RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAPK9 (Homo sapiens)

Ensembl gene IDs: ENSG00000050748

Ensembl transcript IDs: ENST00000343111.10, ENST00000347470.8, ENST00000393360.7, ENST00000393362.8, ENST00000397072.7, ENST00000425491.6, ENST00000452135.7, ENST00000455781.5, ENST00000520212.6, ENST00000523135.1, ENST00000523583.1, ENST00000524170.5, ENST00000539014.5

Found 640 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGGAGCGAGTaGGCAGAAGGGCGTCTGCGGGTGCCTCGTCCCCCGTCCACGTCT +
Preference number: 1 (lower is better)
Translates to: APSVASGSLNAQRSE*AEGRLRVPRPPSTS
Trigger: AGACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCACTCGCTCCTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR GCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATaGACAGAGGAGCGAGTGAGCAGAAGGGCGTCTGCGGGTGCCTCG +
Preference number: 1 (lower is better)
Translates to: LHTVTGSICGKWLAE*TEERVSRRASAGAS
Trigger: CGAGGCACCCGCAGACGCCCTTCTGCTCACTCGCTCCTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR TCA 90 bp AACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTaGATGCACAGAGGAGCGAGTGAGCAGAAGGGCGTCTGCGGGTGC +
Preference number: 1 (lower is better)
Translates to: NPPHRHGLHLWQVAR*MHRGASEQKGVCGC
Trigger: GCACCCGCAGACGCCCTTCTGCTCACTCGCTCCTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR TCA 90 bp ACTGGGGCTCTGCGTCTCACCTGCTCCCATCTCCAGGCCCACGGCTaGCACGGTATGCACAGCCAGGGTTTCCAGACTGCTCTCCTGCTC +
Preference number: 1 (lower is better)
Translates to: TGALRLTCSHLQAHG*HGMHSQGFQTALLL
Trigger: GAGCAGGAGAGCAGTCTGGAAACCCTGGCTGTGCATACCGTGTCAGCCGTGGGCCTGGAGATGGGAGCAGGTGAGACGCAGAGCCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR CCA 90 bp GGGTTGAAGCAGCACCCGCTCCGTGTTTCAGACACGGACTTGGGGTaGGCAAGGGGCCCTGTAAGAGGGCTTCCTCCTCTCAGTACTGGG +
Preference number: 1 (lower is better)
Translates to: GLKQHPLRVSDTDLG*ARGPVRGLPPLSTG
Trigger: CCCAGTACTGAGAGGAGGAAGCCCTCTTACAGGGCCCCTTGCCCACCCCAAGTCCGTGTCTGAAACACGGAGCGGGTGCTGCTTCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR GCA 90 bp CCAGGCCCACGGCTGACACGGTATGCACAGCCAGGGTTTCCAGACTaGTCTCCTGCTCTCACAGAACTCTGTCTGCTCTCTGGACTCTGC +
Preference number: 1 (lower is better)
Translates to: PGPRLTRYAQPGFPD*SPALTELCLLSGLC
Trigger: GCAGAGTCCAGAGAGCAGACAGAGTTCTGTGAGAGCAGGAGAGCAGTCTGGAAACCCTGGCTGTGCATACCGTGTCAGCCGTGGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR CCA 90 bp TTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTaGCTCGCTGAATGCACAGAGGAGCGAGTGAGCAGAAGGGCGTCT +
Preference number: 1 (lower is better)
Translates to: FQETLHTVTGSICGK*LAECTEERVSRRAS
Trigger: AGACGCCCTTCTGCTCACTCGCTCCTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR TCA 90 bp AGGAATGCCTCCCAACAATGGAGAGCAACAATAGCAACAGGCATCTaGATCAGCCTGGCCTCTGAAAACAGACCAAAGAGGAGTTTATCT +
Preference number: 1 (lower is better)
Translates to: RNASQQWRATIATGI*ISLASENRPKRSLS
Trigger: AGATAAACTCCTCTTTGGTCTGTTTTCAGAGGCCAGGCTGATTCAGATGCCTGTTGCTATTGTTGCTCTCCATTGTTGGGAGGCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR GCA 90 bp TCACGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATaGCTCCCAACAATGGAGAGCAACAATAGCAACAGGCATCTGAAT +
Preference number: 1 (lower is better)
Translates to: SRPLKSFPEHSCEKE*LPTMESNNSNRHLN
Trigger: ATTCAGATGCCTGTTGCTATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR TCA 90 bp TATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTaGGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGT +
Preference number: 1 (lower is better)
Translates to: YSASFYHLSRQSYQV*VGQGIVFLTCRTWS
Trigger: ACTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR TCA 90 bp CAGATCTCTGGCTTGACTTGTTTTTATTTTGTCTCGCTCAGATTCTaGTGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCC +
Preference number: 1 (lower is better)
Translates to: QISGLTCFYFVSLRF*WEYPIWKEFFKFDS
Trigger: GGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAAAACAAGTCAAGCCAGAGATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397072.7
3UTR CCA 90 bp TATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGATACTTTaGTCTGTTTTCGACATAATTCCTCACAGTTGGCTGAAGTTTCTT +
Preference number: 1 (lower is better)
Translates to: YPIWKEFFKFDSRIL*SVFDIIPHSWLKFL
Trigger: AAGAAACTTCAGCCAACTGTGAGGAATTATGTCGAAAACAGACCAAAGTATCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
3UTR TCA 90 bp GCTGATCTTTTACAACACCATTCTTGCTTCTTTCTTCCCAATCCATaGCTTCTTTGTAAATTAGCTCTTTCCATTCTTCAATTGCATGTT +
Preference number: 1 (lower is better)
Translates to: ADLLQHHSCFFLPNP*LLCKLALSILQLHV
Trigger: AACATGCAATTGAAGAATGGAAAGAGCTAATTTACAAAGAAGTCATGGATTGGGAAGAAAGAAGCAAGAATGGTGTTGTAAAAGATCAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397072.7
3UTR-3UTR TCA 90 bp GTGAGCAGAAGGGCGTCTGCGGGTGCCTCGTCCCCCGTCCACGTCTCCCGGGGAAATCAGCCTGGCCTCTaGAAACAGACCAAAGAGGAG +
Preference number: 2 (lower is better)
Translates to: VSRRASAGASSPVHVSRGNQPGL*KQTKEE
Trigger: CTCCTCTTTGGTCTGTTTTCAGAGGCCAGGCTGATT...TCCCCGGGAGACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp GTGAGCAGAAGGGCGTCTGCGGGTGCCTCGTCCCCCGTCCACGTCTCCCGGGGAGCTCCGTTCCTGCAGTaGCACTTAACATACTCAGCA +
Preference number: 2 (lower is better)
Translates to: VSRRASAGASSPVHVSRGAPFLQ*HLTYSA
Trigger: TGCTGAGTATGTTAAGTGTCACTGCAGGAACGGAGC...TCCCCGGGAGACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR GCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGGAGCAGAAGGGCGTCTaGGGGTGCCTCGTCCCCCGT +
Preference number: 2 (lower is better)
Translates to: RWPFQETLHTVTGSICGKEQKGV*GCLVPR
Trigger: ACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTC...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp GTGAGCAGAAGGGCGTCTGCGGGTGCCTCGTCCCCCGTCCACGTCTCCCGGGGATCCAACGTTAGGCCATaGATGCAGGAACCTATCTGC +
Preference number: 2 (lower is better)
Translates to: VSRRASAGASSPVHVSRGSNVRP*MQEPIC
Trigger: GCAGATAGGTTCCTGCATCCATGGCCTAACGTTGGA...TCCCCGGGAGACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp GTGAGCAGAAGGGCGTCTGCGGGTGCCTCGTCCCCCGTCCACGTCTCCCGGGGACCCAGAACATTCTTGTaGAAAGGAATGCCTCCCAAC +
Preference number: 2 (lower is better)
Translates to: VSRRASAGASSPVHVSRGPRTFL*KGMPPN
Trigger: GTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGG...TCCCCGGGAGACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp CTCGTCCCCCGTCCACGTCTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCGCATCTGAATCAGCCTaGCCTCTGAAAACAGACCAA +
Preference number: 2 (lower is better)
Translates to: LVPRPRLPGREHHTVQGSASESA*PLKTDQ
Trigger: TTGGTCTGTTTTCAGAGGCCAGGCTGATTCAGATGC...GCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAGACGTGGACGGGGGACGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR CAA 90 bp AAATGCGGGTTGAAGCAGCACCCGCTCCGTGTTTCAGACACGGACTaGGGGTGGGCAAGGGGCCCTGTAAGAGGGCTTCCTCCTCTCAGT +
Preference number: 2 (lower is better)
Translates to: KCGLKQHPLRVSDTD*GWARGPVRGLPPLS
Trigger: ACTGAGAGGAGGAAGCCCTCTTACAGGGCCCCTTGCCCACCCCAAGTCCGTGTCTGAAACACGGAGCGGGTGCTGCTTCAACCCGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp GTGAGCAGAAGGGCGTCTGCGGGTGCCTCGTCCCCCGTCCACGTCTCCCGGGGATGGATGAAATGTCATTaGTCGATGAAGACTGAGAAG +
Preference number: 2 (lower is better)
Translates to: VSRRASAGASSPVHVSRGWMKCH*SMKTEK
Trigger: CTTCTCAGTCTTCATCGATCAATGACATTTCATCCA...TCCCCGGGAGACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
3UTR-3UTR GCA 90 bp GTGAGCAGAAGGGCGTCTGCGGGTGCCTCGTCCCCCGTCCACGTCTCCCGGGGATTCACCTACTCTAACTaGTCACCTGAAATGATCTTG +
Preference number: 2 (lower is better)
Translates to: VSRRASAGASSPVHVSRGFTYSN*SPEMIL
Trigger: CAAGATCATTTCAGGTGAGCAGTTAGAGTAGGTGAA...TCCCCGGGAGACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR GCA 90 bp CTCGTCCCCCGTCCACGTCTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCTTCACCTACTCTAACTaGTCACCTGAAATGATCTTG +
Preference number: 2 (lower is better)
Translates to: LVPRPRLPGREHHTVQGSFTYSN*SPEMIL
Trigger: CAAGATCATTTCAGGTGAGCAGTTAGAGTAGGTGAA...GCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAGACGTGGACGGGGGACGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp GAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCTCCAACGTTAGGCCATaGATGCAGGAACCTATCTGC +
Preference number: 2 (lower is better)
Translates to: ETLHTVTGSICGKWLAECSNVRP*MQEPIC
Trigger: GCAGATAGGTTCCTGCATCCATGGCCTAACGTTGGA...GCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGTCCAACGTTAGGCCATaGATGCAGGAACCTATCTGC +
Preference number: 2 (lower is better)
Translates to: LHTVTGSICGKWLAECTESNVRP*MQEPIC
Trigger: GCAGATAGGTTCCTGCATCCATGGCCTAACGTTGGA...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp CTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCTCGCGCATTTTCAACCTCTTCCTTCACGTCCTCTaGAGAGTTTCCCAGAACATT +
Preference number: 2 (lower is better)
Translates to: LPGREHHTVQGSSRIFNLFLHVL*RVSQNI
Trigger: AATGTTCTGGGAAACTCTTCAGAGGACGTGAAGGAA...GAGGTTGAAAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGCCCAGAACATTCTTGTaGAAAGGAATGCCTCCCAAC +
Preference number: 2 (lower is better)
Translates to: RWPFQETLHTVTGSICGKPRTFL*KGMPPN
Trigger: GTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGG...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp CGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGCAGCACCCGCTCCAGGCAGGCAAAACGTaGTCACCACAGCTCCGTTCC +
Preference number: 2 (lower is better)
Translates to: RGYRYLHSIKCGLKQHPLQAGKT*SPQLRS
Trigger: GGAACGGAGCTGTGGTGATCACGTTTTGCCTGCCTG...GAGCGGGTGCTGCTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR GCA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGGAGCATCACACAGTaGAGGGCAGCTCGCGCATTT +
Preference number: 2 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLGSITQ*RAARAF
Trigger: AAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCC...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp GGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTCCAGCGTCTGCTCAGTaGACATGGATGAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: GGRWPFQETLHTVTGSICPASAQ*TWMKCH
Trigger: ATGACATTTCATCCATGTCCACTGAGCAGACGCTGG...ACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
3UTR-3UTR CCA 90 bp CTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCTCGCGCATTTTCAACCTCCCAAGCAAGCATTTGTaGTCACATGCACATACATCT +
Preference number: 2 (lower is better)
Translates to: LPGREHHTVQGSSRIFNLPSKHL*SHAHTS
Trigger: AGATGTATGTGCATGTGACCACAAATGCTTGCTTGG...GAGGTTGAAAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGGCATCTGAATCAGCCTaGCCTCTGAAAACAGACCAA +
Preference number: 2 (lower is better)
Translates to: RWPFQETLHTVTGSICGKASESA*PLKTDQ
Trigger: TTGGTCTGTTTTCAGAGGCCAGGCTGATTCAGATGC...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR CAA 90 bp AGACTCGTACGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTaGAAGCAGCACCCGCTCCGTGTTTCAGACACGGACTTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: RLVRGYRYLHSIKCG*KQHPLRVSDTDLGW
Trigger: CCACCCCAAGTCCGTGTCTGAAACACGGAGCGGGTGCTGCTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACGTACGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTTCCTTCACGTCCTCTaGAGAGTTTCCCAGAACATT +
Preference number: 2 (lower is better)
Translates to: RWPFQETLHTVTGSICGKFLHVL*RVSQNI
Trigger: AATGTTCTGGGAAACTCTTCAGAGGACGTGAAGGAA...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp CCTGAGGCATTAAGAAAGCATGGCGGGGCCAAGGTCGCGGGGAAGGATACGGTCCATGATGCAACCCACTaGCCAGATATCAACTCTATT +
Preference number: 2 (lower is better)
Translates to: PEALRKHGGAKVAGKDTVHDATH*PDINSI
Trigger: AATAGAGTTGATATCTGGTCAGTGGGTTGCATCATG...GACCGTATCCTTCCCCGCGACCTTGGCCCCGCCATGCTTTCTTAATGCCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539014.5
3UTR-3UTR GCA 90 bp GGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTTCTTGTGAAAAGGAATaGCTCCCAACAATGGAGAGC +
Preference number: 2 (lower is better)
Translates to: GGRWPFQETLHTVTGSICSCEKE*LPTMES
Trigger: GCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGA...ACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp GAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCCCAAGCAAGCATTTGTaGTCACATGCACATACATCT +
Preference number: 2 (lower is better)
Translates to: ETLHTVTGSICGKWLAECPSKHL*SHAHTS
Trigger: AGATGTATGTGCATGTGACCACAAATGCTTGCTTGG...GCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGAGAAAATCAAGAACGTaGTATTGGCCGAGGGAAAGT +
Preference number: 2 (lower is better)
Translates to: LHTVTGSICGKWLAECTERKSRT*YWPRES
Trigger: ACTTTCCCTCGGCCAATACCACGTTCTTGATTTTCT...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGAATGCCTCCCAACAATaGAGAGCAACAATAGCAACA +
Preference number: 2 (lower is better)
Translates to: LHTVTGSICGKWLAECTENASQQ*RATIAT
Trigger: TGTTGCTATTGTTGCTCTCCATTGTTGGGAGGCATT...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp CCTGAGGCATTAAGAAAGCATGGCGGGGCCAAGGTCGCGGGGAAGGATACGGTCGAACACAGTCTGGAGTaGATTTTACGACTTTGTCCT +
Preference number: 2 (lower is better)
Translates to: PEALRKHGGAKVAGKDTVEHSLE*ILRLCP
Trigger: AGGACAAAGTCGTAAAATCCACTCCAGACTGTGTTC...GACCGTATCCTTCCCCGCGACCTTGGCCCCGCCATGCTTTCTTAATGCCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539014.5
3UTR-3UTR CCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACACTCGCCTCTACCTGGTaGAAGATGGCCTTTCCAGGA +
Preference number: 2 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTLASTW*KMAFPG
Trigger: TCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAG...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAGGTGAGGTATTTCTGTaGAGCCCTGTGGCCTGTCCT +
Preference number: 2 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTGEVFL*SPVACP
Trigger: AGGACAGGCCACAGGGCTCCACAGAAATACCTCACC...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp CGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGCAGCACCCGCTCCTTGAAACTGAGACCTaGACATGGGGGAGACAGTCG +
Preference number: 2 (lower is better)
Translates to: RGYRYLHSIKCGLKQHPLLETET*TWGRQS
Trigger: CGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAG...GAGCGGGTGCTGCTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTCAATCCTATCAGGTCTaGGTAGGGCAAGGCATTGTG +
Preference number: 2 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLQSYQV*VGQGIV
Trigger: CACAATGCCTTGCCCTACTCAGACCTGATAGGATTG...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTATAGCAACAGGCATCTaGATCAGCCTGGCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLIATGI*ISLASE
Trigger: TTCAGAGGCCAGGCTGATTCAGATGCCTGTTGCTAT...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGAGAAGCAGCACTACCTaGAAGATTATTTGGCATTTA +
Preference number: 2 (lower is better)
Translates to: RWPFQETLHTVTGSICGKRSSTT*KIIWHL
Trigger: TAAATGCCAAATAATCTTCCAGGTAGTGCTGCTTCT...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp TTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAATGGAGAGCAACAATACTGCTGTCTGTGTCTaGGGCCAGCGTCTGCTCAGT +
Preference number: 2 (lower is better)
Translates to: FPEHSCEKECLPTMESNNTAVCV*GQRLLS
Trigger: ACTGAGCAGACGCTGGCCTCAGACACAGACAGCAGT...ATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
3UTR-3UTR TCA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGCAATCCTATCAGGTCTaGGTAGGGCAAGGCATTGTG +
Preference number: 2 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMQSYQV*VGQGIV
Trigger: CACAATGCCTTGCCCTACTCAGACCTGATAGGATTG...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACACCCAGAACATTCTTGTaGAAAGGAATGCCTCCCAAC +
Preference number: 2 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTPRTFL*KGMPPN
Trigger: GTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGG...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTTTCCTTCACGTCCTCTaGAGAGTTTCCCAGAACATT +
Preference number: 2 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLFLHVL*RVSQNI
Trigger: AATGTTCTGGGAAACTCTTCAGAGGACGTGAAGGAA...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR GCA 90 bp CCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGTTCACCTACTCTAACTaGTCACCTGAAATGATCTTG +
Preference number: 2 (lower is better)
Translates to: PLKLRPGHGGDSRFLLGWFTYSN*SPEMIL
Trigger: CAAGATCATTTCAGGTGAGCAGTTAGAGTAGGTGAA...CCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp GACAGACTCGTACGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGCTACCTGGTGGAAGATaGCCTTTCCAGGAAACCCTC +
Preference number: 2 (lower is better)
Translates to: DRLVRGYRYLHSIKCGLKLPGGR*PFQETL
Trigger: GAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAG...CTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACGTACGAGTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp GACAGACTCGTACGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGGCTCCGTTCCTGCAGTaGCACTTAACATACTCAGCA +
Preference number: 2 (lower is better)
Translates to: DRLVRGYRYLHSIKCGLKAPFLQ*HLTYSA
Trigger: TGCTGAGTATGTTAAGTGTCACTGCAGGAACGGAGC...CTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACGTACGAGTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGCCAGCGTCTGCTCAGTaGACATGGATGAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMPASAQ*TWMKCH
Trigger: ATGACATTTCATCCATGTCCACTGAGCAGACGCTGG...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
3UTR-3UTR CCA 90 bp CCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGCCAATAAGATATAACTaGTGCAGAGAGAGCCATATA +
Preference number: 2 (lower is better)
Translates to: PLKLRPGHGGDSRFLLGWPIRYN*CRESHI
Trigger: TATATGGCTCTCTCTGCACCAGTTATATCTTATTGG...CCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp TCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACTTGATCGATGAAGACTaGGAAGGAGTGGCGTTGCTA +
Preference number: 2 (lower is better)
Translates to: SKQAILSGLSRARHCVSYLIDED*EGVALL
Trigger: TAGCAACGCCACTCCTTCTCAGTCTTCATCGATCAA...GTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
3UTR-3UTR CCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAGAAAATCAAGAACGTaGTATTGGCCGAGGGAAAGT +
Preference number: 2 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTRKSRT*YWPRES
Trigger: ACTTTCCCTCGGCCAATACCACGTTCTTGATTTTCT...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp GACAGACTCGTACGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGTTGAAACCATTTGCGTaGCACCAAGACCCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: DRLVRGYRYLHSIKCGLKLKPFA*HQDPGK
Trigger: TTTGCCAGGGTCTTGGTGCCACGCAAATGGTTTCAA...CTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACGTACGAGTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR CAA 90 bp GCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGTTTTTCTATTaGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGA +
Preference number: 2 (lower is better)
Translates to: ARHCVSYMQNMEFFY*VPSTPKHFRPTEVR
Trigger: TCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAACTCCATGTTCTGCATGTAAGAAACACAATGCCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp CGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAAATGTCATTGATCGATaGAGACTGAGAAGGAGTGGC +
Preference number: 2 (lower is better)
Translates to: RPLKSFPEHSCEKECLPTNVIDR*RLRRSG
Trigger: GCCACTCCTTCTCAGTCTTCATCGATCAATGACATT...TGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
3UTR-3UTR GCA 90 bp GACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTTCGAGGCATCAAGACTaGTGTCTGTGTCTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: DIFCLILSSKQAILSGLSSRHQD*CLCLRP
Trigger: TGGCCTCAGACACAGACAGCAGTCTTGATGCCTCGA...ACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
3UTR-3UTR CCA 90 bp ACTCTGAATTGGACCTGCATATTGGTGAAGTCAAAACTTACTGCCATTAGTTTTTCCTCCTCTCAGTACTaGGGCTCTGCGTCTCACCTG +
Preference number: 2 (lower is better)
Translates to: TLNWTCILVKSKLTAISFSSSQY*GSASHL
Trigger: CAGGTGAGACGCAGAGCCCCAGTACTGAGAGGAGGA...AAAACTAATGGCAGTAAGTTTTGACTTCACCAATATGCAGGTCCAATTCAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452135.7
3UTR-3UTR CCA 90 bp TCTCTTTCACTTAGGTCCTTTGTAATGTGCTTCAGTTCTTACTTTGGGGGAAAAGCTCGTGTAAGCAGGTaGTCATGCTGCCTGAGGCAT +
Preference number: 2 (lower is better)
Translates to: SLSLRSFVMCFSSYFGGKARVSR*SCCLRH
Trigger: ATGCCTCAGGCAGCATGACCACCTGCTTACACGAGC...TTTTCCCCCAAAGTAAGAACTGAAGCACATTACAAAGGACCTAAGTGAAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539014.5
3UTR-3UTR TCA 90 bp ATCTCTAGTGAGCATTTTGTAAAATTCCACTCCAACGTTAGGCCATGGATGCAGTTGATCGATGAAGACTaGGAAGGAGTGGCGTTGCTA +
Preference number: 2 (lower is better)
Translates to: ISSEHFVKFHSNVRPWMQLIDED*EGVALL
Trigger: TAGCAACGCCACTCCTTCTCAGTCTTCATCGATCAA...CTGCATCCATGGCCTAACGTTGGAGTGGAATTTTACAAAATGCTCACTAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
3UTR-3UTR TCA 90 bp ATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTAATGTCATTGATCGATaGAGACTGAGAAGGAGTGGC +
Preference number: 2 (lower is better)
Translates to: ILSSKQAILSGLSRARHCNVIDR*RLRRSG
Trigger: GCCACTCCTTCTCAGTCTTCATCGATCAATGACATT...ACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
3UTR-3UTR TCA 90 bp TTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTCTTCATGAACTCTGCTaGTGGTGTTCCCAGCTGCTC +
Preference number: 2 (lower is better)
Translates to: FILSRSDSDGNIQSGKSSLHELC*WCSQLL
Trigger: GAGCAGCTGGGAACACCATCAGCAGAGTTCATGAAG...AGAACTCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397072.7
3UTR-3UTR TCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTGACGGCTTAGTTTCTTaGCTGCAACATTTATCCCAA +
Preference number: 2 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSDGLVS*LQHLSQ
Trigger: TTGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTC...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
3UTR-3UTR TCA 90 bp ACAGAGATCCGCTTGTCAGGATCAATCACTAACATTTTTGATAACAGATCTCTGGTCTCGCTCAGATTCTaGTGGGAATATCCAATCTGG +
Preference number: 2 (lower is better)
Translates to: TEIRLSGSITNIFDNRSLVSLRF*WEYPIW
Trigger: CCAGATTGGATATTCCCATCAGAATCTGAGCGAGAC...CAGAGATCTGTTATCAAAAATGTTAGTGATTGATCCTGACAAGCGGATCTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397072.7
3UTR-3UTR CCA 90 bp CGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAAGAAGCAGCACTACCTaGAAGATTATTTGGCATTTA +
Preference number: 2 (lower is better)
Translates to: RPLKSFPEHSCEKECLPTRSSTT*KIIWHL
Trigger: TAAATGCCAAATAATCTTCCAGGTAGTGCTGCTTCT...TGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGACATGATGCAACCCACTaGCCAGATATCAACGTTCTC +
Preference number: 2 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGHDATH*PDINVL
Trigger: GAGAACGTTGATATCTGGTCAGTGGGTTGCATCATG...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
3UTR-3UTR TCA 90 bp TTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTCATGATGCAACCCACTaGCCAGATATCAACGTTCTC +
Preference number: 2 (lower is better)
Translates to: FILSRSDSDGNIQSGKSSHDATH*PDINVL
Trigger: GAGAACGTTGATATCTGGTCAGTGGGTTGCATCATG...AGAACTCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397072.7
3UTR-3UTR TCA 90 bp ACTCTGAATTGGACCTGCATATTGGTGAAGTCAAAACTTACTGCCATTAGTTTTTTCCTTCACGTCCTCTaGAGAGTTTCCCAGAACATT +
Preference number: 2 (lower is better)
Translates to: TLNWTCILVKSKLTAISFFLHVL*RVSQNI
Trigger: AATGTTCTGGGAAACTCTTCAGAGGACGTGAAGGAA...AAAACTAATGGCAGTAAGTTTTGACTTCACCAATATGCAGGTCCAATTCAGAGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452135.7
3UTR-3UTR TCA 90 bp TTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTCTTCAGGGTGCAGTCTaGTTTCACAACAATGTTGCT +
Preference number: 2 (lower is better)
Translates to: FILSRSDSDGNIQSGKSSLQGAV*FHNNVA
Trigger: AGCAACATTGTTGTGAAATCAGACTGCACCCTGAAG...AGAACTCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397072.7
3UTR-3UTR TCA 90 bp TTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTGCTGAAGTTTCTTCATaGACTCTGCTGATGGTGTTC +
Preference number: 2 (lower is better)
Translates to: FILSRSDSDGNIQSGKSSAEVSS*TLLMVF
Trigger: GAACACCATCAGCAGAGTTCATGAAGAAACTTCAGC...AGAACTCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397072.7
3UTR-3UTR CCA 90 bp CAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATAATTCTCAGCCCCAAAAGAAGCAGCACTACCTaGAAGATTATTTGGCATTTA +
