RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MED13 (Homo sapiens)

Ensembl gene IDs: ENSG00000108510

Ensembl transcript IDs: ENST00000397786.7, ENST00000578132.1, ENST00000581994.1, ENST00000582786.1, ENST00000583958.1

Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTATTCATACAGTGTTAATTCACAGTCCTGATAACTCAATGGCTTaGATAAGAAAGGTATGGCTAGATGTTTCTCACTGGCTGGAAGCA +
Preference number: 1 (lower is better)
Translates to: FIHTVLIHSPDNSMA*IRKVWLDVSHWLEA
Trigger: TGCTTCCAGCCAGTGAGAAACATCTAGCCATACCTTTCTTATGCAAGCCATTGAGTTATCAGGACTGTGAATTAACACTGTATGAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
3UTR-3UTR TCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATACCTTCTTTAGGGAGGTaGGAACCTCCTTGGCATATG +
Preference number: 2 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIPSLGR*EPPWHM
Trigger: CATATGCCAAGGAGGTTCTCACCTCCCTAAAGAAGG...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
3UTR-3UTR TCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAATCACCGGAAATGGCCTaGAATATTAGTCATAGCCCT +
Preference number: 2 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQSPEMA*NISHSP
Trigger: AGGGCTATGACTAATATTTCAGGCCATTTCCGGTGA...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
3UTR-3UTR TCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATATCTGGTGTTTGGGACTaGCATCTCCAAACCAAGAAA +
Preference number: 2 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFISGVWD*HLQTKK
Trigger: TTTCTTGGTTTGGAGATGTCAGTCCCAAACACCAGA...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
3UTR-3UTR TCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGTCTGAAGCCATATGTTaGAATTCATTGTTCCTCATG +
Preference number: 2 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWSEAIC*NSLFLM
Trigger: CATGAGGAACAATGAATTTCAACATATGGCTTCAGA...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
3UTR-3UTR CCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATACCACACACAATGGTATaGACATTATTCCCCCTCTAT +
Preference number: 2 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIPHTMV*TLFPLY
Trigger: ATAGAGGGGGAATAATGTCCATACCATTGTGTGTGG...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397786.7
3UTR-3UTR TCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATAGTATTGAAGGAGGGGTaGATTAAAGTCCCTAAAATT +
Preference number: 2 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIVLKEG*IKVPKI
Trigger: AATTTTAGGGACTTTAATTCACCCCTCCTTCAATAC...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
3UTR-3UTR GCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCACTGTACATGTACTCTaGAACTACAGCTTAGCTGTA +
Preference number: 2 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFTVHVL*NYSLAV
Trigger: TACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGT...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
3UTR-3UTR CCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACATTCTTTCACCGGAAATaGCCTGAAATATTAGTCATA +
Preference number: 2 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTFFHRK*PEILVI
Trigger: TATGACTAATATTTCAGGCCATTTCCGGTGAAAGAA...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
3UTR-3UTR CAA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGTATTTACACCACAGTTaGATTGCGCGCACACACACA +
Preference number: 3 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWYLHHS*IARTHT
Trigger: TGTGTGTGTGCGCGCAATCAAACTGTGGTGTAAATA...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
3UTR CCA 72 bp CATTTCCTCAATCACAATTTGTACAACTCAGTGTTATaGCATTCGGCAGCAATAGTGTTTGTTCCTTATTCT +
Preference number: 3 (lower is better)
Translates to: HFLNHNLYNSVL*HSAAIVFVPYS
Trigger: AGAATAAGGAACAAACACTATTGCTGCCGAATGCCATAACACTGAGTTGTACAAATTGTGATTGAGGAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACAGATGGAGGACGGGCATaGCTAGTAGGGCGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTDGGRA*LVGRGA
Trigger: TGCTCCACGCCCTACTAGTCATGCCCGTCCTCCATC...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACAGACAATCTTCCAGGCTaGCCCCGTTCGGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTDNLPG*PRSARR
Trigger: CCTTCGTGCCGAACGGGGCCAGCCTGGAAGATTGTC...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAATGGGGGTGGTTGAGGTaGATTTGCCATTTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQWGWLR*ICHFGA
Trigger: GGCACCGAAATGGCAAATTCACCTCAACCACCCCCA...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACAGCCGATCAGTACTCTaGCCCTTGCCCGCATCACCT +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHSRSVL*PLPASP
Trigger: AGGTGATGCGGGCAAGGGTCAGAGTACTGATCGGCT...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGCTCGTCAGATTGCACTaGAGGCACGTGGAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWLVRLH*RHVEVQ
Trigger: TTGCACCTCCACGTGCCTTCAGTGCAATCTGACGAG...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAAGCCTTGCGGCTCCATTaGCACCAAGCAAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQALRLH*HQASTE
Trigger: CTCAGTGCTTGCTTGGTGGCAATGGAGCCGCAAGGC...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACCAGTACTCTGACCCTTaGCCGCATCACCTCCATGGG +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHQYSDP*PHHLHG
Trigger: CCCATGGAGGTGATGCGGGCAAGGGTCAGAGTACTG...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGAGTGGCCTCCGACACTaGGTAAAGGCCGAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWSGLRH*VKAEKA
Trigger: GGCTTTTTCGGCCTTTACCCAGTGTCGGAGGCCACT...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAACATGAGCGTCTGTCCTaGGTTGCAGGGTCACAGGTT +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQHERLS*VAGSQV
Trigger: AACCTGTGACCCTGCAACCCAGGACAGACGCTCATG...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp CCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCCACTGGGGGTGGTTGAGGTaGATTTGCCATTTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: PTLNPILSPSIKNLHHFHWGWLR*ICHFGA
Trigger: GGCACCGAAATGGCAAATTCACCTCAACCACCCCCA...GTGGAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR TCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACACCACATCACAAGGGTaGGGACTAAGTGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHTTSQG*GLSGGG
Trigger: ACCACCCCCACTTAGTCCTCACCCTTGTGATGTGGT...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACATGGAGTCCTTGGAGTTaGAAACCGAGGGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTWSPWS*KPRGGW
Trigger: CCATCCACCCCTCGGTTTCCAACTCCAAGGACTCCA...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAAAGTCCTTGGAGTCCTTaGAGTTGGAAACCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQSPWSP*SWKPRG
Trigger: ACCCCTCGGTTTCCAACTCCAAGGACTCCAAGGACT...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGACCCAAGCAAGAAGATaGACAGTGAGTGGATCCCAC +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWTQARR*TVSGSH
Trigger: GTGGGATCCACTCACTGTTCATCTTCTTGCTTGGGT...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACACAAGTGAGAGGACCCTaGACACCCCAAGGTCTTACT +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTQVRGP*TPQGLT
Trigger: AGTAAGACCTTGGGGTGTTCAGGGTCCTCTCACTTG...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATAAGCAGCTCGTCAGATTaGACTGAAGGCACGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFISSSSD*TEGTWR
Trigger: CCTCCACGTGCCTTCAGTGCAATCTGACGAGCTGCT...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAAGTGGAAGCAGGCACTTaGTGGACACCCAAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQVEAGT*WTPKQE
Trigger: TTCTTGCTTGGGTGTCCACCAAGTGCCTGCTTCCAC...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGCTCAGGAGACGTAGGTaGTGTAAGCGTAACCGAAGA +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWLRRRR*CKRNRR
Trigger: TCTTCGGTTACGCTTACACCACCTACGTCTCCTGAG...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAATGTGGGGATTGGCAGTaGTTCTGGGGATTCATCAGT +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQCGDWQ*FWGFIS
Trigger: ACTGATGAATCCCCAGAACCACTGCCAATCCCCACA...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACTGCACTGAAGGCACGTaGAGGTGCAAAGAGGCCTTA +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHCTEGT*RCKEAL
Trigger: TAAGGCCTCTTTGCACCTCCACGTGCCTTCAGTGCA...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAACACTTCTGGACAGACTaGGGATCAACTGTTTGGACT +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQHFWTD*GSTVWT
Trigger: AGTCCAAACAGTTGATCCTCAGTCTGTCCAGAAGTG...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp AATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCACCACATCACAAGGGTaGGGACTAAGTGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: NPTLNPILSPSIKNLHHFTTSQG*GLSGGG
Trigger: ACCACCCCCACTTAGTCCTCACCCTTGTGATGTGGT...GAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR TCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACATTACCGTCAGCTGCCTaGGAAAACCATTCTGCTACC +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTLPSAA*ENHSAT
Trigger: GGTAGCAGAATGGTTTTCTCAGGCAGCTGACGGTAA...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACACATCAGGATGCGGCTaGGTGGGAAGTGAAGATGAT +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHTSGCG*VGSEDD
Trigger: ATCATCTTCACTTCCCACTCAGCCGCATCCTGATGT...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGTTGCAGGTGGATACGTaGCTGCATGTGAATCACCAT +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWLQVDT*LHVNHH
Trigger: ATGGTGATTCACATGCAGTCACGTATCCACCTGCAA...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAATGGGAGTGTTTACTGTaGAGCAGCTCGTCAGATTGC +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQWECLL*SSSSDC
Trigger: GCAATCTGACGAGCTGCTTCACAGTAAACACTCCCA...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATAATGAATTGGGAGACATaGGCGTCTGTCCTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIMNWET*ASVLGC
Trigger: GCAACCCAGGACAGACGCTCATGTCTCCCAATTCAT...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGAACAAAATCCCAGGATaGCACTTTAGCAGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWNKIPG*HFSSCR
Trigger: GCGACAGCTGCTAAAGTGGCATCCTGGGATTTTGTT...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAAGAAGCAGGCACTTGGTaGACACCCAAGCAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQEAGTW*TPKQED
Trigger: ATCTTCTTGCTTGGGTGTCCACCAAGTGCCTGCTTC...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGGGGGTAATGAGATCCTaGAGAATGTACAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWGVMRS*RMYRRT
Trigger: GGTTCTCCTGTACATTCTCCAGGATCTCATTACCCC...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCACAGACACACGATGGTaGAAAGGAGTCAAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFTDTRW*KGVKGR
Trigger: ACGCCCCTTGACTCCTTTTCACCATCGTGTGTCTGT...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATACTAAGTGGGGGTGGTTaGGGTGAATTTGCCATTTCG +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFILSGGG*GEFAIS
