Pregenerated sensors for MARCOL (Homo sapiens)
Ensembl gene IDs: ENSG00000248109Ensembl transcript IDs: ENST00000513133.2, ENST00000637618.1, ENST00000638059.1, ENST00000638089.2
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 72 bp | GCTCAGCTTCACCAAGGCTTTTGGTGCGCTGGGAGCTaGAGGCACCCAGCACTTGTCCTCCCAAAGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: AQLHQGFWCAGS*RHPALVLPKAK Trigger: CTTTGCCTTTGGGAGGACAAGTGCTGGGTGCCTGCAGCTCCCAGCGCACCAAAAGCCTTGGTGAAGCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638059.1 |
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| CDS CCA 72 bp | CTCAGAAAAGCACGAACTTGGGAGTGTTACTGTCATTaGCTTCATCTTCTCAAGGACATCACGGTTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: LRKARTWECYCH*LHLLKDITVPS Trigger: GGATGGAACCGTGATGTCCTTGAGAAGATGAAGCCAATGACAGTAACACTCCCAAGTTCGTGCTTTTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637618.1 |
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| CDS CAA 72 bp | GCTCAGAAAAGCACGAACTTGGGAGTGTTACTGTCATaGGCTTCATCTTCTCAAGGACATCACGGTTCCATC | + |
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Preference number: 6 (lower is better) Translates to: AQKSTNLGVLLS*ASSSQGHHGSI Trigger: GATGGAACCGTGATGTCCTTGAGAAGATGAAGCCAATGACAGTAACACTCCCAAGTTCGTGCTTTTCTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637618.1 |
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| CDS CCA 72 bp | GGCAGTAGGAAATGTAAGCTCAGAAAAGCACGAACTTaGGAGTGTTACTGTCATTGGCTTCATCTTCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: GSRKCKLRKART*ECYCHWLHLLK Trigger: CTTGAGAAGATGAAGCCAATGACAGTAACACTCCCAAGTTCGTGCTTTTCTGAGCTTACATTTCCTACTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637618.1 |
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| CDS CCA 72 bp | AAAATAGCCTGGTTGTCCTTGAAGCCTAAACGTTCCTaGATTTCCTTGTGTATAACTACCTCCTTGCTTATT | + |
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Preference number: 6 (lower is better) Translates to: KIAWLSLKPKRS*ISLCITTSLLI Trigger: AATAAGCAAGGAGGTAGTTATACACAAGGAAATCCAGGAACGTTTAGGCTTCAAGGACAACCAGGCTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000513133.2 ENST00000637618.1 ENST00000638059.1 ENST00000638089.2 |
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| CDS CAA 72 bp | ATCAAGTCATCATCTTCCAATTTGCGTATGTTAGACTaGCCTCCAGTAGAGCATTGTTTCAGAGAGCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: IKSSSSNLRMLD*PPVEHCFRELS Trigger: TGAAAGCTCTCTGAAACAATGCTCTACTGGAGGCAAGTCTAACATACGCAAATTGGAAGATGATGACTTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638059.1 |
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| CDS CAA 90 bp | ATAATTACAATCAAGTCATCATCTTCCAATTTGCGTATGTTAGACTaGCCTCCAGTAGAGCATTGTTTCAGAGAGCTTTCACTATGCAGT | + |
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Preference number: 6 (lower is better) Translates to: IITIKSSSSNLRMLD*PPVEHCFRELSLCS Trigger: ACTGCATAGTGAAAGCTCTCTGAAACAATGCTCTACTGGAGGCAAGTCTAACATACGCAAATTGGAAGATGATGACTTGATTGTAATTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638059.1 |
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| CDS CAA 72 bp | ATGGTGATAATTACAATCAAGTCATCATCTTCCAATTaGCGTATGTTAGACTTGCCTCCAGTAGAGCATTGT | + |
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Preference number: 6 (lower is better) Translates to: MVIITIKSSSSN*RMLDLPPVEHC Trigger: ACAATGCTCTACTGGAGGCAAGTCTAACATACGCAAATTGGAAGATGATGACTTGATTGTAATTATCACCAT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638059.1 |
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| CDS CAA 72 bp | TCCAGAATAAGTGCAGGTTTTGGATTCTCTTCTAGTTaGAAAACACTGGTATTTGAAATCTGGGTTGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SRISAGFGFSSS*KTLVFEIWVED Trigger: ATCTTCAACCCAGATTTCAAATACCAGTGTTTTCAAACTAGAAGAGAATCCAAAACCTGCACTTATTCTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000513133.2 ENST00000637618.1 ENST00000638059.1 ENST00000638089.2 |
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