RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MEGF10 (Homo sapiens)

Ensembl gene IDs: ENSG00000145794

Ensembl transcript IDs: ENST00000274473.6, ENST00000418761.6, ENST00000503335.7, ENST00000506709.1, ENST00000508365.5, ENST00000510513.1, ENST00000510828.5, ENST00000515002.1, ENST00000515622.1

Found 694 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTAACAGCAATGGGAAATCACATCTCTAACTCCTTCGAATCCACCTaGACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCT +
Preference number: 1 (lower is better)
Translates to: LTAMGNHISNSFEST*TKSTYSPCQPQLSA
Trigger: AGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGATTCGAAGGAGTTAGAGATGTGATTTCCCATTGCTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR GCA 90 bp AATGTCCACTGCAACCTGCGTCTCCGAGGGAGTTCTGCAAGTTCATaGTTTCAGCCAACATCTTACAATAAGTCATGCTTCACGGGTATA +
Preference number: 1 (lower is better)
Translates to: NVHCNLRLRGSSASS*FQPTSYNKSCFTGI
Trigger: TATACCCGTGAAGCATGACTTATTGTAAGATGTTGGCTGAAAGCATGAACTTGCAGAACTCCCTCGGAGACGCAGGTTGCAGTGGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR GCA 90 bp CTCAAAATGAACAGCCACCAGTGCAGTGAGTGTTCTAAGTGTGTCTaGTGTATTATCCATCTGACCAAACCACCATCATACGTGCCGATG +
Preference number: 1 (lower is better)
Translates to: LKMNSHQCSECSKCV*CIIHLTKPPSYVPM
Trigger: CATCGGCACGTATGATGGTGGTTTGGTCAGATGGATAATACAGCAGACACACTTAGAACACTCACTGCACTGGTGGCTGTTCATTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR TCA 90 bp CTGTATTATCCATCTGACCAAACCACCATCATACGTGCCGATGTGTaGCATGAAATAACTGGATATTCCAACTCGATACCTGGCAGGGAT +
Preference number: 1 (lower is better)
Translates to: LYYPSDQTTIIRADV*HEITGYSNSIPGRD
Trigger: ATCCCTGCCAGGTATCGAGTTGGAATATCCAGTTATTTCATGTCACACATCGGCACGTATGATGGTGGTTTGGTCAGATGGATAATACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR TCA 90 bp TACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTaGGAGACACTACTGAAGAGGTTGCTGGTGACATCCCATGTTTAT +
Preference number: 1 (lower is better)
Translates to: YSFRNQRSSQHFPRG*ETLLKRLLVTSHVY
Trigger: ATAAACATGGGATGTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
3UTR GCA 90 bp TTCCTTGAATTGACTTTGGAGTTCCTCAAAATGAACAGCCACCAGTaGAGTGAGTGTTCTAAGTGTGTCTGCTGTATTATCCATCTGACC +
Preference number: 1 (lower is better)
Translates to: FLELTLEFLKMNSHQ*SECSKCVCCIIHLT
Trigger: GGTCAGATGGATAATACAGCAGACACACTTAGAACACTCACTGCACTGGTGGCTGTTCATTTTGAGGAACTCCAAAGTCAATTCAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR CCA 90 bp AGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTATTaGAATAAATCAATTGTTTCTAAGGCCTGTTCCAGGTCATTCCTT +
Preference number: 1 (lower is better)
Translates to: RCLSPRVGSQPVVNY*NKSIVSKACSRSFL
Trigger: AAGGAATGACCTGGAACAGGCCTTAGAAACAATTGATTTATTCCAATAGTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR GCA 90 bp CAAAAGGGAAACTGGCTTTCCTGCATTGTGTCAGCATTCTCATATTaGAAGATAAGTCTGGTTTGCCTGGAACAGTCCAGATTTAAGTTC +
Preference number: 1 (lower is better)
Translates to: QKGNWLSCIVSAFSY*KISLVCLEQSRFKF
Trigger: GAACTTAAATCTGGACTGTTCCAGGCAAACCAGACTTATCTTGCAATATGAGAATGCTGACACAATGCAGGAAAGCCAGTTTCCCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR CCA 90 bp ATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTaGTTAACTATTGGAATAAATCAATTGTTTCTAAGGCCTGTTCCA +
Preference number: 1 (lower is better)
Translates to: MSQLDAYHLELGASQ*LTIGINQLFLRPVP
Trigger: TGGAACAGGCCTTAGAAACAATTGATTTATTCCAATAGTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR TCA 90 bp TGTCCACTTTTAGAGTATATTCAAAGTCTGTCCAGTCATACCGCCTaGCAGAATGTTTCCTCCTGCATTCATATTATCCCTACAATTCTG +
Preference number: 1 (lower is better)
Translates to: CPLLEYIQSLSSHTA*QNVSSCIHIIPTIL
Trigger: CAGAATTGTAGGGATAATATGAATGCAGGAGGAAACATTCTGTCAGGCGGTATGACTGGACAGACTTTGAATATACTCTAAAAGTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR GCA 90 bp AGTTCTGCAAGTTCATGCTTTCAGCCAACATCTTACAATAAGTCATaGTTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCAC +
Preference number: 1 (lower is better)
Translates to: SSASSCFQPTSYNKS*FTGIVLKLTAMGNH
Trigger: GTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAAGCATGACTTATTGTAAGATGTTGGCTGAAAGCATGAACTTGCAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR TCA 90 bp TACAACATCCAAATTGCTATGTGTGTCCTGATGTTTGAAAAGTCCTaGGTAAGCTCTAATAAGAATTGCCTCAGGTACAAATGTCATTTC +
Preference number: 1 (lower is better)
Translates to: YNIQIAMCVLMFEKS*VSSNKNCLRYKCHF
Trigger: GAAATGACATTTGTACCTGAGGCAATTCTTATTAGAGCTTACTCAGGACTTTTCAAACATCAGGACACACATAGCAATTTGGATGTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR TCA 90 bp CCTGACAGAATGTTTCCTCCTGCATTCATATTATCCCTACAATTCTaGGTCCAGTTGAATAAAGTTAAGAATCAGGAGTTAACAATATGT +
Preference number: 1 (lower is better)
Translates to: PDRMFPPAFILSLQF*VQLNKVKNQELTIC
Trigger: ACATATTGTTAACTCCTGATTCTTAACTTTATTCAACTGGACTCAGAATTGTAGGGATAATATGAATGCAGGAGGAAACATTCTGTCAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAATGTCCACTGCAACCTaGGTCTCCGAGGGAGTTCTG +
Preference number: 2 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEMSTAT*VSEGVL
Trigger: CAGAACTCCCTCGGAGACGCAGGTTGCAGTGGACAT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATCCAGTCATACCGCCTaGCAGAATGTTTCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKESSHTA*QNVSSC
Trigger: GCAGGAGGAAACATTCTGTCAGGCGGTATGACTGGA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACACCAAACAGCAGTTCTaGAAAGGGTTCCAGTGGCTA +
Preference number: 2 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNTKQQF*KGFQWL
Trigger: TAGCCACTGGAACCCTTTCCAGAACTGCTGTTTGGT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR CAA 90 bp GGTACAAATGTCATTTCAGGACATCAGCTAACTGGAGTGATTTACTaGTCAAAAAGAGCACACAGGAAGGGATGGCAGTGGCCCCTTGGA +
Preference number: 2 (lower is better)
Translates to: GTNVISGHQLTGVIY*SKRAHRKGWQWPLG
Trigger: TCCAAGGGGCCACTGCCATCCCTTCCTGTGTGCTCTTTTTGACAAGTAAATCACTCCAGTTAGCTGATGTCCTGAAATGACATTTGTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR GCA 90 bp TTATCTCAGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGGAAAATAAAGTCCATTaGACCAGCCTTAGCCTGTTT +
Preference number: 2 (lower is better)
Translates to: LSQVLQVKMELQGWGGLVENKVH*TSLSLF
Trigger: AAACAGGCTAAGGCTGGTGCAATGGACTTTATTTTC...CACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCTGAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508365.5
3UTR-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACAGCTTTCAGCTTTCTaGTTCATGTCCAAAAATTGC +
Preference number: 2 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEQLSAF*FMSKNC
Trigger: GCAATTTTTGGACATGAACCAGAAAGCTGAAAGCTG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTACGTATTTGTTAACTaGCTCACTGAGACAGAATGC +
Preference number: 2 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNYVFVN*LTETEC
Trigger: GCATTCTGTCTCAGTGAGTCAGTTAACAAATACGTA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR TCA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACCAGTATTCCCCAAATTaGTCTATAGATTCAATCTCC +
Preference number: 2 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDQYSPN*SIDSIS
Trigger: GGAGATTGAATCTATAGATCAATTTGGGGAATACTG...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
3UTR-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAGTTCTGCAAGTTCATaGTTTCAGCCAACATCTTAC +
Preference number: 2 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNSSASS*FQPTSY
Trigger: GTAAGATGTTGGCTGAAAGCATGAACTTGCAGAACT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCTGGAAAGGGTTCCAGTaGCTACCAAGCGGTCCTTTG +
Preference number: 2 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSWKGFQ*LPSGPL
Trigger: CAAAGGACCGCTTGGTAGCCACTGGAACCCTTTCCA...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAAGAGTGTCCCAGTTTaGATGGTCAATTCTATGATC +
Preference number: 2 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNKSVPV*MVNSMI
Trigger: GATCATAGAATTGACCATCCAAACTGGGACACTCTT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAATCCCAATGTCCACTaGAACCTGCGTCTCCGAGGG +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWNPNVH*NLRLRG
Trigger: CCCTCGGAGACGCAGGTTGCAGTGGACATTGGGATT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR CAA 90 bp AAATTGCCCACCGAATTGACTAACATTCACATGAAAGTGGCAAAATaGAGGATGGAGAAGAACCAAACAGCAGTTCTGGAAAGGGTTCCA +
Preference number: 2 (lower is better)
Translates to: KLPTELTNIHMKVAK*RMEKNQTAVLERVP
Trigger: TGGAACCCTTTCCAGAACTGCTGTTTGGTTCTTCTCCATCCTCAATTTTGCCACTTTCATGTGAATGTTAGTCAATTCGGTGGGCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR CAA 90 bp ATGTATGATGGAGCCAGTGATCAGAATAATGTCATAGATCTGAAGTaGGTTGAGAGTCAAACAGAGAAAACCACCTCTGCCTGGCACATT +
Preference number: 2 (lower is better)
Translates to: MYDGASDQNNVIDLK*VESQTEKTTSAWHI
Trigger: AATGTGCCAGGCAGAGGTGGTTTTCTCTGTTTGACTCTCAACCAACTTCAGATCTATGACATTATTCTGATCACTGGCTCCATCATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTGGAAAGGGTTCCAGTaGCTACCAAGCGGTCCTTTG +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWWKGFQ*LPSGPL
Trigger: CAAAGGACCGCTTGGTAGCCACTGGAACCCTTTCCA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR CAA 90 bp TCAGCTTTCAGCTTTCTGGTTCATGTCCAAAAATTGCCCACCGAATaGACTAACATTCACATGAAAGTGGCAAAATTGAGGATGGAGAAG +
Preference number: 2 (lower is better)
Translates to: SAFSFLVHVQKLPTE*TNIHMKVAKLRMEK
Trigger: CTTCTCCATCCTCAATTTTGCCACTTTCATGTGAATGTTAGTCAATTCGGTGGGCAATTTTTGGACATGAACCAGAAAGCTGAAAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTCTCCGAGGGAGTTCTaGAAGTTCATGCTTTCAGCC +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWSPREF*KFMLSA
Trigger: GGCTGAAAGCATGAACTTGCAGAACTCCCTCGGAGA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGACCCCGATGGCTATTaGCTCACACATGTCTCAATT +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWDPDGY*LTHVSI
Trigger: AATTGAGACATGTGTGAGTCAATAGCCATCGGGGTC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGACCAAACAGCAGTTCTaGAAAGGGTTCCAGTGGCTA +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWTKQQF*KGFQWL
Trigger: TAGCCACTGGAACCCTTTCCAGAACTGCTGTTTGGT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CCA 90 bp CAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGATGTTACCATTCACATaGAAATTCAAGGACCCAGAA +
Preference number: 2 (lower is better)
Translates to: QFTPLETKEALNIFQGAEMLPFT*KFKDPE
Trigger: TTCTGGGTCCTTGAATTTCCATGTGAATGGTAACAT...CTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
3UTR-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTCCTTCGAATCCACCTaGACAAAAAGCACCTACAGT +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWSFEST*TKSTYS
Trigger: ACTGTAGGTGCTTTTTGTTCAGGTGGATTCGAAGGA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGCTGTATTATCCATCTaGCCAAACCACCATCATACG +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWAVLSI*PNHHHT
Trigger: CGTATGATGGTGGTTTGGTCAGATGGATAATACAGC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGTGTGTCCTGATGTTTaGAAAGTCCTGAGTAAGCTC +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWVCPDV*KVLSKL
Trigger: GAGCTTACTCAGGACTTTTCAAACATCAGGACACAC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CCA 90 bp TCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTATGTTACCATTCACATaGAAATTCAAGGACCCAGAA +
Preference number: 2 (lower is better)
Translates to: SQFTPLETKEALNIFQGAMLPFT*KFKDPE
Trigger: TTCTGGGTCCTTGAATTTCCATGTGAATGGTAACAT...AGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
3UTR-3UTR CCA 90 bp CAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGCTTCATATTGTTAAGTaGACAGTATTCCCCAAATTG +
Preference number: 2 (lower is better)
Translates to: QFTPLETKEALNIFQGAELHIVK*TVFPKL
Trigger: CAATTTGGGGAATACTGTCCACTTAACAATATGAAG...CTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
3UTR-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTTGCTATGTGTGTCCTaGTGTTTGAAAAGTCCTGAG +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWLLCVS*CLKSPE
Trigger: CTCAGGACTTTTCAAACATCAGGACACACATAGCAA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCAACAAAAGGGAAACTaGCTTTCCTGCATTGTGTCA +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWQQKGN*LSCIVS
Trigger: TGACACAATGCAGGAAAGCCAGTTTCCCTTTTGTTG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR CAA 90 bp AAGGAAGGAATAATAGTTTGGCTAACAATACTATATGAATGGCATTaGCTAAGTATCTCTAAACTCCTTTACTGCTTTGACCACCATGGG +
Preference number: 2 (lower is better)
Translates to: KEGIIVWLTILYEWH*LSISKLLYCFDHHG
Trigger: CCCATGGTGGTCAAAGCAGTAAAGGAGTTTAGAGATACTTAGCAAATGCCATTCATATAGTATTGTTAGCCAAACTATTATTCCTTCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTACGTATTTGTTAACTaGCTCACTGAGACAGAATGC +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWYVFVN*LTETEC
Trigger: GCATTCTGTCTCAGTGAGTCAGTTAACAAATACGTA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGCAGCTCTGAAGAGATaGTCTTTAAAAGGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWAALKR*SLKGRK
Trigger: TTTTCTCCCTTTTAAAGATCATCTCTTCAGAGCTGC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTCTAAACTCCTTTACTaGTTTGACCACCATGGGATA +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWSKLLY*FDHHGI
Trigger: TATCCCATGGTGGTCAAAGCAGTAAAGGAGTTTAGA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAAGAGTGTCCCAGTTTaGATGGTCAATTCTATGATC +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWKSVPV*MVNSMI
Trigger: GATCATAGAATTGACCATCCAAACTGGGACACTCTT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTTCAGCCCCTTTGCTTaGTCAAGTAGATCAACAAAA +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWFSPFA*SSRSTK
Trigger: TTTTGTTGATCTACTTGACCAAGCAAAGGGGCTGAA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTTGGGAGCCAGCCAGTaGTTAACTATTGGAATAAAT +
Preference number: 2 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWLGASQ*LTIGIN
Trigger: ATTTATTCCAATAGTTAACCACTGGCTGGCTCCCAA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR CAA 90 bp AGTTGTTTGCATTTCTCAGAACACACAGTCATTATGCTGATGGATTaGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGT +
Preference number: 2 (lower is better)
Translates to: SCLHFSEHTVIMLMD*VQSGYNCPIIKFYG
Trigger: ACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCATCAGCATAATGACTGTGTGTTCTGAGAAATGCAAACAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CCA 90 bp CAGTTCATCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCACTTCATATTGTTAAGTaGACAGTATTCCCCAAATTG +
Preference number: 2 (lower is better)
Translates to: QFISVYSFRNQRSSQHFPLHIVK*TVFPKL
Trigger: CAATTTGGGGAATACTGTCCACTTAACAATATGAAG...TGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGATGAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
3UTR CCA 72 bp TCTCAGGTTTTGCAAGTCAAGATGGAACTACAGGGTTaGGGAGGCCTCGTGTCTGTGGGTAGCTCCTATTGG +
Preference number: 3 (lower is better)
Translates to: SQVLQVKMELQG*GGLVSVGSSYW
Trigger: CCAATAGGAGCTACCCACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508365.5
3UTR-3UTR CAA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACTCTGCCTGGCACATTaGTGTATTGACTTCTGCAAT +
Preference number: 3 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKELCLAH*CIDFCN
Trigger: ATTGCAGAAGTCAATACACAAATGTGCCAGGCAGAG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CAA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAGTTCATGTCCAAAAATaGCCCACCGAATTGACTAAC +
Preference number: 3 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEVHVQK*PTELTN
Trigger: GTTAGTCAATTCGGTGGGCAATTTTTGGACATGAAC...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR TCA 72 bp ATGGGAAATCACATCTCTAACTCCTTCGAATCCACCTaGACAAAAAGCACCTACAGTCCGTGTCAGCCTCAG +
Preference number: 3 (lower is better)
Translates to: MGNHISNSFEST*TKSTYSPCQPQ
Trigger: CTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGATTCGAAGGAGTTAGAGATGTGATTTCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCAAGAGTGTCCCAGTTaGGATGGTCAATTCTATGAT +
Preference number: 3 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNQECPS*DGQFYD
Trigger: ATCATAGAATTGACCATCCAAACTGGGACACTCTTG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACACTGGCTTTCCTGCATaGTGTCAGCATTCTCATATT +
Preference number: 3 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNTGFPA*CQHSHI
Trigger: AATATGAGAATGCTGACACAATGCAGGAAAGCCAGT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAGTTTTTCAGCCCCTTaGCTTGGTCAAGTAGATCAA +
Preference number: 3 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNSFSAP*LGQVDQ
Trigger: TTGATCTACTTGACCAAGCAAAGGGGCTGAAAAACT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR GCA 72 bp AACAGCCACCAGTGCAGTGAGTGTTCTAAGTGTGTCTaGTGTATTATCCATCTGACCAAACCACCATCATAC +
Preference number: 3 (lower is better)
Translates to: NSHQCSECSKCV*CIIHLTKPPSY
Trigger: GTATGATGGTGGTTTGGTCAGATGGATAATACAGCAGACACACTTAGAACACTCACTGCACTGGTGGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CAA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAAAATTGCCCACCGAATaGACTAACATTCACATGAAA +
Preference number: 3 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEKLPTE*TNIHMK
Trigger: TTTCATGTGAATGTTAGTCAATTCGGTGGGCAATTT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGTCAGCATTCTCATATaGCAAGATAAGTCTGGTTTG +
Preference number: 3 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNVSILI*QDKSGL
Trigger: CAAACCAGACTTATCTTGCAATATGAGAATGCTGAC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGTTGCACATACGTATTaGTTAACTGACTCACTGAGA +
Preference number: 3 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNVAHTY*LTDSLR
Trigger: TCTCAGTGAGTCAGTTAACAAATACGTATGTGCAAC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR TCA 72 bp CCATCTGACCAAACCACCATCATACGTGCCGATGTGTaGCATGAAATAACTGGATATTCCAACTCGATACCT +
Preference number: 3 (lower is better)
Translates to: PSDQTTIIRADV*HEITGYSNSIP
Trigger: AGGTATCGAGTTGGAATATCCAGTTATTTCATGTCACACATCGGCACGTATGATGGTGGTTTGGTCAGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR GCA 72 bp AACTGGCTTTCCTGCATTGTGTCAGCATTCTCATATTaGAAGATAAGTCTGGTTTGCCTGGAACAGTCCAGA +
Preference number: 3 (lower is better)
Translates to: NWLSCIVSAFSY*KISLVCLEQSR
Trigger: TCTGGACTGTTCCAGGCAAACCAGACTTATCTTGCAATATGAGAATGCTGACACAATGCAGGAAAGCCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR GCA 72 bp GAATTTCCTATTGTGAAGTCAAGTTATCTCAGGTTTTaGAAGTCAAGATGGAACTACAGGGTTGGGGAGGCC +
Preference number: 3 (lower is better)
Translates to: EFPIVKSSYLRF*KSRWNYRVGEA
Trigger: GGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCTGAGATAACTTGACTTCACAATAGGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
3UTR-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTTCCTTGAATTGACTTaGGAGTTCCTCAAAATGAAC +
Preference number: 3 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNFLELT*EFLKMN
Trigger: GTTCATTTTGAGGAACTCCAAAGTCAATTCAAGGAA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR TCA 72 bp TTATTTCTTCTCACCAAAAAGGACCCCGATGGCTATTaGCTCACACATGTCTCAATTAGATGCCTATCACCT +
Preference number: 3 (lower is better)
Translates to: LFLLTKKDPDGY*LTHVSIRCLSP
Trigger: AGGTGATAGGCATCTAATTGAGACATGTGTGAGTCAATAGCCATCGGGGTCCTTTTTGGTGAGAAGAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGGACCCCGATGGCTATaGACTCACACATGTCTCAAT +
Preference number: 3 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWGPRWL*THTCLN
Trigger: ATTGAGACATGTGTGAGTCAATAGCCATCGGGGTCC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGTTCATGTCCAAAAATaGCCCACCGAATTGACTAAC +
Preference number: 3 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSVHVQK*PTELTN
Trigger: GTTAGTCAATTCGGTGGGCAATTTTTGGACATGAAC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR TCA 72 bp TTAGAGTATATTCAAAGTCTGTCCAGTCATACCGCCTaGCAGAATGTTTCCTCCTGCATTCATATTATCCCT +
Preference number: 3 (lower is better)
Translates to: LEYIQSLSSHTA*QNVSSCIHIIP
Trigger: AGGGATAATATGAATGCAGGAGGAAACATTCTGTCAGGCGGTATGACTGGACAGACTTTGAATATACTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR CCA 72 bp TTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTaGTTAACTATTGGAATAAATCAATTGTTTCTAAGG +
Preference number: 3 (lower is better)
Translates to: LDAYHLELGASQ*LTIGINQLFLR
Trigger: CCTTAGAAACAATTGATTTATTCCAATAGTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAACTCCTTTACTGCTTaGACCACCATGGGATACAGA +
Preference number: 3 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWNSFTA*TTMGYR
Trigger: TCTGTATCCCATGGTGGTCAAAGCAGTAAAGGAGTT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR TCA 72 bp GTTGTTTGCATTTCTCAGAACACACAGTCATTATGCTaGTGGATTTGGTTCAGTCAGGTTATAACTGTCCTA +
Preference number: 3 (lower is better)
Translates to: VVCISQNTQSLC*WIWFSQVITVL
Trigger: TAGGACAGTTATAACCTGACTGAACCAAATCCATCAGCATAATGACTGTGTGTTCTGAGAAATGCAAACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR GCA 72 bp GTGTCAGCATTCTCATATTGCAAGATAAGTCTGGTTTaGCTGGAACAGTCCAGATTTAAGTTCATTACAAGA +
Preference number: 3 (lower is better)
Translates to: VSAFSYCKISLV*LEQSRFKFITR
Trigger: TCTTGTAATGAACTTAAATCTGGACTGTTCCAGGCAAACCAGACTTATCTTGCAATATGAGAATGCTGACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCAAATTGCCCACCGAATaGACTAACATTCACATGAAA +
Preference number: 3 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSKLPTE*TNIHMK
Trigger: TTTCATGTGAATGTTAGTCAATTCGGTGGGCAATTT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCAAGAGTGTCCCAGTTaGGATGGTCAATTCTATGAT +
Preference number: 3 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWQECPS*DGQFYD
Trigger: ATCATAGAATTGACCATCCAAACTGGGACACTCTTG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR TCA 72 bp CAAATTGCTATGTGTGTCCTGATGTTTGAAAAGTCCTaGGTAAGCTCTAATAAGAATTGCCTCAGGTACAAA +
Preference number: 3 (lower is better)
Translates to: QIAMCVLMFEKS*VSSNKNCLRYK
Trigger: TTTGTACCTGAGGCAATTCTTATTAGAGCTTACTCAGGACTTTTCAAACATCAGGACACACATAGCAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR GCA 72 bp AGTTCATGCTTTCAGCCAACATCTTACAATAAGTCATaGTTCACGGGTATAGTTCTAAAACTAACAGCAATG +
Preference number: 3 (lower is better)
Translates to: SSCFQPTSYNKS*FTGIVLKLTAM
Trigger: CATTGCTGTTAGTTTTAGAACTATACCCGTGAAGCATGACTTATTGTAAGATGTTGGCTGAAAGCATGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGTTGCACATACGTATTaGTTAACTGACTCACTGAGA +
Preference number: 3 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWVAHTY*LTDSLR