Trigger: CGAAATGGCAAATTCACCTCAACCACCCCCACTTAG...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACATATTTGACTGAACCTTaGGCACTAGCAGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTYLTEP*ALAGPP
Trigger: TGGTGGACCTGCTAGTGCTCAAGGTTCAGTCAAATA...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAATCGAAGTATATCCTGTaGGCACTGCATACTCACATC +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQSKYIL*ALHTHI
Trigger: GATGTGAGTATGCAGTGCTCACAGGATATACTTCGA...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACACAGTACTCTTGATATaGGGAGGAAGAGTCTGGACC +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHTVLLI*GGRVWT
Trigger: GGTCCAGACTCTTCCTCCTCATATCAAGAGTACTGT...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACTGTTTTCACATTGGTTaGTGTTGGAAGTGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHCFHIG*CWKWPP
Trigger: CGGAGGCCACTTCCAACATCAACCAATGTGAAAACA...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACATTTACACCACAGTTTaGTTGCGCGCACACACACAC +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHIYTTV*LRAHTH
Trigger: GTGTGTGTGTGCGCGCAATCAAACTGTGGTGTAAAT...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGTCTGGTGTTTGGGACTaGCATCTCCAAACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWSGVWD*HLQTKK
Trigger: TTTCTTGGTTTGGAGATGTCAGTCCCAAACACCAGA...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGTGCCATACTGACAATTaGGTACGAATACAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWCHTDN*VRIQLR
Trigger: CCTCAGCTGTATTCGTACTCAATTGTCAGTATGGCA...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp CCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCCACAACAAAATCCCAGGATaGCACTTTAGCAGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: PTLNPILSPSIKNLHHFHNKIPG*HFSSCR
Trigger: GCGACAGCTGCTAAAGTGGCATCCTGGGATTTTGTT...GTGGAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR GCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGTACATAAAGACTGTGTaGTTCAGGGATGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWYIKTV*FRDGRD
Trigger: GTCCCTTCCATCCCTGAAGCACACAGTCTTTATGTA...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACAGGTACACCTATATTGTaGTTCCTGCGTTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTGTPIL*FLRWIW
Trigger: CCAGATCCAACGCAGGAAGCACAATATAGGTGTACC...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGATTGTTACCGTCAGCTaGCTGAGAAAACCATTCTGC +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWIVTVS*LRKPFC
Trigger: GCAGAATGGTTTTCTCAGGCAGCTGACGGTAACAAT...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAAGGTATTTTCCCACCATaGTGGCTAGTACTATCGGAG +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQGIFPP*WLVLSE
Trigger: CTCCGATAGTACTAGCCACCATGGTGGGAAAATACC...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp CCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCCACGGTATTTTCCCACCATaGTGGCTAGTACTATCGGAG +
Preference number: 4 (lower is better)
Translates to: PTLNPILSPSIKNLHHFHGIFPP*WLVLSE
Trigger: CTCCGATAGTACTAGCCACCATGGTGGGAAAATACC...GTGGAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAAATGACTAGTAGGGCGTaGAGCATCTTGCTTGATAGA +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQMTSRA*SILLDR
Trigger: TCTATCAAGCAAGATGCTCCACGCCCTACTAGTCAT...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATATGTGTGCTTCAGGGATaGAAGGGACAGTTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFICVLQG*KGQLQV
Trigger: AACCTGCAACTGTCCCTTCCATCCCTGAAGCACACA...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACAGTGAATCACCATCTGTaGGGATTCCCACTTTATCCC +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTVNHHL*GFPLYP
Trigger: GGGATAAAGTGGGAATCCCCACAGATGGTGATTCAC...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAACTGTTTGTCCTTCACTaGAGCCAGAATAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQLFVLH*SQNKRR
Trigger: CCTCCTTTTATTCTGGCTCCAGTGAAGGACAAACAG...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGAGTATTTGTTGTTGCTaGCCTAAAGATGGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWSICCC*PKDGAC
Trigger: ACAGGCACCATCTTTAGGTCAGCAACAACAAATACT...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp CTTGTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATACAGACACACGATGGTaGAAAGGAGTCAAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: LVNPTLNPILSPSIKNLHTDTRW*KGVKGR
Trigger: ACGCCCCTTGACTCCTTTTCACCATCGTGTGTCTGT...ATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR TCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAATTGACTCTGAGGAGTTaGAGGTGTTTTAGTCACTCC +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQLTLRS*RCFSHS
Trigger: GGAGTGACTAAAACACCTTCAACTCCTCAGAGTCAA...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACCTGACATGTTATCCATaGACTGACGCCCATGTTCTA +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHLTCYP*TDAHVL
Trigger: TAGAACATGGGCGTCAGTTCATGGATAACATGTCAG...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATAATACGTGACTGCATGTaGATCACCATCTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIIRDCM*ITICGD
Trigger: ATCCCCACAGATGGTGATTCACATGCAGTCACGTAT...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACAAGTGGTATAAGTAGCTaGAGCTACTTGCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTSGISS*SYLHRS
Trigger: GCTTCTGTGCAAGTAGCTTCAGCTACTTATACCACT...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACATCACCGGAAATGGCCTaGAATATTAGTCATAGCCCT +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTSPEMA*NISHSP
Trigger: AGGGCTATGACTAATATTTCAGGCCATTTCCGGTGA...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAAGATCTGCAGTGCTTATaGAAGATAACGGGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQDLQCL*KITGPD
Trigger: ATCTGGACCCGTTATCTTGCATAAGCACTGCAGATC...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGGATGGAAGGGACAGTTaGAGGTTCAACAGAATTAAG +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWDGRDS*RFNRIK
Trigger: CTTAATTCTGTTGAACCTGCAACTGTCCCTTCCATC...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAAGACCTAGGTCATATCTaGAGACTTGTGCATAAAGCT +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQDLGHI*RLVHKA
Trigger: AGCTTTATGCACAAGTCTGCAGATATGACCTAGGTC...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGCTCCATATAGATCTGTaGAAGATGCAAGAATCCACC +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWLHIDL*KMQEST
Trigger: GGTGGATTCTTGCATCTTGCACAGATCTATATGGAG...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAAGATACCCATTCCATCTaGTCCATCATTGTTGGGATT +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQDTHSI*SIIVGI
Trigger: AATCCCAACAATGATGGAGCAGATGGAATGGGTATC...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAACAAGGGGGTACAGCCTaGATAAAAGCAGTTATCTTG +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQQGGTA*IKAVIL
Trigger: CAAGATAACTGCTTTTATGCAGGCTGTACCCCCTTG...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAAATTTTCCCACCATGGTaGCTAGTACTATCGGAGTTG +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQIFPPW*LVLSEL
Trigger: CAACTCCGATAGTACTAGCCACCATGGTGGGAAAAT...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCAGTCCGAGGAGTCCTTaGAGTCCTTGGAGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFSPRSP*SPWSWK
Trigger: TTTCCAACTCCAAGGACTCCAAGGACTCCTCGGACT...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACATTGTGCTTCCTGCGTTaGATCTGGAATGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTLCFLR*IWNVNS
Trigger: GGAGTTTACATTCCAGATCCAACGCAGGAAGCACAA...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACATTAGGAAAAGGATCTTaGTCTGCTGCTCCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTLGKGS*SAAPKG
Trigger: ACCCTTTGGAGCAGCAGACCAAGATCCTTTTCCTAA...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAATCACATCGTTTCTTTTaGACCAGGGGTGTAAGCATG +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQSHRFF*TRGVSM
Trigger: CATGCTTACACCCCTGGTCCAAAAGAAACGATGTGA...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAATACAACTCAGTGTTATaGCATTCGGCAGCAATAGTG +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQYNSVL*HSAAIV
Trigger: CACTATTGCTGCCGAATGCCATAACACTGAGTTGTA...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGCTCCTTCAAGCAACATaGGATAGGATAGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWLLQAT*DRIELF
Trigger: AAACAGTTCTATCCTATCTCATGTTGCTTGAAGGAG...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp CTTGTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCTAAGTGGGGGTGGTTaGGGTGAATTTGCCATTTCG +
Preference number: 4 (lower is better)
Translates to: LVNPTLNPILSPSIKNLHLSGGG*GEFAIS
Trigger: CGAAATGGCAAATTCACCTCAACCACCCCCACTTAG...ATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR TCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACAATAAATCAAACTTGTTaGTGGAGGACGGGCATGACT +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTINQTC*WRTGMT
Trigger: AGTCATGCCCGTCCTCCATCAACAAGTTTGATTTAT...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACATGTTATCCATGAACTaGCGCCCATGTTCTAATGCA +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHMLSMN*RPCSNA
Trigger: TGCATTAGAACATGGGCGTCAGTTCATGGATAACAT...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGATCAACTTTTCCTCCTaGCATGTTATCCATGAACTG +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWINFSS*HVIHEL
Trigger: CAGTTCATGGATAACATGTCAGGAGGAAAAGTTGAT...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATAGAAACAGGTCTATGTTaGCCTAATCGACAGGACTCA +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIETGLC*PNRQDS
Trigger: TGAGTCCTGTCGATTAGGTCAACATAGACCTGTTTC...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACCCAGTATTTGTCATCTaGGGTGGAGTAATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHPVFVI*GGVIKD
Trigger: GTCTTTGATTACTCCACCTCAGATGACAAATACTGG...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACGGTTGCAACAGGTACTaGCAAGGAATAATCTGTACA +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHGCNRY*QGIICT
Trigger: TGTACAGATTATTCCTTGTCAGTACCTGTTGCAACC...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAAAACTCTCCATGGCAATaGACTCATTTGTACAAGTCC +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQNSPWQ*THLYKS
Trigger: GGACTTGTACAAATGAGTTCATTGCCATGGAGAGTT...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACATTAGGTACTTCCTCATaGGGTTCTGTTGATAGTAGC +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTLGTSS*GSVDSS
Trigger: GCTACTATCAACAGAACCTCATGAGGAAGTACCTAA...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCAGGACATCTGAAGTCTaGTTTGAGTCAAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFRTSEV*FESSGW
Trigger: CCACCCACTTGACTCAAATCAGACTTCAGATGTCCT...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAAGTTCCAAAACAAACCTaGGGACATCTGAAGTCTGAT +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQVPKQT*GHLKSD
