RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MCM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000112118

Ensembl transcript IDs: ENST00000229854.12, ENST00000419835.8, ENST00000421471.1, ENST00000476448.1, ENST00000596288.7, ENST00000616552.4

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTTTTaGAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCCTC +
Preference number: 1 (lower is better)
Translates to: WVCVGWEVGRMSQCF*NEDAIVIVLSHCLL
Trigger: GAGGAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR TCA 90 bp TTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTTTTGCAATaGAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCCTCTTTCC +
Preference number: 1 (lower is better)
Translates to: LCGMGSRADEPVLLQ*RCNSHCPLPLSPLS
Trigger: GGAAAGAGGAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR GCA 90 bp TACAATTGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTaGTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGT +
Preference number: 1 (lower is better)
Translates to: YNWVCVGWEVGRMSQ*FCNEDAIVIVLSHC
Trigger: ACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAACCCAATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR GCA 90 bp GGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTaGAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTCAGAGCTTC +
Preference number: 1 (lower is better)
Translates to: GLFCDTIHIHLNWCY*KESFLDLHDVPQSF
Trigger: GAAGCTCTGAGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR GCA 90 bp ATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTaGTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTCAG +
Preference number: 1 (lower is better)
Translates to: ILGLFCDTIHIHLNW*YCKESFLDLHDVPQ
Trigger: CTGAGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR CCA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTaGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCT +
Preference number: 1 (lower is better)
Translates to: WILGLFCDTIHIHLN*CYCKESFLDLHDVP
Trigger: AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR CCA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCGGGTCAGGGAGAGGGTaGGAAACACAGAACAAACTC +
Preference number: 2 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFGSGRG*ETQNKL
Trigger: GAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCC...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR TCA 90 bp GAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAAGTGCTCCATGGCAGCTTTCATaGCCCATTCCCAAAGGGTCC +
Preference number: 2 (lower is better)
Translates to: ELLSTNWNHPKPSLDQSAPWQLS*PIPKGS
Trigger: GGACCCTTTGGGAATGGGTCATGAAAGCTGCCATGG...AGCACTTTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR GCA 90 bp TTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAGGGCGGATGAGCCAGTaGTTTTGCAATGAAGATGCA +
Preference number: 2 (lower is better)
Translates to: LTCMTCLRASLHQLEPPKGRMSQ*FCNEDA
Trigger: TGCATCTTCATTGCAAAAGCACTGGCTCATCCGCCC...TTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR TCA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCCCATGGCAGCTTTCATaGCCCATTCCCAAAGGGTCC +
Preference number: 2 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLPWQLS*PIPKGS
Trigger: GGACCCTTTGGGAATGGGTCATGAAAGCTGCCATGG...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR CCA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTCTTCTCTCCACCAATTaGAACCACCCAAAGCCTAGT +
Preference number: 2 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPLLSTN*NHPKPS
Trigger: ACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAG...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR CAA 90 bp CAGTTGTGCCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATaGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTT +
Preference number: 2 (lower is better)
Translates to: QLCPQKYSEVICYLQ*GLCGMGSRADEPVL
Trigger: AAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAACCCAATTGTAAATAACATATGACTTCTGAGTACTTTTGGGGGCACAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR GCA 90 bp TTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAATGAGCCAGTGCTTTTaGAATGAAGATGCAATAGTC +
Preference number: 2 (lower is better)
Translates to: LTCMTCLRASLHQLEPPKMSQCF*NEDAIV
Trigger: GACTATTGCATCTTCATTGCAAAAGCACTGGCTCAT...TTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR TCA 90 bp CCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATGGGTCCACCGAGTCCTaGACTCAGCTTCATCACCAA +
Preference number: 2 (lower is better)
Translates to: PPKVLRSHMLFTIGFVWDGSTES*TQLHHQ
Trigger: TTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCC...ATCCCACACAAACCCAATTGTAAATAACATATGACTTCTGAGTACTTTTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR CAA 90 bp CAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTaGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGGAA +
Preference number: 2 (lower is better)
Translates to: QYIFTLTGATAKKAF*TCMTCLRASLHQLE
Trigger: TTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR TCA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCGGGTCCACCGAGTCCTaGACTCAGCTTCATCACCAA +
Preference number: 2 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCGSTES*TQLHHQ
Trigger: TTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCC...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR GCA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTTGACCTGCATGACGTaGCTCAGAGCTTCTCTCCAC +
Preference number: 2 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYLTCMT*LRASLH
Trigger: GTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR CCA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCGGGTCAGGGAGAGGGTaGGAAACACAGAACAAACTC +
Preference number: 2 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESGSGRG*ETQNKL
Trigger: GAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCC...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR CCA 90 bp TGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTCTTCTCTCCACCAATTaGAACCACCCAAAGCCTAGT +
Preference number: 2 (lower is better)
Translates to: CFVIQYIFTLTGATAKKALLSTN*NHPKPS
Trigger: ACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAG...AGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR TCA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCCCAGTGCTTTTGCAATaGAGATGCAATAGTCATTGT +
Preference number: 2 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFPVLLQ*RCNSHC
Trigger: ACAATGACTATTGCATCTTCATTGCAAAAGCACTGG...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR GCA 72 bp GCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTaGCTCAGAGCTTCTCTCCACCAATTGGAACCACCC +
Preference number: 3 (lower is better)
Translates to: ATAKKAFLTCMT*LRASLHQLEPP
Trigger: GGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR GCA 72 bp GTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTaGTTTTGCAATGAAGATGCAATAGTCATTGTCCTC +
Preference number: 3 (lower is better)
Translates to: VCVGWEVGRMSQ*FCNEDAIVIVL
Trigger: GAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR CAA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTTATTTACAATTGGGTTaGTGTGGGATGGGAAGTAGG +
Preference number: 3 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPYLQLG*CGMGSR
Trigger: CCTACTTCCCATCCCACACAAACCCAATTGTAAATA...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR CAA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCATTCCTCGCCTTCAGTaGAATTCAACACTGTTAAGG +
Preference number: 3 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLIPRLQ*NSTLLR
Trigger: CCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAAT...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR CAA 90 bp GAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAAGTGCTATATGTTATTTACAATaGGGTTTGTGTGGGATGGGA +
Preference number: 3 (lower is better)
Translates to: ELLSTNWNHPKPSLDQSAICYLQ*GLCGMG
Trigger: TCCCATCCCACACAAACCCAATTGTAAATAACATAT...AGCACTTTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR CCA 72 bp AAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATaGGAAGTAGGGCGGATGAGCCAGTGCTTTTGCAAT +
Preference number: 3 (lower is better)
Translates to: KSYVIYNWVCVG*EVGRMSQCFCN
Trigger: ATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAACCCAATTGTAAATAACATATGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR GCA 72 bp TGTGATACAATACATATTCACCTTAACTGGTGCTACTaGAAAGAAAGCTTTCTTGACCTGCATGACGTGCCT +
Preference number: 3 (lower is better)
Translates to: CDTIHIHLNWCY*KESFLDLHDVP
Trigger: AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR-3UTR CAA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACATTCCTCGCCTTCAGTaGAATTCAACACTGTTAAGG +
Preference number: 3 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYIPRLQ*NSTLLR
Trigger: CCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAAT...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
3UTR GCA 72 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTaGTACTGCAAAGAAAGCTTTCTTGACCTGCATGAC +
Preference number: 3 (lower is better)
Translates to: LFCDTIHIHLNW*YCKESFLDLHD
Trigger: GTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCGGGGAGCTGGCCGGCTaGGGCCTTCTCCGGCATCTC +
Preference number: 4 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFGELAG*GLLRHL
Trigger: GAGATGCCGGAGAAGGCCCCAGCCGGCCAGCTCCCC...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCACAGAGCGGGGGAGCTaGCCGGCTGGGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFTERGS*PAGAFS
Trigger: GGAGAAGGCCCCAGCCGGCCAGCTCCCCCGCTCTGT...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp ACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCAACATTCGGGGAGCTGGCCGGCTaGGGCCTTCTCCGGCATCTC +
Preference number: 4 (lower is better)
Translates to: THSQRVHRVLNSASSPTFGELAG*GLLRHL
Trigger: GAGATGCCGGAGAAGGCCCCAGCCGGCCAGCTCCCC...GAATGTTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGCAGGACCATGGCCCCTaGTTCCAGACGGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HCLLFPHPMAAFMTHSQRQDHGP*FQTALS
Trigger: GGAGAGCGCCGTCTGGAAGCAGGGGCCATGGTCCTG...CCTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGTGGAGGTTCCCAGGATaGCTCCACCCCGGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: QGEGGKHRTNSLGTTQVQWRFPG*LHPGAK
Trigger: TTTCGCGCCGGGGTGGAGTCATCCTGGGAACCTCCA...CTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229854.12
ENST00000616552.4
CDS-3UTR GCA 90 bp ACTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCACCCGCCATGCCCGCTaGCAAAGAACTACCTCCACC +
Preference number: 4 (lower is better)
Translates to: TWVRERVGNTEQTLSAQPTRHAR*QRTTST
Trigger: GGTGGAGGTAGTTCTTTGGCAGCGGGCATGGCGGGT...GGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGGTCCGCGGGGAGACGTaGTTGGAGCCAAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: HCLLFPHPMAAFMTHSQRVRGET*LEPKLP
Trigger: AGGCAGCTTTGGCTCCAAGCACGTCTCCCCGCGGAC...CCTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCGTCCGCGGGGAGACGTaGTTGGAGCCAAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLVRGET*LEPKLP
Trigger: AGGCAGCTTTGGCTCCAAGCACGTCTCCCCGCGGAC...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAGCGGGGAGACGTGCTTaGAGCCAAAGCTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LGSGRGWETQNKLSRHNPAGRRA*SQSCLP
Trigger: TGGAAGGCAGCTTTGGCTCCAAGCACGTCTCCCCGC...TGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTGGGGAGCTGGCCGGCTaGGGCCTTCTCCGGCATCTC +
Preference number: 4 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPGELAG*GLLRHL
Trigger: GAGATGCCGGAGAAGGCCCCAGCCGGCCAGCTCCCC...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp AAGAAAGCTTTCTTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGACAGAGCGGGGGAGCTaGCCGGCTGGGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KKAFLTCMTCLRASLHQLTERGS*PAGAFS
Trigger: GGAGAAGGCCCCAGCCGGCCAGCTCCCCCGCTCTGT...CAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAAGAAAGCTTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCCCGAAGGACATGGTCTaGGATCTCCCGATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFPKDMV*DLPILL
Trigger: GAGCAGGATCGGGAGATCTCAGACCATGTCCTTCGG...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGACCCGCCATGCCCGCTaGCAAAGAACTACCTCCACC +
Preference number: 4 (lower is better)
Translates to: PLSPLSSPHGSFHDPFPKTRHAR*QRTTST
Trigger: GGTGGAGGTAGTTCTTTGGCAGCGGGCATGGCGGGT...CTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCCAGCTGCCAAAACACTaGAGCGGGCATTCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFQLPKH*SGHSAE
Trigger: CTCGGCTGAATGCCCGCTGCAGTGTTTTGGCAGCTG...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGACAGGGTTGGCAGCTaGCAAAACACTGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: PLSPLSSPHGSFHDPFPKDRVGS*QNTAAG
Trigger: GCCCGCTGCAGTGTTTTGGCAGCTGCCAACCCTGTC...CTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCCCACAGTCTTGCTCATaGGGGCCTTCGCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLPQSCS*GPSHGL
Trigger: CAGCCCATGCGAAGGCCCGCATGAGCAAGACTGTGG...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp ACTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCGCAGGTCCACAGTCTTaGTCATGCGGGCCTTCGCAT +
Preference number: 4 (lower is better)
Translates to: TWVRERVGNTEQTLSAQPAGPQS*SCGPSH
Trigger: ATGCGAAGGCCCGCATGAGCAAGACTGTGGACCTGC...GGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCGCGGGGAGACGTGCTTaGAGCCAAAGCTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLAGRRA*SQSCLP
Trigger: TGGAAGGCAGCTTTGGCTCCAAGCACGTCTCCCCGC...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCACAGAGCGGGGGAGCTaGCCGGCTGGGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLTERGS*PAGAFS
Trigger: GGAGAAGGCCCCAGCCGGCCAGCTCCCCCGCTCTGT...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGTTTCCTGGTCTGTGGTaGCAGCAGCCGTCAGACCCA +
Preference number: 4 (lower is better)
Translates to: HCLLFPHPMAAFMTHSQRFPGLW*QQPSDP
Trigger: TGGGTCTGACGGCTGCTGTCACCACAGACCAGGAAA...CCTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGTTTCCTGGTCTGTGGTaGCAGCAGCCGTCAGACCCA +
Preference number: 4 (lower is better)
Translates to: PLSPLSSPHGSFHDPFPKFPGLW*QQPSDP
Trigger: TGGGTCTGACGGCTGCTGTCACCACAGACCAGGAAA...CTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGCCGATTGACTGCGCATaGGCTTCCCGGAACACATCC +
Preference number: 4 (lower is better)
Translates to: HCLLFPHPMAAFMTHSQRPIDCA*ASRNTS
Trigger: GGATGTGTTCCGGGAAGCTCATGCGCAGTCAATCGG...CCTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGGCGATTCATGCCGATTaGCTGCGCATGAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: QGEGGKHRTNSLGTTQVQAIHAD*LRMSFP
Trigger: CGGGAAGCTCATGCGCAGTCAATCGGCATGAATCGC...CTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAACCCGCCATGCCCGCTaGCAAAGAACTACCTCCACC +