Trigger: TCTCAGTGAGTCAGTTAACAAATACGTATGTGCAAC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR-3UTR CAA 90 bp CAGTTCATCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCATCTGAAGACTTCATATaGTTAAGTGGACAGTATTCC +
Preference number: 3 (lower is better)
Translates to: QFISVYSFRNQRSSQHFPSEDFI*LSGQYS
Trigger: GGAATACTGTCCACTTAACAATATGAAGTCTTCAGA...TGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGATGAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp TGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGGGTAGCTAGCGGCATTCCCCCGTaGCGTGGTCGCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: CKSRWNYRVGEASCLWVASGIPP*RGRRWL
Trigger: GAGCCACCTGCGACCACGTCACGGGGGAATGCCGCT...AGCTACCCACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR GCA 90 bp AGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGGGTAGCTCCTATTGGTCCCGCGCCATCCAGGTaGACACGTGCAGGTCCCGTC +
Preference number: 4 (lower is better)
Translates to: RWNYRVGEASCLWVAPIGPAPSR*TRAGPV
Trigger: GACGGGACCTGCACGTGTGCACCTGGATGGCGCGGG...ACCAATAGGAGCTACCCACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR CCA 90 bp CAGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGCACCATCGCAGGCACTaGAGCAGTTGGTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QVLQVKMELQGWGGLVSVHHRRH*SSWSLP
Trigger: GGGGAGGGACCAACTGCTCCAGTGCCTGCGATGGTG...CACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAGCGGCATTCCCCCGTaGCGTGGTCGCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNSGIPP*RGRRWL
Trigger: GAGCCACCTGCGACCACGTCACGGGGGAATGCCGCT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACTCAGGACACAGGCGTaGTTCGCAGCGCTCGCCAGC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKELRTQA*FAALAS
Trigger: GCTGGCGAGCGCTGCGAAGCACGCCTGTGTCCTGAG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCCCGCGCCATCCAGGTaGACACGTGCAGGTCCCGTC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNPAPSR*TRAGPV
Trigger: GACGGGACCTGCACGTGTGCACCTGGATGGCGCGGG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGGTGGCAGGGCCCGCTaGTGTGAACGCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNGGRAR*CERTVG
Trigger: GCCCACAGTGCGTTCACAGCAGCGGGCCCTGCCACC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTATCTCAGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGGGCTCCGGTGTATCCTaGTGGGCAGCGGCATTCCCC +
Preference number: 4 (lower is better)
Translates to: LSQVLQVKMELQGWGGLVGSGVS*WAAAFP
Trigger: GGGGAATGCCGCTGCCCACCAGGATACACCGGAGCC...CACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCTGAGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACAGTGGGGACCCCAGTaGTCACCATCGCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEQWGPQ*SPSQAL
Trigger: CAGTGCCTGCGATGGTGATCACTGGGGTCCCCACTG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTAGTGGCAAGCCCCGGTaGTGGGGTTGCACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFSGKPR*WGCTEP
Trigger: GGGCTCTGTGCAACCCCATCACCGGGGCTTGCCACT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCCCTCGGGGCAAGGCTaGCCACACACTGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNPSGQG*PHTVPI
Trigger: GATGGGCACAGTGTGTGGTCAGCCTTGCCCCGAGGG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGGGTAGCTAACACTTCCCTCCGTTaGCACACTGGCAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: CKSRWNYRVGEASCLWVANTSLR*HTGRSQ
Trigger: CTGAGACCTGCCAGTGTGTCAACGGAGGGAAGTGTT...AGCTACCCACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR TCA 90 bp CAGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGATTACAGTAGAGTCCTaGCCAGCCCGGCTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: QVLQVKMELQGWGGLVSVITVES*PARLAG
Trigger: GCCTGCAAGCCGGGCTGGTCAGGACTCTACTGTAAT...CACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR TCA 90 bp CAGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGTGCAGGCTCCCCCGTTaGGGCACTGGCATGTTAAGT +
Preference number: 4 (lower is better)
Translates to: QVLQVKMELQGWGGLVSVCRLPR*GTGMLS
Trigger: ACTTAACATGCCAGTGCCTCAACGGGGGAGCCTGCA...CACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATGCAGAGGGCGCCTGTaGAGCCAGGCAAGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKECRGRL*SQASSH
Trigger: GTGACTGCTTGCCTGGCTTCACAGGCGCCCTCTGCA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CAGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGACAGAGCCCCATTTTTaGACTGGCACCGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QVLQVKMELQGWGGLVSVTEPHF*TGTGWC
Trigger: GCACCAGCCGGTGCCAGTGCAAAAATGGGGCTCTGT...CACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR GCA 90 bp AAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTCTCAGGACACAGGCGTaGTTCGCAGCGCTCGCCAGC +
Preference number: 4 (lower is better)
Translates to: KLSTFSKGLRDTTEEVAGLRTQA*FAALAS
Trigger: GCTGGCGAGCGCTGCGAAGCACGCCTGTGTCCTGAG...ACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp AAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTCCCGCGCCATCCAGGTaGACACGTGCAGGTCCCGTC +
Preference number: 4 (lower is better)
Translates to: KKLSTFSKGLRDTTEEVAPAPSR*TRAGPV
Trigger: GACGGGACCTGCACGTGTGCACCTGGATGGCGCGGG...AGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACAGCCATCTGCGTGGCTaGAGTCGCAGCGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDSHLRG*SRSAQH
Trigger: GTGCTGAGCGCTGCGACTGCAGCCACGCAGATGGCT...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTAGGGTGGCAGCCATCTaGGTGGCTGCAGTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFRVAAI*VAAVAA
Trigger: CGCTGCGACTGCAGCCACGCAGATGGCTGCCACCCT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp AAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTAGGGTGGCAGCCATCTaGGTGGCTGCAGTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: KLSTFSKGLRDTTEEVAGRVAAI*VAAVAA
Trigger: CGCTGCGACTGCAGCCACGCAGATGGCTGCCACCCT...ACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACACCATCGCAGGCACTaGAGCAGTTGGTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEHHRRH*SSWSLP
Trigger: GGGGAGGGACCAACTGCTCCAGTGCCTGCGATGGTG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACTCCGGTGTATCCTGGTaGGCAGCGGCATTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDSGVSW*AAAFPR
Trigger: ACGGGGGAATGCCGCTGCCCACCAGGATACACCGGA...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGGCTCCGGTGTATCCTaGTGGGCAGCGGCATTCCCC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNGSGVS*WAAAFP
Trigger: GGGGAATGCCGCTGCCCACCAGGATACACCGGAGCC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp AAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTTGGCCCGTGGTAGGGTaGCAGCCATCTGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KLSTFSKGLRDTTEEVAGWPVVG*QPSAWL
Trigger: CAGCCACGCAGATGGCTGCCACCCTACCACGGGCCA...ACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTGGCCCGTGGTAGGGTaGCAGCCATCTGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNWPVVG*QPSAWL
Trigger: CAGCCACGCAGATGGCTGCCACCCTACCACGGGCCA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGGGAGGCAGCGGCAATaGCCCGTGGTAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PKKLSTFSKGLRDTTEEVGRQRQ*PVVGWQ
Trigger: CTGCCACCCTACCACGGGCCATTGCCGCTGCCTCCC...AACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCAGTGGGGACCCCAGTaGTCACCATCGCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNQWGPQ*SPSQAL
Trigger: CAGTGCCTGCGATGGTGATCACTGGGGTCCCCACTG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTAGTGGCAAGCCCCGGTaGTGGGGTTGCACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: PKKLSTFSKGLRDTTEEVSGKPR*WGCTEP
Trigger: GGGCTCTGTGCAACCCCATCACCGGGGCTTGCCACT...AACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp CCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACAGCGGCATTCCCCCGTaGCGTGGTCGCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PLETKEALNIFQGAERHYSGIPP*RGRRWL
Trigger: GAGCCACCTGCGACCACGTCACGGGGGAATGCCGCT...GTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp AGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGGGTAGCTCCTATTGGTTATCCTGGACTGCAATaGCATTGGCCTGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RWNYRVGEASCLWVAPIGYPGLQ*HWPVAA
Trigger: TGCTGCCACAGGCCAATGTCATTGCAGTCCAGGATA...ACCAATAGGAGCTACCCACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATGCCACTGGGACATCTaGTGGAGCAGTCCACCCCGT +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKECHWDI*WSSPPR
Trigger: ACGGGGTGGACTGCTCCATCAGATGTCCCAGTGGCA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTTGCAGAGGGCGCCTGTaGAGCCAGGCAAGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFCRGRL*SQASSH
Trigger: GTGACTGCTTGCCTGGCTTCACAGGCGCCCTCTGCA...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAGCTGACCACACACTGTaGCCATCCAGCCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEADHTL*PSSQKG
Trigger: GCCCTTCTGGCTGGATGGGCACAGTGTGTGGTCAGC...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTATCTCAGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGCTGACCAGCCCGGCTTaGAGGCACACTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: LSQVLQVKMELQGWGGLVLTSPA*RHTLQT
Trigger: TGTCTGGAGAGTGTGCCTGCAAGCCGGGCTGGTCAG...CACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCTGAGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR GCA 90 bp AGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGGGTAGCTCCTATTGGTATCCTGGGGCACAGGTaGACTTTCCAGTCACACTGT +
Preference number: 4 (lower is better)
Translates to: RWNYRVGEASCLWVAPIGILGHR*TFQSHC
Trigger: ACAGTGTGACTGGAAAGTGCACCTGTGCCCCAGGAT...ACCAATAGGAGCTACCCACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR GCA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACGAGCAGTCCACCCCGTaGCAGCCTGCCTTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDEQSTP*QPALQV
Trigger: TACTTGCAAGGCAGGCTGGCACGGGGTGGACTGCTC...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAATCCAGGTGCACACGTaGAGGTCCCGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEIQVHT*RSRPGC
Trigger: ACACCCTGGACGGGACCTGCACGTGTGCACCTGGAT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAGCCATCTGCGTGGCTaGAGTCGCAGCGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNSHLRG*SRSAQH
Trigger: GTGCTGAGCGCTGCGACTGCAGCCACGCAGATGGCT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTTCCGGTGTATCCTGGTaGGCAGCGGCATTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFSGVSW*AAAFPR
Trigger: ACGGGGGAATGCCGCTGCCCACCAGGATACACCGGA...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGGCTCCGGTGTATCCTaGTGGGCAGCGGCATTCCCC +
Preference number: 4 (lower is better)
Translates to: PKKLSTFSKGLRDTTEEVGSGVS*WAAAFP
Trigger: GGGGAATGCCGCTGCCCACCAGGATACACCGGAGCC...AACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp CCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTTGGCCCGTGGTAGGGTaGCAGCCATCTGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PKKLSTFSKGLRDTTEEVWPVVG*QPSAWL
Trigger: CAGCCACGCAGATGGCTGCCACCCTACCACGGGCCA...AACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACACACGCTGTCACAGTaGACACCTGACCATCCGGGG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEHTLSQ*TPDHPG
Trigger: CCCCGGATGGTCAGGTGTCCACTGTGACAGCGTGTG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGGTGCCTCGGAAGCCTaGTGCACACTCGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNGASEA*CTLADA
Trigger: GGCATCTGCGAGTGTGCACCAGGCTTCCGAGGCACC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAGCTGTGAACGCACTGTaGGCATGTCTGGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEAVNAL*ACLAAA
Trigger: CGCTGCAGCCAGACATGCCCACAGTGCGTTCACAGC...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAGCCCCAGTGGGCAGGTaGACATGGTTGAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEAPVGR*TWLRAV
Trigger: GACTGCTCTCAACCATGTCCACCTGCCCACTGGGGC...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCGTGTGGATGCAGTTTaGGCCCCAGTGGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFRVDAV*APVGRW
Trigger: CCACCTGCCCACTGGGGCCCAAACTGCATCCACACG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAAGGCTGTCCGATAGCTaGCTCTGTGCCGCGTGCATT +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKERLSDS*LCAACI
Trigger: AATGCACGCGGCACAGAGTCAGCTATCGGACAGCCT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTCAGTGGGGACCCCAGTaGTCACCATCGCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: PKKLSTFSKGLRDTTEEVQWGPQ*SPSQAL
Trigger: CAGTGCCTGCGATGGTGATCACTGGGGTCCCCACTG...AACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp CCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACAGTGGCAAGCCCCGGTaGTGGGGTTGCACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: PLETKEALNIFQGAERHYSGKPR*WGCTEP
Trigger: GGGCTCTGTGCAACCCCATCACCGGGGCTTGCCACT...GTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp CCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACCCCTCGGGGCAAGGCTaGCCACACACTGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: PLETKEALNIFQGAERHYPSGQG*PHTVPI
Trigger: GATGGGCACAGTGTGTGGTCAGCCTTGCCCCGAGGG...GTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp AAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTTGCCACTGGGACATCTaGTGGAGCAGTCCACCCCGT +
Preference number: 4 (lower is better)
Translates to: KLSTFSKGLRDTTEEVAGCHWDI*WSSPPR
Trigger: ACGGGGTGGACTGCTCCATCAGATGTCCCAGTGGCA...ACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACTGCAGGCTCCCCCGTTaGGGCACTGGCATGTTAAGT +
Preference number: 4 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDCRLPR*GTGMLS
Trigger: ACTTAACATGCCAGTGCCTCAACGGGGGAGCCTGCA...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGGGGAGCAGATCCTCTaGCAAGTGGTGCCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNGEQIL*QVVPRK
Trigger: CTTCCGAGGCACCACTTGTCAGAGGATCTGCTCCCC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACACAGTGCCGTCCCATaGATCCAGTGCGGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEHSAVP*IQCGKY
Trigger: GTACTTGCCGCACTGGATTCATGGGACGGCACTGTG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCTGACCAGCCCGGCTTaGAGGCACACTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNLTSPA*RHTLQT
Trigger: TGTCTGGAGAGTGTGCCTGCAAGCCGGGCTGGTCAG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACCGTGCCAGCCTGCCTTaGAAGTACAAGACCCGTCCA +
Preference number: 4 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDRASLP*KYKTRP
Trigger: TGGACGGGTCTTGTACTTGCAAGGCAGGCTGGCACG...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGAGCAGTCCACCCCGTaGCAGCCTGCCTTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFEQSTP*QPALQV
Trigger: TACTTGCAAGGCAGGCTGGCACGGGGTGGACTGCTC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGAGCAGTCCACCCCGTaGCAGCCTGCCTTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNEQSTP*QPALQV
Trigger: TACTTGCAAGGCAGGCTGGCACGGGGTGGACTGCTC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp AAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTATCCAGGTGCACACGTaGAGGTCCCGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: KLSTFSKGLRDTTEEVAGIQVHT*RSRPGC
Trigger: ACACCCTGGACGGGACCTGCACGTGTGCACCTGGAT...ACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATCCTCTGACAAGTGGTaGCTCGGAAGCCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKESSDKW*LGSLVH
Trigger: GTGCACCAGGCTTCCGAGGCACCACTTGTCAGAGGA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGCCCCATTTTTGCACTaGCACCGGCTGGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFAPFLH*HRLVQW
Trigger: CCACTGCACCAGCCGGTGCCAGTGCAAAAATGGGGC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp AAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGCCCCATTTTTGCACTaGCACCGGCTGGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KLSTFSKGLRDTTEEVAGAPFLH*HRLVQW
Trigger: CCACTGCACCAGCCGGTGCCAGTGCAAAAATGGGGC...ACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCATTCCCCCGTGACGTaGTCGCAGGTGGCTCCATTC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNHSPVT*SQVAPF
Trigger: GAATGGAGCCACCTGCGACCACGTCACGGGGGAATG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp AAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTCATTCCCCCGTGACGTaGTCGCAGGTGGCTCCATTC +
Preference number: 4 (lower is better)
Translates to: KLSTFSKGLRDTTEEVAGHSPVT*SQVAPF
Trigger: GAATGGAGCCACCTGCGACCACGTCACGGGGGAATG...ACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGCTGTGAACGCACTGTaGGCATGTCTGGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNAVNAL*ACLAAA
Trigger: CGCTGCAGCCAGACATGCCCACAGTGCGTTCACAGC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGCCCCAGTGGGCAGGTaGACATGGTTGAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFAPVGR*TWLRAV
Trigger: GACTGCTCTCAACCATGTCCACCTGCCCACTGGGGC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGCACACAGGAAGGGATaGCAGTGGCCCCTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFAHRKG*QWPLGV
Trigger: GACTCCAAGGGGCCACTGCCATCCCTTCCTGTGTGC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp AGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGGGAGGCCTCGTGTCTGTaGGTAGCTCCTATTGGTAGA +
Preference number: 4 (lower is better)
Translates to: RFCKSRWNYRVGEASCLWEASCL*VAPIGR
Trigger: TCTACCAATAGGAGCTACCCACAGACACGAGGCCTC...CCACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAGGCTGTCCGATAGCTaGCTCTGTGCCGCGTGCATT +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNRLSDS*LCAACI
Trigger: AATGCACGCGGCACAGAGTCAGCTATCGGACAGCCT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp AGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGGAAGAGCATTCTCCAGTaGCGTGATGACACACTCCTC +
Preference number: 4 (lower is better)
Translates to: RFCKSRWNYRVGEASCLWKSILQ*RDDTLL
Trigger: GAGGAGTGTGTCATCACGTCACTGGAGAATGCTCTT...CCACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTATTACAGTAGAGTCCTaGCCAGCCCGGCTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFITVES*PARLAG
Trigger: GCCTGCAAGCCGGGCTGGTCAGGACTCTACTGTAAT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTGCAGGCTCCCCCGTTaGGGCACTGGCATGTTAAGT +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNCRLPR*GTGMLS
Trigger: ACTTAACATGCCAGTGCCTCAACGGGGGAGCCTGCA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAGCAGGTGGACATGGTTaGGAGCAGTCACTGCCAATC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEAGGHG*EQSLPI
Trigger: GATTGGCAGTGACTGCTCTCAACCATGTCCACCTGC...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAATGTGGCACACTGGGTaGGCGTGTGGTAACTGGGAT +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEMWHTG*ACGNWD
Trigger: ATCCCAGTTACCACACGCTCACCCAGTGTGCCACAT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTCCCTGTTGTTGACGTaGGGGGATGTGGCACACTGG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNSLLLT*GDVAHW
Trigger: CCAGTGTGCCACATCCCCTCACGTCAACAACAGGGA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTTCCTGTCCCTGTTGTTaGCGTGAGGGGATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFSCPCC*REGMWH
Trigger: GTGCCACATCCCCTCACGTCAACAACAGGGACAGGA...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTCCTGTCCCTGTTGTTaGCGTGAGGGGATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNSCPCC*REGMWH
Trigger: GTGCCACATCCCCTCACGTCAACAACAGGGACAGGA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTAAGCACCGAGCTCGTTaGGGTAGCCGCCATGTTTCC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFKHRAR*GSRHVS
Trigger: GGAAACATGGCGGCTACCTCAACGAGCTCGGTGCTT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAAGCACCGAGCTCGTTaGGGTAGCCGCCATGTTTCC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNKHRAR*GSRHVS
Trigger: GGAAACATGGCGGCTACCTCAACGAGCTCGGTGCTT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTACAGAGCCCCATTTTTaGACTGGCACCGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFTEPHF*TGTGWC
Trigger: GCACCAGCCGGTGCCAGTGCAAAAATGGGGCTCTGT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAAGTCGTTACCATAGGTaGCCTGCTCACAGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKESRYHR*PAHSGP
Trigger: AGGACCGCTGTGAGCAGGGCACCTATGGTAACGACT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTATCTCAGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGAGTCGTTACCATAGGTaGCCTGCTCACAGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: LSQVLQVKMELQGWGGLVSRYHR*PAHSGP
Trigger: AGGACCGCTGTGAGCAGGGCACCTATGGTAACGACT...CACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCTGAGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATGCTTCACAGAGGCATaGGCCGCTCACGTGGTAACA +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKECFTEA*AAHVVT
Trigger: TGTTACCACGTGAGCGGCGCATGCCTCTGTGAAGCA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp AAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTCTGACCAGCCCGGCTTaGAGGCACACTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: KKLSTFSKGLRDTTEEVALTSPA*RHTLQT
Trigger: TGTCTGGAGAGTGTGCCTGCAAGCCGGGCTGGTCAG...AGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp AAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTCGTGCCAGCCTGCCTTaGAAGTACAAGACCCGTCCA +
Preference number: 4 (lower is better)
Translates to: KLSTFSKGLRDTTEEVAGRASLP*KYKTRP
Trigger: TGGACGGGTCTTGTACTTGCAAGGCAGGCTGGCACG...ACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTCCTCTGACAAGTGGTaGCTCGGAAGCCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNSSDKW*LGSLVH
Trigger: GTGCACCAGGCTTCCGAGGCACCACTTGTCAGAGGA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACCCCATCGTAGGCGCTaGAGAAAGCTCCATTATGGC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEPHRRR*RKLHYG
Trigger: GCCATAATGGAGCTTTCTGCAGCGCCTACGATGGGG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAGAGGACATCTCTGAGTaGAGTAGAGCCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEEDISE*SRALSS
Trigger: GCTGGACAGGGCTCTACTGCACTCAGAGATGTCCTC...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCCTGAAGGGCACTTCTaGTCACAGTGCCGTCCCATG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNPEGHF*SQCRPM
Trigger: CATGGGACGGCACTGTGAGCAGAAGTGCCCTTCAGG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAAATCCCAATGTCCACTaGAACCTGCGTCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKENPNVH*NLRLRG
Trigger: CCCTCGGAGACGCAGGTTGCAGTGGACATTGGGATT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp AGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGGTTCCCCTGTGTATCCTaGACTGCAATGACATTGGCC +
Preference number: 4 (lower is better)