Trigger: ATCAGACTTCAGATGTCCTCAGGTTTGTTTTGGAAC...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATATTCAGCACCACAAAATaGATTGGGAGACATGAGCGT +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIFSTTK*IGRHER
Trigger: ACGCTCATGTCTCCCAATTCATTTTGTGGTGCTGAA...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCCGCCCCTTCATAAAGTaGCCAAGCTATTTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFRPFIK*PSYFER
Trigger: CCTCTCAAAATAGCTTGGTCACTTTATGAAGGGGCG...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGATATCCTGTGAGCACTaGATACTCACATCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWISCEH*ILTSFL
Trigger: AAGAAACGATGTGAGTATGCAGTGCTCACAGGATAT...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAACATTACTGTTCATACTaGCAAAGGGTGGAAACGAAG +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQHYCSY*QRVETK
Trigger: CTTCGTTTCCACCCTTTGGCAGTATGAACAGTAATG...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCATAACAAAAGAGCCTTaGGGCTCCATTGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFITKEP*GSIATK
Trigger: CTTGGTGGCAATGGAGCCGCAAGGCTCTTTTGTTAT...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCGAAGGCACGTGGAGGTaGAAAGAGGCCTTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFEGTWR*KEALRK
Trigger: TTTTCTTAAGGCCTCTTTGCACCTCCACGTGCCTTC...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGACTGAACTTCCACCCTaGTTAATAATCATGGATACC +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWTELPP*LIIMDT
Trigger: GGTATCCATGATTATTAAGCAGGGTGGAAGTTCAGT...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAAACTTCCAGGCTATATTaGCTTCATCTTCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQTSRLY*LHLLPS
Trigger: ACTTGGAAGAAGATGAAGCCAATATAGCCTGGAAGT...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGATAGGGGGCAGATATTaGCTTGGTAGAGTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWIGGRY*LGRVFR
Trigger: TCTAAAAACTCTACCAAGCCAATATCTGCCCCCTAT...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACAGTAAATACACTCTTCTaGCAATTTGATAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTVNTLF*QFDRGQ
Trigger: CTGCCCCCTATCAAATTGCCAGAAGAGTGTATTTAC...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAATTCCTGCGTTGGATCTaGAATGTAAACTCCAACATC +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQFLRWI*NVNSNI
Trigger: GATGTTGGAGTTTACATTCCAGATCCAACGCAGGAA...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATAAACCCAACAAAAATGTaGGGATTGGCAGTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFINPTKM*GLAVVL
Trigger: CAGAACCACTGCCAATCCCCACATTTTTGTTGGGTT...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACCCGACGAGCCCTATTTaGAACATCGATGTTAATGAT +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHPTSPI*NIDVND
Trigger: ATCATTAACATCGATGTTCCAAATAGGGCTCGTCGG...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAACCACACACAATGGTATaGACATTATTCCCCCTCTAT +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQPHTMV*TLFPLY
Trigger: ATAGAGGGGGAATAATGTCCATACCATTGTGTGTGG...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATAATCCTCCACACACAATaGTATGGACATTATTCCCCC +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIILHTQ*YGHYSP
Trigger: GGGGGAATAATGTCCATACCATTGTGTGTGGAGGAT...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCCACTTGGTGGCCTTCTaGCCAAACAATAAGGTGTAC +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFHLVAF*PNNKVY
Trigger: GTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTG...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAAACATATAAGTACACTTaGTGGCCTTCTGGCCAAACA +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQTYKYT*WPSGQT
Trigger: TGTTTGGCCAGAAGGCCACCAAGTGTACTTATATGT...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCGTAGGAATGTCTGACTaGGGGACTAGAACAAAGCAT +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFVGMSD*GTRTKH
Trigger: ATGCTTTGTTCTAGTCCCTCAGTCAGACATTCCTAC...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAAACTCTATCCACCACATaGTTTGCTAATTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQTLSTT*FANFLG
Trigger: ACCCAGAAAATTAGCAAATCATGTGGTGGATAGAGT...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACTTGTCCAGCATTTCTTaGCTTGAGATTTTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHLSSIS*LEIFVP
Trigger: AGGCACAAAAATCTCAAGTCAAGAAATGCTGGACAA...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp AATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCTTGACTCTGAGGAGTTaGAGGTGTTTTAGTCACTCC +
Preference number: 4 (lower is better)
Translates to: NPTLNPILSPSIKNLHHFLTLRS*RCFSHS
Trigger: GGAGTGACTAAAACACCTTCAACTCCTCAGAGTCAA...GAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR TCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGTTATCACTTGGAAGTTaGGGTGGTAAAAACTCTACA +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWLSLGS*GGKNST
Trigger: TGTAGAGTTTTTACCACCTCAACTTCCAAGTGATAA...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGCAACTGGATCATCCTTaGATTTATCACTTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWQLDHP*IYHLEV
Trigger: AACTTCCAAGTGATAAATTCAAGGATGATCCAGTTG...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATAAGAGACAGCCAGGTCTaGGTCATAAATCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIRDSQV*VINQTC
Trigger: ACAAGTTTGATTTATGACTCAGACCTGGCTGTCTCT...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGAATATGTTGTTCCAATaGTGGTGGTGTAGGATACAT +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWNMLFQ*WWCRIH
Trigger: ATGTATCCTACACCACCATCATTGGAACAACATATT...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACGCAGTGCCATATTCTTaGTCCATATTACTTCCATCA +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHAVPYS*SILLPS
Trigger: TGATGGAAGTAATATGGATCAAGAATATGGCACTGC...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAACTGTATTGCGTCCTATaGTATCTAGTTCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQLYCVL*YLVHLQ
Trigger: TTGAAGATGAACTAGATATCATAGGACGCAATACAG...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCAGATATGGCAACACCTaGAGTCACTGTCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFRYGNT*SHCHSA
Trigger: AGCACTATGACAGTGACTTCAGGTGTTGCCATATCT...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCATTAGCTGTGGCAACTaGAGTAGATATGGCAACACC +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFISCGN*SRYGNT
Trigger: GGTGTTGCCATATCTACTTCAGTTGCCACAGCTAAT...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATATCTTTCAATTCTCCATaGCCAATCCTTCCTAGACGA +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFISFNSP*PILPRR
Trigger: TCGTCTAGGAAGGATTGGTCATGGAGAATTGAAAGA...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGAAATACAGAACCAGTTaGCACAGAATCTGGCATAAT +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWKYRTS*HRIWHN
Trigger: ATTATGCCAGATTCTGTGTCAACTGGTTCTGTATTT...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAATGTGGGGTATTTAGCTaGGATGTCTGCATATTTAGA +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQCGVFS*DVCIFR
Trigger: TCTAAATATGCAGACATCTCAGCTAAATACCCCACA...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp CCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCCACTACATACTCTGTAACTaGTGTTACACTTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PTLNPILSPSIKNLHHFHYILCN*CYTFLS
Trigger: GGACAGGAAAGTGTAACATCAGTTACAGAGTATGTA...GTGGAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR GCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACACTTCCTCTTGTTCTGTaGTCTGTTCATATTGCATTC +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTLPLVL*SVHIAF
Trigger: GAATGCAATATGAACAGAGCACAGAACAAGAGGAAG...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp CCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCCACTGTGCCTCAAACAACTaGAATTTGTTCTTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PTLNPILSPSIKNLHHFHCASNN*NLFFVW
Trigger: CCACACAAAGAACAAATTGCAGTTGTTTGAGGCACA...GTGGAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR GCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACATATGAAGATCTGCAGTaGTTATGCAAGATAACGGGT +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTYEDLQ*LCKITG
Trigger: ACCCGTTATCTTGCATAAGCACTGCAGATCTTCATA...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATAGTTTTTCTGCTTCTTTaGCACAGTCTGTATTGCGTC +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIVFLLL*HSLYCV
Trigger: GACGCAATACAGACTGTGGCAAAGAAGCAGAAAAAC...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACATGTAGACATGGATCCTaGAGCATTACTGTTCATACT +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTCRHGS*SITVHT
Trigger: AGTATGAACAGTAATGCTGCAGGATCCATGTCTACA...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAATATATAAACAACAATTaGAGGTGGATACGTGACTGC +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQYINNN*RWIRDC
Trigger: GCAGTCACGTATCCACCTGCAATTGTTGTTTATATA...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACATTTCTCTATCTTCATaGTTCACAGGTTGCAACAGG +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHISLSS*FTGCNR
Trigger: CCTGTTGCAACCTGTGAAGCATGAAGATAGAGAAAT...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATACTTTTACTTAGAGACTaGAAGTTTCGACGACTCAGC +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFILLLRD*KFRRLS
Trigger: GCTGAGTCGTCGAAACTTGCAGTCTCTAAGTAAAAG...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCAATGCTAGGGGAGTCTaGAGCAGATATACCACACAT +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFNARGV*SRYTTH
Trigger: ATGTGTGGTATATCTGCTGCAGACTCCCCTAGCATT...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGGCATATTTAGAGTCGTaGTTCTTCCAAATACAGAAC +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWAYLES*FFQIQN
Trigger: GTTCTGTATTTGGAAGAAGCACGACTCTAAATATGC...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAAACTGTACATGTACTCTaGAACTACAGCTTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQTVHVL*NYSLAV
Trigger: TACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGT...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGGATAACTCAATGGCTTaGATAAGAAAGGTATGGCTA +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWDNSMA*IRKVWL
Trigger: TAGCCATACCTTTCTTATGCAAGCCATTGAGTTATC...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAAGATTTGCTAATTTTCTaGGTATTTTCCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQDLLIF*VFSHHG
Trigger: ACCATGGTGGGAAAATACCCAGAAAATTAGCAAATC...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACAAGGAACCAAGGGATCTaGTGTTGGCATTTGATAAAA +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTRNQGI*CWHLIK
Trigger: TTTTATCAAATGCCAACACCAGATCCCTTGGTTCCT...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp CCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCCACACTTCCAGGCTATATTaGCTTCATCTTCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: PTLNPILSPSIKNLHHFHTSRLY*LHLLPS