Preference number: 2 (lower is better)
Translates to: QDVHISVLVLAVIILSPKRSSTT*KIIWHL
Trigger: TAAATGCCAAATAATCTTCCAGGTAGTGCTGCTTCT...TTTGGGGCTGAGAATTATCACGGCTAAAACCAAGACACTTATGTGGACATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp TTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTGACGGCTTAGTTTCTTaGCTGCAACATTTATCCCAA +
Preference number: 2 (lower is better)
Translates to: FILSRSDSDGNIQSGKSSDGLVS*LQHLSQ
Trigger: TTGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTC...AGAACTCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397072.7
3UTR-3UTR GCA 90 bp ACAGAGATCCGCTTGTCAGGATCAATCACTAACATTTTTGATAACAGATCTCTGGATCAATATGGTCAGTaGCTTGGAATATCACACAAC +
Preference number: 2 (lower is better)
Translates to: TEIRLSGSITNIFDNRSLDQYGQ*LGISHN
Trigger: GTTGTGTGATATTCCAAGGCACTGACCATATTGATC...CAGAGATCTGTTATCAAAAATGTTAGTGATTGATCCTGACAAGCGGATCTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397072.7
3UTR-3UTR CCA 90 bp AACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTACAATCATCCCAGACAAGATTCCAAAGTGCTAGATaGGCAAGTCCAAGCAAGCAT +
Preference number: 2 (lower is better)
Translates to: NLKLYRAVKLNVQSSQTRFQSAR*ASPSKH
Trigger: ATGCTTGCTTGGACTTGCCCATCTAGCACTTTGGAA...TCTTGTCTGGGATGATTGTACATTCAGCTTTACTGCACGATACAATTTTAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CCA 90 bp CTTTCACTTAGGTCCTTTGTAATGTGCTTCAGTTCTTACTTTGGGGGAAAATATATACGGTCAGTGCCTTaGAATATCACACAACCTTTC +
Preference number: 2 (lower is better)
Translates to: LSLRSFVMCFSSYFGGKYIRSVP*NITQPF
Trigger: GAAAGGTTGTGTGATATTCCAAGGCACTGACCGTAT...ATATTTTCCCCCAAAGTAAGAACTGAAGCACATTACAAAGGACCTAAGTGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539014.5
3UTR CAA 90 bp GATAAGGTAGCTAGGATTTCAAGCAGCACTAAGCAAAACTTAAAATaGTATCGTGCAGTAAAGCTGAATGTACAATCATCCCAGACAAGA +
Preference number: 2 (lower is better)
Translates to: DKVARISSSTKQNLK*YRAVKLNVQSSQTR
Trigger: TCTTGTCTGGGATGATTGTACATTCAGCTTTACTGCACGATACAATTTTAAGTTTTGCTTAGTGCTGCTTGAAATCCTAGCTACCTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR TCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAGGCTTCAAATCTCTATaGATTATACCAGCTGAATGC +
Preference number: 2 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGGFKSL*IIPAEC
Trigger: GCATTCAGCTGGTATAATTCATAGAGATTTGAAGCC...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
3UTR-3UTR GCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAGATCAATATGGTCAGTaGCTTGGAATATCACACAAC +
Preference number: 2 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGDQYGQ*LGISHN
Trigger: GTTGTGTGATATTCCAAGGCACTGACCATATTGATC...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
3UTR-3UTR CCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAATATGGTCAGTGCCTTaGAATATCACACAACCTTTC +
Preference number: 2 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGIWSVP*NITQPF
Trigger: GAAAGGTTGTGTGATATTCCAAGGCACTGACCATAT...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
3UTR-3UTR CCA 90 bp TTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTATATGGTCAGTGCCTTaGAATATCACACAACCTTTC +
Preference number: 2 (lower is better)
Translates to: FILSRSDSDGNIQSGKSSIWSVP*NITQPF
Trigger: GAAAGGTTGTGTGATATTCCAAGGCACTGACCATAT...AGAACTCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397072.7
3UTR-3UTR CCA 90 bp TTGTTTTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGATTCCAGGATACTTTaGTCTGTTTTCGACATAATT +
Preference number: 2 (lower is better)
Translates to: LFLFCLAQILMGISNLERDSRIL*SVFDII
Trigger: AATTATGTCGAAAACAGACCAAAGTATCCTGGAATC...TCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAAAACAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397072.7
3UTR GCA 72 bp CACAGAGGAGCGAGTGAGCAGAAGGGCGTCTGCGGGTaGCTCGTCCCCCGTCCACGTCTCCCGGGGAGGGAG +
Preference number: 3 (lower is better)
Translates to: HRGASEQKGVCG*LVPRPRLPGRE
Trigger: CTCCCTCCCCGGGAGACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCACTCGCTCCTCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR TCA 72 bp GTGGCAAGTGGCTCGCTGAATGCACAGAGGAGCGAGTaGGCAGAAGGGCGTCTGCGGGTGCCTCGTCCCCCG +
Preference number: 3 (lower is better)
Translates to: VASGSLNAQRSE*AEGRLRVPRPP
Trigger: CGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCACTCGCTCCTCTGTGCATTCAGCGAGCCACTTGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR TCA 72 bp CACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTaGATGCACAGAGGAGCGAGTGAGCAGAAGGGCGTC +
Preference number: 3 (lower is better)
Translates to: HRHGLHLWQVAR*MHRGASEQKGV
Trigger: GACGCCCTTCTGCTCACTCGCTCCTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR GCA 72 bp CCCGTCCACGTCTCCCGGGGAGGGAGCATCACACAGTaGAGGGCAGCTCGCGCATTTTCAACCTCTCCCTTT +
Preference number: 3 (lower is better)
Translates to: PVHVSRGGSITQ*RAARAFSTSPF
Trigger: AAAGGGAGAGGTTGAAAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAGACGTGGACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR GCA 72 bp GTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATaGACAGAGGAGCGAGTGAGCAGAAGGGCGTCTGCG +
Preference number: 3 (lower is better)
Translates to: VTGSICGKWLAE*TEERVSRRASA
Trigger: CGCAGACGCCCTTCTGCTCACTCGCTCCTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR GCA 72 bp GACAGCCTTCAAGGGGTCCCGTCGAGGCATCAAGACTaGTGTCTGTGTCTGAGGCCAGCGTCTGCTCAGTGG +
Preference number: 3 (lower is better)
Translates to: DSLQGVPSRHQD*CLCLRPASAQW
Trigger: CCACTGAGCAGACGCTGGCCTCAGACACAGACAGCAGTCTTGATGCCTCGACGGGACCCCTTGAAGGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
3UTR CCA 72 bp ACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTaGCTCGCTGAATGCACAGAGGAGCGAGTGAGCAGA +
Preference number: 3 (lower is better)
Translates to: TLHTVTGSICGK*LAECTEERVSR
Trigger: TCTGCTCACTCGCTCCTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR GCA 72 bp TGGCGGGGCCAAGGTCGCGGGGAAGGATACGGTCAGTaGCTTGGAATATCACACAACCTTTCACCAGCTCTC +
Preference number: 3 (lower is better)
Translates to: WRGQGRGEGYGQ*LGISHNLSPAL
Trigger: GAGAGCTGGTGAAAGGTTGTGTGATATTCCAAGGCACTGACCGTATCCTTCCCCGCGACCTTGGCCCCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539014.5
3UTR CCA 72 bp GGGCCAAGGTCGCGGGGAAGGATACGGTCAGTGCCTTaGAATATCACACAACCTTTCACCAGCTCTCCCATG +
Preference number: 3 (lower is better)
Translates to: GPRSRGRIRSVP*NITQPFTSSPM
Trigger: CATGGGAGAGCTGGTGAAAGGTTGTGTGATATTCCAAGGCACTGACCGTATCCTTCCCCGCGACCTTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539014.5
3UTR CCA 72 bp GTCTGCTCTCTGGACTCTGCCCTTGAAACTGAGACCTaGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: VCSLDSALETET*TWGRQSFPSWL
Trigger: CAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGTCCAGAGAGCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CAA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGAGTCCAAGCAAGCATTaGTGGTCACATGCACATACA +
Preference number: 3 (lower is better)
Translates to: LHTVTGSICGKWLAECTESPSKH*WSHAHT
Trigger: TGTATGTGCATGTGACCACAAATGCTTGCTTGGACT...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CAA 90 bp GGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTAGTCCAAGCAAGCATTaGTGGTCACATGCACATACA +
Preference number: 3 (lower is better)
Translates to: GGRWPFQETLHTVTGSICSPSKH*WSHAHT
Trigger: TGTATGTGCATGTGACCACAAATGCTTGCTTGGACT...ACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CAA 90 bp GAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCGTCCACATAAGTGTCTaGGTTTTAGCCGTGATAATT +
Preference number: 3 (lower is better)
Translates to: ETLHTVTGSICGKWLAECVHISV*VLAVII
Trigger: AATTATCACGGCTAAAACCAAGACACTTATGTGGAC...GCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CAA 90 bp GATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGTCCACATAAGTGTCTaGGTTTTAGCCGTGATAATT +
Preference number: 3 (lower is better)
Translates to: DGLSRKPSTPSRAPSVASVHISV*VLAVII
Trigger: AATTATCACGGCTAAAACCAAGACACTTATGTGGAC...ACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CAA 90 bp GACAGACTCGTACGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGCTCTGGACTCTGCCCTaGAAACTGAGACCTGGACAT +
Preference number: 3 (lower is better)
Translates to: DRLVRGYRYLHSIKCGLKLWTLP*KLRPGH
Trigger: ATGTCCAGGTCTCAGTTTCAAGGGCAGAGTCCAGAG...CTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACGTACGAGTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CAA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTATGGAGTTTTTCTATTaGGTTCCATCAACTCCCAAG +
Preference number: 3 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLMEFFY*VPSTPK
Trigger: CTTGGGAGTTGATGGAACCAAATAGAAAAACTCCAT...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CAA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGATGGAGTTTTTCTATTaGGTTCCATCAACTCCCAAG +
Preference number: 3 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMMEFFY*VPSTPK
Trigger: CTTGGGAGTTGATGGAACCAAATAGAAAAACTCCAT...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CAA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGGTCCACATAAGTGTCTaGGTTTTAGCCGTGATAATT +
Preference number: 3 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMVHISV*VLAVII
Trigger: AATTATCACGGCTAAAACCAAGACACTTATGTGGAC...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR GCA 72 bp CTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATaGCTCCCAACAATGGAGAGCAACAATAGCAACAGG +
Preference number: 3 (lower is better)
Translates to: LKSFPEHSCEKE*LPTMESNNSNR
Trigger: CCTGTTGCTATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CAA 90 bp ACTCTGAATTGGACCTGCATATTGGTGAAGTCAAAACTTACTGCCATTAGTTTTCTCTGGACTCTGCCCTaGAAACTGAGACCTGGACAT +
Preference number: 3 (lower is better)
Translates to: TLNWTCILVKSKLTAISFLWTLP*KLRPGH
Trigger: ATGTCCAGGTCTCAGTTTCAAGGGCAGAGTCCAGAG...AAAACTAATGGCAGTAAGTTTTGACTTCACCAATATGCAGGTCCAATTCAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452135.7
3UTR-3UTR CAA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTGGACGGCTTAGTTTCTaGACTGCAACATTTATCCCA +
Preference number: 3 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSGRLSF*TATFIP
Trigger: TGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTCC...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
3UTR-3UTR CAA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTTCTCTTTGCATGAGTTaGGTTCTGAAAAGGACGGCT +
Preference number: 3 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSSLCMS*VLKRTA
Trigger: AGCCGTCCTTTTCAGAACCAAACTCATGCAAAGAGA...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
3UTR TCA 72 bp AACAATAGCAACAGGCATCTGAATCAGCCTGGCCTCTaGAAACAGACCAAAGAGGAGTTTATCTGCTTTCTT +
Preference number: 3 (lower is better)
Translates to: NNSNRHLNQPGL*KQTKEEFICFL
Trigger: AAGAAAGCAGATAAACTCCTCTTTGGTCTGTTTTCAGAGGCCAGGCTGATTCAGATGCCTGTTGCTATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR TCA 72 bp TCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTaGGTAGGGCAAGGCATTGTGTTTCTTACATGCAGA +
Preference number: 3 (lower is better)
Translates to: SFYHLSRQSYQV*VGQGIVFLTCR
Trigger: TCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR-3UTR CAA 90 bp ACAGAGATCCGCTTGTCAGGATCAATCACTAACATTTTTGATAACAGATCTCTGTCTCTTTGCATGAGTTaGGTTCTGAAAAGGACGGCT +
Preference number: 3 (lower is better)
Translates to: TEIRLSGSITNIFDNRSLSLCMS*VLKRTA
Trigger: AGCCGTCCTTTTCAGAACCAAACTCATGCAAAGAGA...CAGAGATCTGTTATCAAAAATGTTAGTGATTGATCCTGACAAGCGGATCTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397072.7
3UTR-3UTR CAA 90 bp CAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATAATTCTCAGCCCCAAATCAATGCTGACAGGTTaGCTATTTCTAACCTATCAT +
Preference number: 3 (lower is better)
Translates to: QDVHISVLVLAVIILSPKSMLTG*LFLTYH
Trigger: ATGATAGGTTAGAAATAGCAAACCTGTCAGCATTGA...TTTGGGGCTGAGAATTATCACGGCTAAAACCAAGACACTTATGTGGACATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
3UTR-3UTR CAA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAGGACGGCTTAGTTTCTaGACTGCAACATTTATCCCA +
Preference number: 3 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGGRLSF*TATFIP
Trigger: TGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTCC...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
3UTR CCA 72 bp TGGAAAGAGTTCTTCAAATTTGATTCCAGGATACTTTaGTCTGTTTTCGACATAATTCCTCACAGTTGGCTG +
Preference number: 3 (lower is better)
Translates to: WKEFFKFDSRIL*SVFDIIPHSWL
Trigger: CAGCCAACTGTGAGGAATTATGTCGAAAACAGACCAAAGTATCCTGGAATCAAATTTGAAGAACTCTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
3UTR-3UTR CAA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAAATATGGTCAGTGCCTaGGAATATCACACAACCTTT +
Preference number: 3 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGNMVSA*EYHTTF
Trigger: AAAGGTTGTGTGATATTCCAAGGCACTGACCATATT...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
3UTR TCA 72 bp GTTGCTAGGCTTCAAATCTCTATGAATTATACCAGCTaGATGCAGATGTTTAATACCACAAAGCATCTGGTA +
Preference number: 3 (lower is better)
Translates to: VARLQISMNYTS*MQMFNTTKHLV
Trigger: TACCAGATGCTTTGTGGTATTAAACATCTGCATTCAGCTGGTATAATTCATAGAGATTTGAAGCCTAGCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp GTGAGCAGAAGGGCGTCTGCGGGTGCCTCGTCCCCCGTCCACGTCTCCCGGGGAGCACAGAGGAGCGAGTaGGCAGAAGGGCGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: VSRRASAGASSPVHVSRGAQRSE*AEGRLR
Trigger: CCGCAGACGCCCTTCTGCTCACTCGCTCCTCTGTGC...TCCCCGGGAGACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp CTCGTCCCCCGTCCACGTCTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCTCAGTACTGGGGCTCTaGGTCTCACCTGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: LVPRPRLPGREHHTVQGSSVLGL*VSPAPI
Trigger: GATGGGAGCAGGTGAGACGCAGAGCCCCAGTACTGA...GCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAGACGTGGACGGGGGACGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GTGAGCAGAAGGGCGTCTGCGGGTGCCTCGTCCCCCGTCCACGTCTCCCGGGGACTTCATGAACTCTGCTaGTGGTGTTCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VSRRASAGASSPVHVSRGLHELC*WCSQLL
Trigger: GAGCAGCTGGGAACACCATCAGCAGAGTTCATGAAG...TCCCCGGGAGACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp GAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCGAGCAGAAGGGCGTCTaGGGGTGCCTCGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: ETLHTVTGSICGKWLAECEQKGV*GCLVPR
Trigger: ACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTC...GCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GTGAGCAGAAGGGCGTCTGCGGGTGCCTCGTCCCCCGTCCACGTCTCCCGGGGAGGTCATACCAAACAGTaGTGTATGGGTGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: VSRRASAGASSPVHVSRGGHTKQ*CMGDAE
Trigger: CTCTGCGTCACCCATACATCACTGTTTGGTATGACC...TCCCCGGGAGACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp GTGAGCAGAAGGGCGTCTGCGGGTGCCTCGTCCCCCGTCCACGTCTCCCGGGGAATGGAGGACCATTTCTaGCATGATGCACCCGACAGA +
Preference number: 4 (lower is better)
Translates to: VSRRASAGASSPVHVSRGMEDHF*HDAPDR
Trigger: TCTGTCGGGTGCATCATGGCAGAAATGGTCCTCCAT...TCCCCGGGAGACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000455781.5
CDS-3UTR CCA 90 bp CTCGTCCCCCGTCCACGTCTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCACTGAGACCTGGACATaGGGGAGACAGTCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LVPRPRLPGREHHTVQGSTETWT*GRQSFP
Trigger: AGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGT...GCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAGACGTGGACGGGGGACGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GCATTAAGAAAGCATGGCGGGGCCAAGGTCGCGGGGAAGGATACGGTCAGTGCCAGCCCATACCCAGGATaGCTTCGGGCGCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: ALRKHGGAKVAGKDTVSASPYPG*LRAPGS
Trigger: ACTACCGGGCGCCCGAAGTCATCCTGGGTATGGGCT...GGCACTGACCGTATCCTTCCCCGCGACCTTGGCCCCGCCATGCTTTCTTAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539014.5
CDS-3UTR TCA 90 bp GTGAGCAGAAGGGCGTCTGCGGGTGCCTCGTCCCCCGTCCACGTCTCCCGGGGACTGCTGCATCTGTGCTaGAGGCTGATCTTTTACAAC +
Preference number: 4 (lower is better)
Translates to: VSRRASAGASSPVHVSRGLLHLC*RLIFYN
Trigger: GTTGTAAAAGATCAGCCTTCAGCACAGATGCAGCAG...TCCCCGGGAGACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
CDS-3UTR TCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGGCACAGAGGAGCGAGTaGGCAGAAGGGCGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: RWPFQETLHTVTGSICGKAQRSE*AEGRLR
Trigger: CCGCAGACGCCCTTCTGCTCACTCGCTCCTCTGTGC...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GTGAGCAGAAGGGCGTCTGCGGGTGCCTCGTCCCCCGTCCACGTCTCCCGGGGAGCATCTGAATCAGCCTaGCCTCTGAAAACAGACCAA +
Preference number: 4 (lower is better)
Translates to: VSRRASAGASSPVHVSRGASESA*PLKTDQ
Trigger: TTGGTCTGTTTTCAGAGGCCAGGCTGATTCAGATGC...TCCCCGGGAGACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCTCGCGCATTTTCAACCTCCAGGCAGGCAAAACGTaGTCACCACAGCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: LPGREHHTVQGSSRIFNLQAGKT*SPQLRS
Trigger: GGAACGGAGCTGTGGTGATCACGTTTTGCCTGCCTG...GAGGTTGAAAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTTGCGTGCTAGTCACTCCTaGCTCCGCGGCCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PKHFRPTEVRVPSMLTGLRASHS*LRGPGS
Trigger: GGAGCCGGGGCCGCGGAGCCAGGAGTGACTAGCACG...CAAACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GCACGCTCGCCTCTACCTGGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCGACACGGACTTGGGGTaGGCAAGGGGCCCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: ARSPLPGGRWPFQETLHTDTDLG*ARGPVR
Trigger: TCTTACAGGGCCCCTTGCCCACCCCAAGTCCGTGTC...GGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CCTGAGGCATTAAGAAAGCATGGCGGGGCCAAGGTCGCGGGGAAGGATACGGTCGGCATTAAGAAAGCATaGCGGGGCCAAGGTCGCGGG +
Preference number: 4 (lower is better)
Translates to: PEALRKHGGAKVAGKDTVGIKKA*RGQGRG
Trigger: CCCGCGACCTTGGCCCCGCCATGCTTTCTTAATGCC...GACCGTATCCTTCCCCGCGACCTTGGCCCCGCCATGCTTTCTTAATGCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539014.5
CDS-3UTR TCA 90 bp GTGAGCAGAAGGGCGTCTGCGGGTGCCTCGTCCCCCGTCCACGTCTCCCGGGGAGACGGCTTAGTTTCTTaGCTGCAACATTTATCCCAA +
Preference number: 4 (lower is better)
Translates to: VSRRASAGASSPVHVSRGDGLVS*LQHLSQ
Trigger: TTGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTC...TCCCCGGGAGACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGTGGCAAGTGGCTCGCTaGATGCACAGAGGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: LHTVTGSICGKWLAECTEWQVAR*MHRGAS
Trigger: ACTCGCTCCTCTGTGCATTCAGCGAGCCACTTGCCA...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGACCCTGAAGCTGGGGTaGGGTATTTCTGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LHTVTGSICGKWLAECTETLKLG*GISVEP
Trigger: GGGCTCCACAGAAATACCTCACCCCAGCTTCAGGGT...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGGCATTAAATGCGGGTTaGAGCAGCACCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LHTVTGSICGKWLAECTEALNAG*SSTRSV
Trigger: CACGGAGCGGGTGCTGCTTCAACCCGCATTTAATGC...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp CCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTTGAAGGGCGTCTGCGGGTaGCTCGTCCCCCGTCCACGT +
Preference number: 4 (lower is better)
Translates to: PKHFRPTEVRVPSMLTGLKGVCG*LVPRPR
Trigger: ACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTT...CAAACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGCAGCACCCGCTCCGTGCTAGTCACTCCTaGCTCCGCGGCCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: RGYRYLHSIKCGLKQHPLRASHS*LRGPGS
Trigger: GGAGCCGGGGCCGCGGAGCCAGGAGTGACTAGCACG...GAGCGGGTGCTGCTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ACAGTCTGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGCGTGCTAGTCACTCCTaGCTCCGCGGCCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: TVWSGFYDFVLVSARVSRRASHS*LRGPGS
Trigger: GGAGCCGGGGCCGCGGAGCCAGGAGTGACTAGCACG...CCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCAGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425491.6
CDS-3UTR CCA 90 bp CTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCTCGCGCATTTTCAACCTCCTCGCCTCTACCTGGTaGAAGATGGCCTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LPGREHHTVQGSSRIFNLLASTW*KMAFPG
Trigger: TCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAG...GAGGTTGAAAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GCACGCTCGCCTCTACCTGGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCTCCTCCTCTCAGTACTaGGGCTCTGCGTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: ARSPLPGGRWPFQETLHTSSSQY*GSASHL
Trigger: CAGGTGAGACGCAGAGCCCCAGTACTGAGAGGAGGA...GGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCTCCTCCTCTCAGTACTaGGGCTCTGCGTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: ETLHTVTGSICGKWLAECSSSQY*GSASHL
Trigger: CAGGTGAGACGCAGAGCCCCAGTACTGAGAGGAGGA...GCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTTTTCAGACACGGACTTaGGGTGGGCAAGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: DGLSRKPSTPSRAPSVASFQTRT*GGQGAL
Trigger: CAGGGCCCCTTGCCCACCCCAAGTCCGTGTCTGAAA...ACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAGCCCATACCCAGGATaGCTTCGGGCGCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: PLKLRPGHGGDSRFLLGWSPYPG*LRAPGS
Trigger: ACTACCGGGCGCCCGAAGTCATCCTGGGTATGGGCT...CCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGACTGCTGTCTGTGTCTaGGGCCAGCGTCTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: RWPFQETLHTVTGSICGKTAVCV*GQRLLS
Trigger: ACTGAGCAGACGCTGGCCTCAGACACAGACAGCAGT...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGGCATTAAATGCGGGTTaGAGCAGCACCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RWPFQETLHTVTGSICGKALNAG*SSTRSV
Trigger: CACGGAGCGGGTGCTGCTTCAACCCGCATTTAATGC...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGGGGAGCATCACACAGTaGAGGGCAGCTCGCGCATTT +
Preference number: 4 (lower is better)
Translates to: RWPFQETLHTVTGSICGKGSITQ*RAARAF
Trigger: AAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCC...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTAAGGGCGTCTGCGGGTaGCTCGTCCCCCGTCCACGT +
Preference number: 4 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLKGVCG*LVPRPR
Trigger: ACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTT...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp GAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCAAGTGGCTCGCTGAATaGACAGAGGAGCGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: ETLHTVTGSICGKWLAECKWLAE*TEERVS
Trigger: GCTCACTCGCTCCTCTGTGCATTCAGCGAGCCACTT...GCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp GCACGCTCGCCTCTACCTGGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCAAGTGGCTCGCTGAATaGACAGAGGAGCGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: ARSPLPGGRWPFQETLHTKWLAE*TEERVS
Trigger: GCTCACTCGCTCCTCTGTGCATTCAGCGAGCCACTT...GGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CTCGTCCCCCGTCCACGTCTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCAGAAAATCAAGAACGTaGTATTGGCCGAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: LVPRPRLPGREHHTVQGSRKSRT*YWPRES
Trigger: ACTTTCCCTCGGCCAATACCACGTTCTTGATTTTCT...GCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAGACGTGGACGGGGGACGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGCTCGCCTCTACCTGGTaGAAGATGGCCTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LHTVTGSICGKWLAECTELASTW*KMAFPG
Trigger: TCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAG...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCGGTGAGGTATTTCTGTaGAGCCCTGTGGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ETLHTVTGSICGKWLAECGEVFL*SPVACP
Trigger: AGGACAGGCCACAGGGCTCCACAGAAATACCTCACC...GCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTCCTCCTCTCAGTACTaGGGCTCTGCGTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: RWPFQETLHTVTGSICGKSSSQY*GSASHL
Trigger: CAGGTGAGACGCAGAGCCCCAGTACTGAGAGGAGGA...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCTCGCGCATTTTCAACCTCACAGTGATGTATGGGTaGCGCAGAGCTTCGTCTACA +
Preference number: 4 (lower is better)
Translates to: LPGREHHTVQGSSRIFNLTVMYG*RRASST
