RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MBTPS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000140943

Ensembl transcript IDs: ENST00000343411.8, ENST00000561936.1, ENST00000562788.2, ENST00000562886.1, ENST00000562906.2, ENST00000563231.5, ENST00000564049.1, ENST00000564444.1, ENST00000564643.1, ENST00000565863.1, ENST00000567557.1, ENST00000568051.1, ENST00000569770.5, ENST00000569907.5, ENST00000570012.1, ENST00000570064.5

Found 482 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTaGCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCC +
Preference number: 1 (lower is better)
Translates to: PRQPFQFSRVFGAHS*RREVSLAAEPLSPS
Trigger: GGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR CCA 90 bp GCAGTCAGAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTaGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCC +
Preference number: 1 (lower is better)
Translates to: AVRRPQTAFPVLPSL*CAQLPAGSLTGGRA
Trigger: GGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTCTGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR GCA 90 bp GTCAGAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTaGGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACT +
Preference number: 1 (lower is better)
Translates to: VRRPQTAFPVLPSLW*AQLPAGSLTGGRAT
Trigger: AGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR TCA 90 bp TGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCTaGCGGGATCCACAGGAATCTTCTCGATGTACCAGGAGCCTCTGC +
Preference number: 1 (lower is better)
Translates to: CRREVSLAAEPLSPS*RDPQESSRCTRSLC
Trigger: GCAGAGGCTCCTGGTACATCGAGAAGATTCCTGTGGATCCCGTCAGGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR CCA 90 bp TTCTTCACCGACAATGGTGAAATCAAGACCTCAAATTACAAAACATaGTGGCAGGTGATACTTACAAAAATAAAGCGAAGGTCTATGTTT +
Preference number: 1 (lower is better)
Translates to: FFTDNGEIKTSNYKT*WQVILTKIKRRSMF
Trigger: AAACATAGACCTTCGCTTTATTTTTGTAAGTATCACCTGCCACCATGTTTTGTAATTTGAGGTCTTGATTTCACCATTGTCGGTGAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR-3UTR CCA 90 bp TGGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCGTGAAGGCTCTCTCTaGCCCTCACGGTCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: WCAQLPAGSLTGGRATKSREGSL*PSRSAR
Trigger: CCTGGCTGACCGTGAGGGCCAGAGAGAGCCTTCACG...GGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR CAA 90 bp TGCAGTCAGAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTaGGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: CSQKTPDSLSSSPES*VRTAAGGKSHWRQS
Trigger: GCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTCTGACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR-3UTR CCA 90 bp GCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCCCTGCAGCTGGAAACTaGATCCCTTTTAAACCAGCC +
Preference number: 2 (lower is better)
Translates to: AHSCRREVSLAAEPLSPSPAAGN*IPFKPA
Trigger: GGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGG...GGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR-3UTR TCA 90 bp GACATTAACAACTGTCGGCATTCCTCCATAGTAGATGGGCTGGGAGCAGTAGGGCTTGCTCAAACATGTTaGCCCCGGGGAGCCTCCGGG +
Preference number: 2 (lower is better)
Translates to: DINNCRHSSIVDGLGAVGLAQTC*PRGASG
Trigger: CCCGGAGGCTCCCCGGGGTCAACATGTTTGAGCAAG...CCCTACTGCTCCCAGCCCATCTACTATGGAGGAATGCCGACAGTTGTTAATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563231.5
3UTR-3UTR GCA 90 bp TCCTCCATAGTAGATGGGCTGGGAGCAGTAGGGCCACATGTAGGGACACTCAGTAGCTTGCCGTGGCCTTaGTCAAACATGTTGACCCCG +
Preference number: 2 (lower is better)
Translates to: SSIVDGLGAVGPHVGTLSSLPWP*SNMLTP
Trigger: CGGGGTCAACATGTTTGAGCAAGGCCACGGCAAGCT...ACTGAGTGTCCCTACATGTGGCCCTACTGCTCCCAGCCCATCTACTATGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563231.5
3UTR-3UTR GCA 90 bp GACATTAACAACTGTCGGCATTCCTCCATAGTAGATGGGCTGGGAGCAGTAGGGGACGCGATCAGGGCCTaGTTCATACTGGCGGGATTC +
Preference number: 2 (lower is better)
Translates to: DINNCRHSSIVDGLGAVGDAIRA*FILAGF
Trigger: GAATCCCGCCAGTATGAAGCAGGCCCTGATCGCGTC...CCCTACTGCTCCCAGCCCATCTACTATGGAGGAATGCCGACAGTTGTTAATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563231.5
3UTR-3UTR TCA 90 bp TGTGACTCCCATGCCGTTGAGGATGGTGACATTAACAACTGTCGGCATTCCTCCGGATCTGATAGGCTCTaGGCAGATCGAGCTTGCCGT +
Preference number: 2 (lower is better)
Translates to: CDSHAVEDGDINNCRHSSGSDRL*ADRACR
Trigger: ACGGCAAGCTCGATCTGCTCAGAGCCTATCAGATCC...GGAGGAATGCCGACAGTTGTTAATGTCACCATCCTCAACGGCATGGGAGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
3UTR-3UTR CCA 90 bp TCCATAGTAGATGGGCTGGGAGCAGTAGGGCCACATGTAGGGACACTCAGTCAGGCTCAAACTTGCCTGTaGCTTGTAGCTGTTGAGGAT +
Preference number: 2 (lower is better)
Translates to: SIVDGLGAVGPHVGTLSQAQTCL*LVAVED
Trigger: ATCCTCAACAGCTACAAGCCACAGGCAAGTTTGAGC...CTGACTGAGTGTCCCTACATGTGGCCCTACTGCTCCCAGCCCATCTACTATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
3UTR-3UTR CCA 90 bp TGTGACTCCCATGCCGTTGAGGATGGTGACATTAACAACTGTCGGCATTCCTCCAGATCGAGCTTGCCGTaGCCTTGCTCAAACATGTTG +
Preference number: 2 (lower is better)
Translates to: CDSHAVEDGDINNCRHSSRSSLP*PCSNML
Trigger: CAACATGTTTGAGCAAGGCCACGGCAAGCTCGATCT...GGAGGAATGCCGACAGTTGTTAATGTCACCATCCTCAACGGCATGGGAGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
3UTR TCA 72 bp GCCACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTaGAGGCTCTCTCTGGCCCTCACGGTCAGCCAGGCT +
Preference number: 3 (lower is better)
Translates to: ATTARLTHQRRP*RLSLALTVSQA
Trigger: AGCCTGGCTGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR TCA 72 bp GCAGATCGAGCTTGCCGTGGCCTTGCTCAAACATGTTaGCCCCGGGGAGCCTCCGGGCTGACGCGATCAGGG +
Preference number: 3 (lower is better)
Translates to: ADRACRGLAQTC*PRGASGLTRSG
Trigger: CCCTGATCGCGTCAGCCCGGAGGCTCCCCGGGGTCAACATGTTTGAGCAAGGCCACGGCAAGCTCGATCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563231.5
3UTR GCA 72 bp CCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTaGCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTA +
Preference number: 3 (lower is better)
Translates to: PFQFSRVFGAHS*RREVSLAAEPL
Trigger: TAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR CCA 72 bp AGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTaGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGGC +
Preference number: 3 (lower is better)
Translates to: RPQTAFPVLPSL*CAQLPAGSLTG
Trigger: GCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR TCA 72 bp TTGCTCAAACATGTTGACCCCGGGGAGCCTCCGGGCTaGCGCGATCAGGGCCTGCTTCATACTGGCGGGATT +
Preference number: 3 (lower is better)
Translates to: LLKHVDPGEPPG*RDQGLLHTGGI
Trigger: AATCCCGCCAGTATGAAGCAGGCCCTGATCGCGTCAGCCCGGAGGCTCCCCGGGGTCAACATGTTTGAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563231.5
3UTR TCA 72 bp GAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCTaGCGGGATCCACAGGAATCTTCTCGATGTACCAGG +
Preference number: 3 (lower is better)
Translates to: EVSLAAEPLSPS*RDPQESSRCTR
Trigger: CCTGGTACATCGAGAAGATTCCTGTGGATCCCGTCAGGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR-3UTR CAA 90 bp GCCGTTGAGGATGGTGACATTAACAACTGTCGGCATTCCTCCATAGTAGATGGGAGCTGGGGCTCAAACTaGCCTGTGGCTTGTAGCTGT +
Preference number: 3 (lower is better)
Translates to: AVEDGDINNCRHSSIVDGSWGSN*PVACSC
Trigger: ACAGCTACAAGCCACAGGCAAGTTTGAGCCCCAGCT...CCCATCTACTATGGAGGAATGCCGACAGTTGTTAATGTCACCATCCTCAACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR TCA 90 bp TTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCGGGGAGCCTCCGGGCTaGCGCGATCAGGGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LNQPPPQLGSPTSAVREGGEPPG*RDQGLL
Trigger: AAGCAGGCCCTGATCGCGTCAGCCCGGAGGCTCCCC...GCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TGGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCACCAGCGCCGTCCGTaGAGGCTCTCTCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: WCAQLPAGSLTGGRATKSHQRRP*RLSLAL
Trigger: GAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTG...GGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp TCCCTTTTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTAGCGAGGCCCACAGCTaGGAGCCTCAGCTCCGCCGA +
Preference number: 4 (lower is better)
Translates to: SLLNQPPPQLGSPTSAVRSEAHS*EPQLRR
Trigger: TCGGCGGAGCTGAGGCTCCCAGCTGTGGGCCTCGCT...ACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp CACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTCCGGGCCGCCGATGCTaGGGTTTAACACGTCGATCT +
Preference number: 4 (lower is better)
Translates to: HHSSAHPPAPSVKALSGPPGRRC*GLTRRS
Trigger: AGATCGACGTGTTAAACCTCAGCATCGGCGGCCCGG...AGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp TTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCCTGGAGAAGCAACACTaGTCCCTGAGAGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: LNQPPPQLGSPTSAVREGLEKQH*SLRGPG
Trigger: GCCGGGCCCTCTCAGGGACCAGTGTTGCTTCTCCAG...GCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp TTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCGTTCTCCCGAGTCTTTaGTGCGCACAGCTGCCGGCG +
Preference number: 4 (lower is better)
Translates to: LNQPPPQLGSPTSAVREGVLPSL*CAQLPA
Trigger: CGCCGGCAGCTGTGCGCACCAAAGACTCGGGAGAAC...GCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp CTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTCACGGTCAATCAATCAACCACTGTaGGCCAATCTGCGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: LGSPTSAVREGSLWPSRSINQPL*ANLRRR
Trigger: CCGGCGGCGCAGATTGGCTCACAGTGGTTGATTGAT...TGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TCCCTTTTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTTGGCGGTTCCCAGAGTaGCTGAGGCTAGGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: SLLNQPPPQLGSPTSAVRWRFPE*LRLGGV
Trigger: GACACCGCCTAGCCTCAGTCACTCTGGGAACCGCCA...ACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TCCCTTTTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGGGGTCTTTGGCGGGTaGACCTGCTGCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SLLNQPPPQLGSPTSAVRGVFGG*TCCMSC
Trigger: GCAGCTCATGCAGCAGGTTCACCCGCCAAAGACCCC...ACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCTGACGGGATCCACACAACCTGGCGCGGGATaGCTCTCAGCAGCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: AGSLTGGRATKSLLTGSTQPGAG*LSAAVC
Trigger: GCAGACGGCTGCTGAGAGCCATCCCGCGCCAGGTTG...TGTGGATCCCGTCAGGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCCACCGAAGGGGTCTTTaGCGGGTGAACCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: AHSCRREVSLAAEPLSPSHRRGL*RVNLLH
Trigger: ATGCAGCAGGTTCACCCGCCAAAGACCCCTTCGGTG...GGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR CAA 72 bp AGCAGATCGAGCTTGCCGTGGCCTTGCTCAAACATGTaGACCCCGGGGAGCCTCCGGGCTGACGCGATCAGG +
Preference number: 4 (lower is better)
Translates to: SRSSLPWPCSNM*TPGSLRADAIR
Trigger: CCTGATCGCGTCAGCCCGGAGGCTCCCCGGGGTCAACATGTTTGAGCAAGGCCACGGCAAGCTCGATCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR TCA 90 bp GCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCCCACTAAGTCCCTCCTaGCGGGATCCACAGGAATCT +
Preference number: 4 (lower is better)
Translates to: AHSCRREVSLAAEPLSPSPLSPS*RDPQES
Trigger: AGATTCCTGTGGATCCCGTCAGGAGGGACTTAGTGG...GGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp TTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCAGCCGTCTGCTCGAATaGCTTCCCGTAGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: LNQPPPQLGSPTSAVREGSRLLE*LPVACQ
Trigger: CTGGCATGCTACGGGAAGGCATTCGAGCAGACGGCT...GCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp TGGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCGTCCCTCCGGAGCTTaGCGATCTCTTCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: WCAQLPAGSLTGGRATKSRPSGA*RSLQGS
Trigger: ACTTCCCTGAAGAGATCGCCAAGCTCCGGAGGGACG...GGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp ACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTCACGGTCAGCCAGGCTGCCGCACGACGCCATCTTCTaGAAACTTCGCGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSAVREGSLWPSRSARLPHDAIF*KLRDAA
Trigger: TGCAGCATCGCGAAGTTTCCAGAAGATGGCGTCGTG...CGGCAGCCTGGCTGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp TGCAGTCAGAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCGCGGGCGCTTCACCCTaGGCTTCCTCCGCTTCGGCC +
Preference number: 4 (lower is better)
Translates to: CSQKTPDSLSSSPESLVRAGASP*ASSASA
Trigger: GGCCGAAGCGGAGGAAGCCCAGGGTGAAGCGCCCGC...GCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTCTGACTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp CACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTTGCTCACTAACAAGGTaGCAGCACCTGCAACCACTG +
Preference number: 4 (lower is better)
Translates to: HHSSAHPPAPSVKALSGPCSLTR*QHLQPL
Trigger: CAGTGGTTGCAGGTGCTGTCACCTTGTTAGTGAGCA...AGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp CACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTAGTACATCCTTCCCCTaGAGTCAGAAGACCCCAGAC +
Preference number: 4 (lower is better)
Translates to: HHSSAHPPAPSVKALSGPSTSFP*SQKTPD
Trigger: GTCTGGGGTCTTCTGACTGCAGGGGAAGGATGTACT...AGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR CAA 72 bp CTGATAGGCTCTGAGCAGATCGAGCTTGCCGTGGCCTaGCTCAAACATGTTGACCCCGGGGAGCCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: LIGSEQIELAVA*LKHVDPGEPPG
Trigger: GCCCGGAGGCTCCCCGGGGTCAACATGTTTGAGCAAGGCCACGGCAAGCTCGATCTGCTCAGAGCCTATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR TCA 90 bp TGGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCGCCAGCACCATAGGTaGCAATGTCAGGTTTCATGC +
Preference number: 4 (lower is better)
Translates to: WCAQLPAGSLTGGRATKSRQHHR*QCQVSC
Trigger: GCATGAAACCTGACATTGTCACCTATGGTGCTGGCG...GGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp AGTAGATGGGCTGGGAGCAGTAGGGCCACATGTAGGGACACTCAGTCAGATCTAGGGGAGCCTCCGGGCTaGCGCGATCAGGGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: SRWAGSSRATCRDTQSDLGEPPG*RDQGLL
Trigger: AAGCAGGCCCTGATCGCGTCAGCCCGGAGGCTCCCC...TAGATCTGACTGAGTGTCCCTACATGTGGCCCTACTGCTCCCAGCCCATCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR TCA 90 bp TGGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCGCGATGCTGCACCCTaGCGCATAATACATGTCATG +
Preference number: 4 (lower is better)
Translates to: WCAQLPAGSLTGGRATKSRDAAP*RIIHVM
Trigger: CATGACATGTATTATGCGTCAGGGTGCAGCATCGCG...GGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp CCGAGTCTTTGGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCCAGTCCTTCTGTCGGTaGCTGTCATCCAAGCAATTG +
Preference number: 4 (lower is better)
Translates to: PSLWCAQLPAGSLTGGRAQSFCR*LSSKQL
Trigger: CAATTGCTTGGATGACAGTCACCGACAGAAGGACTG...GGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCAAAGACTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp GCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCTGACGGGATCCACACTGCCAGAGCACATCTaGCTGCAGTGTCTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: AGSLTGGRATKSLLTGSTLPEHI*LQCLGN
Trigger: GTTGCCCAGACACTGCAGGCAGATGTGCTCTGGCAG...TGTGGATCCCGTCAGGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp CTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTCACGGTCAACCAGCTCACGCTTCTaGACTGTGCTCACTAACAAG +
Preference number: 4 (lower is better)
Translates to: LGSPTSAVREGSLWPSRSTSSRF*TVLTNK
Trigger: CTTGTTAGTGAGCACAGTCCAGAAGCGTGAGCTGGT...TGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCAGATCGAGCTTGCCGTaGCCTTGCTCAAACATGTTG +
Preference number: 4 (lower is better)
Translates to: AHSCRREVSLAAEPLSPSRSSLP*PCSNML
Trigger: CAACATGTTTGAGCAAGGCCACGGCAAGCTCGATCT...GGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR CAA 72 bp AAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTaGGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: KTPDSLSSSPES*VRTAAGGKSHW
Trigger: CCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TCCCTTTTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTTCAGGCCGTGACGACTaGGTCCTGTACTCCATTTGT +
Preference number: 4 (lower is better)
Translates to: SLLNQPPPQLGSPTSAVRSGRDD*VLYSIC
Trigger: ACAAATGGAGTACAGGACTCAGTCGTCACGGCCTGA...ACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp CCGAGTCTTTGGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCGAAGCAGCCAGATGTTaGCAAGCTTCATGGTCACAA +
Preference number: 4 (lower is better)
Translates to: PSLWCAQLPAGSLTGGRAEAARC*QASWSQ
Trigger: TTGTGACCATGAAGCTTGTCAACATCTGGCTGCTTC...GGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCAAAGACTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp TGGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCAATGTCAGGTTTCATaGGACCGTAGCCTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: WCAQLPAGSLTGGRATKSQCQVS*DRSLLV
Trigger: TACCAGGAGGCTACGGTCGCATGAAACCTGACATTG...GGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp TCCCTTTTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGCTGGGGCTCAAACTTaGCTGTGGCTTGTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SLLNQPPPQLGSPTSAVRAGAQT*LWLVAV
Trigger: AACAGCTACAAGCCACAGGCAAGTTTGAGCCCCAGC...ACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp GCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCCCACCATCAGCAAAGTaGCATACTGACTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: AHSCRREVSLAAEPLSPSPPSAK*HTDWHQ
Trigger: TTGATGCCAGTCAGTATGGCACTTTGCTGATGGTGG...GGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp GAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTGCTTTGGTGCGCACAGCTaGCGGCGGGAAGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: EDPRQPFQFSRVFGAHSCFGAHS*RREVSL
Trigger: CAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCAAA...GCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp ACTAAGTCCCTCCTGACGGGATCCACAGGAATCTTCTCGATGTACCAGGAGCCTCGCGGCGAACACGCCTaGGCACTCCATTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TKSLLTGSTGIFSMYQEPRGEHA*ALHSGL
Trigger: CAGCCCCGAATGGAGTGCCCAGGCGTGTTCGCCGCG...AGGCTCCTGGTACATCGAGAAGATTCCTGTGGATCCCGTCAGGAGGGACTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCTCAGATCTATGTAGCTaGGGCTCAAACTTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: AHSCRREVSLAAEPLSPSSDLCS*GSNLPV
Trigger: CACAGGCAAGTTTGAGCCCCAGCTACATAGATCTGA...GGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp TCCCTTTTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTCAGCTCATTCAGAGCTaGGATGTTAGCTCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: SLLNQPPPQLGSPTSAVRQLIQS*DVSSSG
Trigger: ACCGGAGGAGCTAACATCCCAGCTCTGAATGAGCTG...ACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp TTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCGCCTCCACCCTCAGCTaGAATCTGATAAAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: LNQPPPQLGSPTSAVREGASTLS*NLIKSQ
Trigger: TTGGGACTTTATCAGATTCCAGCTGAGGGTGGAGGC...GCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp ACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTCACGGTCAGCCAGGCTGCCGGATTCGATCGAAAGTTaGGTAACACCACCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: TSAVREGSLWPSRSARLPDSIES*VTPPCP
Trigger: TGGACAAGGTGGTGTTACCCAACTTTCGATCGAATC...CGGCAGCCTGGCTGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp CTGCAGTCAGAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCGTGAAGGCTCTCTCTaGCCCTCACGGTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LQSEDPRQPFQFSRVFGAREGSL*PSRSAR
Trigger: CCTGGCTGACCGTGAGGGCCAGAGAGAGCCTTCACG...CGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTCTGACTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp GAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTGCCTCTCACTCAGGCCGTaGCGACTGAGTCCTGTACTC +
Preference number: 4 (lower is better)
Translates to: EDPRQPFQFSRVFGAHSCLSLRP*RLSPVL
Trigger: GAGTACAGGACTCAGTCGTCACGGCCTGAGTGAGAG...GCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TCCATAGTAGATGGGCTGGGAGCAGTAGGGCCACATGTAGGGACACTCAGTCAGCTTGCTCAAACATGTTaGCCCCGGGGAGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SIVDGLGAVGPHVGTLSQLAQTC*PRGASG