Preference number: 4 (lower is better)
Translates to: LTCMTCLRASLHQLEPPKTRHAR*QRTTST
Trigger: GGTGGAGGTAGTTCTTTGGCAGCGGGCATGGCGGGT...TTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAAGTGCTGTCCGCGGGGAGACGTaGTTGGAGCCAAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ELLSTNWNHPKPSLDQSAVRGET*LEPKLP
Trigger: AGGCAGCTTTGGCTCCAAGCACGTCTCCCCGCGGAC...AGCACTTTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGGGGATAGCTCGGGGTaGAGTGCAAAGCACATACCG +
Preference number: 4 (lower is better)
Translates to: PLSPLSSPHGSFHDPFPKGDSSG*SAKHIP
Trigger: CGGTATGTGCTTTGCACTGCACCCCGAGCTATCCCC...CTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCGGGGATAGCTCGGGGTaGAGTGCAAAGCACATACCG +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLGDSSG*SAKHIP
Trigger: CGGTATGTGCTTTGCACTGCACCCCGAGCTATCCCC...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAGACAGGGTTGGCAGCTaGCAAAACACTGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: ASELLSTNWNHPKPSLDQDRVGS*QNTAAG
Trigger: GCCCGCTGCAGTGTTTTGGCAGCTGCCAACCCTGTC...TTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGATCCTGCTCCCCAGGTaGTCTGTAACGGTGCATCCG +
Preference number: 4 (lower is better)
Translates to: PLSPLSSPHGSFHDPFPKILLPR*SVTVHP
Trigger: CGGATGCACCGTTACAGAGCACCTGGGGAGCAGGAT...CTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAACGGTGTCTGAGCTCATaGTATCCTGGCTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: LTCMTCLRASLHQLEPPKRCLSS*YPGCAG
Trigger: GCCTGCGCAGCCAGGATAGCATGAGCTCAGACACCG...TTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCACGGTGTCTGAGCTCATaGTATCCTGGCTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: SGRGWETQNKLSRHNPSSRCLSS*YPGCAG
Trigger: GCCTGCGCAGCCAGGATAGCATGAGCTCAGACACCG...TGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAGCTTCCTCTGCATCCTaGAGGTCCACAGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LGSGRGWETQNKLSRHNPASSAS*RSTVLL
Trigger: GAGCAAGACTGTGGACCTGCAGGATGCAGAGGAAGC...TGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCTGCCAGCCTTGGCAATaGTCACTCGACCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLCQPWQ*SLDPAP
Trigger: TGGAGCAGGGTCGAGTGACCATTGCCAAGGCTGGCA...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGTGCCAGCCTTGGCAATaGTCACTCGACCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QGEGGKHRTNSLGTTQVQCQPWQ*SLDPAP
Trigger: TGGAGCAGGGTCGAGTGACCATTGCCAAGGCTGGCA...CTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCTGCCGTAGACAGGGTTaGCAGCTGCCAAAACACTGC +
Preference number: 4 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFCRRQG*QLPKHC
Trigger: GCAGTGTTTTGGCAGCTGCCAACCCTGTCTACGGCA...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAATGCGGGCCTTCGCATaGGCTGTGGCCAGTCGAATC +
Preference number: 4 (lower is better)
Translates to: LTCMTCLRASLHQLEPPKMRAFA*AVASRI
Trigger: GATTCGACTGGCCACAGCCCATGCGAAGGCCCGCAT...TTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCTGGGTTTGTGTGGGATaGGAAGTAGGGCGGATGAGC +
Preference number: 4 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFWVCVG*EVGRMS
Trigger: GCTCATCCGCCCTACTTCCCATCCCACACAAACCCA...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAGATACTTGGGGCCAATaGCTTGGCCAGCTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: LGSGRGWETQNKLSRHNPDTWGQ*LGQLVK
Trigger: TTTGACCAGCTGGCCAAGTCATTGGCCCCAAGTATC...TGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGACATACCGCAGAAGCTaGGACTTGGCAACGGATGGG +
Preference number: 4 (lower is better)
Translates to: PLSPLSSPHGSFHDPFPKTYRRS*DLATDG
Trigger: CCCATCCGTTGCCAAGTCTCAGCTTCTGCGGTATGT...CTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCATTTCCTGGTCTGTGGTaGCAGCAGCCGTCAGACCCA +
Preference number: 4 (lower is better)
Translates to: SGRGWETQNKLSRHNPSSFPGLW*QQPSDP
Trigger: TGGGTCTGACGGCTGCTGTCACCACAGACCAGGAAA...TGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCACCGAAGGACATGGTCTaGGATCTCCCGATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SGRGWETQNKLSRHNPSSPKDMV*DLPILL
Trigger: GAGCAGGATCGGGAGATCTCAGACCATGTCCTTCGG...TGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp ACTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCCTGGCTGCGCAGGCGTaGATACTCTTCTGCAATGTA +
Preference number: 4 (lower is better)
Translates to: TWVRERVGNTEQTLSAQPLAAQA*ILFCNV
Trigger: TACATTGCAGAAGAGTATTCACGCCTGCGCAGCCAG...GGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCATTCCTTGGTCTCCTGTaGGTCTGCCGTCTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LGSGRGWETQNKLSRHNPFLGLL*VCRLWS
Trigger: ACTCCAAAGACGGCAGACTCACAGGAGACCAAGGAA...TGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCAGCCTGGATCTCAACTaGAGAGAAGGGCTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFSLDLN*REGLFA
Trigger: AGCGAAGAGCCCTTCTCTTCAGTTGAGATCCAGGCT...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGGGGTCCACCGAGTCCTaGACTCAGCTTCATCACCAA +
Preference number: 4 (lower is better)
Translates to: HCLLFPHPMAAFMTHSQRGSTES*TQLHHQ
Trigger: TTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCC...CCTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGGGGTCCACCGAGTCCTaGACTCAGCTTCATCACCAA +
Preference number: 4 (lower is better)
Translates to: QGEGGKHRTNSLGTTQVQGSTES*TQLHHQ
Trigger: TTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCC...CTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAAGTGCTCCACGGTACCCGCCATaGCCGCTGCCAAAGAACTAC +
Preference number: 4 (lower is better)
Translates to: ELLSTNWNHPKPSLDQSAPRYPP*PLPKNY
Trigger: GTAGTTCTTTGGCAGCGGGCATGGCGGGTACCGTGG...AGCACTTTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCCCCCACGGATGTGGCTaGCATTTTCTAGGTCTCGTT +
Preference number: 4 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFPHGCG*HFLGLV
Trigger: AACGAGACCTAGAAAATGGCAGCCACATCCGTGGGG...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCCAGGACCATGGCCCCTaGTTCCAGACGGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLQDHGP*FQTALS
Trigger: GGAGAGCGCCGTCTGGAAGCAGGGGCCATGGTCCTG...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp ACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCAACATTCATCCTGCTCCCCAGGTaGTCTGTAACGGTGCATCCG +
Preference number: 4 (lower is better)
Translates to: THSQRVHRVLNSASSPTFILLPR*SVTVHP
Trigger: CGGATGCACCGTTACAGAGCACCTGGGGAGCAGGAT...GAATGTTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAATCCTGCTCCCCAGGTaGTCTGTAACGGTGCATCCG +
Preference number: 4 (lower is better)
Translates to: LTCMTCLRASLHQLEPPKILLPR*SVTVHP
Trigger: CGGATGCACCGTTACAGAGCACCTGGGGAGCAGGAT...TTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCCTCCACAGCTTCCTCTaGATCCTGCAGGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLLHSFL*ILQVHS
Trigger: ACTGTGGACCTGCAGGATGCAGAGGAAGCTGTGGAG...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGCATGGATGCCAGCCTTaGCAATGGTCACTCGACCCT +
Preference number: 4 (lower is better)
Translates to: QGEGGKHRTNSLGTTQVQHGCQP*QWSLDP
Trigger: AGGGTCGAGTGACCATTGCCAAGGCTGGCATCCATG...CTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGCATGGATGCCAGCCTTaGCAATGGTCACTCGACCCT +
Preference number: 4 (lower is better)
Translates to: PLSPLSSPHGSFHDPFPKHGCQP*QWSLDP
Trigger: AGGGTCGAGTGACCATTGCCAAGGCTGGCATCCATG...CTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGGCATTCAGCCGAGCATaGATGCCAGCCTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: QGEGGKHRTNSLGTTQVQAFSRA*MPALAM
Trigger: CATTGCCAAGGCTGGCATCCATGCTCGGCTGAATGC...CTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGTGCCGTAGACAGGGTTaGCAGCTGCCAAAACACTGC +
Preference number: 4 (lower is better)
Translates to: QGEGGKHRTNSLGTTQVQCRRQG*QLPKHC
Trigger: GCAGTGTTTTGGCAGCTGCCAACCCTGTCTACGGCA...CTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCATGCATCCGAAGGACATaGTCTGAGATCTCCCGATCC +
Preference number: 4 (lower is better)
Translates to: LGSGRGWETQNKLSRHNPCIRRT*SEISRS
Trigger: GGATCGGGAGATCTCAGACCATGTCCTTCGGATGCA...TGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCACCTTCGCATGGGCTGTaGCCAGTCGAATCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LGSGRGWETQNKLSRHNPPSHGL*PVESEF
Trigger: AAACTCTGATTCGACTGGCCACAGCCCATGCGAAGG...TGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCACCCATCTTTGGCATCTaGCTGGCGAGTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LGSGRGWETQNKLSRHNPPIFGI*LASLPS
Trigger: AGAAGGAAGACTCGCCAGCCAGATGCCAAAGATGGG...TGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGTGGGTTTGTGTGGGATaGGAAGTAGGGCGGATGAGC +
Preference number: 4 (lower is better)
Translates to: QGEGGKHRTNSLGTTQVQWVCVG*EVGRMS
Trigger: GCTCATCCGCCCTACTTCCCATCCCACACAAACCCA...CTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGCATCTCCTGGATGGTaGTGGTCTGGTGATCCTTGT +
Preference number: 4 (lower is better)
Translates to: PLSPLSSPHGSFHDPFPKASPGW*WSGDPC
Trigger: ACAAGGATCACCAGACCATCACCATCCAGGAGATGC...CTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp ACTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCGTCATAGGGGTCGTATaGATCCCCATCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: TWVRERVGNTEQTLSAQPVIGVV*IPIFGI
Trigger: GATGCCAAAGATGGGGATTCATACGACCCCTATGAC...GGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCCCTCCTCTGTGTCACTaGAGTCATAGGGGTCGTATG +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLPPLCH*SHRGRM
Trigger: CATACGACCCCTATGACTTCAGTGACACAGAGGAGG...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp AATTGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTTTTGCAATCCGATTGACTGCGCATaGGCTTCCCGGAACACATCC +
Preference number: 4 (lower is better)
Translates to: NWVCVGWEVGRMSQCFCNPIDCA*ASRNTS
Trigger: GGATGTGTTCCGGGAAGCTCATGCGCAGTCAATCGG...ATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAACCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp GAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAAGTGCTCCGATTGACTGCGCATaGGCTTCCCGGAACACATCC +
Preference number: 4 (lower is better)
Translates to: ELLSTNWNHPKPSLDQSAPIDCA*ASRNTS
Trigger: GGATGTGTTCCGGGAAGCTCATGCGCAGTCAATCGG...AGCACTTTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp AATTGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTTTTGCAATGCGATTCATGCCGATTaGCTGCGCATGAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: NWVCVGWEVGRMSQCFCNAIHAD*LRMSFP
Trigger: CGGGAAGCTCATGCGCAGTCAATCGGCATGAATCGC...ATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAACCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp ACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCAACATTCCCATGGCAGCTTTCATaGCCCATTCCCAAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: THSQRVHRVLNSASSPTFPWQLS*PIPKGS
Trigger: GGACCCTTTGGGAATGGGTCATGAAAGCTGCCATGG...GAATGTTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAGGTATTGGTTGTCACTaGTCAGCTCCCGAACTTTGC +
Preference number: 4 (lower is better)
Translates to: LGSGRGWETQNKLSRHNPGIGCH*SAPELC
Trigger: GCAAAGTTCGGGAGCTGATCAGTGACAACCAATACC...TGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCGACAGTAGTGGACACTaGGGACGACTTTGGGACGAA +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLDSSGH*GRLWDE
Trigger: TTCGTCCCAAAGTCGTCCGCAGTGTCCACTACTGTC...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATGGTCACTCGACCCTaGTCCATCACTTCATGGATG +
Preference number: 4 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFMVTRP*SITSWM
Trigger: CATCCATGAAGTGATGGAGCAGGGTCGAGTGACCAT...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCATCAGCCGAGCATGGATaGCAGCCTTGGCAATGGTCA +
Preference number: 4 (lower is better)
Translates to: AFMTHSQRVHRVLNSASSSAEHG*QPWQWS
Trigger: TGACCATTGCCAAGGCTGGCATCCATGCTCGGCTGA...TGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAAGTGCTCAGCTGCCAAAACACTaGAGCGGGCATTCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: ELLSTNWNHPKPSLDQSAQLPKH*SGHSAE
Trigger: CTCGGCTGAATGCCCGCTGCAGTGTTTTGGCAGCTG...AGCACTTTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAACTCCACAGCTTCCTCTaGATCCTGCAGGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: LTCMTCLRASLHQLEPPKLHSFL*ILQVHS
Trigger: ACTGTGGACCTGCAGGATGCAGAGGAAGCTGTGGAG...TTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp ACTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCCTTCTCTTCCTCTTCTaGTCCTGGTCCTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: TWVRERVGNTEQTLSAQPLLFLF*SWSSWL
Trigger: AAGCCAAGAGGACCAGGAGCAGAAGAGGAAGAGAAG...GGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAATCCTTTAAGGCCCGCTaGAAGGCAACCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LTCMTCLRASLHQLEPPKSFKAR*KATSSS
Trigger: TGAGGAGCTGGTTGCCTTCCAGCGGGCCTTAAAGGA...TTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCGCAGAAGCTGAGACTTaGCAACGGATGGGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLAEAET*QRMGLL
Trigger: TAGGAGACCCATCCGTTGCCAAGTCTCAGCTTCTGC...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCCCATCACTTCATGGATaGCTGTGCGATCCATGTCAG +
Preference number: 4 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFPSLHG*LCDPCQ
Trigger: CTGACATGGATCGCACAGCCATCCATGAAGTGATGG...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCAGCATTCAGCCGAGCATaGATGCCAGCCTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: AFMTHSQRVHRVLNSASSAFSRA*MPALAM
Trigger: CATTGCCAAGGCTGGCATCCATGCTCGGCTGAATGC...TGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp ACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCAACATTCTGCCGTAGACAGGGTTaGCAGCTGCCAAAACACTGC +
Preference number: 4 (lower is better)
Translates to: THSQRVHRVLNSASSPTFCRRQG*QLPKHC
Trigger: GCAGTGTTTTGGCAGCTGCCAACCCTGTCTACGGCA...GAATGTTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAGAGCTCATGCTATCCTaGCTGCGCAGGCGTGAATAC +
Preference number: 4 (lower is better)
Translates to: ASELLSTNWNHPKPSLDQELMLS*LRRREY
Trigger: GTATTCACGCCTGCGCAGCCAGGATAGCATGAGCTC...TTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCTGTTCGGGCTGTAACTaGAGATGTCCTGGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: FHDPFPKGPPSPELSFITCSGCN*RCPGGV
Trigger: GACACCGCCAGGACATCTCCAGTTACAGCCCGAACA...GGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCATGTTCGGGCTGTAACTaGAGATGTCCTGGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: AFMTHSQRVHRVLNSASSCSGCN*RCPGGV
Trigger: GACACCGCCAGGACATCTCCAGTTACAGCCCGAACA...TGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAATGTTCGGGCTGTAACTaGAGATGTCCTGGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: LTCMTCLRASLHQLEPPKCSGCN*RCPGGV
Trigger: GACACCGCCAGGACATCTCCAGTTACAGCCCGAACA...TTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCCCCATCTTTGGCATCTaGCTGGCGAGTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLPIFGI*LASLPS