Translates to: RFCKSRWNYRVGEASCLWFPCVS*TAMTLA
Trigger: GGCCAATGTCATTGCAGTCCAGGATACACAGGGGAA...CCACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR CCA 90 bp CAGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGCACACTCTCCAGACATaGGGTGACAGCTATGAGTGT +
Preference number: 4 (lower is better)
Translates to: QVLQVKMELQGWGGLVSVHTLQT*GDSYEC
Trigger: ACACTCATAGCTGTCACCCCATGTCTGGAGAGTGTG...CACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACAGTCTGCCCCATTTTaGCAGCTGCAGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEQSAPF*QLQICW
Trigger: CCAGCAGATCTGCAGCTGCCAAAATGGGGCAGACTG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAAGATCCTCTGACAAGTaGTGCCTCGGAAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKERSSDK*CLGSLV
Trigger: CACCAGGCTTCCGAGGCACCACTTGTCAGAGGATCT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACCAGGTCCAGAGATCTTaGGAATCGCAGCGCAACCTT +
Preference number: 4 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDQVQRS*ESQRNL
Trigger: AAGGTTGCGCTGCGATTCTCAAGATCTCTGGACCTG...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACAGGTCCAGAGATCTTaGGAATCGCAGCGCAACCTT +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEQVQRS*ESQRNL
Trigger: AAGGTTGCGCTGCGATTCTCAAGATCTCTGGACCTG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACCTCTTGCACAGTCACTaGGTAGCTTTCCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDLLHSH*VAFPVA
Trigger: AGCCACTGGGAAAGCTACTCAGTGACTGTGCAAGAG...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACTCTTGCACAGTCACTaGGTAGCTTTCCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKELLHSH*VAFPVA
Trigger: AGCCACTGGGAAAGCTACTCAGTGACTGTGCAAGAG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACCAGCCAGGCTCACACTaGCAGGTGTTTGGAGCAATA +
Preference number: 4 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDQPGSH*QVFGAI
Trigger: TATTGCTCCAAACACCTGTCAGTGTGAGCCTGGCTG...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACAGCCAGGCTCACACTaGCAGGTGTTTGGAGCAATA +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEQPGSH*QVFGAI
Trigger: TATTGCTCCAAACACCTGTCAGTGTGAGCCTGGCTG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCAGCGGCATTCCCCCGTaGCGTGGTCGCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSSGIPP*RGRRWL
Trigger: GAGCCACCTGCGACCACGTCACGGGGGAATGCCGCT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTAACACTTCCCTCCGTTaGCACACTGGCAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFNTSLR*HTGRSQ
Trigger: CTGAGACCTGCCAGTGTGTCAACGGAGGGAAGTGTT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAACACTTCCCTCCGTTaGCACACTGGCAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNNTSLR*HTGRSQ
Trigger: CTGAGACCTGCCAGTGTGTCAACGGAGGGAAGTGTT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAACCGTTTGTCACATTTaGTGCCGTAGAGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKETVCHI*CRRAPQ
Trigger: CTGAGGGGCTCTACGGCATCAAATGTGACAAACGGT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAGTAACAGGTCCCAGTaGTGTGGTCGCAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNSNRSQ*CGRRWS
Trigger: ACTCCACCTGCGACCACATCACTGGGACCTGTTACT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTTTGCTTAGGGGAGGATaGACTGTCTCGGACTGGCAG +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFLLRGG*TVSDWQ
Trigger: CTGCCAGTCCGAGACAGTTCATCCTCCCCTAAGCAA...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp AAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTAGTCGTTACCATAGGTaGCCTGCTCACAGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: KLSTFSKGLRDTTEEVAGSRYHR*PAHSGP
Trigger: AGGACCGCTGTGAGCAGGGCACCTATGGTAACGACT...ACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTTGCTTCACAGAGGCATaGGCCGCTCACGTGGTAACA +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFCFTEA*AAHVVT
Trigger: TGTTACCACGTGAGCGGCGCATGCCTCTGTGAAGCA...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTGGTAGAAAATAAAGTCCATTGCACCAGCCTTAGCCTGTTTCCCAAGGTAGCTATCCAGGTGCACACGTaGAGGTCCCGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LVENKVHCTSLSLFPKVAIQVHT*RSRPGC
Trigger: ACACCCTGGACGGGACCTGCACGTGTGCACCTGGAT...AGCTACCTTGGGAAACAGGCTAAGGCTGGTGCAATGGACTTTATTTTCTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAGTTCAGCCCGTACGTaGCATCCTGGCAGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNSSART*HPGREV
Trigger: AACTTCCCTGCCAGGATGGCACGTACGGGCTGAACT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTAGTTCAGCCCGTACGTaGCATCCTGGCAGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFSSART*HPGREV
Trigger: AACTTCCCTGCCAGGATGGCACGTACGGGCTGAACT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGCCATCTGCGTGGCTaGAGTCGCAGCGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: QFTPLETKEALNIFQGAESHLRG*SRSAQH
Trigger: GTGCTGAGCGCTGCGACTGCAGCCACGCAGATGGCT...CTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGGTGGCAGGGCCCGCTaGTGTGAACGCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSGGRAR*CERTVG
Trigger: GCCCACAGTGCGTTCACAGCAGCGGGCCCTGCCACC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCCCCATCGTAGGCGCTaGAGAAAGCTCCATTATGGC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNPHRRR*RKLHYG
Trigger: GCCATAATGGAGCTTTCTGCAGCGCCTACGATGGGG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGAGGACATCTCTGAGTaGAGTAGAGCCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFEDISE*SRALSS
Trigger: GCTGGACAGGGCTCTACTGCACTCAGAGATGTCCTC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACACTTCTGCTCACAGTaGCGTCCCATGAATCCAGTG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEHFCSQ*RPMNPV
Trigger: CACTGGATTCATGGGACGGCACTGTGAGCAGAAGTG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATGGGGAATCTCTTCGTaGCGGCGATTTCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEWGISS*RRFHLH
Trigger: GTGGAGATGAAATCGCCGGCACGAAGAGATTCCCCA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACCACCACTGTCCTCTTaGTTAGGGGAGGATGAACTG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEPPLSS*LGEDEL
Trigger: CAGTTCATCCTCCCCTAAGCAAGAGGACAGTGGTGG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGGTGTCATTCACTGCTaGTGCTGCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNGVIHC*CCCCCC
Trigger: GCAGCAGCAACAGCAGCAGCAGCAGTGAATGACACC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTATGTCCACTGCAACCTaGGTCTCCGAGGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFMSTAT*VSEGVL
Trigger: CAGAACTCCCTCGGAGACGCAGGTTGCAGTGGACAT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACATGTCCACTGCAACCTaGGTCTCCGAGGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNMSTAT*VSEGVL
Trigger: CAGAACTCCCTCGGAGACGCAGGTTGCAGTGGACAT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACGCCCCATTTTTGCACTaGCACCGGCTGGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PLETKEALNIFQGAERHYAPFLH*HRLVQW
Trigger: CCACTGCACCAGCCGGTGCCAGTGCAAAAATGGGGC...GTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp TTGGTAGAAAATAAAGTCCATTGCACCAGCCTTAGCCTGTTTCCCAAGGTAGCTCATTCCCCCGTGACGTaGTCGCAGGTGGCTCCATTC +
Preference number: 4 (lower is better)
Translates to: LVENKVHCTSLSLFPKVAHSPVT*SQVAPF
Trigger: GAATGGAGCCACCTGCGACCACGTCACGGGGGAATG...AGCTACCTTGGGAAACAGGCTAAGGCTGGTGCAATGGACTTTATTTTCTACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR CCA 90 bp AGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGGAATTCCTTTGAATCCTaGGGCACAGGTGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: RFCKSRWNYRVGEASCLWNSFES*GTGALS
Trigger: GGAAAGTGCACCTGTGCCCCAGGATTCAAAGGAATT...CCACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCCGTACGTGCCATCCTaGCAGGGAAGTTCGCATTTC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNPYVPS*QGSSHF
Trigger: GAAATGCGAACTTCCCTGCCAGGATGGCACGTACGG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGGGAGGCAGCGGCAATaGCCCGTGGTAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSGRQRQ*PVVGWQ
Trigger: CTGCCACCCTACCACGGGCCATTGCCGCTGCCTCCC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCTCTTGCACAGTCACTaGGTAGCTTTCCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFLLHSH*VAFPVA
Trigger: AGCCACTGGGAAAGCTACTCAGTGACTGTGCAAGAG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTTATCCTGGACTGCAATaGCATTGGCCTGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFYPGLQ*HWPVAA
Trigger: TGCTGCCACAGGCCAATGTCATTGCAGTCCAGGATA...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTACCGTTTGTCACATTTaGTGCCGTAGAGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFTVCHI*CRRAPQ
Trigger: CTGAGGGGCTCTACGGCATCAAATGTGACAAACGGT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTAGCAGTCAATTCCTTTaGATCCTGGGGCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFSSQFL*ILGHRC
Trigger: GCACCTGTGCCCCAGGATTCAAAGGAATTGACTGCT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGTCACAGTGGACACCTaGCCATCCGGGGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSVTVDT*PSGEAA
Trigger: CGCTGCCTCCCCGGATGGTCAGGTGTCCACTGTGAC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCAGGGCCCGCTGCTGTaGACGCACTGTGGGCATGTC +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSQGPLL*THCGHV
Trigger: GACATGCCCACAGTGCGTTCACAGCAGCGGGCCCTG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTCCAGTCATACCGCCTaGCAGAATGTTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNSSHTA*QNVSSC
Trigger: GCAGGAGGAAACATTCTGTCAGGCGGTATGACTGGA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCTCAGGACACAGGCGTaGTTCGCAGCGCTCGCCAGC +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSLRTQA*FAALAS
Trigger: GCTGGCGAGCGCTGCGAAGCACGCCTGTGTCCTGAG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCCCCATTTTGGCAGCTaGAGATCTGCTGGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFPHFGS*RSAGKL
Trigger: AAGCTTGCCAGCAGATCTGCAGCTGCCAAAATGGGG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCACACTGTCACAGTCTaGCCCATTTTGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFHTVTV*PILAAA
Trigger: TGCAGCTGCCAAAATGGGGCAGACTGTGACAGTGTG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTATCCTGGGGCACAGGTaGACTTTCCAGTCACACTGT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFILGHR*TFQSHC
Trigger: ACAGTGTGACTGGAAAGTGCACCTGTGCCCCAGGAT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp AAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTATCCTGGGGCACAGGTaGACTTTCCAGTCACACTGT +
Preference number: 4 (lower is better)
Translates to: KLSTFSKGLRDTTEEVAGILGHR*TFQSHC
Trigger: ACAGTGTGACTGGAAAGTGCACCTGTGCCCCAGGAT...ACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACATCCTGGGGCACAGGTaGACTTTCCAGTCACACTGT +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNILGHR*TFQSHC
Trigger: ACAGTGTGACTGGAAAGTGCACCTGTGCCCCAGGAT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCAGGGTGGCAGCCATCTaGGTGGCTGCAGTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSRVAAI*VAAVAA
Trigger: CGCTGCGACTGCAGCCACGCAGATGGCTGCCACCCT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGTGGGCATGTCTGGCTaGAGCGATGCCCATAAAAAC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFVGMSG*SDAHKN
Trigger: GTTTTTATGGGCATCGCTGCAGCCAGACATGCCCAC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACTGTCCAGCCAGGAGTaGATTTACATTCCCCATCGT +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKELSSQE*IYIPHR
Trigger: ACGATGGGGAATGTAAATGCACTCCTGGCTGGACAG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCCGGCAATGTCCCAGTaGAGTCCCCCACAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSPAMSQ*SPPQGL
Trigger: GAGGCCCTGTGGGGGACTGCACTGGGACATTGCCGG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCCACCACTGTCCTCTTaGTTAGGGGAGGATGAACTG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNPPLSS*LGEDEL
Trigger: CAGTTCATCCTCCCCTAAGCAAGAGGACAGTGGTGG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACATTCACTGCTGCTGCTaGTGTTGCTGCTGCTACCAC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNIHCCC*CCCCYH
Trigger: GTGGTAGCAGCAGCAACAGCAGCAGCAGCAGTGAAT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTATTCACTGCTGCTGCTaGTGTTGCTGCTGCTACCAC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFIHCCC*CCCCYH
Trigger: GTGGTAGCAGCAGCAACAGCAGCAGCAGCAGTGAAT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGTCATTCACTGCTGCTaGTGCTGTTGCTGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFVIHCC*CCCCCY
Trigger: GTAGCAGCAGCAACAGCAGCAGCAGCAGTGAATGAC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATTTGGTGTCATTCACTaGTGCTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEFGVIH*CCCCCC
Trigger: GCAGCAACAGCAGCAGCAGCAGTGAATGACACCAAA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATCTCCGAGGGAGTTCTaGAAGTTCATGCTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKESPREF*KFMLSA
Trigger: GGCTGAAAGCATGAACTTGCAGAACTCCCTCGGAGA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CTACTGAAGAGGTTGCTGGTGACATCCCATGTTTATGAATCTGAAGACTTCATACACCATCGCAGGCACTaGAGCAGTTGGTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LLKRLLVTSHVYESEDFIHHRRH*SSWSLP
Trigger: GGGGAGGGACCAACTGCTCCAGTGCCTGCGATGGTG...TATGAAGTCTTCAGATTCATAAACATGGGATGTCACCAGCAACCTCTTCAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATCTCTGCTCACACTGTaGACCATGTTTACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKESLLTL*TMFTRR
Trigger: CCTCCTGGTAAACATGGTCCACAGTGTGAGCAGAGA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACACGTCCCTCCATTATaGCACTGGCATTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEHVPPL*HWHSWE
Trigger: TTCCCAAGAATGCCAGTGCCATAATGGAGGGACGTG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAATGACATTGGCCTGTaGCAGCATCACACGTCCCTC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNNDIGL*QHHTSL
Trigger: GAGGGACGTGTGATGCTGCCACAGGCCAATGTCATT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACTTCCCCTGTGTATCCTaGACTGCAATGACATTGGCC +
Preference number: 4 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDFPCVS*TAMTLA
Trigger: GGCCAATGTCATTGCAGTCCAGGATACACAGGGGAA...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACACAGGACACTCATCCTaGCACCGTTCCCCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNTGHSS*HRSPVY
Trigger: ATACACAGGGGAACGGTGCCAGGATGAGTGTCCTGT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTCAGTCTGCCCCATTTTaGCAGCTGCAGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PKKLSTFSKGLRDTTEEVQSAPF*QLQICW
Trigger: CCAGCAGATCTGCAGCTGCCAAAATGGGGCAGACTG...AACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp GTAGAAAATAAAGTCCATTGCACCAGCCTTAGCCTGTTTCCCAAGGTAGCTCTCCAGTCTGCCCCATTTTaGCAGCTGCAGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VENKVHCTSLSLFPKVALQSAPF*QLQICW
Trigger: CCAGCAGATCTGCAGCTGCCAAAATGGGGCAGACTG...GAGAGCTACCTTGGGAAACAGGCTAAGGCTGGTGCAATGGACTTTATTTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR CCA 90 bp CCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTCCGTACGTGCCATCCTaGCAGGGAAGTTCGCATTTC +
Preference number: 4 (lower is better)
Translates to: PKKLSTFSKGLRDTTEEVPYVPS*QGSSHF
Trigger: GAAATGCGAACTTCCCTGCCAGGATGGCACGTACGG...AACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp CAGTTCATCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAGGGAGGCAGCGGCAATaGCCCGTGGTAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QFISVYSFRNQRSSQHFPGRQRQ*PVVGWQ
Trigger: CTGCCACCCTACCACGGGCCATTGCCGCTGCCTCCC...TGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGATGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCACTGCCCAGAAATGTaGTCGCAGTCAGCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFHCPEM*SQSAPF
Trigger: AAACGGAGCTGACTGCGACCACATTTCTGGGCAGTG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTGGAAAGGGTTCCAGTaGCTACCAAGCGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNWKGFQ*LPSGPL
Trigger: CAAAGGACCGCTTGGTAGCCACTGGAACCCTTTCCA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTTGGAAAGGGTTCCAGTaGCTACCAAGCGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFWKGFQ*LPSGPL
Trigger: CAAAGGACCGCTTGGTAGCCACTGGAACCCTTTCCA...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATTCAAGATTCAGAGGTaGTGCTGTCCCAATCCAGTG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEFKIQR*CCPNPV
Trigger: CACTGGATTGGGACAGCATCACCTCTGAATCTTGAA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGGCTGTCCGATAGCTaGCTCTGTGCCGCGTGCATT +
Preference number: 4 (lower is better)
Translates to: QFTPLETKEALNIFQGAERLSDS*LCAACI
Trigger: AATGCACGCGGCACAGAGTCAGCTATCGGACAGCCT...CTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCACACTCCTCCATTTTaGCAAGGGCATCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNHTPPF*QGHLCS
Trigger: TGAGCAGAGATGCCCTTGTCAAAATGGAGGAGTGTG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAAGAGCATTCTCCAGTaGCGTGATGACACACTCCTC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNKSILQ*RDDTLL
Trigger: GAGGAGTGTGTCATCACGTCACTGGAGAATGCTCTT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTTGGAGTTCCTCAAAATaGACAGCCACCAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFWSSSK*TATSAV
Trigger: CACTGCACTGGTGGCTGTTCATTTTGAGGAACTCCA...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGCTTCACAGAGGCATaGGCCGCTCACGTGGTAACA +
Preference number: 4 (lower is better)
Translates to: PLETKEALNIFQGAERHYCFTEA*AAHVVT
Trigger: TGTTACCACGTGAGCGGCGCATGCCTCTGTGAAGCA...GTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp GTAGAAAATAAAGTCCATTGCACCAGCCTTAGCCTGTTTCCCAAGGTAGCTCTCCCCCATTTTGGCAGCTaGAGATCTGCTGGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: VENKVHCTSLSLFPKVALPHFGS*RSAGKL
Trigger: AAGCTTGCCAGCAGATCTGCAGCTGCCAAAATGGGG...GAGAGCTACCTTGGGAAACAGGCTAAGGCTGGTGCAATGGACTTTATTTTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCCCGCGCCATCCAGGTaGACACGTGCAGGTCCCGTC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWPAPSR*TRAGPV
Trigger: GACGGGACCTGCACGTGTGCACCTGGATGGCGCGGG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CAGTTCATCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGTGGCAGCCATCTaGGTGGCTGCAGTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: QFISVYSFRNQRSSQHFPRVAAI*VAAVAA
Trigger: CGCTGCGACTGCAGCCACGCAGATGGCTGCCACCCT...TGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGATGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACTCCATTATGGCAGTTaGACGTGTGGATGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKELHYGS*TCGCSL
Trigger: CAAACTGCATCCACACGTGCAACTGCCATAATGGAG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAAAGAATGATGATGCCTaGAATGGCCCCGATCTGGTA +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEKNDDA*NGPDLV
Trigger: TACCAGATCGGGGCCATTGCAGGCATCATCATTCTT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTTTTGGTGTCATTCACTaGTGCTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFFGVIH*CCCCCC
Trigger: GCAGCAACAGCAGCAGCAGCAGTGAATGACACCAAA...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATCTCAGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCGCAATACAGCGACCATaGACACATTTATCAGCACAG +
Preference number: 4 (lower is better)
Translates to: ISGFASQDGTTGLGRPRVAIQRP*THLSAQ
Trigger: CTGTGCTGATAAATGTGTCCATGGTCGCTGTATTGC...GACACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCACCATCGCAGGCACTaGAGCAGTTGGTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSHHRRH*SSWSLP
Trigger: GGGGAGGGACCAACTGCTCCAGTGCCTGCGATGGTG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTCTCTGCTCACACTGTaGACCATGTTTACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNSLLTL*TMFTRR
Trigger: CCTCCTGGTAAACATGGTCCACAGTGTGAGCAGAGA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp AAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTTCTCTGCTCACACTGTaGACCATGTTTACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KLSTFSKGLRDTTEEVAGSLLTL*TMFTRR
Trigger: CCTCCTGGTAAACATGGTCCACAGTGTGAGCAGAGA...ACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp AAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTAATGACATTGGCCTGTaGCAGCATCACACGTCCCTC +
Preference number: 4 (lower is better)
Translates to: KKLSTFSKGLRDTTEEVANDIGL*QHHTSL
Trigger: GAGGGACGTGTGATGCTGCCACAGGCCAATGTCATT...AGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTTTCCCCTGTGTATCCTaGACTGCAATGACATTGGCC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFFPCVS*TAMTLA
Trigger: GGCCAATGTCATTGCAGTCCAGGATACACAGGGGAA...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTACAGGACACTCATCCTaGCACCGTTCCCCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: PKKLSTFSKGLRDTTEEVTGHSS*HRSPVY
Trigger: ATACACAGGGGAACGGTGCCAGGATGAGTGTCCTGT...AACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGGGAGGCAGCGGCAATaGCCCGTGGTAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWGRQRQ*PVVGWQ
Trigger: CTGCCACCCTACCACGGGCCATTGCCGCTGCCTCCC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATCCCAAATCTGCCACTaGGACACACTTCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKESQICH*DTLHCR
Trigger: TCTGCAATGAAGTGTGTCCCAGTGGCAGATTTGGGA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCAGGGAGAGCAGTACTaGTTCGGCTTAAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNQGEQY*FGLSCS
Trigger: TGAACAGCTTAAGCCGAACCAGTACTGCTCTCCCTG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCAGGGAGAGCAGTACTaGTTCGGCTTAAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFQGEQY*FGLSCS
Trigger: TGAACAGCTTAAGCCGAACCAGTACTGCTCTCCCTG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAACCAAACAGCAGTTCTaGAAAGGGTTCCAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKETKQQF*KGFQWL
Trigger: TAGCCACTGGAACCCTTTCCAGAACTGCTGTTTGGT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTGGTAGAAAATAAAGTCCATTGCACCAGCCTTAGCCTGTTTCCCAAGGTAGCTATGGAACTACAGGGTTaGGGAGGCCTCGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LVENKVHCTSLSLFPKVAMELQG*GGLVSV
Trigger: CACAGACACGAGGCCTCCCCAACCCTGTAGTTCCAT...AGCTACCTTGGGAAACAGGCTAAGGCTGGTGCAATGGACTTTATTTTCTACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGAAGAACAACCTCTCTaGAATCCGCTTGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFEEQPL*NPLASP
Trigger: AGGAGAAGCAAGCGGATTTCAGAGAGGTTGTTCTTC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274473.6
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTTCAAGATTCAGAGGTaGTGCTGTCCCAATCCAGTG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNFKIQR*CCPNPV