Trigger: CCCGGAGGCTCCCCGGGGTCAACATGTTTGAGCAAG...CTGACTGAGTGTCCCTACATGTGGCCCTACTGCTCCCAGCCCATCTACTATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR GCA 90 bp TCTGAGCAGATCGAGCTTGCCGTGGCCTTGCTCAAACATGTTGACCCCGGGGAGGACGCGATCAGGGCCTaGTTCATACTGGCGGGATTC +
Preference number: 4 (lower is better)
Translates to: SEQIELAVALLKHVDPGEDAIRA*FILAGF
Trigger: GAATCCCGCCAGTATGAAGCAGGCCCTGATCGCGTC...CTCCCCGGGGTCAACATGTTTGAGCAAGGCCACGGCAAGCTCGATCTGCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR GCA 90 bp AGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTGCCGAGCTTGCCGTGGCCTTaGTCAAACATGTTGACCCCG +
Preference number: 4 (lower is better)
Translates to: RPQTAFPVLPSLWCAQLPSLPWP*SNMLTP
Trigger: CGGGGTCAACATGTTTGAGCAAGGCCACGGCAAGCT...CGGCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp CTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCGGCTCAGCCACGAATGTGCCATaGCCCAACCCATCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQLETGSLLNQPPPQLGSATNVP*PNPSSS
Trigger: GCTGGACGATGGGTTGGGCCATGGCACATTCGTGGC...TGAGCCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCTGACGGGATCCACATTTGGGTCTCCCAAATaGGCCTCCAGAACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: AGSLTGGRATKSLLTGSTFGSPK*ASRTLE
Trigger: CTCCAAGGTTCTGGAGGCCCATTTGGGAGACCCAAA...TGTGGATCCCGTCAGGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp CACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTCGTTTGATGTTTGGATaGTCTTCAAGTGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: HHSSAHPPAPSVKALSGPRLMFG*SSSVSS
Trigger: GCTGCTAACACTTGAAGATCATCCAAACATCAAACG...AGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TGCAGTCAGAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCCATGGTTGGCCAGGGTaGACTCCCCTTCATACAGGC +
Preference number: 4 (lower is better)
Translates to: CSQKTPDSLSSSPESLVRHGWPG*TPLHTG
Trigger: GCCTGTATGAAGGGGAGTTCACCCTGGCCAACCATG...GCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTCTGACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TGGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCCAATCCTTGGTCCTTaGAAGTCTGTGTTATCACGA +
Preference number: 4 (lower is better)
Translates to: WCAQLPAGSLTGGRATKSPILGP*KSVLSR
Trigger: TCGTGATAACACAGACTTTCAAGGACCAAGGATTGG...GGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTGCTCTTGGCCTTGTTaGTTTGTACCACAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LNQPPPQLGSPTSAVREGCSWPC*FVPQRR
Trigger: CCTTCTTTGTGGTACAAATCAACAAGGCCAAGAGCA...GCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp GACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCGGTGAACCTGCTGCATaGGCTGCGGGCGCTTCACCC +
Preference number: 4 (lower is better)
Translates to: DSNKPAAGNWIPFKPAATGEPAA*AAGASP
Trigger: GGGTGAAGCGCCCGCAGCTCATGCAGCAGGTTCACC...GGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp ACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTCACGGTCAGCCAGGCTGCCGAATTGTCTACTTCACTaGTCTTCAGGGCACTTGAAA +
Preference number: 4 (lower is better)
Translates to: TSAVREGSLWPSRSARLPNCLLH*SSGHLK
Trigger: TTTCAAGTGCCCTGAAGAGCAGTGAAGTAGACAATT...CGGCAGCCTGGCTGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp GACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCCACGGTCAGCCAGGCTaGCGGTCACACCGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: DSNKPAAGNWIPFKPAATHGQPG*RSHRRG
Trigger: ACCCCTTCGGTGTGACCGGCAGCCTGGCTGACCGTG...GGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp AGAGCCACTAAGTCCCTCCTGACGGGATCCACAGGAATCTTCTCGATGTACCAGTCTGCCTGCAGTGTCTaGGCAACCTGGCGCGGGATG +
Preference number: 4 (lower is better)
Translates to: RATKSLLTGSTGIFSMYQSACSV*ATWRGM
Trigger: CATCCCGCGCCAGGTTGCCCAGACACTGCAGGCAGA...CTGGTACATCGAGAAGATTCCTGTGGATCCCGTCAGGAGGGACTTAGTGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp ATCGAGCTTGCCGTGGCCTTGCTCAAACATGTTGACCCCGGGGAGCCTCCGGGCGCTCAAACTTGCCTGTaGCTTGTAGCTGTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: IELAVALLKHVDPGEPPGAQTCL*LVAVED
Trigger: ATCCTCAACAGCTACAAGCCACAGGCAAGTTTGAGC...GCCCGGAGGCTCCCCGGGGTCAACATGTTTGAGCAAGGCCACGGCAAGCTCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR CCA 90 bp AGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTGCCGTCTTGGTCACAGAAATaGAGATGGCCAGGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: RPQTAFPVLPSLWCAQLPSWSQK*RWPGSP
Trigger: CGGGCTACCTGGCCATCTCCATTTCTGTGACCAAGA...CGGCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp CACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTTGTCATCCAAGCAATTaGAGTCCCCATACAGTACAA +
Preference number: 4 (lower is better)
Translates to: HHSSAHPPAPSVKALSGPCHPSN*SPHTVQ
Trigger: TTGTACTGTATGGGGACTCCAATTGCTTGGATGACA...AGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp GTAGATGGGCTGGGAGCAGTAGGGCCACATGTAGGGACACTCAGTCAGATCTATCAAACGGATGATCCATaGAGTCCGGGCCGCCGATGC +
Preference number: 4 (lower is better)
Translates to: VDGLGAVGPHVGTLSQIYQTDDP*SPGRRC
Trigger: GCATCGGCGGCCCGGACTTCATGGATCATCCGTTTG...ATAGATCTGACTGAGTGTCCCTACATGTGGCCCTACTGCTCCCAGCCCATCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR TCA 90 bp GAGCAGATCGAGCTTGCCGTGGCCTTGCTCAAACATGTTGACCCCGGGGAGCCTGGTAGTCATTCCCCTTaGAGAAAAGCGGGCGATGTT +
Preference number: 4 (lower is better)
Translates to: EQIELAVALLKHVDPGEPGSHSP*RKAGDV
Trigger: AACATCGCCCGCTTTTCTTCAAGGGGAATGACTACC...AGGCTCCCCGGGGTCAACATGTTTGAGCAAGGCCACGGCAAGCTCGATCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR GCA 90 bp CTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCGGCTCATCCACCGGGTTTCATTaGAGGGTACTGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LQLETGSLLNQPPPQLGSSTGFH*RVLWGQ
Trigger: CTGACCCCACAGTACCCTGCAATGAAACCCGGTGGA...TGAGCCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp AGAGCCACTAAGTCCCTCCTGACGGGATCCACAGGAATCTTCTCGATGTACCAGTGCCTTCCCGTAGCATaGCAGAAGCCAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RATKSLLTGSTGIFSMYQCLPVA*QKPEPR
Trigger: CCTGGGCTCTGGCTTCTGGCATGCTACGGGAAGGCA...CTGGTACATCGAGAAGATTCCTGTGGATCCCGTCAGGAGGGACTTAGTGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp AAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCGGCATGGCCCTGAGCAATaGCTTCCCAGGAAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: KPAAGNWIPFKPAATTARHGPEQ*LPRKPL
Trigger: AAGCGGCTTCCTGGGAAGGCATTGCTCAGGGCCATG...CCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp CTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTCACGGTCAACAACTGCTGTTTCCTaGTTTAAAACCTCCAATCCT +
Preference number: 4 (lower is better)
Translates to: LGSPTSAVREGSLWPSRSTTAVS*FKTSNP
Trigger: AGGATTGGAGGTTTTAAAGCAGGAAACAGCAGTTGT...TGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp AGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTGCCGGATGATTGCCACTTCTaGCTCCACCGGGTTTCATTG +
Preference number: 4 (lower is better)
Translates to: RPQTAFPVLPSLWCAQLPDDCHF*LHRVSL
Trigger: CAATGAAACCCGGTGGAGCCAGAAGTGGCAATCATC...CGGCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTGCGGGGAAATAGCCAGGTaGATAGCGGAGGTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: EDPRQPFQFSRVFGAHSCGEIAR*IAEVVV
Trigger: TACCACAACCTCCGCTATCCACCTGGCTATTTCCCC...GCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp TCCCGAGTCTTTGGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGTCCTTAAATTATCCCTaGGGAAATAGCCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: SRVFGAHSCRREVSLAAESLNYP*GNSQVD
Trigger: ATCCACCTGGCTATTTCCCCAGGGATAATTTAAGGA...CTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCAAAGACTCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCATGCTTCTCAGATGCTaGTACATATCCCTGAAATTG +
Preference number: 4 (lower is better)
Translates to: AHSCRREVSLAAEPLSPSMLLRC*YISLKL
Trigger: CAATTTCAGGGATATGTACCAGCATCTGAGAAGCAT...GGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp AGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTGCCGTCTCCTTCACATTTTTaGAGTGGGGATGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: RPQTAFPVLPSLWCAQLPSPSHF*SGDASR
Trigger: GCGAGAAGCATCCCCACTTCAAAAATGTGAAGGAGA...CGGCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp GACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCCAAACGGATGATCCATaGAGTCCGGGCCGCCGATGC +
Preference number: 4 (lower is better)
Translates to: DSNKPAAGNWIPFKPAATQTDDP*SPGRRC
Trigger: GCATCGGCGGCCCGGACTTCATGGATCATCCGTTTG...GGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp GAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTGCGGTAGTCATTCCCCTTaGAGAAAAGCGGGCGATGTT +
Preference number: 4 (lower is better)
Translates to: EDPRQPFQFSRVFGAHSCGSHSP*RKAGDV
Trigger: AACATCGCCCGCTTTTCTTCAAGGGGAATGACTACC...GCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp AAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCGGGACAAGGGCCTCACTTaGGGGCGATTCGATCGAAAG +
Preference number: 4 (lower is better)
Translates to: KPAAGNWIPFKPAATTARDKGLT*GRFDRK
Trigger: CTTTCGATCGAATCGCCCTCAAGTGAGGCCCTTGTC...CCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp CTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTCACGGTCAGTTTCAGCTAAAAGCTaGAACATTACTAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: LGSPTSAVREGSLWPSRSVSAKS*NITNQP
Trigger: TGGCTGATTAGTAATGTTGCAGCTTTTAGCTGAAAC...TGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp ACTAAGTCCCTCCTGACGGGATCCACAGGAATCTTCTCGATGTACCAGGAGCCTGCTGGCTATCACACCTaGCACGAATGTGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: TKSLLTGSTGIFSMYQEPAGYHT*HECAMA
Trigger: GGCCATGGCACATTCGTGGCAGGTGTGATAGCCAGC...AGGCTCCTGGTACATCGAGAAGATTCCTGTGGATCCCGTCAGGAGGGACTTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp GGGCAGGCCCATGTAGAACAGACTCTAACAAACCTGCAGCTGGAAACTGGATCCGACGCGATCAGGGCCTaGTTCATACTGGCGGGATTC +
Preference number: 4 (lower is better)
Translates to: GQAHVEQTLTNLQLETGSDAIRA*FILAGF
Trigger: GAATCCCGCCAGTATGAAGCAGGCCCTGATCGCGTC...GGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTCTGTTCTACATGGGCCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp ATAGGCTCTGAGCAGATCGAGCTTGCCGTGGCCTTGCTCAAACATGTTGACCCCAGCTTGCCGTGGCCTTaGTCAAACATGTTGACCCCG +
Preference number: 4 (lower is better)
Translates to: IGSEQIELAVALLKHVDPSLPWP*SNMLTP
Trigger: CGGGGTCAACATGTTTGAGCAAGGCCACGGCAAGCT...GGGGTCAACATGTTTGAGCAAGGCCACGGCAAGCTCGATCTGCTCAGAGCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR GCA 90 bp GAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTGCCTGGAAACTTCGCGATaGTGCACCCTGACGCATAAT +
Preference number: 4 (lower is better)
Translates to: EDPRQPFQFSRVFGAHSCLETSR*CTLTHN
Trigger: ATTATGCGTCAGGGTGCAGCATCGCGAAGTTTCCAG...GCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp ACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCGGCACTCCCTCATGCTaGCTATCACACCTGCCACGA +
Preference number: 4 (lower is better)
Translates to: TNLQLETGSLLNQPPPQLGTPSC*LSHLPR
Trigger: TCGTGGCAGGTGTGATAGCCAGCATGAGGGAGTGCC...GAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp CTGCAGTCAGAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCCATACGATGTGTACTaGAGGAGGGCATCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LQSEDPRQPFQFSRVFGAPYDVY*RRASRS
Trigger: GCTTCTGGATGCCCTCCTCCAGTACACATCGTATGG...CGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTCTGACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp AAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCGGTTGTCAACAAACGGATaGTCCATGAAGTCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: KPAAGNWIPFKPAATTARLSTNG*SMKSGP
Trigger: CGGCCCGGACTTCATGGATCATCCGTTTGTTGACAA...CCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TCCTCCATAGTAGATGGGCTGGGAGCAGTAGGGCCACATGTAGGGACACTCAGTTTGTCAACAAACGGATaGTCCATGAAGTCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: SSIVDGLGAVGPHVGTLSLSTNG*SMKSGP
Trigger: CGGCCCGGACTTCATGGATCATCCGTTTGTTGACAA...ACTGAGTGTCCCTACATGTGGCCCTACTGCTCCCAGCCCATCTACTATGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR TCA 90 bp ACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCCATACAGGCCATCGCTaGACCCCATGTTCCACACAG +
Preference number: 4 (lower is better)
Translates to: TNLQLETGSLLNQPPPQLHTGHR*TPCSTQ
Trigger: CTGTGTGGAACATGGGGTTCAGCGATGGCCTGTATG...GAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TTGTTTGGAAAGTACATCCTTCCCCTGCAGTCAGAAGACCCCAGACAGCCTTTCCCATCCTCTCTGGAGTaGCTGAGCCTGCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: LFGKYILPLQSEDPRQPFPSSLE*LSLLHW
Trigger: CCAGTGGAGCAGGCTCAGTCACTCCAGAGAGGATGG...GAAAGGCTGTCTGGGGTCTTCTGACTGCAGGGGAAGGATGTACTTTCCAAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp ACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCCTTGGCACTCCCTCATaGTGGCTATCACACCTGCCA +
Preference number: 4 (lower is better)
Translates to: TNLQLETGSLLNQPPPQLLGTPS*WLSHLP
Trigger: TGGCAGGTGTGATAGCCAGCATGAGGGAGTGCCAAG...GAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp TCCATAGTAGATGGGCTGGGAGCAGTAGGGCCACATGTAGGGACACTCAGTCAGCACGCTTCTGGACTGTaGCAGGTAGTCATTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SIVDGLGAVGPHVGTLSQHASGL*QVVIPL
Trigger: AAGGGGAATGACTACCTGGCACAGTCCAGAAGCGTG...CTGACTGAGTGTCCCTACATGTGGCCCTACTGCTCCCAGCCCATCTACTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR CCA 90 bp AGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTGCCGTTCACATTTTTGAAGTaGGGATGCTTCTCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RPQTAFPVLPSLWCAQLPFTFLK*GCFSLS
Trigger: GCTGAGCGAGAAGCATCCCCACTTCAAAAATGTGAA...CGGCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp AGAGCCACTAAGTCCCTCCTGACGGGATCCACAGGAATCTTCTCGATGTACCAGCCAGCGTTCGCTCGTTaGTCCAGTTGGTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RATKSLLTGSTGIFSMYQPAFAR*SSWFSP
Trigger: AGGAGAGAACCAACTGGACCAACGAGCGAACGCTGG...CTGGTACATCGAGAAGATTCCTGTGGATCCCGTCAGGAGGGACTTAGTGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTGCGTGAAGTTCTGCATCTaGAGCAAATCCTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: EDPRQPFQFSRVFGAHSCVKFCI*SKSLAL
Trigger: GAGTGCCAAGGATTTGCTCCAGATGCAGAACTTCAC...GCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCGGGCCTGCTTCATACTaGCGGGATTCACCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: DSNKPAAGNWIPFKPAATGPASY*RDSPAH
Trigger: GTGAGCTGGTGAATCCCGCCAGTATGAAGCAGGCCC...GGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GTAGATGGGCTGGGAGCAGTAGGGCCACATGTAGGGACACTCAGTCAGATCTATTTCCTCCATAGTAGATaGGCTGGGAGCAGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: VDGLGAVGPHVGTLSQIYFLHSR*AGSSRA
Trigger: GGCCCTACTGCTCCCAGCCCATCTACTATGGAGGAA...ATAGATCTGACTGAGTGTCCCTACATGTGGCCCTACTGCTCCCAGCCCATCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR CCA 90 bp GGGCAGGCCCATGTAGAACAGACTCTAACAAACCTGCAGCTGGAAACTGGATCCAGGCAAAGACAGGAATaGTCTGGCCCACCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GQAHVEQTLTNLQLETGSRQRQE*SGPPPG
Trigger: ACCAGGAGGTGGGCCAGACCATTCCTGTCTTTGCCT...GGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTCTGTTCTACATGGGCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp ATTAACAACTGTCGGCATTCCTCCATAGTAGATGGGCTGGGAGCAGTAGGGCCAGGATCTGATAGGCTCTaGGCAGATCGAGCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: INNCRHSSIVDGLGAVGPGSDRL*ADRACR
Trigger: ACGGCAAGCTCGATCTGCTCAGAGCCTATCAGATCC...TGGCCCTACTGCTCCCAGCCCATCTACTATGGAGGAATGCCGACAGTTGTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR TCA 90 bp GGGCAGGCCCATGTAGAACAGACTCTAACAAACCTGCAGCTGGAAACTGGATCCCGGAGGTTGTGGTACTaGTCCCAGAGAACTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GQAHVEQTLTNLQLETGSRRLWY*SQRTLL
Trigger: CAAGAGAGTTCTCTGGGATCAGTACCACAACCTCCG...GGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTCTGTTCTACATGGGCCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp TTGTTTGGAAAGTACATCCTTCCCCTGCAGTCAGAAGACCCCAGACAGCCTTTCAGGGGACGTGATGATTaGCACTTCTGGCTCCACCGG +
Preference number: 4 (lower is better)
Translates to: LFGKYILPLQSEDPRQPFRGRDD*HFWLHR
Trigger: CCGGTGGAGCCAGAAGTGGCAATCATCACGTCCCCT...GAAAGGCTGTCTGGGGTCTTCTGACTGCAGGGGAAGGATGTACTTTCCAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp TTGTTTGGAAAGTACATCCTTCCCCTGCAGTCAGAAGACCCCAGACAGCCTTTCCAGAGCACATCTGCCTaGAGTGTCTGGGCAACCTGG +
Preference number: 4 (lower is better)
Translates to: LFGKYILPLQSEDPRQPFQSTSA*SVWATW
Trigger: CCAGGTTGCCCAGACACTGCAGGCAGATGTGCTCTG...GAAAGGCTGTCTGGGGTCTTCTGACTGCAGGGGAAGGATGTACTTTCCAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp GCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCTGACGGGATCCACATATCTTCAAAGTCAATaGCGCCTACTCCAATCACAT +
Preference number: 4 (lower is better)
Translates to: AGSLTGGRATKSLLTGSTYLQSQ*RLLQSH
Trigger: ATGTGATTGGAGTAGGCGGCATTGACTTTGAAGATA...TGTGGATCCCGTCAGGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp ACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCTCTGGAGCAAATCCTTaGCACTCCCTCATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TNLQLETGSLLNQPPPQLSGANP*HSLMLA
Trigger: AGCCAGCATGAGGGAGTGCCAAGGATTTGCTCCAGA...GAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp ACATGTAGGGACACTCAGTCAGATCTATGTAGCTGGGGCTCAAACTTGCCTGTGGGGCCTGCTTCATACTaGCGGGATTCACCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: TCRDTQSDLCSWGSNLPVGPASY*RDSPAH
Trigger: GTGAGCTGGTGAATCCCGCCAGTATGAAGCAGGCCC...CACAGGCAAGTTTGAGCCCCAGCTACATAGATCTGACTGAGTGTCCCTACATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR CCA 90 bp CTGGGAGCAGTAGGGCCACATGTAGGGACACTCAGTCAGATCTATGTAGCTGGGAGATCGAGCTTGCCGTaGCCTTGCTCAAACATGTTG +
Preference number: 4 (lower is better)
Translates to: LGAVGPHVGTLSQIYVAGRSSLP*PCSNML
Trigger: CAACATGTTTGAGCAAGGCCACGGCAAGCTCGATCT...CCCAGCTACATAGATCTGACTGAGTGTCCCTACATGTGGCCCTACTGCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR CCA 90 bp CTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCGGCTCAGCTCAAACTTGCCTGTaGCTTGTAGCTGTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LQLETGSLLNQPPPQLGSAQTCL*LVAVED
Trigger: ATCCTCAACAGCTACAAGCCACAGGCAAGTTTGAGC...TGAGCCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp AGAGCCACTAAGTCCCTCCTGACGGGATCCACAGGAATCTTCTCGATGTACCAGTTAAAGGCTGTGGCTTaGCCCAAGACAAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: RATKSLLTGSTGIFSMYQLKAVA*PKTSVD
Trigger: GTCCACGCTTGTCTTGGGCCAAGCCACAGCCTTTAA...CTGGTACATCGAGAAGATTCCTGTGGATCCCGTCAGGAGGGACTTAGTGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TTGTTTGGAAAGTACATCCTTCCCCTGCAGTCAGAAGACCCCAGACAGCCTTTCGGATCTGATAGGCTCTaGGCAGATCGAGCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: LFGKYILPLQSEDPRQPFGSDRL*ADRACR
Trigger: ACGGCAAGCTCGATCTGCTCAGAGCCTATCAGATCC...GAAAGGCTGTCTGGGGTCTTCTGACTGCAGGGGAAGGATGTACTTTCCAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp GACATTAACAACTGTCGGCATTCCTCCATAGTAGATGGGCTGGGAGCAGTAGGGGCTGGGGCTCAAACTTaGCTGTGGCTTGTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: DINNCRHSSIVDGLGAVGAGAQT*LWLVAV
Trigger: AACAGCTACAAGCCACAGGCAAGTTTGAGCCCCAGC...CCCTACTGCTCCCAGCCCATCTACTATGGAGGAATGCCGACAGTTGTTAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR GCA 90 bp CTGCAGTCAGAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCCCATGCTTCTCAGATaGTGGTACATATCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LQSEDPRQPFQFSRVFGAPMLLR*WYISLK
Trigger: TTTCAGGGATATGTACCAGCATCTGAGAAGCATGGG...CGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTCTGACTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp AAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCGGCATTGCAGGGTACTGTaGGGTCAGATTCAGCATACT +
Preference number: 4 (lower is better)
Translates to: KPAAGNWIPFKPAATTARHCRVL*GQIQHT