Trigger: AGAAGGAAGACTCGCCAGCCAGATGCCAAAGATGGG...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp ACTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCATGAATCCCCATCTTTaGCATCTGGCTGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: TWVRERVGNTEQTLSAQPMNPHL*HLAGES
Trigger: AGACTCGCCAGCCAGATGCCAAAGATGGGGATTCAT...GGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAATGAATCCCCATCTTTaGCATCTGGCTGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LGSGRGWETQNKLSRHNPMNPHL*HLAGES
Trigger: AGACTCGCCAGCCAGATGCCAAAGATGGGGATTCAT...TGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCCTTTCTGGGATTCCTTaGTCTCCTGTGAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLLSGIP*SPVSLP
Trigger: CGGCAGACTCACAGGAGACCAAGGAATCCCAGAAAG...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGGGTCAGGGAGAGGGTaGGAAACACAGAACAAACTC +
Preference number: 4 (lower is better)
Translates to: PLSPLSSPHGSFHDPFPKGSGRG*ETQNKL
Trigger: GAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCC...CTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp GCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAGATACTTGGGGCCAATaGCTTGGCCAGCTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: ASELLSTNWNHPKPSLDQDTWGQ*LGQLVK
Trigger: TTTGACCAGCTGGCCAAGTCATTGGCCCCAAGTATC...TTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGATCTGGGTGTCCTGCTaGTCTTCCTGGCTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: PLSPLSSPHGSFHDPFPKIWVSC*SSWLKL
Trigger: CAACTTTAGCCAGGAAGATCAGCAGGACACCCAGAT...CTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCACTGGCTGCGCAGGCGTaGATACTCTTCTGCAATGTA +
Preference number: 4 (lower is better)
Translates to: SGRGWETQNKLSRHNPSSLAAQA*ILFCNV
Trigger: TACATTGCAGAAGAGTATTCACGCCTGCGCAGCCAG...TGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTGCGATTCATGCCGATTaGCTGCGCATGAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPAIHAD*LRMSFP
Trigger: CGGGAAGCTCATGCGCAGTCAATCGGCATGAATCGC...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCAGCCTGGATCTCAACTaGAGAGAAGGGCTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: FHDPFPKGPPSPELSFITSLDLN*REGLFA
Trigger: AGCGAAGAGCCCTTCTCTTCAGTTGAGATCCAGGCT...GGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAATGCCCTCAGACACCATaGCCTGATTGTCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: LTCMTCLRASLHQLEPPKCPQTP*PDCHPA
Trigger: TGCAGGATGACAATCAGGTCATGGTGTCTGAGGGCA...TTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp ACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCAACATTCGCTTGGAGCCAAAGCTaGCTTCCAGTCCTACGTAGA +
Preference number: 4 (lower is better)
Translates to: THSQRVHRVLNSASSPTFAWSQS*LPVLRR
Trigger: TCTACGTAGGACTGGAAGGCAGCTTTGGCTCCAAGC...GAATGTTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCAGACAGTAGTGGACACTaGGGACGACTTTGGGACGAA +
Preference number: 4 (lower is better)
Translates to: AFMTHSQRVHRVLNSASSDSSGH*GRLWDE
Trigger: TTCGTCCCAAAGTCGTCCGCAGTGTCCACTACTGTC...TGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCGACAGTAGTGGACACTaGGGACGACTTTGGGACGAA +
Preference number: 4 (lower is better)
Translates to: FHDPFPKGPPSPELSFITDSSGH*GRLWDE
Trigger: TTCGTCCCAAAGTCGTCCGCAGTGTCCACTACTGTC...GGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp AATTGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTTTTGCAATCTCCACAGCTTCCTCTaGATCCTGCAGGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: NWVCVGWEVGRMSQCFCNLHSFL*ILQVHS
Trigger: ACTGTGGACCTGCAGGATGCAGAGGAAGCTGTGGAG...ATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAACCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCCTTCTCTTCCTCTTCTaGTCCTGGTCCTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLLLFLF*SWSSWL
Trigger: AAGCCAAGAGGACCAGGAGCAGAAGAGGAAGAGAAG...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCGAGGGCCACCTTGAATaGCTTCAACCTGGATTCACT +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLEGHLE*LQPGFT
Trigger: AGTGAATCCAGGTTGAAGGCATTCAAGGTGGCCCTC...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCGGGCGGATGAGCCAGTaGTTTTGCAATGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLGRMSQ*FCNEDA
Trigger: TGCATCTTCATTGCAAAAGCACTGGCTCATCCGCCC...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGGGCGGATGAGCCAGTaGTTTTGCAATGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: PLSPLSSPHGSFHDPFPKGRMSQ*FCNEDA
Trigger: TGCATCTTCATTGCAAAAGCACTGGCTCATCCGCCC...CTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp ACTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCCACTGCGGACGACTTTaGGACGAACTAGAGAACATT +
Preference number: 4 (lower is better)
Translates to: TWVRERVGNTEQTLSAQPHCGRL*DELENI
Trigger: AATGTTCTCTAGTTCGTCCCAAAGTCGTCCGCAGTG...GGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGCAGAAGCTGAGACTTaGCAACGGATGGGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: SGRGWETQNKLSRHNPSSAEAET*QRMGLL
Trigger: TAGGAGACCCATCCGTTGCCAAGTCTCAGCTTCTGC...TGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAGCAGAAGCTGAGACTTaGCAACGGATGGGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: ASELLSTNWNHPKPSLDQAEAET*QRMGLL
Trigger: TAGGAGACCCATCCGTTGCCAAGTCTCAGCTTCTGC...TTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAAGTGCTGCATTCAGCCGAGCATaGATGCCAGCCTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: ELLSTNWNHPKPSLDQSAAFSRA*MPALAM
Trigger: CATTGCCAAGGCTGGCATCCATGCTCGGCTGAATGC...AGCACTTTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCTGCATCCGAAGGACATaGTCTGAGATCTCCCGATCC +
Preference number: 4 (lower is better)
Translates to: FHDPFPKGPPSPELSFITCIRRT*SEISRS
Trigger: GGATCGGGAGATCTCAGACCATGTCCTTCGGATGCA...GGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAAGTGCTGAGCTCATGCTATCCTaGCTGCGCAGGCGTGAATAC +
Preference number: 4 (lower is better)
Translates to: ELLSTNWNHPKPSLDQSAELMLS*LRRREY
Trigger: GTATTCACGCCTGCGCAGCCAGGATAGCATGAGCTC...AGCACTTTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGTCTTTGGCATCTGGCTaGCGAGTCTTCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QGEGGKHRTNSLGTTQVQSLASG*RVFLLF
Trigger: GAAGAGAAGGAAGACTCGCCAGCCAGATGCCAAAGA...CTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp ACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCAACATTCATCTGGGTGTCCTGCTaGTCTTCCTGGCTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: THSQRVHRVLNSASSPTFIWVSC*SSWLKL
Trigger: CAACTTTAGCCAGGAAGATCAGCAGGACACCCAGAT...GAATGTTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGTCAGACACCATGACCTaGTTGTCATCCTGCATCTTG +
Preference number: 4 (lower is better)
Translates to: QGEGGKHRTNSLGTTQVQSDTMT*LSSCIL
Trigger: CAAGATGCAGGATGACAATCAGGTCATGGTGTCTGA...CTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp GAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAAGTGCTTGCCCTCAGACACCATaGCCTGATTGTCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: ELLSTNWNHPKPSLDQSACPQTP*PDCHPA
Trigger: TGCAGGATGACAATCAGGTCATGGTGTCTGAGGGCA...AGCACTTTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp AATTGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTTTTGCAATGCTTGGAGCCAAAGCTaGCTTCCAGTCCTACGTAGA +
Preference number: 4 (lower is better)
Translates to: NWVCVGWEVGRMSQCFCNAWSQS*LPVLRR
Trigger: TCTACGTAGGACTGGAAGGCAGCTTTGGCTCCAAGC...ATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAACCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAATGGTCACTCGACCCTaGTCCATCACTTCATGGATG +
Preference number: 4 (lower is better)
Translates to: ASELLSTNWNHPKPSLDQMVTRP*SITSWM
Trigger: CATCCATGAAGTGATGGAGCAGGGTCGAGTGACCAT...TTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTTCAGCCGAGCATGGATaGCAGCCTTGGCAATGGTCA +
Preference number: 4 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPSAEHG*QPWQWS
Trigger: TGACCATTGCCAAGGCTGGCATCCATGCTCGGCTGA...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp AAGAAAGCTTTCTTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGTCAGCCGAGCATGGATaGCAGCCTTGGCAATGGTCA +
Preference number: 4 (lower is better)
Translates to: KKAFLTCMTCLRASLHQLSAEHG*QPWQWS
Trigger: TGACCATTGCCAAGGCTGGCATCCATGCTCGGCTGA...CAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAAGAAAGCTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCTCATGCTATCCTGGCTaGGCAGGCGTGAATACTCTT +
Preference number: 4 (lower is better)
Translates to: FHDPFPKGPPSPELSFITSCYPG*AGVNTL
Trigger: AAGAGTATTCACGCCTGCGCAGCCAGGATAGCATGA...GGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp AAGAAAGCTTTCTTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGGCTTCCTCTGCATCCTaGAGGTCCACAGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KKAFLTCMTCLRASLHQLASSAS*RSTVLL
Trigger: GAGCAAGACTGTGGACCTGCAGGATGCAGAGGAAGC...CAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAAGAAAGCTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCACTTCTCTTCCTCTTCTaGTCCTGGTCCTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: SGRGWETQNKLSRHNPSSLLFLF*SWSSWL
Trigger: AAGCCAAGAGGACCAGGAGCAGAAGAGGAAGAGAAG...TGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCGAGGGCCACCTTGAATaGCTTCAACCTGGATTCACT +
Preference number: 4 (lower is better)
Translates to: FHDPFPKGPPSPELSFITEGHLE*LQPGFT
Trigger: AGTGAATCCAGGTTGAAGGCATTCAAGGTGGCCCTC...GGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGGGCCACCTTGAATaGCTTCAACCTGGATTCACT +
Preference number: 4 (lower is better)
Translates to: SGRGWETQNKLSRHNPSSEGHLE*LQPGFT
Trigger: AGTGAATCCAGGTTGAAGGCATTCAAGGTGGCCCTC...TGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCAAAGCTTTCTTGACCTaGATGACGTGCCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLKAFLT*MTCLRA
Trigger: AGCTCTGAGGCACGTCATGCAGGTCAAGAAAGCTTT...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCATCAGCTCCCGAACTTTaGTCTGATAAATTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LGSGRGWETQNKLSRHNPSAPEL*SDKFPG
Trigger: ACCAGGGAATTTATCAGAGCAAAGTTCGGGAGCTGA...TGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTTCCTTTAAGGCCCGCTaGAAGGCAACCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPSFKAR*KATSSS
Trigger: TGAGGAGCTGGTTGCCTTCCAGCGGGCCTTAAAGGA...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp ACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCAACATTCATGTCCCCACGGATGTaGCTGCCATTTTCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: THSQRVHRVLNSASSPTFMSPRM*LPFSRS
Trigger: AGACCTAGAAAATGGCAGCCACATCCGTGGGGACAT...GAATGTTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCAGTTGGGATCATCTGTaGCCAGGATATCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: FHDPFPKGPPSPELSFITSWDHL*PGYPQH
Trigger: GTGCTGTGGATATCCTGGCCACAGATGATCCCAACT...GGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAATTCCTCTTCTGCTCCTaGTCCTCTTGGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ASELLSTNWNHPKPSLDQFLFCS*SSWLFS
Trigger: GGAGAAAAGCCAAGAGGACCAGGAGCAGAAGAGGAA...TTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAATCTTTGGCATCTGGCTaGCGAGTCTTCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ASELLSTNWNHPKPSLDQSLASG*RVFLLF
Trigger: GAAGAGAAGGAAGACTCGCCAGCCAGATGCCAAAGA...TTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGCTCAACTCCACTTTCTaGGATTCCTTGGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PLSPLSSPHGSFHDPFPKLNSTF*DSLVSC
Trigger: ACAGGAGACCAAGGAATCCCAGAAAGTGGAGTTGAG...CTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp AAGAAAGCTTTCTTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGTGGGTTTGTGTGGGATaGGAAGTAGGGCGGATGAGC +
Preference number: 4 (lower is better)
Translates to: KKAFLTCMTCLRASLHQLWVCVG*EVGRMS
Trigger: GCTCATCCGCCCTACTTCCCATCCCACACAAACCCA...CAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAAGAAAGCTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGCTTCTCTCCACCAATTaGAACCACCCAAAGCCTAGT +
Preference number: 4 (lower is better)
Translates to: HCLLFPHPMAAFMTHSQRLLSTN*NHPKPS
Trigger: ACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAG...CCTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCGCAGAGAAAGAGGGCTaGGCATCCTTGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLAEKEG*ASLLIC
Trigger: GCAGATGAGCAAGGATGCTCAGCCCTCTTTCTCTGC...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCAGAGGATTGCTTTCTTaGCATAGTCATGCCCATGGA +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLRGLLS*HSHAHG
Trigger: TCCATGGGCATGACTATGTCAAGAAAGCAATCCTCT...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGCTATTAGAAGAATATTaGTGTCCCCACGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: QGEGGKHRTNSLGTTQVQLLEEY*CPHGCG
Trigger: GCCACATCCGTGGGGACATCAATATTCTTCTAATAG...CTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCTTCATCTTCTGTCTCTaGTTCATCCTCACTTCGCTT +
Preference number: 4 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFFIFCL*FILTSL
Trigger: AAGCGAAGTGAGGATGAATCAGAGACAGAAGATGAA...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGCAGGTCATTCACATTaGCAATCAGCCGGTATTGGT +
Preference number: 4 (lower is better)
Translates to: SGRGWETQNKLSRHNPSSAGHSH*QSAGIG
Trigger: ACCAATACCGGCTGATTGTCAATGTGAATGACCTGC...TGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp ACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCAACATTCGCAGGTCATTCACATTaGCAATCAGCCGGTATTGGT +
Preference number: 4 (lower is better)
Translates to: THSQRVHRVLNSASSPTFAGHSH*QSAGIG
Trigger: ACCAATACCGGCTGATTGTCAATGTGAATGACCTGC...GAATGTTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCGCATCCTTGCTCATCTaGTTAACATTACAGGCAATC +
Preference number: 4 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFASLLI*LTLQAI
Trigger: GATTGCCTGTAATGTTAAGCAGATGAGCAAGGATGC...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp ACTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCCTTCTTCATGAATGCTaGACTCACCATCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TWVRERVGNTEQTLSAQPLLHEC*THHLLL
Trigger: AAGGAGAAGATGGTGAGTGCAGCATTCATGAAGAAG...GGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp ACTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCGTACTTCTTCATGAATaGTGCACTCACCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: TWVRERVGNTEQTLSAQPVLLHE*CTHHLL
Trigger: GAGAAGATGGTGAGTGCAGCATTCATGAAGAAGTAC...GGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCGTACTTCTTCATGAATaGTGCACTCACCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFVLLHE*CTHHLL
Trigger: GAGAAGATGGTGAGTGCAGCATTCATGAAGAAGTAC...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTTTGACCTGCATGACGTaGCTCAGAGCTTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPLTCMT*LRASLH
Trigger: GTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAAAAGCTTTCTTGACCTaGATGACGTGCCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LTCMTCLRASLHQLEPPKKAFLT*MTCLRA
Trigger: AGCTCTGAGGCACGTCATGCAGGTCAAGAAAGCTTT...TTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp ACTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAATGACTTGGCCAGCTaGTCAAAGATATCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: TWVRERVGNTEQTLSAQPNDLAS*SKISLD