Trigger: CACTGGATTGGGACAGCATCACCTCTGAATCTTGAA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACCAGCCAGGCTCACACTaGCAGGTGTTTGGAGCAATA +
Preference number: 4 (lower is better)
Translates to: PLETKEALNIFQGAERHYQPGSH*QVFGAI
Trigger: TATTGCTCCAAACACCTGTCAGTGTGAGCCTGGCTG...GTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAGTGGCAAGCCCCGGTaGTGGGGTTGCACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWSGKPR*WGCTEP
Trigger: GGGCTCTGTGCAACCCCATCACCGGGGCTTGCCACT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTCACACTCCTCCATTTTaGCAAGGGCATCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PKKLSTFSKGLRDTTEEVHTPPF*QGHLCS
Trigger: TGAGCAGAGATGCCCTTGTCAAAATGGAGGAGTGTG...AACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCCCTCGGGGCAAGGCTaGCCACACACTGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWPSGQG*PHTVPI
Trigger: GATGGGCACAGTGTGTGGTCAGCCTTGCCCCGAGGG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTATCCTGGACTGCAATaGCATTGGCCTGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PLETKEALNIFQGAERHYYPGLQ*HWPVAA
Trigger: TGCTGCCACAGGCCAATGTCATTGCAGTCCAGGATA...GTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp CAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAACACTTCCCTCCGTTaGCACACTGGCAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: QFTPLETKEALNIFQGAENTSLR*HTGRSQ
Trigger: CTGAGACCTGCCAGTGTGTCAACGGAGGGAAGTGTT...CTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp TTGGTAGAAAATAAAGTCCATTGCACCAGCCTTAGCCTGTTTCCCAAGGTAGCTAGCAGTCAATTCCTTTaGATCCTGGGGCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: LVENKVHCTSLSLFPKVASSQFL*ILGHRC
Trigger: GCACCTGTGCCCCAGGATTCAAAGGAATTGACTGCT...AGCTACCTTGGGAAACAGGCTAAGGCTGGTGCAATGGACTTTATTTTCTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGTCACAGTGGACACCTaGCCATCCGGGGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWVTVDT*PSGEAA
Trigger: CGCTGCCTCCCCGGATGGTCAGGTGTCCACTGTGAC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCAGTCAGCTCCGTTTTaGCATTGGCATATCAGTGCA +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFQSAPF*HWHISA
Trigger: TGCACTGATATGCCAATGTCAAAACGGAGCTGACTG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTATAGCCATATGTTCCTaGAGGGCACTTCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFIAICS*RALLLT
Trigger: TGTGAGCAGAAGTGCCCTTCAGGAACATATGGCTAT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTTTCCACCATTGCTGTaGGGAAGGGTTCCTGAAATG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNFPPLL*GRVPEM
Trigger: CATTTCAGGAACCCTTCCTCACAGCAATGGTGGAAA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGACGCCCATTATTGCTaGATACTCCTTGGACAACAC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFDAHYC*ILLGQH
Trigger: GTGTTGTCCAAGGAGTATTCAGCAATAATGGGCGTC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATCCTTCGAATCCACCTaGACAAAAAGCACCTACAGT +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKESFEST*TKSTYS
Trigger: ACTGTAGGTGCTTTTTGTTCAGGTGGATTCGAAGGA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGACCCCGATGGCTATTaGCTCACACATGTCTCAATT +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNDPDGY*LTHVSI
Trigger: AATTGAGACATGTGTGAGTCAATAGCCATCGGGGTC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGACCCCGATGGCTATTaGCTCACACATGTCTCAATT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFDPDGY*LTHVSI
Trigger: AATTGAGACATGTGTGAGTCAATAGCCATCGGGGTC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGCTGACCACACACTGTaGCCATCCAGCCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSADHTL*PSSQKG
Trigger: GCCCTTCTGGCTGGATGGGCACAGTGTGTGGTCAGC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp AAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTCTGTGTATCCTGGACTaGAATGACATTGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: KKLSTFSKGLRDTTEEVALCILD*NDIGLW
Trigger: CCACAGGCCAATGTCATTGCAGTCCAGGATACACAG...AGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp CAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGTGCTTCACAGAGGCATaGGCCGCTCACGTGGTAACA +
Preference number: 4 (lower is better)
Translates to: QFTPLETKEALNIFQGAECFTEA*AAHVVT
Trigger: TGTTACCACGTGAGCGGCGCATGCCTCTGTGAAGCA...CTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp GTGGAAATTAACATATTGATGTTACCATTCACATGGAAATTCAAGGACCCAGAACTCAGGACACAGGCGTaGTTCGCAGCGCTCGCCAGC +
Preference number: 4 (lower is better)
Translates to: VEINILMLPFTWKFKDPELRTQA*FAALAS
Trigger: GCTGGCGAGCGCTGCGAAGCACGCCTGTGTCCTGAG...TTCTGGGTCCTTGAATTTCCATGTGAATGGTAACATCAATATGTTAATTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCTGACCAGCCCGGCTTaGAGGCACACTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSLTSPA*RHTLQT
Trigger: TGTCTGGAGAGTGTGCCTGCAAGCCGGGCTGGTCAG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTGGTAGAAAATAAAGTCCATTGCACCAGCCTTAGCCTGTTTCCCAAGGTAGCTCACACTGTCACAGTCTaGCCCATTTTGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LVENKVHCTSLSLFPKVAHTVTV*PILAAA
Trigger: TGCAGCTGCCAAAATGGGGCAGACTGTGACAGTGTG...AGCTACCTTGGGAAACAGGCTAAGGCTGGTGCAATGGACTTTATTTTCTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR GCA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACCACAGGAGAGCAGACTaGATCATTTTTACAGCCACA +
Preference number: 4 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDHRRAD*IIFTAT
Trigger: TGTGGCTGTAAAAATGATGCAGTCTGCTCTCCTGTG...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAGGTTCCGTTGTTGGTaGAGGTACAAATTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNRFRCW*RYKFLH
Trigger: GTGCAGGAATTTGTACCTGCACCAACAACGGAACCT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCTCCATTATGGCAGTTaGACGTGTGGATGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNLHYGS*TCGCSL
Trigger: CAAACTGCATCCACACGTGCAACTGCCATAATGGAG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCCGGCAATGTCCCAGTaGAGTCCCCCACAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWPAMSQ*SPPQGL
Trigger: GAGGCCCTGTGGGGGACTGCACTGGGACATTGCCGG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAATGAACAGCCACCAGTaGAGTGAGTGTTCTAAGTGT +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEMNSHQ*SECSKC
Trigger: ACACTTAGAACACTCACTGCACTGGTGGCTGTTCAT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAGCAATACAGCGACCATaGACACATTTATCAGCACAG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEAIQRP*THLSAQ
Trigger: CTGTGCTGATAAATGTGTCCATGGTCGCTGTATTGC...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGCCCCATTTTTGCACTaGCACCGGCTGGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSAPFLH*HRLVQW
Trigger: CCACTGCACCAGCCGGTGCCAGTGCAAAAATGGGGC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATGGCACTGGCATTCTTaGGAACAGTTCTTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEWHWHS*EQFFPK
Trigger: CTTTGGAAAGAACTGTTCCCAAGAATGCCAGTGCCA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCCTCCATTATGGCACTaGCATTCTTGGGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNPPLWH*HSWEQF
Trigger: GAACTGTTCCCAAGAATGCCAGTGCCATAATGGAGG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp AAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTCCTCCATTATGGCACTaGCATTCTTGGGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: KLSTFSKGLRDTTEEVAGPPLWH*HSWEQF
Trigger: GAACTGTTCCCAAGAATGCCAGTGCCATAATGGAGG...ACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp CCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACAATGACATTGGCCTGTaGCAGCATCACACGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PLETKEALNIFQGAERHYNDIGL*QHHTSL
Trigger: GAGGGACGTGTGATGCTGCCACAGGCCAATGTCATT...GTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAATTCCTTTGAATCCTaGGGCACAGGTGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNNSFES*GTGALS
Trigger: GGAAAGTGCACCTGTGCCCCAGGATTCAAAGGAATT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTGGCCCGTGGTAGGGTaGCAGCCATCTGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWWPVVG*QPSAWL
Trigger: CAGCCACGCAGATGGCTGCCACCCTACCACGGGCCA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATACAGGTTCCGTTGTTaGTGCAGGTACAAATTCCTG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEYRFRC*CRYKFL
Trigger: CAGGAATTTGTACCTGCACCAACAACGGAACCTGTA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCAGAAAGCTCCATTATaGCAGTTGCACGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNQKAPL*QLHVWM
Trigger: CATCCACACGTGCAACTGCCATAATGGAGCTTTCTG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTAGGTCATATGGATCCTaGGAGAGACGCCCATTATTG +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFRSYGS*ERRPLL
Trigger: CAATAATGGGCGTCTCTCCCAGGATCCATATGACCT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGCACACAGGAAGGGATaGCAGTGGCCCCTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSAHRKG*QWPLGV
Trigger: GACTCCAAGGGGCCACTGCCATCCCTTCCTGTGTGC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCACAGTGCCGTCCCATaGATCCAGTGCGGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSHSAVP*IQCGKY
Trigger: GTACTTGCCGCACTGGATTCATGGGACGGCACTGTG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTTCCTTCGAATCCACCTaGACAAAAAGCACCTACAGT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFSFEST*TKSTYS
Trigger: ACTGTAGGTGCTTTTTGTTCAGGTGGATTCGAAGGA...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGCTGTATTATCCATCTaGCCAAACCACCATCATACG +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFAVLSI*PNHHHT
Trigger: CGTATGATGGTGGTTTGGTCAGATGGATAATACAGC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGCTGTATTATCCATCTaGCCAAACCACCATCATACG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNAVLSI*PNHHHT
Trigger: CGTATGATGGTGGTTTGGTCAGATGGATAATACAGC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGTGTGTCCTGATGTTTaGAAAGTCCTGAGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFVCPDV*KVLSKL
Trigger: GAGCTTACTCAGGACTTTTCAAACATCAGGACACAC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATTGCTATGTGTGTCCTaGTGTTTGAAAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKELLCVS*CLKSPE
Trigger: CTCAGGACTTTTCAAACATCAGGACACACATAGCAA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAACACAGTCATTATGCTaGTGGATTTGGTTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKETQSLC*WIWFSQ
Trigger: CTGACTGAACCAAATCCATCAGCATAATGACTGTGT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TCCCATGTTTATGAATCTGAAGACTTCATATTGTTAAGTGGACAGTATTCCCCAGCTGACCACACACTGTaGCCATCCAGCCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SHVYESEDFILLSGQYSPADHTL*PSSQKG
Trigger: GCCCTTCTGGCTGGATGGGCACAGTGTGTGGTCAGC...TGGGGAATACTGTCCACTTAACAATATGAAGTCTTCAGATTCATAAACATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp CCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACCTGTGTATCCTGGACTaGAATGACATTGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PLETKEALNIFQGAERHYLCILD*NDIGLW
Trigger: CCACAGGCCAATGTCATTGCAGTCCAGGATACACAG...GTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCACAGGAGAGCAGACTaGATCATTTTTACAGCCACA +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFHRRAD*IIFTAT
Trigger: TGTGGCTGTAAAAATGATGCAGTCTGCTCTCCTGTG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCGTGCCAGCCTGCCTTaGAAGTACAAGACCCGTCCA +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSRASLP*KYKTRP
Trigger: TGGACGGGTCTTGTACTTGCAAGGCAGGCTGGCACG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CAGTTCATCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAGAGCAGTCCACCCCGTaGCAGCCTGCCTTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: QFISVYSFRNQRSSQHFPEQSTP*QPALQV
Trigger: TACTTGCAAGGCAGGCTGGCACGGGGTGGACTGCTC...TGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGATGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp CTACTGAAGAGGTTGCTGGTGACATCCCATGTTTATGAATCTGAAGACTTCATAAGTTCAGCCCGTACGTaGCATCCTGGCAGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LLKRLLVTSHVYESEDFISSART*HPGREV
Trigger: AACTTCCCTGCCAGGATGGCACGTACGGGCTGAACT...TATGAAGTCTTCAGATTCATAAACATGGGATGTCACCAGCAACCTCTTCAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAGCCATCTGCGTGGCTaGAGTCGCAGCGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWSHLRG*SRSAQH
Trigger: GTGCTGAGCGCTGCGACTGCAGCCACGCAGATGGCT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACATGGGTTCTCAGAACTaGTTAGGGAGCAGTTACTTG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNMGSQN*LGSSYL
Trigger: CAAGTAACTGCTCCCTAAGCAGTTCTGAGAACCCAT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACATGAACAGCCACCAGTaGAGTGAGTGTTCTAAGTGT +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNMNSHQ*SECSKC
Trigger: ACACTTAGAACACTCACTGCACTGGTGGCTGTTCAT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCACCGGGAAAGTACTTaGTGCAAACTTGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNHREST*CKLEQG
Trigger: ACCTTGTTCAAGTTTGCAGCAAGTACTTTCCCGGTG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503335.7
CDS-3UTR CCA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACGAAGAAAGCAATCTTTaGGAGTCTTCTTTCAGGCGT +
Preference number: 4 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDEESNL*ESSFRR
Trigger: ACGCCTGAAAGAAGACTCCCAAAGATTGCTTTCTTC...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTCCGGTGTATCCTGGTaGGCAGCGGCATTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWSGVSW*AAAFPR
Trigger: ACGGGGGAATGCCGCTGCCCACCAGGATACACCGGA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp GTGGAAATTAACATATTGATGTTACCATTCACATGGAAATTCAAGGACCCAGAATCCGGTGTATCCTGGTaGGCAGCGGCATTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: VEINILMLPFTWKFKDPESGVSW*AAAFPR
Trigger: ACGGGGGAATGCCGCTGCCCACCAGGATACACCGGA...TTCTGGGTCCTTGAATTTCCATGTGAATGGTAACATCAATATGTTAATTTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp AAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTTGGCACTGGCATTCTTaGGAACAGTTCTTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: KLSTFSKGLRDTTEEVAGWHWHS*EQFFPK
Trigger: CTTTGGAAAGAACTGTTCCCAAGAATGCCAGTGCCA...ACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGGTGCCTCGGAAGCCTaGTGCACACTCGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWGASEA*CTLADA
Trigger: GGCATCTGCGAGTGTGCACCAGGCTTCCGAGGCACC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTACAGGTTCCGTTGTTaGTGCAGGTACAAATTCCTG +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNYRFRC*CRYKFL
Trigger: CAGGAATTTGTACCTGCACCAACAACGGAACCTGTA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGACAAGATCTGTCAATaGGGTTACAGGTTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFDKICQ*GYRFRC
Trigger: ACAACGGAACCTGTAACCCCATTGACAGATCTTGTC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCGTGTGGATGCAGTTTaGGCCCCAGTGGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWRVDAV*APVGRW
Trigger: CCACCTGCCCACTGGGGCCCAAACTGCATCCACACG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCTGGCAGTTGCACGTGTaGATGCAGTTTGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSWQLHV*MQFGPQ
Trigger: CTGGGGCCCAAACTGCATCCACACGTGCAACTGCCA...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGATGTGACTGTTCTTTaGGAGGTCATATGGATCCTG +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFDVTVL*EVIWIL
Trigger: CAGGATCCATATGACCTCCCAAAGAACAGTCACATC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCAAAAAGGACCCCGATaGCTATTGACTCACACATGT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFQKGPR*LLTHTC
Trigger: ACATGTGTGAGTCAATAGCCATCGGGGTCCTTTTTG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TCCCATGTTTATGAATCTGAAGACTTCATATTGTTAAGTGGACAGTATTCCCCAAGGCTGTCCGATAGCTaGCTCTGTGCCGCGTGCATT +
Preference number: 4 (lower is better)
Translates to: SHVYESEDFILLSGQYSPRLSDS*LCAACI
Trigger: AATGCACGCGGCACAGAGTCAGCTATCGGACAGCCT...TGGGGAATACTGTCCACTTAACAATATGAAGTCTTCAGATTCATAAACATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp TCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTACCGTTTGTCACATTTaGTGCCGTAGAGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SQFTPLETKEALNIFQGATVCHI*CRRAPQ
Trigger: CTGAGGGGCTCTACGGCATCAAATGTGACAAACGGT...AGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp TCCCATGTTTATGAATCTGAAGACTTCATATTGTTAAGTGGACAGTATTCCCCAATTACAGTAGAGTCCTaGCCAGCCCGGCTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SHVYESEDFILLSGQYSPITVES*PARLAG
Trigger: GCCTGCAAGCCGGGCTGGTCAGGACTCTACTGTAAT...TGGGGAATACTGTCCACTTAACAATATGAAGTCTTCAGATTCATAAACATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp TCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTAGCAGTCAATTCCTTTaGATCCTGGGGCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: SQFTPLETKEALNIFQGASSQFL*ILGHRC
Trigger: GCACCTGTGCCCCAGGATTCAAAGGAATTGACTGCT...AGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTGCCACTGGGACATCTaGTGGAGCAGTCCACCCCGT +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWCHWDI*WSSPPR
Trigger: ACGGGGTGGACTGCTCCATCAGATGTCCCAGTGGCA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp GTGGAAATTAACATATTGATGTTACCATTCACATGGAAATTCAAGGACCCAGAATGCCACTGGGACATCTaGTGGAGCAGTCCACCCCGT +
Preference number: 4 (lower is better)
Translates to: VEINILMLPFTWKFKDPECHWDI*WSSPPR
Trigger: ACGGGGTGGACTGCTCCATCAGATGTCCCAGTGGCA...TTCTGGGTCCTTGAATTTCCATGTGAATGGTAACATCAATATGTTAATTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGCAGGTGGACATGGTTaGGAGCAGTCACTGCCAATC +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSAGGHG*EQSLPI
Trigger: GATTGGCAGTGACTGCTCTCAACCATGTCCACCTGC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGTGAGGAAGGGTTCCTaGAATGGTATAATCTGCATT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFVRKGS*NGIICI
Trigger: AATGCAGATTATACCATTTCAGGAACCCTTCCTCAC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCATGTGGCACACTGGGTaGGCGTGTGGTAACTGGGAT +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSMWHTG*ACGNWD
Trigger: ATCCCAGTTACCACACGCTCACCCAGTGTGCCACAT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCTTGCTTAGGGGAGGATaGACTGTCTCGGACTGGCAG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSLLRGG*TVSDWQ
Trigger: CTGCCAGTCCGAGACAGTTCATCCTCCCCTAAGCAA...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATACGTATTTGTTAACTaGCTCACTGAGACAGAATGC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEYVFVN*LTETEC
Trigger: GCATTCTGTCTCAGTGAGTCAGTTAACAAATACGTA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAATACGTGCCGATGTGTaGCATGAAATAACTGGATAT +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEIRADV*HEITGY
Trigger: ATATCCAGTTATTTCATGTCACACATCGGCACGTAT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCTTTGGGGGTCAAGATaGCCACACTTTCATAAAGTT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFLWGSR*PHFHKV
Trigger: AACTTTATGAAAGTGTGGTCATCTTGACCCCCAAAG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGCATGTACACTTTCATaGTGTGAAGCCTTTAAGACC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFACTLS*CEAFKT
Trigger: GGTCTTAAAGGCTTCACATCATGAAAGTGTACATGC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATCTCTGAAATCCGCTTaGTTCTCCTTCTTTAATGGA +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKESLKSA*FSFFNG
Trigger: TCCATTAAAGAAGGAGAAGCAAGCGGATTTCAGAGA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274473.6
CDS-3UTR GCA 90 bp TTTCCACCTTGCTTCTTTGTGGAAATTAACATATTGATGTTACCATTCACATGGGCTGACCACACACTGTaGCCATCCAGCCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: FPPCFFVEINILMLPFTWADHTL*PSSQKG
Trigger: GCCCTTCTGGCTGGATGGGCACAGTGTGTGGTCAGC...CCATGTGAATGGTAACATCAATATGTTAATTTCCACAAAGAAGCAAGGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp TCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTCACACTGTCACAGTCTaGCCCATTTTGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SQFTPLETKEALNIFQGAHTVTV*PILAAA
Trigger: TGCAGCTGCCAAAATGGGGCAGACTGTGACAGTGTG...AGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAGCAGGTACAAATTCCTaGACAGTTTTTCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEAGTNS*TVFPKS
Trigger: AGATTTGGGAAAAACTGTGCAGGAATTTGTACCTGC...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGTGCGGCAAGTACACTaGCCAGAAATGTGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSVRQVH*PEMWSQ
Trigger: CTGCGACCACATTTCTGGGCAGTGTACTTGCCGCAC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTAGAGAAAACCACCTCTaGCTGGCACATTTGTGTATT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFRENHL*LAHLCI
Trigger: AATACACAAATGTGCCAGGCAGAGGTGGTTTTCTCT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAGAGAAAACCACCTCTaGCTGGCACATTTGTGTATT +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNRENHL*LAHLCI
Trigger: AATACACAAATGTGCCAGGCAGAGGTGGTTTTCTCT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAAAGATAAGTCTGGTTTaGCTGGAACAGTCCAGATTT +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEKISLV*LEQSRF
Trigger: AAATCTGGACTGTTCCAGGCAAACCAGACTTATCTT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATGTTCTAAGTGTGTCTaGTGTATTATCCATCTGACC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKECSKCV*CIIHLT
Trigger: GGTCAGATGGATAATACAGCAGACACACTTAGAACA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCATGTCTCAATTAGATaGCTATCACCTAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFHVSIR*LSPRVG
Trigger: CCCAACTCTAGGTGATAGGCATCTAATTGAGACATG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATCTAAACTCCTTTACTaGTTTGACCACCATGGGATA +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKESKLLY*FDHHGI
Trigger: TATCCCATGGTGGTCAAAGCAGTAAAGGAGTTTAGA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCCAGTCGCCCAGTTTTaGGCACCGGGAAAGTACTTG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSPVAQF*APGKYL
Trigger: CAAGTACTTTCCCGGTGCGCAAAACTGGGCGACTGG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503335.7
CDS-3UTR GCA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACGAAAATAAAGTCCATTaGACCAGCCTTAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDENKVH*TSLSLF
Trigger: AAACAGGCTAAGGCTGGTGCAATGGACTTTATTTTC...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGAAGAAAGCAATCTTTaGGAGTCTTCTTTCAGGCGT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFEESNL*ESSFRR