Trigger: TGTAGACGAAGCTCTGCGTCACCCATACATCACTGT...GAGGTTGAAAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CTCGTCCCCCGTCCACGTCTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCATTACACCAATACTCTaGATTGGACCTGCATATTGG +
Preference number: 4 (lower is better)
Translates to: LVPRPRLPGREHHTVQGSITPIL*IGPAYW
Trigger: CCAATATGCAGGTCCAATTCAGAGTATTGGTGTAAT...GCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAGACGTGGACGGGGGACGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452135.7
CDS-3UTR GCA 90 bp CTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCTCGCGCATTTTCAACCTCATGGAGGACCATTTCTaGCATGATGCACCCGACAGA +
Preference number: 4 (lower is better)
Translates to: LPGREHHTVQGSSRIFNLMEDHF*HDAPDR
Trigger: TCTGTCGGGTGCATCATGGCAGAAATGGTCCTCCAT...GAGGTTGAAAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000455781.5
CDS-3UTR GCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGCCAGGGTTTCCAGACTaGTCTCCTGCTCTCACAGAA +
Preference number: 4 (lower is better)
Translates to: LHTVTGSICGKWLAECTEPGFPD*SPALTE
Trigger: TTCTGTGAGAGCAGGAGAGCAGTCTGGAAACCCTGG...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGGCACAAACAATCCCTTaGGCCCCAGAGCCAATTGGT +
Preference number: 4 (lower is better)
Translates to: LHTVTGSICGKWLAECTEAQTIP*APEPIG
Trigger: ACCAATTGGCTCTGGGGCCCAAGGGATTGTTTGTGC...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGTCCATCTGTGGCAAGTaGCTCGCTGAATGCACAGAG +
Preference number: 4 (lower is better)
Translates to: LHTVTGSICGKWLAECTESICGK*LAECTE
Trigger: CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGA...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCCTACCTGGTGGAAGATaGCCTTTCCAGGAAACCCTC +
Preference number: 4 (lower is better)
Translates to: ETLHTVTGSICGKWLAECLPGGR*PFQETL
Trigger: GAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAG...GCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGCTCGCCTCTACCTGGTaGAAGATGGCCTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RWPFQETLHTVTGSICGKLASTW*KMAFPG
Trigger: TCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAG...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GCACGCTCGCCTCTACCTGGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCACTGAGACCTGGACATaGGGGAGACAGTCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ARSPLPGGRWPFQETLHTTETWT*GRQSFP
Trigger: AGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGT...GGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGGACACGGACTTGGGGTaGGCAAGGGGCCCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: PLKLRPGHGGDSRFLLGWDTDLG*ARGPVR
Trigger: TCTTACAGGGCCCCTTGCCCACCCCAAGTCCGTGTC...CCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAAGCCCATACCCAGGATaGCTTCGGGCGCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: STPKHFRPTEVRVPSMLTSPYPG*LRAPGS
Trigger: ACTACCGGGCGCCCGAAGTCATCCTGGGTATGGGCT...TGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGTGATGTATGGGTaGCGCAGAGCTTCGTCTACA +
Preference number: 4 (lower is better)
Translates to: ETLHTVTGSICGKWLAECTVMYG*RRASST
Trigger: TGTAGACGAAGCTCTGCGTCACCCATACATCACTGT...GCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGACAGTGATGTATGGGTaGCGCAGAGCTTCGTCTACA +
Preference number: 4 (lower is better)
Translates to: LHTVTGSICGKWLAECTETVMYG*RRASST
Trigger: TGTAGACGAAGCTCTGCGTCACCCATACATCACTGT...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGCAATCCTATCAGGTCTaGGTAGGGCAAGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: LHTVTGSICGKWLAECTEQSYQV*VGQGIV
Trigger: CACAATGCCTTGCCCTACTCAGACCTGATAGGATTG...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCCAATCCTATCAGGTCTaGGTAGGGCAAGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: ETLHTVTGSICGKWLAECQSYQV*VGQGIV
Trigger: CACAATGCCTTGCCCTACTCAGACCTGATAGGATTG...GCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp CGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGCAGCACCCGCTCGCTCTGCGTCTCACCTaGTCCCATCTCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RGYRYLHSIKCGLKQHPLALRLT*SHLQAH
Trigger: GTGGGCCTGGAGATGGGAGCAGGTGAGACGCAGAGC...GAGCGGGTGCTGCTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTCTACCTGGTGGAAGATaGCCTTTCCAGGAAACCCTC +
Preference number: 4 (lower is better)
Translates to: GGRWPFQETLHTVTGSICLPGGR*PFQETL
Trigger: GAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAG...ACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTTTCAGACACGGACTTaGGGTGGGCAAGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TPKHFRPTEVRVPSMLTGFQTRT*GGQGAL
Trigger: CAGGGCCCCTTGCCCACCCCAAGTCCGTGTCTGAAA...ACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
3UTR CAA 72 bp GGGGCCAAGGTCGCGGGGAAGGATACGGTCAGTGCCTaGGAATATCACACAACCTTTCACCAGCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: GAKVAGKDTVSA*EYHTTFHQLSH
Trigger: ATGGGAGAGCTGGTGAAAGGTTGTGTGATATTCCAAGGCACTGACCGTATCCTTCCCCGCGACCTTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539014.5
CDS-3UTR TCA 90 bp CTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCTCGCGCATTTTCAACCTCAACGTTTTAGGACAGTaGAGGTTGAGTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: LPGREHHTVQGSSRIFNLNVLGQ*RLSLPL
Trigger: AAGTGGCAGACTCAACCTTCACTGTCCTAAAACGTT...GAGGTTGAAAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GCACGCTCGCCTCTACCTGGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCTTGATCGATGAAGACTaGGAAGGAGTGGCGTTGCTA +
Preference number: 4 (lower is better)
Translates to: ARSPLPGGRWPFQETLHTLIDED*EGVALL
Trigger: TAGCAACGCCACTCCTTCTCAGTCTTCATCGATCAA...GGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCTCGCGCATTTTCAACCTCAATGTCATTGATCGATaGAGACTGAGAAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LPGREHHTVQGSSRIFNLNVIDR*RLRRSG
Trigger: GCCACTCCTTCTCAGTCTTCATCGATCAATGACATT...GAGGTTGAAAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTACTGCTGTCTGTGTCTaGGGCCAGCGTCTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: TPKHFRPTEVRVPSMLTGTAVCV*GQRLLS
Trigger: ACTGAGCAGACGCTGGCCTCAGACACAGACAGCAGT...ACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTATAGCAACAGGCATCTaGATCAGCCTGGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GGRWPFQETLHTVTGSICIATGI*ISLASE
Trigger: TTCAGAGGCCAGGCTGATTCAGATGCCTGTTGCTAT...ACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCCCCAGAACATTCTTGTaGAAAGGAATGCCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: ETLHTVTGSICGKWLAECPRTFL*KGMPPN
Trigger: GTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGG...GCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGGCTCCGTTCCTGCAGTaGCACTTAACATACTCAGCA +
Preference number: 4 (lower is better)
Translates to: RWPFQETLHTVTGSICGKAPFLQ*HLTYSA
Trigger: TGCTGAGTATGTTAAGTGTCACTGCAGGAACGGAGC...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTCAGGCAGGCAAAACGTaGTCACCACAGCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: TPKHFRPTEVRVPSMLTGQAGKT*SPQLRS
Trigger: GGAACGGAGCTGTGGTGATCACGTTTTGCCTGCCTG...ACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTTGCAGGCAGGCAAAACGTaGTCACCACAGCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: PKHFRPTEVRVPSMLTGLQAGKT*SPQLRS
Trigger: GGAACGGAGCTGTGGTGATCACGTTTTGCCTGCCTG...CAAACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGGCACAGAGGAGCGAGTaGGCAGAAGGGCGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMAQRSE*AEGRLR
Trigger: CCGCAGACGCCCTTCTGCTCACTCGCTCCTCTGTGC...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGCATGATGCAACCCACTaGCCAGATATCAACGTTCTC +
Preference number: 4 (lower is better)
Translates to: LHTVTGSICGKWLAECTEHDATH*PDINVL
Trigger: GAGAACGTTGATATCTGGTCAGTGGGTTGCATCATG...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393360.7
ENST00000452135.7
CDS-3UTR GCA 90 bp TCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACAAGGGCGTCTGCGGGTaGCTCGTCCCCCGTCCACGT +
Preference number: 4 (lower is better)
Translates to: SKQAILSGLSRARHCVSYKGVCG*LVPRPR
Trigger: ACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTT...GTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTCAATATCCCGAAGGGTaGGCAAGTTTCAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: DGLSRKPSTPSRAPSVASQYPEG*ASFRSL
Trigger: GAGGGATCTGAAACTTGCCCACCCTTCGGGATATTG...ACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTCCAAACAGTGATGTATaGGTGACGCAGAGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: GGRWPFQETLHTVTGSICPNSDV*VTQSFV
Trigger: GACGAAGCTCTGCGTCACCCATACATCACTGTTTGG...ACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACGACACGGACTTGGGGTaGGCAAGGGGCCCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: INSQAFQAHGGESSFNADDTDLG*ARGPVR
Trigger: TCTTACAGGGCCCCTTGCCCACCCCAAGTCCGTGTC...GTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp TGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGTGGTCAGGCATTAAGAAAGCATaGCGGGGCCAAGGTCGCGGG +
Preference number: 4 (lower is better)
Translates to: WSGFYDFVLVSARVSRWSGIKKA*RGQGRG
Trigger: CCCGCGACCTTGGCCCCGCCATGCTTTCTTAATGCC...TGACCACCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR TCA 90 bp GCACGCTCGCCTCTACCTGGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCAACGTTTTAGGACAGTaGAGGTTGAGTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: ARSPLPGGRWPFQETLHTNVLGQ*RLSLPL
Trigger: AAGTGGCAGACTCAACCTTCACTGTCCTAAAACGTT...GGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CATGGCGGGGCCAAGGTCGCGGGGAAGGATACGGTCAGTGCCTTGGAATATCACAACGTTTTAGGACAGTaGAGGTTGAGTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: HGGAKVAGKDTVSALEYHNVLGQ*RLSLPL
Trigger: AAGTGGCAGACTCAACCTTCACTGTCCTAAAACGTT...GTGATATTCCAAGGCACTGACCGTATCCTTCCCCGCGACCTTGGCCCCGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539014.5
CDS-3UTR TCA 90 bp GCACGCTCGCCTCTACCTGGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCCTTCAGGGTGCAGTCTaGTTTCACAACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: ARSPLPGGRWPFQETLHTLQGAV*FHNNVA
Trigger: AGCAACATTGTTGTGAAATCAGACTGCACCCTGAAG...GGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GCACGCTCGCCTCTACCTGGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCTTCCTTCACGTCCTCTaGAGAGTTTCCCAGAACATT +
Preference number: 4 (lower is better)
Translates to: ARSPLPGGRWPFQETLHTFLHVL*RVSQNI
Trigger: AATGTTCTGGGAAACTCTTCAGAGGACGTGAAGGAA...GGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp CCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGTCGAGGCATCAAGACTaGTGTCTGTGTCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PLKLRPGHGGDSRFLLGWSRHQD*CLCLRP
Trigger: TGGCCTCAGACACAGACAGCAGTCTTGATGCCTCGA...CCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp CATTTTGTAAAATTCCACTCCAACGTTAGGCCATGGATGCAGGAACCTATCTGCAAGGGCGTCTGCGGGTaGCTCGTCCCCCGTCCACGT +
Preference number: 4 (lower is better)
Translates to: HFVKFHSNVRPWMQEPICKGVCG*LVPRPR
Trigger: ACGTGGACGGGGGACGAGGCACCCGCAGACGCCCTT...GCAGATAGGTTCCTGCATCCATGGCCTAACGTTGGAGTGGAATTTTACAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACATCAGTACTGGGGCTCTaGGTCTCACCTGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: STPKHFRPTEVRVPSMLTSVLGL*VSPAPI
Trigger: GATGGGAGCAGGTGAGACGCAGAGCCCCAGTACTGA...TGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTCGTGCTAGTCACTCCTaGCTCCGCGGCCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSRASHS*LRGPGS
Trigger: GGAGCCGGGGCCGCGGAGCCAGGAGTGACTAGCACG...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393362.8
CDS-3UTR CCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGCCAGCGTCTGCTCAGTaGACATGGATGAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: RWPFQETLHTVTGSICGKPASAQ*TWMKCH
Trigger: ATGACATTTCATCCATGTCCACTGAGCAGACGCTGG...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGTTCCAAAGTGCTAGATaGGCAAGTCCAAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: LHTVTGSICGKWLAECTEFQSAR*ASPSKH
Trigger: ATGCTTGCTTGGACTTGCCCATCTAGCACTTTGGAA...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTACGCTCGCCTCTACCTaGTGGAAGATGGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TPKHFRPTEVRVPSMLTGTLAST*WKMAFP
Trigger: TGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGT...ACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTTGAAACCATTTGCGTaGCACCAAGACCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: RWPFQETLHTVTGSICGKLKPFA*HQDPGK
Trigger: TTTGCCAGGGTCTTGGTGCCACGCAAATGGTTTCAA...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGCTTGAAACTGAGACCTaGACATGGGGGAGACAGTCG +
Preference number: 4 (lower is better)
Translates to: PLKLRPGHGGDSRFLLGWLETET*TWGRQS
Trigger: CGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAG...CCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp TCGCGGGGAAGGATACGGTCAGTGCCTTGGAATATCACACAACCTTTCACCAGCGCTCGTGTAAGCAGGTaGTCATGCTGCCTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SRGRIRSVPWNITQPFTSARVSR*SCCLRH
Trigger: ATGCCTCAGGCAGCATGACCACCTGCTTACACGAGC...GCTGGTGAAAGGTTGTGTGATATTCCAAGGCACTGACCGTATCCTTCCCCGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539014.5
CDS-3UTR TCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGATTTACTGTCGCTCATaGTGCAGCGTCCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: RWPFQETLHTVTGSICGKIYCRS*CSVLQY
Trigger: ATATTGCAGGACGCTGCATCATGAGCGACAGTAAAT...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGAACGTTTTAGGACAGTaGAGGTTGAGTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: RWPFQETLHTVTGSICGKNVLGQ*RLSLPL
Trigger: AAGTGGCAGACTCAACCTTCACTGTCCTAAAACGTT...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGGACGGCTTAGTTTCTTaGCTGCAACATTTATCCCAA +
Preference number: 4 (lower is better)
Translates to: LHTVTGSICGKWLAECTEDGLVS*LQHLSQ
Trigger: TTGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTC...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GAGGCATTAAGAAAGCATGGCGGGGCCAAGGTCGCGGGGAAGGATACGGTCAGTCTTCAGGGTGCAGTCTaGTTTCACAACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: EALRKHGGAKVAGKDTVSLQGAV*FHNNVA
Trigger: AGCAACATTGTTGTGAAATCAGACTGCACCCTGAAG...ACTGACCGTATCCTTCCCCGCGACCTTGGCCCCGCCATGCTTTCTTAATGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539014.5
CDS-3UTR TCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACATGGCAAGTGGCTCGCTaGATGCACAGAGGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTWQVAR*MHRGAS
Trigger: ACTCGCTCCTCTGTGCATTCAGCGAGCCACTTGCCA...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAGCATTAAATGCGGGTTaGAGCAGCACCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTALNAG*SSTRSV
Trigger: CACGGAGCGGGTGCTGCTTCAACCCGCATTTAATGC...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAACTAAGGCTGACTGGTaGATTCTCCTGGCCACGCCT +
Preference number: 4 (lower is better)
Translates to: STPKHFRPTEVRVPSMLTTKADW*ILLATP
Trigger: AGGCGTGGCCAGGAGAATTCACCAGTCAGCCTTAGT...TGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452135.7
CDS-3UTR GCA 90 bp CACAGTCTGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGCATGATGCAGCGTCCTaGAATATCCCGAAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: HSLEWILRLCPRERSCKQHDAAS*NIPKGG
Trigger: CCCACCCTTCGGGATATTGCAGGACGCTGCATCATG...CTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCAGACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425491.6
CDS-3UTR GCA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGAGGTGGTGGGGCTTCTaGTTCGGCGGGGTCATACCA +
Preference number: 4 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMRWWGF*FGGVIP
Trigger: TGGTATGACCCCGCCGAAGCAGAAGCCCCACCACCT...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp GTTTTTCTATTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGGTGGTGGGGCTTCTaGTTCGGCGGGGTCATACCA +
Preference number: 4 (lower is better)
Translates to: VFLFGSINSQAFQAHGGERWWGF*FGGVIP
Trigger: TGGTATGACCCCGCCGAAGCAGAAGCCCCACCACCT...CTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp CCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGGAGAAGGAGTGGCGTTaGTACTTACTGCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: PLKLRPGHGGDSRFLLGWEKEWR*YLLLHL
Trigger: CAGATGCAGCAGTAAGTAGCAACGCCACTCCTTCTC...CCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp ACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTCGAGGCATCAAGACTaGTGTCTGTGTCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TPKHFRPTEVRVPSMLTGSRHQD*CLCLRP
Trigger: TGGCCTCAGACACAGACAGCAGTCTTGATGCCTCGA...ACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAATGGAGAGCAACAATGAGCAGAAGGGCGTCTaGGGGTGCCTCGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: FPEHSCEKECLPTMESNNEQKGV*GCLVPR
Trigger: ACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTC...ATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp CCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGTCACAGAACTCTGTCTaGTCTCTGGACTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PLKLRPGHGGDSRFLLGWSQNSV*SLDSAL
Trigger: AAGGGCAGAGTCCAGAGAGCAGACAGAGTTCTGTGA...CCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp GACAGACTCGTACGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGGCTCTGCGTCTCACCTaGTCCCATCTCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: DRLVRGYRYLHSIKCGLKALRLT*SHLQAH
Trigger: GTGGGCCTGGAGATGGGAGCAGGTGAGACGCAGAGC...CTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACGTACGAGTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGGCTCTGCGTCTCACCTaGTCCCATCTCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: LSGLSRARHCVSYMQNMEALRLT*SHLQAH
Trigger: GTGGGCCTGGAGATGGGAGCAGGTGAGACGCAGAGC...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp AAAGCATGGCGGGGCCAAGGTCGCGGGGAAGGATACGGTCAGTGCCTTGGAATAGAAGGATACGGTCAGTaGCTTGGAATATCACACAAC +
Preference number: 4 (lower is better)
Translates to: KAWRGQGRGEGYGQCLGIEGYGQ*LGISHN
Trigger: GTTGTGTGATATTCCAAGGCACTGACCGTATCCTTC...TATTCCAAGGCACTGACCGTATCCTTCCCCGCGACCTTGGCCCCGCCATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539014.5
CDS-3UTR GCA 90 bp GGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTCTAAACAGCCTGAAGTaGTTCAAACACAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: GGRWPFQETLHTVTGSICLNSLK*FKHRRQ
Trigger: CTGACGTCTGTGTTTGAAGCACTTCAGGCTGTTTAG...ACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452135.7
CDS-3UTR CCA 90 bp CCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTTGGCACAAACAATCCCTTaGGCCCCAGAGCCAATTGGT +
Preference number: 4 (lower is better)
Translates to: PKHFRPTEVRVPSMLTGLAQTIP*APEPIG
Trigger: ACCAATTGGCTCTGGGGCCCAAGGGATTGTTTGTGC...CAAACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTCTCGCCTCTACCTGGTaGAAGATGGCCTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLLASTW*KMAFPG
Trigger: TCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAG...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACACGCTCGCCTCTACCTaGTGGAAGATGGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: INSQAFQAHGGESSFNADTLAST*WKMAFP
Trigger: TGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGT...GTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGTGAGGTATTTCTGTaGAGCCCTGTGGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLGEVFL*SPVACP
Trigger: AGGACAGGCCACAGGGCTCCACAGAAATACCTCACC...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGAGACAGACTCGTACGTaGTTATCGCTACTTACACAG +
Preference number: 4 (lower is better)
Translates to: RWPFQETLHTVTGSICGKRQTRT*LSLLTQ
Trigger: CTGTGTAAGTAGCGATAACCACGTACGAGTCTGTCT...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ACAGTCTGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGGCTCGTGTAAGCAGGTaGTCATGCTGCCTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TVWSGFYDFVLVSARVSRARVSR*SCCLRH
Trigger: ATGCCTCAGGCAGCATGACCACCTGCTTACACGAGC...CCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCAGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
3UTR CAA 72 bp CGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTaGAAGCAGCACCCGCTCCGTGTTTCAGACACGGAC +
Preference number: 4 (lower is better)
Translates to: RGYRYLHSIKCG*KQHPLRVSDTD
Trigger: GTCCGTGTCTGAAACACGGAGCGGGTGCTGCTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTGGTCATACCAAACAGTaGTGTATGGGTGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: TPKHFRPTEVRVPSMLTGGHTKQ*CMGDAE
Trigger: CTCTGCGTCACCCATACATCACTGTTTGGTATGACC...ACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGGGTCATACCAAACAGTaGTGTATGGGTGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: PSTPKHFRPTEVRVPSMLGHTKQ*CMGDAE
Trigger: CTCTGCGTCACCCATACATCACTGTTTGGTATGACC...CAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GTTTTTCTATTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGACTGCTGTCTGTGTCTaGGGCCAGCGTCTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: VFLFGSINSQAFQAHGGETAVCV*GQRLLS
Trigger: ACTGAGCAGACGCTGGCCTCAGACACAGACAGCAGT...CTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTACTTACTGCTGCATCTaGAGGCTGATCTTTTACAAC +
Preference number: 4 (lower is better)
Translates to: GGRWPFQETLHTVTGSICTYCCI*RLIFYN
Trigger: GTTGTAAAAGATCAGCCTTCAGATGCAGCAGTAAGT...ACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACAGTCTGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGGGTGGTCATGCTGCCTaGGGCATTAAGAAAGCATGG +
Preference number: 4 (lower is better)
Translates to: TVWSGFYDFVLVSARVSRGGHAA*GIKKAW
Trigger: CCATGCTTTCTTAATGCCTCAGGCAGCATGACCACC...CCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCAGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR TCA 90 bp TGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGTGGTCAGGTGGTCATGCTGCCTaGGGCATTAAGAAAGCATGG +
Preference number: 4 (lower is better)
Translates to: WSGFYDFVLVSARVSRWSGGHAA*GIKKAW
Trigger: CCATGCTTTCTTAATGCCTCAGGCAGCATGACCACC...TGACCACCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR GCA 90 bp CTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCTCGCGCATTTTCAACCTCAAGAACTGTATCAAATaGAGCACAAACAATCCCTTG +
Preference number: 4 (lower is better)
Translates to: LPGREHHTVQGSSRIFNLKNCIK*STNNPL
Trigger: CAAGGGATTGTTTGTGCTGCATTTGATACAGTTCTT...GAGGTTGAAAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTAGGTGGTGGGGCTTCTaGTTCGGCGGGGTCATACCA +
Preference number: 4 (lower is better)
Translates to: SSKQAILSGLSRARHCVSRWWGF*FGGVIP
Trigger: TGGTATGACCCCGCCGAAGCAGAAGCCCCACCACCT...AGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp CCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTTGGAGAAGGAGTGGCGTTaGTACTTACTGCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: PKHFRPTEVRVPSMLTGLEKEWR*YLLLHL
Trigger: CAGATGCAGCAGTAAGTAGCAACGCCACTCCTTCTC...CAAACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp ATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACTCGAGGCATCAAGACTaGTGTCTGTGTCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: INSQAFQAHGGESSFNADSRHQD*CLCLRP
Trigger: TGGCCTCAGACACAGACAGCAGTCTTGATGCCTCGA...GTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp CCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGTCACAGAACTCTGTCTaGTCTCTGGACTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PSTPKHFRPTEVRVPSMLSQNSV*SLDSAL
Trigger: AAGGGCAGAGTCCAGAGAGCAGACAGAGTTCTGTGA...CAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp ATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACCCAGGGTTTCCAGACTaGTCTCCTGCTCTCACAGAA +
Preference number: 4 (lower is better)
Translates to: INSQAFQAHGGESSFNADPGFPD*SPALTE
Trigger: TTCTGTGAGAGCAGGAGAGCAGTCTGGAAACCCTGG...GTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGTCAGTACTGGGGCTCTaGGTCTCACCTGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMSVLGL*VSPAPI
Trigger: GATGGGAGCAGGTGAGACGCAGAGCCCCAGTACTGA...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp GCACGCTCGCCTCTACCTGGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCGATCAATATGGTCAGTaGCTTGGAATATCACACAAC +
Preference number: 4 (lower is better)
Translates to: ARSPLPGGRWPFQETLHTDQYGQ*LGISHN
Trigger: GTTGTGTGATATTCCAAGGCACTGACCATATTGATC...GGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393360.7
