTCCCTCCGTTCCTGCAGTCATCACAGGTCAAGCTaGAGTCATGGCCAAAGGAGTCATCCAGGCAGACAA +
Preference number: 6 (lower is better)
Translates to: RSLRSCSHHRSS*SHGQRSHPGRQ
Trigger: TTGTCTGCCTGGATGACTCCTTTGGCCATGACTGCAGCTTGACCTGTGATGACTGCAGGAACGGAGGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6
CDS CCA 72 bp CCGTTCCTGCAGTCATCACAGGTCAAGCTGCAGTCATaGCCAAAGGAGTCATCCAGGCAGACAAACTTCTCT +
Preference number: 6 (lower is better)
Translates to: PFLQSSQVKLQS*PKESSRQTNFS
Trigger: AGAGAAGTTTGTCTGCCTGGATGACTCCTTTGGCCATGACTGCAGCTTGACCTGTGATGACTGCAGGAACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294599.8
ENST00000356575.9
ENST00000485002.6