Trigger: ACGCCTGAAAGAAGACTCCCAAAGATTGCTTTCTTC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCAATACAGCGACCATaGACACATTTATCAGCACAG +
Preference number: 4 (lower is better)
Translates to: PKKLSTFSKGLRDTTEEVAIQRP*THLSAQ
Trigger: CTGTGCTGATAAATGTGTCCATGGTCGCTGTATTGC...AACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCATTCCCCCGTGACGTaGTCGCAGGTGGCTCCATTC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWHSPVT*SQVAPF
Trigger: GAATGGAGCCACCTGCGACCACGTCACGGGGGAATG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCAGTCTGCCCCATTTTaGCAGCTGCAGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSQSAPF*QLQICW
Trigger: CCAGCAGATCTGCAGCTGCCAAAATGGGGCAGACTG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCACACGCTGTCACAGTaGACACCTGACCATCCGGGG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWHTLSQ*TPDHPG
Trigger: CCCCGGATGGTCAGGTGTCCACTGTGACAGCGTGTG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCAGATCCTCTGACAAGTaGTGCCTCGGAAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSRSSDK*CLGSLV
Trigger: CACCAGGCTTCCGAGGCACCACTTGTCAGAGGATCT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCGGGATAAGTACAGGTaGGTCTTTAATAGTGGCATA +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFRDKYR*VFNSGI
Trigger: TATGCCACTATTAAAGACCCACCTGTACTTATCCCG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTTTGCTGAATACTCCTTaGACAACACTCACTGTAGGT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFLLNTP*TTLTVG
Trigger: ACCTACAGTGAGTGTTGTCCAAGGAGTATTCAGCAA...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCAGGTCCAGAGATCTTaGGAATCGCAGCGCAACCTT +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSQVQRS*ESQRNL
Trigger: AAGGTTGCGCTGCGATTCTCAAGATCTCTGGACCTG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGTTCAAGATTCAGAGGTaGTGCTGTCCCAATCCAGTG +
Preference number: 4 (lower is better)
Translates to: QFTPLETKEALNIFQGAEFKIQR*CCPNPV
Trigger: CACTGGATTGGGACAGCATCACCTCTGAATCTTGAA...CTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCAGCCAGGCTCACACTaGCAGGTGTTTGGAGCAATA +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSQPGSH*QVFGAI
Trigger: TATTGCTCCAAACACCTGTCAGTGTGAGCCTGGCTG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTGCAGGCTCCCCCGTTaGGGCACTGGCATGTTAAGT +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWCRLPR*GTGMLS
Trigger: ACTTAACATGCCAGTGCCTCAACGGGGGAGCCTGCA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTCCCTGTTGTTGACGTaGGGGGATGTGGCACACTGG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWSLLLT*GDVAHW
Trigger: CCAGTGTGCCACATCCCCTCACGTCAACAACAGGGA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGGCACATTTGTGTATTaGCTTCTGCAATACTTCCTA +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFGTFVY*LLQYFL
Trigger: TAGGAAGTATTGCAGAAGTCAATACACAAATGTGCC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGCAGCTCTGAAGAGATaGTCTTTAAAAGGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNAALKR*SLKGRK
Trigger: TTTTCTCCCTTTTAAAGATCATCTCTTCAGAGCTGC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATCAGTCATATCAAAATaGAGCCTAGACCAAATACTG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKESVISK*SLDQIL
Trigger: CAGTATTTGGTCTAGGCTTCATTTTGATATGACTGA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTTCCACCTTGCTTCTTTGTGGAAATTAACATATTGATGTTACCATTCACATGGACAGAGCCCCATTTTTaGACTGGCACCGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FPPCFFVEINILMLPFTWTEPHF*TGTGWC
Trigger: GCACCAGCCGGTGCCAGTGCAAAAATGGGGCTCTGT...CCATGTGAATGGTAACATCAATATGTTAATTTCCACAAAGAAGCAAGGTGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGACAGAGCCCCATTTTTaGACTGGCACCGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWTEPHF*TGTGWC
Trigger: GCACCAGCCGGTGCCAGTGCAAAAATGGGGCTCTGT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCCCCATTTTGGCAGCTaGAGATCTGCTGGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSPHFGS*RSAGKL
Trigger: AAGCTTGCCAGCAGATCTGCAGCTGCCAAAATGGGG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCACACTGTCACAGTCTaGCCCATTTTGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSHTVTV*PILAAA
Trigger: TGCAGCTGCCAAAATGGGGCAGACTGTGACAGTGTG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TCCCATGTTTATGAATCTGAAGACTTCATATTGTTAAGTGGACAGTATTCCCCAAGTTCAGCCCGTACGTaGCATCCTGGCAGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: SHVYESEDFILLSGQYSPSSART*HPGREV
Trigger: AACTTCCCTGCCAGGATGGCACGTACGGGCTGAACT...TGGGGAATACTGTCCACTTAACAATATGAAGTCTTCAGATTCATAAACATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGCAGGTACAAATTCCTaGACAGTTTTTCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFAGTNS*TVFPKS
Trigger: AGATTTGGGAAAAACTGTGCAGGAATTTGTACCTGC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAGTTGCACGTGTGGATaGAGTTTGGGCCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWSCTCG*SLGPSG
Trigger: CCCACTGGGGCCCAAACTGCATCCACACGTGCAACT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCACTTCTGCTCACAGTaGCGTCCCATGAATCCAGTG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSHFCSQ*RPMNPV
Trigger: CACTGGATTCATGGGACGGCACTGTGAGCAGAAGTG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCTGCTGCTGTTGCTGCTaGTACCACCACTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSCCCCC*YHHCPL
Trigger: AAGAGGACAGTGGTGGTAGCAGCAGCAACAGCAGCA...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTAGTTCTGCAAGTTCATaGTTTCAGCCAACATCTTAC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFSSASS*FQPTSY
Trigger: GTAAGATGTTGGCTGAAAGCATGAACTTGCAGAACT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATCAGCATTCTCATATTaGAAGATAAGTCTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKESAFSY*KISLVC
Trigger: GCAAACCAGACTTATCTTGCAATATGAGAATGCTGA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCTCACTGAGACAGAATaGCATATAGGATTTCATGTC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFLTETE*HIGFHV
Trigger: GACATGAAATCCTATATGGCATTCTGTCTCAGTGAG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTTCTAAACTCCTTTACTaGTTTGACCACCATGGGATA +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFSKLLY*FDHHGI
Trigger: TATCCCATGGTGGTCAAAGCAGTAAAGGAGTTTAGA...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAACACGTAATTCACACTTaGATATGCATGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEHVIHT*ICMYTF
Trigger: GAAAGTGTACATGCATATGCAAGTGTGAATTACGTG...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCGGGAAAGTACTTGCTaGAAACTTGAACAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNRESTC*KLEQGF
Trigger: AAAACCTTGTTCAAGTTTGCAGCAAGTACTTTCCCG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503335.7
CDS-3UTR CCA 90 bp CTACTGAAGAGGTTGCTGGTGACATCCCATGTTTATGAATCTGAAGACTTCATATCTCTGCTCACACTGTaGACCATGTTTACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLKRLLVTSHVYESEDFISLLTL*TMFTRR
Trigger: CCTCCTGGTAAACATGGTCCACAGTGTGAGCAGAGA...TATGAAGTCTTCAGATTCATAAACATGGGATGTCACCAGCAACCTCTTCAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCAATGACATTGGCCTGTaGCAGCATCACACGTCCCTC +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSNDIGL*QHHTSL
Trigger: GAGGGACGTGTGATGCTGCCACAGGCCAATGTCATT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTCACACTCTCCAGACATaGGGTGACAGCTATGAGTGT +
Preference number: 4 (lower is better)
Translates to: SQFTPLETKEALNIFQGAHTLQT*GDSYEC
Trigger: ACACTCATAGCTGTCACCCCATGTCTGGAGAGTGTG...AGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGTGGGCAGGTGGACATaGTTGAGAGCAGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWVGRWT*LRAVTA
Trigger: GGCAGTGACTGCTCTCAACCATGTCCACCTGCCCAC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCACTGCCCAGAAATGTaGTCGCAGTCAGCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSHCPEM*SQSAPF
Trigger: AAACGGAGCTGACTGCGACCACATTTCTGGGCAGTG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCTGCTCCCCTTCTCCCTaGTTTAACCAAGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSCSPSP*FNQGSA
Trigger: TGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATTTAAGATGAGTCTGTaGTACTCATCAGTAACAACG +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEFKMSL*YSSVTT
Trigger: CGTTGTTACTGATGAGTACCACAGACTCATCTTAAA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTAAGAGTGTCCCAGTTTaGATGGTCAATTCTATGATC +
Preference number: 4 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFKSVPV*MVNSMI
Trigger: GATCATAGAATTGACCATCCAAACTGGGACACTCTT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTTCAGCCCCTTTGCTTaGTCAAGTAGATCAACAAAA +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNFSPFA*SSRSTK
Trigger: TTTTGTTGATCTACTTGACCAAGCAAAGGGGCTGAA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAAGGACATCAGCTAACTaGAGTGATTTACTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKERTSAN*SDLLVK
Trigger: TTTGACAAGTAAATCACTCCAGTTAGCTGATGTCCT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACATGTTACCATTCACATaGAAATTCAAGGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDMLPFT*KFKDPE
Trigger: TTCTGGGTCCTTGAATTTCCATGTGAATGGTAACAT...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp TCCCATGTTTATGAATCTGAAGACTTCATATTGTTAAGTGGACAGTATTCCCCACAGGTCCAGAGATCTTaGGAATCGCAGCGCAACCTT +
Preference number: 4 (lower is better)
Translates to: SHVYESEDFILLSGQYSPQVQRS*ESQRNL
Trigger: AAGGTTGCGCTGCGATTCTCAAGATCTCTGGACCTG...TGGGGAATACTGTCCACTTAACAATATGAAGTCTTCAGATTCATAAACATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAAGTTTAGAATGTCAGTaGAGCTCGTGTAGTAAATTT +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKESLECQ*SSCSKF
Trigger: AAATTTACTACACGAGCTGCACTGACATTCTAAACT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAGTCGTTACCATAGGTaGCCTGCTCACAGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWSRYHR*PAHSGP
Trigger: AGGACCGCTGTGAGCAGGGCACCTATGGTAACGACT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCTGTGTATCCTGGACTaGAATGACATTGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSLCILD*NDIGLW
Trigger: CCACAGGCCAATGTCATTGCAGTCCAGGATACACAG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CAGTTCATCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCACCCCATTTTGGCAGCTaGAGATCTGCTGGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: QFISVYSFRNQRSSQHFPPHFGS*RSAGKL
Trigger: AAGCTTGCCAGCAGATCTGCAGCTGCCAAAATGGGG...TGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGATGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGTGCGGCAAGTACACTaGCCAGAAATGTGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWVRQVH*PEMWSQ
Trigger: CTGCGACCACATTTCTGGGCAGTGTACTTGCCGCAC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTGCTGCTGCTGCTGTTaGTGCTGCTACCACCACTGT +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWCCCCC*CCYHHC
Trigger: ACAGTGGTGGTAGCAGCAGCAACAGCAGCAGCAGCA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGGTGTCATTCACTGCTaGTGCTGCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWGVIHC*CCCCCC
Trigger: GCAGCAGCAACAGCAGCAGCAGCAGTGAATGACACC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATCTTACAATAAGTCATaGTTCACGGGTATAGTTCTA +
Preference number: 4 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKESYNKS*FTGIVL
Trigger: TAGAACTATACCCGTGAAGCATGACTTATTGTAAGA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTCAGCATTCTCATATTaGAAGATAAGTCTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNSAFSY*KISLVC
Trigger: GCAAACCAGACTTATCTTGCAATATGAGAATGCTGA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp CCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACGAAGAAAGCAATCTTTaGGAGTCTTCTTTCAGGCGT +
Preference number: 4 (lower is better)
Translates to: PLETKEALNIFQGAERHYEESNL*ESSFRR
Trigger: ACGCCTGAAAGAAGACTCCCAAAGATTGCTTTCTTC...GTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp TTTCCACCTTGCTTCTTTGTGGAAATTAACATATTGATGTTACCATTCACATGGCCGTACGTGCCATCCTaGCAGGGAAGTTCGCATTTC +
Preference number: 4 (lower is better)
Translates to: FPPCFFVEINILMLPFTWPYVPS*QGSSHF
Trigger: GAAATGCGAACTTCCCTGCCAGGATGGCACGTACGG...CCATGTGAATGGTAACATCAATATGTTAATTTCCACAAAGAAGCAAGGTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCTACCAAGCGGTCCTTTaGTGTCATTCACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSYQAVL*CHSLLL
Trigger: CAGCAGCAGTGAATGACACCAAAGGACCGCTTGGTA...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR CAA 72 bp GCCTCAGCTTTCAGCTTTCTGGTTCATGTCCAAAAATaGCCCACCGAATTGACTAACATTCACATGAAAGTG +
Preference number: 4 (lower is better)
Translates to: ASAFSFLVHVQK*PTELTNIHMKV
Trigger: CACTTTCATGTGAATGTTAGTCAATTCGGTGGGCAATTTTTGGACATGAACCAGAAAGCTGAAAGCTGAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR CAA 72 bp CTGTTCCAGGTCATTCCTTATTTCCTTGAATTGACTTaGGAGTTCCTCAAAATGAACAGCCACCAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LFQVIPYFLELT*EFLKMNSHQCS
Trigger: ACTGCACTGGTGGCTGTTCATTTTGAGGAACTCCAAAGTCAATTCAAGGAAATAAGGAATGACCTGGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR CAA 72 bp AGAATTTCCTATTGTGAAGTCAAGTTATCTCAGGTTTaGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: RISYCEVKLSQV*QVKMELQGWGG
Trigger: GCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCTGAGATAACTTGACTTCACAATAGGAAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR TCA 90 bp GTGGAAATTAACATATTGATGTTACCATTCACATGGAAATTCAAGGACCCAGAACTCTTGCACAGTCACTaGGTAGCTTTCCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: VEINILMLPFTWKFKDPELLHSH*VAFPVA
Trigger: AGCCACTGGGAAAGCTACTCAGTGACTGTGCAAGAG...TTCTGGGTCCTTGAATTTCCATGTGAATGGTAACATCAATATGTTAATTTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp CAGTTCATCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCACACACTCCTCCATTTTaGCAAGGGCATCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QFISVYSFRNQRSSQHFPHTPPF*QGHLCS
Trigger: TGAGCAGAGATGCCCTTGTCAAAATGGAGGAGTGTG...TGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGATGAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp CAGTTCATCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAAGAGCATTCTCCAGTaGCGTGATGACACACTCCTC +
Preference number: 4 (lower is better)
Translates to: QFISVYSFRNQRSSQHFPKSILQ*RDDTLL
Trigger: GAGGAGTGTGTCATCACGTCACTGGAGAATGCTCTT...TGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGATGAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTATCCTGGACTGCAATaGCATTGGCCTGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWYPGLQ*HWPVAA
Trigger: TGCTGCCACAGGCCAATGTCATTGCAGTCCAGGATA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp GTGGAAATTAACATATTGATGTTACCATTCACATGGAAATTCAAGGACCCAGAAACCGTTTGTCACATTTaGTGCCGTAGAGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VEINILMLPFTWKFKDPETVCHI*CRRAPQ
Trigger: CTGAGGGGCTCTACGGCATCAAATGTGACAAACGGT...TTCTGGGTCCTTGAATTTCCATGTGAATGGTAACATCAATATGTTAATTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCAGTCAGCTCCGTTTTaGCATTGGCATATCAGTGCA +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSQSAPF*HWHISA
Trigger: TGCACTGATATGCCAATGTCAAAACGGAGCTGACTG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCATAGCCATATGTTCCTaGAGGGCACTTCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSIAICS*RALLLT
Trigger: TGTGAGCAGAAGTGCCCTTCAGGAACATATGGCTAT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp AAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTCAGTATTCCCCAAATTaGTCTATAGATTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: KKLSTFSKGLRDTTEEVAQYSPN*SIDSIS
Trigger: GGAGATTGAATCTATAGATCAATTTGGGGAATACTG...AGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAGTTTAGAATGTCAGTaGAGCTCGTGTAGTAAATTT +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNSLECQ*SSCSKF
Trigger: AAATTTACTACACGAGCTGCACTGACATTCTAAACT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGTGGGCATGTCTGGCTaGAGCGATGCCCATAAAAAC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWVGMSG*SDAHKN
Trigger: GTTTTTATGGGCATCGCTGCAGCCAGACATGCCCAC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTGGGGAATCTCTTCGTaGCGGCGATTTCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWWGISS*RRFHLH
Trigger: GTGGAGATGAAATCGCCGGCACGAAGAGATTCCCCA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTGCTGCTGTTGCTGCTaGTACCACCACTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWCCCCC*YHHCPL
Trigger: AAGAGGACAGTGGTGGTAGCAGCAGCAACAGCAGCA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGTCATTCACTGCTGCTaGTGCTGTTGCTGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWVIHCC*CCCCCY
Trigger: GTAGCAGCAGCAACAGCAGCAGCAGCAGTGAATGAC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACAGCTCTAATAAGAATTaGCTCAGGTACAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNSSNKN*LRYKCH
Trigger: ATGACATTTGTACCTGAGGCAATTCTTATTAGAGCT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTCTAAACGGGCAGTTTaGTGTACATCTTTAGTTAAT +
Preference number: 4 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNSKRAV*CTSLVN
Trigger: ATTAACTAAAGATGTACAGCAAACTGCCCGTTTAGA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCCTCCATTATGGCACTaGCATTCTTGGGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSPPLWH*HSWEQF
Trigger: GAACTGTTCCCAAGAATGCCAGTGCCATAATGGAGG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TCCCATGTTTATGAATCTGAAGACTTCATATTGTTAAGTGGACAGTATTCCCCACACGTCCCTCCATTATaGCACTGGCATTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SHVYESEDFILLSGQYSPHVPPL*HWHSWE
Trigger: TTCCCAAGAATGCCAGTGCCATAATGGAGGGACGTG...TGGGGAATACTGTCCACTTAACAATATGAAGTCTTCAGATTCATAAACATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGACAGGACACTCATCCTaGCACCGTTCCCCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWTGHSS*HRSPVY
Trigger: ATACACAGGGGAACGGTGCCAGGATGAGTGTCCTGT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTTCCACCTTGCTTCTTTGTGGAAATTAACATATTGATGTTACCATTCACATGGACAGGACACTCATCCTaGCACCGTTCCCCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: FPPCFFVEINILMLPFTWTGHSS*HRSPVY
Trigger: ATACACAGGGGAACGGTGCCAGGATGAGTGTCCTGT...CCATGTGAATGGTAACATCAATATGTTAATTTCCACAAAGAAGCAAGGTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCACCAAACAGCAGTTCTaGAAAGGGTTCCAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSTKQQF*KGFQWL
Trigger: TAGCCACTGGAACCCTTTCCAGAACTGCTGTTTGGT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTGCTCCCCTTCTCCCTaGTTTAACCAAGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWCSPSP*FNQGSA
Trigger: TGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR CAA 72 bp GAGTCAAACAGAGAAAACCACCTCTGCCTGGCACATTaGTGTATTGACTTCTGCAATACTTCCTACTATTTC +
Preference number: 4 (lower is better)
Translates to: ESNRENHLCLAH*CIDFCNTSYYF
Trigger: GAAATAGTAGGAAGTATTGCAGAAGTCAATACACAAATGTGCCAGGCAGAGGTGGTTTTCTCTGTTTGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp CAGTTCATCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCATTCAAGATTCAGAGGTaGTGCTGTCCCAATCCAGTG +
Preference number: 4 (lower is better)
Translates to: QFISVYSFRNQRSSQHFPFKIQR*CCPNPV
Trigger: CACTGGATTGGGACAGCATCACCTCTGAATCTTGAA...TGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGATGAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCACACTCCTCCATTTTaGCAAGGGCATCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWHTPPF*QGHLCS
Trigger: TGAGCAGAGATGCCCTTGTCAAAATGGAGGAGTGTG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAAGAGCATTCTCCAGTaGCGTGATGACACACTCCTC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWKSILQ*RDDTLL
Trigger: GAGGAGTGTGTCATCACGTCACTGGAGAATGCTCTT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTGGAGTTCCTCAAAATaGACAGCCACCAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWWSSSK*TATSAV
Trigger: CACTGCACTGGTGGCTGTTCATTTTGAGGAACTCCA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCACTCCTTTACTGCTTTaGCCACCATGGGATACAGAA +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSTPLLL*PPWDTE
Trigger: TTCTGTATCCCATGGTGGTCAAAGCAGTAAAGGAGT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTGGTAGAAAATAAAGTCCATTGCACCAGCCTTAGCCTGTTTCCCAAGGTAGCTCAGAATTTCCTATTGTaGAGTCAAGTTATCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LVENKVHCTSLSLFPKVAQNFLL*SQVISG
Trigger: ACCTGAGATAACTTGACTTCACAATAGGAAATTCTG...AGCTACCTTGGGAAACAGGCTAAGGCTGGTGCAATGGACTTTATTTTCTACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCTGTCCAGCCAGGAGTaGATTTACATTCCCCATCGT +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWLSSQE*IYIPHR
Trigger: ACGATGGGGAATGTAAATGCACTCCTGGCTGGACAG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCATGGGTTCTCAGAACTaGTTAGGGAGCAGTTACTTG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSMGSQN*LGSSYL
Trigger: CAAGTAACTGCTCCCTAAGCAGTTCTGAGAACCCAT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCATTTATCAGCACAGTaGGGGACACACATTTCCCCG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWHLSAQ*GTHISP
Trigger: CGGGGAAATGTGTGTCCCCCACTGTGCTGATAAATG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGCAATACAGCGACCATaGACACATTTATCAGCACAG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSAIQRP*THLSAQ
Trigger: CTGTGCTGATAAATGTGTCCATGGTCGCTGTATTGC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCTGGCACTGGCATTCTTaGGAACAGTTCTTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSWHWHS*EQFFPK
Trigger: CTTTGGAAAGAACTGTTCCCAAGAATGCCAGTGCCA...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCACGTCCCTCCATTATaGCACTGGCATTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWHVPPL*HWHSWE
Trigger: TTCCCAAGAATGCCAGTGCCATAATGGAGGGACGTG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTTCCCCTGTGTATCCTaGACTGCAATGACATTGGCC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWFPCVS*TAMTLA
Trigger: GGCCAATGTCATTGCAGTCCAGGATACACAGGGGAA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCACACTCTCCAGACATaGGGTGACAGCTATGAGTGT +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWHTLQT*GDSYEC
Trigger: ACACTCATAGCTGTCACCCCATGTCTGGAGAGTGTG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGACAAGATCTGTCAATaGGGTTACAGGTTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSDKICQ*GYRFRC
Trigger: ACAACGGAACCTGTAACCCCATTGACAGATCTTGTC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTACCAAGCGGTCCTTTaGTGTCATTCACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWYQAVL*CHSLLL