Trigger: ACTTGGAAGAAGATGAAGCCAATATAGCCTGGAAGT...GTGGAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGTCCAAAAGGTCCAACTaGATCATCCTTGAATTTATC +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWSKRSN*IILEFI
Trigger: GATAAATTCAAGGATGATCCAGTTGGACCTTTTGGA...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAATTGATTCCTTGCAGCTaGCTTTATCATCTGATCCAT +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQLIPCS*LYHLIH
Trigger: ATGGATCAGATGATAAAGCCAGCTGCAAGGAATCAA...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATACAAGGCTTCATTTTCTaGACACAGTACAACATAGGC +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIQGFIF*TQYNIG
Trigger: GCCTATGTTGTACTGTGTCCAGAAAATGAAGCCTTG...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCGCAACTAAATTTGGCTaGGAAAGTAGAGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFATKFG*ESRELS
Trigger: GGACAGCTCTCTACTTTCCCAGCCAAATTTAGTTGC...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAAATTTGTCATCTGAGGTaGAGTAATCAAAGACTGACT +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQICHLR*SNQRLT
Trigger: AGTCAGTCTTTGATTACTCCACCTCAGATGACAAAT...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAAAAAATAATTGTGTACTaGGTTCCCTCCTTATGGCTC +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQKIIVY*VPSLWL
Trigger: GAGCCATAAGGAGGGAACCCAGTACACAATTATTTT...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACATATAAGTACACTTGGTaGCCTTCTGGCCAAACAATA +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTYKYTW*PSGQTI
Trigger: TATTGTTTGGCCAGAAGGCCACCAAGTGTACTTATA...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATAATACTGAAGAAAATTTaGCCCACTTCTGGACAGACT +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIILKKI*PTSGQT
Trigger: AGTCTGTCCAGAAGTGGGTCAAATTTTCTTCAGTAT...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp CCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCCACTTATCACTTGGAAGTTaGGGTGGTAAAAACTCTACA +
Preference number: 4 (lower is better)
Translates to: PTLNPILSPSIKNLHHFHLSLGS*GGKNST
Trigger: TGTAGAGTTTTTACCACCTCAACTTCCAAGTGATAA...GTGGAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR TCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACCATCTTCATCAGAATTaGAGAGATTATCAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHHLHQN*RDYQGQ
Trigger: CTGACCTTGATAATCTCTTCAATTCTGATGAAGATG...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATAATTTTCATATTTGACTaGACCTTGAGCACTAGCAGG +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIIFIFD*TLSTSR
Trigger: CCTGCTAGTGCTCAAGGTTCAGTCAAATATGAAAAT...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAACTGATTCTGAAAGGATaGGGTTTACATAAAGACTGT +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQLILKG*GLHKDC
Trigger: ACAGTCTTTATGTAAACCTCATCCTTTCAGAATCAG...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCGGAGTAATCAAAGACTaGCTTGTAGGGGCAACTAAA +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFGVIKD*LVGATK
Trigger: TTTAGTTGCCCCTACAAGTCAGTCTTTGATTACTCC...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACAAGTATATGAGTACATaGTGTATCCTGTGGGGTATT +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHKYMST*CILWGI
Trigger: AATACCCCACAGGATACATCATGTACTCATATACTT...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACATCTGAAGCCATATGTTaGAATTCATTGTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTSEAIC*NSLFLM
Trigger: CATGAGGAACAATGAATTTCAACATATGGCTTCAGA...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAATTCATATTGCATTCTTaGCAAACTCTATCCACCACA +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQFILHS*QTLSTT
Trigger: TGTGGTGGATAGAGTTTGGCAAGAATGCAATATGAA...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACGTGCTCTGTTCATATTaGATTCTTGCCAAACTCTAT +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHVLCSY*ILAKLY
Trigger: ATAGAGTTTGGCAAGAATGCAATATGAACAGAGCAC...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp CCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCCACGTGCTCTGTTCATATTaGATTCTTGCCAAACTCTAT +
Preference number: 4 (lower is better)
Translates to: PTLNPILSPSIKNLHHFHVLCSY*ILAKLY
Trigger: ATAGAGTTTGGCAAGAATGCAATATGAACAGAGCAC...GTGGAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR GCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATATGTGCCTCAAACAACTaGAATTTGTTCTTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFICASNN*NLFFVW
Trigger: CCACACAAAGAACAAATTGCAGTTGTTTGAGGCACA...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGATATCTGCAGACTTGTaGATAAAGCTTGAGTTTAGA +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWISADL*IKLEFR
Trigger: TCTAAACTCAAGCTTTATGCACAAGTCTGCAGATAT...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAACAGAATAAAAGGAGGTaGATAAAGTCGAATACACTC +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQQNKRR*IKSNTL
Trigger: GAGTGTATTCGACTTTATGCACCTCCTTTTATTCTG...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACTCAAATCCATCATCCTaGACAAGGCTTAATTTCTCA +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHSNPSS*TRLNFS
Trigger: TGAGAAATTAAGCCTTGTGCAGGATGATGGATTTGA...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACTTAGAGGTGCAAACATaGAACATCCCACTAGAATTT +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHLEVQT*NIPLEF
Trigger: AAATTCTAGTGGGATGTTCCATGTTTGCACCTCTAA...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATATCAATGTTTTCACATTaGTTGATGTTGGAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFISMFSH*LMLEVA
Trigger: GGCCACTTCCAACATCAACCAATGTGAAAACATTGA...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCTACAGGAGAACCAGTTaGAGAAGCAGGAAGGATATT +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFYRRTS*RSRKDI
Trigger: AATATCCTTCCTGCTTCTCCAACTGGTTCTCCTGTA...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAATTCTTTCACCGGAAATaGCCTGAAATATTAGTCATA +
Preference number: 4 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQFFHRK*PEILVI
Trigger: TATGACTAATATTTCAGGCCATTTCCGGTGAAAGAA...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGTTATTTCTGGAGGGGTaGGACAAAATAAGAATGTAT +
Preference number: 4 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWLFLEG*DKIRMY
Trigger: ATACATTCTTATTTTGTCCCACCCCTCCAGAAATAA...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp AATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCACTCTATCCACCACATaGTTTGCTAATTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: NPTLNPILSPSIKNLHHFTLSTT*FANFLG
Trigger: ACCCAGAAAATTAGCAAATCATGTGGTGGATAGAGT...GAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR TCA 90 bp CTTGTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATAGTATTTGTTGTTGCTaGCCTAAAGATGGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: LVNPTLNPILSPSIKNLHSICCC*PKDGAC
Trigger: ACAGGCACCATCTTTAGGTCAGCAACAACAAATACT...ATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTACAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR GCA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACGACTTGAGATTTTTGTaGCTCAAACAACTGCAATTT +
Preference number: 4 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHDLRFL*LKQLQF
Trigger: AAATTGCAGTTGTTTGAGGCACAAAAATCTCAAGTC...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAATTCTCATTGGTCTTGTaGTTAGGAAGTATTTGTTGT +
Preference number: 4 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQFSLVL*LGSICC
Trigger: ACAACAAATACTTCCTAAGCACAAGACCAATGAGAA...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATAACCTCAATTTTGAACTaGGCTCCTATACTAGAACTA +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFITSILN*APILEL
Trigger: TAGTTCTAGTATAGGAGCGCAGTTCAAAATTGAGGT...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCACTCTGAACTGTATTTaGTTGTGTAGACATGGATCC +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFTLNCI*LCRHGS
Trigger: GGATCCATGTCTACACAAGCAAATACAGTTCAGAGT...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATACAAGGGATCTGGTGTTaGCATTTGATAAAAATGTTG +
Preference number: 4 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIQGIWC*HLIKML
Trigger: CAACATTTTTATCAAATGCCAACACCAGATCCCTTG...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCAGGAACCAAGGGATCTaGTGTTGGCATTTGATAAAA +
Preference number: 4 (lower is better)
Translates to: NPTLNPILSPSIKNLHHFRNQGI*CWHLIK
Trigger: TTTTATCAAATGCCAACACCAGATCCCTTGGTTCCT...GAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCCTCCACTATTCAAGTTaGAGGATGATGAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFLHYSS*RMMKMK
Trigger: CTTCATCTTCATCATCCTCCAACTTGAATAGTGGAG...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCGTAATGGACCTGCTTTaGCAGTTGATACAAAGTAAC +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFVMDLL*QLIQSN
Trigger: GTTACTTTGTATCAACTGCCAAAGCAGGTCCATTAC...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCCTAGATGTTTCTCACTaGCTGGAAGCAGACATTATA +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFLDVSH*LEADII
Trigger: TATAATGTCTGCTTCCAGCCAGTGAGAAACATCTAG...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp CTTGTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATTTGTCCAGCATTTCTTaGCTTGAGATTTTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LVNPTLNPILSPSIKNLHLSSIS*LEIFVP
Trigger: AGGCACAAAAATCTCAAGTCAAGAAATGCTGGACAA...ATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR TCA 90 bp AATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCCAACTGGATCATCCTTaGATTTATCACTTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: NPTLNPILSPSIKNLHHFQLDHP*IYHLEV
Trigger: AACTTCCAAGTGATAAATTCAAGGATGATCCAGTTG...GAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR TCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCGCAAGAATCCACCTTTaGTCATGTGATAAACAGTAT +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFARIHL*SCDKQY
Trigger: ATACTGTTTATCACATGATCAAAGGTGGATTCTTGC...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR TCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCACCCATATTTGTCTGTaGCAGTACATTAGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFTHICL*QYISKS
Trigger: TGACTTACTAATGTACTGTCACAGACAAATATGGGT...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCTTTTCACTCTTTTCTTaGTTCTCATTGGTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFFSLFS*FSLVLC
Trigger: GCACAAGACCAATGAGAAGCAAGAAAAGAGTGAAAA...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp AATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCTTTTCACTCTTTTCTTaGTTCTCATTGGTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: NPTLNPILSPSIKNLHHFFSLFS*FSLVLC