Trigger: ATCCAAGGATATCTTTGACCAGCTGGCCAAGTCATT...GGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAATTGGGGCCAATGACTTaGCCAGCTGGTCAAAGATAT +
Preference number: 4 (lower is better)
Translates to: ASELLSTNWNHPKPSLDQLGPMT*PAGQRY
Trigger: ATATCTTTGACCAGCTGGCCAAGTCATTGGCCCCAA...TTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCATTGGGGCCAATGACTTaGCCAGCTGGTCAAAGATAT +
Preference number: 4 (lower is better)
Translates to: SGRGWETQNKLSRHNPSSLGPMT*PAGQRY
Trigger: ATATCTTTGACCAGCTGGCCAAGTCATTGGCCCCAA...TGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp AATTGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTTTTGCAATATGTCCCCACGGATGTaGCTGCCATTTTCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: NWVCVGWEVGRMSQCFCNMSPRM*LPFSRS
Trigger: AGACCTAGAAAATGGCAGCCACATCCGTGGGGACAT...ATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAACCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAAGTGCTAGTTGGGATCATCTGTaGCCAGGATATCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: ELLSTNWNHPKPSLDQSASWDHL*PGYPQH
Trigger: GTGCTGTGGATATCCTGGCCACAGATGATCCCAACT...AGCACTTTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp AAGAAAGCTTTCTTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGCCTTCGCATGGGCTGTaGCCAGTCGAATCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: KKAFLTCMTCLRASLHQLPSHGL*PVESEF
Trigger: AAACTCTGATTCGACTGGCCACAGCCCATGCGAAGG...CAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAAGAAAGCTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCTTGCTCAGAGCAGCCTaGATCTCAACTGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: FHDPFPKGPPSPELSFITLLRAA*ISTEEK
Trigger: CTTCTCTTCAGTTGAGATCCAGGCTGCTCTGAGCAA...GGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCACTTCTCTCCACCAATTaGAACCACCCAAAGCCTAGT +
Preference number: 4 (lower is better)
Translates to: SGRGWETQNKLSRHNPSSLLSTN*NHPKPS
Trigger: ACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAG...TGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAACAATCAGCCGGTATTaGTTGTCACTGATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SGRGWETQNKLSRHNPSSTISRY*LSLISS
Trigger: GGAGCTGATCAGTGACAACCAATACCGGCTGATTGT...TGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp GCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCAAGAGGATTGCTTTCTTaGCATAGTCATGCCCATGGA +
Preference number: 4 (lower is better)
Translates to: AFMTHSQRVHRVLNSASSRGLLS*HSHAHG
Trigger: TCCATGGGCATGACTATGTCAAGAAAGCAATCCTCT...TGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCAGAGGATTGCTTTCTTaGCATAGTCATGCCCATGGA +
Preference number: 4 (lower is better)
Translates to: FHDPFPKGPPSPELSFITRGLLS*HSHAHG
Trigger: TCCATGGGCATGACTATGTCAAGAAAGCAATCCTCT...GGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCACTATTAGAAGAATATTaGTGTCCCCACGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: SGRGWETQNKLSRHNPSSLLEEY*CPHGCG
Trigger: GCCACATCCGTGGGGACATCAATATTCTTCTAATAG...TGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCTTCATCTTCTGTCTCTaGTTCATCCTCACTTCGCTT +
Preference number: 4 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLFIFCL*FILTSL
Trigger: AAGCGAAGTGAGGATGAATCAGAGACAGAAGATGAA...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTGTCATAGGGGTCGTATaGATCCCCATCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPVIGVV*IPIFGI
Trigger: GATGCCAAAGATGGGGATTCATACGACCCCTATGAC...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCAGCCTGGATCTCAACTaGAGAGAAGGGCTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLSLDLN*REGLFA
Trigger: AGCGAAGAGCCCTTCTCTTCAGTTGAGATCCAGGCT...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAATCAGCTCCCGAACTTTaGTCTGATAAATTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LTCMTCLRASLHQLEPPKSAPEL*SDKFPG
Trigger: ACCAGGGAATTTATCAGAGCAAAGTTCGGGAGCTGA...TTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCATATAAGCATTATGATTaGCTGAGTTCTCTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: LGSGRGWETQNKLSRHNPYKHYD*LSSLRS
Trigger: CGACCTCAGAGAACTCAGCCAATCATAATGCTTATA...TGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229854.12
ENST00000616552.4
CDS-3UTR CCA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTATGTCCCCACGGATGTaGCTGCCATTTTCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPMSPRM*LPFSRS
Trigger: AGACCTAGAAAATGGCAGCCACATCCGTGGGGACAT...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGAGAGCTCATGCTATCCTaGCTGCGCAGGCGTGAATAC +
Preference number: 4 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGELMLS*LRRREY
Trigger: GTATTCACGCCTGCGCAGCCAGGATAGCATGAGCTC...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp AAGAAAGCTTTCTTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGTTCCTCTTCTGCTCCTaGTCCTCTTGGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: KKAFLTCMTCLRASLHQLFLFCS*SSWLFS
Trigger: GGAGAAAAGCCAAGAGGACCAGGAGCAGAAGAGGAA...CAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAAGAAAGCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp AAGAAAGCTTTCTTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGATGAATCCCCATCTTTaGCATCTGGCTGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: KKAFLTCMTCLRASLHQLMNPHL*HLAGES
Trigger: AGACTCGCCAGCCAGATGCCAAAGATGGGGATTCAT...CAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAAGAAAGCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp GAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAAGTGCTTTGCTCAGAGCAGCCTaGATCTCAACTGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: ELLSTNWNHPKPSLDQSALLRAA*ISTEEK
Trigger: CTTCTCTTCAGTTGAGATCCAGGCTGCTCTGAGCAA...AGCACTTTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGATTCCTTGGTCTCCTGTaGGTCTGCCGTCTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGFLGLL*VCRLWS
Trigger: ACTCCAAAGACGGCAGACTCACAGGAGACCAAGGAA...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCGGTATTGGTTGTCACTaGTCAGCTCCCGAACTTTGC +
Preference number: 4 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLGIGCH*SAPELC
Trigger: GCAAAGTTCGGGAGCTGATCAGTGACAACCAATACC...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCGAGCAAGCAGAGGATTaGTTTCTTGACATAGTCATG +
Preference number: 4 (lower is better)
Translates to: FHDPFPKGPPSPELSFITEQAED*FLDIVM
Trigger: CATGACTATGTCAAGAAAGCAATCCTCTGCTTGCTC...GGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGACCCCACGGATGTGGCTaGCATTTTCTAGGTCTCGTT +
Preference number: 4 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGPHGCG*HFLGLV
Trigger: AACGAGACCTAGAAAATGGCAGCCACATCCGTGGGG...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTCAGGACCATGGCCCCTaGTTCCAGACGGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: CFVIQYIFTLTGATAKKAQDHGP*FQTALS
Trigger: GGAGAGCGCCGTCTGGAAGCAGGGGCCATGGTCCTG...AGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATGACAGGGTTGGCAGCTaGCAAAACACTGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: PPKVLRSHMLFTIGFVWDDRVGS*QNTAAG
Trigger: GCCCGCTGCAGTGTTTTGGCAGCTGCCAACCCTGTC...ATCCCACACAAACCCAATTGTAAATAACATATGACTTCTGAGTACTTTTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCACTTCTTCATGAATGCTaGACTCACCATCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SGRGWETQNKLSRHNPSSLLHEC*THHLLL
Trigger: AAGGAGAAGATGGTGAGTGCAGCATTCATGAAGAAG...TGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCAGTACTTCTTCATGAATaGTGCACTCACCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: AFMTHSQRVHRVLNSASSVLLHE*CTHHLL
Trigger: GAGAAGATGGTGAGTGCAGCATTCATGAAGAAGTAC...TGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATCCACAGTCTTGCTCATaGGGGCCTTCGCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: PPKVLRSHMLFTIGFVWDPQSCS*GPSHGL
Trigger: CAGCCCATGCGAAGGCCCGCATGAGCAAGACTGTGG...ATCCCACACAAACCCAATTGTAAATAACATATGACTTCTGAGTACTTTTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGATTGACCTGCATGACGTaGCTCAGAGCTTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGLTCMT*LRASLH
Trigger: GTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCTCTTTGGCATCTGGCTaGCGAGTCTTCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLSLASG*RVFLLF
Trigger: GAAGAGAAGGAAGACTCGCCAGCCAGATGCCAAAGA...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGACCCATCTTTGGCATCTaGCTGGCGAGTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGPIFGI*LASLPS
Trigger: AGAAGGAAGACTCGCCAGCCAGATGCCAAAGATGGG...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGACTTTCTGGGATTCCTTaGTCTCCTGTGAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGLSGIP*SPVSLP
Trigger: CGGCAGACTCACAGGAGACCAAGGAATCCCAGAAAG...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTCTCAACTCCACTTTCTaGGATTCCTTGGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPLNSTF*DSLVSC
Trigger: ACAGGAGACCAAGGAATCCCAGAAAGTGGAGTTGAG...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTGGAGGTTCCCAGGATaGCTCCACCCCGGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESWRFPG*LHPGAK
Trigger: TTTCGCGCCGGGGTGGAGTCATCCTGGGAACCTCCA...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229854.12
ENST00000616552.4
CDS-3UTR TCA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGAGTCATAGGGGTCGTATaGATCCCCATCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGVIGVV*IPIFGI
Trigger: GATGCCAAAGATGGGGATTCATACGACCCCTATGAC...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp ACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCAACATTCCCAGTGCTTTTGCAATaGAGATGCAATAGTCATTGT +
Preference number: 4 (lower is better)
Translates to: THSQRVHRVLNSASSPTFPVLLQ*RCNSHC
Trigger: ACAATGACTATTGCATCTTCATTGCAAAAGCACTGG...GAATGTTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp GCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCAATGAGCCAGTGCTTTTaGAATGAAGATGCAATAGTC +
Preference number: 4 (lower is better)
Translates to: AFMTHSQRVHRVLNSASSMSQCF*NEDAIV
Trigger: GACTATTGCATCTTCATTGCAAAAGCACTGGCTCAT...TGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGAGGGCGGATGAGCCAGTaGTTTTGCAATGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGGRMSQ*FCNEDA
Trigger: TGCATCTTCATTGCAAAAGCACTGGCTCATCCGCCC...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGATTCACCTTAACTGGTaGTACTGCAAAGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: PLSPLSSPHGSFHDPFPKIHLNW*YCKESF
Trigger: AAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAAT...CTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGATTCACCTTAACTGGTaGTACTGCAAAGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: QGEGGKHRTNSLGTTQVQIHLNW*YCKESF
Trigger: AAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAAT...CTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCCACTGCGGACGACTTTaGGACGAACTAGAGAACATT +
Preference number: 4 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLHCGRL*DELENI
Trigger: AATGTTCTCTAGTTCGTCCCAAAGTCGTCCGCAGTG...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCTCTCCTTTTTCTTCTTaGTCCCATGTAGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: FHDPFPKGPPSPELSFITSPFSS*SHVEGC
Trigger: ACAACCTTCTACATGGGACCAAGAAGAAAAAGGAGA...GGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGATTCCTCTTCTGCTCCTaGTCCTCTTGGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGFLFCS*SSWLFS
Trigger: GGAGAAAAGCCAAGAGGACCAGGAGCAGAAGAGGAA...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCGGATGTACTTCTTCATaGATGCTGCACTCACCATCT +
Preference number: 4 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLGCTSS*MLHSPS
Trigger: AGATGGTGAGTGCAGCATTCATGAAGAAGTACATCC...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp AATTGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTTTTGCAATCCAGTGCTTTTGCAATaGAGATGCAATAGTCATTGT +
Preference number: 4 (lower is better)
Translates to: NWVCVGWEVGRMSQCFCNPVLLQ*RCNSHC
Trigger: ACAATGACTATTGCATCTTCATTGCAAAAGCACTGG...ATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAACCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCCCACGGTACCCGCCATaGCCGCTGCCAAAGAACTAC +
Preference number: 4 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESPRYPP*PLPKNY
Trigger: GTAGTTCTTTGGCAGCGGGCATGGCGGGTACCGTGG...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTGAGCAAGCAGAGGATTaGTTTCTTGACATAGTCATG +
Preference number: 4 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPEQAED*FLDIVM
Trigger: CATGACTATGTCAAGAAAGCAATCCTCTGCTTGCTC...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCCCACAGTCTTGCTCATaGGGGCCTTCGCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFPQSCS*GPSHGL
Trigger: CAGCCCATGCGAAGGCCCGCATGAGCAAGACTGTGG...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp AATTGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTTTTGCAATATGAGCCAGTGCTTTTaGAATGAAGATGCAATAGTC +
Preference number: 4 (lower is better)
Translates to: NWVCVGWEVGRMSQCFCNMSQCF*NEDAIV
Trigger: GACTATTGCATCTTCATTGCAAAAGCACTGGCTCAT...ATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAACCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCGCGGGGAGACGTGCTTaGAGCCAAAGCTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCAGRRA*SQSCLP
Trigger: TGGAAGGCAGCTTTGGCTCCAAGCACGTCTCCCCGC...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTAATGACTTGGCCAGCTaGTCAAAGATATCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPNDLAS*SKISLD
Trigger: ATCCAAGGATATCTTTGACCAGCTGGCCAAGTCATT...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp AATTGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTTTTGCAATCCCAATGTTCTCCATTaGAGTCTTATACTGGTCATA +
Preference number: 4 (lower is better)
Translates to: NWVCVGWEVGRMSQCFCNPNVLH*SLILVI
Trigger: TATGACCAGTATAAGACTCCAATGGAGAACATTGGG...ATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAACCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACATGCGGGCCTTCGCATaGGCTGTGGCCAGTCGAATC +
Preference number: 4 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYMRAFA*AVASRI
Trigger: GATTCGACTGGCCACAGCCCATGCGAAGGCCCGCAT...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTATGCGGGCCTTCGCATaGGCTGTGGCCAGTCGAATC +
Preference number: 4 (lower is better)
Translates to: CFVIQYIFTLTGATAKKAMRAFA*AVASRI
Trigger: GATTCGACTGGCCACAGCCCATGCGAAGGCCCGCAT...AGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGACTTCTCTCCACCAATTaGAACCACCCAAAGCCTAGT +
Preference number: 4 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGLLSTN*NHPKPS
Trigger: ACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAG...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCCCGAAGGACATGGTCTaGGATCTCCCGATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCPKDMV*DLPILL