Trigger: CAGCAGCAGTGAATGACACCAAAGGACCGCTTGGTA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGTGAGGAAGGGTTCCTaGAATGGTATAATCTGCATT +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSVRKGS*NGIICI
Trigger: AATGCAGATTATACCATTTCAGGAACCCTTCCTCAC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTTTCCACCATTGCTGTaGGGAAGGGTTCCTGAAATG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWFPPLL*GRVPEM
Trigger: CATTTCAGGAACCCTTCCTCACAGCAATGGTGGAAA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCTTGCTATGTGTGTCCTaGTGTTTGAAAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSLLCVS*CLKSPE
Trigger: CTCAGGACTTTTCAAACATCAGGACACACATAGCAA...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCTTTGGGGGTCAAGATaGCCACACTTTCATAAAGTT +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSLWGSR*PHFHKV
Trigger: AACTTTATGAAAGTGTGGTCATCTTGACCCCCAAAG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGCATGTACACTTTCATaGTGTGAAGCCTTTAAGACC +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSACTLS*CEAFKT
Trigger: GGTCTTAAAGGCTTCACATCATGAAAGTGTACATGC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAGGTTCCGTTGTTGGTaGAGGTACAAATTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWRFRCW*RYKFLH
Trigger: GTGCAGGAATTTGTACCTGCACCAACAACGGAACCT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAAGAATGATGATGCCTaGAATGGCCCCGATCTGGTA +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWKNDDA*NGPDLV
Trigger: TACCAGATCGGGGCCATTGCAGGCATCATCATTCTT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCATGTCTCAATTAGATaGCTATCACCTAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSHVSIR*LSPRVG
Trigger: CCCAACTCTAGGTGATAGGCATCTAATTGAGACATG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGAAGAAAGCAATCTTTaGGAGTCTTCTTTCAGGCGT +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSEESNL*ESSFRR
Trigger: ACGCCTGAAAGAAGACTCCCAAAGATTGCTTTCTTC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TCCCATGTTTATGAATCTGAAGACTTCATATTGTTAAGTGGACAGTATTCCCCATGGCACTGGCATTCTTaGGAACAGTTCTTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SHVYESEDFILLSGQYSPWHWHS*EQFFPK
Trigger: CTTTGGAAAGAACTGTTCCCAAGAATGCCAGTGCCA...TGGGGAATACTGTCCACTTAACAATATGAAGTCTTCAGATTCATAAACATGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp GTGGAAATTAACATATTGATGTTACCATTCACATGGAAATTCAAGGACCCAGAACCTCCATTATGGCACTaGCATTCTTGGGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: VEINILMLPFTWKFKDPEPPLWH*HSWEQF
Trigger: GAACTGTTCCCAAGAATGCCAGTGCCATAATGGAGG...TTCTGGGTCCTTGAATTTCCATGTGAATGGTAACATCAATATGTTAATTTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAATTCCTTTGAATCCTaGGGCACAGGTGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWNSFES*GTGALS
Trigger: GGAAAGTGCACCTGTGCCCCAGGATTCAAAGGAATT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTTCCACCTTGCTTCTTTGTGGAAATTAACATATTGATGTTACCATTCACATGGAATTCCTTTGAATCCTaGGGCACAGGTGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: FPPCFFVEINILMLPFTWNSFES*GTGALS
Trigger: GGAAAGTGCACCTGTGCCCCAGGATTCAAAGGAATT...CCATGTGAATGGTAACATCAATATGTTAATTTCCACAAAGAAGCAAGGTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTCCCAAATCTGCCACTaGGACACACTTCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWSQICH*DTLHCR
Trigger: TCTGCAATGAAGTGTGTCCCAGTGGCAGATTTGGGA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCAGAAAGCTCCATTATaGCAGTTGCACGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWQKAPL*QLHVWM
Trigger: CATCCACACGTGCAACTGCCATAATGGAGCTTTCTG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAGGTCATATGGATCCTaGGAGAGACGCCCATTATTG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWRSYGS*ERRPLL
Trigger: CAATAATGGGCGTCTCTCCCAGGATCCATATGACCT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCTGAAGTTGAGTTATTaGTCTCTGCATATGGGGAAT +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSLKLSY*SLHMGN
Trigger: ATTCCCCATATGCAGAGATCAATAACTCAACTTCAG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTTCCACCTTGCTTCTTTGTGGAAATTAACATATTGATGTTACCATTCACATGGCACAGGAGAGCAGACTaGATCATTTTTACAGCCACA +
Preference number: 4 (lower is better)
Translates to: FPPCFFVEINILMLPFTWHRRAD*IIFTAT
Trigger: TGTGGCTGTAAAAATGATGCAGTCTGCTCTCCTGTG...CCATGTGAATGGTAACATCAATATGTTAATTTCCACAAAGAAGCAAGGTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCAAGATAAGTCTGGTTTaGCTGGAACAGTCCAGATTT +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSKISLV*LEQSRF
Trigger: AAATCTGGACTGTTCCAGGCAAACCAGACTTATCTT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCTTGGGAGCCAGCCAGTaGTTAACTATTGGAATAAAT +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSLGASQ*LTIGIN
Trigger: ATTTATTCCAATAGTTAACCACTGGCTGGCTCCCAA...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCAAAAAGGACCCCGATaGCTATTGACTCACACATGT +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWQKGPR*LLTHTC
Trigger: ACATGTGTGAGTCAATAGCCATCGGGGTCCTTTTTG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGACACAGTCATTATGCTaGTGGATTTGGTTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWTQSLC*WIWFSQ
Trigger: CTGACTGAACCAAATCCATCAGCATAATGACTGTGT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp CAGTTCATCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCATCTCTGAAATCCGCTTaGTTCTCCTTCTTTAATGGA +
Preference number: 4 (lower is better)
Translates to: QFISVYSFRNQRSSQHFPSLKSA*FSFFNG
Trigger: TCCATTAAAGAAGGAGAAGCAAGCGGATTTCAGAGA...TGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGATGAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418761.6
CDS-3UTR GCA 90 bp TCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTAGTTTAGAATGTCAGTaGAGCTCGTGTAGTAAATTT +
Preference number: 4 (lower is better)
Translates to: SQFTPLETKEALNIFQGASLECQ*SSCSKF
Trigger: AAATTTACTACACGAGCTGCACTGACATTCTAAACT...AGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCACGTAATTCACACTTaGATATGCATGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSHVIHT*ICMYTF
Trigger: GAAAGTGTACATGCATATGCAAGTGTGAATTACGTG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTTGCTGAATACTCCTTaGACAACACTCACTGTAGGT +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWLLNTP*TTLTVG
Trigger: ACCTACAGTGAGTGTTGTCCAAGGAGTATTCAGCAA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCAGGACATCAGCTAACTaGAGTGATTTACTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSRTSAN*SDLLVK
Trigger: TTTGACAAGTAAATCACTCCAGTTAGCTGATGTCCT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR CAA 72 bp ATAAACAAGCAAACATCCATACCACGTAATTCACACTaGCATATGCATGTACACTTTCATGATGTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: INKQTSIPRNSH*HMHVHFHDVKP
Trigger: AGGCTTCACATCATGAAAGTGTACATGCATATGCAAGTGTGAATTACGTGGTATGGATGTTTGCTTGTTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGGCACATTTGTGTATTaGCTTCTGCAATACTTCCTA +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWGTFVY*LLQYFL
Trigger: TAGGAAGTATTGCAGAAGTCAATACACAAATGTGCC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTGCCGATGTGTGACATaGAATAACTGGATATTCCAA +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWCRCVT*NNWIFQ
Trigger: TTGGAATATCCAGTTATTTCATGTCACACATCGGCA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGATACGTGCCGATGTGTaGCATGAAATAACTGGATAT +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWIRADV*HEITGY
Trigger: ATATCCAGTTATTTCATGTCACACATCGGCACGTAT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTACTTGCTGCAAACTTaGACAAGGTTTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWYLLQT*TRFSLS
Trigger: AGACAGAGAAAACCTTGTTCAAGTTTGCAGCAAGTA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503335.7
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTGTTCTAAGTGTGTCTaGTGTATTATCCATCTGACC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWCSKCV*CIIHLT
Trigger: GGTCAGATGGATAATACAGCAGACACACTTAGAACA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR GCA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCAGCTCTAATAAGAATTaGCTCAGGTACAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSSSNKN*LRYKCH
Trigger: ATGACATTTGTACCTGAGGCAATTCTTATTAGAGCT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCAGCTTTCAGCTTTCTaGTTCATGTCCAAAAATTGC +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWQLSAF*FMSKNC
Trigger: GCAATTTTTGGACATGAACCAGAAAGCTGAAAGCTG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTCAGTCATATCAAAATaGAGCCTAGACCAAATACTG +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWSVISK*SLDQIL
Trigger: CAGTATTTGGTCTAGGCTTCATTTTGATATGACTGA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR TCA 90 bp TTTCCACCTTGCTTCTTTGTGGAAATTAACATATTGATGTTACCATTCACATGGCAGTATTCCCCAAATTaGTCTATAGATTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: FPPCFFVEINILMLPFTWQYSPN*SIDSIS
Trigger: GGAGATTGAATCTATAGATCAATTTGGGGAATACTG...CCATGTGAATGGTAACATCAATATGTTAATTTCCACAAAGAAGCAAGGTGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
3UTR CAA 72 bp CATTTCTCAGAACACACAGTCATTATGCTGATGGATTaGGTTCAGTCAGGTTATAACTGTCCTATTATAAAG +
Preference number: 4 (lower is better)
Translates to: HFSEHTVIMLMD*VQSGYNCPIIK
Trigger: CTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCATCAGCATAATGACTGTGTGTTCTGAGAAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
3UTR CAA 72 bp AAATTTCCACCTTGCTTCTTTGTGGAAATTAACATATaGATGTTACCATTCACATGGAAATTCAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: KFPPCFFVEINI*MLPFTWKFKDP
Trigger: TGGGTCCTTGAATTTCCATGTGAATGGTAACATCAATATGTTAATTTCCACAAAGAAGCAAGGTGGAAATTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR GCA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTCTAAACGGGCAGTTTaGTGTACATCTTTAGTTAAT +
Preference number: 4 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWSKRAV*CTSLVN
Trigger: ATTAACTAAAGATGTACAGCAAACTGCCCGTTTAGA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CCA 90 bp GTGGAAATTAACATATTGATGTTACCATTCACATGGAAATTCAAGGACCCAGAACTTCATATTGTTAAGTaGACAGTATTCCCCAAATTG +
Preference number: 4 (lower is better)
Translates to: VEINILMLPFTWKFKDPELHIVK*TVFPKL
Trigger: CAATTTGGGGAATACTGTCCACTTAACAATATGAAG...TTCTGGGTCCTTGAATTTCCATGTGAATGGTAACATCAATATGTTAATTTCCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS GCA 90 bp GCCATCCTGGCAGGGAAGTTCGCATTTCTCCCCGCGCCATCCAGGTaGACACGTGCAGGTCCCGTCCAGGGTGTTGCAGGCTCCCCCGTT +
Preference number: 5 (lower is better)
Translates to: AILAGKFAFLPAPSR*TRAGPVQGVAGSPV
Trigger: AACGGGGGAGCCTGCAACACCCTGGACGGGACCTGCACGTGTGCACCTGGATGGCGCGGGGAGAAATGCGAACTTCCCTGCCAGGATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS TCA 90 bp GTGCACACGTGCAGGTCCCGTCCAGGGTGTTGCAGGCTCCCCCGTTaGGGCACTGGCATGTTAAGTTACAGCCAAAGCCCCATGTGCCAC +
Preference number: 5 (lower is better)
Translates to: VHTCRSRPGCCRLPR*GTGMLSYSQSPMCH
Trigger: GTGGCACATGGGGCTTTGGCTGTAACTTAACATGCCAGTGCCTCAACGGGGGAGCCTGCAACACCCTGGACGGGACCTGCACGTGTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS-3UTR CAA 90 bp AGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGGGTAGCTCCTATTGGTCCTGACCAGCCCGGCTaGCAGGCACACTCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: RWNYRVGEASCLWVAPIGPDQPG*QAHSPD
Trigger: GTCTGGAGAGTGTGCCTGCAAGCCGGGCTGGTCAGG...ACCAATAGGAGCTACCCACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS CCA 90 bp GCTGCAGAAAGCTCCATTATGGCAGTTGCACGTGTGGATGCAGTTTaGGCCCCAGTGGGCAGGTGGACATGGTTGAGAGCAGTCACTGCC +
Preference number: 5 (lower is better)
Translates to: AAESSIMAVARVDAV*APVGRWTWLRAVTA
Trigger: GGCAGTGACTGCTCTCAACCATGTCCACCTGCCCACTGGGGCCCAAACTGCATCCACACGTGCAACTGCCATAATGGAGCTTTCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000506709.1
CDS-3UTR CAA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAGTCCCGTCCAGGGTGTaGCAGGCTCCCCCGTTGAGG +
Preference number: 5 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEVPSRV*QAPPLR
Trigger: CCTCAACGGGGGAGCCTGCAACACCCTGGACGGGAC...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS TCA 90 bp GGACACTCATCCTGGCACCGTTCCCCTGTGTATCCTGGACTGCAATaGCATTGGCCTGTGGCAGCATCACACGTCCCTCCATTATGGCAC +
Preference number: 5 (lower is better)
Translates to: GHSSWHRSPVYPGLQ*HWPVAASHVPPLWH
Trigger: GTGCCATAATGGAGGGACGTGTGATGCTGCCACAGGCCAATGTCATTGCAGTCCAGGATACACAGGGGAACGGTGCCAGGATGAGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS TCA 90 bp AGCTATGAGTGTTTTCCAGGTGGCAGGGACACCGTTTGTCACATTTaGTGCCGTAGAGCCCCTCAGGACACAGGCGTGCTTCGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: SYECFPGGRDTVCHI*CRRAPQDTGVLRSA
Trigger: AGCGCTGCGAAGCACGCCTGTGTCCTGAGGGGCTCTACGGCATCAAATGTGACAAACGGTGTCCCTGCCACCTGGAAAACACTCATAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
ENST00000515002.1
CDS GCA 90 bp TACATTCCCCATCGTAGGCGCTGCAGAAAGCTCCATTATGGCAGTTaGACGTGTGGATGCAGTTTGGGCCCCAGTGGGCAGGTGGACATG +
Preference number: 5 (lower is better)
Translates to: YIPHRRRCRKLHYGS*TCGCSLGPSGQVDM
Trigger: CATGTCCACCTGCCCACTGGGGCCCAAACTGCATCCACACGTGCAACTGCCATAATGGAGCTTTCTGCAGCGCCTACGATGGGGAATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000506709.1
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCCTGACCAGCCCGGCTaGCAGGCACACTCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFPDQPG*QAHSPD
Trigger: GTCTGGAGAGTGTGCCTGCAAGCCGGGCTGGTCAGG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp GTAGAAAATAAAGTCCATTGCACCAGCCTTAGCCTGTTTCCCAAGGTAGCTCTCGTCCCGTCCAGGGTGTaGCAGGCTCCCCCGTTGAGG +
Preference number: 5 (lower is better)
Translates to: VENKVHCTSLSLFPKVALVPSRV*QAPPLR
Trigger: CCTCAACGGGGGAGCCTGCAACACCCTGGACGGGAC...GAGAGCTACCTTGGGAAACAGGCTAAGGCTGGTGCAATGGACTTTATTTTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS TCA 90 bp TTCCCCGTAGAATCCAGGAGAACATGTCTCATTACAGTAGAGTCCTaGCCAGCCCGGCTTGCAGGCACACTCTCCAGACATGGGGTGACA +
Preference number: 5 (lower is better)
Translates to: FPVESRRTCLITVES*PARLAGTLSRHGVT
Trigger: TGTCACCCCATGTCTGGAGAGTGTGCCTGCAAGCCGGGCTGGTCAGGACTCTACTGTAATGAGACATGTTCTCCTGGATTCTACGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS GCA 90 bp CAACAGGACACTCATCCTGGCACCGTTCCCCTGTGTATCCTGGACTaGAATGACATTGGCCTGTGGCAGCATCACACGTCCCTCCATTAT +
Preference number: 5 (lower is better)
Translates to: QQDTHPGTVPLCILD*NDIGLWQHHTSLHY
Trigger: ATAATGGAGGGACGTGTGATGCTGCCACAGGCCAATGTCATTGCAGTCCAGGATACACAGGGGAACGGTGCCAGGATGAGTGTCCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CCA 90 bp AACAGCAGTTCTGGAAAGGGTTCCAGTGGCTACCAAGCGGTCCTTTaGTGTCATTCACTGCTGCTGCTGCTGTTGCTGCTGCTACCACCA +
Preference number: 5 (lower is better)
Translates to: NSSSGKGSSGYQAVL*CHSLLLLLLLLLPP
Trigger: TGGTGGTAGCAGCAGCAACAGCAGCAGCAGCAGTGAATGACACCAAAGGACCGCTTGGTAGCCACTGGAACCCTTTCCAGAACTGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACCACAGAGCCCCATTTTaGCACTGGCACCGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDHRAPF*HWHRLV
Trigger: CACCAGCCGGTGCCAGTGCAAAAATGGGGCTCTGTG...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACCCGTGCCAGCCTGCCTaGCAAGTACAAGACCCGTCC +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNPCQPA*QVQDPS
Trigger: GGACGGGTCTTGTACTTGCAAGGCAGGCTGGCACGG...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp AAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTCCGTGCCAGCCTGCCTaGCAAGTACAAGACCCGTCC +
Preference number: 5 (lower is better)
Translates to: KLSTFSKGLRDTTEEVAGPCQPA*QVQDPS
Trigger: GGACGGGTCTTGTACTTGCAAGGCAGGCTGGCACGG...ACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp CCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACGTCCCGTCCAGGGTGTaGCAGGCTCCCCCGTTGAGG +
Preference number: 5 (lower is better)
Translates to: PLETKEALNIFQGAERHYVPSRV*QAPPLR
Trigger: CCTCAACGGGGGAGCCTGCAACACCCTGGACGGGAC...GTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp CCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTCCGTGCCAGCCTGCCTaGCAAGTACAAGACCCGTCC +
Preference number: 5 (lower is better)
Translates to: PKKLSTFSKGLRDTTEEVPCQPA*QVQDPS
Trigger: GGACGGGTCTTGTACTTGCAAGGCAGGCTGGCACGG...AACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS GCA 90 bp CAGGAGAACATGTCTCATTACAGTAGAGTCCTGACCAGCCCGGCTTaGAGGCACACTCTCCAGACATGGGGTGACAGCTATGAGTGTTTT +
Preference number: 5 (lower is better)
Translates to: QENMSHYSRVLTSPA*RHTLQTWGDSYECF
Trigger: AAAACACTCATAGCTGTCACCCCATGTCTGGAGAGTGTGCCTGCAAGCCGGGCTGGTCAGGACTCTACTGTAATGAGACATGTTCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS-3UTR CAA 90 bp CAGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGCACACTGACAGGTGTTaGGAGCAATACAGCGACCAT +
Preference number: 5 (lower is better)
Translates to: QVLQVKMELQGWGGLVSVHTDRC*EQYSDH
Trigger: ATGGTCGCTGTATTGCTCCAAACACCTGTCAGTGTG...CACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR CAA 90 bp CAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGCCTGACCAGCCCGGCTaGCAGGCACACTCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: QFTPLETKEALNIFQGAEPDQPG*QAHSPD
Trigger: GTCTGGAGAGTGTGCCTGCAAGCCGGGCTGGTCAGG...CTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAACAGTCTGCCCCATTTaGGCAGCTGCAGATCTGCTG +
Preference number: 5 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKETVCPI*AAADLL
Trigger: CAGCAGATCTGCAGCTGCCAAAATGGGGCAGACTGT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTTGCAGGCTCCCCCGTaGAGGCACTGGCATGTTAAG +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNLQAPP*RHWHVK
Trigger: CTTAACATGCCAGTGCCTCAACGGGGGAGCCTGCAA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAGATGGCAGTGGCCCCTaGGAGTCCACATCTATTGTC +
Preference number: 5 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEDGSGP*ESTSIV
Trigger: GACAATAGATGTGGACTCCAAGGGGCCACTGCCATC...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCCCAGTCGCCCAGTTTaGCGCACCGGGAAAGTACTT +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFPSRPV*RTGKVL
Trigger: AAGTACTTTCCCGGTGCGCAAAACTGGGCGACTGGG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503335.7
CDS GCA 90 bp CCAGCCTGCCTTGCAAGTACAAGACCCGTCCACAGGAGAGCAGACTaGATCATTTTTACAGCCACAGCGAGAGGAACAGTTTATCCCATA +
Preference number: 5 (lower is better)
Translates to: PACLASTRPVHRRAD*IIFTATARGTVYPI
Trigger: TATGGGATAAACTGTTCCTCTCGCTGTGGCTGTAAAAATGATGCAGTCTGCTCTCCTGTGGACGGGTCTTGTACTTGCAAGGCAGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CCA 90 bp GTGCCTGCCAGTAGGAAGGCTTGGAGTTTTCTAACACGAAATGTTTaGCTAGTGGGGTATTGCCCTCTGTTGGGAAGAAGGGCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: VPASRKAWSFLTRNV*LVGYCPLLGRRAAK
Trigger: TTTGGCAGCCCTTCTTCCCAACAGAGGGCAATACCCCACTAGCCAAACATTTCGTGTTAGAAAACTCCAAGCCTTCCTACTGGCAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515002.1
CDS-3UTR CAA 90 bp TTGGTAGAAAATAAAGTCCATTGCACCAGCCTTAGCCTGTTTCCCAAGGTAGCTCACAGAGCCCCATTTTaGCACTGGCACCGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LVENKVHCTSLSLFPKVAHRAPF*HWHRLV
Trigger: CACCAGCCGGTGCCAGTGCAAAAATGGGGCTCTGTG...AGCTACCTTGGGAAACAGGCTAAGGCTGGTGCAATGGACTTTATTTTCTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR CAA 90 bp AGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGGGTAGCTCCTATTGGTATGGCACTGGCATTCTaGGGAACAGTTCTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: RWNYRVGEASCLWVAPIGMALAF*GTVLSK
Trigger: TTTGGAAAGAACTGTTCCCAAGAATGCCAGTGCCAT...ACCAATAGGAGCTACCCACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR CAA 90 bp CTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTGCTGGTGACTGGACTGCAATGACATaGGCCTGTGGCAGCATCACA +
Preference number: 5 (lower is better)
Translates to: LSTFSKGLRDTTEEVAGDWTAMT*ACGSIT
Trigger: TGTGATGCTGCCACAGGCCAATGTCATTGCAGTCCA...GTCACCAGCAACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACACAGTCTGCCCCATTTaGGCAGCTGCAGATCTGCTG +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNTVCPI*AAADLL
Trigger: CAGCAGATCTGCAGCTGCCAAAATGGGGCAGACTGT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAGAGCAGTCAATTCCTTaGAATCCTGGGGCACAGGTG +
Preference number: 5 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEEQSIP*NPGAQV
Trigger: CACCTGTGCCCCAGGATTCAAAGGAATTGACTGCTC...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGGCAGGTGGACATGGTaGAGAGCAGTCACTGCCAAT +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNGRWTW*RAVTAN
Trigger: ATTGGCAGTGACTGCTCTCAACCATGTCCACCTGCC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGCCTATCACCTAGAGTaGGGAGCCAGCCAGTGGTTA +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNAYHLE*GASQWL
Trigger: TAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGATGGCAGTGGCCCCTaGGAGTCCACATCTATTGTC +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNDGSGP*ESTSIV
Trigger: GACAATAGATGTGGACTCCAAGGGGCCACTGCCATC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAAGCTACTGTGGCTCTTaGGGGGTCAAGATGACCACA +
Preference number: 5 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKESYCGS*GVKMTT
Trigger: TGTGGTCATCTTGACCCCCAAAGAGCCACAGTAGCT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp GTAGAAAATAAAGTCCATTGCACCAGCCTTAGCCTGTTTCCCAAGGTAGCTCTCGATGGAACTACAGGGTaGGGGAGGCCTCGTGTCTGT +
Preference number: 5 (lower is better)
Translates to: VENKVHCTSLSLFPKVALDGTTG*GRPRVC
Trigger: ACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATC...GAGAGCTACCTTGGGAAACAGGCTAAGGCTGGTGCAATGGACTTTATTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS CCA 90 bp ACGTCCTCGATTCCAACATGGGAAGTGCCTGCCAGTAGGAAGGCTTaGAGTTTTCTAACACGAAATGTTTGGCTAGTGGGGTATTGCCCT +
Preference number: 5 (lower is better)
Translates to: TSSIPTWEVPASRKA*SFLTRNVWLVGYCP
Trigger: AGGGCAATACCCCACTAGCCAAACATTTCGTGTTAGAAAACTCCAAGCCTTCCTACTGGCAGGCACTTCCCATGTTGGAATCGAGGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515002.1
CDS-3UTR CAA 90 bp AGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTGGGTAGCTCCTATTGGTGCTCGTGTAGTAAATTaGATCAAAGGGATGTGGGTA +
Preference number: 5 (lower is better)
Translates to: RWNYRVGEASCLWVAPIGARVVN*IKGMWV
Trigger: TACCCACATCCCTTTGATCAAATTTACTACACGAGC...ACCAATAGGAGCTACCCACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACTGGACTGCAATGACATaGGCCTGTGGCAGCATCACA +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNWTAMT*ACGSIT
Trigger: TGTGATGCTGCCACAGGCCAATGTCATTGCAGTCCA...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCCTGACCAGCCCGGCTaGCAGGCACACTCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSPDQPG*QAHSPD