ENST00000452135.7
CDS-3UTR CCA 90 bp ATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACGCACAAACAATCCCTTaGGCCCCAGAGCCAATTGGT +
Preference number: 4 (lower is better)
Translates to: INSQAFQAHGGESSFNADAQTIP*APEPIG
Trigger: ACCAATTGGCTCTGGGGCCCAAGGGATTGTTTGTGC...GTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CACAGTCTGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGCACAAACAATCCCTTaGGCCCCAGAGCCAATTGGT +
Preference number: 4 (lower is better)
Translates to: HSLEWILRLCPRERSCKQAQTIP*APEPIG
Trigger: ACCAATTGGCTCTGGGGCCCAAGGGATTGTTTGTGC...CTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCAGACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR CCA 90 bp CCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGCCAGCGTCTGCTCAGTaGACATGGATGAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: PLKLRPGHGGDSRFLLGWPASAQ*TWMKCH
Trigger: ATGACATTTCATCCATGTCCACTGAGCAGACGCTGG...CCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCTCGCGCATTTTCAACCTCAGAAGCAGCACTACCTaGAAGATTATTTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: LPGREHHTVQGSSRIFNLRSSTT*KIIWHL
Trigger: TAAATGCCAAATAATCTTCCAGGTAGTGCTGCTTCT...GAGGTTGAAAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTAATGCCTCCCAACAATaGAGAGCAACAATAGCAACA +
Preference number: 4 (lower is better)
Translates to: GGRWPFQETLHTVTGSICNASQQ*RATIAT
Trigger: TGTTGCTATTGTTGCTCTCCATTGTTGGGAGGCATT...ACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGGACACGGACTTGGGGTaGGCAAGGGGCCCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: LSGLSRARHCVSYMQNMEDTDLG*ARGPVR
Trigger: TCTTACAGGGCCCCTTGCCCACCCCAAGTCCGTGTC...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACATTTCAGACACGGACTTaGGGTGGGCAAGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RPLKSFPEHSCEKECLPTFQTRT*GGQGAL
Trigger: CAGGGCCCCTTGCCCACCCCAAGTCCGTGTCTGAAA...TGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTAGCCCATACCCAGGATaGCTTCGGGCGCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSSPYPG*LRAPGS
Trigger: ACTACCGGGCGCCCGAAGTCATCCTGGGTATGGGCT...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp ACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTTGATCGATGAAGACTaGGAAGGAGTGGCGTTGCTA +
Preference number: 4 (lower is better)
Translates to: TPKHFRPTEVRVPSMLTGLIDED*EGVALL
Trigger: TAGCAACGCCACTCCTTCTCAGTCTTCATCGATCAA...ACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACACTGCTGTCTGTGTCTaGGGCCAGCGTCTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: SKQAILSGLSRARHCVSYTAVCV*GQRLLS
Trigger: ACTGAGCAGACGCTGGCCTCAGACACAGACAGCAGT...GTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCCAATCCTATCAGGTCTaGGTAGGGCAAGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: FGSINSQAFQAHGGESSFQSYQV*VGQGIV
Trigger: CACAATGCCTTGCCCTACTCAGACCTGATAGGATTG...GAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAATCAGCCTGGCCTCTaGAAACAGACCAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: INSQAFQAHGGESSFNADNQPGL*KQTKEE
Trigger: CTCCTCTTTGGTCTGTTTTCAGAGGCCAGGCTGATT...GTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCATAGCAACAGGCATCTaGATCAGCCTGGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: FGSINSQAFQAHGGESSFIATGI*ISLASE
Trigger: TTCAGAGGCCAGGCTGATTCAGATGCCTGTTGCTAT...GAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTCCCAGAACATTCTTGTaGAAAGGAATGCCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: TPKHFRPTEVRVPSMLTGPRTFL*KGMPPN
Trigger: GTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGG...ACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGTTCCTTCACGTCCTCTaGAGAGTTTCCCAGAACATT +
Preference number: 4 (lower is better)
Translates to: PLKLRPGHGGDSRFLLGWFLHVL*RVSQNI
Trigger: AATGTTCTGGGAAACTCTTCAGAGGACGTGAAGGAA...CCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACCAGGCAGGCAAAACGTaGTCACCACAGCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: SKQAILSGLSRARHCVSYQAGKT*SPQLRS
Trigger: GGAACGGAGCTGTGGTGATCACGTTTTGCCTGCCTG...GTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTGCACAGAGGAGCGAGTaGGCAGAAGGGCGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: DIFCLILSSKQAILSGLSAQRSE*AEGRLR
Trigger: CCGCAGACGCCCTTCTGCTCACTCGCTCCTCTGTGC...ACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAACCCTGAAGCTGGGGTaGGGTATTTCTGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RPLKSFPEHSCEKECLPTTLKLG*GISVEP
Trigger: GGGCTCCACAGAAATACCTCACCCCAGCTTCAGGGT...TGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GCACGCTCGCCTCTACCTGGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCATAACTTTATTCCACTaGTCAATATGGTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: ARSPLPGGRWPFQETLHTITLFH*SIWSVP
Trigger: AGGCACTGACCATATTGATCAGTGGAATAAAGTTAT...GGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393360.7
ENST00000452135.7
CDS-3UTR GCA 90 bp GTTTTTCTATTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGCATGATGCAGCGTCCTaGAATATCCCGAAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VFLFGSINSQAFQAHGGEHDAAS*NIPKGG
Trigger: CCCACCCTTCGGGATATTGCAGGACGCTGCATCATG...CTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp GCATTAAGAAAGCATGGCGGGGCCAAGGTCGCGGGGAAGGATACGGTCAGTGCCAAGAACTGTATCAAATaGAGCACAAACAATCCCTTG +
Preference number: 4 (lower is better)
Translates to: ALRKHGGAKVAGKDTVSAKNCIK*STNNPL
Trigger: CAAGGGATTGTTTGTGCTGCATTTGATACAGTTCTT...GGCACTGACCGTATCCTTCCCCGCGACCTTGGCCCCGCCATGCTTTCTTAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539014.5
CDS-3UTR GCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAGGCGTTGCTACTTACTaGTGCATCTGTGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTGVATY*CICAEG
Trigger: GCCTTCAGCACAGATGCAGCAGTAAGTAGCAACGCC...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
CDS-3UTR GCA 90 bp CGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAGGGAGCATCACACAGTaGAGGGCAGCTCGCGCATTT +
Preference number: 4 (lower is better)
Translates to: RPLKSFPEHSCEKECLPTGSITQ*RAARAF
Trigger: AAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCC...TGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCTCCAGACTGCTCTCCTaGTCTCACAGAACTCTGTCT +
Preference number: 4 (lower is better)
Translates to: FGSINSQAFQAHGGESSFSRLLS*SHRTLS
Trigger: AGACAGAGTTCTGTGAGAGCAGGAGAGCAGTCTGGA...GAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACACCAGGGTTTCCAGACTaGTCTCCTGCTCTCACAGAA +
Preference number: 4 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTPGFPD*SPALTE
Trigger: TTCTGTGAGAGCAGGAGAGCAGTCTGGAAACCCTGG...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp GAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACTCTGAATTGGACCTaGATATTGGTGAAGTCAAAA +
Preference number: 4 (lower is better)
Translates to: ETLHTVTGSICGKWLAECTLNWT*ILVKSK
Trigger: TTTTGACTTCACCAATATGCAGGTCCAATTCAGAGT...GCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452135.7
CDS-3UTR CCA 90 bp GACAGTTTAAAGAAAACAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATCGTGCTAGTCACTCCTaGCTCCGCGGCCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: DSLKKTRCPHKCLGFSRDRASHS*LRGPGS
Trigger: GGAGCCGGGGCCGCGGAGCCAGGAGTGACTAGCACG...ATCACGGCTAAAACCAAGACACTTATGTGGACATCTTGTTTTCTTTAAACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp TTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCCAATATCCCGAAGGGTaGGCAAGTTTCAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: FGSINSQAFQAHGGESSFQYPEG*ASFRSL
Trigger: GAGGGATCTGAAACTTGCCCACCCTTCGGGATATTG...GAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGCAGCACCCGCTCCAATATCCCGAAGGGTaGGCAAGTTTCAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: RGYRYLHSIKCGLKQHPLQYPEG*ASFRSL
Trigger: GAGGGATCTGAAACTTGCCCACCCTTCGGGATATTG...GAGCGGGTGCTGCTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTCCAAACAGTGATGTATaGGTGACGCAGAGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLPNSDV*VTQSFV
Trigger: GACGAAGCTCTGCGTCACCCATACATCACTGTTTGG...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACTCCAACGTTAGGCCATaGATGCAGGAACCTATCTGC +
Preference number: 4 (lower is better)
Translates to: INSQAFQAHGGESSFNADSNVRP*MQEPIC
Trigger: GCAGATAGGTTCCTGCATCCATGGCCTAACGTTGGA...GTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTTCCAACGTTAGGCCATaGATGCAGGAACCTATCTGC +
Preference number: 4 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLSNVRP*MQEPIC
Trigger: GCAGATAGGTTCCTGCATCCATGGCCTAACGTTGGA...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTTGAAACCATTTGCGTaGCACCAAGACCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: TPKHFRPTEVRVPSMLTGLKPFA*HQDPGK
Trigger: TTTGCCAGGGTCTTGGTGCCACGCAAATGGTTTCAA...ACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAGACAGACTCGTACGTaGTTATCGCTACTTACACAG +
Preference number: 4 (lower is better)
Translates to: PLKLRPGHGGDSRFLLGWRQTRT*LSLLTQ
Trigger: CTGTGTAAGTAGCGATAACCACGTACGAGTCTGTCT...CCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTATGCAGCACTTGAGCTaGCCCGTGATGCTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSMQHLS*PVMLRR
Trigger: CCGCCGCAGCATCACGGGCCAGCTCAAGTGCTGCAT...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp CCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGATTTACTGTCGCTCATaGTGCAGCGTCCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: PSTPKHFRPTEVRVPSMLIYCRS*CSVLQY
Trigger: ATATTGCAGGACGCTGCATCATGAGCGACAGTAAAT...CAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGCCCATACCCAGGATaGCTTCGGGCGCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: DIFCLILSSKQAILSGLSSPYPG*LRAPGS
Trigger: ACTACCGGGCGCCCGAAGTCATCCTGGGTATGGGCT...ACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGCTTCATGAACTCTGCTaGTGGTGTTCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMLHELC*WCSQLL
Trigger: GAGCAGCTGGGAACACCATCAGCAGAGTTCATGAAG...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGTCTCGCTCAGATTCTaGTGGGAATATCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLVSLRF*WEYPIW
Trigger: CCAGATTGGATATTCCCATCAGAATCTGAGCGAGAC...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAGGTCATACCAAACAGTaGTGTATGGGTGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTGHTKQ*CMGDAE
Trigger: CTCTGCGTCACCCATACATCACTGTTTGGTATGACC...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTTTGATCGATGAAGACTaGGAAGGAGTGGCGTTGCTA +
Preference number: 4 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLLIDED*EGVALL
Trigger: TAGCAACGCCACTCCTTCTCAGTCTTCATCGATCAA...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACATTGATCGATGAAGACTaGGAAGGAGTGGCGTTGCTA +
Preference number: 4 (lower is better)
Translates to: STPKHFRPTEVRVPSMLTLIDED*EGVALL
Trigger: TAGCAACGCCACTCCTTCTCAGTCTTCATCGATCAA...TGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACCCCAGAACATTCTTGTaGAAAGGAATGCCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: INSQAFQAHGGESSFNADPRTFL*KGMPPN
Trigger: GTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGG...GTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTCATGATGCAACCCACTaGCCAGATATCAACGTTCTC +
Preference number: 4 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLHDATH*PDINVL
Trigger: GAGAACGTTGATATCTGGTCAGTGGGTTGCATCATG...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393360.7
ENST00000452135.7
CDS-3UTR GCA 90 bp TTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAATGGAGAGCAACAATAGGTGGTGGGGCTTCTaGTTCGGCGGGGTCATACCA +
Preference number: 4 (lower is better)
Translates to: FPEHSCEKECLPTMESNNRWWGF*FGGVIP
Trigger: TGGTATGACCCCGCCGAAGCAGAAGCCCCACCACCT...ATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTTACAACACCATTCTTaGTTCTTTCTTCCCAATCCA +
Preference number: 4 (lower is better)
Translates to: RWPFQETLHTVTGSICGKLQHHS*FFLPNP
Trigger: TGGATTGGGAAGAAAGAAGCAAGAATGGTGTTGTAA...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAACGTTAGGCCATGGATaGAGGAACCTATCTGCCATC +
Preference number: 4 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTTLGHG*RNLSAI
Trigger: GATGGCAGATAGGTTCCTGCATCCATGGCCTAACGT...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp CCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGTCTTGTGAAAAGGAATaGCTCCCAACAATGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PSTPKHFRPTEVRVPSMLSCEKE*LPTMES
Trigger: GCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGA...CAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGCAGCACCCGCTCAAGACTGAGAAGGAGTaGCGTTGCTACTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: RGYRYLHSIKCGLKQHPLKTEKE*RCYLLL
Trigger: CAGCAGTAAGTAGCAACGCCACTCCTTCTCAGTCTT...GAGCGGGTGCTGCTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGTTCCAAAGTGCTAGATaGGCAAGTCCAAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: PSTPKHFRPTEVRVPSMLFQSAR*ASPSKH
Trigger: ATGCTTGCTTGGACTTGCCCATCTAGCACTTTGGAA...CAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACGCATCTGAATCAGCCTaGCCTCTGAAAACAGACCAA +
Preference number: 4 (lower is better)
Translates to: INSQAFQAHGGESSFNADASESA*PLKTDQ
Trigger: TTGGTCTGTTTTCAGAGGCCAGGCTGATTCAGATGC...GTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GTTTTTCTATTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGTCCATCTGTGGCAAGTaGCTCGCTGAATGCACAGAG +
Preference number: 4 (lower is better)
Translates to: VFLFGSINSQAFQAHGGESICGK*LAECTE
Trigger: CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGA...CTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGACTGAGACCTGGACATaGGGGAGACAGTCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMTETWT*GRQSFP
Trigger: AGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGT...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GTTTTTCTATTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGACTGAGACCTGGACATaGGGGAGACAGTCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VFLFGSINSQAFQAHGGETETWT*GRQSFP
Trigger: AGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGT...CTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp TTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAATGGAGAGCAACAATTTTCAGACACGGACTTaGGGTGGGCAAGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: FPEHSCEKECLPTMESNNFQTRT*GGQGAL
Trigger: CAGGGCCCCTTGCCCACCCCAAGTCCGTGTCTGAAA...ATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACAGTCTGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGAACGTTTTAGGACAGTaGAGGTTGAGTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: TVWSGFYDFVLVSARVSRNVLGQ*RLSLPL
Trigger: AAGTGGCAGACTCAACCTTCACTGTCCTAAAACGTT...CCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCAGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR TCA 90 bp CCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTTGGACGGCTTAGTTTCTTaGCTGCAACATTTATCCCAA +
Preference number: 4 (lower is better)
Translates to: PKHFRPTEVRVPSMLTGLDGLVS*LQHLSQ
Trigger: TTGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTC...CAAACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACACTTCAGGGTGCAGTCTaGTTTCACAACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: STPKHFRPTEVRVPSMLTLQGAV*FHNNVA
Trigger: AGCAACATTGTTGTGAAATCAGACTGCACCCTGAAG...TGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGTGGTCACTTCAGGGTGCAGTCTaGTTTCACAACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: WSGFYDFVLVSARVSRWSLQGAV*FHNNVA
Trigger: AGCAACATTGTTGTGAAATCAGACTGCACCCTGAAG...TGACCACCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR TCA 90 bp ACAGAGATCCGCTTGTCAGGATCAATCACTAACATTTTTGATAACAGATCTCTGAGCCCATACCCAGGATaGCTTCGGGCGCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: TEIRLSGSITNIFDNRSLSPYPG*LRAPGS
Trigger: ACTACCGGGCGCCCGAAGTCATCCTGGGTATGGGCT...CAGAGATCTGTTATCAAAAATGTTAGTGATTGATCCTGACAAGCGGATCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR TCA 90 bp CGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGCAGCACCCGCTCGCTGAAGTTTCTTCATaGACTCTGCTGATGGTGTTC +
Preference number: 4 (lower is better)
Translates to: RGYRYLHSIKCGLKQHPLAEVSS*TLLMVF
Trigger: GAACACCATCAGCAGAGTTCATGAAGAAACTTCAGC...GAGCGGGTGCTGCTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGCTGAAGTTTCTTCATaGACTCTGCTGATGGTGTTC +
Preference number: 4 (lower is better)
Translates to: STPKHFRPTEVRVPSMLTAEVSS*TLLMVF
Trigger: GAACACCATCAGCAGAGTTCATGAAGAAACTTCAGC...TGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAATGTCATTGATCGATaGAGACTGAGAAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: INSQAFQAHGGESSFNADNVIDR*RLRRSG
Trigger: GCCACTCCTTCTCAGTCTTCATCGATCAATGACATT...GTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GTTTTTCTATTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGCAATCCTATCAGGTCTaGGTAGGGCAAGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: VFLFGSINSQAFQAHGGEQSYQV*VGQGIV
Trigger: CACAATGCCTTGCCCTACTCAGACCTGATAGGATTG...CTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAATGGAGAGCAACAATTGGCAAGTGGCTCGCTaGATGCACAGAGGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: FPEHSCEKECLPTMESNNWQVAR*MHRGAS
Trigger: ACTCGCTCCTCTGTGCATTCAGCGAGCCACTTGCCA...ATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATAATTCTCAGCCCCAAATGGCAAGTGGCTCGCTaGATGCACAGAGGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: QDVHISVLVLAVIILSPKWQVAR*MHRGAS
Trigger: ACTCGCTCCTCTGTGCATTCAGCGAGCCACTTGCCA...TTTGGGGCTGAGAATTATCACGGCTAAAACCAAGACACTTATGTGGACATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGCTGCATCTGAAGGCTaGTCTTTTACAACACCATTC +
Preference number: 4 (lower is better)
Translates to: STPKHFRPTEVRVPSMLTAASEG*SFTTPF
Trigger: GAATGGTGTTGTAAAAGATCAGCCTTCAGATGCAGC...TGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347470.8
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGCTGCATCTGAAGGCTaGTCTTTTACAACACCATTC +
Preference number: 4 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLAASEG*SFTTPF
Trigger: GAATGGTGTTGTAAAAGATCAGCCTTCAGATGCAGC...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp GACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGTGGTGGGGCTTCTaGTTCGGCGGGGTCATACCA +
Preference number: 4 (lower is better)
Translates to: DIFCLILSSKQAILSGLSRWWGF*FGGVIP
Trigger: TGGTATGACCCCGCCGAAGCAGAAGCCCCACCACCT...ACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp CGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAGGCGTTGCTACTTACTaGTGCATCTGTGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: RPLKSFPEHSCEKECLPTGVATY*CICAEG
Trigger: GCCTTCAGCACAGATGCAGCAGTAAGTAGCAACGCC...TGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
CDS-3UTR GCA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGTCGAGGCATCAAGACTaGTGTCTGTGTCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LSGLSRARHCVSYMQNMESRHQD*CLCLRP
Trigger: TGGCCTCAGACACAGACAGCAGTCTTGATGCCTCGA...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TCAAGCAGCACTAAGCAAAACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTAGAGCAGAAGGGCGTCTaGGGGTGCCTCGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: SSSTKQNLKLYRAVKLNVEQKGV*GCLVPR
Trigger: ACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTC...TACATTCAGCTTTACTGCACGATACAATTTTAAGTTTTGCTTAGTGCTGCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp AACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTACAATCATCCCAGACAAGAGAGCAGAAGGGCGTCTaGGGGTGCCTCGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: NLKLYRAVKLNVQSSQTREQKGV*GCLVPR
Trigger: ACGGGGGACGAGGCACCCGCAGACGCCCTTCTGCTC...TCTTGTCTGGGATGATTGTACATTCAGCTTTACTGCACGATACAATTTTAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp GTTTTTCTATTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGTCCAGACTGCTCTCCTaGTCTCACAGAACTCTGTCT +
Preference number: 4 (lower is better)
Translates to: VFLFGSINSQAFQAHGGESRLLS*SHRTLS
Trigger: AGACAGAGTTCTGTGAGAGCAGGAGAGCAGTCTGGA...CTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp ATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACATCTCTGGCTTGACTTaGGTTCTCTTTGTAGCCCAT +
Preference number: 4 (lower is better)
Translates to: INSQAFQAHGGESSFNADISGLT*VLFVAH
Trigger: ATGGGCTACAAAGAGAACGCAAGTCAAGCCAGAGAT...GTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347470.8
CDS-3UTR GCA 90 bp TGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGTGGTCAAAGCAACCATCAATCTaGCCAAGGATGGAGACCAAT +
Preference number: 4 (lower is better)
Translates to: WSGFYDFVLVSARVSRWSKQPSI*PRMETN
Trigger: ATTGGTCTCCATCCTTGGGCAGATTGATGGTTGCTT...TGACCACCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425491.6
CDS-3UTR CCA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGCCAAACAGTGATGTATaGGTGACGCAGAGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMPNSDV*VTQSFV
Trigger: GACGAAGCTCTGCGTCACCCATACATCACTGTTTGG...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAAGACTGAGAAGGAGTaGCGTTGCTACTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTKTEKE*RCYLLL
Trigger: CAGCAGTAAGTAGCAACGCCACTCCTTCTCAGTCTT...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGTCCAACGTTAGGCCATaGATGCAGGAACCTATCTGC +
Preference number: 4 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMSNVRP*MQEPIC
Trigger: GCAGATAGGTTCCTGCATCCATGGCCTAACGTTGGA...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp TCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTCCATCTGTGGCAAGTaGCTCGCTGAATGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SSKQAILSGLSRARHCVSSICGK*LAECTE
Trigger: CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGA...AGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGCAGTCGTTTCCTTCTTaGCTGGAAACTAAGTCAACA +
Preference number: 4 (lower is better)
Translates to: PSTPKHFRPTEVRVPSMLQSFPS*LETKST
Trigger: TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTG...CAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp TCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACCTTGAAACTGAGACCTaGACATGGGGGAGACAGTCG +
Preference number: 4 (lower is better)
Translates to: SKQAILSGLSRARHCVSYLETET*TWGRQS
Trigger: CGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAG...GTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTTCCTCCTCTCAGTACTaGGGCTCTGCGTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: ILSSKQAILSGLSRARHCSSSQY*GSASHL
Trigger: CAGGTGAGACGCAGAGCCCCAGTACTGAGAGGAGGA...ACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGATATGGTCAGTGCCTTaGAATATCACACAACCTTTC +
Preference number: 4 (lower is better)
Translates to: PLKLRPGHGGDSRFLLGWIWSVP*NITQPF
Trigger: GAAAGGTTGTGTGATATTCCAAGGCACTGACCATAT...CCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393360.7
ENST00000452135.7
CDS-3UTR CCA 90 bp TCGCGGGGAAGGATACGGTCAGTGCCTTGGAATATCACACAACCTTTCACCAGCATACGGTCAGTGCCTTaGAATATCACACAACCTTTC +
Preference number: 4 (lower is better)
Translates to: SRGRIRSVPWNITQPFTSIRSVP*NITQPF
Trigger: GAAAGGTTGTGTGATATTCCAAGGCACTGACCGTAT...GCTGGTGAAAGGTTGTGTGATATTCCAAGGCACTGACCGTATCCTTCCCCGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539014.5
CDS-3UTR CCA 90 bp TCGCGGGGAAGGATACGGTCAGTGCCTTGGAATATCACACAACCTTTCACCAGCGAACACAGTCTGGAGTaGATTTTACGACTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SRGRIRSVPWNITQPFTSEHSLE*ILRLCP
Trigger: AGGACAAAGTCGTAAAATCCACTCCAGACTGTGTTC...GCTGGTGAAAGGTTGTGTGATATTCCAAGGCACTGACCGTATCCTTCCCCGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539014.5
CDS-3UTR CCA 90 bp ACAGTCTGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGCGGTTTGTAGCAATCTaGGGTTTTAGTGCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: TVWSGFYDFVLVSARVSRRFVAI*GFSAKE
Trigger: CTCTTTGGCACTAAAACCCCAGATTGCTACAAACCG...CCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCAGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539014.5
CDS-3UTR TCA 90 bp TTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCGACGGCTTAGTTTCTTaGCTGCAACATTTATCCCAA +
Preference number: 4 (lower is better)