Trigger: GCACAAGACCAATGAGAAGCAAGAAAAGAGTGAAAA...GAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR GCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCGAGGTGTATAAGCAGTaGCATATTCTTGATCCATAT +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFEVYKQ*HILDPY
Trigger: ATATGGATCAAGAATATGGCACTGCTTATACACCTC...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCCTTGAGTTTAGAAAATaGTTCATTGTTACCGTCAGC +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFLEFRK*FIVTVS
Trigger: GCTGACGGTAACAATGAAGCATTTTCTAAACTCAAG...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CCA 90 bp AATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCGATTTGCTAATTTTCTaGGTATTTTCCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: NPTLNPILSPSIKNLHHFDLLIF*VFSHHG
Trigger: ACCATGGTGGGAAAATACCCAGAAAATTAGCAAATC...GAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CCA 90 bp AATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCCAAGGGATCTGGTGTTaGCATTTGATAAAAATGTTG +
Preference number: 4 (lower is better)
Translates to: NPTLNPILSPSIKNLHHFQGIWC*HLIKML
Trigger: CAACATTTTTATCAAATGCCAACACCAGATCCCTTG...GAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CCA 90 bp GTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTCCAAAAGGTCCAACTaGATCATCCTTGAATTTATC +
Preference number: 4 (lower is better)
Translates to: VNPTLNPILSPSIKNLHHSKRSN*IILEFI
Trigger: GATAAATTCAAGGATGATCCAGTTGGACCTTTTGGA...GTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CCA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCATGTTTCTCACTGGCTaGAAGCAGACATTATATAAC +
Preference number: 4 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFMFLTG*KQTLYN
Trigger: GTTATATAATGTCTGCTTCCAGCCAGTGAGAAACAT...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR GCA 90 bp CTTGTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATTTCATATTGCATTCTTaGCAAACTCTATCCACCACA +
Preference number: 4 (lower is better)
Translates to: LVNPTLNPILSPSIKNLHFILHS*QTLSTT
Trigger: TGTGGTGGATAGAGTTTGGCAAGAATGCAATATGAA...ATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTACAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR GCA 90 bp AATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCCTAGTATTAAGAACTTaGATCACTTCCACCCTTAAA +
Preference number: 4 (lower is better)
Translates to: NPTLNPILSPSIKNLHHFLVLRT*ITSTLK
Trigger: TTTAAGGGTGGAAGTGATGCAAGTTCTTAATACTAG...GAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR GCA 90 bp CTTGTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATGACTTGAGATTTTTGTaGCTCAAACAACTGCAATTT +
Preference number: 4 (lower is better)
Translates to: LVNPTLNPILSPSIKNLHDLRFL*LKQLQF
Trigger: AAATTGCAGTTGTTTGAGGCACAAAAATCTCAAGTC...ATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTACAAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR GCA 90 bp CTTGTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATTTCTCATTGGTCTTGTaGTTAGGAAGTATTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LVNPTLNPILSPSIKNLHFSLVL*LGSICC
Trigger: ACAACAAATACTTCCTAAGCACAAGACCAATGAGAA...ATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTACAAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS TCA 90 bp AAGTGGGTGGGAGTGTTTACTGTGAAGCAGCTCGTCAGATTGCACTaGAGGCACGTGGAGGTGCAAAGAGGCCTTAAGAAAAAGGGGACA +
Preference number: 5 (lower is better)
Translates to: KWVGVFTVKQLVRLH*RHVEVQRGLKKKGT
Trigger: TGTCCCCTTTTTCTTAAGGCCTCTTTGCACCTCCACGTGCCTTCAGTGCAATCTGACGAGCTGCTTCACAGTAAACACTCCCACCCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CCA 90 bp ACTCTGACCCTTGCCCGCATCACCTCCATGGGGGTAATGAGATCCTaGAGAATGTACAGGAGAACCAGTTGGAGAAGCAGGAAGGATATT +
Preference number: 5 (lower is better)
Translates to: TLTLARITSMGVMRS*RMYRRTSWRSRKDI
Trigger: AATATCCTTCCTGCTTCTCCAACTGGTTCTCCTGTACATTCTCCAGGATCTCATTACCCCCATGGAGGTGATGCGGGCAAGGGTCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS GCA 90 bp GGTGGATGGAGAAGGAAGAATTCCTGCTCCGCTGTTACTAGGAGGTaGACTGCTAGGAGGCATCCCAAAAGAAGTATGAGTTTGAGGTGT +
Preference number: 5 (lower is better)
Translates to: GGWRRKNSCSAVTRR*TARRHPKRSMSLRC
Trigger: ACACCTCAAACTCATACTTCTTTTGGGATGCCTCCTAGCAGTGCACCTCCTAGTAACAGCGGAGCAGGAATTCTTCCTTCTCCATCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CCA 90 bp GACAGACTGAGGATCAACTGTTTGGACTTCCTCAGGAGACGTAGGTaGTGTAAGCGTAACCGAAGACATAGCAGGATCTCTTGTGGAAGC +
Preference number: 5 (lower is better)
Translates to: DRLRINCLDFLRRRR*CKRNRRHSRISCGS
Trigger: GCTTCCACAAGAGATCCTGCTATGTCTTCGGTTACGCTTACACCACCTACGTCTCCTGAGGAAGTCCAAACAGTTGATCCTCAGTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397786.7
ENST00000578132.1
CDS GCA 90 bp CGGCTCCATTGCCACCAAGCAAGCACTGAGAATGCTAGGGGAGTCTaGAGCAGATATACCACACATTCTACACATGTCTTTGAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: RLHCHQASTENARGV*SRYTTHSTHVFEPF
Trigger: AAAAGGCTCAAAGACATGTGTAGAATGTGTGGTATATCTGCTGCAGACTCCCCTAGCATTCTCAGTGCTTGCTTGGTGGCAATGGAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACGAGTCCTTGGAGTCCTaGGAGTTGGAAACCGAGGGG +
Preference number: 5 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHESLES*ELETEG
Trigger: CCCCTCGGTTTCCAACTCCAAGGACTCCAAGGACTC...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS GCA 90 bp GAGGTTTACATAAAGACTGTGTGCTTCAGGGATGGAAGGGACAGTTaGAGGTTCAACAGAATTAAGGGGTCTGCATGTAGATGGGGTAGA +
Preference number: 5 (lower is better)
Translates to: EVYIKTVCFRDGRDS*RFNRIKGSACRWGR
Trigger: TCTACCCCATCTACATGCAGACCCCTTAATTCTGTTGAACCTGCAACTGTCCCTTCCATCCCTGAAGCACACAGTCTTTATGTAAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS GCA 90 bp TTTTCTGTTCATGACAGCACTGAAGCCACAGGTACACCTATATTGTaGTTCCTGCGTTGGATCTGGAATGTAAACTCCAACATCGGCACC +
Preference number: 5 (lower is better)
Translates to: FSVHDSTEATGTPIL*FLRWIWNVNSNIGT
Trigger: GGTGCCGATGTTGGAGTTTACATTCCAGATCCAACGCAGGAAGCACAATATAGGTGTACCTGTGGCTTCAGTGCTGTCATGAACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCAGCGTCTGTCCTGGGTaGCAGGGTCACAGGTTAGCC +
Preference number: 5 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFSVCPG*QGHRLA
Trigger: GGCTAACCTGTGACCCTGCAACCCAGGACAGACGCT...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAATCTTCTTCCAGGTCTTaGATCTCGCCGCCAAACACC +
Preference number: 5 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQSSSRS*ISPPNT
Trigger: GGTGTTTGGCGGCGAGATCAAAGACCTGGAAGAAGA...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACCCTAGCTCTGTCTGTTaGTCCTTCACTGGAGCCAGA +
Preference number: 5 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHPSSVC*SFTGAR
Trigger: TCTGGCTCCAGTGAAGGACAAACAGACAGAGCTAGG...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACCTGAGGATCAACTGTTaGGACTTCCTCAGGAGACGT +
Preference number: 5 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHLRINC*DFLRRR
Trigger: ACGTCTCCTGAGGAAGTCCAAACAGTTGATCCTCAG...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGCCAGATTTCCTGTCTTaGATTCCTTGCAGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWPDFLS*IPCSWL
Trigger: AAGCCAGCTGCAAGGAATCAAAGACAGGAAATCTGG...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAACACTCTTCTGGCAATTaGATAGGGGGCAGATATTGG +
Preference number: 5 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQHSSGN*IGGRYW
Trigger: CCAATATCTGCCCCCTATCAAATTGCCAGAAGAGTG...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGAATAACAAAAGAGCCTaGCGGCTCCATTGCCACCAA +
Preference number: 5 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWNNKRA*RLHCHQ
Trigger: TTGGTGGCAATGGAGCCGCAAGGCTCTTTTGTTATT...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS TCA 90 bp GGGATCTGGTGTTGGCATTTGATAAAAATGTTGACTCTGAGGAGTTaGAGGTGTTTTAGTCACTCCTTCATCAACCACATCACAAGGGTG +
Preference number: 5 (lower is better)
Translates to: GIWCWHLIKMLTLRS*RCFSHSFINHITRV
Trigger: CACCCTTGTGATGTGGTTGATGAAGGAGTGACTAAAACACCTTCAACTCCTCAGAGTCAACATTTTTATCAAATGCCAACACCAGATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397786.7
ENST00000583958.1
CDS-3UTR CAA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGCATAAATCAAACTTGTaGATGGAGGACGGGCATGAC +
Preference number: 5 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWHKSNL*MEDGHD
Trigger: GTCATGCCCGTCCTCCATCAACAAGTTTGATTTATG...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAACCTGTCTTTGATTCCTaGCAGCTGGCTTTATCATCT +
Preference number: 5 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQPVFDS*QLALSS
Trigger: AGATGATAAAGCCAGCTGCAAGGAATCAAAGACAGG...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAAATTGTGCTTCCTGCGTaGGATCTGGAATGTAAACTC +
Preference number: 5 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQIVLPA*DLECKL
Trigger: GAGTTTACATTCCAGATCCAACGCAGGAAGCACAAT...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACACAGGTACACCTATATaGTGCTTCCTGCGTTGGATC +
Preference number: 5 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHTGTPI*CFLRWI
Trigger: GATCCAACGCAGGAAGCACAATATAGGTGTACCTGT...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAACTCACATCGTTTCTTTaGGACCAGGGGTGTAAGCAT +
Preference number: 5 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQLTSFL*DQGCKH
Trigger: ATGCTTACACCCCTGGTCCAAAAGAAACGATGTGAG...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACATTCATGCTTCACAGGTaGCAACAGGTACTGACAAGG +
Preference number: 5 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTFMLHR*QQVLTR
Trigger: CCTTGTCAGTACCTGTTGCAACCTGTGAAGCATGAA...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACGTACAGGAGAACCAGTaGGAGAAGCAGGAAGGATAT +
Preference number: 5 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHVQENQ*EKQEGY
Trigger: ATATCCTTCCTGCTTCTCCAACTGGTTCTCCTGTAC...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACACCTCATGAGGTTCTGTaGATAGTAGCCGATCAGTAC +
Preference number: 5 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTPHEVL*IVADQY
Trigger: GTACTGATCGGCTACTATCAACAGAACCTCATGAGG...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACACATCTGAAGTCTGATTaGAGTCAAGTGGGTGGGAGT +
Preference number: 5 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTHLKSD*SQVGGS
Trigger: ACTCCCACCCACTTGACTCAAATCAGACTTCAGATG...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACAGCACCACAAAATGAATaGGGAGACATGAGCGTCTGT +
Preference number: 5 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTAPQNE*GDMSVC
Trigger: ACAGACGCTCATGTCTCCCAATTCATTTTGTGGTGC...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAAGCTATTTTGAGAGGGTaGATGCTGACATGTCCAGTA +
Preference number: 5 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQAILRG*MLTCPV
Trigger: TACTGGACATGTCAGCATCAACCCTCTCAAAATAGC...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS TCA 90 bp ATCAATTATATAAACAACAATTGCAGGTGGATACGTGACTGCATGTaGATCACCATCTGTGGGGATTCCCACTTTATCCCGATCCATCGT +