Trigger: GTCTGGAGAGTGTGCCTGCAAGCCGGGCTGGTCAGG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACTGAAGAGGTTACAGTCTGCCCCATTTaGGCAGCTGCAGATCTGCTG +
Preference number: 5 (lower is better)
Translates to: PKKLSTFSKGLRDTTEEVTVCPI*AAADLL
Trigger: CAGCAGATCTGCAGCTGCCAAAATGGGGCAGACTGT...AACCTCTTCAGTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGAGCAGTCAATTCCTTaGAATCCTGGGGCACAGGTG +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNEQSIP*NPGAQV
Trigger: CACCTGTGCCCCAGGATTCAAAGGAATTGACTGCTC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAGGACCCCGATGGCTATaGACTCACACATGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEGPRWL*THTCLN
Trigger: ATTGAGACATGTGTGAGTCAATAGCCATCGGGGTCC...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TCAGGTTTTGCAAGTCAAGATGGAACTACAGGGTTGGGGAGGCCTCGTGTCTGTAGAAGAAAGCAATCTTaGGGAGTCTTCTTTCAGGCG +
Preference number: 5 (lower is better)
Translates to: SGFASQDGTTGLGRPRVCRRKQS*GVFFQA
Trigger: CGCCTGAAAGAAGACTCCCAAAGATTGCTTTCTTCT...ACAGACACGAGGCCTCCCCAACCCTGTAGTTCCATCTTGACTTGCAAAACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCACACTGACAGGTGTTaGGAGCAATACAGCGACCAT +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFHTDRC*EQYSDH
Trigger: ATGGTCGCTGTATTGCTCCAAACACCTGTCAGTGTG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGTCCCGTCCAGGGTGTaGCAGGCTCCCCCGTTGAGG +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWVPSRV*QAPPLR
Trigger: CCTCAACGGGGGAGCCTGCAACACCCTGGACGGGAC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCACGTGTGGATGCAGTTaGGGCCCCAGTGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSTCGCS*GPSGQV
Trigger: CACCTGCCCACTGGGGCCCAAACTGCATCCACACGT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGCTCCATTATGGCAGTaGCACGTGTGGATGCAGTTT +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNAPLWQ*HVWMQF
Trigger: AAACTGCATCCACACGTGCAACTGCCATAATGGAGC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGCAGTCAGCTCCGTTTaGACATTGGCATATCAGTGC +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNAVSSV*TLAYQC
Trigger: GCACTGATATGCCAATGTCAAAACGGAGCTGACTGC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATGGTCGCAGGTGGAGTaGTTCAGACAATCACATATC +
Preference number: 5 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEWSQVE*FRQSHI
Trigger: GATATGTGATTGTCTGAACAACTCCACCTGCGACCA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGGACCCCGATGGCTATaGACTCACACATGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFGPRWL*THTCLN
Trigger: ATTGAGACATGTGTGAGTCAATAGCCATCGGGGTCC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS GCA 90 bp GTCAATGGGGTTACAGGTTCCGTTGTTGGTGCAGGTACAAATTCCTaGACAGTTTTTCCCAAATCTGCCACTGGGACACACTTCATTGCA +
Preference number: 5 (lower is better)
Translates to: VNGVTGSVVGAGTNS*TVFPKSATGTHFIA
Trigger: TGCAATGAAGTGTGTCCCAGTGGCAGATTTGGGAAAAACTGTGCAGGAATTTGTACCTGCACCAACAACGGAACCTGTAACCCCATTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000506709.1
CDS GCA 90 bp AAGGCTTGGAGTTTTCTAACACGAAATGTTTGGCTAGTGGGGTATTaGCCTCTGTTGGGAAGAAGGGCTGCCAAATGGCAAGGAGTAAAG +
Preference number: 5 (lower is better)
Translates to: KAWSFLTRNVWLVGY*PLLGRRAAKWQGVK
Trigger: CTTTACTCCTTGCCATTTGGCAGCCCTTCTTCCCAACAGAGGGCAATACCCCACTAGCCAAACATTTCGTGTTAGAAAACTCCAAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515002.1
CDS-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCACAGAGCCCCATTTTaGCACTGGCACCGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSHRAPF*HWHRLV
Trigger: CACCAGCCGGTGCCAGTGCAAAAATGGGGCTCTGTG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGACAGTCTGCCCCATTTaGGCAGCTGCAGATCTGCTG +
Preference number: 5 (lower is better)
Translates to: QFTPLETKEALNIFQGAETVCPI*AAADLL
Trigger: CAGCAGATCTGCAGCTGCCAAAATGGGGCAGACTGT...CTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp CCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACGAGCAGTCAATTCCTTaGAATCCTGGGGCACAGGTG +
Preference number: 5 (lower is better)
Translates to: PLETKEALNIFQGAERHYEQSIP*NPGAQV
Trigger: CACCTGTGCCCCAGGATTCAAAGGAATTGACTGCTC...GTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGGGTTACAGGTTCCGTaGTTGGTGCAGGTACAAATT +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNGLQVP*LVQVQI
Trigger: AATTTGTACCTGCACCAACAACGGAACCTGTAACCC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAAGCTCCGTTTTGACATaGGCATATCAGTGCACAATC +
Preference number: 5 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKESSVLT*AYQCTI
Trigger: GATTGTGCACTGATATGCCAATGTCAAAACGGAGCT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAAATTGCTGAATACTCCTaGGACAACACTCACTGTAGG +
Preference number: 5 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEIAEYS*DNTHCR
Trigger: CCTACAGTGAGTGTTGTCCAAGGAGTATTCAGCAAT...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGAGAGACGCCCATTATaGCTGAATACTCCTTGGACA +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFERRPL*LNTPWT
Trigger: TGTCCAAGGAGTATTCAGCAATAATGGGCGTCTCTC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGAGAGACGCCCATTATaGCTGAATACTCCTTGGACA +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNERRPL*LNTPWT
Trigger: TGTCCAAGGAGTATTCAGCAATAATGGGCGTCTCTC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS TCA 90 bp GGAATCTCTTCGTGCCGGCGATTTCATCTCCACATAACCACACTCTaGGCTTTTCGGGATAAGTACAGGTGGGTCTTTAATAGTGGCATA +
Preference number: 5 (lower is better)
Translates to: GISSCRRFHLHITTL*AFRDKYRWVFNSGI
Trigger: TATGCCACTATTAAAGACCCACCTGTACTTATCCCGAAAAGCTCAGAGTGTGGTTATGTGGAGATGAAATCGCCGGCACGAAGAGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000510828.5
ENST00000515622.1
CDS GCA 90 bp AACACTGACAAGATCTGTCAATGGGGTTACAGGTTCCGTTGTTGGTaGAGGTACAAATTCCTGCACAGTTTTTCCCAAATCTGCCACTGG +
Preference number: 5 (lower is better)
Translates to: NTDKICQWGYRFRCW*RYKFLHSFSQICHW
Trigger: CCAGTGGCAGATTTGGGAAAAACTGTGCAGGAATTTGTACCTGCACCAACAACGGAACCTGTAACCCCATTGACAGATCTTGTCAGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000506709.1
CDS CCA 90 bp GGTAACACTGACAAGATCTGTCAATGGGGTTACAGGTTCCGTTGTTaGTGCAGGTACAAATTCCTGCACAGTTTTTCCCAAATCTGCCAC +
Preference number: 5 (lower is better)
Translates to: GNTDKICQWGYRFRC*CRYKFLHSFSQICH
Trigger: GTGGCAGATTTGGGAAAAACTGTGCAGGAATTTGTACCTGCACCAACAACGGAACCTGTAACCCCATTGACAGATCTTGTCAGTGTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000506709.1
CDS CCA 90 bp CAATTAATCCAGATAAACAGGAGCATCTGTCTCACCAGTCCATCCTaGCCAGATTATCCAGTGCCAGTCCATCATGTAGGTTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: QLIQINRSICLTSPS*PDYPVPVHHVGSFS
Trigger: AGAGAAGGAACCTACATGATGGACTGGCACTGGATAATCTGGCCAGGATGGACTGGTGAGACAGATGCTCCTGTTTATCTGGATTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515622.1
CDS CCA 90 bp TGGCTAGTGGGGTATTGCCCTCTGTTGGGAAGAAGGGCTGCCAAATaGCAAGGAGTAAAGATCAGCCCTCAAAAATTCACTTCATTATCT +
Preference number: 5 (lower is better)
Translates to: WLVGYCPLLGRRAAK*QGVKISPQKFTSLS
Trigger: AGATAATGAAGTGAATTTTTGAGGGCTGATCTTTACTCCTTGCCATTTGGCAGCCCTTCTTCCCAACAGAGGGCAATACCCCACTAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515002.1
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACATGGCACTGGCATTCTaGGGAACAGTTCTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNMALAF*GTVLSK
Trigger: TTTGGAAAGAACTGTTCCCAAGAATGCCAGTGCCAT...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGTGGACTGCAATGACATaGGCCTGTGGCAGCATCACA +
Preference number: 5 (lower is better)
Translates to: QFTPLETKEALNIFQGAEWTAMT*ACGSIT
Trigger: TGTGATGCTGCCACAGGCCAATGTCATTGCAGTCCA...CTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCCGTGCCAGCCTGCCTaGCAAGTACAAGACCCGTCC +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWPCQPA*QVQDPS
Trigger: GGACGGGTCTTGTACTTGCAAGGCAGGCTGGCACGG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCTTGCAGGCTCCCCCGTaGAGGCACTGGCATGTTAAG +
Preference number: 5 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSLQAPP*RHWHVK
Trigger: CTTAACATGCCAGTGCCTCAACGGGGGAGCCTGCAA...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCTGGGACACACTTCATaGCAGAGGGCGCCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSLGHTS*QRAPVK
Trigger: CTTCACAGGCGCCCTCTGCAATGAAGTGTGTCCCAG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTTTACAGGTTCCGTTGTaGGTGCAGGTACAAATTCCT +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFLQVPL*VQVQIP
Trigger: AGGAATTTGTACCTGCACCAACAACGGAACCTGTAA...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTAGCTCCGTTTTGACATaGGCATATCAGTGCACAATC +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFSSVLT*AYQCTI
Trigger: GATTGTGCACTGATATGCCAATGTCAAAACGGAGCT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTTATGATAACACCAGCTaGATCACATCTCGCTCCCTT +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFYDNTS*ITSRSL
Trigger: AAGGGAGCGAGATGTGATCAAGCTGGTGTTATCATA...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCTCTGCCTGGCACATTaGTGTATTGACTTCTGCAAT +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFLCLAH*CIDFCN
Trigger: ATTGCAGAAGTCAATACACAAATGTGCCAGGCAGAG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTAACTCCTTTACTGCTTaGACCACCATGGGATACAGA +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFNSFTA*TTMGYR
Trigger: TCTGTATCCCATGGTGGTCAAAGCAGTAAAGGAGTT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGCTCGTGTAGTAAATTaGATCAAAGGGATGTGGGTA +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNARVVN*IKGMWV
Trigger: TACCCACATCCCTTTGATCAAATTTACTACACGAGC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCACAGAGCCCCATTTTaGCACTGGCACCGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWHRAPF*HWHRLV
Trigger: CACCAGCCGGTGCCAGTGCAAAAATGGGGCTCTGTG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CAGTTCATCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCATTGCAGGCTCCCCCGTaGAGGCACTGGCATGTTAAG +
Preference number: 5 (lower is better)
Translates to: QFISVYSFRNQRSSQHFPLQAPP*RHWHVK
Trigger: CTTAACATGCCAGTGCCTCAACGGGGGAGCCTGCAA...TGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGATGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGCTGAAGTTGAGTTATaGATCTCTGCATATGGGGAA +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNAEVEL*ISAYGE
Trigger: TTCCCCATATGCAGAGATCAATAACTCAACTTCAGC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGTTCATGTCCAAAAATaGCCCACCGAATTGACTAAC +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFVHVQK*PTELTN
Trigger: GTTAGTCAATTCGGTGGGCAATTTTTGGACATGAAC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CATGTCTCAATTAGATGCCTATCACCTAGAGTTGGGAGCCAGCCAGTGGTTAACGTTCATGTCCAAAAATaGCCCACCGAATTGACTAAC +
Preference number: 5 (lower is better)
Translates to: HVSIRCLSPRVGSQPVVNVHVQK*PTELTN
Trigger: GTTAGTCAATTCGGTGGGCAATTTTTGGACATGAAC...GTTAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGCATCTAATTGAGACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCAAGAGTGTCCCAGTTaGGATGGTCAATTCTATGAT +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFQECPS*DGQFYD
Trigger: ATCATAGAATTGACCATCCAAACTGGGACACTCTTG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGACACTACACACTACTGAAGAGGTaGCTGGTGACATCCCATGTT +
Preference number: 5 (lower is better)
Translates to: PLETKEALNIFQGAERHYTLLKR*LVTSHV
Trigger: AACATGGGATGTCACCAGCAACCTCTTCAGTAGTGT...GTAGTGTCTCTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp GTGGAAATTAACATATTGATGTTACCATTCACATGGAAATTCAAGGACCCAGAATTGCAGGCTCCCCCGTaGAGGCACTGGCATGTTAAG +
Preference number: 5 (lower is better)
Translates to: VEINILMLPFTWKFKDPELQAPP*RHWHVK
Trigger: CTTAACATGCCAGTGCCTCAACGGGGGAGCCTGCAA...TTCTGGGTCCTTGAATTTCCATGTGAATGGTAACATCAATATGTTAATTTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGTCAGCATTCTCATATaGCAAGATAAGTCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFVSILI*QDKSGL
Trigger: CAAACCAGACTTATCTTGCAATATGAGAATGCTGAC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTGTTGCACATACGTATTaGTTAACTGACTCACTGAGA +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFVAHTY*LTDSLR
Trigger: TCTCAGTGAGTCAGTTAACAAATACGTATGTGCAAC...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TGCTCCCCTTCTCCCTGGTTTAACCAAGGCTCAGCACCAACAGATCAAAAGGAATTCCTTGAATTGACTTaGGAGTTCCTCAAAATGAAC +
Preference number: 5 (lower is better)
Translates to: CSPSPWFNQGSAPTDQKEFLELT*EFLKMN
Trigger: GTTCATTTTGAGGAACTCCAAAGTCAATTCAAGGAA...TTCCTTTTGATCTGTTGGTGCTGAGCCTTGGTTAAACCAGGGAGAAGGGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTAAGTTGCTGTTGCCTTaGTACAGCAAGCTTTCAATT +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFKLLLP*YSKLSI
Trigger: AATTGAAAGCTTGCTGTACAAAGGCAACAGCAACTT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCCACGTAATTCACACTaGCATATGCATGTACACTTT +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFPRNSH*HMHVHF
Trigger: AAAGTGTACATGCATATGCAAGTGTGAATTACGTGG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGAGAAGAAAGCAATCTTaGGGAGTCTTCTTTCAGGCG +
Preference number: 5 (lower is better)
Translates to: QFTPLETKEALNIFQGAERRKQS*GVFFQA
Trigger: CGCCTGAAAGAAGACTCCCAAAGATTGCTTTCTTCT...CTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCCAGGTCCAGAGATCTaGAGAATCGCAGCGCAACCT +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWPGPEI*RIAAQP
Trigger: AGGTTGCGCTGCGATTCTCAAGATCTCTGGACCTGG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTGAGATGGCACTGGCATTCTaGGGAACAGTTCTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: QFTPLETKEALNIFQGAEMALAF*GTVLSK
Trigger: TTTGGAAAGAACTGTTCCCAAGAATGCCAGTGCCAT...CTCAGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp CAGTTCATCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAGAGCAGTCAATTCCTTaGAATCCTGGGGCACAGGTG +
Preference number: 5 (lower is better)
Translates to: QFISVYSFRNQRSSQHFPEQSIP*NPGAQV
Trigger: CACCTGTGCCCCAGGATTCAAAGGAATTGACTGCTC...TGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGATGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGGCAGGTGGACATGGTaGAGAGCAGTCACTGCCAAT +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWGRWTW*RAVTAN
Trigger: ATTGGCAGTGACTGCTCTCAACCATGTCCACCTGCC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGCAGTCAGCTCCGTTTaGACATTGGCATATCAGTGC +
Preference number: 5 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSAVSSV*TLAYQC
Trigger: GCACTGATATGCCAATGTCAAAACGGAGCTGACTGC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTAAATTGCCCACCGAATaGACTAACATTCACATGAAA +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFKLPTE*TNIHMK
Trigger: TTTCATGTGAATGTTAGTCAATTCGGTGGGCAATTT...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATCCACCTGAACAAAAAGCACCTACAGTCCGTGTCAGCCTCAGCTTTCAGCTTTCCTTATTTCCTTGAATaGACTTTGGAGTTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: IHLNKKHLQSVSASAFSFPYFLE*TLEFLK
Trigger: TTTGAGGAACTCCAAAGTCAATTCAAGGAAATAAGG...AAAGCTGAAAGCTGAGGCTGACACGGACTGTAGGTGCTTTTTGTTCAGGTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGCCTATCACCTAGAGTaGGGAGCCAGCCAGTGGTTA +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWAYHLE*GASQWL
Trigger: TAACCACTGGCTGGCTCCCAACTCTAGGTGATAGGC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS TCA 90 bp TCTAAACAACTTCATAGACATTCCTGTTGGCTGAAGTTGAGTTATTaGTCTCTGCATATGGGGAATCTCTTCGTGCCGGCGATTTCATCT +
Preference number: 5 (lower is better)
Translates to: SKQLHRHSCWLKLSY*SLHMGNLFVPAISS
Trigger: AGATGAAATCGCCGGCACGAAGAGATTCCCCATATGCAGAGATCAATAACTCAACTTCAGCCAACAGGAATGTCTATGAAGTTGTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515622.1
CDS-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGGGTTACAGGTTCCGTaGTTGGTGCAGGTACAAATT +
Preference number: 5 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSGLQVP*LVQVQI
Trigger: AATTTGTACCTGCACCAACAACGGAACCTGTAACCC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGGATGTGACTGTTCTTaGGGAGGTCATATGGATCCT +
Preference number: 5 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSGCDCS*GGHMDP
Trigger: AGGATCCATATGACCTCCCAAAGAACAGTCACATCC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAGCTACTGTGGCTCTTaGGGGGTCAAGATGACCACA +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWSYCGS*GVKMTT
Trigger: TGTGGTCATCTTGACCCCCAAAGAGCCACAGTAGCT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCAGAAGAAAGCAATCTTaGGGAGTCTTCTTTCAGGCG +
Preference number: 5 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSRRKQS*GVFFQA
Trigger: CGCCTGAAAGAAGACTCCCAAAGATTGCTTTCTTCT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp CTACTGAAGAGGTTGCTGGTGACATCCCATGTTTATGAATCTGAAGACTTCATAGCTCGTGTAGTAAATTaGATCAAAGGGATGTGGGTA +
Preference number: 5 (lower is better)
Translates to: LLKRLLVTSHVYESEDFIARVVN*IKGMWV
Trigger: TACCCACATCCCTTTGATCAAATTTACTACACGAGC...TATGAAGTCTTCAGATTCATAAACATGGGATGTCACCAGCAACCTCTTCAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGCACACTGACAGGTGTTaGGAGCAATACAGCGACCAT +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWHTDRC*EQYSDH
Trigger: ATGGTCGCTGTATTGCTCCAAACACCTGTCAGTGTG...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp GTGGAAATTAACATATTGATGTTACCATTCACATGGAAATTCAAGGACCCAGAACACACTGACAGGTGTTaGGAGCAATACAGCGACCAT +
Preference number: 5 (lower is better)
Translates to: VEINILMLPFTWKFKDPEHTDRC*EQYSDH
Trigger: ATGGTCGCTGTATTGCTCCAAACACCTGTCAGTGTG...TTCTGGGTCCTTGAATTTCCATGTGAATGGTAACATCAATATGTTAATTTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCATGGCACTGGCATTCTaGGGAACAGTTCTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSMALAF*GTVLSK
Trigger: TTTGGAAAGAACTGTTCCCAAGAATGCCAGTGCCAT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCTATGATAACACCAGCTaGATCACATCTCGCTCCCTT +
Preference number: 5 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSYDNTS*ITSRSL
Trigger: AAGGGAGCGAGATGTGATCAAGCTGGTGTTATCATA...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TCCCATGTTTATGAATCTGAAGACTTCATATTGTTAAGTGGACAGTATTCCCCAACACTACTGAAGAGGTaGCTGGTGACATCCCATGTT +
Preference number: 5 (lower is better)
Translates to: SHVYESEDFILLSGQYSPTLLKR*LVTSHV
Trigger: AACATGGGATGTCACCAGCAACCTCTTCAGTAGTGT...TGGGGAATACTGTCCACTTAACAATATGAAGTCTTCAGATTCATAAACATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTGGTCGCAGGTGGAGTaGTTCAGACAATCACATATC +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWWSQVE*FRQSHI
Trigger: GATATGTGATTGTCTGAACAACTCCACCTGCGACCA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGGATGTGACTGTTCTTaGGGAGGTCATATGGATCCT +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWGCDCS*GGHMDP
Trigger: AGGATCCATATGACCTCCCAAAGAACAGTCACATCC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCACTGGCTTTCCTGCATaGTGTCAGCATTCTCATATT +
Preference number: 5 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSTGFPA*CQHSHI
Trigger: AATATGAGAATGCTGACACAATGCAGGAAAGCCAGT...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGTACTTGCTGCAAACTaGAACAAGGTTTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSVLAAN*NKVFSV
Trigger: GACAGAGAAAACCTTGTTCAAGTTTGCAGCAAGTAC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503335.7
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAGAAGAAAGCAATCTTaGGGAGTCTTCTTTCAGGCG +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWRRKQS*GVFFQA
Trigger: CGCCTGAAAGAAGACTCCCAAAGATTGCTTTCTTCT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTTACAGGTTCCGTTGTaGGTGCAGGTACAAATTCCT +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWLQVPL*VQVQIP
Trigger: AGGAATTTGTACCTGCACCAACAACGGAACCTGTAA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGATTGCTGAATACTCCTaGGACAACACTCACTGTAGG +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWIAEYS*DNTHCR
Trigger: CCTACAGTGAGTGTTGTCCAAGGAGTATTCAGCAAT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCGTCAGCATTCTCATATaGCAAGATAAGTCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSVSILI*QDKSGL
Trigger: CAAACCAGACTTATCTTGCAATATGAGAATGCTGAC...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TCTCAGTTTACTCCTTTAGAAACCAAAGAAGCTCTCAACATTTTCCAAGGGGCTTCTGAAGACTTCATATaGTTAAGTGGACAGTATTCC +
Preference number: 5 (lower is better)
Translates to: SQFTPLETKEALNIFQGASEDFI*LSGQYS
Trigger: GGAATACTGTCCACTTAACAATATGAAGTCTTCAGA...AGCCCCTTGGAAAATGTTGAGAGCTTCTTTGGTTTCTAAAGGAGTAAACTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp CTACTGAAGAGGTTGCTGGTGACATCCCATGTTTATGAATCTGAAGACTTCATATCTGAAGACTTCATATaGTTAAGTGGACAGTATTCC +
Preference number: 5 (lower is better)
Translates to: LLKRLLVTSHVYESEDFISEDFI*LSGQYS
Trigger: GGAATACTGTCCACTTAACAATATGAAGTCTTCAGA...TATGAAGTCTTCAGATTCATAAACATGGGATGTCACCAGCAACCTCTTCAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS-3UTR CAA 90 bp CTACTGAAGAGGTTGCTGGTGACATCCCATGTTTATGAATCTGAAGACTTCATAAAGTTATCTCAGGTTTaGCAAGTCAAGATGGAACTA +
Preference number: 5 (lower is better)
Translates to: LLKRLLVTSHVYESEDFIKLSQV*QVKMEL
Trigger: TAGTTCCATCTTGACTTGCAAAACCTGAGATAACTT...TATGAAGTCTTCAGATTCATAAACATGGGATGTCACCAGCAACCTCTTCAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508365.5
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGCTCGTGTAGTAAATTaGATCAAAGGGATGTGGGTA +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWARVVN*IKGMWV
Trigger: TACCCACATCCCTTTGATCAAATTTACTACACGAGC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGGCTGAAGTTGAGTTATaGATCTCTGCATATGGGGAA +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWAEVEL*ISAYGE
Trigger: TTCCCCATATGCAGAGATCAATAACTCAACTTCAGC...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGACTGGCTTTCCTGCATaGTGTCAGCATTCTCATATT +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWTGFPA*CQHSHI
Trigger: AATATGAGAATGCTGACACAATGCAGGAAAGCCAGT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp TTCACGGGTATAGTTCTAAAACTAACAGCAATGGGAAATCACATCTCTAACTCCCCTTATTTCCTTGAATaGACTTTGGAGTTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: FTGIVLKLTAMGNHISNSPYFLE*TLEFLK
Trigger: TTTGAGGAACTCCAAAGTCAATTCAAGGAAATAAGG...GGAGTTAGAGATGTGATTTCCCATTGCTGTTAGTTTTAGAACTATACCCGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAAGTTGCTGTTGCCTTaGTACAGCAAGCTTTCAATT +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWKLLLP*YSKLSI
Trigger: AATTGAAAGCTTGCTGTACAAAGGCAACAGCAACTT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGAAATTGCCCACCGAATaGACTAACATTCACATGAAA +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWKLPTE*TNIHMK