Trigger: AGTATGCTGAATCTGACCCCACAGTACCCTGCAATG...CCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp CTGGGAGCAGTAGGGCCACATGTAGGGACACTCAGTCAGATCTATGTAGCTGGGTCAGATCTATGTAGCTaGGGCTCAAACTTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LGAVGPHVGTLSQIYVAGSDLCS*GSNLPV
Trigger: CACAGGCAAGTTTGAGCCCCAGCTACATAGATCTGA...CCCAGCTACATAGATCTGACTGAGTGTCCCTACATGTGGCCCTACTGCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR CCA 90 bp GATCTGATAGGCTCTGAGCAGATCGAGCTTGCCGTGGCCTTGCTCAAACATGTTACCAGCTCACGCTTCTaGACTGTGCCAGGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: DLIGSEQIELAVALLKHVTSSRF*TVPGSH
Trigger: ATGACTACCTGGCACAGTCCAGAAGCGTGAGCTGGT...AACATGTTTGAGCAAGGCCACGGCAAGCTCGATCTGCTCAGAGCCTATCAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR TCA 90 bp ACTAAGTCCCTCCTGACGGGATCCACAGGAATCTTCTCGATGTACCAGGAGCCTAGCAAAGTGCCATACTaGCTGGCATCAAAACACGTG +
Preference number: 4 (lower is better)
Translates to: TKSLLTGSTGIFSMYQEPSKVPY*LASKHV
Trigger: CACGTGTTTTGATGCCAGTCAGTATGGCACTTTGCT...AGGCTCCTGGTACATCGAGAAGATTCCTGTGGATCCCGTCAGGAGGGACTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TGTAGAACAGACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCACCTCTCTGGAGTGACTaGGCCTGCTCCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CRTDSNKPAAGNWIPFKPPLWSD*ACSTGR
Trigger: CCTCCCAGTGGAGCAGGCTCAGTCACTCCAGAGAGG...TGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTCTGTTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp AATTACAAAACATGGTGGCAGGTGATACTTACAAAAATAAAGCGAAGGTCTATGTCCGCCGACCCAGCGTaGCCTGTCTGTCCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: NYKTWWQVILTKIKRRSMSADPA*PVCPAL
Trigger: GAGCGCGGGACAGACAGGGCACGCTGGGTCGGCGGA...CATAGACCTTCGCTTTATTTTTGTAAGTATCACCTGCCACCATGTTTTGTAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp AGTAGATGGGCTGGGAGCAGTAGGGCCACATGTAGGGACACTCAGTCAGATCTACAGGGTTATTCAGAGTaGCATAAAGAGGTCCGTCAT +
Preference number: 4 (lower is better)
Translates to: SRWAGSSRATCRDTQSDLQGYSE*HKEVRH
Trigger: ATGACGGACCTCTTTATGGCACTCTGAATAACCCTG...TAGATCTGACTGAGTGTCCCTACATGTGGCCCTACTGCTCCCAGCCCATCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR GCA 90 bp ACTAAGTCCCTCCTGACGGGATCCACAGGAATCTTCTCGATGTACCAGGAGCCTCTACAAAGTAGCCCATaGTTCTCAGATGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: TKSLLTGSTGIFSMYQEPLQSSP*FSDAGT
Trigger: TGTACCAGCATCTGAGAAGCATGGGCTACTTTGTAG...AGGCTCCTGGTACATCGAGAAGATTCCTGTGGATCCCGTCAGGAGGGACTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp TGTAGAACAGACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCATGTACCAGGAGCCTCTaGCCATCACAGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CRTDSNKPAAGNWIPFKPCTRSL*PSQEGR
Trigger: CCTGCCCTCCTGTGATGGGCAGAGGCTCCTGGTACA...TGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTCTGTTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCGTTTCCAAAGGTTACTaGGCGCCGTCTCGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: DSNKPAAGNWIPFKPAATVSKGY*APSRLK
Trigger: CTTTAAACGAGACGGCGCCCAGTAACCTTTGGAAAC...GGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp AGAGCCACTAAGTCCCTCCTGACGGGATCCACAGGAATCTTCTCGATGTACCAGCCAATCACATCCATTTaGTCAGCAGGGTTATTCAGA +
Preference number: 4 (lower is better)
Translates to: RATKSLLTGSTGIFSMYQPITSI*SAGLFR
Trigger: TCTGAATAACCCTGCTGATCAAATGGATGTGATTGG...CTGGTACATCGAGAAGATTCCTGTGGATCCCGTCAGGAGGGACTTAGTGGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp GACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCGCTGGTACATATCCCTaGAATTGGTGTGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: DSNKPAAGNWIPFKPAATAGTYP*NWCGCD
Trigger: ATCACATCCACACCAATTTCAGGGATATGTACCAGC...GGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp TGTAGAACAGACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCACACCTGCCACGAATGTaGCATGGCCCAACCCATCGT +
Preference number: 4 (lower is better)
Translates to: CRTDSNKPAAGNWIPFKPHLPRM*HGPTHR
Trigger: ACGATGGGTTGGGCCATGGCACATTCGTGGCAGGTG...TGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTCTGTTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp AAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCGGGATAAAGTCCCAAAATaGGGACGTTTTCAACAACTG +
Preference number: 4 (lower is better)
Translates to: KPAAGNWIPFKPAATTARDKVPK*GRFQQL
Trigger: CAGTTGTTGAAAACGTCCCCATTTTGGGACTTTATC...CCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGGAACTGAGCCTGCTCCACTaGGAGGGCGCTGGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: VCTVIKKIMESMLFLMMELSLLH*EGAGGS
Trigger: GGAACCGCCAGCGCCCTCCCAGTGGAGCAGGCTCAG...TTCCATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp GACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCTTTTGTGGTTCAGCCTaGAGAGAGGCTTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: DSNKPAAGNWIPFKPAATFCGSA*REAFIS
Trigger: AGAAATGAAAGCCTCTCTTCAGGCTGAACCACAAAA...GGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp GACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCCAGATTCAGCATACTTaGGGGAACGAAAGACTTTTC +
Preference number: 4 (lower is better)
Translates to: DSNKPAAGNWIPFKPAATQIQHT*GNERLF
Trigger: GAAAAGTCTTTCGTTCCCTCAAGTATGCTGAATCTG...GGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp GACATTAACAACTGTCGGCATTCCTCCATAGTAGATGGGCTGGGAGCAGTAGGGCCAATCACATCCATTTaGTCAGCAGGGTTATTCAGA +
Preference number: 4 (lower is better)
Translates to: DINNCRHSSIVDGLGAVGPITSI*SAGLFR
Trigger: TCTGAATAACCCTGCTGATCAAATGGATGTGATTGG...CCCTACTGCTCCCAGCCCATCTACTATGGAGGAATGCCGACAGTTGTTAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR CCA 90 bp ACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCAGGGTAGTCACTGGATaGATTGTTTCGAGGTATAAT +
Preference number: 4 (lower is better)
Translates to: TNLQLETGSLLNQPPPQLRVVTG*IVSRYN
Trigger: ATTATACCTCGAAACAATCCATCCAGTGACTACCCT...GAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp TTGTTTGGAAAGTACATCCTTCCCCTGCAGTCAGAAGACCCCAGACAGCCTTTCCCTTGTCCAGGTCAATaGAGAGTAGCTTCTGATGTT +
Preference number: 4 (lower is better)
Translates to: LFGKYILPLQSEDPRQPFPCPGQ*RVASDV
Trigger: AACATCAGAAGCTACTCTCCATTGACCTGGACAAGG...GAAAGGCTGTCTGGGGTCTTCTGACTGCAGGGGAAGGATGTACTTTCCAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp GACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCTTAAAATGGCATAGTTaGAGGCGTCCAAAAACCAAG +
Preference number: 4 (lower is better)
Translates to: DSNKPAAGNWIPFKPAATLKWHS*RRPKTK
Trigger: CTTGGTTTTTGGACGCCTTCAACTATGCCATTTTAA...GGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp GTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGGAACTTGCTCAAACATGTTaGCCCCGGGGAGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: VCTVIKKIMESMLFLMMELAQTC*PRGASG
Trigger: CCCGGAGGCTCCCCGGGGTCAACATGTTTGAGCAAG...TTCCATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TTGTTTGGAAAGTACATCCTTCCCCTGCAGTCAGAAGACCCCAGACAGCCTTTCATGGAGAGTAGCTTCTaGTGTTTCCAAAGGTTACTG +
Preference number: 4 (lower is better)
Translates to: LFGKYILPLQSEDPRQPFMESSF*CFQRLL
Trigger: CAGTAACCTTTGGAAACATCAGAAGCTACTCTCCAT...GAAAGGCTGTCTGGGGTCTTCTGACTGCAGGGGAAGGATGTACTTTCCAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp TGTGACTCCCATGCCGTTGAGGATGGTGACATTAACAACTGTCGGCATTCCTCCTATCTTCAAAGTCAATaGCGCCTACTCCAATCACAT +
Preference number: 4 (lower is better)
Translates to: CDSHAVEDGDINNCRHSSYLQSQ*RLLQSH
Trigger: ATGTGATTGGAGTAGGCGGCATTGACTTTGAAGATA...GGAGGAATGCCGACAGTTGTTAATGTCACCATCCTCAACGGCATGGGAGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR CCA 90 bp TCAGTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGAGTGTCTGGGCAACCTaGCGCGGGATGGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SVCTVIKKIMESMLFLMMSVWAT*RGMALS
Trigger: GCTGAGAGCCATCCCGCGCCAGGTTGCCCAGACACT...CATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCAAAACCTCCAATCCTTaGTCCTTGAAAGTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: DSNKPAAGNWIPFKPAATKTSNP*SLKVCV
Trigger: AACACAGACTTTCAAGGACCAAGGATTGGAGGTTTT...GGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp TGTAGAACAGACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGGGCCTCCAGAACCTTaGAGTACCGATGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: CRTDSNKPAAGNWIPFKPGPPEP*STDEDG
Trigger: ACCATCTTCATCGGTACTCCAAGGTTCTGGAGGCCC...TGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTCTGTTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TTGTTTGGAAAGTACATCCTTCCCCTGCAGTCAGAAGACCCCAGACAGCCTTTCAAATTGGTGTGGATGTaGTCACCATTCCAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: LFGKYILPLQSEDPRQPFKLVWM*SPFQSK
Trigger: TTTAGACTGGAATGGTGATCACATCCACACCAATTT...GAAAGGCTGTCTGGGGTCTTCTGACTGCAGGGGAAGGATGTACTTTCCAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TTGTTTGGAAAGTACATCCTTCCCCTGCAGTCAGAAGACCCCAGACAGCCTTTCCTTCACCGACAATGGTaGAATCAAGACCTCAAATTA +
Preference number: 4 (lower is better)
Translates to: LFGKYILPLQSEDPRQPFLHRQW*NQDLKL
Trigger: TAATTTGAGGTCTTGATTTCACCATTGTCGGTGAAG...GAAAGGCTGTCTGGGGTCTTCTGACTGCAGGGGAAGGATGTACTTTCCAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp TGTAGAACAGACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCATTTTTGAAGTGGGGATaGTTCTCGCTCAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: CRTDSNKPAAGNWIPFKPFLKWG*FSLSPV
Trigger: CACTGGGCTGAGCGAGAAGCATCCCCACTTCAAAAA...TGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTCTGTTCTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp TGTAGAACAGACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCACCTGCAGCTGGAAACTaGATCCCTTTTAAACCAGCC +
Preference number: 4 (lower is better)
Translates to: CRTDSNKPAAGNWIPFKPPAAGN*IPFKPA
Trigger: GGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGG...TGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTCTGTTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp TGTAGAACAGACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGGAACAGCCAGGGCATaGGGCCTTTTCAAAAGATTT +
Preference number: 4 (lower is better)
Translates to: CRTDSNKPAAGNWIPFKPGTARA*GLFKRF
Trigger: AAATCTTTTGAAAAGGCCCCATGCCCTGGCTGTTCC...TGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTCTGTTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp TCAGTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGACCTTCAAAGTCAGGTaGGAACAGCCAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: SVCTVIKKIMESMLFLMMTFKVR*EQPGHG
Trigger: CCCATGCCCTGGCTGTTCCCACCTGACTTTGAAGGT...CATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGGAATTCCTCCATAGTAGATaGGCTGGGAGCAGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: VCTVIKKIMESMLFLMMEFLHSR*AGSSRA
Trigger: GGCCCTACTGCTCCCAGCCCATCTACTATGGAGGAA...TTCCATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR CAA 72 bp AACAAGCGTCTTTTAGCTTGGTCAGGGTTGTATCATTaGTTTGGAAAGTACATCCTTCCCCTGCAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: NKRLLAWSGLYH*FGKYILPLQSE
Trigger: TTCTGACTGCAGGGGAAGGATGTACTTTCCAAACAAATGATACAACCCTGACCAAGCTAAAAGACGCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp GCATGTTTCCTTCAAATCTCAGTCTGTACTGTCATTAAAAAGATCATGGAATCTATCATGACATGGCCCTaGGCAATGCCTTCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: ACFLQISVCTVIKKIMESIMTWP*AMPSQE
Trigger: TTCCTGGGAAGGCATTGCTCAGGGCCATGTCATGAT...AGATTCCATGATCTTTTTAATGACAGTACAGACTGAGATTTGAAGGAAACATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp GCATGTTTCCTTCAAATCTCAGTCTGTACTGTCATTAAAAAGATCATGGAATCTCCTGTATATCCCATCTaGCAGAGCACATCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ACFLQISVCTVIKKIMESPVYPI*QSTSAC
Trigger: GCAGGCAGATGTGCTCTGGCAGATGGGATATACAGG...AGATTCCATGATCTTTTTAATGACAGTACAGACTGAGATTTGAAGGAAACATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGGAATCCCATGGCCTTTTGTaGTTCAGCCTGAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VCTVIKKIMESMLFLMMESHGLL*FSLKRG
Trigger: GCCTCTCTTCAGGCTGAACCACAAAAGGCCATGGGA...TTCCATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GCATGTTTCCTTCAAATCTCAGTCTGTACTGTCATTAAAAAGATCATGGAATCTGTTGTCTCCGTTCTGTaGCAAATAGGGCTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: ACFLQISVCTVIKKIMESVVSVL*QIGLPV
Trigger: GACTGGCAGCCCTATTTGCCACAGAACGGAGACAAC...AGATTCCATGATCTTTTTAATGACAGTACAGACTGAGATTTGAAGGAAACATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GCATGTTTCCTTCAAATCTCAGTCTGTACTGTCATTAAAAAGATCATGGAATCTTCACAGAAATGGAGATaGCCAGGTAGCCCGACCAAG +
Preference number: 4 (lower is better)
Translates to: ACFLQISVCTVIKKIMESSQKWR*PGSPTK
Trigger: CTTGGTCGGGCTACCTGGCCATCTCCATTTCTGTGA...AGATTCCATGATCTTTTTAATGACAGTACAGACTGAGATTTGAAGGAAACATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343411.8
3UTR CAA 72 bp ATAGCCTTTAACAAGCGTCTTTTAGCTTGGTCAGGGTaGTATCATTTGTTTGGAAAGTACATCCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: IAFNKRLLAWSG*YHLFGKYILPL
Trigger: CAGGGGAAGGATGTACTTTCCAAACAAATGATACAACCCTGACCAAGCTAAAAGACGCTTGTTAAAGGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGGAACGAAAGACTTTTCGTTaGGGCGTGACCCGTTTGATG +
Preference number: 4 (lower is better)
Translates to: VCTVIKKIMESMLFLMMERKTFR*GVTRLM
Trigger: CATCAAACGGGTCACGCCCCAACGAAAAGTCTTTCG...TTCCATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TCAGTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGAACGTCCAATGGGGTTaGTCAATCAACCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: SVCTVIKKIMESMLFLMMNVQWG*SINHCE
Trigger: CTCACAGTGGTTGATTGATCAACCCCATTGGACGTT...CATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp TCAGTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGGGGGAGCTTTACTGTTaGAGTCTGTTCTGCACCATT +
Preference number: 4 (lower is better)
Translates to: SVCTVIKKIMESMLFLMMGELYC*SLFCTI
Trigger: AATGGTGCAGAACAGACTTCAACAGTAAAGCTCCCC...CATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR TCA 90 bp AATTACAAAACATGGTGGCAGGTGATACTTACAAAAATAAAGCGAAGGTCTATGACCTTGGAGTACCGATaGAGATGGTTTCCTTCCATC +
Preference number: 4 (lower is better)
Translates to: NYKTWWQVILTKIKRRSMTLEYR*RWFPSI
Trigger: GATGGAAGGAAACCATCTTCATCGGTACTCCAAGGT...CATAGACCTTCGCTTTATTTTTGTAAGTATCACCTGCCACCATGTTTTGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp GTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGGAAGAAACTTCGCGATGCTaGACCCTGACGCATAATACA +
Preference number: 4 (lower is better)
Translates to: VCTVIKKIMESMLFLMMEETSRC*TLTHNT
Trigger: TGTATTATGCGTCAGGGTGCAGCATCGCGAAGTTTC...TTCCATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR GCA 90 bp TCAGTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGCAGGGTTATTCAGAGTaGCATAAAGAGGTCCGTCAT +
Preference number: 4 (lower is better)
Translates to: SVCTVIKKIMESMLFLMMQGYSE*HKEVRH
Trigger: ATGACGGACCTCTTTATGGCACTCTGAATAACCCTG...CATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CCA 90 bp GTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGGAATCAAATTACAAAACATaGTGGCAGGTGATACTTACA +
Preference number: 4 (lower is better)
Translates to: VCTVIKKIMESMLFLMMESNYKT*WQVILT
Trigger: TGTAAGTATCACCTGCCACCATGTTTTGTAATTTGA...TTCCATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS CCA 90 bp CCAACTCTCGCGAGACTGGGCGACCGGGCCAGCGAGGCCCACAGCTaGGAGCCTCAGCTCCGCCGACCCAGCGTGCCCTGTCTGTCCCGC +
Preference number: 5 (lower is better)
Translates to: PTLARLGDRASEAHS*EPQLRRPSVPCLSR
Trigger: GCGGGACAGACAGGGCACGCTGGGTCGGCGGAGCTGAGGCTCCCAGCTGTGGGCCTCGCTGGCCCGGTCGCCCAGTCTCGCGAGAGTTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp AAACCAGCCGCCACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTaGAGGCTCTCTCTGGCCCTCACGGTCAGCCAGGCTGCCGGTCAC +
Preference number: 5 (lower is better)
Translates to: KPAATTARLTHQRRP*RLSLALTVSQAAGH
Trigger: GTGACCGGCAGCCTGGCTGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS TCA 90 bp GCAGCTGGCGGCCCCACGGCACCAGCACAGGCCCCAGAGGCGGGTTaGGGCTCCACCACCACATACCGCCCAGGCGATCTCAGGCAGTTA +
Preference number: 5 (lower is better)
Translates to: AAGGPTAPAQAPEAG*GSTTTYRPGDLRQL
Trigger: TAACTGCCTGAGATCGCCTGGGCGGTATGTGGTGGTGGAGCCTCAACCCGCCTCTGGGGCCTGTGCTGGTGCCGTGGGGCCGCCAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS CCA 90 bp GGCCCTCACGGTCAGCCAGGCTGCCGGTCACACCGAAGGGGTCTTTaGCGGGTGAACCTGCTGCATGAGCTGCGGGCGCTTCACCCTGGG +
Preference number: 5 (lower is better)
Translates to: GPHGQPGCRSHRRGL*RVNLLHELRALHPG
Trigger: CCCAGGGTGAAGCGCCCGCAGCTCATGCAGCAGGTTCACCCGCCAAAGACCCCTTCGGTGTGACCGGCAGCCTGGCTGACCGTGAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS CCA 90 bp CCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTaGCCCTCACGGTCAGCCAGGCTGCCGGTCACACCGAAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: PQLGSPTSAVREGSL*PSRSARLPVTPKGS
Trigger: AGACCCCTTCGGTGTGACCGGCAGCCTGGCTGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS TCA 90 bp CTGCCGGTCACACCGAAGGGGTCTTTGGCGGGTGAACCTGCTGCATaGGCTGCGGGCGCTTCACCCTGGGCTTCCTCCGCTTCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: LPVTPKGSLAGEPAA*AAGASPWASSASAC
Trigger: GCAGGCCGAAGCGGAGGAAGCCCAGGGTGAAGCGCCCGCAGCTCATGCAGCAGGTTCACCCGCCAAAGACCCCTTCGGTGTGACCGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS-3UTR CAA 90 bp TCCCGAGTCTTTGGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGACGAGCGAGAGGCCGTaGTCCACGTCCCTCCGGAGC +
Preference number: 5 (lower is better)
Translates to: SRVFGAHSCRREVSLAAETSERP*STSLRS
Trigger: GCTCCGGAGGGACGTGGACAACGGCCTCTCGCTCGT...CTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCAAAGACTCGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp ACGGTCAGCCAGGCTGCCGGTCACACCGAAGGGGTCTTTGGCGGGTaGACCTGCTGCATGAGCTGCGGGCGCTTCACCCTGGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: TVSQAAGHTEGVFGG*TCCMSCGRFTLGFL
Trigger: GAGGAAGCCCAGGGTGAAGCGCCCGCAGCTCATGCAGCAGGTTCACCCGCCAAAGACCCCTTCGGTGTGACCGGCAGCCTGGCTGACCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS GCA 90 bp GCGCCGTCCGTGAAGGCTCTCTCTGGCCCTCACGGTCAGCCAGGCTaGCGGTCACACCGAAGGGGTCTTTGGCGGGTGAACCTGCTGCAT +
Preference number: 5 (lower is better)
Translates to: APSVKALSGPHGQPG*RSHRRGLWRVNLLH
Trigger: ATGCAGCAGGTTCACCCGCCAAAGACCCCTTCGGTGTGACCGGCAGCCTGGCTGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS GCA 90 bp TGGGCAACCTGGCGCGGGATGGCTCTCAGCAGCCGTCTGCTCGAATaGCTTCCCGTAGCATGCCAGAAGCCAGAGCCCAGGGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: WATWRGMALSSRLLE*LPVACQKPEPRERL
Trigger: CAGCCTCTCCCTGGGCTCTGGCTTCTGGCATGCTACGGGAAGGCATTCGAGCAGACGGCTGCTGAGAGCCATCCCGCGCCAGGTTGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS CCA 90 bp CCCCGGGGAGCCTCCGGGCTGACGCGATCAGGGCCTGCTTCATACTaGCGGGATTCACCAGCTCACGCTTCTGGACTGTGCCAGGTAGTC +
Preference number: 5 (lower is better)
Translates to: PRGASGLTRSGPASY*RDSPAHASGLCQVV
Trigger: GACTACCTGGCACAGTCCAGAAGCGTGAGCTGGTGAATCCCGCCAGTATGAAGCAGGCCCTGATCGCGTCAGCCCGGAGGCTCCCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS TCA 90 bp GCCGTGGCCTTGCTCAAACATGTTGACCCCGGGGAGCCTCCGGGCTaGCGCGATCAGGGCCTGCTTCATACTGGCGGGATTCACCAGCTC +
Preference number: 5 (lower is better)
Translates to: AVALLKHVDPGEPPG*RDQGLLHTGGIHQL
Trigger: GAGCTGGTGAATCCCGCCAGTATGAAGCAGGCCCTGATCGCGTCAGCCCGGAGGCTCCCCGGGGTCAACATGTTTGAGCAAGGCCACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343411.8
ENST00000562788.2
ENST00000563231.5
ENST00000564643.1
ENST00000565863.1
ENST00000569770.5
CDS GCA 90 bp GCCTCCCTGAGAGCACCAGGCATACGTGGATCCTGCTTCTCAAGCTaGACCCACGTGCAGTGGGCGGGCGGCTCTGCGCAACTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: ASLRAPGIRGSCFSS*THVQWAGGSAQLLH
Trigger: GTGAAGCAGTTGCGCAGAGCCGCCCGCCCACTGCACGTGGGTGCAGCTTGAGAAGCAGGATCCACGTATGCCTGGTGCTCTCAGGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565863.1
CDS CCA 90 bp GAGTGGCGTGAGGGTCGGGGTGCACGTGGGAAAGCAGCTGCACACTaGGTCCTCGATCATGGCCCTCTGGGGACTAAGGATGGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: EWREGRGARGKAAAH*VLDHGPLGTKDGLS