Preference number: 5 (lower is better)
Translates to: INYINNNCRWIRDCM*ITICGDSHFIPIHR
Trigger: ACGATGGATCGGGATAAAGTGGGAATCCCCACAGATGGTGATTCACATGCAGTCACGTATCCACCTGCAATTGTTGTTTATATAATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATAGCTGAATCAGACATCTaGAATGCCTGTCCTGTGAGA +
Preference number: 5 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIAESDI*NACPVR
Trigger: TCTCACAGGACAGGCATTCAAGATGTCTGATTCAGC...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAAGTTCATATTGCATTCTaGCCAAACTCTATCCACCAC +
Preference number: 5 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQVHIAF*PNSIHH
Trigger: GTGGTGGATAGAGTTTGGCAAGAATGCAATATGAAC...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAAGCAGAATACTTCCTCTaGTTCTGTGCTCTGTTCATA +
Preference number: 5 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQAEYFL*FCALFI
Trigger: TATGAACAGAGCACAGAACAAGAGGAAGTATTCTGC...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCGTGGTTGAGGTGAATTaGCCATTTCGGTGCCATGCA +
Preference number: 5 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFVVEVN*PFRCHA
Trigger: TGCATGGCACCGAAATGGCAAATTCACCTCAACCAC...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp GTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACGTGGTTGAGGTGAATTaGCCATTTCGGTGCCATGCA +
Preference number: 5 (lower is better)
Translates to: VNPTLNPILSPSIKNLHHVVEVN*PFRCHA
Trigger: TGCATGGCACCGAAATGGCAAATTCACCTCAACCAC...GTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CAA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAATACTTCCAGGCTATATaGGCTTCATCTTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQYFQAI*ASSSSK
Trigger: CTTGGAAGAAGATGAAGCCAATATAGCCTGGAAGTA...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAACTGCATCAGATGCTATaGCTGAAAGACACTGGTTTT +
Preference number: 5 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQLHQML*LKDTGF
Trigger: AAAACCAGTGTCTTTCAGCAATAGCATCTGATGCAG...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCAGGGCGTGGAGCATCTaGCTTGATAGAGGGACTAAA +
Preference number: 5 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFRAWSI*LDRGTK
Trigger: TTTAGTCCCTCTATCAAGCAAGATGCTCCACGCCCT...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACACGTTTTTCTGCTTCTTaGCCACAGTCTGTATTGCGT +
Preference number: 5 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTRFSAS*PQSVLR
Trigger: ACGCAATACAGACTGTGGCAAAGAAGCAGAAAAACG...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGCATTTTATGAAATTGTaGCCAAGTGAGAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWHFMKL*PSERTL
Trigger: CAGGGTCCTCTCACTTGGCAACAATTTCATAAAATG...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGATAGGCTATATCTCTTaGAGATCCATAGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWIGYIS*RSIGFQ
Trigger: CTGGAACCCTATGGATCTCAAAGAGATATAGCCTAT...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACAATGTTTTCACATTGGTaGATGTTGGAAGTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTMFSHW*MLEVAS
Trigger: GGAGGCCACTTCCAACATCAACCAATGTGAAAACAT...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACTATTTACACCACAGTTaGATTGCGCGCACACACACA +
Preference number: 5 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHYLHHS*IARTHT
Trigger: TGTGTGTGTGCGCGCAATCAAACTGTGGTGTAAATA...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATATACAGACTCTGGTGTTaGGGACTGACATCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIYRLWC*GLTSPN
Trigger: GTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTA...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACAAGTGACCAAGCTATTTaGAGAGGGTTGATGCTGACA +
Preference number: 5 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTSDQAI*RGLMLT
Trigger: TGTCAGCATCAACCCTCTCAAAATAGCTTGGTCACT...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS TCA 90 bp TGTGCTCTGTTCATATTGCATTCTTGCCAAACTCTATCCACCACATaGTTTGCTAATTTTCTGGGTATTTTCCCACCATGGTGGCTAGTA +
Preference number: 5 (lower is better)
Translates to: CALFILHSCQTLSTT*FANFLGIFPPWWLV
Trigger: TACTAGCCACCATGGTGGGAAAATACCCAGAAAATTAGCAAATCATGTGGTGGATAGAGTTTGGCAAGAATGCAATATGAACAGAGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397786.7
ENST00000578132.1
ENST00000581994.1
ENST00000583958.1
CDS CCA 90 bp TGTACCAACATATACTGTAGGTTCTACAGCTTCCTGATATTGAGGTaGGAAAGACTGGGACAAACTGTCTATCCTATCTTCCATTGGTTT +
Preference number: 5 (lower is better)
Translates to: CTNIYCRFYSFLILR*ERLGQTVYPIFHWF
Trigger: AAACCAATGGAAGATAGGATAGACAGTTTGTCCCAGTCTTTCCCACCTCAATATCAGGAAGCTGTAGAACCTACAGTATATGTTGGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397786.7
ENST00000583958.1
CDS-3UTR CAA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACGATACTGAAGAAAATTaGACCCACTTCTGGACAGAC +
Preference number: 5 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHDTEEN*THFWTD
Trigger: GTCTGTCCAGAAGTGGGTCAAATTTTCTTCAGTATC...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACCTAGTACTATCGGAGTaGAAGCCATCAGATACTGAA +
Preference number: 5 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHLVLSE*KPSDTE
Trigger: TTCAGTATCTGATGGCTTCAACTCCGATAGTACTAG...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAATGTGCTCTGTTCATATaGCATTCTTGCCAAACTCTA +
Preference number: 5 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQCALFI*HSCQTL
Trigger: TAGAGTTTGGCAAGAATGCAATATGAACAGAGCACA...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp CCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCCACGCAGAATACTTCCTCTaGTTCTGTGCTCTGTTCATA +
Preference number: 5 (lower is better)
Translates to: PTLNPILSPSIKNLHHFHAEYFL*FCALFI
Trigger: TATGAACAGAGCACAGAACAAGAGGAAGTATTCTGC...GTGGAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CAA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGTGCTTCTCATTGGTCTaGTGCTTAGGAAGTATTTGT +
Preference number: 5 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWCFSLV*CLGSIC
Trigger: ACAAATACTTCCTAAGCACAAGACCAATGAGAAGCA...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCTACAGCTTCCTGATATaGAGGTGGGAAAGACTGGGA +
Preference number: 5 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFYSFLI*RWERLG
Trigger: TCCCAGTCTTTCCCACCTCAATATCAGGAAGCTGTA...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACCAGTTCCTCCAGGTGTaGTATCCATACTACCATATT +
Preference number: 5 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHQFLQV*YPYYHI
Trigger: AATATGGTAGTATGGATACAACACCTGGAGGAACTG...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACTTGCCACAGTCTGTATaGCGTCCTATGATATCTAGT +
Preference number: 5 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHLPQSV*RPMISS
Trigger: ACTAGATATCATAGGACGCAATACAGACTGTGGCAA...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATGGTATGGACATTATTCCCCCTCTATCCCCGTTAAACTGTACATCGAGACAAACTCCACTATTCAAGTaGGAGGATGATGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: NGMDIIPPLSPLNCTSRQTPLFK*EDDEDE
Trigger: TTCATCTTCATCATCCTCCAACTTGAATAGTGGAGT...TTGTCTCGATGTACAGTTTAACGGGGATAGAGGGGGAATAATGTCCATACCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACTCTGCTCCATCATTGTaGGGATTGAAAGCTAAATCC +
Preference number: 5 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHSAPSL*GLKAKS
Trigger: GGATTTAGCTTTCAATCCCAACAATGATGGAGCAGA...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS GCA 90 bp ATACCACACATTCTACACATGTCTTTGAGCCTTTTACTTAGAGACTaGAAGTTTCGACGACTCAGCAAACAGCTCCAATCTTTCAATTCT +
Preference number: 5 (lower is better)
Translates to: IPHILHMSLSLLLRD*KFRRLSKQLQSFNS
Trigger: AGAATTGAAAGATTGGAGCTGTTTGCTGAGTCGTCGAAACTTGCAGTCTCTAAGTAAAAGGCTCAAAGACATGTGTAGAATGTGTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGTCAAACAACTGCAATTaGTTCTTTGTGTGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWSNNCN*FFVWLQ
Trigger: TTGAAGCCACACAAAGAACAAATTGCAGTTGTTTGA...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAACTTGACTTGAGATTTTaGTGCCTCAAACAACTGCAA +
Preference number: 5 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQLDLRF*CLKQLQ
Trigger: TTGCAGTTGTTTGAGGCACAAAAATCTCAAGTCAAG...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp CTTGTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATTACAGCTTCCTGATATaGAGGTGGGAAAGACTGGGA +
Preference number: 5 (lower is better)
Translates to: LVNPTLNPILSPSIKNLHYSFLI*RWERLG
Trigger: TCCCAGTCTTTCCCACCTCAATATCAGGAAGCTGTA...ATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CAA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAACCAACTGGATCATCCTaGAATTTATCACTTGGAAGT +
Preference number: 5 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQPTGSS*NLSLGS
Trigger: ACTTCCAAGTGATAAATTCAAGGATGATCCAGTTGG...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATACGTGGAGCATCTTGCTaGATAGAGGGACTAAATAAT +
Preference number: 5 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIRGASC*IEGLNN
Trigger: ATTATTTAGTCCCTCTATCAAGCAAGATGCTCCACG...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TGGCATATGCCCTACCTTAATCTGAGCTGTGTTATAGAAAAGTACAGACTCTGGTCAACACGTACCCAATaGCTAATTACACCACTTTTA +
Preference number: 5 (lower is better)
Translates to: WHMPYLNLSCVIEKYRLWSTRTQ*LITPLL
Trigger: TAAAAGTGGTGTAATTAGCAATTGGGTACGTGTTGA...CCAGAGTCTGTACTTTTCTATAACACAGCTCAGATTAAGGTAGGGCATATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACGTCATATCTGCAGACTaGTGCATAAAGCTTGAGTTT +
Preference number: 5 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHVISAD*CIKLEF
Trigger: AAACTCAAGCTTTATGCACAAGTCTGCAGATATGAC...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATAGTCAATGTTTTCACATaGGTTGATGTTGGAAGTGGC +
Preference number: 5 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIVNVFT*VDVGSG
Trigger: GCCACTTCCAACATCAACCAATGTGAAAACATTGAC...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS GCA 90 bp GTAATACTTCCAGGCTATATTGGCTTCATCTTCTTCCAAGTTTACTaGTGTACCAACATATACTGTAGGTTCTACAGCTTCCTGATATTG +
Preference number: 5 (lower is better)
Translates to: VILPGYIGFIFFQVY*CTNIYCRFYSFLIL
Trigger: CAATATCAGGAAGCTGTAGAACCTACAGTATATGTTGGTACAGCAGTAAACTTGGAAGAAGATGAAGCCAATATAGCCTGGAAGTATTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397786.7
ENST00000583958.1
CDS-3UTR CAA 90 bp AATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCGTTCATATTGCATTCTaGCCAAACTCTATCCACCAC +
Preference number: 5 (lower is better)
Translates to: NPTLNPILSPSIKNLHHFVHIAF*PNSIHH
Trigger: GTGGTGGATAGAGTTTGGCAAGAATGCAATATGAAC...GAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CAA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACAACTGCAATTTGTTCTTaGTGTGGCTTCAACAAAATC +
Preference number: 5 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTTAICS*CGFNKI