Trigger: GAGCAGGATCGGGAGATCTCAGACCATGTCCTTCGG...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATTGCCCTCAGACACCATaGCCTGATTGTCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: PPKVLRSHMLFTIGFVWDCPQTP*PDCHPA
Trigger: TGCAGGATGACAATCAGGTCATGGTGTCTGAGGGCA...ATCCCACACAAACCCAATTGTAAATAACATATGACTTCTGAGTACTTTTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCGAGCAAGCAGAGGATTaGTTTCTTGACATAGTCATG +
Preference number: 4 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLEQAED*FLDIVM
Trigger: CATGACTATGTCAAGAAAGCAATCCTCTGCTTGCTC...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACCAGCTGCCAAAACACTaGAGCGGGCATTCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYQLPKH*SGHSAE
Trigger: CTCGGCTGAATGCCCGCTGCAGTGTTTTGGCAGCTG...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCGCAGGTCCACAGTCTTaGTCATGCGGGCCTTCGCAT +
Preference number: 4 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFAGPQS*SCGPSH
Trigger: ATGCGAAGGCCCGCATGAGCAAGACTGTGGACCTGC...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp AATTGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTTTTGCAATATTCACCTTAACTGGTaGTACTGCAAAGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: NWVCVGWEVGRMSQCFCNIHLNW*YCKESF
Trigger: AAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAAT...ATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAACCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTGCCAGCCTTGGCAATaGTCACTCGACCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESCQPWQ*SLDPAP
Trigger: TGGAGCAGGGTCGAGTGACCATTGCCAAGGCTGGCA...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTCCCAATGTTCTCCATTaGAGTCTTATACTGGTCATA +
Preference number: 4 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPPNVLH*SLILVI
Trigger: TATGACCAGTATAAGACTCCAATGGAGAACATTGGG...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp ACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCAACATTCTCTCGGATATTCATCTaGATATTGGGTTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: THSQRVHRVLNSASSPTFSRIFI*ILGLFC
Trigger: ACAAAACAAACCCAATATCCAGATGAATATCCGAGA...GAATGTTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTACATACCGCAGAAGCTaGGACTTGGCAACGGATGGG +
Preference number: 4 (lower is better)
Translates to: CFVIQYIFTLTGATAKKATYRRS*DLATDG
Trigger: CCCATCCGTTGCCAAGTCTCAGCTTCTGCGGTATGT...AGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCACATACCGCAGAAGCTaGGACTTGGCAACGGATGGG +
Preference number: 4 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCTYRRS*DLATDG
Trigger: CCCATCCGTTGCCAAGTCTCAGCTTCTGCGGTATGT...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCGGGTCCACCGAGTCCTaGACTCAGCTTCATCACCAA +
Preference number: 4 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESGSTES*TQLHHQ
Trigger: TTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCC...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCCCATGGCAGCTTTCATaGCCCATTCCCAAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESPWQLS*PIPKGS
Trigger: GGACCCTTTGGGAATGGGTCATGAAAGCTGCCATGG...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCCCATGGCAGCTTTCATaGCCCATTCCCAAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCPWQLS*PIPKGS
Trigger: GGACCCTTTGGGAATGGGTCATGAAAGCTGCCATGG...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGAGCATCCTTGCTCATCTaGTTAACATTACAGGCAATC +
Preference number: 4 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGASLLI*LTLQAI
Trigger: GATTGCCTGTAATGTTAAGCAGATGAGCAAGGATGC...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCGCTTCCTCTGCATCCTaGAGGTCCACAGTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESASSAS*RSTVLL
Trigger: GAGCAAGACTGTGGACCTGCAGGATGCAGAGGAAGC...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTCCTTTAAGGCCCGCTaGAAGGCAACCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYSFKAR*KATSSS
Trigger: TGAGGAGCTGGTTGCCTTCCAGCGGGCCTTAAAGGA...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCCATGGATGCCAGCCTTaGCAATGGTCACTCGACCCT +
Preference number: 4 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCHGCQP*QWSLDP
Trigger: AGGGTCGAGTGACCATTGCCAAGGCTGGCATCCATG...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCTCTCCTTTTTCTTCTTaGTCCCATGTAGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLSPFSS*SHVEGC
Trigger: ACAACCTTCTACATGGGACCAAGAAGAAAAAGGAGA...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACGCATCTCCTGGATGGTaGTGGTCTGGTGATCCTTGT +
Preference number: 4 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYASPGW*WSGDPC
Trigger: ACAAGGATCACCAGACCATCACCATCCAGGAGATGC...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCGATACTTGGGGCCAATaGCTTGGCCAGCTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFDTWGQ*LGQLVK
Trigger: TTTGACCAGCTGGCCAAGTCATTGGCCCCAAGTATC...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACCTGGCTGCGCAGGCGTaGATACTCTTCTGCAATGTA +
Preference number: 4 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYLAAQA*ILFCNV
Trigger: TACATTGCAGAAGAGTATTCACGCCTGCGCAGCCAG...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCCCTCCTCTGTGTCACTaGAGTCATAGGGGTCGTATG +
Preference number: 4 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESPPLCH*SHRGRM
Trigger: CATACGACCCCTATGACTTCAGTGACACAGAGGAGG...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACCCTCCTCTGTGTCACTaGAGTCATAGGGGTCGTATG +
Preference number: 4 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYPPLCH*SHRGRM
Trigger: CATACGACCCCTATGACTTCAGTGACACAGAGGAGG...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTTCCTTGGTCTCCTGTaGGTCTGCCGTCTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYFLGLL*VCRLWS
Trigger: ACTCCAAAGACGGCAGACTCACAGGAGACCAAGGAA...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATTCAGACACCATGACCTaGTTGTCATCCTGCATCTTG +
Preference number: 4 (lower is better)
Translates to: PPKVLRSHMLFTIGFVWDSDTMT*LSSCIL
Trigger: CAAGATGCAGGATGACAATCAGGTCATGGTGTCTGA...ATCCCACACAAACCCAATTGTAAATAACATATGACTTCTGAGTACTTTTGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGACCAGTGCTTTTGCAATaGAGATGCAATAGTCATTGT +
Preference number: 4 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGPVLLQ*RCNSHC
Trigger: ACAATGACTATTGCATCTTCATTGCAAAAGCACTGG...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACGCTTGGAGCCAAAGCTaGCTTCCAGTCCTACGTAGA +
Preference number: 4 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYAWSQS*LPVLRR
Trigger: TCTACGTAGGACTGGAAGGCAGCTTTGGCTCCAAGC...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCCCCCACGGATGTGGCTaGCATTTTCTAGGTCTCGTT +
Preference number: 4 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFPHGCG*HFLGLV
Trigger: AACGAGACCTAGAAAATGGCAGCCACATCCGTGGGG...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGAATGAGCCAGTGCTTTTaGAATGAAGATGCAATAGTC +
Preference number: 4 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGMSQCF*NEDAIV
Trigger: GACTATTGCATCTTCATTGCAAAAGCACTGGCTCAT...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTaGCTCAGAGCTTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFLTCMT*LRASLH
Trigger: GTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCATCCGAAGGACATaGTCTGAGATCTCCCGATCC +
Preference number: 4 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYCIRRT*SEISRS
Trigger: GGATCGGGAGATCTCAGACCATGTCCTTCGGATGCA...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCCCTTCGCATGGGCTGTaGCCAGTCGAATCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFPSHGL*PVESEF
Trigger: AAACTCTGATTCGACTGGCCACAGCCCATGCGAAGG...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTCTTTCTGGGATTCCTTaGTCTCCTGTGAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: CFVIQYIFTLTGATAKKALSGIP*SPVSLP
Trigger: CGGCAGACTCACAGGAGACCAAGGAATCCCAGAAAG...AGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp AAGAAAGCTTTCTTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGTCTCGGATATTCATCTaGATATTGGGTTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: KKAFLTCMTCLRASLHQLSRIFI*ILGLFC
Trigger: ACAAAACAAACCCAATATCCAGATGAATATCCGAGA...CAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAAGAAAGCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCATCTGGGTGTCCTGCTaGTCTTCCTGGCTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESIWVSC*SSWLKL
Trigger: CAACTTTAGCCAGGAAGATCAGCAGGACACCCAGAT...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCATGGTCACTCGACCCTaGTCCATCACTTCATGGATG +
Preference number: 4 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCMVTRP*SITSWM
Trigger: CATCCATGAAGTGATGGAGCAGGGTCGAGTGACCAT...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTCATGCTATCCTGGCTaGGCAGGCGTGAATACTCTT +
Preference number: 4 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCSCYPG*AGVNTL
Trigger: AAGAGTATTCACGCCTGCGCAGCCAGGATAGCATGA...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCCCATCACTTCATGGATaGCTGTGCGATCCATGTCAG +
Preference number: 4 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESPSLHG*LCDPCQ
Trigger: CTGACATGGATCGCACAGCCATCCATGAAGTGATGG...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCCCATCACTTCATGGATaGCTGTGCGATCCATGTCAG +
Preference number: 4 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCPSLHG*LCDPCQ
Trigger: CTGACATGGATCGCACAGCCATCCATGAAGTGATGG...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCAGTTGGGATCATCTGTaGCCAGGATATCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFSWDHL*PGYPQH
Trigger: GTGCTGTGGATATCCTGGCCACAGATGATCCCAACT...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCTCTCGGATATTCATCTaGATATTGGGTTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLSRIFI*ILGLFC
Trigger: ACAAAACAAACCCAATATCCAGATGAATATCCGAGA...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp CCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATTTCATCTTCTGTCTCTaGTTCATCCTCACTTCGCTT +
Preference number: 4 (lower is better)
Translates to: PPKVLRSHMLFTIGFVWDFIFCL*FILTSL
Trigger: AAGCGAAGTGAGGATGAATCAGAGACAGAAGATGAA...ATCCCACACAAACCCAATTGTAAATAACATATGACTTCTGAGTACTTTTGGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTCAGACACCATGACCTaGTTGTCATCCTGCATCTTG +
Preference number: 4 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFSDTMT*LSSCIL
Trigger: CAAGATGCAGGATGACAATCAGGTCATGGTGTCTGA...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp CCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATGCATCCTTGCTCATCTaGTTAACATTACAGGCAATC +
Preference number: 4 (lower is better)
Translates to: PPKVLRSHMLFTIGFVWDASLLI*LTLQAI
Trigger: GATTGCCTGTAATGTTAAGCAGATGAGCAAGGATGC...ATCCCACACAAACCCAATTGTAAATAACATATGACTTCTGAGTACTTTTGGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACAAAGCTTTCTTGACCTaGATGACGTGCCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYKAFLT*MTCLRA
Trigger: AGCTCTGAGGCACGTCATGCAGGTCAAGAAAGCTTT...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCCACTGCGGACGACTTTaGGACGAACTAGAGAACATT +
Preference number: 4 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFHCGRL*DELENI
Trigger: AATGTTCTCTAGTTCGTCCCAAAGTCGTCCGCAGTG...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTTGGGGCCAATGACTTaGCCAGCTGGTCAAAGATAT +
Preference number: 4 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCLGPMT*PAGQRY
Trigger: ATATCTTTGACCAGCTGGCCAAGTCATTGGCCCCAA...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCCTCAACTCCACTTTCTaGGATTCCTTGGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFLNSTF*DSLVSC
Trigger: ACAGGAGACCAAGGAATCCCAGAAAGTGGAGTTGAG...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTTGCTCAGAGCAGCCTaGATCTCAACTGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCLLRAA*ISTEEK
Trigger: CTTCTCTTCAGTTGAGATCCAGGCTGCTCTGAGCAA...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACGGATGTACTTCTTCATaGATGCTGCACTCACCATCT +
Preference number: 4 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYGCTSS*MLHSPS
Trigger: AGATGGTGAGTGCAGCATTCATGAAGAAGTACATCC...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR TCA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCGGATGTACTTCTTCATaGATGCTGCACTCACCATCT +
Preference number: 4 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESGCTSS*MLHSPS
Trigger: AGATGGTGAGTGCAGCATTCATGAAGAAGTACATCC...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp CCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATTCTCCTTTTTCTTCTTaGTCCCATGTAGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: PPKVLRSHMLFTIGFVWDSPFSS*SHVEGC
Trigger: ACAACCTTCTACATGGGACCAAGAAGAAAAAGGAGA...ATCCCACACAAACCCAATTGTAAATAACATATGACTTCTGAGTACTTTTGGGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR GCA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCCTTCTTCATGAATGCTaGACTCACCATCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFLLHEC*THHLLL
Trigger: AAGGAGAAGATGGTGAGTGCAGCATTCATGAAGAAG...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTAATGACTTGGCCAGCTaGTCAAAGATATCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: CFVIQYIFTLTGATAKKANDLAS*SKISLD
Trigger: ATCCAAGGATATCTTTGACCAGCTGGCCAAGTCATT...AGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTATAAGCATTATGATTaGCTGAGTTCTCTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCYKHYD*LSSLRS
Trigger: CGACCTCAGAGAACTCAGCCAATCATAATGCTTATA...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229854.12
ENST00000616552.4
CDS-3UTR CCA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTATGTTATTTACAATTaGGTTTGTGTGGGATGGGAA +
Preference number: 4 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYYVIYN*VCVGWE
Trigger: TTCCCATCCCACACAAACCCAATTGTAAATAACATA...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTATGTTATTTACAATTaGGTTTGTGTGGGATGGGAA +
Preference number: 4 (lower is better)
Translates to: CFVIQYIFTLTGATAKKAYVIYN*VCVGWE
Trigger: TTCCCATCCCACACAAACCCAATTGTAAATAACATA...AGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTATGTTATTTACAATTaGGTTTGTGTGGGATGGGAA +
Preference number: 4 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESYVIYN*VCVGWE
Trigger: TTCCCATCCCACACAAACCCAATTGTAAATAACATA...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CCA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCACCATGTGTACGAAATaGCTAAGTTTATTCAACATC +
Preference number: 4 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCTMCTK*LSLFNI
Trigger: GATGTTGAATAAACTTAGCCATTTCGTACACATGGT...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229854.12
ENST00000616552.4
CDS-3UTR CCA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACACCATGTGTACGAAATaGCTAAGTTTATTCAACATC +
Preference number: 4 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYTMCTK*LSLFNI
Trigger: GATGTTGAATAAACTTAGCCATTTCGTACACATGGT...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229854.12