Trigger: CGAGAGGCCATCCTTAGTCCCCAGAGGGCCATGATCGAGGACCCAGTGTGCAGCTGCTTTCCCACGTGCACCCCGACCCTCACGCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS CCA 90 bp CCCCGGGGAGCCTCCGGGCTGACGCGATCAGGGCCTGCTTCATACTaGCGGGATTCACCAGCTCACGCTTCTGGACTGTGCTGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: PRGASGLTRSGPASY*RDSPAHASGLCWRK
Trigger: TTTCCTCCAGCACAGTCCAGAAGCGTGAGCTGGTGAATCCCGCCAGTATGAAGCAGGCCCTGATCGCGTCAGCCCGGAGGCTCCCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564643.1
CDS-3UTR CAA 90 bp TTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCACGTCCCTCCGGAGCTaGGCGATCTCTTCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: LNQPPPQLGSPTSAVREGTSLRS*AISSGK
Trigger: CTTCCCTGAAGAGATCGCCAAGCTCCGGAGGGACGT...GCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp GTGACTGAGCCTGCTCCACTGGGAGGGCGCTGGCGGTTCCCAGAGTaGCTGAGGCTAGGCGGTGTCACCCCATACGATGTGTACTGGAGG +
Preference number: 5 (lower is better)
Translates to: VTEPAPLGGRWRFPE*LRLGGVTPYDVYWR
Trigger: CCTCCAGTACACATCGTATGGGGTGACACCGCCTAGCCTCAGTCACTCTGGGAACCGCCAGCGCCCTCCCAGTGGAGCAGGCTCAGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343411.8
ENST00000561936.1
ENST00000562886.1
ENST00000564049.1
ENST00000570064.5
CDS TCA 90 bp CCCAAGGCATCCTGCCCATCCACTCACCTTCCATCCTCTCTGGAGTaGCTGAGCCTGCTCCACTGGGAGGGCGCTGGCGGTTCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: PKASCPSTHLPSSLE*LSLLHWEGAGGSQS
Trigger: ACTCTGGGAACCGCCAGCGCCCTCCCAGTGGAGCAGGCTCAGTCACTCCAGAGAGGATGGAAGGTGAGTGGATGGGCAGGATGCCTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS CCA 90 bp CCCCGGGGAGCCTCCGGGCTGACGCGATCAGGGCCTGCTTCATACTaGCGGGATTCACCAGCTCACGCTTCTGGACTGTGCTCACTAACA +
Preference number: 5 (lower is better)
Translates to: PRGASGLTRSGPASY*RDSPAHASGLCSLT
Trigger: TGTTAGTGAGCACAGTCCAGAAGCGTGAGCTGGTGAATCCCGCCAGTATGAAGCAGGCCCTGATCGCGTCAGCCCGGAGGCTCCCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562788.2
ENST00000565863.1
ENST00000569770.5
CDS CCA 90 bp CATGACCTGACCAGGGCTCCACTCCCAGTGCCCCAGGGTTCCAGGTaGTCAGCACCACTGTCCACCAGGTTGCACCAACTGCCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: HDLTRAPLPVPQGSR*SAPLSTRLHQLPEC
Trigger: GCACTCAGGCAGTTGGTGCAACCTGGTGGACAGTGGTGCTGACCACCTGGAACCCTGGGGCACTGGGAGTGGAGCCCTGGTCAGGTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS-3UTR CAA 90 bp CACCACAGCTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTATCTGGAGCAAATCCTaGGCACTCCCTCATGCTGGC +
Preference number: 5 (lower is better)
Translates to: HHSSAHPPAPSVKALSGPIWSKS*ALPHAG
Trigger: GCCAGCATGAGGGAGTGCCAAGGATTTGCTCCAGAT...AGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAGCTGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp TGCATTCTCAGTGGCCCAGCCCAGCCAGATAAGCACACACAGCCATaGCCTGACCAGGGCTCCACTCCCAGTGCCCCAGGGTTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: CILSGPAQPDKHTQP*PDQGSTPSAPGFQV
Trigger: CACCTGGAACCCTGGGGCACTGGGAGTGGAGCCCTGGTCAGGTCATGGCTGTGTGTGCTTATCTGGCTGGGCTGGGCCACTGAGAATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 90 bp GTCCTCACCTGTGAGAGCGGGACGGTAAACACACTCAGAGTGGCGTaGGGGTCGGGGTGCACGTGGGAAAGCAGCTGCACACTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: VLTCESGTVNTLRVA*GSGCTWESSCTLGP
Trigger: AGGACCCAGTGTGCAGCTGCTTTCCCACGTGCACCCCGACCCTCACGCCACTCTGAGTGTGTTTACCGTCCCGCTCTCACAGGTGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS CCA 90 bp TATCCCATCTGCCAGAGCACATCTGCCTGCAGTGTCTGGGCAACCTaGCGCGGGATGGCTCTCAGCAGCCGTCTGCTCGAATGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: YPICQSTSACSVWAT*RGMALSSRLLECLP
Trigger: GGGAAGGCATTCGAGCAGACGGCTGCTGAGAGCCATCCCGCGCCAGGTTGCCCAGACACTGCAGGCAGATGTGCTCTGGCAGATGGGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS CCA 90 bp CACGTGGGAAAGCAGCTGCACACTGGGTCCTCGATCATGGCCCTCTaGGGACTAAGGATGGCCTCTCGGCAGGTTAGAGCCGCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: HVGKQLHTGSSIMAL*GLRMASRQVRAAEC
Trigger: GCACTCAGCGGCTCTAACCTGCCGAGAGGCCATCCTTAGTCCCCAGAGGGCCATGATCGAGGACCCAGTGTGCAGCTGCTTTCCCACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS GCA 90 bp CTCTGGGGACTAAGGATGGCCTCTCGGCAGGTTAGAGCCGCTGAGTaGTGCTCTACCCGCAGCCATTACGAAAACCACTCAGCGGCGCAC +
Preference number: 5 (lower is better)
Translates to: LWGLRMASRQVRAAE*CSTRSHYENHSAAH
Trigger: GTGCGCCGCTGAGTGGTTTTCGTAATGGCTGCGGGTAGAGCAGCACTCAGCGGCTCTAACCTGCCGAGAGGCCATCCTTAGTCCCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS GCA 90 bp GAGCACCAGGCATACGTGGATCCTGCTTCTCAAGCTGCACCCACGTaGAGTGGGCGGGCGGCTCTGCGCAACTGCTTCACCTCATTACAG +
Preference number: 5 (lower is better)
Translates to: EHQAYVDPASQAAPT*SGRAALRNCFTSLQ
Trigger: CTGTAATGAGGTGAAGCAGTTGCGCAGAGCCGCCCGCCCACTGCACGTGGGTGCAGCTTGAGAAGCAGGATCCACGTATGCCTGGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565863.1
CDS CCA 90 bp GCACCTGTATATCCCATCTGCCAGAGCACATCTGCCTGCAGTGTCTaGGCAACCTGGCGCGGGATGGCTCTCAGCAGCCGTCTGCTCGAA +
Preference number: 5 (lower is better)
Translates to: APVYPICQSTSACSV*ATWRGMALSSRLLE
Trigger: TTCGAGCAGACGGCTGCTGAGAGCCATCCCGCGCCAGGTTGCCCAGACACTGCAGGCAGATGTGCTCTGGCAGATGGGATATACAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp CTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCCCTTGCTCAAACATGTaGACCCCGGGGAGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: LETGSLLNQPPPQLGSPTPCSNM*TPGSLR
Trigger: CCGGAGGCTCCCCGGGGTCAACATGTTTGAGCAAGG...GGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp CTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTCACGGTCACGATTCGATCGAAAGTaGGGTAACACCACCTTGTCC +
Preference number: 5 (lower is better)
Translates to: LGSPTSAVREGSLWPSRSRFDRK*GNTTLS
Trigger: GGACAAGGTGGTGTTACCCAACTTTCGATCGAATCG...TGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp GAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTGCAGTTCTCCCGAGTCTTaGGTGCGCACAGCTGCCGGC +
Preference number: 5 (lower is better)
Translates to: EDPRQPFQFSRVFGAHSCSSPES*VRTAAG
Trigger: GCCGGCAGCTGTGCGCACCAAAGACTCGGGAGAACT...GCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp GGAATGTCCCAGGCGCCGCTCTCTCCAGGGGACAAGGGCCTCACTTaGGGGCGATTCGATCGAAAGTTGGGTAACACCACCTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GMSQAPLSPGDKGLT*GRFDRKLGNTTLSR
Trigger: CCTGGACAAGGTGGTGTTACCCAACTTTCGATCGAATCGCCCTCAAGTGAGGCCCTTGTCCCCTGGAGAGAGCGGCGCCTGGGACATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS GCA 90 bp TGGGGACTAAGGATGGCCTCTCGGCAGGTTAGAGCCGCTGAGTGCTaGTCTACCCGCAGCCATTACGAAAACCACTCAGCGGCGCACACA +
Preference number: 5 (lower is better)
Translates to: WGLRMASRQVRAAEC*STRSHYENHSAAHT
Trigger: TGTGTGCGCCGCTGAGTGGTTTTCGTAATGGCTGCGGGTAGAGCAGCACTCAGCGGCTCTAACCTGCCGAGAGGCCATCCTTAGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS GCA 90 bp TCAATGCAGCTTGCTGCTAGGAAAGGGGCCAGCTCTGTGAGACCCTaGCTGGCAGGAGAGAGGGGAGAGCTTAGGAAGCTGCGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: SMQLAARKGASSVRP*LAGERGELRKLRLD
Trigger: ATCCAGGCGCAGCTTCCTAAGCTCTCCCCTCTCTCCTGCCAGGCAGGGTCTCACAGAGCTGGCCCCTTTCCTAGCAGCAAGCTGCATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CCA 90 bp CCTGATGCCAACGAAGAAGCCCAAAGCGCCTCTCCACTTCACAGATaGAAGCCTGCCCCCAGCACTGGGCTGACAGCATCTGGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: PDANEEAQSASPLHR*KPAPSTGLTASGAV
Trigger: GACAGCTCCAGATGCTGTCAGCCCAGTGCTGGGGGCAGGCTTCCATCTGTGAAGTGGAGAGGCGCTTTGGGCTTCTTCGTTGGCATCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CCA 90 bp CCAGGCATACGTGGATCCTGCTTCTCAAGCTGCACCCACGTGCAGTaGGCGGGCGGCTCTGCGCAACTGCTTCACCTCATTACAGGAGAT +
Preference number: 5 (lower is better)
Translates to: PGIRGSCFSSCTHVQ*AGGSAQLLHLITGD
Trigger: ATCTCCTGTAATGAGGTGAAGCAGTTGCGCAGAGCCGCCCGCCCACTGCACGTGGGTGCAGCTTGAGAAGCAGGATCCACGTATGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565863.1
CDS-3UTR CAA 90 bp CTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTCACGGTCATGGGGAGCTTTACTGTaGAAGTCTGTTCTGCACCAT +
Preference number: 5 (lower is better)
Translates to: LGSPTSAVREGSLWPSRSWGALL*KSVLHH
Trigger: ATGGTGCAGAACAGACTTCAACAGTAAAGCTCCCCA...TGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp CTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTCACGGTCACTGTCATCCAAGCAATaGGAGTCCCCATACAGTACA +
Preference number: 5 (lower is better)
Translates to: LGSPTSAVREGSLWPSRSLSSKQ*ESPYST
Trigger: TGTACTGTATGGGGACTCCAATTGCTTGGATGACAG...TGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp CCGAGTCTTTGGTGCGCACAGCTGCCGGCGGGAAGTCTCACTGGCGGCAGAGCCCTTGGCCTTGTTGATTaGTACCACAAAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: PSLWCAQLPAGSLTGGRALGLVD*YHKEGQ
Trigger: CTGGCCTTCTTTGTGGTACAAATCAACAAGGCCAAG...GGCTCTGCCGCCAGTGAGACTTCCCGCCGGCAGCTGTGCGCACCAAAGACTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp GCTTCACCCTGGGCTTCCTCCGCTTCGGCCTGCTCTTGGCCTTGTTaGTTTGTACCACAAAGAAGGCCAGGACCACCATGGCTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: ASPWASSASACSWPC*FVPQRRPGPPWLPG
Trigger: TCCTGGGAGCCATGGTGGTCCTGGCCTTCTTTGTGGTACAAATCAACAAGGCCAAGAGCAGGCCGAAGCGGAGGAAGCCCAGGGTGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS TCA 90 bp TTCCAGGTGGTCAGCACCACTGTCCACCAGGTTGCACCAACTGCCTaGGTGCCACACTCAGCTCCTCATGGATGGGGGCAGAATGGAGCT +
Preference number: 5 (lower is better)
Translates to: FQVVSTTVHQVAPTA*VPHSAPHGWGQNGA
Trigger: AGCTCCATTCTGCCCCCATCCATGAGGAGCTGAGTGTGGCACTCAGGCAGTTGGTGCAACCTGGTGGACAGTGGTGCTGACCACCTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 90 bp GCGCACACAAACTGGCCCCACTTGCTGGCAGGCACAGCCACTGGCTaGAGTAGCATCATGTTCAGCTGGATCCAATTCCCTCCCCAAGGC +
Preference number: 5 (lower is better)
Translates to: AHTNWPHLLAGTATG*SSIMFSWIQFPPQG
Trigger: GCCTTGGGGAGGGAATTGGATCCAGCTGAACATGATGCTACTTCAGCCAGTGGCTGTGCCTGCCAGCAAGTGGGGCCAGTTTGTGTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS GCA 90 bp ATCCTGCTTCTCAAGCTGCACCCACGTGCAGTGGGCGGGCGGCTCTaGGCAACTGCTTCACCTCATTACAGGAGATGCCAGCCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: ILLLKLHPRAVGGRL*ATASPHYRRCQPFS
Trigger: TGAGAAAGGCTGGCATCTCCTGTAATGAGGTGAAGCAGTTGCGCAGAGCCGCCCGCCCACTGCACGTGGGTGCAGCTTGAGAAGCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565863.1
CDS CCA 90 bp CTTGCTTACAGCGCTGCCCTAGGCTGGCATCTGGGAACTTGGCTCTaGAATGCTCCTGCACAGATAAGGCCTCTGTGCCAGCCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: LAYSAALGWHLGTWL*NAPAQIRPLCQPAV
Trigger: GACAGCAGGCTGGCACAGAGGCCTTATCTGTGCAGGAGCATTCCAGAGCCAAGTTCCCAGATGCCAGCCTAGGGCAGCGCTGTAAGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS-3UTR CAA 90 bp CTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCGAGCTTGCCGTGGCCTaGCTCAAACATGTTGACCCC +
Preference number: 5 (lower is better)
Translates to: LETGSLLNQPPPQLGSPTELAVA*LKHVDP
Trigger: GGGGTCAACATGTTTGAGCAAGGCCACGGCAAGCTC...GGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp ATGCACAACCTGGGGCCACAACACCAGCAAGTAGAACAGCTGGGCTaGGAACTCAGGTGGTCAGCCTGGCTCCAGAGGCCACACTCTTCA +
Preference number: 5 (lower is better)
Translates to: MHNLGPQHQQVEQLG*ELRWSAWLQRPHSS
Trigger: TGAAGAGTGTGGCCTCTGGAGCCAGGCTGACCACCTGAGTTCTCAGCCCAGCTGTTCTACTTGCTGGTGTTGTGGCCCCAGGTTGTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564444.1
CDS TCA 90 bp AGGGAGGACGCTGACACTTCCACAGCTGCCCTAGGTATGGGCACCTaGTGCCAACGAAGAAGCCCAAAGCGCCTCTCCACTTCACAGATG +
Preference number: 5 (lower is better)
Translates to: REDADTSTAALGMGT*CQRRSPKRLSTSQM
Trigger: CATCTGTGAAGTGGAGAGGCGCTTTGGGCTTCTTCGTTGGCATCAGGTGCCCATACCTAGGGCAGCTGTGGAAGTGTCAGCGTCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS TCA 90 bp TACACATGTCAATGCAGCTTGCTGCTAGGAAAGGGGCCAGCTCTGTaGGACCCTGCCTGGCAGGAGAGAGGGGAGAGCTTAGGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: YTCQCSLLLGKGPAL*DPAWQERGESLGSC
Trigger: GCAGCTTCCTAAGCTCTCCCCTCTCTCCTGCCAGGCAGGGTCTCACAGAGCTGGCCCCTTTCCTAGCAGCAAGCTGCATTGACATGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS GCA 90 bp CTTACATTAGCACCTGTATATCCCATCTGCCAGAGCACATCTGCCTaGAGTGTCTGGGCAACCTGGCGCGGGATGGCTCTCAGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: LTLAPVYPICQSTSA*SVWATWRGMALSSR
Trigger: ACGGCTGCTGAGAGCCATCCCGCGCCAGGTTGCCCAGACACTGCAGGCAGATGTGCTCTGGCAGATGGGATATACAGGTGCTAATGTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 90 bp ATCTGGAGCAAATCCTTGGCACTCCCTCATGCTGGCTATCACACCTaGCACGAATGTGCCATGGCCCAACCCATCGTCCAGCGTTCGCTC +
Preference number: 5 (lower is better)
Translates to: IWSKSLALPHAGYHT*HECAMAQPIVQRSL
Trigger: GAGCGAACGCTGGACGATGGGTTGGGCCATGGCACATTCGTGGCAGGTGTGATAGCCAGCATGAGGGAGTGCCAAGGATTTGCTCCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 90 bp AGGTGGTCAGCACCACTGTCCACCAGGTTGCACCAACTGCCTGAGTaGCACACTCAGCTCCTCATGGATGGGGGCAGAATGGAGCTCATT +
Preference number: 5 (lower is better)
Translates to: RWSAPLSTRLHQLPE*HTQLLMDGGRMELI
Trigger: AATGAGCTCCATTCTGCCCCCATCCATGAGGAGCTGAGTGTGGCACTCAGGCAGTTGGTGCAACCTGGTGGACAGTGGTGCTGACCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS GCA 90 bp TCTCAAGCTGCACCCACGTGCAGTGGGCGGGCGGCTCTGCGCAACTaGTTCACCTCATTACAGGAGATGCCAGCCTTTCTCAAACAGCAA +
Preference number: 5 (lower is better)
Translates to: SQAAPTCSGRAALRN*FTSLQEMPAFLKQQ
Trigger: TTGCTGTTTGAGAAAGGCTGGCATCTCCTGTAATGAGGTGAAGCAGTTGCGCAGAGCCGCCCGCCCACTGCACGTGGGTGCAGCTTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565863.1
CDS GCA 90 bp CGCTGCCCTAGGCTGGCATCTGGGAACTTGGCTCTGGAATGCTCCTaGACAGATAAGGCCTCTGTGCCAGCCTGCTGTCTATACAGACAG +
Preference number: 5 (lower is better)
Translates to: RCPRLASGNLALECS*TDKASVPACCLYRQ
Trigger: CTGTCTGTATAGACAGCAGGCTGGCACAGAGGCCTTATCTGTGCAGGAGCATTCCAGAGCCAAGTTCCCAGATGCCAGCCTAGGGCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CCA 90 bp AGGGAGAGGCTGGCTCTTCGCAGGGGACGTGATGATTGCCACTTCTaGCTCCACCGGGTTTCATTGCAGGGTACTGTGGGGTCAGATTCA +
Preference number: 5 (lower is better)
Translates to: RERLALRRGRDDCHF*LHRVSLQGTVGSDS
Trigger: TGAATCTGACCCCACAGTACCCTGCAATGAAACCCGGTGGAGCCAGAAGTGGCAATCATCACGTCCCCTGCGAAGAGCCAGCCTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp GCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCTGACGGGATCCACAACGAAAGACTTTTCGTaGGGGCGTGACCCGTTTGAT +
Preference number: 5 (lower is better)
Translates to: AGSLTGGRATKSLLTGSTTKDFS*GRDPFD
Trigger: ATCAAACGGGTCACGCCCCAACGAAAAGTCTTTCGT...TGTGGATCCCGTCAGGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp CTGCAGTCAGAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCTGAGCAGATCGAGCTaGCCGTGGCCTTGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LQSEDPRQPFQFSRVFGALSRSS*PWPCSN
Trigger: GTTTGAGCAAGGCCACGGCAAGCTCGATCTGCTCAG...CGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTCTGACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp CTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCGGCTCACCCACCAGCTGGGGCTCAAACTaGCCTGTGGCTTGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: LETGSLLNQPPPQLGSPTSWGSN*PVACSC
Trigger: ACAGCTACAAGCCACAGGCAAGTTTGAGCCCCAGCT...GGTGGGTGAGCCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp CACAACACAGCACAGAGCCCCTGTGCTCTATTAAGCTATCCTCCATaGGCCGCAGGAGCCACGCCTGATTGGTTCCTCCCGGACAATGTG +
Preference number: 5 (lower is better)
Translates to: HNTAQSPCALLSYPP*AAGATPDWFLPDNV
Trigger: CACATTGTCCGGGAGGAACCAATCAGGCGTGGCTCCTGCGGCTCATGGAGGATAGCTTAATAGAGCACAGGGGCTCTGTGCTGTGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS GCA 90 bp GCCATTACGAAAACCACTCAGCGGCGCACACAAACTGGCCCCACTTaGTGGCAGGCACAGCCACTGGCTGAAGTAGCATCATGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: AITKTTQRRTQTGPT*WQAQPLAEVASCSA
Trigger: AGCTGAACATGATGCTACTTCAGCCAGTGGCTGTGCCTGCCAGCAAGTGGGGCCAGTTTGTGTGCGCCGCTGAGTGGTTTTCGTAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS GCA 90 bp TTACAGCGCTGCCCTAGGCTGGCATCTGGGAACTTGGCTCTGGAATaGTCCTGCACAGATAAGGCCTCTGTGCCAGCCTGCTGTCTATAC +
Preference number: 5 (lower is better)
Translates to: LQRCPRLASGNLALE*SCTDKASVPACCLY
Trigger: GTATAGACAGCAGGCTGGCACAGAGGCCTTATCTGTGCAGGAGCATTCCAGAGCCAAGTTCCCAGATGCCAGCCTAGGGCAGCGCTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CCA 90 bp GTTTCCAAAGGTTACTGGGCGCCGTCTCGTTTAAAGGCTGTGGCTTaGCCCAAGACAAGCGTGGACAGGCTGGTAGAGGCCGAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: VSKGYWAPSRLKAVA*PKTSVDRLVEAEVL
Trigger: CAAAACCTCGGCCTCTACCAGCCTGTCCACGCTTGTCTTGGGCCAAGCCACAGCCTTTAAACGAGACGGCGCCCAGTAACCTTTGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000570064.5
CDS CCA 90 bp CCACCAGGTTGCACCAACTGCCTGAGTGCCACACTCAGCTCCTCATaGATGGGGGCAGAATGGAGCTCATTCAGAGACAGTGAGACCATG +
Preference number: 5 (lower is better)
Translates to: PPGCTNCLSATLSSS*MGAEWSSFRDSETM
Trigger: CATGGTCTCACTGTCTCTGAATGAGCTCCATTCTGCCCCCATCCATGAGGAGCTGAGTGTGGCACTCAGGCAGTTGGTGCAACCTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS CCA 90 bp GACCCTGCCTGGCAGGAGAGAGGGGAGAGCTTAGGAAGCTGCGCCTaGATTTCTCCAGGCTTTCTCCGTGTGAGGCATCTTTTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: DPAWQERGESLGSCA*ISPGFLRVRHLFPL
Trigger: TAAGGGAAAAAGATGCCTCACACGGAGAAAGCCTGGAGAAATCCAGGCGCAGCTTCCTAAGCTCTCCCCTCTCTCCTGCCAGGCAGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CCA 90 bp GCAGACCTAGCTTCAGAAGGGCTTGCTTACAGCGCTGCCCTAGGCTaGCATCTGGGAACTTGGCTCTGGAATGCTCCTGCACAGATAAGG +
Preference number: 5 (lower is better)
Translates to: ADLASEGLAYSAALG*HLGTWLWNAPAQIR
Trigger: CCTTATCTGTGCAGGAGCATTCCAGAGCCAAGTTCCCAGATGCCAGCCTAGGGCAGCGCTGTAAGCAAGCCCTTCTGAAGCTAGGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS-3UTR CAA 90 bp ACTTGCCTGTGGCTTGTAGCTGTTGAGGATCTGATAGGCTCTGAGCAGATCGAGCCTTGCTCAAACATGTaGACCCCGGGGAGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: TCLWLVAVEDLIGSEQIEPCSNM*TPGSLR
Trigger: CCGGAGGCTCCCCGGGGTCAACATGTTTGAGCAAGG...CTCGATCTGCTCAGAGCCTATCAGATCCTCAACAGCTACAAGCCACAGGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR CAA 90 bp AGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTGCCGTTGGGTAACACCACCTaGTCCAGGTCAATGGAGAGT +
Preference number: 5 (lower is better)
Translates to: RPQTAFPVLPSLWCAQLPLGNTT*SRSMES
Trigger: ACTCTCCATTGACCTGGACAAGGTGGTGTTACCCAA...CGGCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp TGCAGTCAGAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCCGCTTCGGCCTGCTCTaGGCCTTGTTGATTTGTACC +
Preference number: 5 (lower is better)
Translates to: CSQKTPDSLSSSPESLVRRFGLL*ALLICT
Trigger: GGTACAAATCAACAAGGCCAAGAGCAGGCCGAAGCG...GCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTCTGACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 90 bp AACTCTTACATTAGCACCTGTATATCCCATCTGCCAGAGCACATCTaGCTGCAGTGTCTGGGCAACCTGGCGCGGGATGGCTCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: NSYISTCISHLPEHI*LQCLGNLARDGSQQ
Trigger: CTGCTGAGAGCCATCCCGCGCCAGGTTGCCCAGACACTGCAGGCAGATGTGCTCTGGCAGATGGGATATACAGGTGCTAATGTAAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 90 bp CTGGGAACTTGGCTCTGGAATGCTCCTGCACAGATAAGGCCTCTGTaGCAGCCTGCTGTCTATACAGACAGTGTGATGTGCAGGGACACC +
Preference number: 5 (lower is better)
Translates to: LGTWLWNAPAQIRPL*QPAVYTDSVMCRDT
Trigger: GGTGTCCCTGCACATCACACTGTCTGTATAGACAGCAGGCTGGCACAGAGGCCTTATCTGTGCAGGAGCATTCCAGAGCCAAGTTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CCA 90 bp ATCGCTGAACCCCATGTTCCACACAGACAGCAGCTCATTCAGAGCTaGGATGTTAGCTCCTCCGGTATCCGGCATCCACCACTGCCTTGT +
Preference number: 5 (lower is better)
Translates to: IAEPHVPHRQQLIQS*DVSSSGIRHPPLPC
Trigger: ACAAGGCAGTGGTGGATGCCGGATACCGGAGGAGCTAACATCCCAGCTCTGAATGAGCTGCTGTCTGTGTGGAACATGGGGTTCAGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS CCA 90 bp CAGGTCTACGAGAGCAGATGCACTGAGAAGAGCCGGCATCACTTCTaGGAGGTTCCTGACAAAGATGCACAACCTGGGGCCACAACACCA +
Preference number: 5 (lower is better)
Translates to: QVYESRCTEKSRHHF*EVPDKDAQPGATTP