Trigger: GATTTTGTTGAAGCCACACAAAGAACAAATTGCAGT...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp GTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTACTTCCAGGCTATATaGGCTTCATCTTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: VNPTLNPILSPSIKNLHHYFQAI*ASSSSK
Trigger: CTTGGAAGAAGATGAAGCCAATATAGCCTGGAAGTA...GTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CAA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCAGTCATAAATCAAACTaGTTGATGGAGGACGGGCAT +
Preference number: 5 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFSHKSN*LMEDGH
Trigger: ATGCCCGTCCTCCATCAACAAGTTTGATTTATGACT...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATATCATCAACCTCAATTTaGAACTGCGCTCCTATACTA +
Preference number: 5 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFISSTSI*NCAPIL
Trigger: TAGTATAGGAGCGCAGTTCAAAATTGAGGTTGATGA...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp GTACACTTGGTGGCCTTCTGGCCAAACAATAAGGTGTACAGAAATTTATTCATAAAAAGAAGTATGAGTTaGAGGTGTATAAGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: VHLVAFWPNNKVYRNLFIKRSMS*RCISSA
Trigger: GGCACTGCTTATACACCTCAAACTCATACTTCTTTT...TATGAATAAATTTCTGTACACCTTATTGTTTGGCCAGAAGGCCACCAAGTGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TGTGTTATAGAAAAGTACAGACTCTGGTGTTTGGGACTGACATCTCCAAACCAAATTCTACACATGTCTTaGAGCCTTTTACTTAGAGAC +
Preference number: 5 (lower is better)
Translates to: CVIEKYRLWCLGLTSPNQILHMS*SLLLRD
Trigger: GTCTCTAAGTAAAAGGCTCAAAGACATGTGTAGAAT...TTGGTTTGGAGATGTCAGTCCCAAACACCAGAGTCTGTACTTTTCTATAACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCCCATCTGCTCCATCATaGTTGGGATTGAAAGCTAAA +
Preference number: 5 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFPSAPS*LGLKAK
Trigger: TTTAGCTTTCAATCCCAACAATGATGGAGCAGATGG...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp ATACCAGAATTCACTGAGAATCTATTTACACCACAGTTTGATTGCGCGCACACAATAAAAGCAGTTATCTaGGCATGTGCAAACAAGAAG +
Preference number: 5 (lower is better)
Translates to: IPEFTENLFTPQFDCAHTIKAVI*ACANKK
Trigger: CTTCTTGTTTGCACATGCCAAGATAACTGCTTTTAT...TGTGTGCGCGCAATCAAACTGTGGTGTAAATAGATTCTCAGTGAATTCTGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp TTCATTACTGTACATGTACTCTGCAACTACAGCTTAGCTGTAAATCCTCCACACAAAGAAGTCAAGGTGTaGGTAATCCACTGCTATAAA +
Preference number: 5 (lower is better)
Translates to: FITVHVLCNYSLAVNPPHKEVKV*VIHCYK
Trigger: TTTATAGCAGTGGATTACCAACACCTTGACTTCTTT...GTGTGGAGGATTTACAGCTAAGCTGTAGTTGCAGAGTACATGTACAGTAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCTGCTTCTCATTGGTCTaGTGCTTAGGAAGTATTTGT +
Preference number: 5 (lower is better)
Translates to: NPTLNPILSPSIKNLHHFCFSLV*CLGSIC
Trigger: ACAAATACTTCCTAAGCACAAGACCAATGAGAAGCA...GAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CAA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCCCAAGGGATCTGGTGTaGGCATTTGATAAAAATGTT +
Preference number: 5 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFPRDLV*AFDKNV
Trigger: AACATTTTTATCAAATGCCAACACCAGATCCCTTGG...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp GTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACCCAAGGGATCTGGTGTaGGCATTTGATAAAAATGTT +
Preference number: 5 (lower is better)
Translates to: VNPTLNPILSPSIKNLHHPRDLV*AFDKNV
Trigger: AACATTTTTATCAAATGCCAACACCAGATCCCTTGG...GTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CAA 90 bp GTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACCCAACTGGATCATCCTaGAATTTATCACTTGGAAGT +
Preference number: 5 (lower is better)
Translates to: VNPTLNPILSPSIKNLHHPTGSS*NLSLGS
Trigger: ACTTCCAAGTGATAAATTCAAGGATGATCCAGTTGG...GTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CAA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCAGCAGTGCCATATTCTaGATCCATATTACTTCCATC +
Preference number: 5 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFSSAIF*IHITSI
Trigger: GATGGAAGTAATATGGATCAAGAATATGGCACTGCT...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp AATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCCTTGTAAATCCTACCTaGAATCCAATACTGAGTCCT +
Preference number: 5 (lower is better)
Translates to: NPTLNPILSPSIKNLHHFLVNPT*NPILSP
Trigger: AGGACTCAGTATTGGATTCAAGGTAGGATTTACAAG...GAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CAA 90 bp CTTGTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATTGTGCTCTGTTCATATaGCATTCTTGCCAAACTCTA +
Preference number: 5 (lower is better)
Translates to: LVNPTLNPILSPSIKNLHCALFI*HSCQTL
Trigger: TAGAGTTTGGCAAGAATGCAATATGAACAGAGCACA...ATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTACAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CAA 90 bp AATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCACTTCTCAAACAACTGCAATTaGTTCTTTGTGTGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: NPTLNPILSPSIKNLHHFSNNCN*FFVWLQ
Trigger: TTGAAGCCACACAAAGAACAAATTGCAGTTGTTTGA...GAAGTGATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CAA 90 bp CTTGTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATCTTGACTTGAGATTTTaGTGCCTCAAACAACTGCAA +
Preference number: 5 (lower is better)
Translates to: LVNPTLNPILSPSIKNLHLDLRF*CLKQLQ
Trigger: TTGCAGTTGTTTGAGGCACAAAAATCTCAAGTCAAG...ATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS-3UTR CAA 90 bp AATCCATCATCCTGCACAAGGCTTAATTTCTCAAATAAGTCTACTGAGCTTTTCTTCCTCAATCACAATTaGTACAACTCAGTGTTATGG +
Preference number: 5 (lower is better)
Translates to: NPSSCTRLNFSNKSTELFFLNHN*YNSVLW
Trigger: CCATAACACTGAGTTGTACAAATTGTGATTGAGGAA...GAAAAGCTCAGTAGACTTATTTGAGAAATTAAGCCTTGTGCAGGATGATGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS-3UTR CAA 90 bp CTTGTAAATCCTACCTTGAATCCAATACTGAGTCCTAGTATTAAGAACTTGCATACTGCAATTTGTTCTTaGTGTGGCTTCAACAAAATC +
Preference number: 5 (lower is better)
Translates to: LVNPTLNPILSPSIKNLHTAICS*CGFNKI
Trigger: GATTTTGTTGAAGCCACACAAAGAACAAATTGCAGT...ATGCAAGTTCTTAATACTAGGACTCAGTATTGGATTCAAGGTAGGATTTACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583958.1
CDS CAA 72 bp CAGGTCCACCAGCTCCACGAGGAGTCCGAGGAGTCCTaGGAGTCCTTGGAGTTGGAAACCGAGGGGTGGATG +
Preference number: 6 (lower is better)
Translates to: QVHQLHEESEES*ESLELETEGWM
Trigger: CATCCACCCCTCGGTTTCCAACTCCAAGGACTCCAAGGACTCCTCGGACTCCTCGTGGAGCTGGTGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS TCA 72 bp GGAAGCAGGCACTTGGTGGACACCCAAGCAAGAAGATaGACAGTGAGTGGATCCCACAGGGCTAGGAGTAGG +
Preference number: 6 (lower is better)
Translates to: GSRHLVDTQARR*TVSGSHRARSR
Trigger: CCTACTCCTAGCCCTGTGGGATCCACTCACTGTTCATCTTCTTGCTTGGGTGTCCACCAAGTGCCTGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397786.7
ENST00000578132.1
CDS CAA 72 bp CAAAATGAATTGGGAGACATGAGCGTCTGTCCTGGGTaGCAGGGTCACAGGTTAGCCAGGAGAGTGCATTGT +
Preference number: 6 (lower is better)
Translates to: QNELGDMSVCPG*QGHRLARRVHC
Trigger: ACAATGCACTCTCCTGGCTAACCTGTGACCCTGCAACCCAGGACAGACGCTCATGTCTCCCAATTCATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS TCA 72 bp CGATCCATCGTGCTTTCAGACACATCAGGATGCGGCTaGGTGGGAAGTGAAGATGATTCTCCAGAAATCCCA +
Preference number: 6 (lower is better)
Translates to: RSIVLSDTSGCG*VGSEDDSPEIP
Trigger: TGGGATTTCTGGAGAATCATCTTCACTTCCCACTCAGCCGCATCCTGATGTGTCTGAAAGCACGATGGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS TCA 72 bp ACCTGGACCAAAGCCAGTCAATGTTTTCACATTGGTTaGTGTTGGAAGTGGCCTCCGACACTGGGTAAAGGC +
Preference number: 6 (lower is better)
Translates to: TWTKASQCFHIG*CWKWPPTLGKG
Trigger: GCCTTTACCCAGTGTCGGAGGCCACTTCCAACATCAACCAATGTGAAAACATTGACTGGCTTTGGTCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS TCA 72 bp GGAGTGTTTACTGTGAAGCAGCTCGTCAGATTGCACTaGAGGCACGTGGAGGTGCAAAGAGGCCTTAAGAAA +
Preference number: 6 (lower is better)
Translates to: GVFTVKQLVRLH*RHVEVQRGLKK
Trigger: TTTCTTAAGGCCTCTTTGCACCTCCACGTGCCTTCAGTGCAATCTGACGAGCTGCTTCACAGTAAACACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS GCA 72 bp ATCTGGCATAATAACAAAAGAGCCTTGCGGCTCCATTaGCACCAAGCAAGCACTGAGAATGCTAGGGGAGTC +
Preference number: 6 (lower is better)
Translates to: IWHNNKRALRLH*HQASTENARGV
Trigger: GACTCCCCTAGCATTCTCAGTGCTTGCTTGGTGGCAATGGAGCCGCAAGGCTCTTTTGTTATTATGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397786.7
ENST00000582786.1
CDS CAA 90 bp GTTTCCATGGCTAAACCTGGACCAAAGCCAGTCAATGTTTTCACATaGGTTGATGTTGGAAGTGGCCTCCGACACTGGGTAAAGGCCGAA +
Preference number: 6 (lower is better)
Translates to: VSMAKPGPKPVNVFT*VDVGSGLRHWVKAE
Trigger: TTCGGCCTTTACCCAGTGTCGGAGGCCACTTCCAACATCAACCAATGTGAAAACATTGACTGGCTTTGGTCCAGGTTTAGCCATGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS GCA 72 bp ACTGACGCCCATGTTCTAATGCAAGGTAGCAGTCATTaGAACAGTCACGCTCTTCAACACGTACCCAATTGC +
Preference number: 6 (lower is better)
Translates to: TDAHVLMQGSSH*NSHALQHVPNC
Trigger: GCAATTGGGTACGTGTTGAAGAGCGTGACTGTTGCAATGACTGCTACCTTGCATTAGAACATGGGCGTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CCA 72 bp AGGATCAACTGTTTGGACTTCCTCAGGAGACGTAGGTaGTGTAAGCGTAACCGAAGACATAGCAGGATCTCT +
Preference number: 6 (lower is better)
Translates to: RINCLDFLRRRR*CKRNRRHSRIS
Trigger: AGAGATCCTGCTATGTCTTCGGTTACGCTTACACCACCTACGTCTCCTGAGGAAGTCCAAACAGTTGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397786.7
ENST00000578132.1
CDS CAA 72 bp GCTAAACCTGGACCAAAGCCAGTCAATGTTTTCACATaGGTTGATGTTGGAAGTGGCCTCCGACACTGGGTA +
Preference number: 6 (lower is better)
Translates to: AKPGPKPVNVFT*VDVGSGLRHWV
Trigger: TACCCAGTGTCGGAGGCCACTTCCAACATCAACCAATGTGAAAACATTGACTGGCTTTGGTCCAGGTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS GCA 72 bp CATGACAGCACTGAAGCCACAGGTACACCTATATTGTaGTTCCTGCGTTGGATCTGGAATGTAAACTCCAAC +
Preference number: 6 (lower is better)
Translates to: HDSTEATGTPIL*FLRWIWNVNSN
Trigger: GTTGGAGTTTACATTCCAGATCCAACGCAGGAAGCACAATATAGGTGTACCTGTGGCTTCAGTGCTGTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS GCA 72 bp AGAGAGAGGAGCATTCGAAGTATATCCTGTGAGCACTaGATACTCACATCGTTTCTTTTGGACCAGGGGTGT +
Preference number: 6 (lower is better)
Translates to: RERSIRSISCEH*ILTSFLLDQGC
Trigger: ACACCCCTGGTCCAAAAGAAACGATGTGAGTATGCAGTGCTCACAGGATATACTTCGAATGCTCCTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS GCA 72 bp TGCCACCAAGCAAGCACTGAGAATGCTAGGGGAGTCTaGAGCAGATATACCACACATTCTACACATGTCTTT +
Preference number: 6 (lower is better)
Translates to: CHQASTENARGV*SRYTTHSTHVF
Trigger: AAAGACATGTGTAGAATGTGTGGTATATCTGCTGCAGACTCCCCTAGCATTCTCAGTGCTTGCTTGGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS GCA 72 bp GTTGACACAGAATCTGGCATAATAACAAAAGAGCCTTaGGGCTCCATTGCCACCAAGCAAGCACTGAGAATG +
Preference number: 6 (lower is better)
Translates to: VDTESGIITKEP*GSIATKQALRM
Trigger: CATTCTCAGTGCTTGCTTGGTGGCAATGGAGCCGCAAGGCTCTTTTGTTATTATGCCAGATTCTGTGTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397786.7