ENST00000616552.4
CDS TCA 90 bp CCCGGTCACCAGGCTTCGCTTTATCCACCAAGTCATCATCCAGAATaGCGTCCACAGAGCGGGGGAGCTGGCCGGCTGGGGCCTTCTCCG +
Preference number: 5 (lower is better)
Translates to: PGHQASLYPPSHHPE*RPQSGGAGRLGPSP
Trigger: CGGAGAAGGCCCCAGCCGGCCAGCTCCCCCGCTCTGTGGACGTCATTCTGGATGATGACTTGGTGGATAAAGCGAAGCCTGGTGACCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS GCA 90 bp CCGCAGCTCCACATCGTCCAGCACCACGGTACCCGCCATGCCCGCTaGCAAAGAACTACCTCCACCAAAGTCGCGTGGAGGTTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PQLHIVQHHGTRHAR*QRTTSTKVAWRFPG
Trigger: TCCTGGGAACCTCCACGCGACTTTGGTGGAGGTAGTTCTTTGGCAGCGGGCATGGCGGGTACCGTGGTGCTGGACGATGTGGAGCTGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS GCA 90 bp GAGCCTCCCGCAGCTCCACATCGTCCAGCACCACGGTACCCGCCATaGCCGCTGCCAAAGAACTACCTCCACCAAAGTCGCGTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: EPPAAPHRPAPRYPP*PLPKNYLHQSRVEV
Trigger: AACCTCCACGCGACTTTGGTGGAGGTAGTTCTTTGGCAGCGGGCATGGCGGGTACCGTGGTGCTGGACGATGTGGAGCTGCGGGAGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS CCA 90 bp GTCATCATCCAGAATGACGTCCACAGAGCGGGGGAGCTGGCCGGCTaGGGCCTTCTCCGGCATCTCCTGGATGGTGATGGTCTGGTGATC +
Preference number: 5 (lower is better)
Translates to: VIIQNDVHRAGELAG*GLLRHLLDGDGLVI
Trigger: GATCACCAGACCATCACCATCCAGGAGATGCCGGAGAAGGCCCCAGCCGGCCAGCTCCCCCGCTCTGTGGACGTCATTCTGGATGATGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS CCA 90 bp TCCACCAAGTCATCATCCAGAATGACGTCCACAGAGCGGGGGAGCTaGCCGGCTGGGGCCTTCTCCGGCATCTCCTGGATGGTGATGGTC +
Preference number: 5 (lower is better)
Translates to: STKSSSRMTSTERGS*PAGAFSGISWMVMV
Trigger: GACCATCACCATCCAGGAGATGCCGGAGAAGGCCCCAGCCGGCCAGCTCCCCCGCTCTGTGGACGTCATTCTGGATGATGACTTGGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS GCA 90 bp TTGGGGCCTGATTCCACTTACCCTGCCGTAGACAGGGTTGGCAGCTaGCAAAACACTGCAGCGGGCATTCAGCCGAGCATGGATGCCAGC +
Preference number: 5 (lower is better)
Translates to: LGPDSTYPAVDRVGS*QNTAAGIQPSMDAS
Trigger: GCTGGCATCCATGCTCGGCTGAATGCCCGCTGCAGTGTTTTGGCAGCTGCCAACCCTGTCTACGGCAGGGTAAGTGGAATCAGGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476448.1
CDS TCA 90 bp TGCCAAAGAACTACCTCCACCAAAGTCGCGTGGAGGTTCCCAGGATaGCTCCACCCCGGCGCGAAAACTTCCGAACTCTTCCCGCCACCA +
Preference number: 5 (lower is better)
Translates to: CQRTTSTKVAWRFPG*LHPGAKTSELFPPP
Trigger: TGGTGGCGGGAAGAGTTCGGAAGTTTTCGCGCCGGGGTGGAGTCATCCTGGGAACCTCCACGCGACTTTGGTGGAGGTAGTTCTTTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000616552.4
CDS TCA 90 bp GGGGGAGCTGGCCGGCTGGGGCCTTCTCCGGCATCTCCTGGATGGTaGTGGTCTGGTGATCCTTGTAGACAGAAAGGCCATATTCTGTCT +
Preference number: 5 (lower is better)
Translates to: GGAGRLGPSPASPGW*WSGDPCRQKGHILS
Trigger: AGACAGAATATGGCCTTTCTGTCTACAAGGATCACCAGACCATCACCATCCAGGAGATGCCGGAGAAGGCCCCAGCCGGCCAGCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS GCA 90 bp TGGCAGCTGCCAAAACACTGCAGCGGGCATTCAGCCGAGCATGGATaGCAGCCTTGGCAATGGTCACTCGACCCTGCTCCATCACTTCAT +
Preference number: 5 (lower is better)
Translates to: WQLPKHCSGHSAEHG*QPWQWSLDPAPSLH
Trigger: ATGAAGTGATGGAGCAGGGTCGAGTGACCATTGCCAAGGCTGGCATCCATGCTCGGCTGAATGCCCGCTGCAGTGTTTTGGCAGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000476448.1
ENST00000596288.7
ENST00000616552.4
CDS CCA 90 bp TCTGCATCCTGCAGGTCCACAGTCTTGCTCATGCGGGCCTTCGCATaGGCTGTGGCCAGTCGAATCAGAGTTTCCAGTGTTCGGGCTGTA +
Preference number: 5 (lower is better)
Translates to: SASCRSTVLLMRAFA*AVASRIRVSSVRAV
Trigger: TACAGCCCGAACACTGGAAACTCTGATTCGACTGGCCACAGCCCATGCGAAGGCCCGCATGAGCAAGACTGTGGACCTGCAGGATGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000421471.1
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp GCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAACGCGGGGAGACGTGCTaGGAGCCAAAGCTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: ASELLSTNWNHPKPSLDQRGETC*EPKLPS
Trigger: GGAAGGCAGCTTTGGCTCCAAGCACGTCTCCCCGCG...TTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS GCA 90 bp TGGAGTCTTATACTGGTCATACCTGCCGTAGACAGGGTTGGCAGCTaGCAAAACACTGCAGCGGGCATTCAGCCGAGCATGGATGCCAGC +
Preference number: 5 (lower is better)
Translates to: WSLILVIPAVDRVGS*QNTAAGIQPSMDAS
Trigger: GCTGGCATCCATGCTCGGCTGAATGCCCGCTGCAGTGTTTTGGCAGCTGCCAACCCTGTCTACGGCAGGTATGACCAGTATAAGACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGGCATGGATGCCAGCCTaGGCAATGGTCACTCGACCC +
Preference number: 5 (lower is better)
Translates to: HCLLFPHPMAAFMTHSQRAWMPA*AMVTRP
Trigger: GGGTCGAGTGACCATTGCCAAGGCTGGCATCCATGC...CCTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGTGCAGGTCCACAGTCTaGCTCATGCGGGCCTTCGCA +
Preference number: 5 (lower is better)
Translates to: QGEGGKHRTNSLGTTQVQCRSTV*LMRAFA
Trigger: TGCGAAGGCCCGCATGAGCAAGACTGTGGACCTGCA...CTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCGGCGATTCATGCCGATaGACTGCGCATGAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFGDSCR*TAHELP
Trigger: GGGAAGCTCATGCGCAGTCAATCGGCATGAATCGCC...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS TCA 90 bp TTCGCTGTCCCGGTTGATGGATTCTGTGAGGCGATTCATGCCGATTaGCTGCGCATGAGCTTCCCGGAACACATCCAAGAGGGCCACCTT +
Preference number: 5 (lower is better)
Translates to: FAVPVDGFCEAIHAD*LRMSFPEHIQEGHL
Trigger: AAGGTGGCCCTCTTGGATGTGTTCCGGGAAGCTCATGCGCAGTCAATCGGCATGAATCGCCTCACAGAATCCATCAACCGGGACAGCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000421471.1
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCCATGCCCATGGATACTaGGGGCCAATGACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFHAHGY*GPMTWP
Trigger: TGGCCAAGTCATTGGCCCCAAGTATCCATGGGCATG...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGGGCGATTCATGCCGATaGACTGCGCATGAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: HCLLFPHPMAAFMTHSQRGDSCR*TAHELP
Trigger: GGGAAGCTCATGCGCAGTCAATCGGCATGAATCGCC...CCTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS TCA 90 bp CGGTTGATGGATTCTGTGAGGCGATTCATGCCGATTGACTGCGCATaGGCTTCCCGGAACACATCCAAGAGGGCCACCTTGAATGCCTTC +
Preference number: 5 (lower is better)
Translates to: RLMDSVRRFMPIDCA*ASRNTSKRATLNAF
Trigger: GAAGGCATTCAAGGTGGCCCTCTTGGATGTGTTCCGGGAAGCTCATGCGCAGTCAATCGGCATGAATCGCCTCACAGAATCCATCAACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000421471.1
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCATCTTCCTGGCTAAAGTaGGGATCATCTGTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LGSGRGWETQNKLSRHNPSSWLK*GSSVAR
Trigger: CCTGGCCACAGATGATCCCAACTTTAGCCAGGAAGA...TGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp AATTGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTTTTGCAATTGCAGGTCCACAGTCTaGCTCATGCGGGCCTTCGCA +
Preference number: 5 (lower is better)
Translates to: NWVCVGWEVGRMSQCFCNCRSTV*LMRAFA
Trigger: TGCGAAGGCCCGCATGAGCAAGACTGTGGACCTGCA...ATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAACCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCACTTTCTGGGATTCCTaGGTCTCCTGTGAGTCTGCC +
Preference number: 5 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFTFWDS*VSCESA
Trigger: GGCAGACTCACAGGAGACCAAGGAATCCCAGAAAGT...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAGGCGATTCATGCCGATaGACTGCGCATGAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: LTCMTCLRASLHQLEPPKGDSCR*TAHELP
Trigger: GGGAAGCTCATGCGCAGTCAATCGGCATGAATCGCC...TTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS TCA 90 bp GGTCTCGTTCCACCCCTCCCAAGAGCAAGCAGAGGATTGCTTTCTTaGCATAGTCATGCCCATGGATACTTGGGGCCAATGACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: GLVPPLPRASRGLLS*HSHAHGYLGPMTWP
Trigger: TGGCCAAGTCATTGGCCCCAAGTATCCATGGGCATGACTATGTCAAGAAAGCAATCCTCTGCTTGCTCTTGGGAGGGGTGGAACGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000476448.1
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGAGCTCCTCAAAGGCATaGTTCAGAAGCCTCGTCGTC +
Preference number: 5 (lower is better)
Translates to: HCLLFPHPMAAFMTHSQRSSSKA*FRSLVV
Trigger: GACGACGAGGCTTCTGAACAATGCCTTTGAGGAGCT...CCTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229854.12
CDS-3UTR CAA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGACGCGGGGAGACGTGCTaGGAGCCAAAGCTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGRGETC*EPKLPS
Trigger: GGAAGGCAGCTTTGGCTCCAAGCACGTCTCCCCGCG...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp ACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCAACATTCCATGCCCATGGATACTaGGGGCCAATGACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: THSQRVHRVLNSASSPTFHAHGY*GPMTWP
Trigger: TGGCCAAGTCATTGGCCCCAAGTATCCATGGGCATG...GAATGTTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTGCATGGATGCCAGCCTaGGCAATGGTCACTCGACCC +
Preference number: 5 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPAWMPA*AMVTRP
Trigger: GGGTCGAGTGACCATTGCCAAGGCTGGCATCCATGC...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGCTGCTCCTGGTCCTCTaGGCTTTTCTCCTCTTCATC +
Preference number: 5 (lower is better)
Translates to: HCLLFPHPMAAFMTHSQRLLLVL*AFLLFI
Trigger: GATGAAGAGGAGAAAAGCCAAGAGGACCAGGAGCAG...CCTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp ACTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCGCAAAGAAAGCTTTCTaGACCTGCATGACGTGCCTC +
Preference number: 5 (lower is better)
Translates to: TWVRERVGNTEQTLSAQPAKKAF*TCMTCL
Trigger: GAGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGC...GGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCATCAGCCGGTATTGGTaGTCACTGATCAGCTCCCGA +
Preference number: 5 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLISRYW*SLISSR
Trigger: TCGGGAGCTGATCAGTGACAACCAATACCGGCTGAT...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCCGCAGGTCATTCACATaGACAATCAGCCGGTATTGG +
Preference number: 5 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFRRSFT*TISRYW
Trigger: CCAATACCGGCTGATTGTCAATGTGAATGACCTGCG...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGGAAGAGGCGGGGACCTaGGGAGCATATAAGCATTAT +
Preference number: 5 (lower is better)
Translates to: HCLLFPHPMAAFMTHSQREEAGT*GAYKHY
Trigger: ATAATGCTTATATGCTCCCAAGGTCCCCGCCTCTTC...CCTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229854.12
ENST00000616552.4
CDS-3UTR CAA 90 bp CACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGACACTGCGGACGACTTaGGGACGAACTAGAGAACAT +
Preference number: 5 (lower is better)
Translates to: HCLLFPHPMAAFMTHSQRTLRTT*GRTREH
Trigger: ATGTTCTCTAGTTCGTCCCAAAGTCGTCCGCAGTGT...CCTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGACACTGCGGACGACTTaGGGACGAACTAGAGAACAT +
Preference number: 5 (lower is better)
Translates to: PLSPLSSPHGSFHDPFPKTLRTT*GRTREH
Trigger: ATGTTCTCTAGTTCGTCCCAAAGTCGTCCGCAGTGT...CTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCATCTGTCTCAAGGGGATaGTTCTCCTCATCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: LGSGRGWETQNKLSRHNPSVSRG*FSSSLV
Trigger: TACCAAGGATGAGGAGAACAATCCCCTTGAGACAGA...TGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCCTGCTCCTGGTCCTCTaGGCTTTTCTCCTCTTCATC +
Preference number: 5 (lower is better)
Translates to: FHDPFPKGPPSPELSFITLLLVL*AFLLFI
Trigger: GATGAAGAGGAGAAAAGCCAAGAGGACCAGGAGCAG...GGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp GCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCAACTTTCTGGGATTCCTaGGTCTCCTGTGAGTCTGCC +
Preference number: 5 (lower is better)
Translates to: AFMTHSQRVHRVLNSASSTFWDS*VSCESA
Trigger: GGCAGACTCACAGGAGACCAAGGAATCCCAGAAAGT...TGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCTCCAAGAGGGCCACCTaGAATGCCTTCAACCTGGAT +
Preference number: 5 (lower is better)
Translates to: FHDPFPKGPPSPELSFITSKRAT*NAFNLD
Trigger: ATCCAGGTTGAAGGCATTCAAGGTGGCCCTCTTGGA...GGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCGACAATCAGCCGGTATaGGTTGTCACTGATCAGCTC +
Preference number: 5 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLDNQPV*VVTDQL
Trigger: GAGCTGATCAGTGACAACCAATACCGGCTGATTGTC...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS TCA 90 bp GTGGGGATAGCTCGGGGTGCAGTGCAAAGCACATACCGCAGAAGCTaGGACTTGGCAACGGATGGGTCTCCTATTAGAAGAATATTGATG +
Preference number: 5 (lower is better)
Translates to: VGIARGAVQSTYRRS*DLATDGSPIRRILM
Trigger: CATCAATATTCTTCTAATAGGAGACCCATCCGTTGCCAAGTCTCAGCTTCTGCGGTATGTGCTTTGCACTGCACCCCGAGCTATCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000476448.1
ENST00000596288.7
ENST00000616552.4
CDS TCA 90 bp CGAAGGACATGGTCTGAGATCTCCCGATCCTGCTCAGGATCCATCTaGTCCAGCATGATGAAGAGCAAGTCAAATCGTGACAGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: RRTWSEISRSCSGSI*SSMMKSKSNRDSSE
Trigger: CTCACTGCTGTCACGATTTGACTTGCTCTTCATCATGCTGGATCAGATGGATCCTGAGCAGGATCGGGAGATCTCAGACCATGTCCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS TCA 90 bp CCTGGATTCACTCAACTCCACTTTCTGGGATTCCTTGGTCTCCTGTaGGTCTGCCGTCTTTGGAGTGTGTACTTGAGGCATTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PGFTQLHFLGFLGLL*VCRLWSVYLRHFLL
Trigger: GAGGAGGAAATGCCTCAAGTACACACTCCAAAGACGGCAGACTCACAGGAGACCAAGGAATCCCAGAAAGTGGAGTTGAGTGAATCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS TCA 90 bp GTTAGTCAGCAAAACCAAATGAAGGTGAGGACAATGGTTGGGGCCTaGTTCCACTTACCCTGCCGTAGACAGGGTTGGCAGCTGCCAAAA +
Preference number: 5 (lower is better)
Translates to: VSQQNQMKVRTMVGA*FHLPCRRQGWQLPK
Trigger: TTTTGGCAGCTGCCAACCCTGTCTACGGCAGGGTAAGTGGAATCAGGCCCCAACCATTGTCCTCACCTTCATTTGGTTTTGCTGACTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476448.1
CDS GCA 90 bp CCATCTTTGGCATCTGGCTGGCGAGTCTTCCTTCTCTTCCTCTTCTaGTCCTGGTCCTCTTGGCTTTTCTCCTCTTCATCTTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: PSLASGWRVFLLFLF*SWSSWLFSSSSSVS
Trigger: AGAGACAGAAGATGAAGAGGAGAAAAGCCAAGAGGACCAGGAGCAGAAGAGGAAGAGAAGGAAGACTCGCCAGCCAGATGCCAAAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000421471.1
ENST00000596288.7
ENST00000616552.4
CDS CCA 90 bp GCCACCTTGAATGCCTTCAACCTGGATTCACTCAACTCCACTTTCTaGGATTCCTTGGTCTCCTGTGAGTCTGCCGTCTTTGGAGTGTGT +
Preference number: 5 (lower is better)
Translates to: ATLNAFNLDSLNSTF*DSLVSCESAVFGVC
Trigger: ACACACTCCAAAGACGGCAGACTCACAGGAGACCAAGGAATCCCAGAAAGTGGAGTTGAGTGAATCCAGGTTGAAGGCATTCAAGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS CCA 90 bp CAACATGGTGAGATCCCGTCTCTGGATTCACTCAACTCCACTTTCTaGGATTCCTTGGTCTCCTGTGAGTCTGCCGTCTTTGGAGTGTGT +
Preference number: 5 (lower is better)
Translates to: QHGEIPSLDSLNSTF*DSLVSCESAVFGVC
Trigger: ACACACTCCAAAGACGGCAGACTCACAGGAGACCAAGGAATCCCAGAAAGTGGAGTTGAGTGAATCCAGAGACGGGATCTCACCATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421471.1
CDS-3UTR CAA 90 bp ACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCAACATTCACACTGCGGACGACTTaGGGACGAACTAGAGAACAT +
Preference number: 5 (lower is better)
Translates to: THSQRVHRVLNSASSPTFTLRTT*GRTREH
Trigger: ATGTTCTCTAGTTCGTCCCAAAGTCGTCCGCAGTGT...GAATGTTGGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTCATGCCCATGGATACTaGGGGCCAATGACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPHAHGY*GPMTWP