Translates to: FGSINSQAFQAHGGESSFDGLVS*LQHLSQ
Trigger: TTGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTC...GAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACAGTCTGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGGACGGCTTAGTTTCTTaGCTGCAACATTTATCCCAA +
Preference number: 4 (lower is better)
Translates to: TVWSGFYDFVLVSARVSRDGLVS*LQHLSQ
Trigger: TTGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTC...CCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCAGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR TCA 90 bp ACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTGGCTTCAAATCTCTATaGATTATACCAGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: TPKHFRPTEVRVPSMLTGGFKSL*IIPAEC
Trigger: GCATTCAGCTGGTATAATTCATAGAGATTTGAAGCC...ACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CTTTCACTTAGGTCCTTTGTAATGTGCTTCAGTTCTTACTTTGGGGGAAAATATAGCCCATACCCAGGATaGCTTCGGGCGCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: LSLRSFVMCFSSYFGGKYSPYPG*LRAPGS
Trigger: ACTACCGGGCGCCCGAAGTCATCCTGGGTATGGGCT...ATATTTTCCCCCAAAGTAAGAACTGAAGCACATTACAAAGGACCTAAGTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR TCA 90 bp GACAGTTTAAAGAAAACAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATAGCCCATACCCAGGATaGCTTCGGGCGCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: DSLKKTRCPHKCLGFSRDSPYPG*LRAPGS
Trigger: ACTACCGGGCGCCCGAAGTCATCCTGGGTATGGGCT...ATCACGGCTAAAACCAAGACACTTATGTGGACATCTTGTTTTCTTTAAACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAGCTGAAGTTTCTTCATaGACTCTGCTGATGGTGTTC +
Preference number: 4 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTAEVSS*TLLMVF
Trigger: GAACACCATCAGCAGAGTTCATGAAGAAACTTCAGC...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGACAGTGATGTATGGGTaGCGCAGAGCTTCGTCTACA +
Preference number: 4 (lower is better)
Translates to: LSGLSRARHCVSYMQNMETVMYG*RRASST
Trigger: TGTAGACGAAGCTCTGCGTCACCCATACATCACTGT...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAGGTCATACCAAACAGTaGTGTATGGGTGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: RPLKSFPEHSCEKECLPTGHTKQ*CMGDAE
Trigger: CTCTGCGTCACCCATACATCACTGTTTGGTATGACC...TGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GTTTTTCTATTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGCTGCTGCATCTGTGCTaGAGGCTGATCTTTTACAAC +
Preference number: 4 (lower is better)
Translates to: VFLFGSINSQAFQAHGGELLHLC*RLIFYN
Trigger: GTTGTAAAAGATCAGCCTTCAGCACAGATGCAGCAG...CTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
CDS-3UTR TCA 90 bp ACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTGGATGAAATGTCATTaGTCGATGAAGACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: TPKHFRPTEVRVPSMLTGWMKCH*SMKTEK
Trigger: CTTCTCAGTCTTCATCGATCAATGACATTTCATCCA...ACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGTGGATGAAATGTCATTaGTCGATGAAGACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PSTPKHFRPTEVRVPSMLWMKCH*SMKTEK
Trigger: CTTCTCAGTCTTCATCGATCAATGACATTTCATCCA...CAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTCAATCCTATCAGGTCTaGGTAGGGCAAGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: SSKQAILSGLSRARHCVSQSYQV*VGQGIV
Trigger: CACAATGCCTTGCCCTACTCAGACCTGATAGGATTG...AGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAAATCAGCCTGGCCTCTaGAAACAGACCAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RPLKSFPEHSCEKECLPTNQPGL*KQTKEE
Trigger: CTCCTCTTTGGTCTGTTTTCAGAGGCCAGGCTGATT...TGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTATAGCAACAGGCATCTaGATCAGCCTGGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSKQAILSGLSRARHCVSIATGI*ISLASE
Trigger: TTCAGAGGCCAGGCTGATTCAGATGCCTGTTGCTAT...AGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATAGCAACAGGCATCTaGATCAGCCTGGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SKQAILSGLSRARHCVSYIATGI*ISLASE
Trigger: TTCAGAGGCCAGGCTGATTCAGATGCCTGTTGCTAT...GTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTGCTCCGTTCCTGCAGTaGCACTTAACATACTCAGCA +
Preference number: 4 (lower is better)
Translates to: SSKQAILSGLSRARHCVSAPFLQ*HLTYSA
Trigger: TGCTGAGTATGTTAAGTGTCACTGCAGGAACGGAGC...AGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCAGACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGACCCTGAAGCTGGGGTaGGGTATTTCTGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SDIFCLILSSKQAILSGLTLKLG*GISVEP
Trigger: GGGCTCCACAGAAATACCTCACCCCAGCTTCAGGGT...CAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAACTTACTGCTGCATCTaGAGGCTGATCTTTTACAAC +
Preference number: 4 (lower is better)
Translates to: STPKHFRPTEVRVPSMLTTYCCI*RLIFYN
Trigger: GTTGTAAAAGATCAGCCTTCAGATGCAGCAGTAAGT...TGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347470.8
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTGGCAAGGCACTGCAATaGTGGCGCCAAACAATCCCT +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSGKALQ*WRQTIP
Trigger: AGGGATTGTTTGGCGCCATCATTGCAGTGCCTTGCC...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp ACAGTCTGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGGCTGTATCTCTAACATaGCTTGCTGACTACAGTATG +
Preference number: 4 (lower is better)
Translates to: TVWSGFYDFVLVSARVSRAVSLT*LADYSM
Trigger: CATACTGTAGTCAGCAAGTCATGTTAGAGATACAGC...CCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCAGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR TCA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTAAGCCACAAGCACCATaGATGACGTTAAGTAACATG +
Preference number: 4 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLKPQAP*MTLSNM
Trigger: CATGTTACTTAACGTCATTCATGGTGCTTGTGGCTT...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452135.7
CDS-3UTR GCA 90 bp CGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAGAGAAGGAGTGGCGTTaGTACTTACTGCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: RPLKSFPEHSCEKECLPTEKEWR*YLLLHL
Trigger: CAGATGCAGCAGTAAGTAGCAACGCCACTCCTTCTC...TGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp ATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTAAGTGGCTCGCTGAATaGACAGAGGAGCGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: ILSSKQAILSGLSRARHCKWLAE*TEERVS
Trigger: GCTCACTCGCTCCTCTGTGCATTCAGCGAGCCACTT...ACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACTCCAGACTGCTCTCCTaGTCTCACAGAACTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SKQAILSGLSRARHCVSYSRLLS*SHRTLS
Trigger: AGACAGAGTTCTGTGAGAGCAGGAGAGCAGTCTGGA...GTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp GACAGTTTAAAGAAAACAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATGCTCTGCGTCTCACCTaGTCCCATCTCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: DSLKKTRCPHKCLGFSRDALRLT*SHLQAH
Trigger: GTGGGCCTGGAGATGGGAGCAGGTGAGACGCAGAGC...ATCACGGCTAAAACCAAGACACTTATGTGGACATCTTGTTTTCTTTAAACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TCAGACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGTCAGTACTGGGGCTCTaGGTCTCACCTGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: SDIFCLILSSKQAILSGLSVLGL*VSPAPI
Trigger: GATGGGAGCAGGTGAGACGCAGAGCCCCAGTACTGA...CAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp TCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTCAATATCCCGAAGGGTaGGCAAGTTTCAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: SSKQAILSGLSRARHCVSQYPEG*ASFRSL
Trigger: GAGGGATCTGAAACTTGCCCACCCTTCGGGATATTG...AGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGCCAAACAGTGATGTATaGGTGACGCAGAGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: LSGLSRARHCVSYMQNMEPNSDV*VTQSFV
Trigger: GACGAAGCTCTGCGTCACCCATACATCACTGTTTGG...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACCCAAGCAAGCATTTGTaGTCACATGCACATACATCT +
Preference number: 4 (lower is better)
Translates to: INSQAFQAHGGESSFNADPSKHL*SHAHTS
Trigger: AGATGTATGTGCATGTGACCACAAATGCTTGCTTGG...GTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACATTCCAAAGTGCTAGATaGGCAAGTCCAAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTFQSAR*ASPSKH
Trigger: ATGCTTGCTTGGACTTGCCCATCTAGCACTTTGGAA...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGCAGCACCCGCTCAGAAAATCAAGAACGTaGTATTGGCCGAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: RGYRYLHSIKCGLKQHPLRKSRT*YWPRES
Trigger: ACTTTCCCTCGGCCAATACCACGTTCTTGATTTTCT...GAGCGGGTGCTGCTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GTTTTTCTATTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGGCATCTGAATCAGCCTaGCCTCTGAAAACAGACCAA +
Preference number: 4 (lower is better)
Translates to: VFLFGSINSQAFQAHGGEASESA*PLKTDQ
Trigger: TTGGTCTGTTTTCAGAGGCCAGGCTGATTCAGATGC...CTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CATTTTGTAAAATTCCACTCCAACGTTAGGCCATGGATGCAGGAACCTATCTGCCTACCTGGTGGAAGATaGCCTTTCCAGGAAACCCTC +
Preference number: 4 (lower is better)
Translates to: HFVKFHSNVRPWMQEPICLPGGR*PFQETL
Trigger: GAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAG...GCAGATAGGTTCCTGCATCCATGGCCTAACGTTGGAGTGGAATTTTACAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATAATTCTCAGCCCCAAAACGCTCGCCTCTACCTaGTGGAAGATGGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QDVHISVLVLAVIILSPKTLAST*WKMAFP
Trigger: TGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGT...TTTGGGGCTGAGAATTATCACGGCTAAAACCAAGACACTTATGTGGACATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp TTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAATGGAGAGCAACAATGGTGAGGTATTTCTGTaGAGCCCTGTGGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: FPEHSCEKECLPTMESNNGEVFL*SPVACP
Trigger: AGGACAGGCCACAGGGCTCCACAGAAATACCTCACC...ATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GTTTTTCTATTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGTTGAAACCATTTGCGTaGCACCAAGACCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: VFLFGSINSQAFQAHGGELKPFA*HQDPGK
Trigger: TTTGCCAGGGTCTTGGTGCCACGCAAATGGTTTCAA...CTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ACTCTGCCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTCAGTCGTTTCCTTCTTaGCTGGAAACTAAGTCAACA +
Preference number: 4 (lower is better)
Translates to: TLPLKLRPGHGGDSRFLLQSFPS*LETKST
Trigger: TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTG...AAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGGCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTCGCCAAACAATCCCTTaGGCCCCAGAGCCAATTGGT +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSRQTIP*APEPIG
Trigger: ACCAATTGGCTCTGGGGCCCAAGGGATTGTTTGGCG...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR CCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAATGCAGCACTTGAGCTaGCCCGTGATGCTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGMQHLS*PVMLRR
Trigger: CCGCCGCAGCATCACGGGCCAGCTCAAGTGCTGCAT...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR CCA 90 bp TGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGTGGTCAGAACACAGTCTGGAGTaGATTTTACGACTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: WSGFYDFVLVSARVSRWSEHSLE*ILRLCP
Trigger: AGGACAAAGTCGTAAAATCCACTCCAGACTGTGTTC...TGACCACCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR TCA 90 bp GTTTTTCTATTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAACGTTTTAGGACAGTaGAGGTTGAGTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: VFLFGSINSQAFQAHGGENVLGQ*RLSLPL
Trigger: AAGTGGCAGACTCAACCTTCACTGTCCTAAAACGTT...CTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CACAGTCTGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGGCTTCAAATCTCTATaGATTATACCAGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: HSLEWILRLCPRERSCKQGFKSL*IIPAEC
Trigger: GCATTCAGCTGGTATAATTCATAGAGATTTGAAGCC...CTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCAGACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR TCA 90 bp CGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGCAGCACCCGCTCGGCTTCAAATCTCTATaGATTATACCAGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: RGYRYLHSIKCGLKQHPLGFKSL*IIPAEC
Trigger: GCATTCAGCTGGTATAATTCATAGAGATTTGAAGCC...GAGCGGGTGCTGCTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTCTTCATGAACTCTGCTaGTGGTGTTCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSLHELC*WCSQLL
Trigger: GAGCAGCTGGGAACACCATCAGCAGAGTTCATGAAG...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp ATCTCTAGTGAGCATTTTGTAAAATTCCACTCCAACGTTAGGCCATGGATGCAGCTTCATGAACTCTGCTaGTGGTGTTCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ISSEHFVKFHSNVRPWMQLHELC*WCSQLL
Trigger: GAGCAGCTGGGAACACCATCAGCAGAGTTCATGAAG...CTGCATCCATGGCCTAACGTTGGAGTGGAATTTTACAAAATGCTCACTAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAATCTGTGCTGAAGGCTaGTCTTTTACAACACCATTC +
Preference number: 4 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTICAEG*SFTTPF
Trigger: GAATGGTGTTGTAAAAGATCAGCCTTCAGCACAGAT...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
CDS-3UTR TCA 90 bp CCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTTGATAACTTTATTCCACTaGTCAATATGGTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: PKHFRPTEVRVPSMLTGLITLFH*SIWSVP
Trigger: AGGCACTGACCATATTGATCAGTGGAATAAAGTTAT...CAAACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393360.7
ENST00000452135.7
CDS-3UTR TCA 90 bp TTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAATGGAGAGCAACAATAACACAGACGTCAGATaGACTTGGCTCATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FPEHSCEKECLPTMESNNNTDVR*TWLIPG
Trigger: GCCTGGGATGAGCCAAGTTCATCTGACGTCTGTGTT...ATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452135.7
CDS-3UTR GCA 90 bp GACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTCATGATGCAGCGTCCTaGAATATCCCGAAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: DIFCLILSSKQAILSGLSHDAAS*NIPKGG
Trigger: CCCACCCTTCGGGATATTGCAGGACGCTGCATCATG...ACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp CCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGAAGAACTGTATCAAATaGAGCACAAACAATCCCTTG +
Preference number: 4 (lower is better)
Translates to: PSTPKHFRPTEVRVPSMLKNCIK*STNNPL
Trigger: CAAGGGATTGTTTGTGCTGCATTTGATACAGTTCTT...CAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCTTCACCTACTCTAACTaGTCACCTGAAATGATCTTG +
Preference number: 4 (lower is better)
Translates to: FGSINSQAFQAHGGESSFFTYSN*SPEMIL
Trigger: CAAGATCATTTCAGGTGAGCAGTTAGAGTAGGTGAA...GAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TCAGACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAAGTGGCTCGCTGAATaGACAGAGGAGCGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: SDIFCLILSSKQAILSGLKWLAE*TEERVS
Trigger: GCTCACTCGCTCCTCTGTGCATTCAGCGAGCCACTT...CAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp ATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTCCAGGGTTTCCAGACTaGTCTCCTGCTCTCACAGAA +
Preference number: 4 (lower is better)
Translates to: ILSSKQAILSGLSRARHCPGFPD*SPALTE
Trigger: TTCTGTGAGAGCAGGAGAGCAGTCTGGAAACCCTGG...ACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGCACAAACAATCCCTTaGGCCCCAGAGCCAATTGGT +
Preference number: 4 (lower is better)
Translates to: ILSSKQAILSGLSRARHCAQTIP*APEPIG
Trigger: ACCAATTGGCTCTGGGGCCCAAGGGATTGTTTGTGC...ACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp TCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACGGGAACAGGACTTTATaGAGGACCATTTCTGCCATG +
Preference number: 4 (lower is better)
Translates to: SKQAILSGLSRARHCVSYGNRTL*RTISAM
Trigger: CATGGCAGAAATGGTCCTCCATAAAGTCCTGTTCCC...GTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000455781.5
CDS-3UTR CCA 90 bp CCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGGATTCCAGGATACTTTaGTCTGTTTTCGACATAATT +
Preference number: 4 (lower is better)
Translates to: PLKLRPGHGGDSRFLLGWDSRIL*SVFDII
Trigger: AATTATGTCGAAAACAGACCAAAGTATCCTGGAATC...CCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GACAGACTCGTACGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGAAGACTGAGAAGGAGTaGCGTTGCTACTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: DRLVRGYRYLHSIKCGLKKTEKE*RCYLLL
Trigger: CAGCAGTAAGTAGCAACGCCACTCCTTCTCAGTCTT...CTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACGTACGAGTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGCCAGCGTCTGCTCAGTaGACATGGATGAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: LSGLSRARHCVSYMQNMEPASAQ*TWMKCH
Trigger: ATGACATTTCATCCATGTCCACTGAGCAGACGCTGG...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GTTTTTCTATTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGTTCCAAAGTGCTAGATaGGCAAGTCCAAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: VFLFGSINSQAFQAHGGEFQSAR*ASPSKH
Trigger: ATGCTTGCTTGGACTTGCCCATCTAGCACTTTGGAA...CTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTAGAAGCAGCACTACCTaGAAGATTATTTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: TPKHFRPTEVRVPSMLTGRSSTT*KIIWHL
Trigger: TAAATGCCAAATAATCTTCCAGGTAGTGCTGCTTCT...ACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGGCATCTGAATCAGCCTaGCCTCTGAAAACAGACCAA +
Preference number: 4 (lower is better)
Translates to: LSGLSRARHCVSYMQNMEASESA*PLKTDQ
Trigger: TTGGTCTGTTTTCAGAGGCCAGGCTGATTCAGATGC...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTCCAATAAGATATAACTaGTGCAGAGAGAGCCATATA +
Preference number: 4 (lower is better)
Translates to: TPKHFRPTEVRVPSMLTGPIRYN*CRESHI
Trigger: TATATGGCTCTCTCTGCACCAGTTATATCTTATTGG...ACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp TTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAATGGAGAGCAACAATTCCATCTGTGGCAAGTaGCTCGCTGAATGCACAGAG +
Preference number: 4 (lower is better)
Translates to: FPEHSCEKECLPTMESNNSICGK*LAECTE
Trigger: CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGA...ATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGAGACAGACTCGTACGTaGTTATCGCTACTTACACAG +
Preference number: 4 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMRQTRT*LSLLTQ
Trigger: CTGTGTAAGTAGCGATAACCACGTACGAGTCTGTCT...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp TTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCATATGGTCAGTGCCTTaGAATATCACACAACCTTTC +
Preference number: 4 (lower is better)
Translates to: FGSINSQAFQAHGGESSFIWSVP*NITQPF
Trigger: GAAAGGTTGTGTGATATTCCAAGGCACTGACCATAT...GAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393360.7
ENST00000452135.7
CDS-3UTR TCA 90 bp TCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACCTTCAGGGTGCAGTCTaGTTTCACAACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: SKQAILSGLSRARHCVSYLQGAV*FHNNVA
Trigger: AGCAACATTGTTGTGAAATCAGACTGCACCCTGAAG...GTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACACTTCAGGGTGCAGTCTaGTTTCACAACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: RPLKSFPEHSCEKECLPTLQGAV*FHNNVA
Trigger: AGCAACATTGTTGTGAAATCAGACTGCACCCTGAAG...TGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCAGACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGCTTCATGAACTCTGCTaGTGGTGTTCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SDIFCLILSSKQAILSGLLHELC*WCSQLL
Trigger: GAGCAGCTGGGAACACCATCAGCAGAGTTCATGAAG...CAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAGCTGAAGTTTCTTCATaGACTCTGCTGATGGTGTTC +
Preference number: 4 (lower is better)
Translates to: RPLKSFPEHSCEKECLPTAEVSS*TLLMVF
Trigger: GAACACCATCAGCAGAGTTCATGAAGAAACTTCAGC...TGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GTTTTTCTATTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGATCTGTGCTGAAGGCTaGTCTTTTACAACACCATTC +
Preference number: 4 (lower is better)
Translates to: VFLFGSINSQAFQAHGGEICAEG*SFTTPF
Trigger: GAATGGTGTTGTAAAAGATCAGCCTTCAGCACAGAT...CTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000393360.7
CDS-3UTR TCA 90 bp TCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACAATGTCATTGATCGATaGAGACTGAGAAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SKQAILSGLSRARHCVSYNVIDR*RLRRSG
Trigger: GCCACTCCTTCTCAGTCTTCATCGATCAATGACATT...GTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTAATGTCATTGATCGATaGAGACTGAGAAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SSKQAILSGLSRARHCVSNVIDR*RLRRSG
Trigger: GCCACTCCTTCTCAGTCTTCATCGATCAATGACATT...AGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGAATGTCATTGATCGATaGAGACTGAGAAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LSGLSRARHCVSYMQNMENVIDR*RLRRSG
Trigger: GCCACTCCTTCTCAGTCTTCATCGATCAATGACATT...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACATGGATGAAATGTCATTaGTCGATGAAGACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTWMKCH*SMKTEK
Trigger: CTTCTCAGTCTTCATCGATCAATGACATTTCATCCA...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GACAGACTCGTACGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGTTCCTTCACGTCCTCTaGAGAGTTTCCCAGAACATT +
Preference number: 4 (lower is better)
Translates to: DRLVRGYRYLHSIKCGLKFLHVL*RVSQNI
Trigger: AATGTTCTGGGAAACTCTTCAGAGGACGTGAAGGAA...CTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACGTACGAGTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ATCTCTAGTGAGCATTTTGTAAAATTCCACTCCAACGTTAGGCCATGGATGCAGGCTCCGTTCCTGCAGTaGCACTTAACATACTCAGCA +
Preference number: 4 (lower is better)
Translates to: ISSEHFVKFHSNVRPWMQAPFLQ*HLTYSA
Trigger: TGCTGAGTATGTTAAGTGTCACTGCAGGAACGGAGC...CTGCATCCATGGCCTAACGTTGGAGTGGAATTTTACAAAATGCTCACTAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GACAGTTTAAAGAAAACAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATGCATTAAATGCGGGTTaGAGCAGCACCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: DSLKKTRCPHKCLGFSRDALNAG*SSTRSV
Trigger: CACGGAGCGGGTGCTGCTTCAACCCGCATTTAATGC...ATCACGGCTAAAACCAAGACACTTATGTGGACATCTTGTTTTCTTTAAACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGACTTACTGCTGCATCTaGAGGCTGATCTTTTACAAC +
Preference number: 4 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMTYCCI*RLIFYN
Trigger: GTTGTAAAAGATCAGCCTTCAGATGCAGCAGTAAGT...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGTGGTCATCTAACATGACTTGCTaGCTACAGTATGAGTTTATC +
Preference number: 4 (lower is better)
Translates to: WSGFYDFVLVSARVSRWSSNMTC*LQYEFI
Trigger: GATAAACTCATACTGTAGTCAGCAAGTCATGTTAGA...TGACCACCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR GCA 90 bp ACAGTCTGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGAAGAACTGTATCAAATaGAGCACAAACAATCCCTTG +
Preference number: 4 (lower is better)
Translates to: TVWSGFYDFVLVSARVSRKNCIK*STNNPL
Trigger: CAAGGGATTGTTTGTGCTGCATTTGATACAGTTCTT...CCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCAGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR GCA 90 bp TTGTTTTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAAGGTGGTGGGGCTTCTaGTTCGGCGGGGTCATACCA +
Preference number: 4 (lower is better)
Translates to: LFLFCLAQILMGISNLERRWWGF*FGGVIP
Trigger: TGGTATGACCCCGCCGAAGCAGAAGCCCCACCACCT...TCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR GCA 90 bp ATCTCTAGTGAGCATTTTGTAAAATTCCACTCCAACGTTAGGCCATGGATGCAGGAGAAGGAGTGGCGTTaGTACTTACTGCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: ISSEHFVKFHSNVRPWMQEKEWR*YLLLHL
Trigger: CAGATGCAGCAGTAAGTAGCAACGCCACTCCTTCTC...CTGCATCCATGGCCTAACGTTGGAGTGGAATTTTACAAAATGCTCACTAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp ATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGAGAAGGAGTGGCGTTaGTACTTACTGCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: ILSSKQAILSGLSRARHCEKEWR*YLLLHL
Trigger: CAGATGCAGCAGTAAGTAGCAACGCCACTCCTTCTC...ACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TCAGACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGTCGAGGCATCAAGACTaGTGTCTGTGTCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SDIFCLILSSKQAILSGLSRHQD*CLCLRP
Trigger: TGGCCTCAGACACAGACAGCAGTCTTGATGCCTCGA...CAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp ATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTACGTTAGGCCATGGATaGAGGAACCTATCTGCCATC +
Preference number: 4 (lower is better)