Trigger: TGGTGTTGTGGCCCCAGGTTGTGCATCTTTGTCAGGAACCTCCCAGAAGTGATGCCGGCTCTTCTCAGTGCATCTGCTCTCGTAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564444.1
CDS CCA 90 bp ATTACGAAAACCACTCAGCGGCGCACACAAACTGGCCCCACTTGCTaGCAGGCACAGCCACTGGCTGAAGTAGCATCATGTTCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: ITKTTQRRTQTGPTC*QAQPLAEVASCSAG
Trigger: TCCAGCTGAACATGATGCTACTTCAGCCAGTGGCTGTGCCTGCCAGCAAGTGGGGCCAGTTTGTGTGCGCCGCTGAGTGGTTTTCGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS CCA 90 bp GGCCAATACAACTTAGACCCGAAGAAGACAGAGAGGTTGATACGCTaGCAACAGCAGCACAGAGCTTGGGAGGACACCGGAGCTAGAGCG +
Preference number: 5 (lower is better)
Translates to: GQYNLDPKKTERLIR*QQQHRAWEDTGARA
Trigger: CGCTCTAGCTCCGGTGTCCTCCCAAGCTCTGTGCTGCTGTTGCCAGCGTATCAACCTCTCTGTCTTCTTCGGGTCTAAGTTGTATTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS-3UTR CAA 90 bp CTCGGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTGGCCCTCACGGTCAAGCCATCTTACAGTCTaGCCCAACATAAATAAAAGT +
Preference number: 5 (lower is better)
Translates to: LGSPTSAVREGSLWPSRSSHLTV*PNINKS
Trigger: ACTTTTATTTATGTTGGGCAAGACTGTAAGATGGCT...TGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp AGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTGCCGAGAAGCAGCCAGATGTaGACAAGCTTCATGGTCACA +
Preference number: 5 (lower is better)
Translates to: RPQTAFPVLPSLWCAQLPRSSQM*TSFMVT
Trigger: TGTGACCATGAAGCTTGTCAACATCTGGCTGCTTCT...CGGCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp AGAGCCACTAAGTCCCTCCTGACGGGATCCACAGGAATCTTCTCGATGTACCAGCTCCACCGGGTTTCATaGCAGGGTACTGTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: RATKSLLTGSTGIFSMYQLHRVS*QGTVGS
Trigger: TGACCCCACAGTACCCTGCAATGAAACCCGGTGGAG...CTGGTACATCGAGAAGATTCCTGTGGATCCCGTCAGGAGGGACTTAGTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp GCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCTGACGGGATCCACACTGCTCTTGGCCTTGTaGATTTGTACCACAAAGAAG +
Preference number: 5 (lower is better)
Translates to: AGSLTGGRATKSLLTGSTLLLAL*ICTTKK
Trigger: CTTCTTTGTGGTACAAATCAACAAGGCCAAGAGCAG...TGTGGATCCCGTCAGGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp GGAGATGTGAAATGCCATTTGCGTCCACGGCCACCTAAATGCCACTaGCAGCAACTATGGTGGCCGTTTCCACGTCCCGAGGGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: GDVKCHLRPRPPKCH*QQLWWPFPRPEGER
Trigger: TCTTTCTCCCTCGGGACGTGGAAACGGCCACCATAGTTGCTGTCAGTGGCATTTAGGTGGCCGTGGACGCAAATGGCATTTCACATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS GCA 90 bp CTGAGAGGGGACAGTGAGGTAATCCATGGGAGCATCCCAGCCTGCTaGATGGGACCTGGCAAGTGCTCTAGAATGTTGGTGATTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LRGDSEVIHGSIPAC*MGPGKCSRMLVILP
Trigger: AGGAAGAATCACCAACATTCTAGAGCACTTGCCAGGTCCCATGCAGCAGGCTGGGATGCTCCCATGGATTACCTCACTGTCCCCTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS CCA 90 bp TGTGAAGTTCTGCATCTGGAGCAAATCCTTGGCACTCCCTCATGCTaGCTATCACACCTGCCACGAATGTGCCATGGCCCAACCCATCGT +
Preference number: 5 (lower is better)
Translates to: CEVLHLEQILGTPSC*LSHLPRMCHGPTHR
Trigger: ACGATGGGTTGGGCCATGGCACATTCGTGGCAGGTGTGATAGCCAGCATGAGGGAGTGCCAAGGATTTGCTCCAGATGCAGAACTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS CCA 90 bp AAGAAGACAGAGAGGTTGATACGCTGGCAACAGCAGCACAGAGCTTaGGAGGACACCGGAGCTAGAGCGAAGAGCGCGATGGGAAAAACA +
Preference number: 5 (lower is better)
Translates to: KKTERLIRWQQQHRA*EDTGARAKSAMGKT
Trigger: TGTTTTTCCCATCGCGCTCTTCGCTCTAGCTCCGGTGTCCTCCCAAGCTCTGTGCTGCTGTTGCCAGCGTATCAACCTCTCTGTCTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS-3UTR CAA 90 bp TGTGACTCCCATGCCGTTGAGGATGGTGACATTAACAACTGTCGGCATTCCTCCCTGAGCAGATCGAGCTaGCCGTGGCCTTGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: CDSHAVEDGDINNCRHSSLSRSS*PWPCSN
Trigger: GTTTGAGCAAGGCCACGGCAAGCTCGATCTGCTCAG...GGAGGAATGCCGACAGTTGTTAATGTCACCATCCTCAACGGCATGGGAGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS TCA 90 bp AGTCCTGTACTCCATTTGTACCACAGAACCAACGTCCAATGGGGTTaGTCAATCAACCACTGTGAGCCAATCTGCGCCGCCGGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: SPVLHLYHRTNVQWG*SINHCEPICAAGSS
Trigger: TGAGCTCCCGGCGGCGCAGATTGGCTCACAGTGGTTGATTGATCAACCCCATTGGACGTTGGTTCTGTGGTACAAATGGAGTACAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp GAAGATGGGCAGATGTGTGCACAGCACTGGCTGGTCAAACTTTGCTaGCCACCACTGACACACGCAAGGCTACACCTGCGAAATCTAAGC +
Preference number: 5 (lower is better)
Translates to: EDGQMCAQHWLVKLC*PPLTHARLHLRNLS
Trigger: GCTTAGATTTCGCAGGTGTAGCCTTGCGTGTGTCAGTGGTGGTCAGCAAAGTTTGACCAGCCAGTGCTGTGCACACATCTGCCCATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 90 bp CTGTGCTCTATTAAGCTATCCTCCATGAGCCGCAGGAGCCACGCCTaGTTGGTTCCTCCCGGACAATGTGTGTTTCCATTGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LCSIKLSSMSRRSHA*LVPPGQCVFPLLKV
Trigger: CACCTTCAGCAATGGAAACACACATTGTCCGGGAGGAACCAATCAGGCGTGGCTCCTGCGGCTCATGGAGGATAGCTTAATAGAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 90 bp TGGGCAAGTGAAAGCAAAGACGTCCAGTCCTATCAGCAATTAGGCTaGAAGTCAACGCCAAGCTGGCGGGCAAGGGCTGGTCTGAGTAGA +
Preference number: 5 (lower is better)
Translates to: WASESKDVQSYQQLG*KSTPSWRARAGLSR
Trigger: TCTACTCAGACCAGCCCTTGCCCGCCAGCTTGGCGTTGACTTTCAGCCTAATTGCTGATAGGACTGGACGTCTTTGCTTTCACTTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS TCA 90 bp GTACCACAGAACCAACGTCCAATGGGGTTGATCAATCAACCACTGTaGGCCAATCTGGGGCCACAACACCAGCAAGTAGAACAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VPQNQRPMGLINQPL*ANLGPQHQQVEQLG
Trigger: GCCCAGCTGTTCTACTTGCTGGTGTTGTGGCCCCAGATTGGCTCACAGTGGTTGATTGATCAACCCCATTGGACGTTGGTTCTGTGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567557.1
ENST00000569907.5
CDS GCA 90 bp CCCCATCTGCCTTGCCTGCAGGCGGGGGACGATCAAATGAACGTGTaGGATTCCTGCACTCTGTGGTGCACAGTATCATTATTAACTCTG +
Preference number: 5 (lower is better)
Translates to: PHLPCLQAGDDQMNV*DSCTLWCTVSLLTL
Trigger: CAGAGTTAATAATGATACTGTGCACCACAGAGTGCAGGAATCGCACACGTTCATTTGATCGTCCCCCGCCTGCAGGCAAGGCAGATGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS GCA 90 bp TTGGCTCTGGAATGCTCCTGCACAGATAAGGCCTCTGTGCCAGCCTaGTGTCTATACAGACAGTGTGATGTGCAGGGACACCTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LALECSCTDKASVPA*CLYRQCDVQGHLCF
Trigger: AAAGCAGAGGTGTCCCTGCACATCACACTGTCTGTATAGACAGCAGGCTGGCACAGAGGCCTTATCTGTGCAGGAGCATTCCAGAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CCA 90 bp GAAGCCAAAAGCAGTCCTTCTGTCGGTGACTGTCATCCAAGCAATTaGAGTCCCCATACAGTACAATCCGGCCTCCACCCTCAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: EAKSSPSVGDCHPSN*SPHTVQSGLHPQLE
Trigger: TTCCAGCTGAGGGTGGAGGCCGGATTGTACTGTATGGGGACTCCAATTGCTTGGATGACAGTCACCGACAGAAGGACTGCTTTTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS CCA 90 bp CTCCAGGGGACAAGGGCCTCACTTGAGGGCGATTCGATCGAAAGTTaGGTAACACCACCTTGTCCAGGTCAATGGAGAGTAGCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: LQGTRASLEGDSIES*VTPPCPGQWRVASD
Trigger: ATCAGAAGCTACTCTCCATTGACCTGGACAAGGTGGTGTTACCCAACTTTCGATCGAATCGCCCTCAAGTGAGGCCCTTGTCCCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS CCA 90 bp AGCACAGAGCTTGGGAGGACACCGGAGCTAGAGCGAAGAGCGCGATaGGAAAAACACTACTCTGGCTTAAGTGAGGGGGAAGAATACAGT +
Preference number: 5 (lower is better)
Translates to: STELGRTPELERRAR*EKHYSGLSEGEEYS
Trigger: ACTGTATTCTTCCCCCTCACTTAAGCCAGAGTAGTGTTTTTCCCATCGCGCTCTTCGCTCTAGCTCCGGTGTCCTCCCAAGCTCTGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS-3UTR CAA 90 bp GACTCCCATGCCGTTGAGGATGGTGACATTAACAACTGTCGGCATTCCTCCATAGAGCTTGCCGTGGCCTaGCTCAAACATGTTGACCCC +
Preference number: 5 (lower is better)
Translates to: DSHAVEDGDINNCRHSSIELAVA*LKHVDP
Trigger: GGGGTCAACATGTTTGAGCAAGGCCACGGCAAGCTC...TATGGAGGAATGCCGACAGTTGTTAATGTCACCATCCTCAACGGCATGGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR CAA 90 bp TGCCTGTGGCTTGTAGCTGTTGAGGATCTGATAGGCTCTGAGCAGATCGAGCTTAGCTGGGGCTCAAACTaGCCTGTGGCTTGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: CLWLVAVEDLIGSEQIELSWGSN*PVACSC
Trigger: ACAGCTACAAGCCACAGGCAAGTTTGAGCCCCAGCT...AAGCTCGATCTGCTCAGAGCCTATCAGATCCTCAACAGCTACAAGCCACAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR CAA 90 bp GACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCGGACAAGGGCCTCACTaGAGGGCGATTCGATCGAAA +
Preference number: 5 (lower is better)
Translates to: DSNKPAAGNWIPFKPAATGQGPH*RAIRSK
Trigger: TTTCGATCGAATCGCCCTCAAGTGAGGCCCTTGTCC...GGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp GCGGGAAGTCTCACTGGCGGCAGAGCCACTAAGTCCCTCCTGACGGGATCCACATTAGCTTGGTCAGGGTaGTATCATTTGTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: AGSLTGGRATKSLLTGSTLAWSG*YHLFGK
Trigger: CTTTCCAAACAAATGATACAACCCTGACCAAGCTAA...TGTGGATCCCGTCAGGAGGGACTTAGTGGCTCTGCCGCCAGTGAGACTTCCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 90 bp AAATGTGAAGTTCTGCATCTGGAGCAAATCCTTGGCACTCCCTCATaGTGGCTATCACACCTGCCACGAATGTGCCATGGCCCAACCCAT +
Preference number: 5 (lower is better)
Translates to: KCEVLHLEQILGTPS*WLSHLPRMCHGPTH
Trigger: ATGGGTTGGGCCATGGCACATTCGTGGCAGGTGTGATAGCCAGCATGAGGGAGTGCCAAGGATTTGCTCCAGATGCAGAACTTCACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 90 bp AAATGTGAAGTTCTGCATCTGGAGCAAATCCTTGGCACTCCCTCATaGTGGCTATCACACCTGCCACGAATGTGCCATGGCCCAACCCAA +
Preference number: 5 (lower is better)
Translates to: KCEVLHLEQILGTPS*WLSHLPRMCHGPTQ
Trigger: TTGGGTTGGGCCATGGCACATTCGTGGCAGGTGTGATAGCCAGCATGAGGGAGTGCCAAGGATTTGCTCCAGATGCAGAACTTCACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570012.1
CDS GCA 90 bp ATAAGGCCTCTGTGCCAGCCTGCTGTCTATACAGACAGTGTGATGTaGAGGGACACCTCTGCTTTTGCAAGTCTGGAGCTTTGGGAGTTG +
Preference number: 5 (lower is better)
Translates to: IRPLCQPAVYTDSVM*RDTSAFASLELWEL
Trigger: CAACTCCCAAAGCTCCAGACTTGCAAAAGCAGAGGTGTCCCTGCACATCACACTGTCTGTATAGACAGCAGGCTGGCACAGAGGCCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CCA 90 bp GTAGAGGCCGAGGTTTTGGGTCTCCCAAATGGGCCTCCAGAACCTTaGAGTACCGATGAAGATGGTTTCCTGTGGTTAGCAGCAACATCA +
Preference number: 5 (lower is better)
Translates to: VEAEVLGLPNGPPEP*STDEDGFLWLAATS
Trigger: TGATGTTGCTGCTAACCACAGGAAACCATCTTCATCGGTACTCCAAGGTTCTGGAGGCCCATTTGGGAGACCCAAAACCTCGGCCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561936.1
ENST00000562886.1
CDS CCA 90 bp ACTTCACAGATGGAAGCCTGCCCCCAGCACTGGGCTGACAGCATCTaGAGCTGTCTCCTGGTCTCAAATCTCTTTTGGAGACTCAGAATA +
Preference number: 5 (lower is better)
Translates to: TSQMEACPQHWADSI*SCLLVSNLFWRLRI
Trigger: TATTCTGAGTCTCCAAAAGAGATTTGAGACCAGGAGACAGCTCCAGATGCTGTCAGCCCAGTGCTGGGGGCAGGCTTCCATCTGTGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS-3UTR CAA 90 bp GAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCACAGCTGCTCCAATCACATCCATTaGATCAGCAGGGTTATTCAG +
Preference number: 5 (lower is better)
Translates to: EDPRQPFQFSRVFGAHSCSNHIH*ISRVIQ
Trigger: CTGAATAACCCTGCTGATCAAATGGATGTGATTGGA...GCAGCTGTGCGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp ACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCGTTCTGCACCATTTTTaGACTCTGTCTCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TNLQLETGSLLNQPPPQLVLHHF*TLSLLG
Trigger: CCCCAGCAGAGACAGAGTCAAAAAATGGTGCAGAAC...GAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp TTAGTATCCAACAGGTGCTTGTCTGGCACAGCCTGCATGAGAGAATaGGTGCACACTCATCTCTGTACCCAATCCAGGACTGACCACTCC +
Preference number: 5 (lower is better)
Translates to: LVSNRCLSGTACMRE*VHTHLCTQSRTDHS
Trigger: GGAGTGGTCAGTCCTGGATTGGGTACAGAGATGAGTGTGCACTCATTCTCTCATGCAGGCTGTGCCAGACAAGCACCTGTTGGATACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564643.1
CDS TCA 90 bp AGTCCTGTACTCCATTTGTACCACAGAACCAACGTCCAATGGGGTTaGTCAATCAACCACTGTGAGCCAATCTGGGGCCACAACACCAGC +
Preference number: 5 (lower is better)
Translates to: SPVLHLYHRTNVQWG*SINHCEPIWGHNTS
Trigger: GCTGGTGTTGTGGCCCCAGATTGGCTCACAGTGGTTGATTGATCAACCCCATTGGACGTTGGTTCTGTGGTACAAATGGAGTACAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567557.1
ENST00000569907.5
CDS GCA 90 bp CCTTGCCTGCAGGCGGGGGACGATCAAATGAACGTGTGCGATTCCTaGACTCTGTGGTGCACAGTATCATTATTAACTCTGGGATCTGAA +
Preference number: 5 (lower is better)
Translates to: PCLQAGDDQMNVCDS*TLWCTVSLLTLGSE
Trigger: TTCAGATCCCAGAGTTAATAATGATACTGTGCACCACAGAGTGCAGGAATCGCACACGTTCATTTGATCGTCCCCCGCCTGCAGGCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CCA 90 bp GGCGATTCGATCGAAAGTTGGGTAACACCACCTTGTCCAGGTCAATaGAGAGTAGCTTCTGATGTTTCCAAAGGTTACTGGGCGCCGTCT +
Preference number: 5 (lower is better)
Translates to: GDSIESWVTPPCPGQ*RVASDVSKGYWAPS
Trigger: AGACGGCGCCCAGTAACCTTTGGAAACATCAGAAGCTACTCTCCATTGACCTGGACAAGGTGGTGTTACCCAACTTTCGATCGAATCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000570064.5
CDS CCA 90 bp CAGTCGGAGGCAATGGTGATTCCAGAACCACTGCATATAAGGAAGTaGGCAAACTGGTGCCGGGAACCAGACAGCATCTTTGTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: QSEAMVIPEPLHIRK*ANWCREPDSIFVSE
Trigger: TTCAGAGACAAAGATGCTGTCTGGTTCCCGGCACCAGTTTGCCCACTTCCTTATATGCAGTGGTTCTGGAATCACCATTGCCTCCGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CCA 90 bp GACCGAGGAGTAGGAGAAGGCAACTTCAATGTTGTCTCCGTTCTGTaGCAAATAGGGCTGCCAGTCAGGCTGGAGGAACATTTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: DRGVGEGNFNVVSVL*QIGLPVRLEEHFAE
Trigger: TTCAGCAAAATGTTCCTCCAGCCTGACTGGCAGCCCTATTTGCCACAGAACGGAGACAACATTGAAGTTGCCTTCTCCTACTCCTCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568051.1
CDS CCA 90 bp AGTGTGATGTGCAGGGACACCTCTGCTTTTGCAAGTCTGGAGCTTTaGGAGTTGTCACTGGCAGAGAATGAGTACGTGACCAGCCCTAAT +
Preference number: 5 (lower is better)
Translates to: SVMCRDTSAFASLEL*ELSLAENEYVTSPN
Trigger: ATTAGGGCTGGTCACGTACTCATTCTCTGCCAGTGACAACTCCCAAAGCTCCAGACTTGCAAAAGCAGAGGTGTCCCTGCACATCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS-3UTR CAA 90 bp ACAAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCAAATCCCATGGCCTTTaGTGGTTCAGCCTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: TNLQLETGSLLNQPPPQLKSHGL*WFSLKR
Trigger: TCTCTTCAGGCTGAACCACAAAAGGCCATGGGATTT...GAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp GGGCAGGCCCATGTAGAACAGACTCTAACAAACCTGCAGCTGGAAACTGGATCCCTCTCCTTCACATTTTaGAAGTGGGGATGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: GQAHVEQTLTNLQLETGSLSFTF*KWGCFS
Trigger: CGAGAAGCATCCCCACTTCAAAAATGTGAAGGAGAG...GGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTCTGTTCTACATGGGCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp GATCTGATAGGCTCTGAGCAGATCGAGCTTGCCGTGGCCTTGCTCAAACATGTTGTGACTCCCATGCCGTaGAGGATGGTGACATTAACA +
Preference number: 5 (lower is better)
Translates to: DLIGSEQIELAVALLKHVVTPMP*RMVTLT
Trigger: TGTTAATGTCACCATCCTCAACGGCATGGGAGTCAC...AACATGTTTGAGCAAGGCCACGGCAAGCTCGATCTGCTCAGAGCCTATCAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR CAA 90 bp CTGCAGTCAGAAGACCCCAGACAGCCTTTCCAGTTCTCCCGAGTCTTTGGTGCGCTCATAACAGAAGTGTaGTACCAGTCACTGAAGATG +
Preference number: 5 (lower is better)
Translates to: LQSEDPRQPFQFSRVFGALITEV*YQSLKM
Trigger: CATCTTCAGTGACTGGTACAACACTTCTGTTATGAG...CGCACCAAAGACTCGGGAGAACTGGAAAGGCTGTCTGGGGTCTTCTGACTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp GTACCACAGAACCAACGTCCAATGGGGTTGATCAATCAACCACTGTaGGCCAATAGTGGAGAAGCTCCACCAAGTTGTCCAAGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: VPQNQRPMGLINQPL*ANSGEAPPSCPREA
Trigger: TGCTTCCCTTGGACAACTTGGTGGAGCTTCTCCACTATTGGCTCACAGTGGTTGATTGATCAACCCCATTGGACGTTGGTTCTGTGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564444.1
CDS TCA 90 bp GGGAATAATAACATCTATTTTCACAGGATTACTGAGAGGGGACAGTaGGGTAATCCATGGGAGCATCCCAGCCTGCTGCATGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: GNNNIYFHRITERGQ*GNPWEHPSLLHGTW
Trigger: CCAGGTCCCATGCAGCAGGCTGGGATGCTCCCATGGATTACCTCACTGTCCCCTCTCAGTAATCCTGTGAAAATAGATGTTATTATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 90 bp GCAAGAGAGAGACTCCCACTCGATACTCCCAGCTCGGCAACTGCCTaGATGCCAATGAGCACTCATTATAACCCGCCCTATTTTATAGGA +
Preference number: 5 (lower is better)
Translates to: ARERLPLDTPSSATA*MPMSTHYNPPYFIG
Trigger: TCCTATAAAATAGGGCGGGTTATAATGAGTGCTCATTGGCATTCAGGCAGTTGCCGAGCTGGGAGTATCGAGTGGGAGTCTCTCTCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS TCA 90 bp GTTCAACTGAAACTCAAGACAGAGCAAGTGATCTACGGGGAGATGTaGAATGCCATTTGCGTCCACGGCCACCTAAATGCCACTGACAGC +
Preference number: 5 (lower is better)
Translates to: VQLKLKTEQVIYGEM*NAICVHGHLNATDS
Trigger: GCTGTCAGTGGCATTTAGGTGGCCGTGGACGCAAATGGCATTTCACATCTCCCCGTAGATCACTTGCTCTGTCTTGAGTTTCAGTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS TCA 90 bp CATGAGAGAATGAGTGCACACTCATCTCTGTACCCAATCCAGGACTaGCCACTCCGCAACCTTCTACGGGACCCACTTATGCTAAATGCA +
Preference number: 5 (lower is better)
Translates to: HERMSAHSSLYPIQD*PLRNLLRDPLMLNA
Trigger: TGCATTTAGCATAAGTGGGTCCCGTAGAAGGTTGCGGAGTGGTCAGTCCTGGATTGGGTACAGAGATGAGTGTGCACTCATTCTCTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564643.1
CDS CCA 90 bp CACAAGAGGCCTGCAGTCTTGTTTAGTATCCAACAGGTGCTTGTCTaGCACAGCCTGCATGAGAGAATGAGTGCACACTCATCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: HKRPAVLFSIQQVLV*HSLHERMSAHSSLY
Trigger: GTACAGAGATGAGTGTGCACTCATTCTCTCATGCAGGCTGTGCCAGACAAGCACCTGTTGGATACTAAACAAGACTGCAGGCCTCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564643.1
CDS-3UTR CAA 90 bp TCCATAGTAGATGGGCTGGGAGCAGTAGGGCCACATGTAGGGACACTCAGTCAGTCCAATCACATCCATTaGATCAGCAGGGTTATTCAG +
Preference number: 5 (lower is better)
Translates to: SIVDGLGAVGPHVGTLSQSNHIH*ISRVIQ
Trigger: CTGAATAACCCTGCTGATCAAATGGATGTGATTGGA...CTGACTGAGTGTCCCTACATGTGGCCCTACTGCTCCCAGCCCATCTACTATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563231.5
CDS-3UTR CAA 90 bp TTGTTTGGAAAGTACATCCTTCCCCTGCAGTCAGAAGACCCCAGACAGCCTTTCGTGACTCCCATGCCGTaGAGGATGGTGACATTAACA +
Preference number: 5 (lower is better)
Translates to: LFGKYILPLQSEDPRQPFVTPMP*RMVTLT
Trigger: TGTTAATGTCACCATCCTCAACGGCATGGGAGTCAC...GAAAGGCTGTCTGGGGTCTTCTGACTGCAGGGGAAGGATGTACTTTCCAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp TTGTTTGGAAAGTACATCCTTCCCCTGCAGTCAGAAGACCCCAGACAGCCTTTCGGCCTGCTCTTGGCCTaGTTGATTTGTACCACAAAG +
Preference number: 5 (lower is better)
Translates to: LFGKYILPLQSEDPRQPFGLLLA*LICTTK
Trigger: CTTTGTGGTACAAATCAACAAGGCCAAGAGCAGGCC...GAAAGGCTGTCTGGGGTCTTCTGACTGCAGGGGAAGGATGTACTTTCCAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp ATTGGTTCCTCCCGGACAATGTGTGTTTCCATTGCTGAAGGTGGGTaGGAAAATCAGAACCGTTCCCTTGAAGATGGGCAGATGTGTGCA +
Preference number: 5 (lower is better)
Translates to: IGSSRTMCVSIAEGG*ENQNRSLEDGQMCA
Trigger: TGCACACATCTGCCCATCTTCAAGGGAACGGTTCTGATTTTCTCACCCACCTTCAGCAATGGAAACACACATTGTCCGGGAGGAACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 90 bp GAAGTGGGCAAACTGGTGCCGGGAACCAGACAGCATCTTTGTCTCTaGAGAAACCACTGTCTCCAGGGAGAATACGAAACATACAAGGAA +
Preference number: 5 (lower is better)
Translates to: EVGKLVPGTRQHLCL*RNHCLQGEYETYKE
Trigger: TTCCTTGTATGTTTCGTATTCTCCCTGGAGACAGTGGTTTCTTCAGAGACAAAGATGCTGTCTGGTTCCCGGCACCAGTTTGCCCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CCA 90 bp GACCGAGGAGTAGGAGAAGGCAACTTCAATGTTGTCTCCGTTCTGTaGCAAATAGGGCTGCCAGTCAGGCTTATCTACAATTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: DRGVGEGNFNVVSVL*QIGLPVRLIYNSSC
Trigger: ACAGGAAGAATTGTAGATAAGCCTGACTGGCAGCCCTATTTGCCACAGAACGGAGACAACATTGAAGTTGCCTTCTCCTACTCCTCGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS CCA 90 bp GCAATGGTGATTCCAGAACCACTGCATATAAGGAAGTGGGCAAACTaGTGCCGGGAACCAGACAGCATCTTTGTCTCTGAAGAAACCACT +
Preference number: 5 (lower is better)
Translates to: AMVIPEPLHIRKWAN*CREPDSIFVSEETT
Trigger: AGTGGTTTCTTCAGAGACAAAGATGCTGTCTGGTTCCCGGCACCAGTTTGCCCACTTCCTTATATGCAGTGGTTCTGGAATCACCATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CCA 90 bp ATCAGGGCCTGCTTCATACTGGCGGGATTCACCAGCTCACGCTTCTaGACTGTGCTGGAGGAAAAATCAAGAATTGCCTATTTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: IRACFILAGFTSSRF*TVLEEKSRIAYFLS