ENST00000582786.1
CDS CCA 72 bp TTCACATTGGTTGATGTTGGAAGTGGCCTCCGACACTaGGTAAAGGCCGAAAAAGCCAGGGATTTTAAATGC +
Preference number: 6 (lower is better)
Translates to: FTLVDVGSGLRH*VKAEKARDFKC
Trigger: GCATTTAAAATCCCTGGCTTTTTCGGCCTTTACCCAGTGTCGGAGGCCACTTCCAACATCAACCAATGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CAA 72 bp GTTCATGACAGCACTGAAGCCACAGGTACACCTATATaGTGCTTCCTGCGTTGGATCTGGAATGTAAACTCC +
Preference number: 6 (lower is better)
Translates to: VHDSTEATGTPI*CFLRWIWNVNS
Trigger: GGAGTTTACATTCCAGATCCAACGCAGGAAGCACAATATAGGTGTACCTGTGGCTTCAGTGCTGTCATGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS TCA 72 bp GAATACAAGTCTGAATTTTCATATTTGACTGAACCTTaGGCACTAGCAGGTCCACCAGCTCCACGAGGAGTC +
Preference number: 6 (lower is better)
Translates to: EYKSEFSYLTEP*ALAGPPAPRGV
Trigger: GACTCCTCGTGGAGCTGGTGGACCTGCTAGTGCTCAAGGTTCAGTCAAATATGAAAATTCAGACTTGTATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS TCA 72 bp TGGCTGAAGAGAGAGGAGCATTCGAAGTATATCCTGTaGGCACTGCATACTCACATCGTTTCTTTTGGACCA +
Preference number: 6 (lower is better)
Translates to: WLKREEHSKYIL*ALHTHIVSFGP
Trigger: TGGTCCAAAAGAAACGATGTGAGTATGCAGTGCTCACAGGATATACTTCGAATGCTCCTCTCTCTTCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS TCA 72 bp ATAAACAACAATTGCAGGTGGATACGTGACTGCATGTaGATCACCATCTGTGGGGATTCCCACTTTATCCCG +
Preference number: 6 (lower is better)
Translates to: INNNCRWIRDCM*ITICGDSHFIP
Trigger: CGGGATAAAGTGGGAATCCCCACAGATGGTGATTCACATGCAGTCACGTATCCACCTGCAATTGTTGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CCA 72 bp ACAGGTACACCTATATTGTGCTTCCTGCGTTGGATCTaGAATGTAAACTCCAACATCGGCACCCTTGATGTT +
Preference number: 6 (lower is better)
Translates to: TGTPILCFLRWI*NVNSNIGTLDV
Trigger: AACATCAAGGGTGCCGATGTTGGAGTTTACATTCCAGATCCAACGCAGGAAGCACAATATAGGTGTACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CAA 90 bp AAATTTTCTGTTCATGACAGCACTGAAGCCACAGGTACACCTATATaGTGCTTCCTGCGTTGGATCTGGAATGTAAACTCCAACATCGGC +
Preference number: 6 (lower is better)
Translates to: KFSVHDSTEATGTPI*CFLRWIWNVNSNIG
Trigger: GCCGATGTTGGAGTTTACATTCCAGATCCAACGCAGGAAGCACAATATAGGTGTACCTGTGGCTTCAGTGCTGTCATGAACAGAAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS GCA 72 bp CTGTTTGTCCTTCACTGGAGCCAGAATAAAAGGAGGTaGATAAAGTCGAATACACTCTGGTCTATCAGGACT +
Preference number: 6 (lower is better)
Translates to: LFVLHWSQNKRR*IKSNTLWSIRT
Trigger: AGTCCTGATAGACCAGAGTGTATTCGACTTTATGCACCTCCTTTTATTCTGGCTCCAGTGAAGGACAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CAA 90 bp GATCTGCAGTGCTTATGCAAGATAACGGGTCCAGATTTCCTGTCTTaGATTCCTTGCAGCTGGCTTTATCATCTGATCCATTTGCTGATT +
Preference number: 6 (lower is better)
Translates to: DLQCLCKITGPDFLS*IPCSWLYHLIHLLI
Trigger: AATCAGCAAATGGATCAGATGATAAAGCCAGCTGCAAGGAATCAAAGACAGGAAATCTGGACCCGTTATCTTGCATAAGCACTGCAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CAA 90 bp ACTAGGAGGTGCACTGCTAGGAGGCATCCCAAAAGAAGTATGAGTTaGAGGTGTATAAGCAGTGCCATATTCTTGATCCATATTACTTCC +
Preference number: 6 (lower is better)
Translates to: TRRCTARRHPKRSMS*RCISSAIFLIHITS
Trigger: GGAAGTAATATGGATCAAGAATATGGCACTGCTTATACACCTCAAACTCATACTTCTTTTGGGATGCCTCCTAGCAGTGCACCTCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS TCA 72 bp TCCTTAATTCTGGGAAACACACTGAGTACACAGGAGTaGTGGGACATCATGTCTGTAGGTTGTTCTCAAATG +
Preference number: 6 (lower is better)
Translates to: SLILGNTLSTQE*WDIMSVGCSQM
Trigger: CATTTGAGAACAACCTACAGACATGATGTCCCATCACTCCTGTGTACTCAGTGTGTTTCCCAGAATTAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581994.1
CDS GCA 72 bp ACTCTGAACTGTATTTGCTTGTGTAGACATGGATCCTaGAGCATTACTGTTCATACTGCCAAAGGGTGGAAA +
Preference number: 6 (lower is better)
Translates to: TLNCICLCRHGS*SITVHTAKGWK
Trigger: TTTCCACCCTTTGGCAGTATGAACAGTAATGCTGCAGGATCCATGTCTACACAAGCAAATACAGTTCAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CAA 72 bp CAAGATAACGGGTCCAGATTTCCTGTCTTTGATTCCTaGCAGCTGGCTTTATCATCTGATCCATTTGCTGAT +
Preference number: 6 (lower is better)
Translates to: QDNGSRFPVFDS*QLALSSDPFAD
Trigger: ATCAGCAAATGGATCAGATGATAAAGCCAGCTGCAAGGAATCAAAGACAGGAAATCTGGACCCGTTATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CAA 72 bp TGCTTATGCAAGATAACGGGTCCAGATTTCCTGTCTTaGATTCCTTGCAGCTGGCTTTATCATCTGATCCAT +
Preference number: 6 (lower is better)
Translates to: CLCKITGPDFLS*IPCSWLYHLIH
Trigger: ATGGATCAGATGATAAAGCCAGCTGCAAGGAATCAAAGACAGGAAATCTGGACCCGTTATCTTGCATAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CAA 72 bp GGTTTGGGGCTACAGAATCCCTCATCAACCTCAATTTaGAACTGCGCTCCTATACTAGAACTATTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: GLGLQNPSSTSI*NCAPILELFPS
Trigger: AGAAGGAAATAGTTCTAGTATAGGAGCGCAGTTCAAAATTGAGGTTGATGAGGGATTCTGTAGCCCCAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CAA 72 bp TGCACTGCTAGGAGGCATCCCAAAAGAAGTATGAGTTaGAGGTGTATAAGCAGTGCCATATTCTTGATCCAT +
Preference number: 6 (lower is better)
Translates to: CTARRHPKRSMS*RCISSAIFLIH
Trigger: ATGGATCAAGAATATGGCACTGCTTATACACCTCAAACTCATACTTCTTTTGGGATGCCTCCTAGCAGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS TCA 72 bp GATCAATTATATAAACAACAATTGCAGGTGGATACGTaGCTGCATGTGAATCACCATCTGTGGGGATTCCCA +
Preference number: 6 (lower is better)
Translates to: DQLYKQQLQVDT*LHVNHHLWGFP
Trigger: TGGGAATCCCCACAGATGGTGATTCACATGCAGTCACGTATCCACCTGCAATTGTTGTTTATATAATTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS GCA 72 bp GGGCTACAGAATCCCTCATCAACCTCAATTTTGAACTaGGCTCCTATACTAGAACTATTTCCTTCTAGAACA +
Preference number: 6 (lower is better)
Translates to: GLQNPSSTSILN*APILELFPSRT
Trigger: TGTTCTAGAAGGAAATAGTTCTAGTATAGGAGCGCAGTTCAAAATTGAGGTTGATGAGGGATTCTGTAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS GCA 72 bp TCTGCAGACTTGTGCATAAAGCTTGAGTTTAGAAAATaGTTCATTGTTACCGTCAGCTGCCTGAGAAAACCA +
Preference number: 6 (lower is better)
Translates to: SADLCIKLEFRK*FIVTVSCLRKP
Trigger: TGGTTTTCTCAGGCAGCTGACGGTAACAATGAAGCATTTTCTAAACTCAAGCTTTATGCACAAGTCTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS GCA 72 bp ATTCTACACATGTCTTTGAGCCTTTTACTTAGAGACTaGAAGTTTCGACGACTCAGCAAACAGCTCCAATCT +
Preference number: 6 (lower is better)
Translates to: ILHMSLSLLLRD*KFRRLSKQLQS
Trigger: AGATTGGAGCTGTTTGCTGAGTCGTCGAAACTTGCAGTCTCTAAGTAAAAGGCTCAAAGACATGTGTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CCA 72 bp ATATACTGTAGGTTCTACAGCTTCCTGATATTGAGGTaGGAAAGACTGGGACAAACTGTCTATCCTATCTTC +
Preference number: 6 (lower is better)
Translates to: IYCRFYSFLILR*ERLGQTVYPIF
Trigger: GAAGATAGGATAGACAGTTTGTCCCAGTCTTTCCCACCTCAATATCAGGAAGCTGTAGAACCTACAGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397786.7
ENST00000583958.1
CDS CAA 72 bp TATTGCATTCTTGCCAAACTCTATCCACCACATGATTaGCTAATTTTCTGGGTATTTTCCCACCATGGTGGC +
Preference number: 6 (lower is better)
Translates to: YCILAKLYPPHD*LIFWVFSHHGG
Trigger: GCCACCATGGTGGGAAAATACCCAGAAAATTAGCAAATCATGTGGTGGATAGAGTTTGGCAAGAATGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397786.7
ENST00000578132.1
ENST00000581994.1
ENST00000583958.1
CDS CAA 72 bp CTGGGGATAGATTTCTCTATCTTCATGCTTCACAGGTaGCAACAGGTACTGACAAGGAATAATCTGTACAGA +
Preference number: 6 (lower is better)
Translates to: LGIDFSIFMLHR*QQVLTRNNLYR
Trigger: TCTGTACAGATTATTCCTTGTCAGTACCTGTTGCAACCTGTGAAGCATGAAGATAGAGAAATCTATCCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CAA 90 bp AATCGATCGGGAAATAATCTACCTCAAACAACTGCAATTTGTTCTTaGTGTGGCTTCAACAAAATCCCAGGATGCCACTTTAGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: NRSGNNLPQTTAICS*CGFNKIPGCHFSSC
Trigger: ACAGCTGCTAAAGTGGCATCCTGGGATTTTGTTGAAGCCACACAAAGAACAAATTGCAGTTGTTTGAGGTAGATTATTTCCCGATCGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578132.1
ENST00000581994.1
CDS TCA 72 bp ATCCCATCTGTTAACAGTCGAGAAACAGGTCTATGTTaGCCTAATCGACAGGACTCATATATTGCAGTAAGA +
Preference number: 6 (lower is better)
Translates to: IPSVNSRETGLC*PNRQDSYIAVR
Trigger: TCTTACTGCAATATATGAGTCCTGTCGATTAGGTCAACATAGACCTGTTTCTCGACTGTTAACAGATGGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CAA 72 bp GAGATTTTTGTGCCTCAAACAACTGCAATTTGTTCTTaGTGTGGCTTCAACAAAATCCCAGGATGCCACTTT +
Preference number: 6 (lower is better)
Translates to: EIFVPQTTAICS*CGFNKIPGCHF
Trigger: AAAGTGGCATCCTGGGATTTTGTTGAAGCCACACAAAGAACAAATTGCAGTTGTTTGAGGCACAAAAATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397786.7
ENST00000583958.1
CDS CAA 72 bp TCATACTGCCAAAGGGTGGAAACGAAGGTAGTTTATTaGATGATACTCCACTATTCAAGTTGGAGGATGATG +
Preference number: 6 (lower is better)
Translates to: SYCQRVETKVVY*MILHYSSWRMM
Trigger: CATCATCCTCCAACTTGAATAGTGGAGTATCATCAAATAAACTACCTTCGTTTCCACCCTTTGGCAGTATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CAA 90 bp CATTACTGTTCATACTGCCAAAGGGTGGAAACGAAGGTAGTTTATTaGATGATACTCCACTATTCAAGTTGGAGGATGATGAAGATGAAG +
Preference number: 6 (lower is better)
Translates to: HYCSYCQRVETKVVY*MILHYSSWRMMKMK
Trigger: CTTCATCTTCATCATCCTCCAACTTGAATAGTGGAGTATCATCAAATAAACTACCTTCGTTTCCACCCTTTGGCAGTATGAACAGTAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS TCA 72 bp TGTTGGCATTTGATAAAAATGTTGACTCTGAGGAGTTaGAGGTGTTTTAGTCACTCCTTCATCAACCACATC +
Preference number: 6 (lower is better)
Translates to: CWHLIKMLTLRS*RCFSHSFINHI
Trigger: GATGTGGTTGATGAAGGAGTGACTAAAACACCTTCAACTCCTCAGAGTCAACATTTTTATCAAATGCCAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397786.7
ENST00000583958.1
CDS GCA 72 bp TCCCAAAAGAAGTATGAGTTTGAGGTGTATAAGCAGTaGCATATTCTTGATCCATATTACTTCCATCACCCT +
Preference number: 6 (lower is better)
Translates to: SQKKYEFEVYKQ*HILDPYYFHHP
Trigger: AGGGTGATGGAAGTAATATGGATCAAGAATATGGCACTGCTTATACACCTCAAACTCATACTTCTTTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397786.7
CDS CCA 72 bp TTTTCTTTGGGAACTTGTAATACTTCCAGGCTATATTaGCTTCATCTTCTTCCAAGTTTACTGCTGTACCAA +
Preference number: 6 (lower is better)
Translates to: FSLGTCNTSRLY*LHLLPSLLLYQ
Trigger: TTGGTACAGCAGTAAACTTGGAAGAAGATGAAGCCAATATAGCCTGGAAGTATTACAAGTTCCCAAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397786.7
ENST00000583958.1
CDS CAA 72 bp TCTTCAGACTACCAAAATGGAACAAATTACGTACCATaGTTGGGATTGAAAGCTAAATCCAAATTTTCAGTG +
Preference number: 6 (lower is better)
Translates to: SSDYQNGTNYVP*LGLKAKSKFSV
Trigger: CACTGAAAATTTGGATTTAGCTTTCAATCCCAACAATGGTACGTAATTTGTTCCATTTTGGTAGTCTGAAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582786.1
CDS CAA 72 bp TCATACAGACAGGGTGATGGAGTAAATAATAACAGTTaGGAAATATGGCTAAGGAAATTACTTGTACTACAC +
Preference number: 6 (lower is better)
Translates to: SYRQGDGVNNNS*EIWLRKLLVLH
Trigger: GTGTAGTACAAGTAATTTCCTTAGCCATATTTCCAAACTGTTATTATTTACTCCATCACCCTGTCTGTATGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581994.1