Translates to: ILSSKQAILSGLSRARHCTLGHG*RNLSAI
Trigger: GATGGCAGATAGGTTCCTGCATCCATGGCCTAACGT...ACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp GACAGTTTAAAGAAAACAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATGGGAGCATCACACAGTaGAGGGCAGCTCGCGCATTT +
Preference number: 4 (lower is better)
Translates to: DSLKKTRCPHKCLGFSRDGSITQ*RAARAF
Trigger: AAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCC...ATCACGGCTAAAACCAAGACACTTATGTGGACATCTTGTTTTCTTTAAACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp CAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATAATTCTCAGCCCCAAATCACAGAACTCTGTCTaGTCTCTGGACTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: QDVHISVLVLAVIILSPKSQNSV*SLDSAL
Trigger: AAGGGCAGAGTCCAGAGAGCAGACAGAGTTCTGTGA...TTTGGGGCTGAGAATTATCACGGCTAAAACCAAGACACTTATGTGGACATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp ATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTTCCAGACTGCTCTCCTaGTCTCACAGAACTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ILSSKQAILSGLSRARHCSRLLS*SHRTLS
Trigger: AGACAGAGTTCTGTGAGAGCAGGAGAGCAGTCTGGA...ACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAGATCAATATGGTCAGTaGCTTGGAATATCACACAAC +
Preference number: 4 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTDQYGQ*LGISHN
Trigger: GTTGTGTGATATTCCAAGGCACTGACCATATTGATC...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393360.7
ENST00000452135.7
CDS-3UTR CCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTCAATATCCCGAAGGGTaGGCAAGTTTCAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSQYPEG*ASFRSL
Trigger: GAGGGATCTGAAACTTGCCCACCCTTCGGGATATTG...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393362.8
CDS-3UTR TCA 90 bp CGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAGACGGCTTAGTTTCTTaGCTGCAACATTTATCCCAA +
Preference number: 4 (lower is better)
Translates to: RPLKSFPEHSCEKECLPTDGLVS*LQHLSQ
Trigger: TTGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTC...TGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp ATCTCTAGTGAGCATTTTGTAAAATTCCACTCCAACGTTAGGCCATGGATGCAGGTCTCGCTCAGATTCTaGTGGGAATATCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: ISSEHFVKFHSNVRPWMQVSLRF*WEYPIW
Trigger: CCAGATTGGATATTCCCATCAGAATCTGAGCGAGAC...CTGCATCCATGGCCTAACGTTGGAGTGGAATTTTACAAAATGCTCACTAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTGTCTCGCTCAGATTCTaGTGGGAATATCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSVSLRF*WEYPIW
Trigger: CCAGATTGGATATTCCCATCAGAATCTGAGCGAGAC...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp TCAGACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGACAGTGATGTATGGGTaGCGCAGAGCTTCGTCTACA +
Preference number: 4 (lower is better)
Translates to: SDIFCLILSSKQAILSGLTVMYG*RRASST
Trigger: TGTAGACGAAGCTCTGCGTCACCCATACATCACTGT...CAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp AACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTACAATCATCCCAGACAAGAACTGCTGTCTGTGTCTaGGGCCAGCGTCTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: NLKLYRAVKLNVQSSQTRTAVCV*GQRLLS
Trigger: ACTGAGCAGACGCTGGCCTCAGACACAGACAGCAGT...TCTTGTCTGGGATGATTGTACATTCAGCTTTACTGCACGATACAATTTTAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCAGACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAATCAGCCTGGCCTCTaGAAACAGACCAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SDIFCLILSSKQAILSGLNQPGL*KQTKEE
Trigger: CTCCTCTTTGGTCTGTTTTCAGAGGCCAGGCTGATT...CAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp CAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATAATTCTCAGCCCCAAACCCAGAACATTCTTGTaGAAAGGAATGCCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: QDVHISVLVLAVIILSPKPRTFL*KGMPPN
Trigger: GTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGG...TTTGGGGCTGAGAATTATCACGGCTAAAACCAAGACACTTATGTGGACATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCAGACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGGCTCCGTTCCTGCAGTaGCACTTAACATACTCAGCA +
Preference number: 4 (lower is better)
Translates to: SDIFCLILSSKQAILSGLAPFLQ*HLTYSA
Trigger: TGCTGAGTATGTTAAGTGTCACTGCAGGAACGGAGC...CAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCAAGCAGCACTAAGCAAAACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTAACCCTGAAGCTGGGGTaGGGTATTTCTGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SSSTKQNLKLYRAVKLNVTLKLG*GISVEP
Trigger: GGGCTCCACAGAAATACCTCACCCCAGCTTCAGGGT...TACATTCAGCTTTACTGCACGATACAATTTTAAGTTTTGCTTAGTGCTGCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAGGCAAGGCACTGCAATaGTGGCGCCAAACAATCCCT +
Preference number: 4 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGGKALQ*WRQTIP
Trigger: AGGGATTGTTTGGCGCCATCATTGCAGTGCCTTGCC...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTGACACACAGTTGAAGTaGGACACCAAGGAAGAGATG +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSDTQLK*DTKEEM
Trigger: CATCTCTTCCTTGGTGTCTCACTTCAACTGTGTGTC...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTCATGATGCAACCCACTaGCCAGATATCAACGTTCTC +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSHDATH*PDINVL
Trigger: GAGAACGTTGATATCTGGTCAGTGGGTTGCATCATG...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR GCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGACATGATGCAGCGTCCTaGAATATCCCGAAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGHDAAS*NIPKGG
Trigger: CCCACCCTTCGGGATATTGCAGGACGCTGCATCATG...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393362.8
CDS-3UTR GCA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGTTCACCTACTCTAACTaGTCACCTGAAATGATCTTG +
Preference number: 4 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMFTYSN*SPEMIL
Trigger: CAAGATCATTTCAGGTGAGCAGTTAGAGTAGGTGAA...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TCAGACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGACGTTAGGCCATGGATaGAGGAACCTATCTGCCATC +
Preference number: 4 (lower is better)
Translates to: SDIFCLILSSKQAILSGLTLGHG*RNLSAI
Trigger: GATGGCAGATAGGTTCCTGCATCCATGGCCTAACGT...CAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp CATTTTGTAAAATTCCACTCCAACGTTAGGCCATGGATGCAGGAACCTATCTGCTCTTGTGAAAAGGAATaGCTCCCAACAATGGAGAGC +
Preference number: 4 (lower is better)
Translates to: HFVKFHSNVRPWMQEPICSCEKE*LPTMES
Trigger: GCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGA...GCAGATAGGTTCCTGCATCCATGGCCTAACGTTGGAGTGGAATTTTACAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACGATTCCAGGATACTTTaGTCTGTTTTCGACATAATT +
Preference number: 4 (lower is better)
Translates to: INSQAFQAHGGESSFNADDSRIL*SVFDII
Trigger: AATTATGTCGAAAACAGACCAAAGTATCCTGGAATC...GTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTCCAAACAGTGATGTATaGGTGACGCAGAGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: DIFCLILSSKQAILSGLSPNSDV*VTQSFV
Trigger: GACGAAGCTCTGCGTCACCCATACATCACTGTTTGG...ACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTCCAGCGTCTGCTCAGTaGACATGGATGAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: ILSSKQAILSGLSRARHCPASAQ*TWMKCH
Trigger: ATGACATTTCATCCATGTCCACTGAGCAGACGCTGG...ACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGCCAAGCAAGCATTTGTaGTCACATGCACATACATCT +
Preference number: 4 (lower is better)
Translates to: LSGLSRARHCVSYMQNMEPSKHL*SHAHTS
Trigger: AGATGTATGTGCATGTGACCACAAATGCTTGCTTGG...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAAGAAAATCAAGAACGTaGTATTGGCCGAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: RPLKSFPEHSCEKECLPTRKSRT*YWPRES
Trigger: ACTTTCCCTCGGCCAATACCACGTTCTTGATTTTCT...TGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp TTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAATGGAGAGCAACAATTTGAAACCATTTGCGTaGCACCAAGACCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: FPEHSCEKECLPTMESNNLKPFA*HQDPGK
Trigger: TTTGCCAGGGTCTTGGTGCCACGCAAATGGTTTCAA...ATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGACGCCAAACAATCCCTTaGGCCCCAGAGCCAATTGGT +
Preference number: 4 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGRQTIP*APEPIG
Trigger: ACCAATTGGCTCTGGGGCCCAAGGGATTGTTTGGCG...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR CCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTCATCCTGCCAATGAATaGCAAGGCACTGCAATGATG +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSHPANE*QGTAMM
Trigger: CATCATTGCAGTGCCTTGCCATTCATTGGCAGGATG...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR CCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTCACAGCATCCCTTCCTaGTTAATCCATGGAGTGACA +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSHSIPS*LIHGVT
Trigger: TGTCACTCCATGGATTAACCAGGAAGGGATGCTGTG...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR CCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAACACCAAGGAAGAGATaGCCAGCCCAACCCCTCACA +
Preference number: 4 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGTPRKR*PAQPLT
Trigger: TGTGAGGGGTTGGGCTGGCCATCTCTTCCTTGGTGT...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR CCA 90 bp TTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTACACCAAGGAAGAGATaGCCAGCCCAACCCCTCACA +
Preference number: 4 (lower is better)
Translates to: FILSRSDSDGNIQSGKSSTPRKR*PAQPLT
Trigger: TGTGAGGGGTTGGGCTGGCCATCTCTTCCTTGGTGT...AGAACTCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR CCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTACGATTCTGACGTTCTaGGCTGGACACACAGTTGAA +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSTILTF*AGHTVE
Trigger: TTCAACTGTGTGTCCAGCCCAGAACGTCAGAATCGT...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
3UTR CAA 72 bp TTCCAAAGTGCTAGATGGGCAAGTCCAAGCAAGCATTaGTGGTCACATGCACATACATCTCAACAGTTACAG +
Preference number: 4 (lower is better)
Translates to: FQSARWASPSKH*WSHAHTSQQLQ
Trigger: CTGTAACTGTTGAGATGTATGTGCATGTGACCACAAATGCTTGCTTGGACTTGCCCATCTAGCACTTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTATTTACTGTCGCTCATaGTGCAGCGTCCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSIYCRS*CSVLQY
Trigger: ATATTGCAGGACGCTGCATCATGAGCGACAGTAAAT...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGGGCTTCAAATCTCTATaGATTATACCAGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: LSGLSRARHCVSYMQNMEGFKSL*IIPAEC
Trigger: GCATTCAGCTGGTATAATTCATAGAGATTTGAAGCC...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTCTTCAGGGTGCAGTCTaGTTTCACAACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSLQGAV*FHNNVA
Trigger: AGCAACATTGTTGTGAAATCAGACTGCACCCTGAAG...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGACTTCATGAACTCTGCTaGTGGTGTTCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGLHELC*WCSQLL
Trigger: GAGCAGCTGGGAACACCATCAGCAGAGTTCATGAAG...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp TCAGACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGGTCTCGCTCAGATTCTaGTGGGAATATCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: SDIFCLILSSKQAILSGLVSLRF*WEYPIW
Trigger: CCAGATTGGATATTCCCATCAGAATCTGAGCGAGAC...CAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCAGACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGTTGATCGATGAAGACTaGGAAGGAGTGGCGTTGCTA +
Preference number: 4 (lower is better)
Translates to: SDIFCLILSSKQAILSGLLIDED*EGVALL
Trigger: TAGCAACGCCACTCCTTCTCAGTCTTCATCGATCAA...CAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTGGATGAAATGTCATTaGTCGATGAAGACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SSKQAILSGLSRARHCVSWMKCH*SMKTEK
Trigger: CTTCTCAGTCTTCATCGATCAATGACATTTCATCCA...AGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAATGGAGAGCAACAATTTCCTTCACGTCCTCTaGAGAGTTTCCCAGAACATT +
Preference number: 4 (lower is better)
Translates to: FPEHSCEKECLPTMESNNFLHVL*RVSQNI
Trigger: AATGTTCTGGGAAACTCTTCAGAGGACGTGAAGGAA...ATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAGGCTGGACACACAGTTaGAGTGAGACACCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGGWTHS*SETPRK
Trigger: CTTCCTTGGTGTCTCACTTCAACTGTGTGTCCAGCC...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp TTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTGGCTGGACACACAGTTaGAGTGAGACACCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FILSRSDSDGNIQSGKSSGWTHS*SETPRK
Trigger: CTTCCTTGGTGTCTCACTTCAACTGTGTGTCCAGCC...AGAACTCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR GCA 90 bp TCAAGCAGCACTAAGCAAAACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTACATGATGCAGCGTCCTaGAATATCCCGAAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSSTKQNLKLYRAVKLNVHDAAS*NIPKGG
Trigger: CCCACCCTTCGGGATATTGCAGGACGCTGCATCATG...TACATTCAGCTTTACTGCACGATACAATTTTAAGTTTTGCTTAGTGCTGCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAATGGAGAGCAACAATTCTTGTGAAAAGGAATaGCTCCCAACAATGGAGAGC +
Preference number: 4 (lower is better)
Translates to: FPEHSCEKECLPTMESNNSCEKE*LPTMES
Trigger: GCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGA...ATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CTTTCACTTAGGTCCTTTGTAATGTGCTTCAGTTCTTACTTTGGGGGAAAATATGCACAAACAATCCCTTaGGCCCCAGAGCCAATTGGT +
Preference number: 4 (lower is better)
Translates to: LSLRSFVMCFSSYFGGKYAQTIP*APEPIG
Trigger: ACCAATTGGCTCTGGGGCCCAAGGGATTGTTTGTGC...ATATTTTCCCCCAAAGTAAGAACTGAAGCACATTACAAAGGACCTAAGTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR CCA 90 bp GACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTGGGAACAGGACTTTATaGAGGACCATTTCTGCCATG +
Preference number: 4 (lower is better)
Translates to: DIFCLILSSKQAILSGLSGNRTL*RTISAM
Trigger: CATGGCAGAAATGGTCCTCCATAAAGTCCTGTTCCC...ACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343111.10
ENST00000455781.5
CDS-3UTR CCA 90 bp ACAGAGATCCGCTTGTCAGGATCAATCACTAACATTTTTGATAACAGATCTCTGCCAAACAGTGATGTATaGGTGACGCAGAGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: TEIRLSGSITNIFDNRSLPNSDV*VTQSFV
Trigger: GACGAAGCTCTGCGTCACCCATACATCACTGTTTGG...CAGAGATCTGTTATCAAAAATGTTAGTGATTGATCCTGACAAGCGGATCTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR CCA 90 bp TCAGACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAAGACTGAGAAGGAGTaGCGTTGCTACTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: SDIFCLILSSKQAILSGLKTEKE*RCYLLL
Trigger: CAGCAGTAAGTAGCAACGCCACTCCTTCTCAGTCTT...CAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CATTTTGTAAAATTCCACTCCAACGTTAGGCCATGGATGCAGGAACCTATCTGCAATGCCTCCCAACAATaGAGAGCAACAATAGCAACA +
Preference number: 4 (lower is better)
Translates to: HFVKFHSNVRPWMQEPICNASQQ*RATIAT
Trigger: TGTTGCTATTGTTGCTCTCCATTGTTGGGAGGCATT...GCAGATAGGTTCCTGCATCCATGGCCTAACGTTGGAGTGGAATTTTACAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGTTGATAACAGATCTCTaGCTTGACTTGCGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LSGLSRARHCVSYMQNMELITDL*LDLRSL
Trigger: AAGAGAACGCAAGTCAAGCCAGAGATCTGTTATCAA...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347470.8
CDS-3UTR CCA 90 bp TCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACACCAATACTCTGAATTaGACCTGCATATTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SKQAILSGLSRARHCVSYTNTLN*TCILVK
Trigger: CTTCACCAATATGCAGGTCCAATTCAGAGTATTGGT...GTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452135.7
3UTR CAA 72 bp TGTGTTTCTTACATGCAGAACATGGAGTTTTTCTATTaGGTTCCATCAACTCCCAAGCATTTCAGGCCCACG +
Preference number: 4 (lower is better)
Translates to: CVSYMQNMEFFY*VPSTPKHFRPT
Trigger: CGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAACTCCATGTTCTGCATGTAAGAAACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTGCTGCATCTGAAGGCTaGTCTTTTACAACACCATTC +
Preference number: 4 (lower is better)
Translates to: DIFCLILSSKQAILSGLSAASEG*SFTTPF
Trigger: GAATGGTGTTGTAAAAGATCAGCCTTCAGATGCAGC...ACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347470.8
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACAAGAACTGTATCAAATaGAGCACAAACAATCCCTTG +
Preference number: 4 (lower is better)
Translates to: SKQAILSGLSRARHCVSYKNCIK*STNNPL
Trigger: CAAGGGATTGTTTGTGCTGCATTTGATACAGTTCTT...GTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACTTACAACACCATTCTTaGTTCTTTCTTCCCAATCCA +
Preference number: 4 (lower is better)
Translates to: SKQAILSGLSRARHCVSYLQHHS*FFLPNP
Trigger: TGGATTGGGAAGAAAGAAGCAAGAATGGTGTTGTAA...GTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTTACAACACCATTCTTaGTTCTTTCTTCCCAATCCA +
Preference number: 4 (lower is better)
Translates to: SSKQAILSGLSRARHCVSLQHHS*FFLPNP
Trigger: TGGATTGGGAAGAAAGAAGCAAGAATGGTGTTGTAA...AGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp ACTCTGAATTGGACCTGCATATTGGTGAAGTCAAAACTTACTGCCATTAGTTTTACGTTAGGCCATGGATaGAGGAACCTATCTGCCATC +
Preference number: 4 (lower is better)
Translates to: TLNWTCILVKSKLTAISFTLGHG*RNLSAI
Trigger: GATGGCAGATAGGTTCCTGCATCCATGGCCTAACGT...AAAACTAATGGCAGTAAGTTTTGACTTCACCAATATGCAGGTCCAATTCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452135.7
CDS-3UTR GCA 90 bp GACAGTTTAAAGAAAACAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATTCACAGAACTCTGTCTaGTCTCTGGACTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: DSLKKTRCPHKCLGFSRDSQNSV*SLDSAL
Trigger: AAGGGCAGAGTCCAGAGAGCAGACAGAGTTCTGTGA...ATCACGGCTAAAACCAAGACACTTATGTGGACATCTTGTTTTCTTTAAACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CTTTCACTTAGGTCCTTTGTAATGTGCTTCAGTTCTTACTTTGGGGGAAAATATCAATATCCCGAAGGGTaGGCAAGTTTCAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: LSLRSFVMCFSSYFGGKYQYPEG*ASFRSL
Trigger: GAGGGATCTGAAACTTGCCCACCCTTCGGGATATTG...ATATTTTCCCCCAAAGTAAGAACTGAAGCACATTACAAAGGACCTAAGTGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425491.6
CDS-3UTR CCA 90 bp TCAAGCAGCACTAAGCAAAACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTAGCACAAACAATCCCTTaGGCCCCAGAGCCAATTGGT +
Preference number: 4 (lower is better)
Translates to: SSSTKQNLKLYRAVKLNVAQTIP*APEPIG
Trigger: ACCAATTGGCTCTGGGGCCCAAGGGATTGTTTGTGC...TACATTCAGCTTTACTGCACGATACAATTTTAAGTTTTGCTTAGTGCTGCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ATCTCTAGTGAGCATTTTGTAAAATTCCACTCCAACGTTAGGCCATGGATGCAGCCAAGCAAGCATTTGTaGTCACATGCACATACATCT +
Preference number: 4 (lower is better)
Translates to: ISSEHFVKFHSNVRPWMQPSKHL*SHAHTS
Trigger: AGATGTATGTGCATGTGACCACAAATGCTTGCTTGG...CTGCATCCATGGCCTAACGTTGGAGTGGAATTTTACAAAATGCTCACTAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ATCTCTAGTGAGCATTTTGTAAAATTCCACTCCAACGTTAGGCCATGGATGCAGAATGCCTCCCAACAATaGAGAGCAACAATAGCAACA +
Preference number: 4 (lower is better)
Translates to: ISSEHFVKFHSNVRPWMQNASQQ*RATIAT
Trigger: TGTTGCTATTGTTGCTCTCCATTGTTGGGAGGCATT...CTGCATCCATGGCCTAACGTTGGAGTGGAATTTTACAAAATGCTCACTAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp AACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTACAATCATCCCAGACAAGACTACCTGGTGGAAGATaGCCTTTCCAGGAAACCCTC +
Preference number: 4 (lower is better)
Translates to: NLKLYRAVKLNVQSSQTRLPGGR*PFQETL
Trigger: GAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAG...TCTTGTCTGGGATGATTGTACATTCAGCTTTACTGCACGATACAATTTTAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp AACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTACAATCATCCCAGACAAGACTTGAAACTGAGACCTaGACATGGGGGAGACAGTCG +
Preference number: 4 (lower is better)
Translates to: NLKLYRAVKLNVQSSQTRLETET*TWGRQS
Trigger: CGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAG...TCTTGTCTGGGATGATTGTACATTCAGCTTTACTGCACGATACAATTTTAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTTTCCTGGTTAATCCATaGAGTGACAATGACACTGAC +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSFLVNP*SDNDTD
Trigger: GTCAGTGTCATTGTCACTCCATGGATTAACCAGGAA...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp ACAGAGATCCGCTTGTCAGGATCAATCACTAACATTTTTGATAACAGATCTCTGAACGTTTTAGGACAGTaGAGGTTGAGTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: TEIRLSGSITNIFDNRSLNVLGQ*RLSLPL
Trigger: AAGTGGCAGACTCAACCTTCACTGTCCTAAAACGTT...CAGAGATCTGTTATCAAAAATGTTAGTGATTGATCCTGACAAGCGGATCTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR TCA 90 bp CAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATAATTCTCAGCCCCAAAGGCTTCAAATCTCTATaGATTATACCAGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: QDVHISVLVLAVIILSPKGFKSL*IIPAEC
Trigger: GCATTCAGCTGGTATAATTCATAGAGATTTGAAGCC...TTTGGGGCTGAGAATTATCACGGCTAAAACCAAGACACTTATGTGGACATCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TTGTTTTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAACAGTGATGTATGGGTaGCGCAGAGCTTCGTCTACA +
Preference number: 4 (lower is better)
Translates to: LFLFCLAQILMGISNLERTVMYG*RRASST
Trigger: TGTAGACGAAGCTCTGCGTCACCCATACATCACTGT...TCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR TCA 90 bp TTGTTTTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGGTCATACCAAACAGTaGTGTATGGGTGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: LFLFCLAQILMGISNLERGHTKQ*CMGDAE
Trigger: CTCTGCGTCACCCATACATCACTGTTTGGTATGACC...TCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR TCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAGACACACAGTTGAAGTaGGACACCAAGGAAGAGATG +
Preference number: 4 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGDTQLK*DTKEEM
Trigger: CATCTCTTCCTTGGTGTCTCACTTCAACTGTGTGTC...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp CTTTCACTTAGGTCCTTTGTAATGTGCTTCAGTTCTTACTTTGGGGGAAAATATCATGATGCAACCCACTaGCCAGATATCAACGTTCTC +
Preference number: 4 (lower is better)
Translates to: LSLRSFVMCFSSYFGGKYHDATH*PDINVL
Trigger: GAGAACGTTGATATCTGGTCAGTGGGTTGCATCATG...ATATTTTCCCCCAAAGTAAGAACTGAAGCACATTACAAAGGACCTAAGTGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425491.6
CDS-3UTR GCA 90 bp ATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTTTCACCTACTCTAACTaGTCACCTGAAATGATCTTG +
Preference number: 4 (lower is better)
Translates to: ILSSKQAILSGLSRARHCFTYSN*SPEMIL
Trigger: CAAGATCATTTCAGGTGAGCAGTTAGAGTAGGTGAA...ACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGACTGACCGTCTTACCATaGAAGAGACTAACGTTCAGG +
Preference number: 4 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGLTVLP*KRLTFR
Trigger: CCTGAACGTTAGTCTCTTGCATGGTAAGACGGTCAG...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR GCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTGATCAATATGGTCAGTaGCTTGGAATATCACACAAC +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSDQYGQ*LGISHN
Trigger: GTTGTGTGATATTCCAAGGCACTGACCATATTGATC...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR GCA 90 bp TCTCTTTCACTTAGGTCCTTTGTAATGTGCTTCAGTTCTTACTTTGGGGGAAAAGAAGGATACGGTCAGTaGCTTGGAATATCACACAAC +
Preference number: 4 (lower is better)
Translates to: SLSLRSFVMCFSSYFGGKEGYGQ*LGISHN
Trigger: GTTGTGTGATATTCCAAGGCACTGACCGTATCCTTC...TTTTCCCCCAAAGTAAGAACTGAAGCACATTACAAAGGACCTAAGTGAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR CCA 90 bp TCAAGCAGCACTAAGCAAAACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTACAATATCCCGAAGGGTaGGCAAGTTTCAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: SSSTKQNLKLYRAVKLNVQYPEG*ASFRSL
Trigger: GAGGGATCTGAAACTTGCCCACCCTTCGGGATATTG...TACATTCAGCTTTACTGCACGATACAATTTTAAGTTTTGCTTAGTGCTGCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp TCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACGATTCCAGGATACTTTaGTCTGTTTTCGACATAATT +
Preference number: 4 (lower is better)
Translates to: SKQAILSGLSRARHCVSYDSRIL*SVFDII
Trigger: AATTATGTCGAAAACAGACCAAAGTATCCTGGAATC...GTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGGATTCCAGGATACTTTaGTCTGTTTTCGACATAATT +
Preference number: 4 (lower is better)
Translates to: LSGLSRARHCVSYMQNMEDSRIL*SVFDII
Trigger: AATTATGTCGAAAACAGACCAAAGTATCCTGGAATC...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAATGCCTCCCAACAATaGAGAGCAACAATAGCAACA +
Preference number: 4 (lower is better)
Translates to: DIFCLILSSKQAILSGLSNASQQ*RATIAT