Trigger: TGAGAGAAAATAGGCAATTCTTGATTTTTCCTCCAGCACAGTCCAGAAGCGTGAGCTGGTGAATCCCGCCAGTATGAAGCAGGCCCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564643.1
CDS-3UTR CAA 90 bp AAACCTGCAGCTGGAAACTGGATCCCTTTTAAACCAGCCGCCACCACAGCTCGGTCAGATTCAGCATACTaGAGGGAACGAAAGACTTTT +
Preference number: 5 (lower is better)
Translates to: KPAAGNWIPFKPAATTARSDSAY*RERKTF
Trigger: AAAAGTCTTTCGTTCCCTCAAGTATGCTGAATCTGA...CCGAGCTGTGGTGGCGGCTGGTTTAAAAGGGATCCAGTTTCCAGCTGCAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp GGTTTTGGGTCTCCCAAATGGGCCTCCAGAACCTTGGAGTACCGATaGAGATGGTTTCCTGTGGTTAGCAGCAACATCAACAAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: GFGSPKWASRTLEYR*RWFPVVSSNINKKE
Trigger: TTCCTTTTTGTTGATGTTGCTGCTAACCACAGGAAACCATCTTCATCGGTACTCCAAGGTTCTGGAGGCCCATTTGGGAGACCCAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561936.1
ENST00000562886.1
CDS TCA 90 bp AGTCCTGTACTCCATTTGTACCACAGAACCAACGTCCAATGGGGTTaGTCAATCAACCACTGTGAGCCAATAGTGGAGAAGCTCCACCAA +
Preference number: 5 (lower is better)
Translates to: SPVLHLYHRTNVQWG*SINHCEPIVEKLHQ
Trigger: TTGGTGGAGCTTCTCCACTATTGGCTCACAGTGGTTGATTGATCAACCCCATTGGACGTTGGTTCTGTGGTACAAATGGAGTACAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564444.1
CDS GCA 90 bp GCGGGGGACGATCAAATGAACGTGTGCGATTCCTGCACTCTGTGGTaGACAGTATCATTATTAACTCTGGGATCTGAAAAACTCGTTCAG +
Preference number: 5 (lower is better)
Translates to: AGDDQMNVCDSCTLW*TVSLLTLGSEKLVQ
Trigger: CTGAACGAGTTTTTCAGATCCCAGAGTTAATAATGATACTGTGCACCACAGAGTGCAGGAATCGCACACGTTCATTTGATCGTCCCCCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CCA 90 bp CACCATTCCAGTCTAAAGGGTCATTCTTCATCCTTAAATTATCCCTaGGGAAATAGCCAGGTGGATAGCGGAGGTTGTGGTACTGATCCC +
Preference number: 5 (lower is better)
Translates to: HHSSLKGHSSSLNYP*GNSQVDSGGCGTDP
Trigger: GGGATCAGTACCACAACCTCCGCTATCCACCTGGCTATTTCCCCAGGGATAATTTAAGGATGAAGAATGACCCTTTAGACTGGAATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS CCA 90 bp CAGGCGGGGGACGATCAAATGAACGTGTGCGATTCCTGCACTCTGTaGTGCACAGTATCATTATTAACTCTGGGATCTGAAAAACTCGTT +
Preference number: 5 (lower is better)
Translates to: QAGDDQMNVCDSCTL*CTVSLLTLGSEKLV
Trigger: AACGAGTTTTTCAGATCCCAGAGTTAATAATGATACTGTGCACCACAGAGTGCAGGAATCGCACACGTTCATTTGATCGTCCCCCGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS-3UTR CAA 90 bp GGGCAGGCCCATGTAGAACAGACTCTAACAAACCTGCAGCTGGAAACTGGATCCCATATTCCACAACTGTaGATGAGAATTCCACCTTCA +
Preference number: 5 (lower is better)
Translates to: GQAHVEQTLTNLQLETGSHIPQL*MRIPPS
Trigger: TGAAGGTGGAATTCTCATCAACAGTTGTGGAATATG...GGATCCAGTTTCCAGCTGCAGGTTTGTTAGAGTCTGTTCTACATGGGCCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp AGAGCCACTAAGTCCCTCCTGACGGGATCCACAGGAATCTTCTCGATGTACCAGGGTATAATTCTCCAATaGTCTACTTCACTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: RATKSLLTGSTGIFSMYQGIILQ*STSLLF
Trigger: GAAGAGCAGTGAAGTAGACAATTGGAGAATTATACC...CTGGTACATCGAGAAGATTCCTGTGGATCCCGTCAGGAGGGACTTAGTGGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 90 bp AAAGTAAATCCAACATGTTCCAGATTCCCCTATTCTCATAAGACATaGATTCTCAGTGGCCCAGCCCAGCCAGATAAGCACACACAGCCA +
Preference number: 5 (lower is better)
Translates to: KVNPTCSRFPYSHKT*ILSGPAQPDKHTQP
Trigger: TGGCTGTGTGTGCTTATCTGGCTGGGCTGGGCCACTGAGAATGCATGTCTTATGAGAATAGGGGAATCTGGAACATGTTGGATTTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS CCA 90 bp TACCTGATTATTGGTAAAGACCCTGAAAATGTGAAGTTCTGCATCTaGAGCAAATCCTTGGCACTCCCTCATGCTGGCTATCACACCTGC +
Preference number: 5 (lower is better)
Translates to: YLIIGKDPENVKFCI*SKSLALPHAGYHTC
Trigger: GCAGGTGTGATAGCCAGCATGAGGGAGTGCCAAGGATTTGCTCCAGATGCAGAACTTCACATTTTCAGGGTCTTTACCAATAATCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343411.8
ENST00000569770.5
ENST00000570012.1
CDS TCA 90 bp CCTCTACAAAGTAGCCCATGCTTCTCAGATGCTGGTACATATCCCTaGAATTGGTGTGGATGTGATCACCATTCCAGTCTAAAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: PLQSSPCFSDAGTYP*NWCGCDHHSSLKGH
Trigger: ATGACCCTTTAGACTGGAATGGTGATCACATCCACACCAATTTCAGGGATATGTACCAGCATCTGAGAAGCATGGGCTACTTTGTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS GCA 90 bp TTTATATTAAAGATCACATCAGTAAGCGAAAGCAGCTACCAGTTCTaGCAGCAGCACCCTGTAGAAGCAGCAGCAAAACCTCTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: FILKITSVSESSYQF*QQHPVEAAAKPLQA
Trigger: TGCTTGGAGAGGTTTTGCTGCTGCTTCTACAGGGTGCTGCTGGCAGAACTGGTAGCTGCTTTCGCTTACTGATGTGATCTTTAATATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562788.2
CDS CCA 90 bp GGCGATTCGATCGAAAGTTGGGTAACACCACCTTGTCCAGGTCAATaGAGAGTAGCTTCTGATGTTTCCAAAGGTTACTTCAGGAAAATG +
Preference number: 5 (lower is better)
Translates to: GDSIESWVTPPCPGQ*RVASDVSKGYFRKM
Trigger: CATTTTCCTGAAGTAACCTTTGGAAACATCAGAAGCTACTCTCCATTGACCTGGACAAGGTGGTGTTACCCAACTTTCGATCGAATCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS-3UTR CAA 90 bp TCAGTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGACACCGAAGGGGTCTTaGGCGGGTGAACCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: SVCTVIKKIMESMLFLMMTPKGS*AGEPAA
Trigger: TGCAGCAGGTTCACCCGCCAAAGACCCCTTCGGTGT...CATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 90 bp GTAAGATACCTGATTATTGGTAAAGACCCTGAAAATGTGAAGTTCTaGATCTGGAGCAAATCCTTGGCACTCCCTCATGCTGGCTATCAC +
Preference number: 5 (lower is better)
Translates to: VRYLIIGKDPENVKF*IWSKSLALPHAGYH
Trigger: GTGATAGCCAGCATGAGGGAGTGCCAAGGATTTGCTCCAGATGCAGAACTTCACATTTTCAGGGTCTTTACCAATAATCAGGTATCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343411.8
ENST00000569770.5
ENST00000570012.1
CDS GCA 90 bp TCATTCCCCTTGAAGAAAAGCGGGCGATGTTATCTTCAAAGTCAATaGCGCCTACTCCAATCACATCCATTTGATCAGCAGGGTTATTCA +
Preference number: 5 (lower is better)
Translates to: SFPLKKSGRCYLQSQ*RLLQSHPFDQQGYS
Trigger: TGAATAACCCTGCTGATCAAATGGATGTGATTGGAGTAGGCGGCATTGACTTTGAAGATAACATCGCCCGCTTTTCTTCAAGGGGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343411.8
ENST00000563231.5
ENST00000565863.1
ENST00000569770.5
ENST00000570012.1
CDS-3UTR CAA 90 bp AATTACAAAACATGGTGGCAGGTGATACTTACAAAAATAAAGCGAAGGTCTATGTCCAGCGTTCGCTCGTaGGTCCAGTTGGTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: NYKTWWQVILTKIKRRSMSSVRS*VQLVLS
Trigger: GGAGAGAACCAACTGGACCAACGAGCGAACGCTGGA...CATAGACCTTCGCTTTATTTTTGTAAGTATCACCTGCCACCATGTTTTGTAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp GCATGTTTCCTTCAAATCTCAGTCTGTACTGTCATTAAAAAGATCATGGAATCTTCCCAGAGAACTCTCTaGCTTCGCGGGGGAGTAGGA +
Preference number: 5 (lower is better)
Translates to: ACFLQISVCTVIKKIMESSQRTL*LRGGVG
Trigger: TCCTACTCCCCCGCGAAGCAAGAGAGTTCTCTGGGA...AGATTCCATGATCTTTTTAATGACAGTACAGACTGAGATTTGAAGGAAACATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp TTGTTTGGAAAGTACATCCTTCCCCTGCAGTCAGAAGACCCCAGACAGCCTTTCTCAGGGTTGTATCATTaGTTTGGAAAGTACATCCTT +
Preference number: 5 (lower is better)
Translates to: LFGKYILPLQSEDPRQPFSGLYH*FGKYIL
Trigger: AAGGATGTACTTTCCAAACAAATGATACAACCCTGA...GAAAGGCTGTCTGGGGTCTTCTGACTGCAGGGGAAGGATGTACTTTCCAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp GTTTCTTCCCACAGAGCAAAACCACGAGCAGAAGCAGCCAGATGTTaGCAAGCTTCATGGTCACAAGCGAATATGATCATAAAATTGCAT +
Preference number: 5 (lower is better)
Translates to: VSSHRAKPRAEAARC*QASWSQANMIIKLH
Trigger: ATGCAATTTTATGATCATATTCGCTTGTGACCATGAAGCTTGTCAACATCTGGCTGCTTCTGCTCGTGGTTTTGCTCTGTGGGAAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp TTCCTGCACTCTGTGGTGCACAGTATCATTATTAACTCTGGGATCTaGAAAACTCGTTCAGGCCAATACAACTTAGACCCGAAGAAGACA +
Preference number: 5 (lower is better)
Translates to: FLHSVVHSIIINSGI*KTRSGQYNLDPKKT
Trigger: TGTCTTCTTCGGGTCTAAGTTGTATTGGCCTGAACGAGTTTTTCAGATCCCAGAGTTAATAATGATACTGTGCACCACAGAGTGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS-3UTR CAA 90 bp TCAGTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGTTTAAAGGCTGTGGCTaGGCCCAAGACAAGCGTGGA +
Preference number: 5 (lower is better)
Translates to: SVCTVIKKIMESMLFLMMFKGCG*AQDKRG
Trigger: TCCACGCTTGTCTTGGGCCAAGCCACAGCCTTTAAA...CATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp CGAGGGAGAAAGATCAAAATCAAGTCCCTGTTCATGAGATTCTACTaGGTTTACAATATGACCAGCAGGAGCCTGTTTTTGCATAAAGCT +
Preference number: 5 (lower is better)
Translates to: RGRKIKIKSLFMRFY*VYNMTSRSLFLHKA
Trigger: AGCTTTATGCAAAAACAGGCTCCTGCTGGTCATATTGTAAACTCAGTAGAATCTCATGAACAGGGACTTGATTTTGATCTTTCTCCCTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS-3UTR CAA 90 bp AATTACAAAACATGGTGGCAGGTGATACTTACAAAAATAAAGCGAAGGTCTATGAGTCCTGTACTCCATTaGTACCACAGAACCAACGTC +
Preference number: 5 (lower is better)
Translates to: NYKTWWQVILTKIKRRSMSPVLH*YHRTNV
Trigger: GACGTTGGTTCTGTGGTACAAATGGAGTACAGGACT...CATAGACCTTCGCTTTATTTTTGTAAGTATCACCTGCCACCATGTTTTGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp TCAGTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGAAGGCAACTTCAATGTaGTCTCCGTTCTGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: SVCTVIKKIMESMLFLMMKATSM*SPFCGK
Trigger: TTTGCCACAGAACGGAGACAACATTGAAGTTGCCTT...CATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 90 bp ACATGTAGGGACACTCAGTCAGATCTATGTAGCTGGGGCTCAAACTaGAATAAAGAATACAGTGTTAGAGTAGATCATATGAGAAAACTA +
Preference number: 5 (lower is better)
Translates to: TCRDTQSDLCSWGSN*NKEYSVRVDHMRKL
Trigger: TAGTTTTCTCATATGATCTACTCTAACACTGTATTCTTTATTTCAGTTTGAGCCCCAGCTACATAGATCTGACTGAGTGTCCCTACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CCA 90 bp TTCTTTTATCTGAATCACCTCAAAATCACTAGGGTAGTCACTGGATaGATTGTTTCGAGGTATAATTCTCCAATTGTCTACTTCACTGCT +
Preference number: 5 (lower is better)
Translates to: FFYLNHLKITRVVTG*IVSRYNSPIVYFTA
Trigger: AGCAGTGAAGTAGACAATTGGAGAATTATACCTCGAAACAATCCATCCAGTGACTACCCTAGTGATTTTGAGGTGATTCAGATAAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp GCATGTTTCCTTCAAATCTCAGTCTGTACTGTCATTAAAAAGATCATGGAATCTGCATCCACCACTGCCTaGTGTTTTCATCATAAAACT +
Preference number: 5 (lower is better)
Translates to: ACFLQISVCTVIKKIMESASTTA*CFHHKT
Trigger: AGTTTTATGATGAAAACACAAGGCAGTGGTGGATGC...AGATTCCATGATCTTTTTAATGACAGTACAGACTGAGATTTGAAGGAAACATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp GTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGGAAGGTTGTATCATTTGTTaGGAAAGTACATCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: VCTVIKKIMESMLFLMMEGCIIC*ESTSFP
Trigger: GGGGAAGGATGTACTTTCCAAACAAATGATACAACC...TTCCATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS-3UTR CAA 90 bp GTCTGTACTGTCATTAAAAAGATCATGGAATCTATGTTGTTCCTCATGATGGAACAAGCGTCTTTTAGCTaGGTCAGGGTTGTATCATTT +
Preference number: 5 (lower is better)
Translates to: VCTVIKKIMESMLFLMMEQASFS*VRVVSF
Trigger: AAATGATACAACCCTGACCAAGCTAAAAGACGCTTG...TTCCATCATGAGGAACAACATAGATTCCATGATCTTTTTAATGACAGTACAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 72 bp CCCACAGCTGGGAGCCTCAGCTCCGCCGACCCAGCGTaGCCTGTCTGTCCCGCGCTCCCGGGGCTTGCGTGC +
Preference number: 6 (lower is better)
Translates to: PTAGSLSSADPA*PVCPALPGLAC
Trigger: GCACGCAAGCCCCGGGAGCGCGGGACAGACAGGGCACGCTGGGTCGGCGGAGCTGAGGCTCCCAGCTGTGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS CCA 72 bp GCGAGACTGGGCGACCGGGCCAGCGAGGCCCACAGCTaGGAGCCTCAGCTCCGCCGACCCAGCGTGCCCTGT +
Preference number: 6 (lower is better)
Translates to: ARLGDRASEAHS*EPQLRRPSVPC
Trigger: ACAGGGCACGCTGGGTCGGCGGAGCTGAGGCTCCCAGCTGTGGGCCTCGCTGGCCCGGTCGCCCAGTCTCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS CCA 72 bp GGCTCACCCACCAGCGCCGTCCGTGAAGGCTCTCTCTaGCCCTCACGGTCAGCCAGGCTGCCGGTCACACCG +
Preference number: 6 (lower is better)
Translates to: GSPTSAVREGSL*PSRSARLPVTP
Trigger: CGGTGTGACCGGCAGCCTGGCTGACCGTGAGGGCCAGAGAGAGCCTTCACGGACGGCGCTGGTGGGTGAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS CAA 90 bp AGCAGCTGGCGGCCCCACGGCACCAGCACAGGCCCCAGAGGCGGGTaGAGGCTCCACCACCACATACCGCCCAGGCGATCTCAGGCAGTT +
Preference number: 6 (lower is better)
Translates to: SSWRPHGTSTGPRGG*RLHHHIPPRRSQAV
Trigger: AACTGCCTGAGATCGCCTGGGCGGTATGTGGTGGTGGAGCCTCAACCCGCCTCTGGGGCCTGTGCTGGTGCCGTGGGGCCGCCAGCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 72 bp CAGGCTGCCGGTCACACCGAAGGGGTCTTTGGCGGGTaGACCTGCTGCATGAGCTGCGGGCGCTTCACCCTG +
Preference number: 6 (lower is better)
Translates to: QAAGHTEGVFGG*TCCMSCGRFTL
Trigger: CAGGGTGAAGCGCCCGCAGCTCATGCAGCAGGTTCACCCGCCAAAGACCCCTTCGGTGTGACCGGCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS CCA 72 bp GGTCAGCCAGGCTGCCGGTCACACCGAAGGGGTCTTTaGCGGGTGAACCTGCTGCATGAGCTGCGGGCGCTT +
Preference number: 6 (lower is better)
Translates to: GQPGCRSHRRGL*RVNLLHELRAL
Trigger: AAGCGCCCGCAGCTCATGCAGCAGGTTCACCCGCCAAAGACCCCTTCGGTGTGACCGGCAGCCTGGCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS TCA 72 bp CCTGCTCCACTGGGAGGGCGCTGGCGGTTCCCAGAGTaGCTGAGGCTAGGCGGTGTCACCCCATACGATGTG +
Preference number: 6 (lower is better)
Translates to: PAPLGGRWRFPE*LRLGGVTPYDV
Trigger: CACATCGTATGGGGTGACACCGCCTAGCCTCAGTCACTCTGGGAACCGCCAGCGCCCTCCCAGTGGAGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343411.8
ENST00000561936.1
ENST00000562886.1
ENST00000564049.1
ENST00000570064.5
CDS TCA 72 bp ACACCGAAGGGGTCTTTGGCGGGTGAACCTGCTGCATaGGCTGCGGGCGCTTCACCCTGGGCTTCCTCCGCT +
Preference number: 6 (lower is better)
Translates to: TPKGSLAGEPAA*AAGASPWASSA
Trigger: AGCGGAGGAAGCCCAGGGTGAAGCGCCCGCAGCTCATGCAGCAGGTTCACCCGCCAAAGACCCCTTCGGTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS GCA 72 bp TGGCGCGGGATGGCTCTCAGCAGCCGTCTGCTCGAATaGCTTCCCGTAGCATGCCAGAAGCCAGAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: WRGMALSSRLLE*LPVACQKPEPR
Trigger: CCTGGGCTCTGGCTTCTGGCATGCTACGGGAAGGCATTCGAGCAGACGGCTGCTGAGAGCCATCCCGCGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 72 bp GTGAAGGCTCTCTCTGGCCCTCACGGTCAGCCAGGCTaGCGGTCACACCGAAGGGGTCTTTGGCGGGTGAAC +
Preference number: 6 (lower is better)
Translates to: VKALSGPHGQPG*RSHRRGLWRVN
Trigger: GTTCACCCGCCAAAGACCCCTTCGGTGTGACCGGCAGCCTGGCTGACCGTGAGGGCCAGAGAGAGCCTTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS CCA 72 bp CATCTGCCTGCAGTGTCTGGGCAACCTGGCGCGGGATaGCTCTCAGCAGCCGTCTGCTCGAATGCCTTCCCG +
Preference number: 6 (lower is better)
Translates to: HLPAVSGQPGAG*LSAAVCSNAFP
Trigger: CGGGAAGGCATTCGAGCAGACGGCTGCTGAGAGCCATCCCGCGCCAGGTTGCCCAGACACTGCAGGCAGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 72 bp GGCTCCAGAGGCCACACTCTTCAGAGGCAGGTCGCCTaGTTTCCTAAAATCTCCCCTGCGCCGCCGGGAGCT +
Preference number: 6 (lower is better)
Translates to: GSRGHTLQRQVA*FPKISPAPPGA
Trigger: AGCTCCCGGCGGCGCAGGGGAGATTTTAGGAAAGCAGGCGACCTGCCTCTGAAGAGTGTGGCCTCTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564444.1
ENST00000569907.5
CDS GCA 72 bp GCATACGTGGATCCTGCTTCTCAAGCTGCACCCACGTaGAGTGGGCGGGCGGCTCTGCGCAACTGCTTCACC +
Preference number: 6 (lower is better)
Translates to: AYVDPASQAAPT*SGRAALRNCFT
Trigger: GGTGAAGCAGTTGCGCAGAGCCGCCCGCCCACTGCACGTGGGTGCAGCTTGAGAAGCAGGATCCACGTATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565863.1
CDS GCA 72 bp AGAGCACCAGGCATACGTGGATCCTGCTTCTCAAGCTaGACCCACGTGCAGTGGGCGGGCGGCTCTGCGCAA +
Preference number: 6 (lower is better)
Translates to: RAPGIRGSCFSS*THVQWAGGSAQ
Trigger: TTGCGCAGAGCCGCCCGCCCACTGCACGTGGGTGCAGCTTGAGAAGCAGGATCCACGTATGCCTGGTGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565863.1
CDS GCA 72 bp ATGGCCTCCCTGAGAGCACCAGGCATACGTGGATCCTaGTTCTCAAGCTGCACCCACGTGCAGTGGGCGGGC +
Preference number: 6 (lower is better)
Translates to: MASLRAPGIRGS*FSSCTHVQWAG
Trigger: GCCCGCCCACTGCACGTGGGTGCAGCTTGAGAAGCAGGATCCACGTATGCCTGGTGCTCTCAGGGAGGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565863.1
CDS CCA 72 bp ACCAGGGCTCCACTCCCAGTGCCCCAGGGTTCCAGGTaGTCAGCACCACTGTCCACCAGGTTGCACCAACTG +
Preference number: 6 (lower is better)
Translates to: TRAPLPVPQGSR*SAPLSTRLHQL
Trigger: CAGTTGGTGCAACCTGGTGGACAGTGGTGCTGACCACCTGGAACCCTGGGGCACTGGGAGTGGAGCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS GCA 72 bp GCACCCACGTGCAGTGGGCGGGCGGCTCTGCGCAACTaGTTCACCTCATTACAGGAGATGCCAGCCTTTCTC +
Preference number: 6 (lower is better)
Translates to: APTCSGRAALRN*FTSLQEMPAFL
Trigger: GAGAAAGGCTGGCATCTCCTGTAATGAGGTGAAGCAGTTGCGCAGAGCCGCCCGCCCACTGCACGTGGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565863.1
CDS GCA 72 bp CTCAAGCTGCACCCACGTGCAGTGGGCGGGCGGCTCTaGGCAACTGCTTCACCTCATTACAGGAGATGCCAG +
Preference number: 6 (lower is better)
Translates to: LKLHPRAVGGRL*ATASPHYRRCQ
Trigger: CTGGCATCTCCTGTAATGAGGTGAAGCAGTTGCGCAGAGCCGCCCGCCCACTGCACGTGGGTGCAGCTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565863.1
CDS CCA 72 bp TATCCCATCTGCCAGAGCACATCTGCCTGCAGTGTCTaGGCAACCTGGCGCGGGATGGCTCTCAGCAGCCGT +
Preference number: 6 (lower is better)
Translates to: YPICQSTSACSV*ATWRGMALSSR
Trigger: ACGGCTGCTGAGAGCCATCCCGCGCCAGGTTGCCCAGACACTGCAGGCAGATGTGCTCTGGCAGATGGGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS CCA 72 bp GAGGGTCGGGGTGCACGTGGGAAAGCAGCTGCACACTaGGTCCTCGATCATGGCCCTCTGGGGACTAAGGAT +
Preference number: 6 (lower is better)
Translates to: EGRGARGKAAAH*VLDHGPLGTKD
Trigger: ATCCTTAGTCCCCAGAGGGCCATGATCGAGGACCCAGTGTGCAGCTGCTTTCCCACGTGCACCCCGACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS CCA 72 bp CGTGGATCCTGCTTCTCAAGCTGCACCCACGTGCAGTaGGCGGGCGGCTCTGCGCAACTGCTTCACCTCATT +
Preference number: 6 (lower is better)
Translates to: RGSCFSSCTHVQ*AGGSAQLLHLI
Trigger: AATGAGGTGAAGCAGTTGCGCAGAGCCGCCCGCCCACTGCACGTGGGTGCAGCTTGAGAAGCAGGATCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565863.1
CDS CAA 90 bp GGGCGCTTCACCCTGGGCTTCCTCCGCTTCGGCCTGCTCTTGGCCTaGTTGATTTGTACCACAAAGAAGGCCAGGACCACCATGGCTCCC +
Preference number: 6 (lower is better)
Translates to: GRFTLGFLRFGLLLA*LICTTKKARTTMAP
Trigger: GGGAGCCATGGTGGTCCTGGCCTTCTTTGTGGTACAAATCAACAAGGCCAAGAGCAGGCCGAAGCGGAGGAAGCCCAGGGTGAAGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS TCA 72 bp CAGGCGCCGCTCTCTCCAGGGGACAAGGGCCTCACTTaGGGGCGATTCGATCGAAAGTTGGGTAACACCACC +
Preference number: 6 (lower is better)
Translates to: QAPLSPGDKGLT*GRFDRKLGNTT
Trigger: GGTGGTGTTACCCAACTTTCGATCGAATCGCCCTCAAGTGAGGCCCTTGTCCCCTGGAGAGAGCGGCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS TCA 72 bp GTCAGCACCACTGTCCACCAGGTTGCACCAACTGCCTaGGTGCCACACTCAGCTCCTCATGGATGGGGGCAG +
Preference number: 6 (lower is better)
Translates to: VSTTVHQVAPTA*VPHSAPHGWGQ
Trigger: CTGCCCCCATCCATGAGGAGCTGAGTGTGGCACTCAGGCAGTTGGTGCAACCTGGTGGACAGTGGTGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 72 bp TGTGAGAGCGGGACGGTAAACACACTCAGAGTGGCGTaGGGGTCGGGGTGCACGTGGGAAAGCAGCTGCACA +
Preference number: 6 (lower is better)
Translates to: CESGTVNTLRVA*GSGCTWESSCT
Trigger: TGTGCAGCTGCTTTCCCACGTGCACCCCGACCCTCACGCCACTCTGAGTGTGTTTACCGTCCCGCTCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS GCA 72 bp GCACCTGTATATCCCATCTGCCAGAGCACATCTGCCTaGAGTGTCTGGGCAACCTGGCGCGGGATGGCTCTC +
Preference number: 6 (lower is better)
Translates to: APVYPICQSTSA*SVWATWRGMAL
Trigger: GAGAGCCATCCCGCGCCAGGTTGCCCAGACACTGCAGGCAGATGTGCTCTGGCAGATGGGATATACAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 72 bp CCTGCCTGGCAGGAGAGAGGGGAGAGCTTAGGAAGCTaGGCCTGGATTTCTCCAGGCTTTCTCCGTGTGAGG +
Preference number: 6 (lower is better)
Translates to: PAWQERGESLGS*AWISPGFLRVR
Trigger: CCTCACACGGAGAAAGCCTGGAGAAATCCAGGCGCAGCTTCCTAAGCTCTCCCCTCTCTCCTGCCAGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CCA 72 bp CGAGCGAGAGGCCGTTGTCCACGTCCCTCCGGAGCTTaGCGATCTCTTCAGGGAAGTACTCCTCCTCACTGT +
Preference number: 6 (lower is better)
Translates to: RARGRCPRPSGA*RSLQGSTPPHC
Trigger: ACAGTGAGGAGGAGTACTTCCCTGAAGAGATCGCCAAGCTCCGGAGGGACGTGGACAACGGCCTCTCGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS CCA 72 bp GGTTACTGGGCGCCGTCTCGTTTAAAGGCTGTGGCTTaGCCCAAGACAAGCGTGGACAGGCTGGTAGAGGCC +
Preference number: 6 (lower is better)
Translates to: GYWAPSRLKAVA*PKTSVDRLVEA