Trigger: TGGCCAAGTCATTGGCCCCAAGTATCCATGGGCATG...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCACCTATTAGAAGAATATaGATGTCCCCACGGATGTGG +
Preference number: 5 (lower is better)
Translates to: LGSGRGWETQNKLSRHNPPIRRI*MSPRMW
Trigger: CCACATCCGTGGGGACATCAATATTCTTCTAATAGG...TGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp GGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCACAGGCTTGATGATTTaGGCCACATGGATGTACTTC +
Preference number: 5 (lower is better)
Translates to: GSFHDPFPKGPPSPELSFTGLMI*ATWMYF
Trigger: GAAGTACATCCATGTGGCCAAAATCATCAAGCCTGT...GAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp GAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAAGTGCTTATGAATCCCCATCTTaGGCATCTGGCTGGCGAGTC +
Preference number: 5 (lower is better)
Translates to: ELLSTNWNHPKPSLDQSAYESPS*ASGWRV
Trigger: GACTCGCCAGCCAGATGCCAAAGATGGGGATTCATA...AGCACTTTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCCTTTGGAGTGTGTACTaGAGGCATTTCCTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLLWSVY*RHFLLC
Trigger: ACAGAGGAGGAAATGCCTCAAGTACACACTCCAAAG...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGCTTTGGAGTGTGTACTaGAGGCATTTCCTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: HCLLFPHPMAAFMTHSQRLWSVY*RHFLLC
Trigger: ACAGAGGAGGAAATGCCTCAAGTACACACTCCAAAG...CCTTTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS TCA 90 bp TCTGGATTCACTCAACTCCACTTTCTGGGATTCCTTGGTCTCCTGTaGGTCTGCCGTCTTTGGAGTGTGTACTTGAGGCATTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SGFTQLHFLGFLGLL*VCRLWSVYLRHFLL
Trigger: GAGGAGGAAATGCCTCAAGTACACACTCCAAAGACGGCAGACTCACAGGAGACCAAGGAATCCCAGAAAGTGGAGTTGAGTGAATCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421471.1
CDS CCA 90 bp TTGGCATCTGGCTGGCGAGTCTTCCTTCTCTTCCTCTTCTGCTCCTaGTCCTCTTGGCTTTTCTCCTCTTCATCTTCTGTCTCTGATTCA +
Preference number: 5 (lower is better)
Translates to: LASGWRVFLLFLFCS*SSWLFSSSSSVSDS
Trigger: TGAATCAGAGACAGAAGATGAAGAGGAGAAAAGCCAAGAGGACCAGGAGCAGAAGAGGAAGAGAAGGAAGACTCGCCAGCCAGATGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000421471.1
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp GCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAATCTGTCTCAAGGGGATaGTTCTCCTCATCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: ASELLSTNWNHPKPSLDQSVSRG*FSSSLV
Trigger: TACCAAGGATGAGGAGAACAATCCCCTTGAGACAGA...TTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp AAGAAAGCTTTCTTGACCTGCATGACGTGCCTCAGAGCTTCTCTCCACCAATTGTCTTCCTGGCTAAAGTaGGGATCATCTGTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: KKAFLTCMTCLRASLHQLSSWLK*GSSVAR
Trigger: CCTGGCCACAGATGATCCCAACTTTAGCCAGGAAGA...CAATTGGTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAAGAAAGCTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp ACTTGGGTCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCTATTTACAATTGGGTTaGTGTGGGATGGGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: TWVRERVGNTEQTLSAQPYLQLG*CGMGSR
Trigger: CCTACTTCCCATCCCACACAAACCCAATTGTAAATA...GGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGACCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTAGCTCCTCAAAGGCATaGTTCAGAAGCCGGTTAGCC +
Preference number: 5 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPSSSKA*FRSRLA
Trigger: GGCTAACCGGCTTCTGAACAATGCCTTTGAGGAGCT...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS CCA 90 bp GTGGCCGACTCCTGTGTCAGGACAGGCTTGATGATTTTGGCCACATaGATGTACTTCTTCATGAATGCTGCACTCACCATCTTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: VADSCVRTGLMILAT*MYFFMNAALTIFSF
Trigger: AAAGGAGAAGATGGTGAGTGCAGCATTCATGAAGAAGTACATCCATGTGGCCAAAATCATCAAGCCTGTCCTGACACAGGAGTCGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000421471.1
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp GGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAGAGACGAGGCCTCTGGTCAAAGATATCCTaGGATCGGGTTTTACTGAAC +
Preference number: 5 (lower is better)
Translates to: GKHRTNSLGTTQVQRRGLWSKIS*DRVLLN
Trigger: GTTCAGTAAAACCCGATCCAAGGATATCTTTGACCA...GAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCACAGGCTTGATGATTTaGGCCACATGGATGTACTTC +
Preference number: 5 (lower is better)
Translates to: FHDPFPKGPPSPELSFITTGLMI*ATWMYF
Trigger: GAAGTACATCCATGTGGCCAAAATCATCAAGCCTGT...GGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCTTGTCATCCTGCATCTaGCTCAGAGCAGCCTGGATC +
Preference number: 5 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLLSSCI*LRAAWI
Trigger: GATCCAGGCTGCTCTGAGCAAGATGCAGGATGACAA...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCATGGTCAAAGATATCCTaGGATCGGGTTTTACTGAAC +
Preference number: 5 (lower is better)
Translates to: SGRGWETQNKLSRHNPSSWSKIS*DRVLLN
Trigger: GTTCAGTAAAACCCGATCCAAGGATATCTTTGACCA...TGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp GCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCATGGTCAAAGATATCCTaGGATCGGGTTTTACTGAAC +
Preference number: 5 (lower is better)
Translates to: AFMTHSQRVHRVLNSASSWSKIS*DRVLLN
Trigger: GTTCAGTAAAACCCGATCCAAGGATATCTTTGACCA...TGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGACTGCTCCTGGTCCTCTaGGCTTTTCTCCTCTTCATC +
Preference number: 5 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGLLLVL*AFLLFI
Trigger: GATGAAGAGGAGAAAAGCCAAGAGGACCAGGAGCAG...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGATATGAATCCCCATCTTaGGCATCTGGCTGGCGAGTC +
Preference number: 5 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGYESPS*ASGWRV
Trigger: GACTCGCCAGCCAGATGCCAAAGATGGGGATTCATA...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TCAGGGAGAGGGTGGGAAACACAGAACAAACTCTCTCGGCACAACCCAAGTTCAATTCCTCGCCTTCAGTaGAATTCAACACTGTTAAGG +
Preference number: 5 (lower is better)
Translates to: SGRGWETQNKLSRHNPSSIPRLQ*NSTLLR
Trigger: CCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAAT...TGAACTTGGGTTGTGCCGAGAGAGTTTGTTCTGTGTTTCCCACCCTCTCCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS TCA 90 bp GATTGCTTTCTTGACATAGTCATGCCCATGGATACTTGGGGCCAATaGCTTGGCCAGCTGGTCAAAGATATCCTTGGATCGGGTTTTACT +
Preference number: 5 (lower is better)
Translates to: DCFLDIVMPMDTWGQ*LGQLVKDILGSGFT
Trigger: AGTAAAACCCGATCCAAGGATATCTTTGACCAGCTGGCCAAGTCATTGGCCCCAAGTATCCATGGGCATGACTATGTCAAGAAAGCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000476448.1
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGACCTGCATGACGTGCCTCCTATTAGAAGAATATaGATGTCCCCACGGATGTGG +
Preference number: 5 (lower is better)
Translates to: HLNWCYCKESFLDLHDVPPIRRI*MSPRMW
Trigger: CCACATCCGTGGGGACATCAATATTCTTCTAATAGG...AGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGAGACAATCAGCCGGTATaGGTTGTCACTGATCAGCTC +
Preference number: 5 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGDNQPV*VVTDQL
Trigger: GAGCTGATCAGTGACAACCAATACCGGCTGATTGTC...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCCTGAACTTCTTGATCTaGGCTATATCCTCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLLNFLI*AISSAE
Trigger: CTCTGCTGAGGATATAGCCAAGATCAAGAAGTTCAG...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp GCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCAGTTTTACTGAACTTCTaGATCTTGGCTATATCCTCA +
Preference number: 5 (lower is better)
Translates to: AFMTHSQRVHRVLNSASSVLLNF*ILAISS
Trigger: TGAGGATATAGCCAAGATCAAGAAGTTCAGTAAAAC...TGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCGCATGGATGCCAGCCTaGGCAATGGTCACTCGACCC +
Preference number: 5 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFAWMPA*AMVTRP
Trigger: GGGTCGAGTGACCATTGCCAAGGCTGGCATCCATGC...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAGGTCCACAGTCTaGCTCATGCGGGCCTTCGCA +
Preference number: 5 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYCRSTV*LMRAFA
Trigger: TGCGAAGGCCCGCATGAGCAAGACTGTGGACCTGCA...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAGCTTCATCACCATATGTTATTTACAATaGGGTTTGTGTGGGATGGGA +
Preference number: 5 (lower is better)
Translates to: FHDPFPKGPPSPELSFITICYLQ*GLCGMG
Trigger: TCCCATCCCACACAAACCCAATTGTAAATAACATAT...GGTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATTTGTCATCCTGCATCTaGCTCAGAGCAGCCTGGATC +
Preference number: 5 (lower is better)
Translates to: PPKVLRSHMLFTIGFVWDLSSCI*LRAAWI
Trigger: GATCCAGGCTGCTCTGAGCAAGATGCAGGATGACAA...ATCCCACACAAACCCAATTGTAAATAACATATGACTTCTGAGTACTTTTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp AGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCTATTTACAATTGGGTTaGTGTGGGATGGGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: SQCFCNEDAIVIVLSHCLYLQLG*CGMGSR
Trigger: CCTACTTCCCATCCCACACAAACCCAATTGTAAATA...GAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATAGCTCCTCAAAGGCATaGTTCAGAAGCCGGTTAGCC +
Preference number: 5 (lower is better)
Translates to: PPKVLRSHMLFTIGFVWDSSSKA*FRSRLA
Trigger: GGCTAACCGGCTTCTGAACAATGCCTTTGAGGAGCT...ATCCCACACAAACCCAATTGTAAATAACATATGACTTCTGAGTACTTTTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CAGCTTCATCACCAACATTCCTCGCCTTCAGTTGAATTCAACACTGTTAAGGGATATTTACAATTGGGTTaGTGTGGGATGGGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: QLHHQHSSPSVEFNTVKGYLQLG*CGMGSR
Trigger: CCTACTTCCCATCCCACACAAACCCAATTGTAAATA...TCCCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAATGTTGGTGATGAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTCTTCCTGGCTAAAGTaGGGATCATCTGTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: CFVIQYIFTLTGATAKKASSWLK*GSSVAR
Trigger: CCTGGCCACAGATGATCCCAACTTTAGCCAGGAAGA...AGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCGTGAGTCTGCCGTCTTaGGAGTGTGTACTTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESVSLPS*ECVLEA
Trigger: TGCCTCAAGTACACACTCCAAAGACGGCAGACTCAC...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCGTGAGTCTGCCGTCTTaGGAGTGTGTACTTGAGGCA +
Preference number: 5 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCVSLPS*ECVLEA
Trigger: TGCCTCAAGTACACACTCCAAAGACGGCAGACTCAC...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCGTGAGTCTGCCGTCTTaGGAGTGTGTACTTGAGGCA +
Preference number: 5 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFVSLPS*ECVLEA
Trigger: TGCCTCAAGTACACACTCCAAAGACGGCAGACTCAC...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCACTTTCTGGGATTCCTaGGTCTCCTGTGAGTCTGCC +
Preference number: 5 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCTFWDS*VSCESA
Trigger: GGCAGACTCACAGGAGACCAAGGAATCCCAGAAAGT...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTCCAAGAGGGCCACCTaGAATGCCTTCAACCTGGAT +
Preference number: 5 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCSKRAT*NAFNLD
Trigger: ATCCAGGTTGAAGGCATTCAAGGTGGCCCTCTTGGA...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTCCAAGAGGGCCACCTaGAATGCCTTCAACCTGGAT +
Preference number: 5 (lower is better)
Translates to: CFVIQYIFTLTGATAKKASKRAT*NAFNLD
Trigger: ATCCAGGTTGAAGGCATTCAAGGTGGCCCTCTTGGA...AGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCTTGTCATCCTGCATCTaGCTCAGAGCAGCCTGGATC +
Preference number: 5 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFLSSCI*LRAAWI
Trigger: GATCCAGGCTGCTCTGAGCAAGATGCAGGATGACAA...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCATCAGCCGGTATTGGTaGTCACTGATCAGCTCCCGA +
Preference number: 5 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFISRYW*SLISSR
Trigger: TCGGGAGCTGATCAGTGACAACCAATACCGGCTGAT...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCGAAGAGGCGGGGACCTaGGGAGCATATAAGCATTAT +
Preference number: 5 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCEEAGT*GAYKHY
Trigger: ATAATGCTTATATGCTCCCAAGGTCCCCGCCTCTTC...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229854.12
ENST00000616552.4
CDS-3UTR CAA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCGCAAAGAAAGCTTTCTaGACCTGCATGACGTGCCTC +
Preference number: 5 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESAKKAF*TCMTCL
Trigger: GAGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGC...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCGCAAAGAAAGCTTTCTaGACCTGCATGACGTGCCTC +
Preference number: 5 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFAKKAF*TCMTCL
Trigger: GAGGCACGTCATGCAGGTCAAGAAAGCTTTCTTTGC...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACCGCAGGTCATTCACATaGACAATCAGCCGGTATTGG +
Preference number: 5 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYRRSFT*TISRYW
Trigger: CCAATACCGGCTGATTGTCAATGTGAATGACCTGCG...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTCTGTCTCAAGGGGATaGTTCTCCTCATCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: CFVIQYIFTLTGATAKKASVSRG*FSSSLV
Trigger: TACCAAGGATGAGGAGAACAATCCCCTTGAGACAGA...AGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCCTTTGGAGTGTGTACTaGAGGCATTTCCTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFLWSVY*RHFLLC
Trigger: ACAGAGGAGGAAATGCCTCAAGTACACACTCCAAAG...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATATTCCTCGCCTTCAGTaGAATTCAACACTGTTAAGG +
Preference number: 5 (lower is better)
Translates to: PPKVLRSHMLFTIGFVWDIPRLQ*NSTLLR
Trigger: CCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAAT...ATCCCACACAAACCCAATTGTAAATAACATATGACTTCTGAGTACTTTTGGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACCTGAACTTCTTGATCTaGGCTATATCCTCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYLNFLI*AISSAE
Trigger: CTCTGCTGAGGATATAGCCAAGATCAAGAAGTTCAG...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCCTGAACTTCTTGATCTaGGCTATATCCTCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCLNFLI*AISSAE
Trigger: CTCTGCTGAGGATATAGCCAAGATCAAGAAGTTCAG...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACCCTATTAGAAGAATATaGATGTCCCCACGGATGTGG +
Preference number: 5 (lower is better)
Translates to: WILGLFCDTIHIHLNWCYPIRRI*MSPRMW
Trigger: CCACATCCGTGGGGACATCAATATTCTTCTAATAGG...GTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCACAGGCTTGATGATTTaGGCCACATGGATGTACTTC +
Preference number: 5 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESTGLMI*ATWMYF
Trigger: GAAGTACATCCATGTGGCCAAAATCATCAAGCCTGT...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTATTCCTCGCCTTCAGTaGAATTCAACACTGTTAAGG +
Preference number: 5 (lower is better)
Translates to: CFVIQYIFTLTGATAKKAIPRLQ*NSTLLR
Trigger: CCTTAACAGTGTTGAATTCAACTGAAGGCGAGGAAT...AGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp CCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATATATGTTATTTACAATaGGGTTTGTGTGGGATGGGA +
Preference number: 5 (lower is better)
Translates to: PPKVLRSHMLFTIGFVWDICYLQ*GLCGMG
Trigger: TCCCATCCCACACAAACCCAATTGTAAATAACATAT...ATCCCACACAAACCCAATTGTAAATAACATATGACTTCTGAGTACTTTTGGGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCTTTCGTTTTACTGAACTTCTaGATCTTGGCTATATCCTCA +