Trigger: TTTCATGTGAATGTTAGTCAATTCGGTGGGCAATTT...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS-3UTR CAA 90 bp ATGGATTTGGTTCAGTCAGGTTATAACTGTCCTATTATAAAGTTCTATGGTTGGTTCCTTGAATTGACTTaGGAGTTCCTCAAAATGAAC +
Preference number: 5 (lower is better)
Translates to: MDLVQSGYNCPIIKFYGWFLELT*EFLKMN
Trigger: GTTCATTTTGAGGAACTCCAAAGTCAATTCAAGGAA...CCAACCATAGAACTTTATAATAGGACAGTTATAACCTGACTGAACCAAATCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS CCA 72 bp GGGGAGCAGACTGACCATCCGGGGAGGCAGCGGCAATaGCCCGTGGTAGGGTGGCAGCCATCTGCGTGGCTG +
Preference number: 6 (lower is better)
Translates to: GEQTDHPGRQRQ*PVVGWQPSAWL
Trigger: CAGCCACGCAGATGGCTGCCACCCTACCACGGGCCATTGCCGCTGCCTCCCCGGATGGTCAGTCTGCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506709.1
CDS CCA 72 bp CAGTGGACACCTGACCATCCGGGGAGGCAGCGGCAATaGCCCGTGGTAGGGTGGCAGCCATCTGCGTGGCTG +
Preference number: 6 (lower is better)
Translates to: QWTPDHPGRQRQ*PVVGWQPSAWL
Trigger: CAGCCACGCAGATGGCTGCCACCCTACCACGGGCCATTGCCGCTGCCTCCCCGGATGGTCAGGTGTCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS GCA 72 bp GTTCGCATTTCTCCCCGCGCCATCCAGGTGCACACGTaGAGGTCCCGTCCAGGGTGTTGCAGGCTCCCCCGT +
Preference number: 6 (lower is better)
Translates to: VRISPRAIQVHT*RSRPGCCRLPR
Trigger: ACGGGGGAGCCTGCAACACCCTGGACGGGACCTGCACGTGTGCACCTGGATGGCGCGGGGAGAAATGCGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS GCA 72 bp GCAGGGAAGTTCGCATTTCTCCCCGCGCCATCCAGGTaGACACGTGCAGGTCCCGTCCAGGGTGTTGCAGGC +
Preference number: 6 (lower is better)
Translates to: AGKFAFLPAPSR*TRAGPVQGVAG
Trigger: GCCTGCAACACCCTGGACGGGACCTGCACGTGTGCACCTGGATGGCGCGGGGAGAAATGCGAACTTCCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS GCA 72 bp GGCACTGGCATCTCTGATGACAGTCGTTACCATAGGTaGCCTGCTCACAGCGGTCCTCGCAGCGCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: GTGISDDSRYHR*PAHSGPRSASP
Trigger: GGGGCTGGCGCTGCGAGGACCGCTGTGAGCAGGGCACCTATGGTAACGACTGTCATCAGAGATGCCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CCA 72 bp CAAAACAATCCTGACCATCCGGGGAGGCAGCGGCAATaGCCCGTGGTAGGGTGGCAGCCATCTGCGTGGCTG +
Preference number: 6 (lower is better)
Translates to: QNNPDHPGRQRQ*PVVGWQPSAWL
Trigger: CAGCCACGCAGATGGCTGCCACCCTACCACGGGCCATTGCCGCTGCCTCCCCGGATGGTCAGGATTGTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418761.6
ENST00000508365.5
CDS CAA 90 bp TCCCCGCGCCATCCAGGTGCACACGTGCAGGTCCCGTCCAGGGTGTaGCAGGCTCCCCCGTTGAGGCACTGGCATGTTAAGTTACAGCCA +
Preference number: 6 (lower is better)
Translates to: SPRHPGAHVQVPSRV*QAPPLRHWHVKLQP
Trigger: TGGCTGTAACTTAACATGCCAGTGCCTCAACGGGGGAGCCTGCAACACCCTGGACGGGACCTGCACGTGTGCACCTGGATGGCGCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS GCA 72 bp AGCCGCCATGTTTCCAGTCAGCCGGCAATGTCCCAGTaGAGTCCCCCACAGGGCCTCTCTTCCCAGGGTTCA +
Preference number: 6 (lower is better)
Translates to: SRHVSSQPAMSQ*SPPQGLSSQGS
Trigger: TGAACCCTGGGAAGAGAGGCCCTGTGGGGGACTGCACTGGGACATTGCCGGCTGACTGGAAACATGGCGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000510828.5
ENST00000515622.1
CDS CAA 72 bp CATCCAGGTGCACACGTGCAGGTCCCGTCCAGGGTGTaGCAGGCTCCCCCGTTGAGGCACTGGCATGTTAAG +
Preference number: 6 (lower is better)
Translates to: HPGAHVQVPSRV*QAPPLRHWHVK
Trigger: CTTAACATGCCAGTGCCTCAACGGGGGAGCCTGCAACACCCTGGACGGGACCTGCACGTGTGCACCTGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CAA 90 bp GGTGCACACGTGCAGGTCCCGTCCAGGGTGTTGCAGGCTCCCCCGTaGAGGCACTGGCATGTTAAGTTACAGCCAAAGCCCCATGTGCCA +
Preference number: 6 (lower is better)
Translates to: GAHVQVPSRVLQAPP*RHWHVKLQPKPHVP
Trigger: TGGCACATGGGGCTTTGGCTGTAACTTAACATGCCAGTGCCTCAACGGGGGAGCCTGCAACACCCTGGACGGGACCTGCACGTGTGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS TCA 72 bp TGCAGGTCCCGTCCAGGGTGTTGCAGGCTCCCCCGTTaGGGCACTGGCATGTTAAGTTACAGCCAAAGCCCC +
Preference number: 6 (lower is better)
Translates to: CRSRPGCCRLPR*GTGMLSYSQSP
Trigger: GGGGCTTTGGCTGTAACTTAACATGCCAGTGCCTCAACGGGGGAGCCTGCAACACCCTGGACGGGACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS GCA 72 bp GCCCGCTGCTGTGAACGCACTGTGGGCATGTCTGGCTaGAGCGATGCCCATAAAAACCAGGGGAGCAGATCC +
Preference number: 6 (lower is better)
Translates to: ARCCERTVGMSG*SDAHKNQGSRS
Trigger: GGATCTGCTCCCCTGGTTTTTATGGGCATCGCTGCAGCCAGACATGCCCACAGTGCGTTCACAGCAGCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS GCA 72 bp GCCCGCTGCTGTGAACGCACTGTGGGCATGTCTGGCTaGAGCGATGCCCATAAAAACCAGGGGAGCAGACTG +
Preference number: 6 (lower is better)
Translates to: ARCCERTVGMSG*SDAHKNQGSRL
Trigger: CAGTCTGCTCCCCTGGTTTTTATGGGCATCGCTGCAGCCAGACATGCCCACAGTGCGTTCACAGCAGCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506709.1
CDS CCA 72 bp ACAAAGATCCTCACAGAAGGCTCCGGTGTATCCTGGTaGGCAGCGGCATTCCCCCGTGACGTGGTCGCAGGT +
Preference number: 6 (lower is better)
Translates to: TKILTEGSGVSW*AAAFPRDVVAG
Trigger: ACCTGCGACCACGTCACGGGGGAATGCCGCTGCCCACCAGGATACACCGGAGCCTTCTGTGAGGATCTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CAA 72 bp GTGCAGGTCCCGTCCAGGGTGTTGCAGGCTCCCCCGTaGAGGCACTGGCATGTTAAGTTACAGCCAAAGCCC +
Preference number: 6 (lower is better)
Translates to: VQVPSRVLQAPP*RHWHVKLQPKP
Trigger: GGGCTTTGGCTGTAACTTAACATGCCAGTGCCTCAACGGGGGAGCCTGCAACACCCTGGACGGGACCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CCA 72 bp CCGTCCAGGGTGTTGCAGGCTCCCCCGTTGAGGCACTaGCATGTTAAGTTACAGCCAAAGCCCCATGTGCCA +
Preference number: 6 (lower is better)
Translates to: PSRVLQAPPLRH*HVKLQPKPHVP
Trigger: TGGCACATGGGGCTTTGGCTGTAACTTAACATGCCAGTGCCTCAACGGGGGAGCCTGCAACACCCTGGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CAA 90 bp GCCTGTGGCAGCATCACACGTCCCTCCATTATGGCACTGGCATTCTaGGGAACAGTTCTTTCCAAAGCGACCCTCGGGGCAAGGCTGACC +
Preference number: 6 (lower is better)
Translates to: ACGSITRPSIMALAF*GTVLSKATLGARLT
Trigger: GGTCAGCCTTGCCCCGAGGGTCGCTTTGGAAAGAACTGTTCCCAAGAATGCCAGTGCCATAATGGAGGGACGTGTGATGCTGCCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CAA 90 bp CGCTGCAGAAAGCTCCATTATGGCAGTTGCACGTGTGGATGCAGTTaGGGCCCCAGTGGGCAGGTGGACATGGTTGAGAGCAGTCACTGC +
Preference number: 6 (lower is better)
Translates to: RCRKLHYGSCTCGCS*GPSGQVDMVESSHC
Trigger: GCAGTGACTGCTCTCAACCATGTCCACCTGCCCACTGGGGCCCAAACTGCATCCACACGTGCAACTGCCATAATGGAGCTTTCTGCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000506709.1
CDS GCA 72 bp CATCGTAGGCGCTGCAGAAAGCTCCATTATGGCAGTTaGACGTGTGGATGCAGTTTGGGCCCCAGTGGGCAG +
Preference number: 6 (lower is better)
Translates to: HRRRCRKLHYGS*TCGCSLGPSGQ
Trigger: CTGCCCACTGGGGCCCAAACTGCATCCACACGTGCAACTGCCATAATGGAGCTTTCTGCAGCGCCTACGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000506709.1
CDS GCA 72 bp CTGCTGCTGTTGCTGCTGCTACCACCACTGTCCTCTTaGTTAGGGGAGGATGAACTGTCTCGGACTGGCAGC +
Preference number: 6 (lower is better)
Translates to: LLLLLLLPPLSS*LGEDELSRTGS
Trigger: GCTGCCAGTCCGAGACAGTTCATCCTCCCCTAAGCAAGAGGACAGTGGTGGTAGCAGCAGCAACAGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS CCA 72 bp GCGCTGCAGAAAGCTCCATTATGGCAGTTGCACGTGTaGATGCAGTTTGGGCCCCAGTGGGCAGGTGGACAT +
Preference number: 6 (lower is better)
Translates to: ALQKAPLWQLHV*MQFGPQWAGGH
Trigger: ATGTCCACCTGCCCACTGGGGCCCAAACTGCATCCACACGTGCAACTGCCATAATGGAGCTTTCTGCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000506709.1
CDS CAA 90 bp CTCATCCTGGCACCGTTCCCCTGTGTATCCTGGACTGCAATGACATaGGCCTGTGGCAGCATCACACGTCCCTCCATTATGGCACTGGCA +
Preference number: 6 (lower is better)
Translates to: LILAPFPCVSWTAMT*ACGSITRPSIMALA
Trigger: TGCCAGTGCCATAATGGAGGGACGTGTGATGCTGCCACAGGCCAATGTCATTGCAGTCCAGGATACACAGGGGAACGGTGCCAGGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS GCA 72 bp ACTCATCCTGGCACCGTTCCCCTGTGTATCCTGGACTaGAATGACATTGGCCTGTGGCAGCATCACACGTCC +
Preference number: 6 (lower is better)
Translates to: THPGTVPLCILD*NDIGLWQHHTS
Trigger: GGACGTGTGATGCTGCCACAGGCCAATGTCATTGCAGTCCAGGATACACAGGGGAACGGTGCCAGGATGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS GCA 72 bp CCAGTGGCTACCAAGCGGTCCTTTGGTGTCATTCACTaGTGCTGCTGCTGTTGCTGCTGCTACCACCACTGT +
Preference number: 6 (lower is better)
Translates to: PVATKRSFGVIH*CCCCCCCYHHC
Trigger: ACAGTGGTGGTAGCAGCAGCAACAGCAGCAGCAGCAGTGAATGACACCAAAGGACCGCTTGGTAGCCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS CCA 72 bp CCCCTGTGTATCCTGGACTGCAATGACATTGGCCTGTaGCAGCATCACACGTCCCTCCATTATGGCACTGGC +
Preference number: 6 (lower is better)
Translates to: PLCILDCNDIGL*QHHTSLHYGTG
Trigger: GCCAGTGCCATAATGGAGGGACGTGTGATGCTGCCACAGGCCAATGTCATTGCAGTCCAGGATACACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CCA 72 bp AGCTCCATTATGGCAGTTGCACGTGTGGATGCAGTTTaGGCCCCAGTGGGCAGGTGGACATGGTTGAGAGCA +
Preference number: 6 (lower is better)
Translates to: SSIMAVARVDAV*APVGRWTWLRA
Trigger: TGCTCTCAACCATGTCCACCTGCCCACTGGGGCCCAAACTGCATCCACACGTGCAACTGCCATAATGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000506709.1
CDS CAA 72 bp AAGCTCCATTATGGCAGTTGCACGTGTGGATGCAGTTaGGGCCCCAGTGGGCAGGTGGACATGGTTGAGAGC +
Preference number: 6 (lower is better)
Translates to: KLHYGSCTCGCS*GPSGQVDMVES
Trigger: GCTCTCAACCATGTCCACCTGCCCACTGGGGCCCAAACTGCATCCACACGTGCAACTGCCATAATGGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000506709.1
CDS CCA 72 bp AGGACACTCATCCTGGCACCGTTCCCCTGTGTATCCTaGACTGCAATGACATTGGCCTGTGGCAGCATCACA +
Preference number: 6 (lower is better)
Translates to: RTLILAPFPCVS*TAMTLACGSIT
Trigger: TGTGATGCTGCCACAGGCCAATGTCATTGCAGTCCAGGATACACAGGGGAACGGTGCCAGGATGAGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CCA 72 bp TCTGGAAAGGGTTCCAGTGGCTACCAAGCGGTCCTTTaGTGTCATTCACTGCTGCTGCTGCTGTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SGKGSSGYQAVL*CHSLLLLLLLL
Trigger: CAGCAGCAACAGCAGCAGCAGCAGTGAATGACACCAAAGGACCGCTTGGTAGCCACTGGAACCCTTTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS CAA 72 bp GCACCGTTCCCCTGTGTATCCTGGACTGCAATGACATaGGCCTGTGGCAGCATCACACGTCCCTCCATTATG +
Preference number: 6 (lower is better)
Translates to: APFPCVSWTAMT*ACGSITRPSIM
Trigger: CATAATGGAGGGACGTGTGATGCTGCCACAGGCCAATGTCATTGCAGTCCAGGATACACAGGGGAACGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CAA 90 bp AAACAGCAGTTCTGGAAAGGGTTCCAGTGGCTACCAAGCGGTCCTTaGGTGTCATTCACTGCTGCTGCTGCTGTTGCTGCTGCTACCACC +
Preference number: 6 (lower is better)
Translates to: KQQFWKGFQWLPSGP*VSFTAAAAVAAATT
Trigger: GGTGGTAGCAGCAGCAACAGCAGCAGCAGCAGTGAATGACACCAAAGGACCGCTTGGTAGCCACTGGAACCCTTTCCAGAACTGCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS TCA 72 bp TTCCTGAAGGGCACTTCTGCTCACAGTGCCGTCCCATaGATCCAGTGCGGCAAGTACACTGCCCAGAAATGT +
Preference number: 6 (lower is better)
Translates to: FLKGTSAHSAVP*IQCGKYTAQKC
Trigger: ACATTTCTGGGCAGTGTACTTGCCGCACTGGATTCATGGGACGGCACTGTGAGCAGAAGTGCCCTTCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS TCA 72 bp GCTGCTACCACCACTGTCCTCTTGCTTAGGGGAGGATaGACTGTCTCGGACTGGCAGCAGGTCATAATGACA +
Preference number: 6 (lower is better)
Translates to: AATTTVLLLRGG*TVSDWQQVIMT
Trigger: TGTCATTATGACCTGCTGCCAGTCCGAGACAGTTCATCCTCCCCTAAGCAAGAGGACAGTGGTGGTAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS GCA 72 bp ATGTCTCATTACAGTAGAGTCCTGACCAGCCCGGCTTaGAGGCACACTCTCCAGACATGGGGTGACAGCTAT +
Preference number: 6 (lower is better)
Translates to: MSHYSRVLTSPA*RHTLQTWGDSY
Trigger: ATAGCTGTCACCCCATGTCTGGAGAGTGTGCCTGCAAGCCGGGCTGGTCAGGACTCTACTGTAATGAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CCA 72 bp GCATCACACGTCCCTCCATTATGGCACTGGCATTCTTaGGAACAGTTCTTTCCAAAGCGACCCTCGGGGCAA +
Preference number: 6 (lower is better)
Translates to: ASHVPPLWHWHS*EQFFPKRPSGQ
Trigger: TTGCCCCGAGGGTCGCTTTGGAAAGAACTGTTCCCAAGAATGCCAGTGCCATAATGGAGGGACGTGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CCA 72 bp CCTGTGGCAGCATCACACGTCCCTCCATTATGGCACTaGCATTCTTGGGAACAGTTCTTTCCAAAGCGACCC +
Preference number: 6 (lower is better)
Translates to: PVAASHVPPLWH*HSWEQFFPKRP
Trigger: GGGTCGCTTTGGAAAGAACTGTTCCCAAGAATGCCAGTGCCATAATGGAGGGACGTGTGATGCTGCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CAA 72 bp AGCATCACACGTCCCTCCATTATGGCACTGGCATTCTaGGGAACAGTTCTTTCCAAAGCGACCCTCGGGGCA +
Preference number: 6 (lower is better)
Translates to: SITRPSIMALAF*GTVLSKATLGA
Trigger: TGCCCCGAGGGTCGCTTTGGAAAGAACTGTTCCCAAGAATGCCAGTGCCATAATGGAGGGACGTGTGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CAA 72 bp AGAGGAACGTCTCAACGCGTTCCCAGTCGCCCAGTTTaGCGCACCGGGAAAGTACTTGCTGCAAACTTGAAC +
Preference number: 6 (lower is better)
Translates to: RGTSQRVPSRPV*RTGKVLAANLN
Trigger: GTTCAAGTTTGCAGCAAGTACTTTCCCGGTGCGCAAAACTGGGCGACTGGGAACGCGTTGAGACGTTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503335.7
CDS TCA 72 bp GAATCCAGGAGAACATGTCTCATTACAGTAGAGTCCTaGCCAGCCCGGCTTGCAGGCACACTCTCCAGACAT +
Preference number: 6 (lower is better)
Translates to: ESRRTCLITVES*PARLAGTLSRH
Trigger: ATGTCTGGAGAGTGTGCCTGCAAGCCGGGCTGGTCAGGACTCTACTGTAATGAGACATGTTCTCCTGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS GCA 72 bp AGCCAGGAGTGCATTTACATTCCCCATCGTAGGCGCTaGAGAAAGCTCCATTATGGCAGTTGCACGTGTGGA +
Preference number: 6 (lower is better)
Translates to: SQECIYIPHRRR*RKLHYGSCTCG
Trigger: TCCACACGTGCAACTGCCATAATGGAGCTTTCTGCAGCGCCTACGATGGGGAATGTAAATGCACTCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000506709.1
CDS CAA 90 bp AAGCGGGAAAGAGGAACGTCTCAACGCGTTCCCAGTCGCCCAGTTTaGCGCACCGGGAAAGTACTTGCTGCAAACTTGAACAAGGTTTTC +
Preference number: 6 (lower is better)
Translates to: KRERGTSQRVPSRPV*RTGKVLAANLNKVF
Trigger: GAAAACCTTGTTCAAGTTTGCAGCAAGTACTTTCCCGGTGCGCAAAACTGGGCGACTGGGAACGCGTTGAGACGTTCCTCTTTCCCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503335.7
CDS CAA 90 bp AGGGCAAGAGCATTCTCCAGTGACGTGATGACACACTCCTCCATTTaGACAAGGGCATCTCTGCTCACACTGTGGACCATGTTTACCAGG +
Preference number: 6 (lower is better)
Translates to: RARAFSSDVMTHSSI*TRASLLTLWTMFTR
Trigger: CCTGGTAAACATGGTCCACAGTGTGAGCAGAGATGCCCTTGTCAAAATGGAGGAGTGTGTCATCACGTCACTGGAGAATGCTCTTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CCA 72 bp CATTGGCCTGTGGCAGCATCACACGTCCCTCCATTATaGCACTGGCATTCTTGGGAACAGTTCTTTCCAAAG +
Preference number: 6 (lower is better)
Translates to: HWPVAASHVPPL*HWHSWEQFFPK
Trigger: CTTTGGAAAGAACTGTTCCCAAGAATGCCAGTGCCATAATGGAGGGACGTGTGATGCTGCCACAGGCCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CCA 72 bp AGAGGAACAGTTTATCCCATAGGTTCCCAGAGGGCATaGGGTAGAGCAGTCAATTCCTTTGAATCCTGGGGC +
Preference number: 6 (lower is better)
Translates to: RGTVYPIGSQRA*GRAVNSFESWG
Trigger: GCCCCAGGATTCAAAGGAATTGACTGCTCTACCCCATGCCCTCTGGGAACCTATGGGATAAACTGTTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS GCA 72 bp CTTGCAAGTACAAGACCCGTCCACAGGAGAGCAGACTaGATCATTTTTACAGCCACAGCGAGAGGAACAGTT +
Preference number: 6 (lower is better)
Translates to: LASTRPVHRRAD*IIFTATARGTV
Trigger: AACTGTTCCTCTCGCTGTGGCTGTAAAAATGATGCAGTCTGCTCTCCTGTGGACGGGTCTTGTACTTGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000418761.6
ENST00000503335.7
ENST00000508365.5
CDS CCA 72 bp CAGATAAACAGGAGCATCTGTCTCACCAGTCCATCCTaGCCAGATTATCCAGTGCCAGTCCATCATGTAGGT +
Preference number: 6 (lower is better)
Translates to: QINRSICLTSPS*PDYPVPVHHVG
Trigger: ACCTACATGATGGACTGGCACTGGATAATCTGGCCAGGATGGACTGGTGAGACAGATGCTCCTGTTTATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515622.1
CDS CAA 72 bp GGGAGGTCATATGGATCCTGGGAGAGACGCCCATTATaGCTGAATACTCCTTGGACAACACTCACTGTAGGT +
Preference number: 6 (lower is better)
Translates to: GRSYGSWERRPL*LNTPWTTLTVG
Trigger: ACCTACAGTGAGTGTTGTCCAAGGAGTATTCAGCAATAATGGGCGTCTCTCCCAGGATCCATATGACCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS GCA 72 bp GTTACAGGTTCCGTTGTTGGTGCAGGTACAAATTCCTaGACAGTTTTTCCCAAATCTGCCACTGGGACACAC +
Preference number: 6 (lower is better)
Translates to: VTGSVVGAGTNS*TVFPKSATGTH
Trigger: GTGTGTCCCAGTGGCAGATTTGGGAAAAACTGTGCAGGAATTTGTACCTGCACCAACAACGGAACCTGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000506709.1
CDS CCA 72 bp GGGTATTGCCCTCTGTTGGGAAGAAGGGCTGCCAAATaGCAAGGAGTAAAGATCAGCCCTCAAAAATTCACT +
Preference number: 6 (lower is better)
Translates to: GYCPLLGRRAAK*QGVKISPQKFT
Trigger: AGTGAATTTTTGAGGGCTGATCTTTACTCCTTGCCATTTGGCAGCCCTTCTTCCCAACAGAGGGCAATACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515002.1
CDS CCA 72 bp ATTCCAACATGGGAAGTGCCTGCCAGTAGGAAGGCTTaGAGTTTTCTAACACGAAATGTTTGGCTAGTGGGG +
Preference number: 6 (lower is better)
Translates to: IPTWEVPASRKA*SFLTRNVWLVG
Trigger: CCCCACTAGCCAAACATTTCGTGTTAGAAAACTCCAAGCCTTCCTACTGGCAGGCACTTCCCATGTTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515002.1
CDS CAA 72 bp GAGTTTTCTAACACGAAATGTTTGGCTAGTGGGGTATaGCCCTCTGTTGGGAAGAAGGGCTGCCAAATGGCA +
Preference number: 6 (lower is better)
Translates to: EFSNTKCLASGV*PSVGKKGCQMA
Trigger: TGCCATTTGGCAGCCCTTCTTCCCAACAGAGGGCAATACCCCACTAGCCAAACATTTCGTGTTAGAAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515002.1
CDS CAA 90 bp AGTTTTCTAACACGAAATGTTTGGCTAGTGGGGTATTGCCCTCTGTaGGGAAGAAGGGCTGCCAAATGGCAAGGAGTAAAGATCAGCCCT +
Preference number: 6 (lower is better)
Translates to: SFLTRNVWLVGYCPL*GRRAAKWQGVKISP
Trigger: AGGGCTGATCTTTACTCCTTGCCATTTGGCAGCCCTTCTTCCCAACAGAGGGCAATACCCCACTAGCCAAACATTTCGTGTTAGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515002.1
CDS CAA 90 bp GAAGGCTTGGAGTTTTCTAACACGAAATGTTTGGCTAGTGGGGTATaGCCCTCTGTTGGGAAGAAGGGCTGCCAAATGGCAAGGAGTAAA +
Preference number: 6 (lower is better)
Translates to: EGLEFSNTKCLASGV*PSVGKKGCQMARSK
Trigger: TTTACTCCTTGCCATTTGGCAGCCCTTCTTCCCAACAGAGGGCAATACCCCACTAGCCAAACATTTCGTGTTAGAAAACTCCAAGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515002.1
CDS CAA 90 bp CTGTTCTTTGGGAGGTCATATGGATCCTGGGAGAGACGCCCATTATaGCTGAATACTCCTTGGACAACACTCACTGTAGGTTCAACTTCA +
Preference number: 6 (lower is better)
Translates to: LFFGRSYGSWERRPL*LNTPWTTLTVGSTS
Trigger: TGAAGTTGAACCTACAGTGAGTGTTGTCCAAGGAGTATTCAGCAATAATGGGCGTCTCTCCCAGGATCCATATGACCTCCCAAAGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS TCA 72 bp AATGGATTTGCAATGATAATCCAGGTCCAGAGATCTTaGGAATCGCAGCGCAACCTTTTCTCCCCGGTCTTC +
Preference number: 6 (lower is better)
Translates to: NGFAMIIQVQRS*ESQRNLFSPVF
Trigger: GAAGACCGGGGAGAAAAGGTTGCGCTGCGATTCTCAAGATCTCTGGACCTGGATTATCATTGCAAATCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000418761.6
CDS TCA 72 bp TCGTGCCGGCGATTTCATCTCCACATAACCACACTCTaGGCTTTTCGGGATAAGTACAGGTGGGTCTTTAAT +
Preference number: 6 (lower is better)
Translates to: SCRRFHLHITTL*AFRDKYRWVFN
Trigger: ATTAAAGACCCACCTGTACTTATCCCGAAAAGCTCAGAGTGTGGTTATGTGGAGATGAAATCGCCGGCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000510828.5
ENST00000515622.1
CDS TCA 72 bp CTTCATAGACATTCCTGTTGGCTGAAGTTGAGTTATTaGTCTCTGCATATGGGGAATCTCTTCGTGCCGGCG +
Preference number: 6 (lower is better)
Translates to: LHRHSCWLKLSY*SLHMGNLFVPA
Trigger: CGCCGGCACGAAGAGATTCCCCATATGCAGAGATCAATAACTCAACTTCAGCCAACAGGAATGTCTATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000515622.1
CDS GCA 72 bp AGTTTTCTAACACGAAATGTTTGGCTAGTGGGGTATTaGCCTCTGTTGGGAAGAAGGGCTGCCAAATGGCAA +
Preference number: 6 (lower is better)
Translates to: SFLTRNVWLVGY*PLLGRRAAKWQ
Trigger: TTGCCATTTGGCAGCCCTTCTTCCCAACAGAGGGCAATACCCCACTAGCCAAACATTTCGTGTTAGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515002.1
CDS CCA 72 bp ATGACAAGGGATGTGACTGTTCTTTGGGAGGTCATATaGATCCTGGGAGAGACGCCCATTATTGCTGAATAC +
Preference number: 6 (lower is better)
Translates to: MTRDVTVLWEVI*ILGETPIIAEY
Trigger: GTATTCAGCAATAATGGGCGTCTCTCCCAGGATCCATATGACCTCCCAAAGAACAGTCACATCCCTTGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS CCA 72 bp GACAAGATCTGTCAATGGGGTTACAGGTTCCGTTGTTaGTGCAGGTACAAATTCCTGCACAGTTTTTCCCAA +
Preference number: 6 (lower is better)
Translates to: DKICQWGYRFRC*CRYKFLHSFSQ
Trigger: TTGGGAAAAACTGTGCAGGAATTTGTACCTGCACCAACAACGGAACCTGTAACCCCATTGACAGATCTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000506709.1
CDS CAA 72 bp ACACTGCCCAGAAATGTGGTCGCAGTCAGCTCCGTTTaGACATTGGCATATCAGTGCACAATCTTTTCCATA +
Preference number: 6 (lower is better)
Translates to: TLPRNVVAVSSV*TLAYQCTIFSI
Trigger: TATGGAAAAGATTGTGCACTGATATGCCAATGTCAAAACGGAGCTGACTGCGACCACATTTCTGGGCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000506709.1
CDS CAA 72 bp ATCCTGGGAGAGACGCCCATTATTGCTGAATACTCCTaGGACAACACTCACTGTAGGTTCAACTTCATAGAC +
Preference number: 6 (lower is better)
Translates to: ILGETPIIAEYS*DNTHCRFNFID
Trigger: GTCTATGAAGTTGAACCTACAGTGAGTGTTGTCCAAGGAGTATTCAGCAATAATGGGCGTCTCTCCCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS CAA 90 bp GTCATATGGATCCTGGGAGAGACGCCCATTATTGCTGAATACTCCTaGGACAACACTCACTGTAGGTTCAACTTCATAGACATTCCTGTT +
Preference number: 6 (lower is better)
Translates to: VIWILGETPIIAEYS*DNTHCRFNFIDIPV
Trigger: AACAGGAATGTCTATGAAGTTGAACCTACAGTGAGTGTTGTCCAAGGAGTATTCAGCAATAATGGGCGTCTCTCCCAGGATCCATATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274473.6
ENST00000503335.7
CDS CAA 90 bp TTATCCAGTGCCAGTCCATCATGTAGGTTCCTTCTCTTCTTCCTGTaGCCACTGTCTCTGTCTGGTCTAAACAACTTCATAGACATTCCT +
Preference number: 6 (lower is better)
Translates to: LSSASPSCRFLLFFL*PLSLSGLNNFIDIP
Trigger: AGGAATGTCTATGAAGTTGTTTAGACCAGACAGAGACAGTGGCAACAGGAAGAAGAGAAGGAACCTACATGATGGACTGGCACTGGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515622.1
CDS TCA 72 bp CTAATAAGCCAAGTCCTCTTTAGATCTGGGAAACTCTaGGCTACCAAAATCAGACGTCCTCGATTCCAACAT +
Preference number: 6 (lower is better)
Translates to: LISQVLFRSGKL*ATKIRRPRFQH
Trigger: ATGTTGGAATCGAGGACGTCTGATTTTGGTAGCTCAGAGTTTCCCAGATCTAAAGAGGACTTGGCTTATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515002.1
CDS TCA 72 bp CTTAAGCTTTCAGGCTGCAGTTTTATCATCTATAAATaGGAAAAGAGGCCTCCATGTCACTGCTTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LKLSGCSFIIYK*EKRPPCHCFQL
Trigger: GAGCTGGAAGCAGTGACATGGAGGCCTCTTTTCTCATTTATAGATGATAAAACTGCAGCCTGAAAGCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510513.1
CDS CAA 72 bp CATATGGGTTCTCAGAACTGCTTAGGGAGCAGTTACTaGAATTATATTCAGAATTCTTTCCCAGGTCTTTTA +
Preference number: 6 (lower is better)
Translates to: HMGSQNCLGSSY*NYIQNSFPGLL
Trigger: TAAAAGACCTGGGAAAGAATTCTGAATATAATTCAAGTAACTGCTCCCTAAGCAGTTCTGAGAACCCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274473.6
ENST00000503335.7
ENST00000510828.5
ENST00000515622.1