Trigger: GGCCTCTACCAGCCTGTCCACGCTTGTCTTGGGCCAAGCCACAGCCTTTAAACGAGACGGCGCCCAGTAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000570064.5
CDS CAA 72 bp ACGAGCGAGAGGCCGTTGTCCACGTCCCTCCGGAGCTaGGCGATCTCTTCAGGGAAGTACTCCTCCTCACTG +
Preference number: 6 (lower is better)
Translates to: TSERPLSTSLRS*AISSGKYSSSL
Trigger: CAGTGAGGAGGAGTACTTCCCTGAAGAGATCGCCAAGCTCCGGAGGGACGTGGACAACGGCCTCTCGCTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS CAA 72 bp CAGGGTTCCAGGTGGTCAGCACCACTGTCCACCAGGTaGCACCAACTGCCTGAGTGCCACACTCAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: QGSRWSAPLSTR*HQLPECHTQLL
Trigger: GAGGAGCTGAGTGTGGCACTCAGGCAGTTGGTGCAACCTGGTGGACAGTGGTGCTGACCACCTGGAACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS CAA 90 bp CGCTTCACCCTGGGCTTCCTCCGCTTCGGCCTGCTCTTGGCCTTGTaGATTTGTACCACAAAGAAGGCCAGGACCACCATGGCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: RFTLGFLRFGLLLAL*ICTTKKARTTMAPR
Trigger: CCTGGGAGCCATGGTGGTCCTGGCCTTCTTTGTGGTACAAATCAACAAGGCCAAGAGCAGGCCGAAGCGGAGGAAGCCCAGGGTGAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS TCA 72 bp GCACAGAGCCCCTGTGCTCTATTAAGCTATCCTCCATaGGCCGCAGGAGCCACGCCTGATTGGTTCCTCCCG +
Preference number: 6 (lower is better)
Translates to: AQSPCALLSYPP*AAGATPDWFLP
Trigger: CGGGAGGAACCAATCAGGCGTGGCTCCTGCGGCTCATGGAGGATAGCTTAATAGAGCACAGGGGCTCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 72 bp CCCATCTGCCTTGCCTGCAGGCGGGGGACGATCAAATaGACGTGTGCGATTCCTGCACTCTGTGGTGCACAG +
Preference number: 6 (lower is better)
Translates to: PICLACRRGTIK*TCAIPALCGAQ
Trigger: CTGTGCACCACAGAGTGCAGGAATCGCACACGTTCATTTGATCGTCCCCCGCCTGCAGGCAAGGCAGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS TCA 72 bp CCTAAAATCTCCCCTAGGGATTCAATCCAAGAAGTATaGATCTGCGCCGCCGGGAGCTCAGGGCCGGCGGGC +
Preference number: 6 (lower is better)
Translates to: PKISPRDSIQEV*ICAAGSSGPAG
Trigger: GCCCGCCGGCCCTGAGCTCCCGGCGGCGCAGATTCATACTTCTTGGATTGAATCCCTAGGGGAGATTTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567557.1
CDS GCA 72 bp AGGGAGAGGCTGGCTCTTCGCAGGGGACGTGATGATTaGCACTTCTGGCTCCACCGGGTTTCATTGCAGGGT +
Preference number: 6 (lower is better)
Translates to: RERLALRRGRDD*HFWLHRVSLQG
Trigger: ACCCTGCAATGAAACCCGGTGGAGCCAGAAGTGGCAATCATCACGTCCCCTGCGAAGAGCCAGCCTCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 72 bp ACTCCCTCATGCTGGCTATCACACCTGCCACGAATGTaGCATGGCCCAACCCATCGTCCAGCGTTCGCTCGT +
Preference number: 6 (lower is better)
Translates to: TPSCWLSHLPRM*HGPTHRPAFAR
Trigger: ACGAGCGAACGCTGGACGATGGGTTGGGCCATGGCACATTCGTGGCAGGTGTGATAGCCAGCATGAGGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 72 bp GCACCACTGTCCACCAGGTTGCACCAACTGCCTGAGTaGCACACTCAGCTCCTCATGGATGGGGGCAGAATG +
Preference number: 6 (lower is better)
Translates to: APLSTRLHQLPE*HTQLLMDGGRM
Trigger: CATTCTGCCCCCATCCATGAGGAGCTGAGTGTGGCACTCAGGCAGTTGGTGCAACCTGGTGGACAGTGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS GCA 72 bp AGGGTTCCAGGTGGTCAGCACCACTGTCCACCAGGTTaGACCAACTGCCTGAGTGCCACACTCAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: RVPGGQHHCPPG*TNCLSATLSSS
Trigger: TGAGGAGCTGAGTGTGGCACTCAGGCAGTTGGTGCAACCTGGTGGACAGTGGTGCTGACCACCTGGAACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS GCA 72 bp AGGATGGCCTCTCGGCAGGTTAGAGCCGCTGAGTGCTaGTCTACCCGCAGCCATTACGAAAACCACTCAGCG +
Preference number: 6 (lower is better)
Translates to: RMASRQVRAAEC*STRSHYENHSA
Trigger: CGCTGAGTGGTTTTCGTAATGGCTGCGGGTAGAGCAGCACTCAGCGGCTCTAACCTGCCGAGAGGCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS CCA 72 bp CTGGCTCTTCGCAGGGGACGTGATGATTGCCACTTCTaGCTCCACCGGGTTTCATTGCAGGGTACTGTGGGG +
Preference number: 6 (lower is better)
Translates to: LALRRGRDDCHF*LHRVSLQGTVG
Trigger: CCCCACAGTACCCTGCAATGAAACCCGGTGGAGCCAGAAGTGGCAATCATCACGTCCCCTGCGAAGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS CCA 72 bp GAGAGGTTGATACGCTGGCAACAGCAGCACAGAGCTTaGGAGGACACCGGAGCTAGAGCGAAGAGCGCGATG +
Preference number: 6 (lower is better)
Translates to: ERLIRWQQQHRA*EDTGARAKSAM
Trigger: CATCGCGCTCTTCGCTCTAGCTCCGGTGTCCTCCCAAGCTCTGTGCTGCTGTTGCCAGCGTATCAACCTCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CCA 72 bp AGCGCTGCCCTAGGCTGGCATCTGGGAACTTGGCTCTaGAATGCTCCTGCACAGATAAGGCCTCTGTGCCAG +
Preference number: 6 (lower is better)
Translates to: SAALGWHLGTWL*NAPAQIRPLCQ
Trigger: CTGGCACAGAGGCCTTATCTGTGCAGGAGCATTCCAGAGCCAAGTTCCCAGATGCCAGCCTAGGGCAGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CAA 72 bp AGGTTACTGGGCGCCGTCTCGTTTAAAGGCTGTGGCTaGGCCCAAGACAAGCGTGGACAGGCTGGTAGAGGC +
Preference number: 6 (lower is better)
Translates to: RLLGAVSFKGCG*AQDKRGQAGRG
Trigger: GCCTCTACCAGCCTGTCCACGCTTGTCTTGGGCCAAGCCACAGCCTTTAAACGAGACGGCGCCCAGTAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000570064.5
CDS CAA 90 bp CTGAAGATGACGAGCGAGAGGCCGTTGTCCACGTCCCTCCGGAGCTaGGCGATCTCTTCAGGGAAGTACTCCTCCTCACTGTCCACCATC +
Preference number: 6 (lower is better)
Translates to: LKMTSERPLSTSLRS*AISSGKYSSSLSTI
Trigger: GATGGTGGACAGTGAGGAGGAGTACTTCCCTGAAGAGATCGCCAAGCTCCGGAGGGACGTGGACAACGGCCTCTCGCTCGTCATCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS CAA 90 bp GCTTGGCCCAAGACAAGCGTGGACAGGCTGGTAGAGGCCGAGGTTTaGGGTCTCCCAAATGGGCCTCCAGAACCTTGGAGTACCGATGAA +
Preference number: 6 (lower is better)
Translates to: AWPKTSVDRLVEAEV*GLPNGPPEPWSTDE
Trigger: TTCATCGGTACTCCAAGGTTCTGGAGGCCCATTTGGGAGACCCAAAACCTCGGCCTCTACCAGCCTGTCCACGCTTGTCTTGGGCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343411.8
ENST00000561936.1
ENST00000562886.1
ENST00000564049.1
ENST00000570064.5
CDS TCA 72 bp CTTTCACGCCAGAACCCCGCACGCCAGCACCATAGGTaGCAATGTCAGGTTTCATGCGACCGTAGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: LSRQNPARQHHR*QCQVSCDRSLL
Trigger: CAGGAGGCTACGGTCGCATGAAACCTGACATTGTCACCTATGGTGCTGGCGTGCGGGGTTCTGGCGTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000565863.1
ENST00000569770.5
ENST00000570012.1
CDS TCA 72 bp GCTGACACTTCCACAGCTGCCCTAGGTATGGGCACCTaGTGCCAACGAAGAAGCCCAAAGCGCCTCTCCACT +
Preference number: 6 (lower is better)
Translates to: ADTSTAALGMGT*CQRRSPKRLST
Trigger: AGTGGAGAGGCGCTTTGGGCTTCTTCGTTGGCATCAGGTGCCCATACCTAGGGCAGCTGTGGAAGTGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS GCA 72 bp AAAACCACTCAGCGGCGCACACAAACTGGCCCCACTTaGTGGCAGGCACAGCCACTGGCTGAAGTAGCATCA +
Preference number: 6 (lower is better)
Translates to: KTTQRRTQTGPT*WQAQPLAEVAS
Trigger: TGATGCTACTTCAGCCAGTGGCTGTGCCTGCCAGCAAGTGGGGCCAGTTTGTGTGCGCCGCTGAGTGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS CCA 72 bp CCCAGGAAGCCGCTTTCTTGGTCACAGAAATGGAGATaGCCAGGTAGCCCGACCAAGGCCATAAGACCGAGG +
Preference number: 6 (lower is better)
Translates to: PRKPLSWSQKWR*PGSPTKAIRPR
Trigger: CCTCGGTCTTATGGCCTTGGTCGGGCTACCTGGCCATCTCCATTTCTGTGACCAAGAAAGCGGCTTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000564643.1
ENST00000568051.1
ENST00000570064.5
CDS CCA 72 bp CTGAGGCTAGGCGGTGTCACCCCATACGATGTGTACTaGAGGAGGGCATCCAGAAGCCAAAAGCAGTCTGCG +
Preference number: 6 (lower is better)
Translates to: LRLGGVTPYDVY*RRASRSQKQSA
Trigger: CGCAGACTGCTTTTGGCTTCTGGATGCCCTCCTCCAGTACACATCGTATGGGGTGACACCGCCTAGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000561936.1
ENST00000562886.1
ENST00000564049.1
CDS CAA 72 bp ACCCTGGGCTTCCTCCGCTTCGGCCTGCTCTTGGCCTaGTTGATTTGTACCACAAAGAAGGCCAGGACCACC +
Preference number: 6 (lower is better)
Translates to: TLGFLRFGLLLA*LICTTKKARTT
Trigger: GGTGGTCCTGGCCTTCTTTGTGGTACAAATCAACAAGGCCAAGAGCAGGCCGAAGCGGAGGAAGCCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS TCA 72 bp TGGGCTTCCTCCGCTTCGGCCTGCTCTTGGCCTTGTTaGTTTGTACCACAAAGAAGGCCAGGACCACCATGG +
Preference number: 6 (lower is better)
Translates to: WASSASACSWPC*FVPQRRPGPPW
Trigger: CCATGGTGGTCCTGGCCTTCTTTGTGGTACAAATCAACAAGGCCAAGAGCAGGCCGAAGCGGAGGAAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS TCA 72 bp GCTCATTCAGAGACAGTGAGACCATGTGACACCCACTaGGAAAAGAAGGGCCTGAGAGCGGGGTCTCAGGGG +
Preference number: 6 (lower is better)
Translates to: AHSETVRPCDTH*EKKGLRAGSQG
Trigger: CCCCTGAGACCCCGCTCTCAGGCCCTTCTTTTCTCAGTGGGTGTCACATGGTCTCACTGTCTCTGAATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS GCA 72 bp AAATCCTTGGCACTCCCTCATGCTGGCTATCACACCTaGCACGAATGTGCCATGGCCCAACCCATCGTCCAG +
Preference number: 6 (lower is better)
Translates to: KSLALPHAGYHT*HECAMAQPIVQ
Trigger: CTGGACGATGGGTTGGGCCATGGCACATTCGTGGCAGGTGTGATAGCCAGCATGAGGGAGTGCCAAGGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 72 bp CTAAGGATGGCCTCTCGGCAGGTTAGAGCCGCTGAGTaGTGCTCTACCCGCAGCCATTACGAAAACCACTCA +
Preference number: 6 (lower is better)
Translates to: LRMASRQVRAAE*CSTRSHYENHS
Trigger: TGAGTGGTTTTCGTAATGGCTGCGGGTAGAGCAGCACTCAGCGGCTCTAACCTGCCGAGAGGCCATCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS GCA 72 bp ACTCCCTCATGCTGGCTATCACACCTGCCACGAATGTaGCATGGCCCAACCCAACGTCCAATGGGGTTGATC +
Preference number: 6 (lower is better)
Translates to: TPSCWLSHLPRM*HGPTQRPMGLI
Trigger: GATCAACCCCATTGGACGTTGGGTTGGGCCATGGCACATTCGTGGCAGGTGTGATAGCCAGCATGAGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570012.1
CDS GCA 72 bp AGGCTGGCATCTGGGAACTTGGCTCTGGAATGCTCCTaGACAGATAAGGCCTCTGTGCCAGCCTGCTGTCTA +
Preference number: 6 (lower is better)
Translates to: RLASGNLALECS*TDKASVPACCL
Trigger: TAGACAGCAGGCTGGCACAGAGGCCTTATCTGTGCAGGAGCATTCCAGAGCCAAGTTCCCAGATGCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS GCA 72 bp AGCAGACCTAGCTTCAGAAGGGCTTGCTTACAGCGCTaGCCTAGGCTGGCATCTGGGAACTTGGCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: SRPSFRRACLQR*PRLASGNLALE
Trigger: TTCCAGAGCCAAGTTCCCAGATGCCAGCCTAGGGCAGCGCTGTAAGCAAGCCCTTCTGAAGCTAGGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CCA 72 bp CTGCATCTGGAGCAAATCCTTGGCACTCCCTCATGCTaGCTATCACACCTGCCACGAATGTGCCATGGCCCA +
Preference number: 6 (lower is better)
Translates to: LHLEQILGTPSC*LSHLPRMCHGP
Trigger: TGGGCCATGGCACATTCGTGGCAGGTGTGATAGCCAGCATGAGGGAGTGCCAAGGATTTGCTCCAGATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570012.1
CDS CCA 72 bp CTGAGGCTAGGCGGTGTCACCCCATACGATGTGTACTaGAGGAGGGCATCCAGAAGCCAAAAGCAGTCCTTC +
Preference number: 6 (lower is better)
Translates to: LRLGGVTPYDVY*RRASRSQKQSF
Trigger: GAAGGACTGCTTTTGGCTTCTGGATGCCCTCCTCCAGTACACATCGTATGGGGTGACACCGCCTAGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS CCA 72 bp GAGAGCAGATGCACTGAGAAGAGCCGGCATCACTTCTaGGAGGTTCCTGACAAAGATGCACAACCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: ESRCTEKSRHHF*EVPDKDAQPGA
Trigger: GGCCCCAGGTTGTGCATCTTTGTCAGGAACCTCCCAGAAGTGATGCCGGCTCTTCTCAGTGCATCTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564444.1
CDS CCA 72 bp TGGCAGGAGAGAGGGGAGAGCTTAGGAAGCTGCGCCTaGATTTCTCCAGGCTTTCTCCGTGTGAGGCATCTT +
Preference number: 6 (lower is better)
Translates to: WQERGESLGSCA*ISPGFLRVRHL
Trigger: AAGATGCCTCACACGGAGAAAGCCTGGAGAAATCCAGGCGCAGCTTCCTAAGCTCTCCCCTCTCTCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CAA 72 bp TTGTACCAGTCACTGAAGATGACGAGCGAGAGGCCGTaGTCCACGTCCCTCCGGAGCTTGGCGATCTCTTCA +
Preference number: 6 (lower is better)
Translates to: LYQSLKMTSERP*STSLRSLAISS
Trigger: TGAAGAGATCGCCAAGCTCCGGAGGGACGTGGACAACGGCCTCTCGCTCGTCATCTTCAGTGACTGGTACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS CAA 72 bp CTGGGCTTCCTCCGCTTCGGCCTGCTCTTGGCCTTGTaGATTTGTACCACAAAGAAGGCCAGGACCACCATG +
Preference number: 6 (lower is better)
Translates to: LGFLRFGLLLAL*ICTTKKARTTM
Trigger: CATGGTGGTCCTGGCCTTCTTTGTGGTACAAATCAACAAGGCCAAGAGCAGGCCGAAGCGGAGGAAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000562906.2
ENST00000570064.5
CDS CAA 90 bp GTGCCATGGCCCAACCCATCGTCCAGCGTTCGCTCGTTGGTCCAGTaGGTTCTCTCCTTCACATTTTTGAAGTGGGGATGCTTCTCGCTC +
Preference number: 6 (lower is better)
Translates to: VPWPNPSSSVRSLVQ*VLSFTFLKWGCFSL
Trigger: GAGCGAGAAGCATCCCCACTTCAAAAATGTGAAGGAGAGAACCAACTGGACCAACGAGCGAACGCTGGACGATGGGTTGGGCCATGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS CAA 90 bp ACAGAAGTGTTGTACCAGTCACTGAAGATGACGAGCGAGAGGCCGTaGTCCACGTCCCTCCGGAGCTTGGCGATCTCTTCAGGGAAGTAC +
Preference number: 6 (lower is better)
Translates to: TEVLYQSLKMTSERP*STSLRSLAISSGKY
Trigger: GTACTTCCCTGAAGAGATCGCCAAGCTCCGGAGGGACGTGGACAACGGCCTCTCGCTCGTCATCTTCAGTGACTGGTACAACACTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS CAA 90 bp TGTTTCCAAAGGTTACTGGGCGCCGTCTCGTTTAAAGGCTGTGGCTaGGCCCAAGACAAGCGTGGACAGGCTGGTAGAGGCCGAGGTTTT +
Preference number: 6 (lower is better)
Translates to: CFQRLLGAVSFKGCG*AQDKRGQAGRGRGF
Trigger: AAAACCTCGGCCTCTACCAGCCTGTCCACGCTTGTCTTGGGCCAAGCCACAGCCTTTAAACGAGACGGCGCCCAGTAACCTTTGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000570064.5
CDS TCA 72 bp AACTGGCCCCACTTGCTGGCAGGCACAGCCACTGGCTaGAGTAGCATCATGTTCAGCTGGATCCAATTCCCT +
Preference number: 6 (lower is better)
Translates to: NWPHLLAGTATG*SSIMFSWIQFP
Trigger: AGGGAATTGGATCCAGCTGAACATGATGCTACTTCAGCCAGTGGCTGTGCCTGCCAGCAAGTGGGGCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 72 bp TTCCTGAAGATCTGTAGGAGCCACTGTCCTCACCTGTaGGAGCGGGACGGTAAACACACTCAGAGTGGCGTG +
Preference number: 6 (lower is better)
Translates to: FLKICRSHCPHL*ERDGKHTQSGV
Trigger: CACGCCACTCTGAGTGTGTTTACCGTCCCGCTCTCACAGGTGAGGACAGTGGCTCCTACAGATCTTCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 72 bp CAGATGTGTGCACAGCACTGGCTGGTCAAACTTTGCTaGCCACCACTGACACACGCAAGGCTACACCTGCGA +
Preference number: 6 (lower is better)
Translates to: QMCAQHWLVKLC*PPLTHARLHLR
Trigger: TCGCAGGTGTAGCCTTGCGTGTGTCAGTGGTGGTCAGCAAAGTTTGACCAGCCAGTGCTGTGCACACATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 72 bp TATTTTGTGCAGAGGGAAAATTCGCCCAGAGCCCAGTaGAGGAGAGAAAGACCCATCGGCAGGGCGGTGCAC +
Preference number: 6 (lower is better)
Translates to: YFVQRENSPRAQ*RRERPIGRAVH
Trigger: GTGCACCGCCCTGCCGATGGGTCTTTCTCTCCTTCACTGGGCTCTGGGCGAATTTTCCCTCTGCACAAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562788.2
CDS TCA 72 bp AAATGCCATTTGCGTCCACGGCCACCTAAATGCCACTaGCAGCAACTATGGTGGCCGTTTCCACGTCCCGAG +
Preference number: 6 (lower is better)
Translates to: KCHLRPRPPKCH*QQLWWPFPRPE
Trigger: CTCGGGACGTGGAAACGGCCACCATAGTTGCTGTCAGTGGCATTTAGGTGGCCGTGGACGCAAATGGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS GCA 72 bp GTTCTGCATCTGGAGCAAATCCTTGGCACTCCCTCATaGTGGCTATCACACCTGCCACGAATGTGCCATGGC +
Preference number: 6 (lower is better)
Translates to: VLHLEQILGTPS*WLSHLPRMCHG
Trigger: GCCATGGCACATTCGTGGCAGGTGTGATAGCCAGCATGAGGGAGTGCCAAGGATTTGCTCCAGATGCAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570012.1
CDS CCA 72 bp TGCACCAACTGCCTGAGTGCCACACTCAGCTCCTCATaGATGGGGGCAGAATGGAGCTCATTCAGAGACAGT +
Preference number: 6 (lower is better)
Translates to: CTNCLSATLSSS*MGAEWSSFRDS
Trigger: ACTGTCTCTGAATGAGCTCCATTCTGCCCCCATCCATGAGGAGCTGAGTGTGGCACTCAGGCAGTTGGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS CCA 72 bp ATGGAAGCCTGCCCCCAGCACTGGGCTGACAGCATCTaGAGCTGTCTCCTGGTCTCAAATCTCTTTTGGAGA +
Preference number: 6 (lower is better)
Translates to: MEACPQHWADSI*SCLLVSNLFWR
Trigger: TCTCCAAAAGAGATTTGAGACCAGGAGACAGCTCCAGATGCTGTCAGCCCAGTGCTGGGGGCAGGCTTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CCA 72 bp CTTGGGAGGACACCGGAGCTAGAGCGAAGAGCGCGATaGGAAAAACACTACTCTGGCTTAAGTGAGGGGGAA +
Preference number: 6 (lower is better)
Translates to: LGRTPELERRAR*EKHYSGLSEGE
Trigger: TTCCCCCTCACTTAAGCCAGAGTAGTGTTTTTCCCATCGCGCTCTTCGCTCTAGCTCCGGTGTCCTCCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CAA 72 bp TGGGCAGATGTGTGCACAGCACTGGCTGGTCAAACTTaGCTGACCACCACTGACACACGCAAGGCTACACCT +
Preference number: 6 (lower is better)
Translates to: WADVCTALAGQT*LTTTDTRKATP
Trigger: AGGTGTAGCCTTGCGTGTGTCAGTGGTGGTCAGCAAAGTTTGACCAGCCAGTGCTGTGCACACATCTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 72 bp GCAGAATGGAGCTCATTCAGAGACAGTGAGACCATGTaGCACCCACTGAGAAAAGAAGGGCCTGAGAGCGGG +
Preference number: 6 (lower is better)
Translates to: AEWSSFRDSETM*HPLRKEGPESG
Trigger: CCCGCTCTCAGGCCCTTCTTTTCTCAGTGGGTGTCACATGGTCTCACTGTCTCTGAATGAGCTCCATTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 72 bp GAAAGCAAAGACGTCCAGTCCTATCAGCAATTAGGCTaGAAGTCAACGCCAAGCTGGCGGGCAAGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: ESKDVQSYQQLG*KSTPSWRARAG
Trigger: ACCAGCCCTTGCCCGCCAGCTTGGCGTTGACTTTCAGCCTAATTGCTGATAGGACTGGACGTCTTTGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS TCA 72 bp GAAGCTGCGCCTGGATTTCTCCAGGCTTTCTCCGTGTaGGGCATCTTTTTCCCTTACAGAGCCGCTGTGCAT +
Preference number: 6 (lower is better)
Translates to: EAAPGFLQAFSV*GIFFPYRAAVH
Trigger: ATGCACAGCGGCTCTGTAAGGGAAAAAGATGCCTCACACGGAGAAAGCCTGGAGAAATCCAGGCGCAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS GCA 72 bp CCTTGCCTGCAGGCGGGGGACGATCAAATGAACGTGTaGGATTCCTGCACTCTGTGGTGCACAGTATCATTA +
Preference number: 6 (lower is better)
Translates to: PCLQAGDDQMNV*DSCTLWCTVSL
Trigger: TAATGATACTGTGCACCACAGAGTGCAGGAATCGCACACGTTCATTTGATCGTCCCCCGCCTGCAGGCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS GCA 72 bp GGCTCCAGAGGCCACACTCTTCAGAGGCAGGTCGCCTaGTTTCCTAAAATCTCCCCTAGGGATTCAATCCAA +
Preference number: 6 (lower is better)
Translates to: GSRGHTLQRQVA*FPKISPRDSIQ
Trigger: TTGGATTGAATCCCTAGGGGAGATTTTAGGAAAGCAGGCGACCTGCCTCTGAAGAGTGTGGCCTCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567557.1
CDS GCA 72 bp TGGCTCTGGAATGCTCCTGCACAGATAAGGCCTCTGTaGCAGCCTGCTGTCTATACAGACAGTGTGATGTGC +
Preference number: 6 (lower is better)
Translates to: WLWNAPAQIRPL*QPAVYTDSVMC
Trigger: GCACATCACACTGTCTGTATAGACAGCAGGCTGGCACAGAGGCCTTATCTGTGCAGGAGCATTCCAGAGCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CCA 72 bp AGCAGTCCTTCTGTCGGTGACTGTCATCCAAGCAATTaGAGTCCCCATACAGTACAATCCGGCCTCCACCCT +
Preference number: 6 (lower is better)
Translates to: SSPSVGDCHPSN*SPHTVQSGLHP
Trigger: AGGGTGGAGGCCGGATTGTACTGTATGGGGACTCCAATTGCTTGGATGACAGTCACCGACAGAAGGACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS CCA 72 bp AACTTAGACCCGAAGAAGACAGAGAGGTTGATACGCTaGCAACAGCAGCACAGAGCTTGGGAGGACACCGGA +
Preference number: 6 (lower is better)
Translates to: NLDPKKTERLIR*QQQHRAWEDTG
Trigger: TCCGGTGTCCTCCCAAGCTCTGTGCTGCTGTTGCCAGCGTATCAACCTCTCTGTCTTCTTCGGGTCTAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CCA 72 bp GTAGGAGAAGGCAACTTCAATGTTGTCTCCGTTCTGTaGCAAATAGGGCTGCCAGTCAGGCTTGCCTGTGGC +
Preference number: 6 (lower is better)
Translates to: VGEGNFNVVSVL*QIGLPVRLACG
Trigger: GCCACAGGCAAGCCTGACTGGCAGCCCTATTTGCCACAGAACGGAGACAACATTGAAGTTGCCTTCTCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564643.1
ENST00000569770.5
CDS CAA 72 bp GTGCCATGGCCCAACCCATCGTCCAGCGTTCGCTCGTaGGTCCAGTTGGTTCTCTCCTTCACATTTTTGAAG +
Preference number: 6 (lower is better)
Translates to: VPWPNPSSSVRS*VQLVLSFTFLK
Trigger: CTTCAAAAATGTGAAGGAGAGAACCAACTGGACCAACGAGCGAACGCTGGACGATGGGTTGGGCCATGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS CAA 90 bp ACTCGTTCAGGCCAATACAACTTAGACCCGAAGAAGACAGAGAGGTaGATACGCTGGCAACAGCAGCACAGAGCTTGGGAGGACACCGGA +
Preference number: 6 (lower is better)
Translates to: TRSGQYNLDPKKTER*IRWQQQHRAWEDTG
Trigger: TCCGGTGTCCTCCCAAGCTCTGTGCTGCTGTTGCCAGCGTATCAACCTCTCTGTCTTCTTCGGGTCTAAGTTGTATTGGCCTGAACGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS TCA 72 bp GACGCCATCTTCTGGAAACTTCGCGATGCTGCACCCTaGCGCATAATACATGTCATGGTTGGCCAGGGTGAA +
Preference number: 6 (lower is better)
Translates to: DAIFWKLRDAAP*RIIHVMVGQGE
Trigger: TTCACCCTGGCCAACCATGACATGTATTATGCGTCAGGGTGCAGCATCGCGAAGTTTCCAGAAGATGGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS TCA 72 bp ATTAAGCTATCCTCCATGAGCCGCAGGAGCCACGCCTaGTTGGTTCCTCCCGGACAATGTGTGTTTCCATTG +
Preference number: 6 (lower is better)
Translates to: IKLSSMSRRSHA*LVPPGQCVFPL