Preference number: 5 (lower is better)
Translates to: FVIQYIFTLTGATAKKAFVLLNF*ILAISS
Trigger: TGAGGATATAGCCAAGATCAAGAAGTTCAGTAAAAC...GAAAGCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp TTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCTACTGCAAAGAAAGCGTTTTACTGAACTTCTaGATCTTGGCTATATCCTCA +
Preference number: 5 (lower is better)
Translates to: LFCDTIHIHLNWCYCKESVLLNF*ILAISS
Trigger: TGAGGATATAGCCAAGATCAAGAAGTTCAGTAAAAC...GCTTTCTTTGCAGTAGCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS-3UTR CAA 90 bp ATCTGGATATTGGGTTTGTTTTGTGATACAATACATATTCACCTTAACTGGTGCATATGTTATTTACAATaGGGTTTGTGTGGGATGGGA +
Preference number: 5 (lower is better)
Translates to: IWILGLFCDTIHIHLNWCICYLQ*GLCGMG
Trigger: TCCCATCCCACACAAACCCAATTGTAAATAACATAT...GCACCAGTTAAGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000596288.7
ENST00000616552.4
CDS CCA 72 bp CAGAATGACGTCCACAGAGCGGGGGAGCTGGCCGGCTaGGGCCTTCTCCGGCATCTCCTGGATGGTGATGGT +
Preference number: 6 (lower is better)
Translates to: QNDVHRAGELAG*GLLRHLLDGDG
Trigger: ACCATCACCATCCAGGAGATGCCGGAGAAGGCCCCAGCCGGCCAGCTCCCCCGCTCTGTGGACGTCATTCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS CCA 72 bp TCATCATCCAGAATGACGTCCACAGAGCGGGGGAGCTaGCCGGCTGGGGCCTTCTCCGGCATCTCCTGGATG +
Preference number: 6 (lower is better)
Translates to: SSSRMTSTERGS*PAGAFSGISWM
Trigger: CATCCAGGAGATGCCGGAGAAGGCCCCAGCCGGCCAGCTCCCCCGCTCTGTGGACGTCATTCTGGATGATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS GCA 72 bp CACATCGTCCAGCACCACGGTACCCGCCATGCCCGCTaGCAAAGAACTACCTCCACCAAAGTCGCGTGGAGG +
Preference number: 6 (lower is better)
Translates to: HIVQHHGTRHAR*QRTTSTKVAWR
Trigger: CCTCCACGCGACTTTGGTGGAGGTAGTTCTTTGGCAGCGGGCATGGCGGGTACCGTGGTGCTGGACGATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS GCA 72 bp GCAGCTCCACATCGTCCAGCACCACGGTACCCGCCATaGCCGCTGCCAAAGAACTACCTCCACCAAAGTCGC +
Preference number: 6 (lower is better)
Translates to: AAPHRPAPRYPP*PLPKNYLHQSR
Trigger: GCGACTTTGGTGGAGGTAGTTCTTTGGCAGCGGGCATGGCGGGTACCGTGGTGCTGGACGATGTGGAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS GCA 72 bp CCCTGCCGTAGACAGGGTTGGCAGCTGCCAAAACACTaGAGCGGGCATTCAGCCGAGCATGGATGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: PCRRQGWQLPKH*SGHSAEHGCQP
Trigger: AGGCTGGCATCCATGCTCGGCTGAATGCCCGCTGCAGTGTTTTGGCAGCTGCCAACCCTGTCTACGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476448.1
CDS CCA 72 bp GCTGCCAAAACACTGCAGCGGGCATTCAGCCGAGCATaGATGCCAGCCTTGGCAATGGTCACTCGACCCTGC +
Preference number: 6 (lower is better)
Translates to: AAKTLQRAFSRA*MPALAMVTRPC
Trigger: GCAGGGTCGAGTGACCATTGCCAAGGCTGGCATCCATGCTCGGCTGAATGCCCGCTGCAGTGTTTTGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000476448.1
ENST00000596288.7
ENST00000616552.4
CDS TCA 72 bp GGCCGGCTGGGGCCTTCTCCGGCATCTCCTGGATGGTaGTGGTCTGGTGATCCTTGTAGACAGAAAGGCCAT +
Preference number: 6 (lower is better)
Translates to: GRLGPSPASPGW*WSGDPCRQKGH
Trigger: ATGGCCTTTCTGTCTACAAGGATCACCAGACCATCACCATCCAGGAGATGCCGGAGAAGGCCCCAGCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS GCA 72 bp CCAAAACACTGCAGCGGGCATTCAGCCGAGCATGGATaGCAGCCTTGGCAATGGTCACTCGACCCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: PKHCSGHSAEHG*QPWQWSLDPAP
Trigger: TGGAGCAGGGTCGAGTGACCATTGCCAAGGCTGGCATCCATGCTCGGCTGAATGCCCGCTGCAGTGTTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000476448.1
ENST00000596288.7
ENST00000616552.4
CDS CCA 72 bp CCACAGTCTTGCTCATGCGGGCCTTCGCATGGGCTGTaGCCAGTCGAATCAGAGTTTCCAGTGTTCGGGCTG +
Preference number: 6 (lower is better)
Translates to: PQSCSCGPSHGL*PVESEFPVFGL
Trigger: CAGCCCGAACACTGGAAACTCTGATTCGACTGGCCACAGCCCATGCGAAGGCCCGCATGAGCAAGACTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000421471.1
ENST00000596288.7
ENST00000616552.4
CDS TCA 72 bp ACTACCTCCACCAAAGTCGCGTGGAGGTTCCCAGGATaGCTCCACCCCGGCGCGAAAACTTCCGAACTCTTC +
Preference number: 6 (lower is better)
Translates to: TTSTKVAWRFPG*LHPGAKTSELF
Trigger: GAAGAGTTCGGAAGTTTTCGCGCCGGGGTGGAGTCATCCTGGGAACCTCCACGCGACTTTGGTGGAGGTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000616552.4
CDS GCA 72 bp GCATACTGGACCAACTCCACAGCTTCCTCTGCATCCTaGAGGTCCACAGTCTTGCTCATGCGGGCCTTCGCA +
Preference number: 6 (lower is better)
Translates to: AYWTNSTASSAS*RSTVLLMRAFA
Trigger: TGCGAAGGCCCGCATGAGCAAGACTGTGGACCTGCAGGATGCAGAGGAAGCTGTGGAGTTGGTCCAGTATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000421471.1
ENST00000596288.7
ENST00000616552.4
CDS GCA 72 bp GATTCCACTTACCCTGCCGTAGACAGGGTTGGCAGCTaGCAAAACACTGCAGCGGGCATTCAGCCGAGCATG +
Preference number: 6 (lower is better)
Translates to: DSTYPAVDRVGS*QNTAAGIQPSM
Trigger: CATGCTCGGCTGAATGCCCGCTGCAGTGTTTTGGCAGCTGCCAACCCTGTCTACGGCAGGGTAAGTGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476448.1
CDS CCA 72 bp GGGCATTCAGCCGAGCATGGATGCCAGCCTTGGCAATaGTCACTCGACCCTGCTCCATCACTTCATGGATGG +
Preference number: 6 (lower is better)
Translates to: GHSAEHGCQPWQ*SLDPAPSLHGW
Trigger: CCATCCATGAAGTGATGGAGCAGGGTCGAGTGACCATTGCCAAGGCTGGCATCCATGCTCGGCTGAATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000476448.1
ENST00000596288.7
ENST00000616552.4
CDS CCA 72 bp TGCAGCGGGCATTCAGCCGAGCATGGATGCCAGCCTTaGCAATGGTCACTCGACCCTGCTCCATCACTTCAT +
Preference number: 6 (lower is better)
Translates to: CSGHSAEHGCQP*QWSLDPAPSLH
Trigger: ATGAAGTGATGGAGCAGGGTCGAGTGACCATTGCCAAGGCTGGCATCCATGCTCGGCTGAATGCCCGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000476448.1
ENST00000596288.7
ENST00000616552.4
CDS CCA 72 bp TGCAGGTCCACAGTCTTGCTCATGCGGGCCTTCGCATaGGCTGTGGCCAGTCGAATCAGAGTTTCCAGTGTT +
Preference number: 6 (lower is better)
Translates to: CRSTVLLMRAFA*AVASRIRVSSV
Trigger: AACACTGGAAACTCTGATTCGACTGGCCACAGCCCATGCGAAGGCCCGCATGAGCAAGACTGTGGACCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000421471.1
ENST00000596288.7
ENST00000616552.4
CDS TCA 72 bp GATTCTGTGAGGCGATTCATGCCGATTGACTGCGCATaGGCTTCCCGGAACACATCCAAGAGGGCCACCTTG +
Preference number: 6 (lower is better)
Translates to: DSVRRFMPIDCA*ASRNTSKRATL
Trigger: CAAGGTGGCCCTCTTGGATGTGTTCCGGGAAGCTCATGCGCAGTCAATCGGCATGAATCGCCTCACAGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000421471.1
ENST00000596288.7
ENST00000616552.4
CDS CCA 72 bp GAGTCTTATACTGGTCATACCTGCCGTAGACAGGGTTaGCAGCTGCCAAAACACTGCAGCGGGCATTCAGCC +
Preference number: 6 (lower is better)
Translates to: ESYTGHTCRRQG*QLPKHCSGHSA
Trigger: GGCTGAATGCCCGCTGCAGTGTTTTGGCAGCTGCCAACCCTGTCTACGGCAGGTATGACCAGTATAAGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS TCA 72 bp GCTCGGGGTGCAGTGCAAAGCACATACCGCAGAAGCTaGGACTTGGCAACGGATGGGTCTCCTATTAGAAGA +
Preference number: 6 (lower is better)
Translates to: ARGAVQSTYRRS*DLATDGSPIRR
Trigger: TCTTCTAATAGGAGACCCATCCGTTGCCAAGTCTCAGCTTCTGCGGTATGTGCTTTGCACTGCACCCCGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000476448.1
ENST00000596288.7
ENST00000616552.4
CDS TCA 72 bp AGGTGCTCTGTAACGGTGCATCCGAAGGACATGGTCTaGGATCTCCCGATCCTGCTCAGGATCCATCTGATC +
Preference number: 6 (lower is better)
Translates to: RCSVTVHPKDMV*DLPILLRIHLI
Trigger: GATCAGATGGATCCTGAGCAGGATCGGGAGATCTCAGACCATGTCCTTCGGATGCACCGTTACAGAGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS TCA 72 bp CCGGTTGATGGATTCTGTGAGGCGATTCATGCCGATTaGCTGCGCATGAGCTTCCCGGAACACATCCAAGAG +
Preference number: 6 (lower is better)
Translates to: PVDGFCEAIHAD*LRMSFPEHIQE
Trigger: CTCTTGGATGTGTTCCGGGAAGCTCATGCGCAGTCAATCGGCATGAATCGCCTCACAGAATCCATCAACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000421471.1
ENST00000596288.7
ENST00000616552.4
CDS CAA 90 bp ACTCTTCCCGCCACCAAAGGTTACCTCGAGGAAGAGGCGGGGACCTaGGGAGCATATAAGCATTATGATTGGCTGAGTTCTCTGAGGTCG +
Preference number: 6 (lower is better)
Translates to: TLPATKGYLEEEAGT*GAYKHYDWLSSLRS
Trigger: CGACCTCAGAGAACTCAGCCAATCATAATGCTTATATGCTCCCAAGGTCCCCGCCTCTTCCTCGAGGTAACCTTTGGTGGCGGGAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000616552.4
CDS TCA 72 bp CCACCCCTCCCAAGAGCAAGCAGAGGATTGCTTTCTTaGCATAGTCATGCCCATGGATACTTGGGGCCAATG +
Preference number: 6 (lower is better)
Translates to: PPLPRASRGLLS*HSHAHGYLGPM
Trigger: CATTGGCCCCAAGTATCCATGGGCATGACTATGTCAAGAAAGCAATCCTCTGCTTGCTCTTGGGAGGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000476448.1
ENST00000596288.7
ENST00000616552.4
CDS TCA 72 bp CAGATGAGGAAGATGATGCCCTCAGACACCATGACCTaGTTGTCATCCTGCATCTTGCTCAGAGCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: QMRKMMPSDTMT*LSSCILLRAAW
Trigger: CCAGGCTGCTCTGAGCAAGATGCAGGATGACAATCAGGTCATGGTGTCTGAGGGCATCATCTTCCTCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS CAA 90 bp AGCCGGTTAGCCCTCTTCTCGTTTTTCCTGCGCAGGTCATTCACATaGACAATCAGCCGGTATTGGTTGTCACTGATCAGCTCCCGAACT +
Preference number: 6 (lower is better)
Translates to: SRLALFSFFLRRSFT*TISRYWLSLISSRT
Trigger: AGTTCGGGAGCTGATCAGTGACAACCAATACCGGCTGATTGTCAATGTGAATGACCTGCGCAGGAAAAACGAGAAGAGGGCTAACCGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS TCA 72 bp TTCCTCCTCTGTGTCACTGAAGTCATAGGGGTCGTATaGATCCCCATCTTTGGCATCTGGCTGGCGAGTCTT +
Preference number: 6 (lower is better)
Translates to: FLLCVTEVIGVV*IPIFGIWLASL
Trigger: AAGACTCGCCAGCCAGATGCCAAAGATGGGGATTCATACGACCCCTATGACTTCAGTGACACAGAGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000421471.1
ENST00000596288.7
ENST00000616552.4
CDS TCA 72 bp CATGAGCTTCCCGGAACACATCCAAGAGGGCCACCTTaGATGCCTTCAACCTGGATTCACTCAACTCCACTT +
Preference number: 6 (lower is better)
Translates to: HELPGTHPRGPP*MPSTWIHSTPL
Trigger: AAGTGGAGTTGAGTGAATCCAGGTTGAAGGCATTCAAGGTGGCCCTCTTGGATGTGTTCCGGGAAGCTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS TCA 72 bp CATGAGCTTCCCGGAACACATCCAAGAGGGCCACCTTaGATGCCTTCAACCATGGAAACCCTGCAGTCATTA +
Preference number: 6 (lower is better)
Translates to: HELPGTHPRGPP*MPSTMETLQSL
Trigger: TAATGACTGCAGGGTTTCCATGGTTGAAGGCATTCAAGGTGGCCCTCTTGGATGTGTTCCGGGAAGCTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421471.1
CDS CCA 72 bp GCATCAATGGAGGCCACAAAATCCTTTAAGGCCCGCTaGAAGGCAACCAGCTCCTCAAAGGCATTGTTCAGA +
Preference number: 6 (lower is better)
Translates to: ASMEATKSFKAR*KATSSSKALFR
Trigger: TCTGAACAATGCCTTTGAGGAGCTGGTTGCCTTCCAGCGGGCCTTAAAGGATTTTGTGGCCTCCATTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS CCA 72 bp GAGATCCCGTCTCTGGATTCACTCAACTCCACTTTCTaGGATTCCTTGGTCTCCTGTGAGTCTGCCGTCTTT +
Preference number: 6 (lower is better)
Translates to: EIPSLDSLNSTF*DSLVSCESAVF
Trigger: AAAGACGGCAGACTCACAGGAGACCAAGGAATCCCAGAAAGTGGAGTTGAGTGAATCCAGAGACGGGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421471.1
CDS CAA 72 bp ATCTCAACTGAAGAGAAGGGCTCTTCGCTGTCCCGGTaGATGGATTCTGTGAGGCGATTCATGCCGATTGAC +
Preference number: 6 (lower is better)
Translates to: ISTEEKGSSLSR*MDSVRRFMPID
Trigger: GTCAATCGGCATGAATCGCCTCACAGAATCCATCAACCGGGACAGCGAAGAGCCCTTCTCTTCAGTTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000421471.1
ENST00000596288.7
ENST00000616552.4
CDS CAA 72 bp CCTGCGCAGGTCATTCACATTGACAATCAGCCGGTATaGGTTGTCACTGATCAGCTCCCGAACTTTGCTCTG +
Preference number: 6 (lower is better)
Translates to: PAQVIHIDNQPV*VVTDQLPNFAL
Trigger: CAGAGCAAAGTTCGGGAGCTGATCAGTGACAACCAATACCGGCTGATTGTCAATGTGAATGACCTGCGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS CCA 72 bp TGCCCATGGATACTTGGGGCCAATGACTTGGCCAGCTaGTCAAAGATATCCTTGGATCGGGTTTTACTGAAC +
Preference number: 6 (lower is better)
Translates to: CPWILGANDLAS*SKISLDRVLLN
Trigger: GTTCAGTAAAACCCGATCCAAGGATATCTTTGACCAGCTGGCCAAGTCATTGGCCCCAAGTATCCATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000476448.1
ENST00000596288.7
ENST00000616552.4
CDS CCA 72 bp CATAGTCATGCCCATGGATACTTGGGGCCAATGACTTaGCCAGCTGGTCAAAGATATCCTTGGATCGGGTTT +
Preference number: 6 (lower is better)
Translates to: HSHAHGYLGPMT*PAGQRYPWIGF
Trigger: AAACCCGATCCAAGGATATCTTTGACCAGCTGGCCAAGTCATTGGCCCCAAGTATCCATGGGCATGACTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000476448.1
ENST00000596288.7
ENST00000616552.4
CDS CAA 72 bp GTGGCCGACTCCTGTGTCAGGACAGGCTTGATGATTTaGGCCACATGGATGTACTTCTTCATGAATGCTGCA +
Preference number: 6 (lower is better)
Translates to: VADSCVRTGLMI*ATWMYFFMNAA
Trigger: TGCAGCATTCATGAAGAAGTACATCCATGTGGCCAAAATCATCAAGCCTGTCCTGACACAGGAGTCGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000421471.1
ENST00000596288.7
ENST00000616552.4
CDS CAA 72 bp AACCTGGATTCACTCAACTCCACTTTCTGGGATTCCTaGGTCTCCTGTGAGTCTGCCGTCTTTGGAGTGTGT +
Preference number: 6 (lower is better)
Translates to: NLDSLNSTFWDS*VSCESAVFGVC
Trigger: ACACACTCCAAAGACGGCAGACTCACAGGAGACCAAGGAATCCCAGAAAGTGGAGTTGAGTGAATCCAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS CAA 72 bp TCTCTGGATTCACTCAACTCCACTTTCTGGGATTCCTaGGTCTCCTGTGAGTCTGCCGTCTTTGGAGTGTGT +
Preference number: 6 (lower is better)
Translates to: SLDSLNSTFWDS*VSCESAVFGVC
Trigger: ACACACTCCAAAGACGGCAGACTCACAGGAGACCAAGGAATCCCAGAAAGTGGAGTTGAGTGAATCCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421471.1
CDS CAA 72 bp GCCCTCTTCTCGTTTTTCCTGCGCAGGTCATTCACATaGACAATCAGCCGGTATTGGTTGTCACTGATCAGC +
Preference number: 6 (lower is better)
Translates to: ALFSFFLRRSFT*TISRYWLSLIS
Trigger: GCTGATCAGTGACAACCAATACCGGCTGATTGTCAATGTGAATGACCTGCGCAGGAAAAACGAGAAGAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS CCA 72 bp AATGCCTTCAACCTGGATTCACTCAACTCCACTTTCTaGGATTCCTTGGTCTCCTGTGAGTCTGCCGTCTTT +
Preference number: 6 (lower is better)
Translates to: NAFNLDSLNSTF*DSLVSCESAVF
Trigger: AAAGACGGCAGACTCACAGGAGACCAAGGAATCCCAGAAAGTGGAGTTGAGTGAATCCAGGTTGAAGGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000596288.7
ENST00000616552.4
CDS CAA 90 bp CTCGTTTTTCCTGCGCAGGTCATTCACATTGACAATCAGCCGGTATaGGTTGTCACTGATCAGCTCCCGAACTTTGCTCTGATAAATTCC +
Preference number: 6 (lower is better)
Translates to: LVFPAQVIHIDNQPV*VVTDQLPNFALINS
Trigger: GGAATTTATCAGAGCAAAGTTCGGGAGCTGATCAGTGACAACCAATACCGGCTGATTGTCAATGTGAATGACCTGCGCAGGAAAAACGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000596288.7
ENST00000616552.4
CDS CAA 72 bp TCAAAGATATCCTTGGATCGGGTTTTACTGAACTTCTaGATCTTGGCTATATCCTCAGCAGAGAAAGAGGGC +
Preference number: 6 (lower is better)
Translates to: SKISLDRVLLNF*ILAISSAEKEG
Trigger: GCCCTCTTTCTCTGCTGAGGATATAGCCAAGATCAAGAAGTTCAGTAAAACCCGATCCAAGGATATCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229854.12
ENST00000419835.8
ENST00000476448.1
ENST00000596288.7
ENST00000616552.4
CDS GCA 72 bp AAGTTACTTTTAAATAAGGAACTTTCCAGGGGATTCTaGTGTGCAGGAATGGGTGAGGAACACTGCTCTAAA +
Preference number: 6 (lower is better)
Translates to: KLLLNKELSRGF*CAGMGEEHCSK
Trigger: TTTAGAGCAGTGTTCCTCACCCATTCCTGCACAGCAGAATCCCCTGGAAAGTTCCTTATTTAAAAGTAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476448.1