Trigger: TGTTGCTATTGTTGCTCTCCATTGTTGGGAGGCATT...ACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp TTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTCATCCTGCCAATGAATaGCAAGGCACTGCAATGATG +
Preference number: 4 (lower is better)
Translates to: FILSRSDSDGNIQSGKSSHPANE*QGTAMM
Trigger: CATCATTGCAGTGCCTTGCCATTCATTGGCAGGATG...AGAACTCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR CCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAACGATTCTGACGTTCTaGGCTGGACACACAGTTGAA +
Preference number: 4 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGTILTF*AGHTVE
Trigger: TTCAACTGTGTGTCCAGCCCAGAACGTCAGAATCGT...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR CCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTATATGGTCAGTGCCTTaGAATATCACACAACCTTTC +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSIWSVP*NITQPF
Trigger: GAAAGGTTGTGTGATATTCCAAGGCACTGACCATAT...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp GACAGTTTAAAGAAAACAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATATTTACTGTCGCTCATaGTGCAGCGTCCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: DSLKKTRCPHKCLGFSRDIYCRS*CSVLQY
Trigger: ATATTGCAGGACGCTGCATCATGAGCGACAGTAAAT...ATCACGGCTAAAACCAAGACACTTATGTGGACATCTTGTTTTCTTTAAACTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAATTTACTGTCGCTCATaGTGCAGCGTCCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGIYCRS*CSVLQY
Trigger: ATATTGCAGGACGCTGCATCATGAGCGACAGTAAAT...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAAACGTTTTAGGACAGTaGAGGTTGAGTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGNVLGQ*RLSLPL
Trigger: AAGTGGCAGACTCAACCTTCACTGTCCTAAAACGTT...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp ACAGAGATCCGCTTGTCAGGATCAATCACTAACATTTTTGATAACAGATCTCTGGACGGCTTAGTTTCTTaGCTGCAACATTTATCCCAA +
Preference number: 4 (lower is better)
Translates to: TEIRLSGSITNIFDNRSLDGLVS*LQHLSQ
Trigger: TTGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTC...CAGAGATCTGTTATCAAAAATGTTAGTGATTGATCCTGACAAGCGGATCTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR TCA 90 bp TCTCTTTCACTTAGGTCCTTTGTAATGTGCTTCAGTTCTTACTTTGGGGGAAAAGACGGCTTAGTTTCTTaGCTGCAACATTTATCCCAA +
Preference number: 4 (lower is better)
Translates to: SLSLRSFVMCFSSYFGGKDGLVS*LQHLSQ
Trigger: TTGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTC...TTTTCCCCCAAAGTAAGAACTGAAGCACATTACAAAGGACCTAAGTGAAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR TCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAGCTGAAGTTTCTTCATaGACTCTGCTGATGGTGTTC +
Preference number: 4 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGAEVSS*TLLMVF
Trigger: GAACACCATCAGCAGAGTTCATGAAGAAACTTCAGC...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp TCAAGCAGCACTAAGCAAAACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTAGTCTCGCTCAGATTCTaGTGGGAATATCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: SSSTKQNLKLYRAVKLNVVSLRF*WEYPIW
Trigger: CCAGATTGGATATTCCCATCAGAATCTGAGCGAGAC...TACATTCAGCTTTACTGCACGATACAATTTTAAGTTTTGCTTAGTGCTGCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TTGTTTTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGTCTCGCTCAGATTCTaGTGGGAATATCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: LFLFCLAQILMGISNLERVSLRF*WEYPIW
Trigger: CCAGATTGGATATTCCCATCAGAATCTGAGCGAGAC...TCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR TCA 90 bp GACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTTGGATGAAATGTCATTaGTCGATGAAGACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: DIFCLILSSKQAILSGLSWMKCH*SMKTEK
Trigger: CTTCTCAGTCTTCATCGATCAATGACATTTCATCCA...ACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTATAACTTTATTCCACTaGTCAATATGGTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSITLFH*SIWSVP
Trigger: AGGCACTGACCATATTGATCAGTGGAATAAAGTTAT...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR GCA 90 bp CAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATAATTCTCAGCCCCAAATTACAACACCATTCTTaGTTCTTTCTTCCCAATCCA +
Preference number: 4 (lower is better)
Translates to: QDVHISVLVLAVIILSPKLQHHS*FFLPNP
Trigger: TGGATTGGGAAGAAAGAAGCAAGAATGGTGTTGTAA...TTTGGGGCTGAGAATTATCACGGCTAAAACCAAGACACTTATGTGGACATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR GCA 90 bp TTGTTTTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGACTGACCGTCTTACCATaGAAGAGACTAACGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LFLFCLAQILMGISNLERLTVLP*KRLTFR
Trigger: CCTGAACGTTAGTCTCTTGCATGGTAAGACGGTCAG...TCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR CCA 90 bp GACAGTTTAAAGAAAACAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATAGACAGACTCGTACGTaGTTATCGCTACTTACACAG +
Preference number: 4 (lower is better)
Translates to: DSLKKTRCPHKCLGFSRDRQTRT*LSLLTQ
Trigger: CTGTGTAAGTAGCGATAACCACGTACGAGTCTGTCT...ATCACGGCTAAAACCAAGACACTTATGTGGACATCTTGTTTTCTTTAAACTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp ACAGAGATCCGCTTGTCAGGATCAATCACTAACATTTTTGATAACAGATCTCTGTTCCTGGTTAATCCATaGAGTGACAATGACACTGAC +
Preference number: 4 (lower is better)
Translates to: TEIRLSGSITNIFDNRSLFLVNP*SDNDTD
Trigger: GTCAGTGTCATTGTCACTCCATGGATTAACCAGGAA...CAGAGATCTGTTATCAAAAATGTTAGTGATTGATCCTGACAAGCGGATCTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR CCA 90 bp TCAAGCAGCACTAAGCAAAACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTAACTGGTGAATTCTCCTaGCCACGCCTCATGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SSSTKQNLKLYRAVKLNVTGEFS*PRLMRK
Trigger: TTTTCTCATGAGGCGTGGCCAGGAGAATTCACCAGT...TACATTCAGCTTTACTGCACGATACAATTTTAAGTTTTGCTTAGTGCTGCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452135.7
3UTR CAA 72 bp CGCCTCATGAGAAAACAATTACACCAATACTCTGAATaGGACCTGCATATTGGTGAAGTCAAAACTTACTGC +
Preference number: 4 (lower is better)
Translates to: RLMRKQLHQYSE*DLHIGEVKTYC
Trigger: GCAGTAAGTTTTGACTTCACCAATATGCAGGTCCAATTCAGAGTATTGGTGTAATTGTTTTCTCATGAGGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452135.7
CDS-3UTR TCA 90 bp AACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTACAATCATCCCAGACAAGAAACGTTTTAGGACAGTaGAGGTTGAGTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: NLKLYRAVKLNVQSSQTRNVLGQ*RLSLPL
Trigger: AAGTGGCAGACTCAACCTTCACTGTCCTAAAACGTT...TCTTGTCTGGGATGATTGTACATTCAGCTTTACTGCACGATACAATTTTAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAGACGGCTTAGTTTCTTaGCTGCAACATTTATCCCAA +
Preference number: 4 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGDGLVS*LQHLSQ
Trigger: TTGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTC...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR TCA 90 bp TCTCTTTCACTTAGGTCCTTTGTAATGTGCTTCAGTTCTTACTTTGGGGGAAAAGGCTTCAAATCTCTATaGATTATACCAGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: SLSLRSFVMCFSSYFGGKGFKSL*IIPAEC
Trigger: GCATTCAGCTGGTATAATTCATAGAGATTTGAAGCC...TTTTCCCCCAAAGTAAGAACTGAAGCACATTACAAAGGACCTAAGTGAAAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR TCA 90 bp CTTTCACTTAGGTCCTTTGTAATGTGCTTCAGTTCTTACTTTGGGGGAAAATATGCTGTATCTCTAACATaGCTTGCTGACTACAGTATG +
Preference number: 4 (lower is better)
Translates to: LSLRSFVMCFSSYFGGKYAVSLT*LADYSM
Trigger: CATACTGTAGTCAGCAAGTCATGTTAGAGATACAGC...ATATTTTCCCCCAAAGTAAGAACTGAAGCACATTACAAAGGACCTAAGTGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR TCA 90 bp GACAGTTTAAAGAAAACAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATTTCTGCCTCTCAGTGTaGAACCTCTTGCTAATATTG +
Preference number: 4 (lower is better)
Translates to: DSLKKTRCPHKCLGFSRDFCLSV*NLLLIL
Trigger: CAATATTAGCAAGAGGTTTCACACTGAGAGGCAGAA...ATCACGGCTAAAACCAAGACACTTATGTGGACATCTTGTTTTCTTTAAACTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452135.7
CDS-3UTR GCA 90 bp TCAGACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAAGAACTGTATCAAATaGAGCACAAACAATCCCTTG +
Preference number: 4 (lower is better)
Translates to: SDIFCLILSSKQAILSGLKNCIK*STNNPL
Trigger: CAAGGGATTGTTTGTGCTGCATTTGATACAGTTCTT...CAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTGATTCCAGGATACTTTaGTCTGTTTTCGACATAATT +
Preference number: 4 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSDSRIL*SVFDII
Trigger: AATTATGTCGAAAACAGACCAAAGTATCCTGGAATC...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR CCA 90 bp GACAGTTTAAAGAAAACAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATCCAAGCAAGCATTTGTaGTCACATGCACATACATCT +
Preference number: 4 (lower is better)
Translates to: DSLKKTRCPHKCLGFSRDPSKHL*SHAHTS
Trigger: AGATGTATGTGCATGTGACCACAAATGCTTGCTTGG...ATCACGGCTAAAACCAAGACACTTATGTGGACATCTTGTTTTCTTTAAACTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp TCAGACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGAAGCAGCACTACCTaGAAGATTATTTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: SDIFCLILSSKQAILSGLRSSTT*KIIWHL
Trigger: TAAATGCCAAATAATCTTCCAGGTAGTGCTGCTTCT...CAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CCA 90 bp GACAGTTTAAAGAAAACAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATAGAAAATCAAGAACGTaGTATTGGCCGAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: DSLKKTRCPHKCLGFSRDRKSRT*YWPRES
Trigger: ACTTTCCCTCGGCCAATACCACGTTCTTGATTTTCT...ATCACGGCTAAAACCAAGACACTTATGTGGACATCTTGTTTTCTTTAAACTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp GACAGTTTAAAGAAAACAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATGGCTTCAAATCTCTATaGATTATACCAGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: DSLKKTRCPHKCLGFSRDGFKSL*IIPAEC
Trigger: GCATTCAGCTGGTATAATTCATAGAGATTTGAAGCC...ATCACGGCTAAAACCAAGACACTTATGTGGACATCTTGTTTTCTTTAAACTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TCTCTTTCACTTAGGTCCTTTGTAATGTGCTTCAGTTCTTACTTTGGGGGAAAATCTAACATGACTTGCTaGCTACAGTATGAGTTTATC +
Preference number: 4 (lower is better)
Translates to: SLSLRSFVMCFSSYFGGKSNMTC*LQYEFI
Trigger: GATAAACTCATACTGTAGTCAGCAAGTCATGTTAGA...TTTTCCCCCAAAGTAAGAACTGAAGCACATTACAAAGGACCTAAGTGAAAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR CCA 90 bp TCAAGCAGCACTAAGCAAAACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTACAGTCGTTTCCTTCTTaGCTGGAAACTAAGTCAACA +
Preference number: 4 (lower is better)
Translates to: SSSTKQNLKLYRAVKLNVQSFPS*LETKST
Trigger: TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTG...TACATTCAGCTTTACTGCACGATACAATTTTAAGTTTTGCTTAGTGCTGCTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TTGTTTTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGGCTTCAAATCTCTATaGATTATACCAGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: LFLFCLAQILMGISNLERGFKSL*IIPAEC
Trigger: GCATTCAGCTGGTATAATTCATAGAGATTTGAAGCC...TCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAAAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR GCA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGATTACAACACCATTCTTaGTTCTTTCTTCCCAATCCA +
Preference number: 4 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGLQHHS*FFLPNP
Trigger: TGGATTGGGAAGAAAGAAGCAAGAATGGTGTTGTAA...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR CCA 90 bp GACAGTTTAAAGAAAACAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATCCAATAAGATATAACTaGTGCAGAGAGAGCCATATA +
Preference number: 4 (lower is better)
Translates to: DSLKKTRCPHKCLGFSRDPIRYN*CRESHI
Trigger: TATATGGCTCTCTCTGCACCAGTTATATCTTATTGG...ATCACGGCTAAAACCAAGACACTTATGTGGACATCTTGTTTTCTTTAAACTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR TCA 90 bp TTGTTTTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAATAACTTTATTCCACTaGTCAATATGGTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: LFLFCLAQILMGISNLERITLFH*SIWSVP
Trigger: AGGCACTGACCATATTGATCAGTGGAATAAAGTTAT...TCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAAAACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR GCA 90 bp AACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTACAATCATCCCAGACAAGAAAGAACTGTATCAAATaGAGCACAAACAATCCCTTG +
Preference number: 4 (lower is better)
Translates to: NLKLYRAVKLNVQSSQTRKNCIK*STNNPL
Trigger: CAAGGGATTGTTTGTGCTGCATTTGATACAGTTCTT...TCTTGTCTGGGATGATTGTACATTCAGCTTTACTGCACGATACAATTTTAAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp GCACGCTCGCCTCTACCTGGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCGTTTCAGACACGGACTaGGGGTGGGCAAGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: ARSPLPGGRWPFQETLHTVSDTD*GWARGP
Trigger: AGGGCCCCTTGCCCACCCCAAGTCCGTGTCTGAAAC...GGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGGTTTCAGACACGGACTaGGGGTGGGCAAGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: RWPFQETLHTVTGSICGKVSDTD*GWARGP
Trigger: AGGGCCCCTTGCCCACCCCAAGTCCGTGTCTGAAAC...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGAGCACAAACAATCCCTaGGGCCCCAGAGCCAATTGG +
Preference number: 5 (lower is better)
Translates to: LHTVTGSICGKWLAECTESTNNP*GPRANW
Trigger: CCAATTGGCTCTGGGGCCCAAGGGATTGTTTGTGCT...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCTCGCGCATTTTCAACCTCCTGGGCATCATAAATTaGAGGTGGTGGGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LPGREHHTVQGSSRIFNLLGIIN*RWWGFC
Trigger: GCAGAAGCCCCACCACCTCAAATTTATGATGCCCAG...GAGGTTGAAAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp GCACGCTCGCCTCTACCTGGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCCTCTGGACTCTGCCCTaGAAACTGAGACCTGGACAT +
Preference number: 5 (lower is better)
Translates to: ARSPLPGGRWPFQETLHTLWTLP*KLRPGH
Trigger: ATGTCCAGGTCTCAGTTTCAAGGGCAGAGTCCAGAG...GGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGAGCATTAAATGCGGGTaGAAGCAGCACCCGCTCCGT +
Preference number: 5 (lower is better)
Translates to: RWPFQETLHTVTGSICGKSIKCG*KQHPLR
Trigger: ACGGAGCGGGTGCTGCTTCAACCCGCATTTAATGCT...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp GGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTAGCATTAAATGCGGGTaGAAGCAGCACCCGCTCCGT +
Preference number: 5 (lower is better)
Translates to: GGRWPFQETLHTVTGSICSIKCG*KQHPLR
Trigger: ACGGAGCGGGTGCTGCTTCAACCCGCATTTAATGCT...ACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CTCGTCCCCCGTCCACGTCTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCAATATGGTCAGTGCCTaGGAATATCACACAACCTTT +
Preference number: 5 (lower is better)
Translates to: LVPRPRLPGREHHTVQGSNMVSA*EYHTTF
Trigger: AAAGGTTGTGTGATATTCCAAGGCACTGACCATATT...GCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAGACGTGGACGGGGGACGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393360.7
ENST00000452135.7
CDS GCA 90 bp CACTTGAGCTGGCCCGTGATGCTGCGGCGGCTGACCGTCTTACCATaGAAGAGACTAACGTTCAGGGTCAGACTAACGATTCTGACGTTC +
Preference number: 5 (lower is better)
Translates to: HLSWPVMLRRLTVLP*KRLTFRVRLTILTF
Trigger: GAACGTCAGAATCGTTAGTCTGACCCTGAACGTTAGTCTCTTGCATGGTAAGACGGTCAGCCGCCGCAGCATCACGGGCCAGCTCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS CCA 90 bp CCATGGAGTGACAATGACACTGACTGGCCTCATCCTGCCAATGAATaGCAAGGCACTGCAATGATGGCGCCAAACAATCCCTTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: PWSDNDTDWPHPANE*QGTAMMAPNNPLGP
Trigger: GGGGCCCAAGGGATTGTTTGGCGCCATCATTGCAGTGCCTTGCCATTCATTGGCAGGATGAGGCCAGTCAGTGTCATTGTCACTCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR CAA 90 bp CTCCCGGGGAGGGAGCATCACACAGTGCAGGGCAGCTCGCGCATTTTCAACCTCTCTCTTTGCATGAGTTaGGTTCTGAAAAGGACGGCT +
Preference number: 5 (lower is better)
Translates to: LPGREHHTVQGSSRIFNLSLCMS*VLKRTA
Trigger: AGCCGTCCTTTTCAGAACCAAACTCATGCAAAGAGA...GAGGTTGAAAATGCGCGAGCTGCCCTGCACTGTGTGATGCTCCCTCCCCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS TCA 90 bp CAGGGTCAGACTAACGATTCTGACGTTCTGGGCTGGACACACAGTTaGAGTGAGACACCAAGGAAGAGATGGCCAGCCCAACCCCTCACA +
Preference number: 5 (lower is better)
Translates to: QGQTNDSDVLGWTHS*SETPRKRWPAQPLT
Trigger: TGTGAGGGGTTGGGCTGGCCATCTCTTCCTTGGTGTCTCACTTCAACTGTGTGTCCAGCCCAGAACGTCAGAATCGTTAGTCTGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR CAA 90 bp CCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGAGCACAAACAATCCCTaGGGCCCCAGAGCCAATTGG +
Preference number: 5 (lower is better)
Translates to: PSTPKHFRPTEVRVPSMLSTNNP*GPRANW
Trigger: CCAATTGGCTCTGGGGCCCAAGGGATTGTTTGTGCT...CAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGGGACGGCTTAGTTTCTaGACTGCAACATTTATCCCA +
Preference number: 5 (lower is better)
Translates to: LHTVTGSICGKWLAECTEGRLSF*TATFIP
Trigger: TGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTCC...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp GCACGCTCGCCTCTACCTGGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCTCTCTTTGCATGAGTTaGGTTCTGAAAAGGACGGCT +
Preference number: 5 (lower is better)
Translates to: ARSPLPGGRWPFQETLHTSLCMS*VLKRTA
Trigger: AGCCGTCCTTTTCAGAACCAAACTCATGCAAAGAGA...GGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp ACAGTCTGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGAGCACAAACAATCCCTaGGGCCCCAGAGCCAATTGG +
Preference number: 5 (lower is better)
Translates to: TVWSGFYDFVLVSARVSRSTNNP*GPRANW
Trigger: CCAATTGGCTCTGGGGCCCAAGGGATTGTTTGTGCT...CCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCAGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR CAA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGGGACGGCTTAGTTTCTaGACTGCAACATTTATCCCA +
Preference number: 5 (lower is better)
Translates to: RWPFQETLHTVTGSICGKGRLSF*TATFIP
Trigger: TGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTCC...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTCTCTTTGCATGAGTTaGGTTCTGAAAAGGACGGCT +
Preference number: 5 (lower is better)
Translates to: RWPFQETLHTVTGSICGKSLCMS*VLKRTA
Trigger: AGCCGTCCTTTTCAGAACCAAACTCATGCAAAGAGA...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp GGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTTCTACAGAGATCCGCTaGTCAGGATCAATCACTAAC +
Preference number: 5 (lower is better)
Translates to: GGRWPFQETLHTVTGSICSTEIR*SGSITN
Trigger: GTTAGTGATTGATCCTGACAAGCGGATCTCTGTAGA...ACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp ACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTCTCTGGACTCTGCCCTaGAAACTGAGACCTGGACAT +
Preference number: 5 (lower is better)
Translates to: TPKHFRPTEVRVPSMLTGLWTLP*KLRPGH
Trigger: ATGTCCAGGTCTCAGTTTCAAGGGCAGAGTCCAGAG...ACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGGTTTCAGACACGGACTaGGGGTGGGCAAGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: LSGLSRARHCVSYMQNMEVSDTD*GWARGP
Trigger: AGGGCCCCTTGCCCACCCCAAGTCCGTGTCTGAAAC...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS CCA 90 bp CAGCATCCCTTCCTGGTTAATCCATGGAGTGACAATGACACTGACTaGCCTCATCCTGCCAATGAATGGCAAGGCACTGCAATGATGGCG +
Preference number: 5 (lower is better)
Translates to: QHPFLVNPWSDNDTD*PHPANEWQGTAMMA
Trigger: CGCCATCATTGCAGTGCCTTGCCATTCATTGGCAGGATGAGGCCAGTCAGTGTCATTGTCACTCCATGGATTAACCAGGAAGGGATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR CAA 90 bp GGGCCAAGGTCGCGGGGAAGGATACGGTCAGTGCCTTGGAATATCACACAACCTTCTCTTTGCATGAGTTaGGTTCTGAAAAGGACGGCT +
Preference number: 5 (lower is better)
Translates to: GPRSRGRIRSVPWNITQPSLCMS*VLKRTA
Trigger: AGCCGTCCTTTTCAGAACCAAACTCATGCAAAGAGA...AGGTTGTGTGATATTCCAAGGCACTGACCGTATCCTTCCCCGCGACCTTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539014.5
CDS-3UTR CAA 90 bp CGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGCAGCACCCGCTCCTGGGCATCATAAATTaGAGGTGGTGGGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: RGYRYLHSIKCGLKQHPLLGIIN*RWWGFC
Trigger: GCAGAAGCCCCACCACCTCAAATTTATGATGCCCAG...GAGCGGGTGCTGCTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCACAGAGTCTGAAAGGTCACACTaGTATTTATTACCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: LHTVTGSICGKWLAECTESERSH*YLLPGG
Trigger: TCCTCCTGGTAATAAATACAAGTGTGACCTTTCAGA...CTCTGTGCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp GAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGTGGCTCGCTGAATGCAATATGGTCAGTGCCTaGGAATATCACACAACCTTT +
Preference number: 5 (lower is better)
Translates to: ETLHTVTGSICGKWLAECNMVSA*EYHTTF
Trigger: AAAGGTTGTGTGATATTCCAAGGCACTGACCATATT...GCATTCAGCGAGCCACTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393360.7
ENST00000452135.7
CDS TCA 90 bp GGCCATCAGCTCCCAAATTCCTACGTTCAATTCAGACATATCTCCTaGACTCCAGGCTCATTCCTCTGCCTCCCTATTCCCAGTTCCACC +
Preference number: 5 (lower is better)
Translates to: GHQLPNSYVQFRHIS*TPGSFLCLPIPSST
Trigger: GGTGGAACTGGGAATAGGGAGGCAGAGGAATGAGCCTGGAGTTCAGGAGATATGTCTGAATTGAACGTAGGAATTTGGGAGCTGATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524170.5
CDS GCA 90 bp ATAAAACTGACTGTCACATTTACTGTCGCTCATGATGCAGCGTCCTaGAATATCCCGAAGGGTGGGCAAGTTTCAGATCCCTCGCCTCCC +
Preference number: 5 (lower is better)
Translates to: IKLTVTFTVAHDAAS*NIPKGGQVSDPSPP
Trigger: GGGAGGCGAGGGATCTGAAACTTGCCCACCCTTCGGGATATTGCAGGACGCTGCATCATGAGCGACAGTAAATGTGACAGTCAGTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000393362.8
ENST00000425491.6
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp AGATGGCCTTTCCAGGAAACCCTCCACACCGTCACGGGCTCCATCTGTGGCAAGATGGAGTTTTTCTATTaGGTTCCATCAACTCCCAAG +
Preference number: 5 (lower is better)
Translates to: RWPFQETLHTVTGSICGKMEFFY*VPSTPK
Trigger: CTTGGGAGTTGATGGAACCAAATAGAAAAACTCCAT...CTTGCCACAGATGGAGCCCGTGACGGTGTGGAGGGTTTCCTGGAAAGGCCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp GCACGCTCGCCTCTACCTGGTGGAAGATGGCCTTTCCAGGAAACCCTCCACACCAATTGGACCTGCATATaGGTGAAGTCAAAACTTACT +
Preference number: 5 (lower is better)
Translates to: ARSPLPGGRWPFQETLHTNWTCI*VKSKLT
Trigger: AGTAAGTTTTGACTTCACCAATATGCAGGTCCAATT...GGTGTGGAGGGTTTCCTGGAAAGGCCATCTTCCACCAGGTAGAGGCGAGCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452135.7
CDS GCA 90 bp ATAAAATCTGAGGCACGACATTGCTGCAAATCCAGGCAGCGAGACTaGAGGCCATTTCTCGGCTCTGTCCTTTTGCAGTTTCCCAATCCT +
Preference number: 5 (lower is better)
Translates to: IKSEARHCCKSRQRD*RPFLGSVLLQFPNP
Trigger: AGGATTGGGAAACTGCAAAAGGACAGAGCCGAGAAATGGCCTGCAGTCTCGCTGCCTGGATTTGCAGCAATGTCGTGCCTCAGATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520212.6
CDS CCA 90 bp TGCAAGAGACTAACGTTCAGGGTCAGACTAACGATTCTGACGTTCTaGGCTGGACACACAGTTGAAGTGAGACACCAAGGAAGAGATGGC +
Preference number: 5 (lower is better)
Translates to: CKRLTFRVRLTILTF*AGHTVEVRHQGRDG
Trigger: GCCATCTCTTCCTTGGTGTCTCACTTCAACTGTGTGTCCAGCCCAGAACGTCAGAATCGTTAGTCTGACCCTGAACGTTAGTCTCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR CAA 90 bp CCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGGGACGGCTTAGTTTCTaGACTGCAACATTTATCCCA +
Preference number: 5 (lower is better)
Translates to: PSTPKHFRPTEVRVPSMLGRLSF*TATFIP
Trigger: TGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTCC...CAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTTGTCTCTTTGCATGAGTTaGGTTCTGAAAAGGACGGCT +
Preference number: 5 (lower is better)
Translates to: PKHFRPTEVRVPSMLTGLSLCMS*VLKRTA
Trigger: AGCCGTCCTTTTCAGAACCAAACTCATGCAAAGAGA...CAAACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp TCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTAGCATTAAATGCGGGTaGAAGCAGCACCCGCTCCGT +
Preference number: 5 (lower is better)
Translates to: SSKQAILSGLSRARHCVSSIKCG*KQHPLR
Trigger: ACGGAGCGGGTGCTGCTTCAACCCGCATTTAATGCT...AGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp ACAGTCTGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGGGACGGCTTAGTTTCTaGACTGCAACATTTATCCCA +
Preference number: 5 (lower is better)
Translates to: TVWSGFYDFVLVSARVSRGRLSF*TATFIP
Trigger: TGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTCC...CCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCAGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR CAA 90 bp CCCTTGAAACTGAGACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGGATCTCTGGCTTGACTaGTTTTTATTTTGTCTCGCT +
Preference number: 5 (lower is better)
Translates to: PLKLRPGHGGDSRFLLGWDLWLD*FLFCLA
Trigger: AGCGAGACAAAATAAAAACAAGTCAAGCCAGAGATC...CCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGTCTCAGTTTCAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp ATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACTCTACAGAGATCCGCTaGTCAGGATCAATCACTAAC +