Trigger: CAATGGAAACACACATTGTCCGGGAGGAACCAATCAGGCGTGGCTCCTGCGGCTCATGGAGGATAGCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 72 bp AGACTCCCACTCGATACTCCCAGCTCGGCAACTGCCTaGATGCCAATGAGCACTCATTATAACCCGCCCTAT +
Preference number: 6 (lower is better)
Translates to: RLPLDTPSSATA*MPMSTHYNPPY
Trigger: ATAGGGCGGGTTATAATGAGTGCTCATTGGCATTCAGGCAGTTGCCGAGCTGGGAGTATCGAGTGGGAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS GCA 72 bp CTGTGCCAGCCTGCTGTCTATACAGACAGTGTGATGTaGAGGGACACCTCTGCTTTTGCAAGTCTGGAGCTT +
Preference number: 6 (lower is better)
Translates to: LCQPAVYTDSVM*RDTSAFASLEL
Trigger: AAGCTCCAGACTTGCAAAAGCAGAGGTGTCCCTGCACATCACACTGTCTGTATAGACAGCAGGCTGGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CCA 72 bp TGCAGGGACACCTCTGCTTTTGCAAGTCTGGAGCTTTaGGAGTTGTCACTGGCAGAGAATGAGTACGTGACC +
Preference number: 6 (lower is better)
Translates to: CRDTSAFASLEL*ELSLAENEYVT
Trigger: GGTCACGTACTCATTCTCTGCCAGTGACAACTCCCAAAGCTCCAGACTTGCAAAAGCAGAGGTGTCCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CAA 72 bp CGTGATGATTGCCACTTCTGGCTCCACCGGGTTTCATaGCAGGGTACTGTGGGGTCAGATTCAGCATACTTG +
Preference number: 6 (lower is better)
Translates to: RDDCHFWLHRVS*QGTVGSDSAYL
Trigger: CAAGTATGCTGAATCTGACCCCACAGTACCCTGCAATGAAACCCGGTGGAGCCAGAAGTGGCAATCATCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS CAA 72 bp GGCCAATACAACTTAGACCCGAAGAAGACAGAGAGGTaGATACGCTGGCAACAGCAGCACAGAGCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: GQYNLDPKKTER*IRWQQQHRAWE
Trigger: CTCCCAAGCTCTGTGCTGCTGTTGCCAGCGTATCAACCTCTCTGTCTTCTTCGGGTCTAAGTTGTATTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CAA 72 bp GACACCTCTGCTTTTGCAAGTCTGGAGCTTTGGGAGTaGTCACTGGCAGAGAATGAGTACGTGACCAGCCCT +
Preference number: 6 (lower is better)
Translates to: DTSAFASLELWE*SLAENEYVTSP
Trigger: AGGGCTGGTCACGTACTCATTCTCTGCCAGTGACAACTCCCAAAGCTCCAGACTTGCAAAAGCAGAGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS TCA 72 bp TCTCCCAAATGGGCCTCCAGAACCTTGGAGTACCGATaGAGATGGTTTCCTTCCATCCTCTCTGGAGTGACT +
Preference number: 6 (lower is better)
Translates to: SPKWASRTLEYR*RWFPSILSGVT
Trigger: AGTCACTCCAGAGAGGATGGAAGGAAACCATCTTCATCGGTACTCCAAGGTTCTGGAGGCCCATTTGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343411.8
ENST00000564049.1
ENST00000570064.5
CDS TCA 72 bp GCTGCATGGGACCTGGCAAGTGCTCTAGAATGTTGGTaGTTCTTCCTGAAGATCTGTAGGAGCCACTGTCCT +
Preference number: 6 (lower is better)
Translates to: AAWDLASALECW*FFLKICRSHCP
Trigger: AGGACAGTGGCTCCTACAGATCTTCAGGAAGAATCACCAACATTCTAGAGCACTTGCCAGGTCCCATGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 72 bp AACAGGTGCTTGTCTGGCACAGCCTGCATGAGAGAATaGGTGCACACTCATCTCTGTACCCAATCCAGGACT +
Preference number: 6 (lower is better)
Translates to: NRCLSGTACMRE*VHTHLCTQSRT
Trigger: AGTCCTGGATTGGGTACAGAGATGAGTGTGCACTCATTCTCTCATGCAGGCTGTGCCAGACAAGCACCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564643.1
CDS GCA 72 bp ACAGCAACTCTTACATTAGCACCTGTATATCCCATCTaGCAGAGCACATCTGCCTGCAGTGTCTGGGCAACC +
Preference number: 6 (lower is better)
Translates to: TATLTLAPVYPI*QSTSACSVWAT
Trigger: GGTTGCCCAGACACTGCAGGCAGATGTGCTCTGGCAGATGGGATATACAGGTGCTAATGTAAGAGTTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 72 bp GCAAAGGAAAAAGGAGGGCCTTATTATGAGTCTGTCTaGTTTCCCACAACACAGCACAGAGCCCCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: AKEKGGPYYESV*FPTTQHRAPVL
Trigger: GAGCACAGGGGCTCTGTGCTGTGTTGTGGGAAAGCAGACAGACTCATAATAAGGCCCTCCTTTTTCCTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS CCA 72 bp GTAGGAGAAGGCAACTTCAATGTTGTCTCCGTTCTGTaGCAAATAGGGCTGCCAGTCAGGCTGGAGGAACAT +
Preference number: 6 (lower is better)
Translates to: VGEGNFNVVSVL*QIGLPVRLEEH
Trigger: ATGTTCCTCCAGCCTGACTGGCAGCCCTATTTGCCACAGAACGGAGACAACATTGAAGTTGCCTTCTCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568051.1
CDS TCA 72 bp TCTCCCAAATGGGCCTCCAGAACCTTGGAGTACCGATaGAGATGGTTTCCTGTGGTTAGCAGCAACATCAAC +
Preference number: 6 (lower is better)
Translates to: SPKWASRTLEYR*RWFPVVSSNIN
Trigger: GTTGATGTTGCTGCTAACCACAGGAAACCATCTTCATCGGTACTCCAAGGTTCTGGAGGCCCATTTGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561936.1
ENST00000562886.1
CDS TCA 72 bp TCCCGGACAATGTGTGTTTCCATTGCTGAAGGTGGGTaGGAAAATCAGAACCGTTCCCTTGAAGATGGGCAG +
Preference number: 6 (lower is better)
Translates to: SRTMCVSIAEGG*ENQNRSLEDGQ
Trigger: CTGCCCATCTTCAAGGGAACGGTTCTGATTTTCTCACCCACCTTCAGCAATGGAAACACACATTGTCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 72 bp AAACTCAAGACAGAGCAAGTGATCTACGGGGAGATGTaGAATGCCATTTGCGTCCACGGCCACCTAAATGCC +
Preference number: 6 (lower is better)
Translates to: KLKTEQVIYGEM*NAICVHGHLNA
Trigger: GGCATTTAGGTGGCCGTGGACGCAAATGGCATTTCACATCTCCCCGTAGATCACTTGCTCTGTCTTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS TCA 72 bp AACCAACGTCCAATGGGGTTGATCAATCAACCACTGTaGGCCAATCTGGGGCCACAACACCAGCAAGTAGAA +
Preference number: 6 (lower is better)
Translates to: NQRPMGLINQPL*ANLGPQHQQVE
Trigger: TTCTACTTGCTGGTGTTGTGGCCCCAGATTGGCTCACAGTGGTTGATTGATCAACCCCATTGGACGTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567557.1
ENST00000569907.5
CDS GCA 72 bp TTATCACGACGCCATCTTCTGGAAACTTCGCGATGCTaGACCCTGACGCATAATACATGTCATGGTTGGCCA +
Preference number: 6 (lower is better)
Translates to: LSRRHLLETSRC*TLTHNTCHGWP
Trigger: TGGCCAACCATGACATGTATTATGCGTCAGGGTGCAGCATCGCGAAGTTTCCAGAAGATGGCGTCGTGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS GCA 72 bp GTGTTATCACGACGCCATCTTCTGGAAACTTCGCGATaGTGCACCCTGACGCATAATACATGTCATGGTTGG +
Preference number: 6 (lower is better)
Translates to: VLSRRHLLETSR*CTLTHNTCHGW
Trigger: CCAACCATGACATGTATTATGCGTCAGGGTGCAGCATCGCGAAGTTTCCAGAAGATGGCGTCGTGATAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS GCA 72 bp CCAACATGTTCCAGATTCCCCTATTCTCATAAGACATaGATTCTCAGTGGCCCAGCCCAGCCAGATAAGCAC +
Preference number: 6 (lower is better)
Translates to: PTCSRFPYSHKT*ILSGPAQPDKH
Trigger: GTGCTTATCTGGCTGGGCTGGGCCACTGAGAATGCATGTCTTATGAGAATAGGGGAATCTGGAACATGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS GCA 72 bp AAGATCACATCAGTAAGCGAAAGCAGCTACCAGTTCTaGCAGCAGCACCCTGTAGAAGCAGCAGCAAAACCT +
Preference number: 6 (lower is better)
Translates to: KITSVSESSYQF*QQHPVEAAAKP
Trigger: AGGTTTTGCTGCTGCTTCTACAGGGTGCTGCTGGCAGAACTGGTAGCTGCTTTCGCTTACTGATGTGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562788.2
CDS GCA 72 bp CAGGCGGGGGACGATCAAATGAACGTGTGCGATTCCTaGACTCTGTGGTGCACAGTATCATTATTAACTCTG +
Preference number: 6 (lower is better)
Translates to: QAGDDQMNVCDS*TLWCTVSLLTL
Trigger: CAGAGTTAATAATGATACTGTGCACCACAGAGTGCAGGAATCGCACACGTTCATTTGATCGTCCCCCGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CCA 72 bp GCAATGGTGATTCCAGAACCACTGCATATAAGGAAGTaGGCAAACTGGTGCCGGGAACCAGACAGCATCTTT +
Preference number: 6 (lower is better)
Translates to: AMVIPEPLHIRK*ANWCREPDSIF
Trigger: AAAGATGCTGTCTGGTTCCCGGCACCAGTTTGCCCACTTCCTTATATGCAGTGGTTCTGGAATCACCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CCA 72 bp CCTGCAGTCTTGTTTAGTATCCAACAGGTGCTTGTCTaGCACAGCCTGCATGAGAGAATGAGTGCACACTCA +
Preference number: 6 (lower is better)
Translates to: PAVLFSIQQVLV*HSLHERMSAHS
Trigger: TGAGTGTGCACTCATTCTCTCATGCAGGCTGTGCCAGACAAGCACCTGTTGGATACTAAACAAGACTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564643.1
CDS CAA 72 bp CTAACCTACAAACGTGCACACAAGAGGCCTGCAGTCTaGTTTAGTATCCAACAGGTGCTTGTCTGGCACAGC +
Preference number: 6 (lower is better)
Translates to: LTYKRAHKRPAV*FSIQQVLVWHS
Trigger: GCTGTGCCAGACAAGCACCTGTTGGATACTAAACAAGACTGCAGGCCTCTTGTGTGCACGTTTGTAGGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564643.1
CDS CAA 90 bp GTGTTTCCATTGCTGAAGGTGGGTGAGAAAATCAGAACCGTTCCCTaGAAGATGGGCAGATGTGTGCACAGCACTGGCTGGTCAAACTTT +
Preference number: 6 (lower is better)
Translates to: VFPLLKVGEKIRTVP*KMGRCVHSTGWSNF
Trigger: AAAGTTTGACCAGCCAGTGCTGTGCACACATCTGCCCATCTTCAAGGGAACGGTTCTGATTTTCTCACCCACCTTCAGCAATGGAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 72 bp AACCAACGTCCAATGGGGTTGATCAATCAACCACTGTaGGCCAATAGTGGAGAAGCTCCACCAAGTTGTCCA +
Preference number: 6 (lower is better)
Translates to: NQRPMGLINQPL*ANSGEAPPSCP
Trigger: TGGACAACTTGGTGGAGCTTCTCCACTATTGGCTCACAGTGGTTGATTGATCAACCCCATTGGACGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564444.1
CDS TCA 72 bp AACATCTATTTTCACAGGATTACTGAGAGGGGACAGTaGGGTAATCCATGGGAGCATCCCAGCCTGCTGCAT +
Preference number: 6 (lower is better)
Translates to: NIYFHRITERGQ*GNPWEHPSLLH
Trigger: ATGCAGCAGGCTGGGATGCTCCCATGGATTACCTCACTGTCCCCTCTCAGTAATCCTGTGAAAATAGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562886.1
CDS TCA 72 bp AAACTGGTGCCGGGAACCAGACAGCATCTTTGTCTCTaGAGAAACCACTGTCTCCAGGGAGAATACGAAACA +
Preference number: 6 (lower is better)
Translates to: KLVPGTRQHLCL*RNHCLQGEYET
Trigger: TGTTTCGTATTCTCCCTGGAGACAGTGGTTTCTTCAGAGACAAAGATGCTGTCTGGTTCCCGGCACCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS TCA 72 bp GTAAACACAACCAAAGATACCCACCCCACAAAGAACTaGAGTGCACATTACACAAGGCGCCCGTTTTACCCC +
Preference number: 6 (lower is better)
Translates to: VNTTKDTHPTKN*SAHYTRRPFYP
Trigger: GGGGTAAAACGGGCGCCTTGTGTAATGTGCACTTCAGTTCTTTGTGGGGTGGGTATCTTTGGTTGTGTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568051.1
CDS CCA 72 bp ATTCCAGAACCACTGCATATAAGGAAGTGGGCAAACTaGTGCCGGGAACCAGACAGCATCTTTGTCTCTGAA +
Preference number: 6 (lower is better)
Translates to: IPEPLHIRKWAN*CREPDSIFVSE
Trigger: TTCAGAGACAAAGATGCTGTCTGGTTCCCGGCACCAGTTTGCCCACTTCCTTATATGCAGTGGTTCTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS TCA 72 bp CTCCATTTGTACCACAGAACCAACGTCCAATGGGGTTaGTCAATCAACCACTGTGAGCCAATAGTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: LHLYHRTNVQWG*SINHCEPIVEK
Trigger: CTTCTCCACTATTGGCTCACAGTGGTTGATTGATCAACCCCATTGGACGTTGGTTCTGTGGTACAAATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564444.1
CDS GCA 72 bp TACTGGCGGGATTCACCAGCTCACGCTTCTGGACTGTaGTGGAGGAAAAATCAAGAATTGCCTATTTTCTCT +
Preference number: 6 (lower is better)
Translates to: YWRDSPAHASGL*WRKNQELPIFS
Trigger: AGAGAAAATAGGCAATTCTTGATTTTTCCTCCAGCACAGTCCAGAAGCGTGAGCTGGTGAATCCCGCCAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564643.1
CDS GCA 72 bp GGCATCTTTTTCCCTTACAGAGCCGCTGTGCATCCTTaGTGTGCCACTATAATGAATCTTAGCTGGGAGTAT +
Preference number: 6 (lower is better)
Translates to: GIFFPYRAAVHP*CATIMNLSWEY
Trigger: ATACTCCCAGCTAAGATTCATTATAGTGGCACAGCAAGGATGCACAGCGGCTCTGTAAGGGAAAAAGATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CCA 72 bp GTAGGAGAAGGCAACTTCAATGTTGTCTCCGTTCTGTaGCAAATAGGGCTGCCAGTCAGGCTTATCTACAAT +
Preference number: 6 (lower is better)
Translates to: VGEGNFNVVSVL*QIGLPVRLIYN
Trigger: ATTGTAGATAAGCCTGACTGGCAGCCCTATTTGCCACAGAACGGAGACAACATTGAAGTTGCCTTCTCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS CAA 72 bp CCACAGAGCAAAACCACGAGCAGAAGCAGCCAGATGTaGACAAGCTTCATGGTCACAAGCGAATATGATCAT +
Preference number: 6 (lower is better)
Translates to: PQSKTTSRSSQM*TSFMVTSEYDH
Trigger: ATGATCATATTCGCTTGTGACCATGAAGCTTGTCAACATCTGGCTGCTTCTGCTCGTGGTTTTGCTCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS TCA 72 bp CACAGAGCAAAACCACGAGCAGAAGCAGCCAGATGTTaGCAAGCTTCATGGTCACAAGCGAATATGATCATA +
Preference number: 6 (lower is better)
Translates to: HRAKPRAEAARC*QASWSQANMII
Trigger: TATGATCATATTCGCTTGTGACCATGAAGCTTGTCAACATCTGGCTGCTTCTGCTCGTGGTTTTGCTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000569907.5
CDS TCA 72 bp AGTAGCCCATGCTTCTCAGATGCTGGTACATATCCCTaGAATTGGTGTGGATGTGATCACCATTCCAGTCTA +
Preference number: 6 (lower is better)
Translates to: SSPCFSDAGTYP*NWCGCDHHSSL
Trigger: TAGACTGGAATGGTGATCACATCCACACCAATTTCAGGGATATGTACCAGCATCTGAGAAGCATGGGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS TCA 72 bp CATTACACAAGGCGCCCGTTTTACCCCCATCTAAGCTaGAAGCTGAAAGATGTACCACCTAGAATAGCCAAA +
Preference number: 6 (lower is better)
Translates to: HYTRRPFYPHLS*KLKDVPPRIAK
Trigger: TTTGGCTATTCTAGGTGGTACATCTTTCAGCTTTCAGCTTAGATGGGGGTAAAACGGGCGCCTTGTGTAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568051.1
CDS GCA 72 bp CTCCTGGTCTCAAATCTCTTTTGGAGACTCAGAATATaGGTCGATCTAGGTCTCTGGGGACCGAGAATAATT +
Preference number: 6 (lower is better)
Translates to: LLVSNLFWRLRI*VDLGLWGPRII
Trigger: AATTATTCTCGGTCCCCAGAGACCTAGATCGACGCATATTCTGAGTCTCCAAAAGAGATTTGAGACCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CCA 72 bp ATTGGTAAAGACCCTGAAAATGTGAAGTTCTGCATCTaGAGCAAATCCTTGGCACTCCCTCATGCTGGCTAT +
Preference number: 6 (lower is better)
Translates to: IGKDPENVKFCI*SKSLALPHAGY
Trigger: ATAGCCAGCATGAGGGAGTGCCAAGGATTTGCTCCAGATGCAGAACTTCACATTTTCAGGGTCTTTACCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343411.8
ENST00000569770.5
ENST00000570012.1
CDS CCA 72 bp AGTCTAAAGGGTCATTCTTCATCCTTAAATTATCCCTaGGGAAATAGCCAGGTGGATAGCGGAGGTTGTGGT +
Preference number: 6 (lower is better)
Translates to: SLKGHSSSLNYP*GNSQVDSGGCG
Trigger: ACCACAACCTCCGCTATCCACCTGGCTATTTCCCCAGGGATAATTTAAGGATGAAGAATGACCCTTTAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS CCA 72 bp CTCCACCCTCAGCTGGAATCTGATAAAGTCCCAAAATaGGGACGTTTTCAACAACTGCTGTTTCCTGCTTTA +
Preference number: 6 (lower is better)
Translates to: LHPQLESDKVPK*GRFQQLLFPAL
Trigger: TAAAGCAGGAAACAGCAGTTGTTGAAAACGTCCCCATTTTGGGACTTTATCAGATTCCAGCTGAGGGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343411.8
ENST00000570064.5
CDS CCA 72 bp ATCGAAAGTTGGGTAACACCACCTTGTCCAGGTCAATaGAGAGTAGCTTCTGATGTTTCCAAAGGTTACTGG +
Preference number: 6 (lower is better)
Translates to: IESWVTPPCPGQ*RVASDVSKGYW
Trigger: CCAGTAACCTTTGGAAACATCAGAAGCTACTCTCCATTGACCTGGACAAGGTGGTGTTACCCAACTTTCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343411.8
ENST00000562886.1
ENST00000570064.5
CDS CAA 72 bp AGATTCAGCATACTTGAGGGAACGAAAGACTTTTCGTaGGGGCGTGACCCGTTTGATGTTTGGATGATCTTC +
Preference number: 6 (lower is better)
Translates to: RFSILEGTKDFS*GRDPFDVWMIF
Trigger: GAAGATCATCCAAACATCAAACGGGTCACGCCCCAACGAAAAGTCTTTCGTTCCCTCAAGTATGCTGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS GCA 72 bp TTGAAGAAAAGCGGGCGATGTTATCTTCAAAGTCAATaGCGCCTACTCCAATCACATCCATTTGATCAGCAG +
Preference number: 6 (lower is better)
Translates to: LKKSGRCYLQSQ*RLLQSHPFDQQ
Trigger: CTGCTGATCAAATGGATGTGATTGGAGTAGGCGGCATTGACTTTGAAGATAACATCGCCCGCTTTTCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343411.8
ENST00000563231.5
ENST00000565863.1
ENST00000569770.5
ENST00000570012.1
CDS CCA 72 bp CAAATTCCAGGAGCTGTCCATTATCAACATGCTGGATaGGCCGGTTCAGTATGTGATGGATTATTTGATGTG +
Preference number: 6 (lower is better)
Translates to: QIPGAVHYQHAG*AGSVCDGLFDV
Trigger: CACATCAAATAATCCATCACATACTGAACCGGCCCATCCAGCATGTTGATAATGGACAGCTCCTGGAATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CCA 72 bp GACGATCAAATGAACGTGTGCGATTCCTGCACTCTGTaGTGCACAGTATCATTATTAACTCTGGGATCTGAA +
Preference number: 6 (lower is better)
Translates to: DDQMNVCDSCTL*CTVSLLTLGSE
Trigger: TTCAGATCCCAGAGTTAATAATGATACTGTGCACCACAGAGTGCAGGAATCGCACACGTTCATTTGATCGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CCA 72 bp ATCGAAAGTTGGGTAACACCACCTTGTCCAGGTCAATaGAGAGTAGCTTCTGATGTTTCCAAAGGTTACTTC +
Preference number: 6 (lower is better)
Translates to: IESWVTPPCPGQ*RVASDVSKGYF
Trigger: GAAGTAACCTTTGGAAACATCAGAAGCTACTCTCCATTGACCTGGACAAGGTGGTGTTACCCAACTTTCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CAA 72 bp TTCAAAGTCAATGCCGCCTACTCCAATCACATCCATTaGATCAGCAGGGTTATTCAGAGTGCCATAAAGAGG +
Preference number: 6 (lower is better)
Translates to: FKVNAAYSNHIH*ISRVIQSAIKR
Trigger: CCTCTTTATGGCACTCTGAATAACCCTGCTGATCAAATGGATGTGATTGGAGTAGGCGGCATTGACTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343411.8
ENST00000563231.5
ENST00000565863.1
ENST00000569770.5
ENST00000570012.1
CDS CAA 90 bp TGTTTCTTCCCACAGAGCAAAACCACGAGCAGAAGCAGCCAGATGTaGACAAGCTTCATGGTCACAAGCGAATATGATCATAAAATTGCA +
Preference number: 6 (lower is better)
Translates to: CFFPQSKTTSRSSQM*TSFMVTSEYDHKIA
Trigger: TGCAATTTTATGATCATATTCGCTTGTGACCATGAAGCTTGTCAACATCTGGCTGCTTCTGCTCGTGGTTTTGCTCTGTGGGAAGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS CAA 90 bp GATGTTATCTTCAAAGTCAATGCCGCCTACTCCAATCACATCCATTaGATCAGCAGGGTTATTCAGAGTGCCATAAAGAGGTCCGTCATT +
Preference number: 6 (lower is better)
Translates to: DVIFKVNAAYSNHIH*ISRVIQSAIKRSVI
Trigger: AATGACGGACCTCTTTATGGCACTCTGAATAACCCTGCTGATCAAATGGATGTGATTGGAGTAGGCGGCATTGACTTTGAAGATAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343411.8
ENST00000563231.5
ENST00000565863.1
ENST00000569770.5
ENST00000570012.1
CDS TCA 72 bp TCTGTGGTGCACAGTATCATTATTAACTCTGGGATCTaGAAAACTCGTTCAGGCCAATACAACTTAGACCCG +
Preference number: 6 (lower is better)
Translates to: SVVHSIIINSGI*KTRSGQYNLDP
Trigger: CGGGTCTAAGTTGTATTGGCCTGAACGAGTTTTTCAGATCCCAGAGTTAATAATGATACTGTGCACCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS TCA 72 bp AACACCACCTTGTCCAGGTCAATGGAGAGTAGCTTCTaGTGTTTCCAAAGGTTACTTCAGGAAAATGGATTA +
Preference number: 6 (lower is better)
Translates to: NTTLSRSMESSF*CFQRLLQENGL
Trigger: TAATCCATTTTCCTGAAGTAACCTTTGGAAACATCAGAAGCTACTCTCCATTGACCTGGACAAGGTGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS GCA 72 bp GATCAAATGAACGTGTGCGATTCCTGCACTCTGTGGTaGACAGTATCATTATTAACTCTGGGATCTGAAAAA +
Preference number: 6 (lower is better)
Translates to: DQMNVCDSCTLW*TVSLLTLGSEK
Trigger: TTTTTCAGATCCCAGAGTTAATAATGATACTGTGCACCACAGAGTGCAGGAATCGCACACGTTCATTTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS CCA 72 bp CTGAATCACCTCAAAATCACTAGGGTAGTCACTGGATaGATTGTTTCGAGGTATAATTCTCCAATTGTCTAC +
Preference number: 6 (lower is better)
Translates to: LNHLKITRVVTG*IVSRYNSPIVY
Trigger: GTAGACAATTGGAGAATTATACCTCGAAACAATCCATCCAGTGACTACCCTAGTGATTTTGAGGTGATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS CAA 72 bp TCACTGGATGGATTGTTTCGAGGTATAATTCTCCAATaGTCTACTTCACTGCTCTTCAGGGCACTTGAAATA +
Preference number: 6 (lower is better)
Translates to: SLDGLFRGIILQ*STSLLFRALEI
Trigger: TATTTCAAGTGCCCTGAAGAGCAGTGAAGTAGACAATTGGAGAATTATACCTCGAAACAATCCATCCAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8
CDS CAA 72 bp GGTGAATTTCTCTATGACAGGGCGATCATGTTAGGATaGATAGAGAAAATCCCAATTCCAGGAGAAAAATGG +
Preference number: 6 (lower is better)
Translates to: GEFLYDRAIMLG*IEKIPIPGEKW
Trigger: CCATTTTTCTCCTGGAATTGGGATTTTCTCTATCAATCCTAACATGATCGCCCTGTCATAGAGAAATTCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568051.1
CDS TCA 72 bp GGTTTAACACGTCGATCTTCTTTAAAATGGCATAGTTaGAGGCGTCCAAAAACCAAGATGTGTAAGATACCT +
Preference number: 6 (lower is better)
Translates to: GLTRRSSLKWHS*RRPKTKMCKIP
Trigger: AGGTATCTTACACATCTTGGTTTTTGGACGCCTTCAACTATGCCATTTTAAAGAAGATCGACGTGTTAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343411.8
ENST00000569770.5
ENST00000570012.1
CDS TCA 72 bp AAGATCAAAATCAAGTCCCTGTTCATGAGATTCTACTaGGTTTACAATATGACCAGCAGGAGCCTGTTTTTG +
Preference number: 6 (lower is better)
Translates to: KIKIKSLFMRFY*VYNMTSRSLFL
Trigger: CAAAAACAGGCTCCTGCTGGTCATATTGTAAACTCAGTAGAATCTCATGAACAGGGACTTGATTTTGATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562906.2
CDS TCA 72 bp GACACTCAGTCAGATCTATGTAGCTGGGGCTCAAACTaGAATAAAGAATACAGTGTTAGAGTAGATCATATG +
Preference number: 6 (lower is better)
Translates to: DTQSDLCSWGSN*NKEYSVRVDHM
Trigger: CATATGATCTACTCTAACACTGTATTCTTTATTTCAGTTTGAGCCCCAGCTACATAGATCTGACTGAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570064.5
CDS CAA 90 bp ACTTCACTGCTCTTCAGGGCACTTGAAATAAATGAATTTCTAGCTTaGGCTGTAAAGTATCCATTGAAAGCCACAATATATTCATATTCC +
Preference number: 6 (lower is better)
Translates to: TSLLFRALEINEFLA*AVKYPLKATIYSYS
Trigger: GGAATATGAATATATTGTGGCTTTCAATGGATACTTTACAGCCAAAGCTAGAAATTCATTTATTTCAAGTGCCCTGAAGAGCAGTGAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343411.8