Preference number: 5 (lower is better)
Translates to: INSQAFQAHGGESSFNADSTEIR*SGSITN
Trigger: GTTAGTGATTGATCCTGACAAGCGGATCTCTGTAGA...GTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGCTGGGCATCATAAATTaGAGGTGGTGGGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LSGLSRARHCVSYMQNMELGIIN*RWWGFC
Trigger: GCAGAAGCCCCACCACCTCAAATTTATGATGCCCAG...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp TCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAAGTCCAAGCAAGCATTaGTGGTCACATGCACATACA +
Preference number: 5 (lower is better)
Translates to: STPKHFRPTEVRVPSMLTSPSKH*WSHAHT
Trigger: TGTATGTGCATGTGACCACAAATGCTTGCTTGGACT...TGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp GTTTTTCTATTTGGTTCCATCAACTCCCAAGCATTTCAGGCCCACGGAGGTGAGGATCTCTGGCTTGACTaGCGTTCTCTTTGTAGCCCA +
Preference number: 5 (lower is better)
Translates to: VFLFGSINSQAFQAHGGEDLWLD*RSLCSP
Trigger: TGGGCTACAAAGAGAACGCAAGTCAAGCCAGAGATC...CTCACCTCCGTGGGCCTGAAATGCTTGGGAGTTGATGGAACCAAATAGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000347470.8
CDS-3UTR CAA 90 bp TGGAGTGGATTTTACGACTTTGTCCTCGTGAGCGCTCGTGTAAGCAGGTGGTCAGATACGGTCAGTGCCTaGGAATATCACACAACCTTT +
Preference number: 5 (lower is better)
Translates to: WSGFYDFVLVSARVSRWSDTVSA*EYHTTF
Trigger: AAAGGTTGTGTGATATTCCAAGGCACTGACCGTATC...TGACCACCTGCTTACACGAGCGCTCACGAGGACAAAGTCGTAAAATCCACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS TCA 90 bp CCACTTGCACACTATAAAACTGACTGTCACATTTACTGTCGCTCATaGTGCAGCGTCCTGCAATATCCCGAAGGGTGGGCAAGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: PLAHYKTDCHIYCRS*CSVLQYPEGWASFR
Trigger: TCTGAAACTTGCCCACCCTTCGGGATATTGCAGGACGCTGCATCATGAGCGACAGTAAATGTGACAGTCAGTTTTATAGTGTGCAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000393362.8
ENST00000425491.6
ENST00000452135.7
ENST00000455781.5
ENST00000523583.1
CDS GCA 90 bp ATAAAACTGACTGTCACATTTACTGTCGCTCATGATGCAGCGTCCTaGAATATCCCGAAGGGTGGGCAAGTTTCAGATCCCACAACTTGG +
Preference number: 5 (lower is better)
Translates to: IKLTVTFTVAHDAAS*NIPKGGQVSDPTTW
Trigger: CCAAGTTGTGGGATCTGAAACTTGCCCACCCTTCGGGATATTGCAGGACGCTGCATCATGAGCGACAGTAAATGTGACAGTCAGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523583.1
CDS GCA 90 bp AATCCAGGCAGCGAGACTGCAGGCCATTTCTCGGCTCTGTCCTTTTaGAGTTTCCCAATCCTAACTATGAGTATAGACAAGAAGTCAGTC +
Preference number: 5 (lower is better)
Translates to: NPGSETAGHFSALSF*SFPILTMSIDKKSV
Trigger: GACTGACTTCTTGTCTATACTCATAGTTAGGATTGGGAAACTGCAAAAGGACAGAGCCGAGAAATGGCCTGCAGTCTCGCTGCCTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520212.6
CDS-3UTR CAA 90 bp CAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATAATTCTCAGCCCCAAAAGCACAAACAATCCCTaGGGCCCCAGAGCCAATTGG +
Preference number: 5 (lower is better)
Translates to: QDVHISVLVLAVIILSPKSTNNP*GPRANW
Trigger: CCAATTGGCTCTGGGGCCCAAGGGATTGTTTGTGCT...TTTGGGGCTGAGAATTATCACGGCTAAAACCAAGACACTTATGTGGACATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp TTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAATGGAGAGCAACAATAGCACAAACAATCCCTaGGGCCCCAGAGCCAATTGG +
Preference number: 5 (lower is better)
Translates to: FPEHSCEKECLPTMESNNSTNNP*GPRANW
Trigger: CCAATTGGCTCTGGGGCCCAAGGGATTGTTTGTGCT...ATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAGGACGGCTTAGTTTCTaGACTGCAACATTTATCCCA +
Preference number: 5 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTGRLSF*TATFIP
Trigger: TGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTCC...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CATTTTGTAAAATTCCACTCCAACGTTAGGCCATGGATGCAGGAACCTATCTGCCTGGGCATCATAAATTaGAGGTGGTGGGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: HFVKFHSNVRPWMQEPICLGIIN*RWWGFC
Trigger: GCAGAAGCCCCACCACCTCAAATTTATGATGCCCAG...GCAGATAGGTTCCTGCATCCATGGCCTAACGTTGGAGTGGAATTTTACAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTTGATGGAGTTTTTCTATTaGGTTCCATCAACTCCCAAG +
Preference number: 5 (lower is better)
Translates to: PKHFRPTEVRVPSMLTGLMEFFY*VPSTPK
Trigger: CTTGGGAGTTGATGGAACCAAATAGAAAAACTCCAT...CAAACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTTGGTCCACATAAGTGTCTaGGTTTTAGCCGTGATAATT +
Preference number: 5 (lower is better)
Translates to: PKHFRPTEVRVPSMLTGLVHISV*VLAVII
Trigger: AATTATCACGGCTAAAACCAAGACACTTATGTGGAC...CAAACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATAATTCTCAGCCCCAAAAGCATTAAATGCGGGTaGAAGCAGCACCCGCTCCGT +
Preference number: 5 (lower is better)
Translates to: QDVHISVLVLAVIILSPKSIKCG*KQHPLR
Trigger: ACGGAGCGGGTGCTGCTTCAACCCGCATTTAATGCT...TTTGGGGCTGAGAATTATCACGGCTAAAACCAAGACACTTATGTGGACATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGTCTCTTTGCATGAGTTaGGTTCTGAAAAGGACGGCT +
Preference number: 5 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMSLCMS*VLKRTA
Trigger: AGCCGTCCTTTTCAGAACCAAACTCATGCAAAGAGA...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp ACTCCCAAGCATTTCAGGCCCACGGAGGTGAGAGTTCCTTCAATGCTGACAGGTTCAATGCTGACAGGTTaGCTATTTCTAACCTATCAT +
Preference number: 5 (lower is better)
Translates to: TPKHFRPTEVRVPSMLTGSMLTG*LFLTYH
Trigger: ATGATAGGTTAGAAATAGCAAACCTGTCAGCATTGA...ACCTGTCAGCATTGAAGGAACTCTCACCTCCGTGGGCCTGAAATGCTTGGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp ATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTCTCTGGACTCTGCCCTaGAAACTGAGACCTGGACAT +
Preference number: 5 (lower is better)
Translates to: ILSSKQAILSGLSRARHCLWTLP*KLRPGH
Trigger: ATGTCCAGGTCTCAGTTTCAAGGGCAGAGTCCAGAG...ACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp TCAAGCAGCACTAAGCAAAACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTAGTTTCAGACACGGACTaGGGGTGGGCAAGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: SSSTKQNLKLYRAVKLNVVSDTD*GWARGP
Trigger: AGGGCCCCTTGCCCACCCCAAGTCCGTGTCTGAAAC...TACATTCAGCTTTACTGCACGATACAATTTTAAGTTTTGCTTAGTGCTGCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGAGCGCCAAACAATCCCTaGGGCCCCAGAGCCAATTGG +
Preference number: 5 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGAPNNP*GPRANW
Trigger: CCAATTGGCTCTGGGGCCCAAGGGATTGTTTGGCGC...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR CAA 90 bp TTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTGCGCCAAACAATCCCTaGGGCCCCAGAGCCAATTGG +
Preference number: 5 (lower is better)
Translates to: FILSRSDSDGNIQSGKSSAPNNP*GPRANW
Trigger: CCAATTGGCTCTGGGGCCCAAGGGATTGTTTGGCGC...AGAACTCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR CAA 90 bp CGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAGGACGGCTTAGTTTCTaGACTGCAACATTTATCCCA +
Preference number: 5 (lower is better)
Translates to: RPLKSFPEHSCEKECLPTGRLSF*TATFIP
Trigger: TGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTCC...TGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAGATCTCTGGCTTGACTaGTTTTTATTTTGTCTCGCT +
Preference number: 5 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTDLWLD*FLFCLA
Trigger: AGCGAGACAAAATAAAAACAAGTCAAGCCAGAGATC...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGTCTACAGAGATCCGCTaGTCAGGATCAATCACTAAC +
Preference number: 5 (lower is better)
Translates to: LSGLSRARHCVSYMQNMESTEIR*SGSITN
Trigger: GTTAGTGATTGATCCTGACAAGCGGATCTCTGTAGA...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CGTCCTCTGAAGAGTTTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACATCTACAGAGATCCGCTaGTCAGGATCAATCACTAAC +
Preference number: 5 (lower is better)
Translates to: RPLKSFPEHSCEKECLPTSTEIR*SGSITN
Trigger: GTTAGTGATTGATCCTGACAAGCGGATCTCTGTAGA...TGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAAACTCTTCAGAGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CGTGGTTATCGCTACTTACACAGCATTAAATGCGGGTTGAAGCAGCACCCGCTCTCAATGCTGACAGGTTaGCTATTTCTAACCTATCAT +
Preference number: 5 (lower is better)
Translates to: RGYRYLHSIKCGLKQHPLSMLTG*LFLTYH
Trigger: ATGATAGGTTAGAAATAGCAAACCTGTCAGCATTGA...GAGCGGGTGCTGCTTCAACCCGCATTTAATGCTGTGTAAGTAGCGATAACCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp TCTAAGCAGGCAATCCTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACAGTCCAAGCAAGCATTaGTGGTCACATGCACATACA +
Preference number: 5 (lower is better)
Translates to: SKQAILSGLSRARHCVSYSPSKH*WSHAHT
Trigger: TGTATGTGCATGTGACCACAAATGCTTGCTTGGACT...GTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAGGATTGCCTGCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGAGTCCAAGCAAGCATTaGTGGTCACATGCACATACA +
Preference number: 5 (lower is better)
Translates to: LSGLSRARHCVSYMQNMESPSKH*WSHAHT
Trigger: TGTATGTGCATGTGACCACAAATGCTTGCTTGGACT...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACATCTGAAAGGTCACACTaGTATTTATTACCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTSERSH*YLLPGG
Trigger: TCCTCCTGGTAATAAATACAAGTGTGACCTTTCAGA...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS TCA 90 bp GTGCATGCTTCCCAGTGGGAGTGGGAGAGAGACAATGATATAACGTaGGCGTTTCATTTAGTAAACAGGAAGAATCCTTCAGACGTAAGT +
Preference number: 5 (lower is better)
Translates to: VHASQWEWERDNDIT*AFHLVNRKNPSDVS
Trigger: ACTTACGTCTGAAGGATTCTTCCTGTTTACTAAATGAAACGCTCACGTTATATCATTGTCTCTCTCCCACTCCCACTGGGAAGCATGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520212.6
CDS-3UTR CAA 90 bp GGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACAAATGGATCTCTGGCTTGACTaGTTTTTATTTTGTCTCGCT +
Preference number: 5 (lower is better)
Translates to: GHGGDSRFLLGWKLSQQMDLWLD*FLFCLA
Trigger: AGCGAGACAAAATAAAAACAAGTCAAGCCAGAGATC...CATTTGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp ACCTGGACATGGGGGAGACAGTCGTTTCCTTCTTGGCTGGAAACTAAGTCAACATCAATGCTGACAGGTTaGCTATTTCTAACCTATCAT +
Preference number: 5 (lower is better)
Translates to: TWTWGRQSFPSWLETKSTSMLTG*LFLTYH
Trigger: ATGATAGGTTAGAAATAGCAAACCTGTCAGCATTGA...TGTTGACTTAGTTTCCAGCCAAGAAGGAAACGACTGTCTCCCCCATGTCCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp CATTTTGTAAAATTCCACTCCAACGTTAGGCCATGGATGCAGGAACCTATCTGCAGTCCAAGCAAGCATTaGTGGTCACATGCACATACA +
Preference number: 5 (lower is better)
Translates to: HFVKFHSNVRPWMQEPICSPSKH*WSHAHT
Trigger: TGTATGTGCATGTGACCACAAATGCTTGCTTGGACT...GCAGATAGGTTCCTGCATCCATGGCCTAACGTTGGAGTGGAATTTTACAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp ATCTCTAGTGAGCATTTTGTAAAATTCCACTCCAACGTTAGGCCATGGATGCAGTCTACAGAGATCCGCTaGTCAGGATCAATCACTAAC +
Preference number: 5 (lower is better)
Translates to: ISSEHFVKFHSNVRPWMQSTEIR*SGSITN
Trigger: GTTAGTGATTGATCCTGACAAGCGGATCTCTGTAGA...CTGCATCCATGGCCTAACGTTGGAGTGGAATTTTACAAAATGCTCACTAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTTCTACAGAGATCCGCTaGTCAGGATCAATCACTAAC +
Preference number: 5 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSSTEIR*SGSITN
Trigger: GTTAGTGATTGATCCTGACAAGCGGATCTCTGTAGA...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR CAA 90 bp GACAGTTTAAAGAAAACAAGATGTCCACATAAGTGTCTTGGTTTTAGCCGTGATCTGGGCATCATAAATTaGAGGTGGTGGGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: DSLKKTRCPHKCLGFSRDLGIIN*RWWGFC
Trigger: GCAGAAGCCCCACCACCTCAAATTTATGATGCCCAG...ATCACGGCTAAAACCAAGACACTTATGTGGACATCTTGTTTTCTTTAAACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp TTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTCTGGGCATCATAAATTaGAGGTGGTGGGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: FILSRSDSDGNIQSGKSSLGIIN*RWWGFC
Trigger: GCAGAAGCCCCACCACCTCAAATTTATGATGCCCAG...AGAACTCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR CAA 90 bp CTATCAGGTCTGAGTAGGGCAAGGCATTGTGTTTCTTACATGCAGAACATGGAGGTCCACATAAGTGTCTaGGTTTTAGCCGTGATAATT +
Preference number: 5 (lower is better)
Translates to: LSGLSRARHCVSYMQNMEVHISV*VLAVII
Trigger: AATTATCACGGCTAAAACCAAGACACTTATGTGGAC...CTCCATGTTCTGCATGTAAGAAACACAATGCCTTGCCCTACTCAGACCTGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp GATTCTGATGGGAATATCCAATCTGGAAAGAGTTCTTCAAATTTGATTCCAGGATATCAAATGCAGCACTaGAGCTGGCCCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: DSDGNIQSGKSSSNLIPGYQMQH*SWPVML
Trigger: CAGCATCACGGGCCAGCTCAAGTGCTGCATTTGATA...TCCTGGAATCAAATTTGAAGAACTCTTTCCAGATTGGATATTCCCATCAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR CAA 90 bp CATTTTGTAAAATTCCACTCCAACGTTAGGCCATGGATGCAGGAACCTATCTGCTCTGAAAGGTCACACTaGTATTTATTACCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: HFVKFHSNVRPWMQEPICSERSH*YLLPGG
Trigger: TCCTCCTGGTAATAAATACAAGTGTGACCTTTCAGA...GCAGATAGGTTCCTGCATCCATGGCCTAACGTTGGAGTGGAATTTTACAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp TTGTTTTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGATATCAAATGCAGCACTaGAGCTGGCCCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: LFLFCLAQILMGISNLERYQMQH*SWPVML
Trigger: CAGCATCACGGGCCAGCTCAAGTGCTGCATTTGATA...TCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR CAA 90 bp TTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAATGGAGAGCAACAATCACCAATACTCTGAATaGGACCTGCATATTGGTGAA +
Preference number: 5 (lower is better)
Translates to: FPEHSCEKECLPTMESNNHQYSE*DLHIGE
Trigger: TTCACCAATATGCAGGTCCAATTCAGAGTATTGGTG...ATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452135.7
CDS TCA 90 bp GTGAGCGTTTCATTTAGTAAACAGGAAGAATCCTTCAGACGTAAGTaGACACGACTCATATCAGAGTCTCATGATCATACAACTACCTGG +
Preference number: 5 (lower is better)
Translates to: VSVSFSKQEESFRRK*TRLISESHDHTTTW
Trigger: CCAGGTAGTTGTATGATCATGAGACTCTGATATGAGTCGTGTTCACTTACGTCTGAAGGATTCTTCCTGTTTACTAAATGAAACGCTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520212.6
CDS-3UTR CAA 90 bp ACAGAGATCCGCTTGTCAGGATCAATCACTAACATTTTTGATAACAGATCTCTGGGACGGCTTAGTTTCTaGACTGCAACATTTATCCCA +
Preference number: 5 (lower is better)
Translates to: TEIRLSGSITNIFDNRSLGRLSF*TATFIP
Trigger: TGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTCC...CAGAGATCTGTTATCAAAAATGTTAGTGATTGATCCTGACAAGCGGATCTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR CAA 90 bp TCTCTTTCACTTAGGTCCTTTGTAATGTGCTTCAGTTCTTACTTTGGGGGAAAAGGACGGCTTAGTTTCTaGACTGCAACATTTATCCCA +
Preference number: 5 (lower is better)
Translates to: SLSLRSFVMCFSSYFGGKGRLSF*TATFIP
Trigger: TGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTCC...TTTTCCCCCAAAGTAAGAACTGAAGCACATTACAAAGGACCTAAGTGAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR CAA 90 bp TTCCCAGAACATTCTTGTGAAAAGGAATGCCTCCCAACAATGGAGAGCAACAATTCTGAAAGGTCACACTaGTATTTATTACCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: FPEHSCEKECLPTMESNNSERSH*YLLPGG
Trigger: TCCTCCTGGTAATAAATACAAGTGTGACCTTTCAGA...ATTGTTGCTCTCCATTGTTGGGAGGCATTCCTTTTCACAAGAATGTTCTGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp AGGATCTTCAGGGTGCAGTCTGATTTCACAACAATGTTGCTAGGCTTCAAATCTAATATGGTCAGTGCCTaGGAATATCACACAACCTTT +
Preference number: 5 (lower is better)
Translates to: RIFRVQSDFTTMLLGFKSNMVSA*EYHTTF
Trigger: AAAGGTTGTGTGATATTCCAAGGCACTGACCATATT...AGATTTGAAGCCTAGCAACATTGTTGTGAAATCAGACTGCACCCTGAAGATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS-3UTR CAA 90 bp TCTCTTTCACTTAGGTCCTTTGTAATGTGCTTCAGTTCTTACTTTGGGGGAAAAGATACGGTCAGTGCCTaGGAATATCACACAACCTTT +
Preference number: 5 (lower is better)
Translates to: SLSLRSFVMCFSSYFGGKDTVSA*EYHTTF
Trigger: AAAGGTTGTGTGATATTCCAAGGCACTGACCGTATC...TTTTCCCCCAAAGTAAGAACTGAAGCACATTACAAAGGACCTAAGTGAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR CAA 90 bp CTTTCACTTAGGTCCTTTGTAATGTGCTTCAGTTCTTACTTTGGGGGAAAATATTCTCTTTGCATGAGTTaGGTTCTGAAAAGGACGGCT +
Preference number: 5 (lower is better)
Translates to: LSLRSFVMCFSSYFGGKYSLCMS*VLKRTA
Trigger: AGCCGTCCTTTTCAGAACCAAACTCATGCAAAGAGA...ATATTTTCCCCCAAAGTAAGAACTGAAGCACATTACAAAGGACCTAAGTGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425491.6
ENST00000539014.5
CDS-3UTR CAA 90 bp GACATATTCTGCCTCATTTTATCATCTAAGCAGGCAATCCTATCAGGTCTGAGTATGGAGTTTTTCTATTaGGTTCCATCAACTCCCAAG +
Preference number: 5 (lower is better)
Translates to: DIFCLILSSKQAILSGLSMEFFY*VPSTPK
Trigger: CTTGGGAGTTGATGGAACCAAATAGAAAAACTCCAT...ACTCAGACCTGATAGGATTGCCTGCTTAGATGATAAAATGAGGCAGAATATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp TTGTTTTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGATCTCTTTGCATGAGTTaGGTTCTGAAAAGGACGGCT +
Preference number: 5 (lower is better)
Translates to: LFLFCLAQILMGISNLERSLCMS*VLKRTA
Trigger: AGCCGTCCTTTTCAGAACCAAACTCATGCAAAGAGA...TCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR CAA 90 bp TTGTTTTTATTTTGTCTCGCTCAGATTCTGATGGGAATATCCAATCTGGAAAGAGATCTCTGGCTTGACTaGTTTTTATTTTGTCTCGCT +
Preference number: 5 (lower is better)
Translates to: LFLFCLAQILMGISNLERDLWLD*FLFCLA
Trigger: AGCGAGACAAAATAAAAACAAGTCAAGCCAGAGATC...TCTTTCCAGATTGGATATTCCCATCAGAATCTGAGCGAGACAAAATAAAAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000397072.7
CDS-3UTR CAA 90 bp AACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTACAATCATCCCAGACAAGAATGGAGTTTTTCTATTaGGTTCCATCAACTCCCAAG +
Preference number: 5 (lower is better)
Translates to: NLKLYRAVKLNVQSSQTRMEFFY*VPSTPK
Trigger: CTTGGGAGTTGATGGAACCAAATAGAAAAACTCCAT...TCTTGTCTGGGATGATTGTACATTCAGCTTTACTGCACGATACAATTTTAAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS-3UTR CAA 90 bp TCAAGCAGCACTAAGCAAAACTTAAAATTGTATCGTGCAGTAAAGCTGAATGTAGTCCACATAAGTGTCTaGGTTTTAGCCGTGATAATT +
Preference number: 5 (lower is better)
Translates to: SSSTKQNLKLYRAVKLNVVHISV*VLAVII
Trigger: AATTATCACGGCTAAAACCAAGACACTTATGTGGAC...TACATTCAGCTTTACTGCACGATACAATTTTAAGTTTTGCTTAGTGCTGCTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343111.10
ENST00000393360.7
ENST00000452135.7
ENST00000455781.5
CDS GCA 72 bp TGGCCCGTGATGCTGCGGCGGCTGACCGTCTTACCATaGAAGAGACTAACGTTCAGGGTCAGACTAACGATT +
Preference number: 6 (lower is better)
Translates to: WPVMLRRLTVLP*KRLTFRVRLTI
Trigger: AATCGTTAGTCTGACCCTGAACGTTAGTCTCTTGCATGGTAAGACGGTCAGCCGCCGCAGCATCACGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS GCA 72 bp GAGGCACGACATTGCTGCAAATCCAGGCAGCGAGACTaGAGGCCATTTCTCGGCTCTGTCCTTTTGCAGTTT +
Preference number: 6 (lower is better)
Translates to: EARHCCKSRQRD*RPFLGSVLLQF
Trigger: AAACTGCAAAAGGACAGAGCCGAGAAATGGCCTGCAGTCTCGCTGCCTGGATTTGCAGCAATGTCGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520212.6
CDS CCA 72 bp GACAATGACACTGACTGGCCTCATCCTGCCAATGAATaGCAAGGCACTGCAATGATGGCGCCAAACAATCCC +
Preference number: 6 (lower is better)
Translates to: DNDTDWPHPANE*QGTAMMAPNNP
Trigger: GGGATTGTTTGGCGCCATCATTGCAGTGCCTTGCCATTCATTGGCAGGATGAGGCCAGTCAGTGTCATTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS TCA 72 bp ACTAACGATTCTGACGTTCTGGGCTGGACACACAGTTaGAGTGAGACACCAAGGAAGAGATGGCCAGCCCAA +
Preference number: 6 (lower is better)
Translates to: TNDSDVLGWTHS*SETPRKRWPAQ
Trigger: TTGGGCTGGCCATCTCTTCCTTGGTGTCTCACTTCAACTGTGTGTCCAGCCCAGAACGTCAGAATCGTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS GCA 72 bp ACTGTCACATTTACTGTCGCTCATGATGCAGCGTCCTaGAATATCCCGAAGGGTGGGCAAGTTTCAGATCCC +
Preference number: 6 (lower is better)
Translates to: TVTFTVAHDAAS*NIPKGGQVSDP
Trigger: GGGATCTGAAACTTGCCCACCCTTCGGGATATTGCAGGACGCTGCATCATGAGCGACAGTAAATGTGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000393362.8
ENST00000425491.6
ENST00000452135.7
ENST00000455781.5
ENST00000523583.1
CDS CAA 72 bp TATCCCGAAGGGTGGGCAAGTTTCAGATCCCACAACTaGGGTGGATCTCAGGGGCAGGATAGTCAACGAAAA +
Preference number: 6 (lower is better)
Translates to: YPEGWASFRSHN*GGSQGQDSQRK
Trigger: TTTTCGTTGACTATCCTGCCCCTGAGATCCACCCAAGTTGTGGGATCTGAAACTTGCCCACCCTTCGGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523583.1
CDS CCA 72 bp CTAACGTTCAGGGTCAGACTAACGATTCTGACGTTCTaGGCTGGACACACAGTTGAAGTGAGACACCAAGGA +
Preference number: 6 (lower is better)
Translates to: LTFRVRLTILTF*AGHTVEVRHQG
Trigger: TCCTTGGTGTCTCACTTCAACTGTGTGTCCAGCCCAGAACGTCAGAATCGTTAGTCTGACCCTGAACGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393362.8
ENST00000397072.7
CDS TCA 72 bp CACTATAAAACTGACTGTCACATTTACTGTCGCTCATaGTGCAGCGTCCTGCAATATCCCGAAGGGTGGGCA +
Preference number: 6 (lower is better)
Translates to: HYKTDCHIYCRS*CSVLQYPEGWA
Trigger: TGCCCACCCTTCGGGATATTGCAGGACGCTGCATCATGAGCGACAGTAAATGTGACAGTCAGTTTTATAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343111.10
ENST00000347470.8
ENST00000393360.7
ENST00000393362.8
ENST00000425491.6
ENST00000452135.7
ENST00000455781.5
ENST00000523583.1
CDS TCA 72 bp CTCCCAAATTCCTACGTTCAATTCAGACATATCTCCTaGACTCCAGGCTCATTCCTCTGCCTCCCTATTCCC +
Preference number: 6 (lower is better)
Translates to: LPNSYVQFRHIS*TPGSFLCLPIP
Trigger: GGGAATAGGGAGGCAGAGGAATGAGCCTGGAGTTCAGGAGATATGTCTGAATTGAACGTAGGAATTTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524170.5
CDS CAA 90 bp AAATCCAGGCAGCGAGACTGCAGGCCATTTCTCGGCTCTGTCCTTTaGCAGTTTCCCAATCCTAACTATGAGTATAGACAAGAAGTCAGT +
Preference number: 6 (lower is better)
Translates to: KSRQRDCRPFLGSVL*QFPNPNYEYRQEVS
Trigger: ACTGACTTCTTGTCTATACTCATAGTTAGGATTGGGAAACTGCAAAAGGACAGAGCCGAGAAATGGCCTGCAGTCTCGCTGCCTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520212.6
CDS GCA 72 bp AGCGAGACTGCAGGCCATTTCTCGGCTCTGTCCTTTTaGAGTTTCCCAATCCTAACTATGAGTATAGACAAG +
Preference number: 6 (lower is better)
Translates to: SETAGHFSALSF*SFPILTMSIDK
Trigger: CTTGTCTATACTCATAGTTAGGATTGGGAAACTGCAAAAGGACAGAGCCGAGAAATGGCCTGCAGTCTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520212.6
CDS CAA 72 bp CAGCGAGACTGCAGGCCATTTCTCGGCTCTGTCCTTTaGCAGTTTCCCAATCCTAACTATGAGTATAGACAA +
Preference number: 6 (lower is better)
Translates to: QRDCRPFLGSVL*QFPNPNYEYRQ
Trigger: TTGTCTATACTCATAGTTAGGATTGGGAAACTGCAAAAGGACAGAGCCGAGAAATGGCCTGCAGTCTCGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520212.6
CDS TCA 72 bp GGCGCCGCATGCACAGTCTCTATGAATTATACCAGCTaGATGCAGATGTTTAATACCACAAAGCATCTGGTA +
Preference number: 6 (lower is better)
Translates to: GAACTVSMNYTS*MQMFNTTKHLV
Trigger: TACCAGATGCTTTGTGGTATTAAACATCTGCATTCAGCTGGTATAATTCATAGAGACTGTGCATGCGGCGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523135.1
CDS CAA 90 bp GAAGTCAGTCAGCTGGACTTTCTGAACTTTTCCTTGAGTCTTTCTTaGGGCCAAGAGTCCCATATTCCTATGTCTTTCCTTGCAAGATTC +
Preference number: 6 (lower is better)
Translates to: EVSQLDFLNFSLSLS*GQESHIPMSFLARF
Trigger: GAATCTTGCAAGGAAAGACATAGGAATATGGGACTCTTGGCCCAAAGAAAGACTCAAGGAAAAGTTCAGAAAGTCCAGCTGACTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520212.6
CDS TCA 72 bp TCCCAGTGGGAGTGGGAGAGAGACAATGATATAACGTaGGCGTTTCATTTAGTAAACAGGAAGAATCCTTCA +
Preference number: 6 (lower is better)
Translates to: SQWEWERDNDIT*AFHLVNRKNPS
Trigger: TGAAGGATTCTTCCTGTTTACTAAATGAAACGCTCACGTTATATCATTGTCTCTCTCCCACTCCCACTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520212.6
CDS CCA 72 bp CGACTCATATCAGAGTCTCATGATCATACAACTACCTaGTCATTAGAGGCTTCCACCACTATGAAGATCAGT +
Preference number: 6 (lower is better)
Translates to: RLISESHDHTTT*SLEASTTMKIS
Trigger: ACTGATCTTCATAGTGGTGGAAGCCTCTAATGACCAGGTAGTTGTATGATCATGAGACTCTGATATGAGTCG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520212.6
CDS CAA 72 bp CAGCTGGACTTTCTGAACTTTTCCTTGAGTCTTTCTTaGGGCCAAGAGTCCCATATTCCTATGTCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: QLDFLNFSLSLS*GQESHIPMSFL
Trigger: AAGGAAAGACATAGGAATATGGGACTCTTGGCCCAAAGAAAGACTCAAGGAAAAGTTCAGAAAGTCCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520212.6
CDS CCA 72 bp CAGGATCAATCACTAACATTTTTGATAACAGATCTCTaGCTTGACTTGCGTTCTCTTTGTAGCCCATACCCA +
Preference number: 6 (lower is better)
Translates to: QDQSLTFLITDL*LDLRSLCSPYP
Trigger: TGGGTATGGGCTACAAAGAGAACGCAAGTCAAGCCAGAGATCTGTTATCAAAAATGTTAGTGATTGATCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000347470.8
CDS TCA 72 bp TCATTTAGTAAACAGGAAGAATCCTTCAGACGTAAGTaGACACGACTCATATCAGAGTCTCATGATCATACA +
Preference number: 6 (lower is better)
Translates to: SFSKQEESFRRK*TRLISESHDHT
Trigger: TGTATGATCATGAGACTCTGATATGAGTCGTGTTCACTTACGTCTGAAGGATTCTTCCTGTTTACTAAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520212.6